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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
virus China/Mar2007 RepID=A8W7G1_9VIRU
Length = 723
Score = 291 bits (746), Expect = 1e-77
Identities = 138/157 (87%), Positives = 145/157 (92%)
Frame = +1
Query: 7 KTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLT 186
K++LTD + YI +AN FFNDYPTLLFTRNHISKR G LKVRPVYAVDDIFIIIELMLT
Sbjct: 285 KSDLTDEQINLYISKANQFFNDYPTLLFTRNHISKRSGTLKVRPVYAVDDIFIIIELMLT 344
Query: 187 FPLTIQARKPSCCIMYGLETIRSSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYT 366
FPLTIQARKPSCCIMYGLETIR SN YI+++AR YSTFFSLDWSSYDQRLPRVITDIYYT
Sbjct: 345 FPLTIQARKPSCCIMYGLETIRGSNHYIDRLARPYSTFFSLDWSSYDQRLPRVITDIYYT 404
Query: 367 DFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNL 477
DFLRSLIVINHGYQPTYEYPTYPDLDEHKLY RMDNL
Sbjct: 405 DFLRSLIVINHGYQPTYEYPTYPDLDEHKLYSRMDNL 441
[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
partitivirus 1-W8 RepID=Q50LH7_9VIRU
Length = 709
Score = 208 bits (530), Expect = 1e-52
Identities = 98/143 (68%), Positives = 115/143 (80%), Gaps = 4/143 (2%)
Frame = +1
Query: 61 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKP----SCCI 228
F + T+LFTRNHIS RDG LK RPVYAVDD FI+ ELM++FPL + AR P CI
Sbjct: 288 FMQKHVTMLFTRNHISDRDGFLKQRPVYAVDDFFILCELMISFPLHVMARYPINGIKSCI 347
Query: 229 MYGLETIRSSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQ 408
MY ETIR SNRY++ IARD+ +FF++DWSS+DQR+PRVITDI++TDFLR LIVINHGYQ
Sbjct: 348 MYSFETIRGSNRYLDSIARDFISFFTIDWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQ 407
Query: 409 PTYEYPTYPDLDEHKLYHRMDNL 477
PTYEYP YPDL EH LY RM+NL
Sbjct: 408 PTYEYPAYPDLSEHDLYKRMNNL 430
[3][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
RepID=Q5GHF1_9VIRU
Length = 706
Score = 201 bits (512), Expect = 2e-50
Identities = 91/140 (65%), Positives = 114/140 (81%)
Frame = +1
Query: 58 SFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYG 237
SF PT+LFTRNHIS RDG LK RPVYA+DD+FI +E M+TFPL + ARK CCIMYG
Sbjct: 286 SFILKRPTMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESMITFPLHVMARKIECCIMYG 345
Query: 238 LETIRSSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 417
ETIR SNR I++IA + +FF++DWS +DQRLPRVITDI+++DFL +IVI+HGYQPTY
Sbjct: 346 YETIRGSNRQIDKIASSFRSFFTIDWSGFDQRLPRVITDIFWSDFLERMIVISHGYQPTY 405
Query: 418 EYPTYPDLDEHKLYHRMDNL 477
+YP+YPDL K++ RMDN+
Sbjct: 406 DYPSYPDLTPDKMFQRMDNI 425
[4][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-1 RepID=Q6BE43_9VIRU
Length = 706
Score = 201 bits (510), Expect = 3e-50
Identities = 93/152 (61%), Positives = 112/152 (73%)
Frame = +1
Query: 22 DSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTI 201
D D FF PT+LFTRNHIS RDG LK RPVYAVDD+F+I+E+MLTFPL +
Sbjct: 275 DFDSSSIFSRMRFFFLTRPTMLFTRNHISDRDGNLKQRPVYAVDDLFLILEVMLTFPLLV 334
Query: 202 QARKPSCCIMYGLETIRSSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRS 381
AR P CCIMYGLETIR SN +I+ A+ + ++F++DWS YDQRLPR ITD+YYTDFL S
Sbjct: 335 MARLPECCIMYGLETIRGSNHWIDSTAKRFRSYFTIDWSQYDQRLPRCITDLYYTDFLES 394
Query: 382 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNL 477
LI+IN GYQPT +Y YPDL ++ RM NL
Sbjct: 395 LIIINFGYQPTADYADYPDLTPDMMFTRMTNL 426
[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=D0EIN9_9VIRU
Length = 502
Score = 197 bits (500), Expect = 4e-49
Identities = 88/144 (61%), Positives = 113/144 (78%)
Frame = +1
Query: 46 DEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCC 225
D SF P +LFTRNHIS RDG LK RPVYA+DD+FI +E +TFPL + ARK CC
Sbjct: 282 DALRSFILKRPVMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESKITFPLHVMARKIECC 341
Query: 226 IMYGLETIRSSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGY 405
IMYG ETIR SNR I+++A +Y ++F++DWS +DQRLPRVITDI++TDFL +IVI+HGY
Sbjct: 342 IMYGYETIRGSNRQIDKLASNYKSYFTIDWSGFDQRLPRVITDIFWTDFLERMIVISHGY 401
Query: 406 QPTYEYPTYPDLDEHKLYHRMDNL 477
QPT++YP+YPDL K++ RM N+
Sbjct: 402 QPTFDYPSYPDLTPDKMFQRMSNI 425
[6][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
RepID=Q9YX75_9VIRU
Length = 673
Score = 192 bits (489), Expect = 7e-48
Identities = 86/139 (61%), Positives = 110/139 (79%)
Frame = +1
Query: 61 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 240
FF PT+LFTRNHIS RDG LK RPVYAVDD+F+ IE MLTFP + ARKP CCIMYGL
Sbjct: 284 FFLQRPTMLFTRNHISDRDGILKQRPVYAVDDLFLTIESMLTFPAHVIARKPECCIMYGL 343
Query: 241 ETIRSSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 420
ETIR SN+ +++IA DY +FF++DWS +DQRLP VI +++T+++ L+V+NHGY PTYE
Sbjct: 344 ETIRGSNQILDKIASDYKSFFTIDWSGFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYE 403
Query: 421 YPTYPDLDEHKLYHRMDNL 477
YP+YPDL + + R+ NL
Sbjct: 404 YPSYPDLTTNDMVSRLTNL 422
[7][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
virus 717 RepID=Q9Q9X2_9VIRU
Length = 730
Score = 162 bits (410), Expect = 1e-38
Identities = 72/121 (59%), Positives = 94/121 (77%)
Frame = +1
Query: 61 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 240
F +PT++FTRNHISKRDG LKVRPVYAVD++F+ +E ML FP T+QARKP CCIMYGL
Sbjct: 315 FLKSFPTMMFTRNHISKRDGTLKVRPVYAVDELFLDLECMLAFPATVQARKPECCIMYGL 374
Query: 241 ETIRSSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 420
