BB938022 ( RCC11225 )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BB938022  RCC11225
         (279 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q708X1 RNA and export binding protein (Fragment) n=1 T...    93   8e-18
UniRef100_A7NZ48 Chromosome chr6 scaffold_3, whole genome shotgu...    90   7e-17
UniRef100_B9SZF6 RNA and export factor binding protein, putative...    84   5e-15
UniRef100_A5BY89 Putative uncharacterized protein n=1 Tax=Vitis ...    82   2e-14
UniRef100_B9HPJ8 Predicted protein n=1 Tax=Populus trichocarpa R...    76   1e-12
UniRef100_Q8L719 Putative uncharacterized protein At5g02530 n=1 ...    72   1e-11
UniRef100_Q9LZ49 Putative uncharacterized protein T22P11_120 n=1...    72   2e-11
UniRef100_B9NB27 Predicted protein (Fragment) n=1 Tax=Populus tr...    70   6e-11
UniRef100_A2XF57 Putative uncharacterized protein n=1 Tax=Oryza ...    70   7e-11
UniRef100_Q68VB5 ALY protein n=1 Tax=Nicotiana benthamiana RepID...    70   9e-11
UniRef100_Q10N90 Putative uncharacterized protein n=1 Tax=Oryza ...    70   9e-11
UniRef100_Q10N89 cDNA clone:002-103-H02, full insert sequence n=...    70   9e-11
UniRef100_Q0DSZ9 Os03g0278300 protein (Fragment) n=1 Tax=Oryza s...    70   9e-11
UniRef100_Q8L773 Transcriptional coactivator-like protein n=1 Ta...    69   2e-10
UniRef100_Q3E889 Putative uncharacterized protein At5g59950.2 n=...    69   2e-10
UniRef100_Q3E888 Putative uncharacterized protein At5g59950.3 n=...    69   2e-10
UniRef100_Q9FJE1 RNA and export factor binding protein 2-I-like ...    69   2e-10
UniRef100_Q8LCA6 Transcriptional coactivator-like protein n=1 Ta...    68   3e-10
UniRef100_B9T100 RNA and export factor binding protein, putative...    65   2e-09
UniRef100_Q68VB6 ALY protein n=1 Tax=Nicotiana benthamiana RepID...    64   5e-09
UniRef100_UPI0001868DE0 hypothetical protein BRAFLDRAFT_241366 n...    64   7e-09
UniRef100_Q1MSH0 ALY protein n=1 Tax=Nicotiana benthamiana RepID...    64   7e-09
UniRef100_A9SGU2 Predicted protein n=1 Tax=Physcomitrella patens...    64   7e-09
UniRef100_Q9C7U4 RNA and export factor binding protein, putative...    63   9e-09
UniRef100_Q94EH8 At1g66260/T6J19_1 n=1 Tax=Arabidopsis thaliana ...    63   9e-09
UniRef100_B9H3A7 Predicted protein (Fragment) n=1 Tax=Populus tr...    63   9e-09
UniRef100_A9TZS6 Predicted protein n=1 Tax=Physcomitrella patens...    63   9e-09
UniRef100_C5YL34 Putative uncharacterized protein Sb07g020860 n=...    63   1e-08
UniRef100_B4FF68 Putative uncharacterized protein n=1 Tax=Zea ma...    62   2e-08
UniRef100_Q6JAC7 Hin19 (Fragment) n=1 Tax=Nicotiana tabacum RepI...    62   3e-08
UniRef100_Q2QZ01 Os12g0100100 protein n=1 Tax=Oryza sativa Japon...    60   8e-08
UniRef100_B9GER3 Predicted protein n=1 Tax=Populus trichocarpa R...    60   8e-08
UniRef100_Q2RBS3 Os11g0100200 protein n=2 Tax=Oryza sativa RepID...    60   8e-08
