BB937502 ( RCC10612 )

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[1][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6T7E3_SOYBN
          Length = 291

 Score =  208 bits (530), Expect = 2e-52
 Identities = 110/141 (78%), Positives = 122/141 (86%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           +VRAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK  E +  LP   E
Sbjct: 139 VVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVEQLPV--E 196

Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
           EDEI ++PQ  +EEE I+EVVRTKYFDMPPLTV EAI+QLE VDHDFY FRNEETGEINI
Sbjct: 197 EDEI-LSPQ--EEEESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINI 253

Query: 64  VYKRKEGGYGLIIPKGNGEVD 2
           VYKRKEGGYGLI+PKG+GE +
Sbjct: 254 VYKRKEGGYGLIVPKGDGEAE 274

[2][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI0001984F94
          Length = 298

 Score =  200 bits (509), Expect = 5e-50
 Identities = 101/141 (71%), Positives = 118/141 (83%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           +VRAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG NRLK  +   PL     
Sbjct: 146 VVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPLV---- 201

Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
           E+E ++ PQK+D + LI E+VRTKYFDMPPLTV EA++QLE VDHDF+ FRNEETGEINI
Sbjct: 202 EEEADVVPQKEDGD-LINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINI 260

Query: 64  VYKRKEGGYGLIIPKGNGEVD 2
           +YKRK GGYGLIIPK NG+ +
Sbjct: 261 LYKRKAGGYGLIIPKENGKTE 281

[3][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7QEV5_VITVI
          Length = 230

 Score =  200 bits (509), Expect = 5e-50
 Identities = 101/141 (71%), Positives = 118/141 (83%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           +VRAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG NRLK  +   PL     
Sbjct: 78  VVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPLV---- 133

Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
           E+E ++ PQK+D + LI E+VRTKYFDMPPLTV EA++QLE VDHDF+ FRNEETGEINI
Sbjct: 134 EEEADVVPQKEDGD-LINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINI 192

Query: 64  VYKRKEGGYGLIIPKGNGEVD 2
           +YKRK GGYGLIIPK NG+ +
Sbjct: 193 LYKRKAGGYGLIIPKENGKTE 213

[4][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
          Length = 306

 Score =  198 bits (503), Expect = 2e-49
 Identities = 105/141 (74%), Positives = 115/141 (81%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           +VRAEE AET Y SIDLVSSIIQRKLRKIKEKE+DHGRHMKG NRLK  E   P+P   E
Sbjct: 154 VVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVRE---PVPQVVE 210

Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
            D  E++ Q  + E+ IEEVVRTK+FDMPPLTV EAI+QLE VDHDFY FRNEETGEINI
Sbjct: 211 GDADEVSQQ--EVEDSIEEVVRTKFFDMPPLTVSEAIEQLENVDHDFYGFRNEETGEINI 268

Query: 64  VYKRKEGGYGLIIPKGNGEVD 2
           VYKRK GGYGLIIPKGN E +
Sbjct: 269 VYKRKAGGYGLIIPKGNDEAE 289

[5][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
          Length = 231

 Score =  195 bits (495), Expect = 2e-48
 Identities = 99/141 (70%), Positives = 115/141 (81%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           +VRAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG NRLK  E +  +   D+
Sbjct: 78  VVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQVVVEDD 137

Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
            DE+     + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE V HDFY FR+EETGEINI
Sbjct: 138 ADEVS----QQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINI 193

Query: 64  VYKRKEGGYGLIIPKGNGEVD 2
           +YKRK GGYGLIIPKGNGE +
Sbjct: 194 IYKRKAGGYGLIIPKGNGEAE 214

[6][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PHY3_POPTR
          Length = 306

 Score =  195 bits (495), Expect = 2e-48
 Identities = 99/141 (70%), Positives = 115/141 (81%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           +VRAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG NRLK  E +  +   D+
Sbjct: 153 VVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQVVVEDD 212

Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
            DE+     + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE V HDFY FR+EETGEINI
Sbjct: 213 ADEVS----QQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINI 268

Query: 64  VYKRKEGGYGLIIPKGNGEVD 2
           +YKRK GGYGLIIPKGNGE +
Sbjct: 269 IYKRKAGGYGLIIPKGNGEAE 289

[7][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
           Tax=Ricinus communis RepID=B9SEK8_RICCO
          Length = 311

 Score =  192 bits (488), Expect = 1e-47
 Identities = 98/141 (69%), Positives = 115/141 (81%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           ++RAEE AET Y SIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK  E +   P  D+
Sbjct: 156 VIRAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVAE-PVKDD 214

Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
            DE++     D++E+ I+EVVRTKYFDMPPLTV EAI+QL+ VDHDFY FRNEETGEINI
Sbjct: 215 TDEVDGV-LGDEDEDYIDEVVRTKYFDMPPLTVSEAIEQLKNVDHDFYGFRNEETGEINI 273

Query: 64  VYKRKEGGYGLIIPKGNGEVD 2
           +YKRK GGYG+IIPK NG+ +
Sbjct: 274 IYKRKAGGYGIIIPKENGKAE 294

[8][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
           thaliana RepID=Q9FLV3_ARATH
          Length = 365

 Score =  188 bits (477), Expect = 2e-46
 Identities = 93/142 (65%), Positives = 117/142 (82%), Gaps = 1/142 (0%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           +VRAEE AET Y  IDLVS+IIQRKLRKIKEK++DHGRHMKG NRLK  E ++     D 
Sbjct: 207 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 266

Query: 244 EDEIEITP-QKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 68
           ED  + +  ++++E++LI+E+VRTK F+MPPLTV EA++QLE+V HDFY F+NEETGEIN
Sbjct: 267 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 326

Query: 67  IVYKRKEGGYGLIIPKGNGEVD 2
           IVYKRKEGGYGLIIPK +G+ +
Sbjct: 327 IVYKRKEGGYGLIIPKKDGKAE 348

[9][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
           RepID=RR30_SPIOL
          Length = 302

 Score =  180 bits (456), Expect = 7e-44
 Identities = 93/138 (67%), Positives = 109/138 (78%), Gaps = 3/138 (2%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE---VILPLPS 254
           ++RAEE AE+ Y SIDLVSSIIQRKLRKIK+K +DHGRHMKG NR K  +   V +    
Sbjct: 143 VIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHMKGFNRSKVRDPEPVRITREE 202

Query: 253 GDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 74
             EE E    P   ++++ IEEVVRTKYFDMPPLT+ EA++QLE VDHDFYAFRNEETG+
Sbjct: 203 VLEEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGD 262

Query: 73  INIVYKRKEGGYGLIIPK 20
           INI+YKRKEGGYGLIIPK
Sbjct: 263 INILYKRKEGGYGLIIPK 280

[10][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
           RepID=C9EFD1_SOLTU
          Length = 280

 Score =  179 bits (453), Expect = 2e-43
 Identities = 94/149 (63%), Positives = 117/149 (78%), Gaps = 8/149 (5%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS--EVILPLPSG 251
           ++RAEE AE+ YGSID+VSSIIQRKLRKIKEK++DHGRHMKG +RLK    EV+L     
Sbjct: 125 VIRAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEVLLV---- 180

Query: 250 DEEDEIEITPQKDDEEE------LIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
             ++++E  PQ+++ E+       + EVVR K FDMPPL+V EAI+QLE VDHDFY FRN
Sbjct: 181 --QEDLETLPQEEEVEDDDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRN 238

Query: 88  EETGEINIVYKRKEGGYGLIIPKGNGEVD 2
           EETGEINIVY+RKEGGYGLIIPK +G+ +
Sbjct: 239 EETGEINIVYRRKEGGYGLIIPKEDGKTE 267

[11][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
           RepID=Q672Q2_SOLLC
          Length = 311

 Score =  172 bits (436), Expect = 1e-41
 Identities = 90/142 (63%), Positives = 109/142 (76%), Gaps = 1/142 (0%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           ++RAEE  E+ YGSID+VSSIIQRKLRKIKEK++D GRHMKG +RLK  +    L   D 
Sbjct: 153 VIRAEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVRDPEALLVQEDL 212

Query: 244 EDEIEITPQKDDEEE-LIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 68
           E   +    +DD+ +  + EVVR K FDMPPL+V EAI+QLE VDHDFY FRNEETGEIN
Sbjct: 213 ETLSQEEEVEDDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRNEETGEIN 272

Query: 67  IVYKRKEGGYGLIIPKGNGEVD 2
           IVY+RKEGGYGLIIPK +G+ +
Sbjct: 273 IVYRRKEGGYGLIIPKEDGKTE 294

[12][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
           RepID=B6TYP8_MAIZE
          Length = 309

 Score =  152 bits (385), Expect = 1e-35
 Identities = 82/144 (56%), Positives = 108/144 (75%), Gaps = 3/144 (2%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP---LPS 254
           ++RAEE AE+TY SIDL ++I++RKLRKIKEKET+  R   G +     + I P   LP 
Sbjct: 140 VLRAEEDAESTYASIDLAAAIVKRKLRKIKEKETEVRR---GGDADGVWDEIPPADLLPP 196

Query: 253 GDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 74
             E D++E     +DEE ++ +VVRTK F+MPPLTV EA++QLE VDHDFY FR+E TG+
Sbjct: 197 A-EADDLEAAVGAEDEETVLAKVVRTKVFEMPPLTVEEALEQLENVDHDFYCFRDEATGQ 255