ETIR SN ++ +A+ + +F ++DWS YDQRLP I ++ +L SL++I+HGY PT E
Sbjct: 375 ETIRGSNIKLDSLAQGFISFATIDWSGYDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSE 434
Query: 421 Y 423
Y
Sbjct: 435 Y 435
[8][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=B2L075_9VIRU
Length = 185
Score = 156 bits (395), Expect = 6e-37
Identities = 67/108 (62%), Positives = 89/108 (82%)
Frame = +1
Query: 154 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRSSNRYIEQIARDYSTFFSLDWSSYDQR 333
D+FI +E M+TFPL + ARK CCIMYG ETIR SNR I+++A +Y +FF++DWS +DQR
Sbjct: 1 DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60
Query: 334 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNL 477
LPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+
Sbjct: 61 LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNI 108
[9][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
hypoxylon virus RepID=Q85055_AHV
Length = 665
Score = 113 bits (282), Expect = 8e-24
Identities = 57/121 (47%), Positives = 77/121 (63%)
Frame = +1
Query: 61 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 240
+F PT L R+HISKRD LKVRPVY I+I IE ML +PL QARK CCIMYGL
Sbjct: 249 WFKKVPTELLVRSHISKRDN-LKVRPVYNAPMIYIRIECMLFYPLLAQARKRDCCIMYGL 307
Query: 241 ETIRSSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 420
ETIR +E+I+ +++F +DWS +D P I++ ++ +L + I+I+HGY
Sbjct: 308 ETIRGGMNELERISNAFNSFLLIDWSRFDHLAPFTISNFFFKKWLPTKILIDHGYAQISN 367
Query: 421 Y 423
Y
Sbjct: 368 Y 368
[10][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6X9T6_9VIRU
Length = 663
Score = 106 bits (264), Expect = 9e-22
Identities = 54/121 (44%), Positives = 73/121 (60%)
Frame = +1
Query: 61 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 240
+F PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGL
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGL 311
Query: 241 ETIRSSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 420
ETIR IE +A +S F +DWS +DQ +P + D++Y D++ +LI+++ GY +
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHN 371
Query: 421 Y 423
Y
Sbjct: 372 Y 372
[11][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
1 RepID=Q5DM90_9VIRU
Length = 663
Score = 106 bits (264), Expect = 9e-22
Identities = 54/121 (44%), Positives = 73/121 (60%)
Frame = +1
Query: 61 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 240
+F PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGL
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGL 311
Query: 241 ETIRSSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 420
ETIR IE +A +S F +DWS +DQ +P + D++Y D++ +LI+++ GY +
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHN 371
Query: 421 Y 423
Y
Sbjct: 372 Y 372
[12][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6EM35_9VIRU
Length = 663
Score = 105 bits (261), Expect = 2e-21
Identities = 54/121 (44%), Positives = 72/121 (59%)
Frame = +1
Query: 61 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 240
+F PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYG
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGF 311
Query: 241 ETIRSSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 420
ETIR IE +A +S F +DWS +DQ +P + D++Y D++ +LI+I+ GY +
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHN 371
Query: 421 Y 423
Y
Sbjct: 372 Y 372
[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
annosum P-type partitivirus RepID=Q8QY51_9VIRU
Length = 734
Score = 85.1 bits (209), Expect = 2e-15
Identities = 43/116 (37%), Positives = 68/116 (58%)
Frame = +1
Query: 76 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRS 255
PT+++ R+ ISK LKVRPVY +F+++E MLT L Q RKP CI++ ETIR
Sbjct: 281 PTVMYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRG 339
Query: 256 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEY 423
+ +I+ +++ F D+S +DQ P I ++ F+ +I ++ GYQ + Y
Sbjct: 340 GMHELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIY 395
[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
Length = 576
Score = 71.6 bits (174), Expect = 3e-11
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Frame = +1
Query: 73 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLET 246
Y F R H+ + D P KVR V+ ++ ELM +PL + AR P +++G ET
Sbjct: 202 YWNTAFARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYET 261
Query: 247 IRSSNRYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT 414
+ + A D YST +LDWS +D+ + + +R + GY PT
Sbjct: 262 LTGGWSRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPT 321
Query: 415 YEYPTYPDLDEHKL 456
YP PD + +L
Sbjct: 322 ISYPNAPDTNPDRL 335
[15][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
virus RepID=C0STM0_9VIRU
Length = 580
Score = 55.8 bits (133), Expect = 1e-06
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Frame = +1
Query: 73 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETI 249
YP + T++ I P KVR ++ V + +++E M +PL R + +++G ET+
Sbjct: 199 YPINIHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETM 258
Query: 250 RSS----NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 414
N + + SLDWS +D R L VI D+Y ++S N+GY PT
Sbjct: 259 LGGWYKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPT 318