UniRef100_C3Z710 Putative uncharacterized protein n=1 Tax=Branch...    60   8e-08
UniRef100_C5WPD6 Putative uncharacterized protein Sb01g039330 n=...    60   1e-07
UniRef100_A9RE63 Predicted protein n=1 Tax=Physcomitrella patens...    60   1e-07
UniRef100_B9GUT0 Predicted protein n=1 Tax=Populus trichocarpa R...    59   2e-07
UniRef100_Q9LF77 DIP1 protein n=1 Tax=Arabidopsis thaliana RepID...    59   2e-07
UniRef100_C1EAT1 Predicted protein n=1 Tax=Micromonas sp. RCC299...    59   2e-07
UniRef100_B8A280 Putative uncharacterized protein n=1 Tax=Zea ma...    58   4e-07
UniRef100_P35549 rRNA 2'-O-methyltransferase fibrillarin n=1 Tax...    58   4e-07
UniRef100_B9HTL2 Predicted protein n=1 Tax=Populus trichocarpa R...    57   5e-07
UniRef100_B6T346 Putative uncharacterized protein n=1 Tax=Zea ma...    57   5e-07
UniRef100_A7HAH7 Putative uncharacterized protein n=1 Tax=Anaero...    57   6e-07
UniRef100_C1EHI5 Predicted protein n=1 Tax=Micromonas sp. RCC299...    57   6e-07
UniRef100_A9S944 Predicted protein n=1 Tax=Physcomitrella patens...    57   6e-07
UniRef100_Q4RZP7 Chromosome 18 SCAF14786, whole genome shotgun s...    57   8e-07
UniRef100_C5XDI8 Putative uncharacterized protein Sb02g007020 n=...    57   8e-07
UniRef100_A5ATR5 Putative uncharacterized protein n=1 Tax=Vitis ...    57   8e-07
UniRef100_Q2HFP2 Putative uncharacterized protein n=1 Tax=Chaeto...    57   8e-07
UniRef100_O19031 Bactinecin 11 n=1 Tax=Ovis aries RepID=O19031_S...    56   1e-06
UniRef100_Q1MSG9 ALY protein n=1 Tax=Nicotiana benthamiana RepID...    56   1e-06
UniRef100_Q01FV4 Predicted RNA-binding protein (ISS) n=1 Tax=Ost...    56   1e-06
UniRef100_C1MJ03 Predicted protein n=1 Tax=Micromonas pusilla CC...    55   2e-06
UniRef100_B8BSG9 Predicted protein n=1 Tax=Thalassiosira pseudon...    55   2e-06
UniRef100_A2YJQ1 Putative uncharacterized protein n=1 Tax=Oryza ...    55   2e-06
UniRef100_UPI0001984C38 PREDICTED: hypothetical protein n=1 Tax=...    55   2e-06
UniRef100_UPI000180BF8C PREDICTED: similar to putative TCF coact...    55   2e-06
UniRef100_UPI0000DA34E6 PREDICTED: similar to THO complex subuni...    55   2e-06
UniRef100_UPI0000DA34E5 PREDICTED: similar to THO complex subuni...    55   2e-06
UniRef100_Q9FHP9 Genomic DNA, chromosome 5, TAC clone:K12B20 n=1...    55   2e-06
UniRef100_Q6NQ72 At5g37720 n=1 Tax=Arabidopsis thaliana RepID=Q6...    55   2e-06
UniRef100_A8MQ78 Uncharacterized protein At5g37720.2 n=1 Tax=Ara...    55   2e-06
UniRef100_A7PRD4 Chromosome chr14 scaffold_26, whole genome shot...    55   2e-06
UniRef100_Q64001 SmD homolog protein (Fragment) n=1 Tax=Mus sp. ...    55   3e-06
UniRef100_C1E061 Predicted protein n=1 Tax=Micromonas sp. RCC299...    55   3e-06
UniRef100_O08583-2 Isoform 2 of THO complex subunit 4 n=1 Tax=Mu...    55   3e-06
UniRef100_O08583 THO complex subunit 4 n=1 Tax=Mus musculus RepI...    55   3e-06
UniRef100_UPI0000F2C03B PREDICTED: hypothetical protein n=1 Tax=...    54   4e-06