Query: 73  INIVYKRKEGGYGLIIPKGNGEVD 2
           +NI+Y+RKEGGYGLIIPK +G+VD
Sbjct: 256 VNILYRRKEGGYGLIIPKNDGKVD 279

[13][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
          Length = 309

 Score =  151 bits (381), Expect = 3e-35
 Identities = 80/146 (54%), Positives = 111/146 (76%), Gaps = 6/146 (4%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           ++RAEE AE+TY SIDL SSII+RKLRKIKEKETD  RH+KG  +   S+    L   ++
Sbjct: 149 VIRAEEDAESTYASIDLASSIIKRKLRKIKEKETDV-RHLKG-TKPPVSDWPPSLLDNND 206

Query: 244 ED------EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 83
           +D      ++E     +DE+ ++ +VVRTK F+MPPL+V EA++QL  VDH+FYAFR+E+
Sbjct: 207 DDAQAQLKDLEEAVGAEDEDTVLTKVVRTKVFEMPPLSVEEAMEQLVNVDHNFYAFRDEK 266

Query: 82  TGEINIVYKRKEGGYGLIIPKGNGEV 5
           TGE+N++YKRKEGG+GLI+PKG+G +
Sbjct: 267 TGEMNVLYKRKEGGFGLIVPKGDGHL 292

[14][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
           bicolor RepID=C5WRX8_SORBI
          Length = 310

 Score =  147 bits (372), Expect = 4e-34
 Identities = 79/143 (55%), Positives = 104/143 (72%), Gaps = 2/143 (1%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGD- 248
           ++RAEE AE+TY SIDL ++II+RKLRKIKEKET+  R   G     + E  LPL   D 
Sbjct: 140 VLRAEEDAESTYASIDLAAAIIKRKLRKIKEKETEVRRDGDGGAGGAWEEE-LPLLDDDL 198

Query: 247 -EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 71
            E DE+      +DE+ ++ +VVRTK F+MPPLTV EA++QL+ V H+FY FR+E TG++
Sbjct: 199 VEADELAAAVGAEDEQTVVAKVVRTKVFEMPPLTVEEALEQLDNVGHNFYCFRDEATGQV 258

Query: 70  NIVYKRKEGGYGLIIPKGNGEVD 2
           NI+Y+RKEGGYGLIIPK +G  D
Sbjct: 259 NILYRRKEGGYGLIIPKEDGNFD 281

[15][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=B8LMC5_PICSI
          Length = 321

 Score =  147 bits (372), Expect = 4e-34
 Identities = 79/145 (54%), Positives = 102/145 (70%), Gaps = 8/145 (5%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           +VRAEE AET Y SID+VS II+RKLRKIKEK+  HGR  K   + K  E++  +    +
Sbjct: 156 VVRAEEEAETIYASIDIVSDIIRRKLRKIKEKDGGHGRPSKMRKQPKLGELLSTVVMDVK 215

Query: 244 ED-EIEITPQKDDEE-------ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
           E  + E+    D EE       +L +EVVRTKYF+MPP++  EA++QL  VDHDFYAFRN
Sbjct: 216 ETRDKELDDLADVEEMRYEKIDDLSDEVVRTKYFEMPPMSPEEALEQLMNVDHDFYAFRN 275

Query: 88  EETGEINIVYKRKEGGYGLIIPKGN 14
            E+GE+N++YKRK GGYGLI+PK N
Sbjct: 276 MESGEVNVLYKRKHGGYGLIVPKNN 300

[16][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RWK9_PHYPA
          Length = 221

 Score =  134 bits (336), Expect = 6e-30
 Identities = 72/135 (53%), Positives = 93/135 (68%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           +VRAEE AE+ Y SID VS +I RKLRKIKEK+  HGR  K  +  +  EV+    S + 
Sbjct: 78  VVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPTKSRHSPRIGEVL----SDEV 133

Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
            D   I  +K D+  L +E+VRTKYF+M P+   EA++QL  V HDFYAFRN E+GEINI
Sbjct: 134 VDLDPILGRKPDD--LPDEIVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINI 191

Query: 64  VYKRKEGGYGLIIPK 20
           +YKR  GGYG+I+P+
Sbjct: 192 LYKRTHGGYGIIVPR 206

[17][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TA00_PHYPA
          Length = 297

 Score =  132 bits (331), Expect = 2e-29
 Identities = 74/137 (54%), Positives = 94/137 (68%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           +VRAEE AE+ Y SID VS +I RKLRKIKEK+  HGR  K   R+   EV+    S + 
Sbjct: 156 VVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPAKYSPRI--GEVL----SNEV 209

Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
            D   I  +K D+  L +EVVRTKYF+M P+   EA++QL  V HDFYAFRN E+GEINI
Sbjct: 210 VDLDPILERKPDD--LPDEVVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINI 267

Query: 64  VYKRKEGGYGLIIPKGN 14
           +YKR  GGYG+I+P+ +
Sbjct: 268 LYKRTHGGYGIIVPRND 284

[18][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
           RepID=Q8DKM6_THEEB
          Length = 209

 Score =  129 bits (324), Expect = 1e-28
 Identities = 75/143 (52%), Positives = 92/143 (64%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V V   ++RAEE +E  Y SIDLV+  I RKLRK+KEK  D  R  K  N +   EV+
Sbjct: 58  VTVFVNGSVIRAEESSENLYASIDLVADKIARKLRKLKEKRQDKSR-AKDTNSVVEPEVV 116

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
             L  GD       TPQ      L E+VVR KYF MPP+T+ EA++ LEMVDHDFY FRN
Sbjct: 117 TDLV-GDR------TPQ------LPEQVVRMKYFAMPPMTIQEALEHLEMVDHDFYVFRN 163

Query: 88  EETGEINIVYKRKEGGYGLIIPK 20
            +TGEIN+VY+R  GGYG+I P+
Sbjct: 164 RDTGEINVVYERNHGGYGVIQPR 186

[19][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
           punctiforme PCC 73102 RepID=B2IVM1_NOSP7
          Length = 214

 Score =  127 bits (318), Expect = 7e-28
 Identities = 70/150 (46%), Positives = 94/150 (62%), Gaps = 1/150 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +     ++RAEE +E  Y SIDLV+  I R+LRK KE+  D  +    P  +  +E +
Sbjct: 58  VTIYANGSVIRAEESSENLYASIDLVADKIARQLRKYKERRQDQ-KTQSQPTEVVVAESV 116

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
           +P   GD       TP      EL  EVVRTKYF MPP+T+ EA++QL++V HDFY FRN
Sbjct: 117 VPDLIGDR------TP------ELPNEVVRTKYFSMPPMTLAEALEQLQLVGHDFYMFRN 164

Query: 88  EETGEINIVYKRKEGGYGLIIPK-GNGEVD 2
            ETGEIN++Y+R  GGYG+I P+ GNG  +
Sbjct: 165 SETGEINVIYERNHGGYGVIHPRNGNGHTN 194

[20][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
          Length = 209

 Score =  126 bits (317), Expect = 9e-28
 Identities = 73/144 (50%), Positives = 92/144 (63%), Gaps = 1/144 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD-HGRHMKGPNRLKFSEV 272
           V +     ++RAEE +E  Y SIDLVS  I R+LRK KE+  D H R  + P       V
Sbjct: 58  VTIYTNGSVIRAEESSENLYASIDLVSDKIARQLRKFKERRQDKHSRSKEEP------VV 111

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
            +PL +    D    TP      EL EEVVRTKYF MPP+T+ EA++QLE+VDHDFY FR
Sbjct: 112 SVPLVTDLTGDR---TP------ELPEEVVRTKYFAMPPMTLREALEQLELVDHDFYMFR 162

Query: 91  NEETGEINIVYKRKEGGYGLIIPK 20
           N ETGEIN++Y+R  GGYG+I P+
Sbjct: 163 NAETGEINVIYERNHGGYGVIQPR 186

[21][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
           RepID=Q8YSA5_ANASP
          Length = 213

 Score =  124 bits (311), Expect = 4e-27
 Identities = 67/145 (46%), Positives = 88/145 (60%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +     ++RAEE +E  Y SIDLV+  I R+LRK KE++ D     +        E +
Sbjct: 58  VTIYANGSVIRAEESSENLYASIDLVADKISRQLRKYKERKQDQKTQAQPTTETIVPETV 117

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
           +    GD       TP      EL EEVVRTKYF MPP+TV EA++QL++V HDFY F N
Sbjct: 118 VADLIGDR------TP------ELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHN 165

Query: 88  EETGEINIVYKRKEGGYGLIIPKGN 14
            ETGEIN++Y+R  GGYG+I P+ N
Sbjct: 166 AETGEINVIYERNHGGYGVIQPRNN 190

[22][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
           Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
          Length = 213

 Score =  124 bits (310), Expect = 6e-27
 Identities = 67/145 (46%), Positives = 90/145 (62%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +     ++RAEE +E  Y SIDLV+  I R+LRK KE++ D     +    L  +E I
Sbjct: 58  VTIYANGSVIRAEESSENLYASIDLVADKISRQLRKYKERKQD-----QKTQALPTTETI 112

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
           +P       + +      D   EL EEVVRTKYF MPP+TV EA++QL++V HDFY F N
Sbjct: 113 VP-------ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHN 165