Query: 415 YEYP 426
+YP
Sbjct: 319 VDYP 322
[16][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=Q4KUU4_9VIRU
Length = 616
Score = 55.1 bits (131), Expect = 2e-06
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Frame = +1
Query: 10 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 183
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 184 TFPLTIQARKPSCCIMYGLETIRSSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 351
+ ++ S +++G ET + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 352 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 453
I YT ++S + GY PT+ P +P ++ K
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDK 360
[17][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
cryptic virus 1 RepID=D0EP81_9VIRU
Length = 559
Score = 55.1 bits (131), Expect = 2e-06
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 9/136 (6%)
Frame = +1
Query: 73 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 246
+P LL T+ I K+D P K+R ++ +II E ML + + PS +++G ET
Sbjct: 174 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 233
Query: 247 IRSSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 405
++ RD +F +LDWS +D+R ++ I YT R+ + + GY
Sbjct: 234 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 288
Query: 406 QPTYEYPTYPDLDEHK 453
PT+ PT+P D K
Sbjct: 289 VPTHSAPTHPQWDHTK 304
[18][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=B2M1T3_9VIRU
Length = 616
Score = 55.1 bits (131), Expect = 2e-06
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Frame = +1
Query: 10 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 183
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 184 TFPLTIQARKPSCCIMYGLETIRSSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 351
+ ++ S +++G ET + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 352 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 453
I YT ++S + GY PT+ P +P ++ K
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDK 360
[19][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
RepID=B2CGP3_9VIRU
Length = 616
Score = 55.1 bits (131), Expect = 2e-06
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 9/136 (6%)
Frame = +1
Query: 73 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 246
+P LL T+ I K+D P K+R ++ +II E ML + + PS +++G ET
Sbjct: 230 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 289
Query: 247 IRSSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 405
++ RD +F +LDWS +D+R ++ I YT R+ + + GY
Sbjct: 290 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 344
Query: 406 QPTYEYPTYPDLDEHK 453
PT+ PT+P D K
Sbjct: 345 VPTHSAPTHPQWDHTK 360
[20][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R744_9VIRU
Length = 616
Score = 55.1 bits (131), Expect = 2e-06
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Frame = +1
Query: 10 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 183
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 184 TFPLTIQARKPSCCIMYGLETIRSSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 351
+ ++ S +++G ET + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 352 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 453
I YT ++S + GY PT+ P +P ++ K
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDK 360
[21][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R742_9VIRU
Length = 616
Score = 55.1 bits (131), Expect = 2e-06
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Frame = +1
Query: 10 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 183
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 184 TFPLTIQARKPSCCIMYGLETIRSSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 351
+ ++ S +++G ET + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 352 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 453
I YT ++S + GY PT+ P +P ++ K
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDK 360
[22][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R739_9VIRU
Length = 616
Score = 55.1 bits (131), Expect = 2e-06
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Frame = +1
Query: 10 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 183
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 184 TFPLTIQARKPSCCIMYGLETIRSSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 351
+ ++ S +++G ET + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 352 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 453
I YT ++S + GY PT+ P +P ++ K
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDK 360
[23][TOP]
>UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus
partitivirus RepID=A2VA07_9VIRU
Length = 132
Score = 53.9 bits (128), Expect = 5e-06
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Frame = +1
Query: 79 TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETI 249
T L +R+H+ + D P K+R V+ V + +++E M + + + +++G ETI
Sbjct: 8 TYLHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETI 67
Query: 250 RSS-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 414
R + I Q+ ++ S+ S DWS +D + L VI D++ D +S N GY+P+
Sbjct: 68 RGGWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123