UniRef100_UPI0000E24B79 PREDICTED: hypothetical protein n=1 Tax=...    54   4e-06
UniRef100_UPI00006D6436 PREDICTED: THO complex 4 n=1 Tax=Macaca ...    54   4e-06
UniRef100_UPI0000ECA4E2 THO complex subunit 4 (Tho4) (Ally of AM...    54   4e-06
UniRef100_B9EQF6 THO complex subunit 4 n=1 Tax=Salmo salar RepID...    54   4e-06
UniRef100_B5XA68 THO complex subunit 4 n=1 Tax=Salmo salar RepID...    54   4e-06
UniRef100_UPI0001796A76 PREDICTED: similar to THO complex subuni...    54   5e-06
UniRef100_UPI00005A1A0F PREDICTED: similar to THO complex subuni...    54   5e-06
UniRef100_Q86V81 THO complex subunit 4 n=2 Tax=Homo sapiens RepI...    54   5e-06
UniRef100_UPI0000EB1E5F UPI0000EB1E5F related cluster n=1 Tax=Ca...    54   5e-06
UniRef100_Q7XHQ6 Putative RNA and export factor binding protein ...    54   5e-06
UniRef100_Q7EY69 Os08g0427900 protein n=1 Tax=Oryza sativa Japon...    54   5e-06
UniRef100_B9G106 Putative uncharacterized protein n=2 Tax=Oryza ...    54   5e-06
UniRef100_B6T0T9 RNA and export factor-binding protein 2 n=1 Tax...    54   5e-06
UniRef100_A3BI27 Putative uncharacterized protein n=1 Tax=Oryza ...    54   5e-06
UniRef100_Q3T0I4 THO complex subunit 4 n=1 Tax=Bos taurus RepID=...    54   5e-06
UniRef100_UPI0000E812F6 PREDICTED: hypothetical protein n=1 Tax=...    54   7e-06
UniRef100_UPI0000E469DB PREDICTED: similar to MGC84169 protein n...    54   7e-06
UniRef100_B9EQ17 THO complex subunit 4 n=1 Tax=Salmo salar RepID...    54   7e-06
UniRef100_A7EA74 Putative uncharacterized protein n=1 Tax=Sclero...    54   7e-06
UniRef100_C1N9U6 Predicted protein n=1 Tax=Micromonas pusilla CC...    53   9e-06
UniRef100_C1MP43 Methyl binding domain protein n=1 Tax=Micromona...    53   9e-06
UniRef100_C1EBZ3 Predicted protein n=1 Tax=Micromonas sp. RCC299...    53   9e-06
UniRef100_A4S2I2 Predicted protein n=1 Tax=Ostreococcus lucimari...    53   9e-06
UniRef100_A4S0A2 Predicted protein n=1 Tax=Ostreococcus lucimari...    53   9e-06
UniRef100_A9V7R3 Predicted protein n=1 Tax=Monosiga brevicollis ...    53   9e-06
UniRef100_A4I464 Fibrillarin, putative n=1 Tax=Leishmania infant...    53   9e-06
UniRef100_Q28FB9 THO complex subunit 4 n=1 Tax=Xenopus (Silurana...    53   9e-06
graphical overview:
alignment
UniRef100_Q708X1 UniRef100_Q708X1 UniRef100_A7NZ48 UniRef100_A7NZ48 UniRef100_B9SZF6 UniRef100_B9SZF6 UniRef100_A5BY89 UniRef100_A5BY89 UniRef100_B9HPJ8 UniRef100_B9HPJ8 UniRef100_Q8L719 UniRef100_Q8L719 UniRef100_Q9LZ49 UniRef100_Q9LZ49 UniRef100_B9NB27 UniRef100_B9NB27 UniRef100_A2XF57 UniRef100_A2XF57 UniRef100_Q68VB5 UniRef100_Q68VB5 UniRef100_Q10N90 UniRef100_Q10N90 UniRef100_Q10N89 UniRef100_Q10N89 UniRef100_Q0DSZ9 UniRef100_Q0DSZ9 UniRef100_Q8L773 UniRef100_Q8L773 UniRef100_Q3E889 UniRef100_Q3E889 UniRef100_Q3E888 UniRef100_Q3E888 UniRef100_Q9FJE1 UniRef100_Q9FJE1 UniRef100_Q8LCA6 UniRef100_Q8LCA6 UniRef100_B9T100 