Query: 88  EETGEINIVYKRKEGGYGLIIPKGN 14
            ETGEIN++Y+R  GGYG+I P+ N
Sbjct: 166 AETGEINVIYERNHGGYGVIQPRNN 190

[23][TOP]
>UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2
           Tax=Cyanothece RepID=C7QW97_CYAP0
          Length = 205

 Score =  122 bits (306), Expect = 2e-26
 Identities = 75/164 (45%), Positives = 97/164 (59%)
 Frame = -1

Query: 505 AAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 326
           A + NK  AE         V V     ++RA+E +E+ Y SIDLVS  I R+LRK KEK 
Sbjct: 55  ARITNKHKAE---------VTVYANGTVIRAQEGSESLYASIDLVSDKIARQLRKYKEKL 105

Query: 325 TDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTV 146
            +     K PN +K  EV     +  E D I      D   EL  EV+R KYF MPP+T+
Sbjct: 106 NNK----KAPNPVKVGEVTTA--TAIEGDLIG-----DRTPELPAEVIRMKYFAMPPMTI 154

Query: 145 FEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGN 14
            EA+ QLE+VDHDFY FRN++T EIN++Y+R  GGYG+I P G+
Sbjct: 155 DEALHQLELVDHDFYMFRNKDTDEINVIYQRNHGGYGVIQPHGS 198

[24][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
           azollae' 0708 RepID=B9YPU1_ANAAZ
          Length = 214

 Score =  120 bits (302), Expect = 5e-26
 Identities = 67/143 (46%), Positives = 86/143 (60%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +     ++RAEE +E  Y SIDLV+  I R+LRK KE+  DH       N    +E +
Sbjct: 58  VTIYANGSVIRAEESSENLYASIDLVADKIARQLRKYKERRQDHKTQPIPTNEAVVAEPV 117

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
                GD       TP      EL  EVVRTKYF MPP+T+ EA +QL++V HDFY FRN
Sbjct: 118 ADSLIGDR------TP------ELPGEVVRTKYFPMPPMTLAEAQEQLQLVGHDFYMFRN 165

Query: 88  EETGEINIVYKRKEGGYGLIIPK 20
            ETGEIN++Y+R  GGYG+I P+
Sbjct: 166 AETGEINVIYERNHGGYGVIQPR 188

[25][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
           RepID=B0CDL4_ACAM1
          Length = 212

 Score =  120 bits (301), Expect = 6e-26
 Identities = 65/144 (45%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V + V   ++RAEE +E  Y SIDLV+  I R+LRK KEK     R  KGPN+       
Sbjct: 58  VTLFVNGSVIRAEESSENLYASIDLVADKIARQLRKYKEK-----RQTKGPNKGSNRSKA 112

Query: 268 LPLPSGDEEDEI-EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
           + L + +E+  I ++T  +D   EL EEVVR KYF + P++V +A++QL++VDHDFY F 
Sbjct: 113 VALQTPEEQPLIGDLT--RDRAPELPEEVVRCKYFAISPMSVHDALEQLDLVDHDFYVFE 170

Query: 91  NEETGEINIVYKRKEGGYGLIIPK 20
           N +TG++N++Y+R  GGYG+I P+
Sbjct: 171 NADTGQLNVIYERNHGGYGVIQPR 194

[26][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
          Length = 213

 Score =  120 bits (300), Expect = 8e-26
 Identities = 66/137 (48%), Positives = 85/137 (62%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           ++RAEE +E  Y SIDLV+  I R+LRK KE+  D   +    N++   E +     GD 
Sbjct: 66  VIRAEESSENLYASIDLVADKIARQLRKYKERLQDQKTNAPPTNQVLVPEPVAADLIGDR 125

Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
                 TP      EL  EVVRTKYF MPP+TV EA +QL++V HDFY F N ETGEIN+
Sbjct: 126 ------TP------ELPNEVVRTKYFSMPPMTVAEATEQLQLVGHDFYMFHNAETGEINV 173

Query: 64  VYKRKEGGYGLIIPKGN 14
           +Y+R  GGYG+I P+ N
Sbjct: 174 IYERNHGGYGVIQPRHN 190

[27][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Microcoleus chthonoplastes PCC 7420
           RepID=B4VJW0_9CYAN
          Length = 215

 Score =  119 bits (299), Expect = 1e-25
 Identities = 71/150 (47%), Positives = 92/150 (61%), Gaps = 1/150 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +   K ++RA+E +E  Y SIDLV+  IQR+LRK KEK+       K   + K   VI
Sbjct: 58  VTIYANKTVIRAQESSEDLYASIDLVADKIQRQLRKYKEKQ-----QKKTQTQPKTGAVI 112

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
              P    ED I      D   EL  EVVR KYF MPP+T+ EA +QL++VDHDFY FRN
Sbjct: 113 HEAPV--VEDLIG-----DRTPELPTEVVRMKYFAMPPMTIEEATEQLQLVDHDFYMFRN 165

Query: 88  EETGEINIVYKRKEGGYGLIIPK-GNGEVD 2
            +T EIN++Y+R  GGYG+I P+ GNG  +
Sbjct: 166 AKTDEINVIYERNHGGYGVIQPRNGNGHTN 195

[28][TOP]
>UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142
           RepID=B1WZE1_CYAA5
          Length = 201

 Score =  119 bits (298), Expect = 1e-25
 Identities = 75/172 (43%), Positives = 98/172 (56%)
 Frame = -1

Query: 517 VKEVAAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKI 338
           V + A + NK  AE         V V     ++RA+E +E  Y SIDLVS  I R+LRK 
Sbjct: 46  VAKNARITNKHKAE---------VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKY 96

Query: 337 KEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMP 158
           KEK  +H    K  + +K  EV+        E EIE     D E  L  EV+R KYF MP
Sbjct: 97  KEKINNH----KPQSSVKNPEVL-------PEREIEKDLIGDREAALPPEVIRMKYFAMP 145

Query: 157 PLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGNGEVD 2
           P+++ EA  QLE+VDHDFY FRN++T EIN++Y R  GG+G+I P+   E D
Sbjct: 146 PMSIEEAKHQLELVDHDFYMFRNQDTDEINVIYMRNHGGFGVIQPREPNEND 197

[29][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
           JA-3-3Ab RepID=Q2JS19_SYNJA
          Length = 191

 Score =  119 bits (297), Expect = 2e-25
 Identities = 72/172 (41%), Positives = 93/172 (54%), Gaps = 7/172 (4%)
 Frame = -1

Query: 517 VKEVAAVVNKLVAEAAVESIPVV-------VVVEVEKILVRAEEHAETTYGSIDLVSSII 359
           VK  A + +++    +V   P +       V V     ++RAEE +E  Y SID V+  +
Sbjct: 29  VKHFAQITSEVDVNLSVARNPRISANQSAEVTVYANGTVIRAEESSENLYASIDRVADKL 88

Query: 358 QRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVR 179
            RKLRK KE+   H         +  ++  L  P   E            + EL  EVVR
Sbjct: 89  ARKLRKYKERNGVHRIRHSPKTSVAVAQQPLTDPLNTER-----------QAELPPEVVR 137

Query: 178 TKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23
           TKYF MPP+TV EA+ QLE+VDHDFY FRN E GEIN++Y RK GGYGLI P
Sbjct: 138 TKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEINVIYVRKHGGYGLIRP 189

[30][TOP]
>UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806
           RepID=A8YEZ8_MICAE
          Length = 199

 Score =  118 bits (296), Expect = 2e-25
 Identities = 71/173 (41%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
 Frame = -1

Query: 517 VKEVAAVVNKLVAEAAVES---IP----VVVVVEVEKILVRAEEHAETTYGSIDLVSSII 359
           VK    +  K+    +VE    IP      V V     ++RA+E +E  Y SIDLVS  I
Sbjct: 28  VKHFNGITTKVDVHLSVEKNARIPDRHKAEVTVYANGTVIRAQEGSENLYASIDLVSDKI 87

Query: 358 QRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVR 179
            R+LRK KE+  DH  H    + +K SEV+       +E  ++     D   EL  EVVR
Sbjct: 88  ARQLRKYKERLVDHRTH----STVKTSEVV-------QEKPLDDNLIGDRTPELPAEVVR 136

Query: 178 TKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
            KYF MPP+T+ EA+ QL++VDHDF+ F N++T EIN++Y+R  GG+G+I P+
Sbjct: 137 MKYFAMPPMTIEEALTQLQLVDHDFFMFCNKDTNEINVIYQRNHGGFGVIQPR 189

[31][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
           RepID=A0YIH4_9CYAN
          Length = 212

 Score =  118 bits (295), Expect = 3e-25
 Identities = 68/146 (46%), Positives = 93/146 (63%), Gaps = 1/146 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +     ++RA+E +E  Y SIDLV+  I R+LRK K+K    G+H+  P   K +EV+
Sbjct: 58  VTIYANGTVIRAQESSENLYASIDLVADKIARQLRKFKDKR--QGKHLHPP---KLAEVV 112

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
              P    ED I      D + EL  EVVRTKYF MPP+ + +A++QL++VDHDFY F N
Sbjct: 113 ENQPV--IEDLIG-----DRQPELPPEVVRTKYFAMPPMNLQDALEQLQLVDHDFYVFCN 165

Query: 88  EETGEINIVYKR-KEGGYGLIIPKGN 14
            +TGE+N++YKR   GGYGLI P+ N
Sbjct: 166 ADTGELNVIYKRVNHGGYGLIQPRNN 191

[32][TOP]
>UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7
          Length = 199

