BB938601 ( RCC11882 )

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[1][TOP]
>UniRef100_Q1SN01 High mobility group proteins HMG-I and HMG-Y; Linker histone,
           N-terminal n=1 Tax=Medicago truncatula
           RepID=Q1SN01_MEDTR
          Length = 422

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 61/106 (57%), Positives = 66/106 (62%)
 Frame = +1

Query: 1   RGRPPKPKPQQQQQQRNVLFVSLDTTTATATVPPPPTTTTTTVDPVRRRGRGRPPGTFRS 180
           RGRPPK KP      + V FVSLD        PPPPTT    V  V+R GRGRPPGTFRS
Sbjct: 124 RGRPPKHKPILIPNAQPV-FVSLD--------PPPPTTAVEPVLSVKR-GRGRPPGTFRS 173

Query: 181 KTLKSPGRPPKPKSVSNAGFKRRPSRPPKIQSQQPNVIPFAASILP 318
           K++K      KPKSVSN G KRRP RPPK QS    VIPFAA+  P
Sbjct: 174 KSIK------KPKSVSN-GLKRRPGRPPKTQSHPTTVIPFAAAPAP 212

[2][TOP]
>UniRef100_Q93YH8 HMG I/Y like protein n=1 Tax=Glycine max RepID=Q93YH8_SOYBN
          Length = 413

 Score = 79.7 bits (195), Expect = 9e-14
 Identities = 53/115 (46%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
 Frame = +1

Query: 1   RGRPPKPKPQQQQQQRNVLFVSLDTTTATATVPPPPTTTTTTVDPVRRRG-------RGR 159
           RGRPPK K  Q   +     ++L+   A  +    P        PV           RGR
Sbjct: 115 RGRPPKLK-SQPNTELTWPALALNDNPALQSAKRGPGRPKKIAGPVGVSPGPMVPGRRGR 173

Query: 160 PPGTFRSKTLKSPGRPPKPKSVS--NAGFKRRPSRPPKIQSQQPNVIPFAASILP 318
           PPGT RSK  K PGRPPKPKSVS  ++G KRRP RPPK +S   NVIPFAA + P
Sbjct: 174 PPGTGRSKLPKRPGRPPKPKSVSAISSGLKRRPGRPPKAES-NVNVIPFAAPVAP 227

[3][TOP]
>UniRef100_A9P7V9 High mobility group family n=1 Tax=Populus trichocarpa
           RepID=A9P7V9_POPTR
          Length = 478

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 26/129 (20%)
 Frame = +1

Query: 1   RGRPPKPKPQ----------QQQQQRNVLFVSLDTTTATATVPPPPTTTTTTVDPVRRR- 147
           RGRPPK K               Q +  L +++  T    +V  P   T++TV   R R 
Sbjct: 156 RGRPPKAKLNGLTPTPAPVLANGQAQTGLGLNVGVTAQPLSVGFPIDPTSSTVKKGRGRP 215

Query: 148 ---------------GRGRPPGTFRSKTLKSPGRPPKPKSVSNAGFKRRPSRPPKIQSQQ 282
                          G+GRPP T    + KSPGRP KPKS+ +A  K+ P RPPK Q  +
Sbjct: 216 KKVAVTEAGPLAVNKGKGRPPKTGPLGSKKSPGRPRKPKSLVDA--KKGPGRPPKNQ-LK 272

Query: 283 PNVIPFAAS 309
           P  +P+A +
Sbjct: 273 PVTVPYAVA 281

[4][TOP]
>UniRef100_B9T8C7 Histone h1/h5, putative n=1 Tax=Ricinus communis RepID=B9T8C7_RICCO
          Length = 435

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 43/128 (33%), Positives = 53/128 (41%), Gaps = 27/128 (21%)
 Frame = +1

Query: 1   RGRPPKPKPQ------QQQQQRNVLFVSLDTTTATATVPPPPTTTTTTVDPVR------- 141
           RGRPPKPKP+      Q   Q N   V +    + +T P       T + P         
Sbjct: 178 RGRPPKPKPEVVPSSIQPISQPNAASVMVPVGLSISTQPINSAPAATVIQPPNVGQPQMG 237

Query: 142 -RRGRGRPP-------------GTFRSKTLKSPGRPPKPKSVSNAGFKRRPSRPPKIQSQ 279
            +RGRGRP              G  R +  KS GRP K KSV   G K+ P R PK    
Sbjct: 238 VKRGRGRPKKVAGGGAAAAVLGGKRRGRPPKSAGRPKKLKSVGANGVKKGPKRLPK---- 293

Query: 280 QPNVIPFA 303
              V+P+A
Sbjct: 294 -SVVVPYA 300

[5][TOP]
>UniRef100_B9I2G1 High mobility group family n=1 Tax=Populus trichocarpa
           RepID=B9I2G1_POPTR
          Length = 369

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
 Frame = +1

Query: 103 PPTTTTTTVDP-VRRRGRGRPPGTFRSKTLKSPGRPPKPKSVSNAGFKRRPSRPPKIQSQ 279
           P     T   P V ++GRGRPP +    + KSPGRP KPKS+   G K+ P RPPK Q  
Sbjct: 223 PKKMVVTEAGPLVVKKGRGRPPNSGPLGSKKSPGRPRKPKSL--VGAKKGPGRPPKNQ-L 279

Query: 280 QPNVIPFAAS 309
           +P  +P+A +
Sbjct: 280 KPVTVPYAVA 289