UniRef100_B9T100 UniRef100_Q68VB6 UniRef100_Q68VB6 UniRef100_UPI0001868DE0 UniRef100_UPI0001868DE0 UniRef100_Q1MSH0 UniRef100_Q1MSH0 UniRef100_A9SGU2 UniRef100_A9SGU2 UniRef100_Q9C7U4 UniRef100_Q9C7U4 UniRef100_Q94EH8 UniRef100_Q94EH8 UniRef100_B9H3A7 UniRef100_B9H3A7 UniRef100_A9TZS6 UniRef100_A9TZS6 UniRef100_C5YL34 UniRef100_C5YL34 UniRef100_B4FF68 UniRef100_B4FF68 UniRef100_Q6JAC7 UniRef100_Q6JAC7 UniRef100_Q2QZ01 UniRef100_Q2QZ01 UniRef100_B9GER3 UniRef100_B9GER3 UniRef100_Q2RBS3 UniRef100_Q2RBS3 UniRef100_C3Z710 UniRef100_C3Z710 UniRef100_C5WPD6 UniRef100_C5WPD6 UniRef100_A9RE63 UniRef100_A9RE63 UniRef100_B9GUT0 UniRef100_B9GUT0 UniRef100_Q9LF77 UniRef100_Q9LF77 UniRef100_C1EAT1 UniRef100_C1EAT1 UniRef100_B8A280 UniRef100_B8A280 UniRef100_P35549 UniRef100_P35549 UniRef100_B9HTL2 UniRef100_B9HTL2 UniRef100_B6T346 UniRef100_B6T346 UniRef100_A7HAH7 UniRef100_A7HAH7 UniRef100_A7HAH7 UniRef100_A7HAH7 UniRef100_C1EHI5 UniRef100_C1EHI5 UniRef100_A9S944 UniRef100_A9S944 UniRef100_Q4RZP7 UniRef100_Q4RZP7 UniRef100_C5XDI8 UniRef100_C5XDI8 UniRef100_A5ATR5 UniRef100_A5ATR5 UniRef100_Q2HFP2 UniRef100_Q2HFP2 UniRef100_O19031 UniRef100_O19031 UniRef100_O19031 UniRef100_O19031 UniRef100_Q1MSG9 UniRef100_Q1MSG9 UniRef100_Q01FV4 UniRef100_Q01FV4 UniRef100_C1MJ03 UniRef100_C1MJ03 UniRef100_B8BSG9 UniRef100_B8BSG9 UniRef100_A2YJQ1 UniRef100_A2YJQ1 UniRef100_UPI0001984C38 UniRef100_UPI0001984C38 UniRef100_UPI000180BF8C UniRef100_UPI000180BF8C UniRef100_UPI0000DA34E6 UniRef100_UPI0000DA34E6 UniRef100_UPI0000DA34E5 UniRef100_UPI0000DA34E5 UniRef100_Q9FHP9 UniRef100_Q9FHP9 UniRef100_Q6NQ72 UniRef100_Q6NQ72 UniRef100_A8MQ78 UniRef100_A8MQ78 UniRef100_A7PRD4 UniRef100_A7PRD4 UniRef100_Q64001 UniRef100_Q64001 UniRef100_Q64001 UniRef100_Q64001 UniRef100_C1E061 UniRef100_C1E061 UniRef100_O08583-2 UniRef100_O08583-2 UniRef100_O08583 UniRef100_O08583 UniRef100_UPI0000F2C03B UniRef100_UPI0000F2C03B UniRef100_UPI0000E24B79 UniRef100_UPI0000E24B79 UniRef100_UPI00006D6436 UniRef100_UPI00006D6436 UniRef100_UPI0000ECA4E2 UniRef100_UPI0000ECA4E2 UniRef100_B9EQF6 UniRef100_B9EQF6 UniRef100_B5XA68 UniRef100_B5XA68 UniRef100_UPI0001796A76 UniRef100_UPI0001796A76 UniRef100_UPI00005A1A0F UniRef100_UPI00005A1A0F UniRef100_Q86V81 UniRef100_Q86V81 UniRef100_UPI0000EB1E5F UniRef100_UPI0000EB1E5F UniRef100_Q7XHQ6 UniRef100_Q7XHQ6 UniRef100_Q7EY69 UniRef100_Q7EY69 UniRef100_B9G106 UniRef100_B9G106 UniRef100_B6T0T9 UniRef100_B6T0T9 UniRef100_A3BI27 UniRef100_A3BI27 UniRef100_Q3T0I4 UniRef100_Q3T0I4 UniRef100_UPI0000E812F6 UniRef100_UPI0000E812F6 UniRef100_UPI0000E469DB UniRef100_UPI0000E469DB UniRef100_B9EQ17 UniRef100_B9EQ17 UniRef100_A7EA74 UniRef100_A7EA74 UniRef100_C1N9U6 UniRef100_C1N9U6 UniRef100_C1MP43 UniRef100_C1MP43 UniRef100_C1EBZ3 UniRef100_C1EBZ3 UniRef100_A4S2I2 UniRef100_A4S2I2 UniRef100_A4S0A2 UniRef100_A4S0A2 UniRef100_A9V7R3 UniRef100_A9V7R3 UniRef100_A4I464 UniRef100_A4I464