 Score =  117 bits (294), Expect = 4e-25
 Identities = 62/143 (43%), Positives = 91/143 (63%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V     ++RA+E +E  Y SIDLVS  I R+LRK KE++ +   H    + +K  EV+
Sbjct: 58  VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKERKLEQNAH----SPVKAGEVV 113

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
                  +++ IE     D + EL  EVVR KYF MPP+++ EA++QL++VDHDF+ FRN
Sbjct: 114 -------QQETIEENLIGDRQPELPPEVVRMKYFGMPPMSIDEALEQLQLVDHDFFMFRN 166

Query: 88  EETGEINIVYKRKEGGYGLIIPK 20
            +T EIN++Y R  GG+G+I P+
Sbjct: 167 RDTNEINVIYIRNHGGFGVIQPR 189

[33][TOP]
>UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT
          Length = 199

 Score =  117 bits (293), Expect = 5e-25
 Identities = 67/149 (44%), Positives = 89/149 (59%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V     ++RA+E +E  Y SIDLVS  I R+LRK KEK ++H    K  +  K  EV+
Sbjct: 58  VTVYANGTVIRAQEGSENLYASIDLVSDKISRQLRKYKEKVSNH----KPQSSAKLPEVL 113

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
                   E E+      D + EL  EV+R KYF MP +++ EA  QLE+VDHDFY FRN
Sbjct: 114 -------PEKEVSEDLIGDRQAELPPEVIRMKYFAMPSMSIEEAKHQLELVDHDFYMFRN 166

Query: 88  EETGEINIVYKRKEGGYGLIIPKGNGEVD 2
           +ET EIN++Y R  GG+G+I P+   E D
Sbjct: 167 QETEEINVIYMRNHGGFGIIQPREANEND 195

[34][TOP]
>UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI
          Length = 187

 Score =  117 bits (292), Expect = 7e-25
 Identities = 62/143 (43%), Positives = 87/143 (60%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V+    ++RAEE  E  Y SIDLV+  + R++RK KE+     +   G      ++  
Sbjct: 58  VTVQASGTIIRAEEETENLYASIDLVADKLHRQMRKYKERMQKKPKPKTG--LAVANQAP 115

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
           + LP+GDE+              L +EVVRTKYF MPP++  EA+D L +VDHDF+ FRN
Sbjct: 116 ISLPNGDEK-----------ATALPKEVVRTKYFAMPPMSPEEALDHLALVDHDFFVFRN 164

Query: 88  EETGEINIVYKRKEGGYGLIIPK 20
            E+GEIN++Y R  GGYGLI+P+
Sbjct: 165 AESGEINVLYARNHGGYGLIVPR 187

[35][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
           JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
          Length = 190

 Score =  117 bits (292), Expect = 7e-25
 Identities = 69/144 (47%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKFSEV 272
           V V     ++RAEE +E  Y SID V+  + RKLRK KE+   H  RH       K S  
Sbjct: 59  VTVYANGTVIRAEESSENLYASIDRVADKLARKLRKYKERNGIHRVRHTP-----KTSVA 113

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
           +   P  D  +        + + EL  EVVRTKYF MPP+TV EA+ QLE+VDHDFY FR
Sbjct: 114 VAQQPVTDPLNT-------ERQAELPAEVVRTKYFAMPPMTVQEALHQLELVDHDFYVFR 166

Query: 91  NEETGEINIVYKRKEGGYGLIIPK 20
           N E GEIN++Y R  GGYGLI P+
Sbjct: 167 NIENGEINVIYVRNHGGYGLIRPR 190

[36][TOP]
>UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110
           RepID=A3IRI7_9CHRO
          Length = 199

 Score =  117 bits (292), Expect = 7e-25
 Identities = 69/149 (46%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH--MKGPNRLKFSE 275
           V V     ++RA+E +E  Y SIDLVS  I R+LRK KEK  +H     +K P+ L  +E
Sbjct: 58  VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNHKPQSSVKSPDVLPETE 117

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           V        +ED I      D E EL  EV+R KYF MPP+++ EA  QLE+VDHDFY F
Sbjct: 118 V--------KEDLIG-----DREVELPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYMF 164

Query: 94  RNEETGEINIVYKRKEGGYGLIIPKGNGE 8
           RN++T EIN++Y R  GG+G+I P+   E
Sbjct: 165 RNQDTDEINVIYMRNHGGFGVIQPRETHE 193

[37][TOP]
>UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa
           NIES-843 RepID=B0JSS1_MICAN
          Length = 199

 Score =  116 bits (291), Expect = 9e-25
 Identities = 71/173 (41%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
 Frame = -1

Query: 517 VKEVAAVVNKLVAEAAVES---IP----VVVVVEVEKILVRAEEHAETTYGSIDLVSSII 359
           VK    +  K+    +VE    IP      V V     ++RA+E +E  Y SIDLVS  I
Sbjct: 28  VKHFNGITTKVDVHLSVEKNARIPDRHRAEVTVYANGTVIRAQEGSENLYASIDLVSDKI 87

Query: 358 QRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVR 179
            R+LRK KE+  DH  +      +K SEV+       +E  ++ +   D   EL  EVVR
Sbjct: 88  ARQLRKYKERLVDHRTNAP----VKTSEVV-------QEKPLDGSLIGDRTPELPAEVVR 136

Query: 178 TKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
            KYF MPP+T+ EA+ QL++VDHDFY F N++T EIN++Y+R  GG+G+I P+
Sbjct: 137 MKYFAMPPMTIEEALTQLQLVDHDFYMFCNKDTNEINVIYQRNHGGFGVIQPR 189

[38][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
          Length = 224

 Score =  115 bits (288), Expect = 2e-24
 Identities = 66/169 (39%), Positives = 101/169 (59%), Gaps = 7/169 (4%)
 Frame = -1

Query: 499 VVNKLVAEAAVESIPVV-------VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRK 341
           ++NK+    +V++ P +       V V +  ++VRAEE +E+ Y SID+V+  + R+LRK
Sbjct: 34  LINKVDVCLSVQNNPRIAPKQTAEVTVFLNNVVVRAEESSESLYASIDMVTDKLTRQLRK 93

Query: 340 IKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDM 161
            KEK  D       P  +  + +  P  +    D  E+    + + +L + VVR+KYF M
Sbjct: 94  YKEKRRDQDHATVRPTDVD-ATINAPDITSHNADISEVL---NHQPKLPDTVVRSKYFAM 149

Query: 160 PPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGN 14
           PP+TV  A++ LE+V HDFY FRN ETGEIN++Y+R   GYGL+ P+ N
Sbjct: 150 PPMTVQTALENLELVGHDFYMFRNVETGEINVIYERNHKGYGLLQPRQN 198

[39][TOP]
>UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002
           RepID=LRTA_SYNP2
          Length = 193

 Score =  114 bits (286), Expect = 4e-24
 Identities = 65/143 (45%), Positives = 86/143 (60%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V     ++RA+E +E  Y SIDLVS  I R+LRK KEK      H++     K SEV+
Sbjct: 58  VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQE----KTSEVL 113

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
                   ED +      D   EL  EVVR KYF MPP+T+ EA++QL++VDHDFY F N
Sbjct: 114 -------PEDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLN 166

Query: 88  EETGEINIVYKRKEGGYGLIIPK 20
           ++T  IN++Y R  GGYG+I P+
Sbjct: 167 KDTNAINVIYIRNHGGYGVIQPR 189

[40][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
          Length = 215

 Score =  114 bits (285), Expect = 5e-24
 Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 1/147 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +     ++RA+E +E  Y SIDLV+  I R+LRK KEK        K  + ++   V+
Sbjct: 58  VTIYANGTVIRAQESSENLYASIDLVADKIARQLRKYKEKRQSKVNKTKTVDLIESQPVV 117

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
             L               D + EL  EVVRTKYF MP +TV EA++QL+++DHDFY F N
Sbjct: 118 ENLIG-------------DRQAELPSEVVRTKYFPMPSMTVEEALEQLQLIDHDFYMFSN 164

Query: 88  EETGEINIVYKR-KEGGYGLIIPKGNG 11
             TGEIN++YKR   GGYGLI P+ NG
Sbjct: 165 GVTGEINVIYKRYHHGGYGLIQPRPNG 191

[41][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
           6803 RepID=LRTA_SYNY3
          Length = 191

 Score =  114 bits (284), Expect = 6e-24
 Identities = 67/161 (41%), Positives = 93/161 (57%)
 Frame = -1

Query: 505 AAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 326
           A + NK  AE         V V     ++RA+E +E  Y SIDLV+  I R+LRK KE+ 
Sbjct: 48  ARITNKHKAE---------VTVYANGTVIRAQEGSENLYASIDLVADKIARQLRKYKERI 98

Query: 325 TDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTV 146
            D     K    +K SE++       E+  +E     D   EL  EV+R KYF MPP+ +
Sbjct: 99  QD-----KQHGNVKTSEIV-------EDKPVEENLIGDRAPELPSEVLRMKYFAMPPMAI 146

Query: 145 FEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23
            +A++QL++VDHDFY FRN++T EIN++Y R  GGYG+I P
Sbjct: 147 EDALEQLQLVDHDFYMFRNKDTDEINVIYIRNHGGYGVIQP 187

[42][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
          Length = 212

 Score =  113 bits (283), Expect = 8e-24
 Identities = 68/149 (45%), Positives = 91/149 (61%), Gaps = 1/149 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +     ++RA+E +E  Y SIDLV+  I R+LRK KEK     R  K     K  EV+
Sbjct: 58  VTIYANGTVIRAQESSENLYASIDLVADKIARQLRKYKEK-----RMAKQYQLPKTGEVV 112

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
              P  D+          D   +L EEVVRTKYF MPP+++ EA++QL+++DHDFY FRN
Sbjct: 113 AQKPIVDDLIG-------DRTVKLPEEVVRTKYFAMPPMSIQEALEQLQLIDHDFYMFRN 165

Query: 88  EETGEINIVYKRK-EGGYGLIIPKGNGEV 5
            ET EIN++Y+R   GGYG+I P+ NG V
Sbjct: 166 AETDEINVIYQRSHHGGYGVIQPR-NGSV 193

[43][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
          Length = 207

 Score =  112 bits (279), Expect = 2e-23
 Identities = 65/146 (44%), Positives = 88/146 (60%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +     ++RAEE  E  Y SIDLVS  I R+L+K KEK  D     KG  +L  +E  
Sbjct: 58  VTIYANGTVIRAEECNENLYASIDLVSDKITRQLKKYKEKLRDR----KG--QLSTAETA 111

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
             L  G    ++        + EL +++VRTKYF MP +TV +A+ QL++VDHDFY FRN
Sbjct: 112 DQLSDGALVTDL----LNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRN 167

Query: 88  EETGEINIVYKRKEGGYGLIIPKGNG 11
             TGEIN++Y+R  GGYG+I P+  G
Sbjct: 168 AATGEINVIYERNHGGYGVIQPRPEG 193

[44][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
          Length = 199

 Score =  110 bits (276), Expect = 5e-23
 Identities = 61/145 (42%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V     ++RA+E +E  Y SIDLVS  I R+LRK KE+  +   +             
Sbjct: 58  VTVYANGAVIRAQEGSENLYASIDLVSDKIARQLRKYKERRLEQKAYS------------ 105

Query: 268 LPLPSGD--EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            P+ +GD  ++  +E     D + EL  EVVR KYF MP +++ EA++QL++VDHDFY F
Sbjct: 106 -PVKTGDVVQDQPVEGNLIGDRQPELPPEVVRMKYFAMPLMSIEEALEQLQLVDHDFYMF 164

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           RN  T EIN++Y R  GGYG+I P+
Sbjct: 165 RNRNTNEINVIYIRNHGGYGVIQPR 189

[45][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
           PCC 6301 RepID=Q5N179_SYNP6
          Length = 207

 Score =  110 bits (275), Expect = 7e-23
 Identities = 64/146 (43%), Positives = 88/146 (60%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +     ++RAEE  E  Y SIDLVS  I R+L+K KE+  D     KG  +L  +E  
Sbjct: 58  VTIYANGTVIRAEECNENLYASIDLVSDKITRQLKKYKEELRDR----KG--QLSTAETA 111

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
             L  G    ++        + EL +++VRTKYF MP +TV +A+ QL++VDHDFY FRN
Sbjct: 112 DQLSDGALVTDL----LNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRN 167

Query: 88  EETGEINIVYKRKEGGYGLIIPKGNG 11
             TGEIN++Y+R  GGYG+I P+  G
Sbjct: 168 AATGEINVIYERNHGGYGVIQPRPEG 193

[46][TOP]
>UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307
           RepID=A5GUZ2_SYNR3
          Length = 187

 Score =  106 bits (265), Expect = 1e-21
 Identities = 56/137 (40%), Positives = 80/137 (58%), Gaps = 5/137 (3%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           ++RA+E ++  Y SIDLV+  + R+L++ K++   HG H                   D 
Sbjct: 65  VIRAQERSQNLYASIDLVAGKLARQLQRHKDRRQGHGHH------------------SDL 106

Query: 244 EDEIEITPQKDD-----EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEET 80
           + E E+ P + D       EL   VVR KYF MPP++V EAI QLE++DHDFY FRN + 
Sbjct: 107 QAEPEVMPLQGDMLQGRHAELPAPVVRRKYFAMPPMSVEEAIHQLEVIDHDFYVFRNADN 166

Query: 79  GEINIVYKRKEGGYGLI 29
           GE+ +VY+R  GGYG+I
Sbjct: 167 GELQVVYQRNHGGYGVI 183

[47][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
           RepID=C6YXL0_ORYSJ
          Length = 321

 Score =  105 bits (263), Expect = 2e-21
 Identities = 63/144 (43%), Positives = 92/144 (63%), Gaps = 6/144 (4%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           ++RAEE AE+TY SIDL SSII+RKLRKIKEKETD  RH+KG  +   S+    L   ++
Sbjct: 149 VIRAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKG-TKPPVSDWPPSLLDNND 206

Query: 244 ED------EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 83
           +D      ++E     +DE+ ++  VVRTK F+MPPL+  EA++QL   DH F+A    +
Sbjct: 207 DDAQAQLKDLEEAVGAEDEDTVLTRVVRTKVFEMPPLSGEEAMEQLGNGDHTFHALPRRK 266

Query: 82  TGEINIVYKRKEGGYGLIIPKGNG 11
            G      +++ G +G I+P+G+G
Sbjct: 267 NGGDEPPVQKEGGRFGPIVPQGDG 290

[48][TOP]
>UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001
           RepID=B5IMZ9_9CHRO
          Length = 195

 Score =  105 bits (261), Expect = 3e-21
 Identities = 59/139 (42%), Positives = 81/139 (58%), Gaps = 4/139 (2%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE----VILPLP 257
           ++RA+EH++  Y SIDLV+S + R+L + KE+   H RH    +R    E      LP P
Sbjct: 65  VIRAQEHSDNLYASIDLVASKLTRQLNRYKERV--HERHQGPVHRSARDEEAGAASLPPP 122

Query: 256 SGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG 77
                D          E EL    VR KYF MPP+++ EA+ QLE++DHDFY FR  E+G
Sbjct: 123 GSSLTD--------GKEPELPSRGVRRKYFAMPPMSLDEALHQLELIDHDFYVFREAESG 174

Query: 76  EINIVYKRKEGGYGLIIPK 20
           +I +VY R  GG+G+I PK
Sbjct: 175 QIQVVYHRNHGGFGVIQPK 193

[49][TOP]
>UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
           RepID=A4CWK2_SYNPV
          Length = 195

 Score =  104 bits (260), Expect = 4e-21
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V     ++RA+E +E  Y SIDLV+S + R+LR+ K++ +DH  H  G    K SE  
Sbjct: 57  VTVFANGTVIRAQERSENLYASIDLVASKLARQLRRYKDRHSDH-HHSHGH---KASET- 111

Query: 268 LPLPSGDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
            P      ++E  +    D +E +L    VR KYF MPP+T+ +A  QL+++DHDFY FR
Sbjct: 112 -PTTEAVLDNEAVVESLLDGKEVQLPSPGVRRKYFAMPPMTLEQARQQLDLIDHDFYVFR 170

Query: 91  NEETGEINIVYKRKEGGYGLIIPKG 17
           + ++GE+ ++Y R  GGYG+I  +G
Sbjct: 171 DSDSGELQVIYHRNHGGYGVIEARG 195

[50][TOP]
>UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
           Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9
          Length = 195

 Score =  104 bits (259), Expect = 5e-21
 Identities = 55/140 (39%), Positives = 83/140 (59%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V     ++RA+E +E  Y SIDLV   + R+LRK KE+  DH  H  G +    + + 
Sbjct: 57  VTVFANGTVIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHGHS----ASLT 111

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
                  +E  +E +     E +L E  VR KYF MPP+T+ +A  QL+++DHDFY FR+
Sbjct: 112 PSTEEVSDESAVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFRD 171

Query: 88  EETGEINIVYKRKEGGYGLI 29
            +TG++ ++Y+R  GGYG+I
Sbjct: 172 SKTGDLQVIYRRNHGGYGVI 191

[51][TOP]
>UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9515 RepID=A2BV60_PROM5
          Length = 194

 Score =  104 bits (259), Expect = 5e-21
 Identities = 57/144 (39%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +     ++RAEE  E  Y SIDLVS+ + RKLRK KE+   +  +    N+  F+   
Sbjct: 57  VTIFASGTIIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHYKNLNYNLEKNKHSFTN-- 114

Query: 268 LPLPSGDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
               + +  D I+     D  E +L E  ++ KYF+M P+++ EA  QL+++DHDFY FR
Sbjct: 115 ----TNEHLDSIDKNIFNDKREAKLPEPSIKNKYFEMIPISLEEARKQLDLIDHDFYVFR 170

Query: 91  NEETGEINIVYKRKEGGYGLIIPK 20
           N++  E+ ++YKRK GGYGLI  K
Sbjct: 171 NKKNNELQVIYKRKHGGYGLIQSK 194

[52][TOP]
>UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str.
           AS9601 RepID=A2BPM8_PROMS
          Length = 194

 Score =  103 bits (257), Expect = 8e-21
 Identities = 57/145 (39%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSE 275
           V +     ++RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H +  K  + L    
Sbjct: 57  VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL---- 112

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
              P+ S +     +   ++  E  L E  ++ KYF+M P++  EA  QL+++DHDFY F
Sbjct: 113 ---PIESMESNFLDKALFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVF 169

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           RN++  E+ ++YKR  GGYGLI  K
Sbjct: 170 RNKKNNELQVIYKRNHGGYGLIQSK 194

[53][TOP]
>UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
           CC9311 RepID=Q0ICJ8_SYNS3
          Length = 191

 Score =  103 bits (256), Expect = 1e-20
 Identities = 57/140 (40%), Positives = 86/140 (61%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V     ++RA+E +E  Y SIDLV+S + R+LR+ KE+ +DHG H   P     ++V+
Sbjct: 57  VTVFANGTVIRAQERSENLYASIDLVASKLARQLRRFKERHSDHG-HRTTPTAA--NDVL 113

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
           L       E   E +  +  E +L    VR KYF MP +++ EA  QLE++DHDFY FR+
Sbjct: 114 LT------ERPTEDSLLEGKEAQLPSPGVRRKYFAMPAMSLEEARHQLELIDHDFYLFRD 167

Query: 88  EETGEINIVYKRKEGGYGLI 29
           +E+GE+ ++Y R  GG+G+I
Sbjct: 168 KESGELQVIYHRNHGGFGVI 187

[54][TOP]
>UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803
           RepID=A5GJ89_SYNPW
          Length = 195

 Score =  103 bits (256), Expect = 1e-20
 Identities = 56/141 (39%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V     ++RA+E +E  Y SIDLV+S + R+LR+ K++ +DH  H  G    + SE  
Sbjct: 57  VTVFANGTVIRAQERSENLYASIDLVASKLARQLRRFKDRHSDH-HHSHGH---RASET- 111

Query: 268 LPLPSGDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
            P      +DE  +    D +E +L    VR KYF MPP+T+ +A  QL+++DHDFY FR
Sbjct: 112 -PTTESVLDDEAIVESLLDGKEVQLPSPGVRRKYFSMPPMTLEQARQQLDLIDHDFYLFR 170

Query: 91  NEETGEINIVYKRKEGGYGLI 29
           +  +G++ ++Y+R  GGYG+I
Sbjct: 171 DSASGDLQVIYRRNHGGYGVI 191

[55][TOP]
>UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9301 RepID=A3PBB8_PROM0
          Length = 194

 Score =  103 bits (256), Expect = 1e-20
 Identities = 57/145 (39%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSE 275
           V +     ++RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H +  K  + L    
Sbjct: 57  VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL---- 112

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
              P+ S +     +   ++  E  L E  ++ KYF+M P++  EA  QL+++DHDFY F
Sbjct: 113 ---PIESMESNFLDKAFFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVF 169

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           RN++  E+ ++YKR  GGYGLI  K
Sbjct: 170 RNKKNNELQVIYKRNHGGYGLIQSK 194

[56][TOP]
>UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
           subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP
          Length = 194

 Score =  101 bits (252), Expect = 3e-20
 Identities = 57/144 (39%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +     ++RAEE  E  Y SIDLVS+ + RKLRK KE+      +    N+  +S  I
Sbjct: 57  VTIFANGTIIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHNKKLHNNLVKNKNSYSNAI 116

Query: 268 LPLPSGDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
                 +E D I+     ++ E  L E  ++ KYF+M P+++ EA  QL+ +DHDFY FR
Sbjct: 117 ------EESDSIDKDIFNEEREVRLPEPSIKKKYFEMIPISLEEARKQLDFIDHDFYLFR 170

Query: 91  NEETGEINIVYKRKEGGYGLIIPK 20
           N+   E+ ++YKR  GGYGLI  K
Sbjct: 171 NKLNNELQVIYKRNHGGYGLIQSK 194

[57][TOP]
>UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9303 RepID=A2CBL6_PROM3
          Length = 195

 Score =  101 bits (252), Expect = 3e-20
 Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSE 275
           V V     ++RA+E +E  Y SIDLV+S + R+LR+ KE+ +DH  H  G   +    +E
Sbjct: 57  VTVFANGTVIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTPTTE 115

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ++      +E  I+ +     E  L    VR KYF MPP++V +A  QL+++DHDFY F
Sbjct: 116 AVI------DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARHQLDLIDHDFYLF 169

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
           R +E+G++ ++Y+R  GGYG+I
Sbjct: 170 REQESGQLQVIYRRNHGGYGVI 191

[58][TOP]
>UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
           str. MIT 9313 RepID=Q7V8W0_PROMM
          Length = 195

 Score =  100 bits (250), Expect = 5e-20
 Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSE 275
           V V     ++RA+E +E  Y SIDLV+S + R+LR+ KE+ +DH  H  G   +    +E
Sbjct: 57  VTVFANGTVIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTPTTE 115

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ++      +E  I+ +     E  L    VR KYF MPP++V +A  QL+++DHDFY F
Sbjct: 116 AVI------DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARYQLDLIDHDFYLF 169

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
           R +E+G++ ++Y+R  GGYG+I
Sbjct: 170 REQESGQLQVIYRRNHGGYGVI 191

[59][TOP]
>UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102
           RepID=Q7U8F3_SYNPX
          Length = 195

 Score =  100 bits (250), Expect = 5e-20
 Identities = 51/145 (35%), Positives = 89/145 (61%), Gaps = 1/145 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEV 272
           V V     ++RA+E +E  Y SIDL +S + R+LR+ KE+ +DH   H    +    +E 
Sbjct: 57  VTVFANGTVIRAQERSENLYASIDLAASKLARQLRRWKERHSDHHHSHGHSASTTPATEA 116

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
           +       ++ +++ +  +  E EL +  VR KYF MPP+++ EA  QL+++DHDFY FR
Sbjct: 117 VT------DDSQVDGSLLQGREAELPDPGVRRKYFAMPPMSLEEARRQLDLIDHDFYLFR 170

Query: 91  NEETGEINIVYKRKEGGYGLIIPKG 17
           ++++ ++ ++Y+R  GGYG+I  +G
Sbjct: 171 DKDSDQLQVIYRRNHGGYGVIQARG 195

[60][TOP]
>UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
           Tax=Prochlorococcus marinus str. MIT 9312
           RepID=Q31CD8_PROM9
          Length = 194

 Score =  100 bits (250), Expect = 5e-20
 Identities = 56/143 (39%), Positives = 80/143 (55%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +     ++RAEE  E  Y SIDLVS+ + RKLRK KE+        +  N   F    
Sbjct: 57  VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNYKTNYINQFKNNESF---- 112

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
            P+ S D     +   ++  E  L E  ++ KYF+M P++  EA  QL+++DHDFY FRN
Sbjct: 113 -PIESADSNVLDKTLFKQGREASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRN 171

Query: 88  EETGEINIVYKRKEGGYGLIIPK 20
           ++  E+ ++YKR  GGYGLI  K
Sbjct: 172 KKNNELQVIYKRNHGGYGLIQSK 194

[61][TOP]
>UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE
          Length = 195

 Score =  100 bits (250), Expect = 5e-20
 Identities = 54/140 (38%), Positives = 81/140 (57%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V     ++RA+E +E  Y SIDLV   + R+LRK KE+  DH  H  G +    + + 
Sbjct: 57  VTVFANGTVIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHGHS----ASLT 111

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
                  +E  +E +     E +L E  VR KYF MPP+T+ +A  QL+++DHDFY F++
Sbjct: 112 PSTEEVSDESVVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFKD 171

Query: 88  EETGEINIVYKRKEGGYGLI 29
             TG + ++Y+R  GGYG+I
Sbjct: 172 SATGALQVIYRRNHGGYGVI 191

[62][TOP]
>UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp.
           RS9917 RepID=A3ZA02_9SYNE
          Length = 195

 Score =  100 bits (249), Expect = 7e-20
 Identities = 54/140 (38%), Positives = 85/140 (60%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V     ++RA+E +E  Y SIDLV+S + R+LR+ KE+ +DH  H    +R   +   
Sbjct: 57  VTVFANGTVIRAQERSENLYASIDLVASKLCRQLRRFKERHSDH--HHSNGHRASETP-- 112

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
            P  +  +   I+ +     E +L +  VR KYF MPP+++ EA  QL+++DHDFY FR+
Sbjct: 113 -PTDAIADAAPIDGSLLDGKEVQLPDPGVRRKYFAMPPMSLEEARHQLDVIDHDFYLFRD 171

Query: 88  EETGEINIVYKRKEGGYGLI 29
             TG++ ++Y+R  GGYG+I
Sbjct: 172 ASTGDLQVIYRRNHGGYGVI 191

[63][TOP]
>UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured
           Prochlorococcus marinus clone ASNC2259
           RepID=Q1PKX8_PROMA
          Length = 194

 Score =  100 bits (248), Expect = 9e-20
 Identities = 56/145 (38%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSE 275
           V +     ++RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H +  K  + L    
Sbjct: 57  VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL---- 112

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
              P+ S +     +    +  E  L +  ++ KYF+M P++  EA  QL+++DHDFY F
Sbjct: 113 ---PIESMESNFLDKAFFIEGTEASLPKPSIKNKYFEMTPISSDEARKQLDLIDHDFYVF 169

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           RN++  E+ ++YKR  GGYGLI  K
Sbjct: 170 RNKKNNELQVIYKRNHGGYGLIQSK 194

[64][TOP]
>UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT
           9202 RepID=B9P0E9_PROMA
          Length = 194

 Score =  100 bits (248), Expect = 9e-20
 Identities = 57/145 (39%), Positives = 79/145 (54%), Gaps = 2/145 (1%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +     ++RAEE  E  Y SIDLVS+ + RKLRK KE+      + +  N+  F    
Sbjct: 57  VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF---- 112

Query: 268 LPLPSGDEEDEI--EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
              P  D E     E   +   E  L E  ++ KYF+M P++  EA  QL+++DHDFY F
Sbjct: 113 ---PIADTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVF 169

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           RN +  E+ ++YKR  GGYGLI  K
Sbjct: 170 RNSKNNELQVIYKRNHGGYGLIQSK 194

[65][TOP]
>UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus
           marinus clone HF10-88F10 RepID=Q1PJW9_PROMA
          Length = 194

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 59/147 (40%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSE 275
           V +     ++RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H    K  N+  F  
Sbjct: 57  VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNNQFK--NKESF-- 112

Query: 274 VILPLPSGDEEDEI--EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 101
                PS + E     E   +   E  L E  ++ KYF+M P++  EA  QL+++DHDFY
Sbjct: 113 -----PSENTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFY 167

Query: 100 AFRNEETGEINIVYKRKEGGYGLIIPK 20
            FRN++  ++ ++YKR  GGYGLI  K
Sbjct: 168 VFRNKKNNQLQVIYKRNHGGYGLIQSK 194

[66][TOP]
>UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC
          Length = 195

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 51/141 (36%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEV 272
           V V     ++RA+E +E  Y SIDL +  + R+LR+ KE+ +DH   H    +    ++V
Sbjct: 57  VTVFANGTVIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPSTDV 116

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
           +      ++   +E +  +  E EL +  VR KYF MPP+ + EA  QL+++DHDFY FR
Sbjct: 117 V------NDASPVEASLLQGREAELPDPGVRRKYFAMPPMGLEEARRQLDLIDHDFYLFR 170

Query: 91  NEETGEINIVYKRKEGGYGLI 29
            +E+ ++ ++Y+R  GGYG+I
Sbjct: 171 EKESDQLQVIYRRNHGGYGVI 191

[67][TOP]
>UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str.
           MIT 9215 RepID=A8G3B2_PROM2
          Length = 194

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 57/144 (39%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V +     ++RAEE  E  Y SIDLVS+ + RKLRK KE+      + +  N+  F    
Sbjct: 57  VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF---- 112

Query: 268 LPLPSGDEEDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
             L +  E   ++    KD  E  L E  ++ KYF+M P++  EA  QL+++DHDFY FR
Sbjct: 113 --LIADTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFR 170

Query: 91  NEETGEINIVYKRKEGGYGLIIPK 20
           N +  E+ ++YKR  GGYGLI  K
Sbjct: 171 NNKNNELQVIYKRNHGGYGLIQSK 194

[68][TOP]
>UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. NATL1A RepID=A2C0K6_PROM1
          Length = 194

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 54/143 (37%), Positives = 79/143 (55%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V     ++RA+E +E  Y SIDLV++ + R+LRK KE+   H  H     +   +E I
Sbjct: 57  VTVFANGTVIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHNNQSTKSVQNEKI 116

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
               S D       +  +  E  L    VR KYF+M P+T+ +A  QL+++DHDFY FR 
Sbjct: 117 ENFSSSDH------SLIEGKEPHLPNPGVRRKYFEMDPMTIEQARVQLDLIDHDFYLFRE 170

Query: 88  EETGEINIVYKRKEGGYGLIIPK 20
           EE   + ++Y+R  GGYG+I  K
Sbjct: 171 EEGSALRVIYRRNHGGYGVIQEK 193

[69][TOP]
>UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
           RepID=Q05SE1_9SYNE
          Length = 195

 Score = 98.2 bits (243), Expect = 3e-19
 Identities = 51/141 (36%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEV 272
           V V     ++RA+E +E  Y SIDLV++ + R+LR+ KE+ +DH   H    +    +E 
Sbjct: 57  VTVFANGTVIRAQERSENLYASIDLVANKLSRQLRRYKERHSDHHHSHGHRASTTPTTEA 116

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
           +L      ++  ++ +     E  L +  VR KYF MPP++V EA  QL+++DHDF+ FR
Sbjct: 117 VL------DDSAVDGSLLDGKEAHLPDPGVRRKYFPMPPMSVEEARHQLDLIDHDFFLFR 170

Query: 91  NEETGEINIVYKRKEGGYGLI 29
           +  + E+ ++Y+R  GGYG+I
Sbjct: 171 DASSKELQVIYRRNHGGYGVI 191

[70][TOP]
>UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH
           5701 RepID=A3YVD7_9SYNE
          Length = 195

 Score = 98.2 bits (243), Expect = 3e-19
 Identities = 58/164 (35%), Positives = 90/164 (54%), Gaps = 6/164 (3%)
 Frame = -1

Query: 493 NKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG 314
           N  VA+   E     V V    +++RA+E +E  Y SID+V+  + R+LR+ K++ ++H 
Sbjct: 47  NPRVAQQTAE-----VTVFANGVVIRAQERSENLYASIDMVAGKLSRQLRRYKDRLSNH- 100

Query: 313 RHMKGPNRLKFSEVILPLPSGDEEDEIE---ITPQK---DDEEELIEEVVRTKYFDMPPL 152
            H  G           P   GD+ ++     + P     D E  L    VR KYF MP +
Sbjct: 101 -HGAGS----------PANVGDDTEQPSLEGVLPNDLIGDREPALPVPAVRRKYFSMPAM 149

Query: 151 TVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
           ++ +A+ QLE++DHDFY FR E +G + +VY+R  GG+G+I PK
Sbjct: 150 SLDQALHQLELIDHDFYVFREESSGGLQVVYRRNHGGFGVIQPK 193

[71][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
          Length = 284

 Score = 98.2 bits (243), Expect = 3e-19
 Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 2/144 (1%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMKGPNRLKFSEV 272
           V V     ++R+EE A+  Y SID VS  ++RKLRK+KEK+ +   +H K   + +   +
Sbjct: 142 VTVYTRNGIIRSEEEADDLYASIDAVSDKLERKLRKVKEKKISKRPKHNKNAPKAQTDAI 201

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
           +  + + DE           DE    +EVVR K+  +   TV+EA +++E + H F+AFR
Sbjct: 202 VEEMQAADE--------ALADESMDYDEVVREKFHPVRKCTVYEAAEEMENLGHTFFAFR 253

Query: 91  NEETG-EINIVYKRKEGGYGLIIP 23
           N   G E+N+VYKR  GGYG+I+P
Sbjct: 254 NVAQGNEVNVVYKRDAGGYGVIVP 277

[72][TOP]
>UniRef100_Q8XIE9 30S ribosomal protein S30AE family n=1 Tax=Clostridium perfringens
           RepID=Q8XIE9_CLOPE
          Length = 179

 Score = 97.8 bits (242), Expect = 4e-19
 Identities = 56/149 (37%), Positives = 88/149 (59%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V +++    IL+R EE  +  Y SIDLV   I+R++RK K + +   R+    + L+F+ 
Sbjct: 50  VEIMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                          I P +D +EE   ++V+TK FD+ P+   EA+ Q+E++ HDF+ F
Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150

Query: 94  RNEETGEINIVYKRKEGGYGLIIPKGNGE 8
           ++ ET ++N+VYKRK+G YGLI P G GE
Sbjct: 151 QDPETNQLNVVYKRKDGNYGLIEP-GLGE 178

[73][TOP]
>UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Prochlorococcus marinus str. NATL2A
           RepID=Q46H11_PROMT
          Length = 194

 Score = 97.8 bits (242), Expect = 4e-19
 Identities = 55/143 (38%), Positives = 78/143 (54%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V     ++RA+E +E  Y SIDLV++ + R+LRK KE+   H  H     +   +E  
Sbjct: 57  VTVFANGTVIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHHNQSTKSVQNEDT 116

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
               S D      +T  K  E  L    VR KYF+M P+ + +A  QL+++DHDFY FR 
Sbjct: 117 QNFSSSDHS----LTEGK--EPHLPSPGVRRKYFEMTPMNIEQARVQLDLIDHDFYLFRE 170

Query: 88  EETGEINIVYKRKEGGYGLIIPK 20
           EE   + ++YKR  GGYG+I  K
Sbjct: 171 EEGSALRVIYKRNHGGYGVIQEK 193

[74][TOP]
>UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9211 RepID=A9BE19_PROM4
          Length = 197

 Score = 97.8 bits (242), Expect = 4e-19
 Identities = 54/144 (37%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V     ++RA+E ++  Y SIDLV++ + R+LRK KE+ +DH  H  G      S  +
Sbjct: 57  VTVFANGTVIRAQERSQNLYASIDLVATKLCRQLRKYKERHSDH-HHSHG-----HSASL 110

Query: 268 LPLPSGDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
            P      ED+ I+ +  +  E  L    +R KYF MPP++  +A  QL+++DHDFY F+
Sbjct: 111 TPTTEAVVEDKAIDSSLIQGKEAHLPTPGIRRKYFSMPPMSTEQARHQLDLIDHDFYMFK 170

Query: 91  NEETGEINIVYKRKEGGYGLIIPK 20
             ET ++ ++Y+R  GGYG+I  K
Sbjct: 171 EIETQQLQVIYRRTHGGYGIIQAK 194

[75][TOP]
>UniRef100_Q0TND9 Ribosomal subunit interface protein n=6 Tax=Clostridium perfringens
           RepID=Q0TND9_CLOP1
          Length = 179

 Score = 97.8 bits (242), Expect = 4e-19
 Identities = 56/149 (37%), Positives = 88/149 (59%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V++    IL+R EE  +  Y SIDLV   I+R++RK K + +   R+    + L+F+ 
Sbjct: 50  IEVMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                          I P +D +EE   ++V+TK FD+ P+   EA+ Q+E++ HDF+ F
Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150

Query: 94  RNEETGEINIVYKRKEGGYGLIIPKGNGE 8
           ++ ET ++N+VYKRK+G YGLI P G GE
Sbjct: 151 QDPETNQLNVVYKRKDGNYGLIEP-GLGE 178

[76][TOP]
>UniRef100_Q0SR10 Ribosomal subunit interface protein n=1 Tax=Clostridium perfringens
           SM101 RepID=Q0SR10_CLOPS
          Length = 179

 Score = 97.4 bits (241), Expect = 6e-19
 Identities = 54/144 (37%), Positives = 85/144 (59%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V++    IL+R EE  +  Y SIDLV   I+R++RK K + +   R+    + L+F+ 
Sbjct: 50  VEVMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                          I P +D +EE   ++V+TK FD+ P+   EA+ Q+E++ HDF+ F
Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150

Query: 94  RNEETGEINIVYKRKEGGYGLIIP 23
           ++ ET ++N+VYKRK+G YGLI P
Sbjct: 151 QDPETNQLNVVYKRKDGNYGLIEP 174

[77][TOP]
>UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109
           RepID=D0CH01_9SYNE
          Length = 195

 Score = 97.4 bits (241), Expect = 6e-19
 Identities = 50/141 (35%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEV 272
           V V     ++RA+E +E  Y SIDL +  + R+LR+ KE+ +DH   H    +    ++V
Sbjct: 57  VTVFANGTVIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPSTDV 116

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
           +      ++   +E +  +  E EL +  VR KYF MPP+ + +A  QL+++DHDFY FR
Sbjct: 117 V------NDASPVESSLLQGREAELPDPGVRRKYFAMPPMGLEDARRQLDLIDHDFYLFR 170

Query: 91  NEETGEINIVYKRKEGGYGLI 29
            +E+ ++ ++Y+R  GGYG+I
Sbjct: 171 EKESDQLQVIYRRNHGGYGVI 191

[78][TOP]
>UniRef100_Q5KV92 Ribosomal protein S30EA n=1 Tax=Geobacillus kaustophilus
           RepID=Q5KV92_GEOKA
          Length = 183

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 56/142 (39%), Positives = 86/142 (60%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + +  +L+RAEE  E  Y +IDLV+  ++R++RK K K      + K  +R K ++
Sbjct: 53  IEVTIPMPHLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKEAK 107

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           +  P+PSG    E       ++EEE   E+VRTK+F + P+   EAI Q+ ++ H+F+ F
Sbjct: 108 LAAPVPSGASAAE-------NNEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 158

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            N ET   NIVY+RK+G YGLI
Sbjct: 159 TNAETNRTNIVYRRKDGKYGLI 180

[79][TOP]
>UniRef100_A7NNI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Roseiflexus castenholzii DSM 13941
           RepID=A7NNI5_ROSCS
          Length = 198

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 51/144 (35%), Positives = 84/144 (58%)
 Frame = -1

Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
           V VV    +LVRAE  A   Y +ID V   +QR++ + K+K    GR      R +  ++
Sbjct: 62  VTVVGDHGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDKHWRRGRL-----RRQGGQI 116

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
           +  LP  +        P   DEEE    +VRTK F + P+   EA++Q+E++ H F+ F+
Sbjct: 117 VEALPEMNAA-----APAPIDEEEQRPRIVRTKEFQVKPMYSDEAVEQMELLGHSFFIFQ 171

Query: 91  NEETGEINIVYKRKEGGYGLIIPK 20
           + +TG++N++Y+R++G YGLI+P+
Sbjct: 172 DADTGKLNVLYRRQDGNYGLIVPE 195

[80][TOP]
>UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
           49176 RepID=C4G2X0_ABIDE
          Length = 175

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 56/145 (38%), Positives = 81/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V V V+  ++RAE+ ++  Y SIDL+  II+R+LR+ K K  D  +         F+ 
Sbjct: 50  VEVTVPVKGHIIRAEQVSDDMYVSIDLIEDIIERQLRRYKTKIVDSKQSASN-----FTS 104

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
             +               Q DD E+   +V+RTK F + P+   EA  Q+E+++H FY F
Sbjct: 105 AFM---------------QDDDYEDEDVKVIRTKRFAVKPMDPEEACVQMELLNHSFYVF 149

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           RN ET E+N+VYKRK G YGLI P+
Sbjct: 150 RNAETDEVNVVYKRKNGDYGLIEPE 174

[81][TOP]
>UniRef100_B9NGT0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NGT0_POPTR
          Length = 71

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 45/54 (83%), Positives = 47/54 (87%)
 Frame = -1

Query: 163 MPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGNGEVD 2
           MPPLTV EAI+QLE VDHDFY FRNEETGEINIVYKRK GGYG IIPKGN E +
Sbjct: 1   MPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYKRKAGGYGPIIPKGNYEAE 54

[82][TOP]
>UniRef100_Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Deinococcus geothermalis DSM 11300
           RepID=Q1IYK5_DEIGD
          Length = 186

 Score = 94.4 bits (233), Expect = 5e-18
 Identities = 54/144 (37%), Positives = 78/144 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + V   ++RAEEH    Y +ID  S +++R+LRK K K   H +    P       
Sbjct: 56  VEVQLNVPNGIIRAEEHHADMYAAIDRASDVLERQLRKFKTKYLRHRQEAAPP------- 108

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
              P P   E D         D+ E   E+VRTK FD+ P++  +A+ Q+E + HDFY F
Sbjct: 109 ---PQPGLAEAD----VNAGLDDTEFRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYVF 161

Query: 94  RNEETGEINIVYKRKEGGYGLIIP 23
           +N +TG   +VY+R++G YGLI P
Sbjct: 162 KNMDTGGCAVVYRRRDGHYGLIEP 185

[83][TOP]
>UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus
           RepID=Q7VDH9_PROMA
          Length = 195

 Score = 94.0 bits (232), Expect = 6e-18
 Identities = 52/146 (35%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS--- 278
           V V     ++RA+E ++  Y SIDLVS+ + R+LR+ KE+ +DH  H    +R   +   
Sbjct: 57  VTVFANGTVIRAQERSQNLYASIDLVSNKLCRQLRRYKERHSDH--HHSPGHRASITPTT 114

Query: 277 EVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98
           E +L      E+  I  +  +  E +L +  +R KYF M P+ + +A  QL+++DHDFY 
Sbjct: 115 EEVL------EDKSINGSLVEGKEAKLPKPGIRRKYFPMHPMNIEQAQHQLDLIDHDFYL 168

Query: 97  FRNEETGEINIVYKRKEGGYGLIIPK 20
           F+  E+ ++ ++Y+RK GGYG+I  K
Sbjct: 169 FKEAESEQLQVIYRRKNGGYGVIQAK 194

[84][TOP]
>UniRef100_B8BRE6 Light-repressed protein a n=1 Tax=Thalassiosira pseudonana CCMP1335
           RepID=B8BRE6_THAPS
          Length = 198

 Score = 94.0 bits (232), Expect = 6e-18
 Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFSE 275
           VV  ++    R  E +   Y SIDLV++ + RKLRK KE+  D  HG    G N    +E
Sbjct: 62  VVTTLKGTTFRVAESSPDMYASIDLVAARLARKLRKYKERRLDGYHGGPNMGEN---IAE 118

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           V+  +   + ED  E     D ++ ++ +V  T      P+++ EAI  L+ +DHDFY F
Sbjct: 119 VLNAIEVDESEDGAEEESYIDPDQAVVTKVKST------PISIKEAIFALDYIDHDFYVF 172

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           R+EET E+++VYKR  GG GLI P+
Sbjct: 173 RDEETNEVSVVYKRNAGGVGLIQPE 197

[85][TOP]
>UniRef100_Q1AVJ5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ5_RUBXD
          Length = 189

 Score = 93.6 bits (231), Expect = 8e-18
 Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 14/171 (8%)
 Frame = -1

Query: 493 NKLVAEAAVESI----PVVVVVEVEKI-------LVRAEEHAETTYGSIDLVSSIIQRKL 347
           ++ VA A VE I    P +   EV +        +++A E +E  Y SID +S  ++R++
Sbjct: 34  DRSVARAEVELIHERNPSIAASEVAETTLFINGAVLKAREASEDMYASIDRMSDKLERQV 93

Query: 346 RKIKEKETD--HGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIE-EVVRT 176
           ++ + ++ D  HGR       LK            E    E  P   +EEE IE  +VRT
Sbjct: 94  KRYRGRQVDRWHGR-------LK----------NHEGARAEPQPFVAEEEEDIEPRIVRT 136

Query: 175 KYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23
           K F M P++  EA+ Q+E++DHDF+ F N +TG+IN+VY+R++G YGLI P
Sbjct: 137 KQFQMKPMSAEEAVLQMELLDHDFFVFTNADTGDINVVYRRRDGNYGLIEP 187

[86][TOP]
>UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH
          Length = 178

 Score = 93.6 bits (231), Expect = 8e-18
 Identities = 55/145 (37%), Positives = 80/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + ++  +VRAE+ +   Y SIDLV  +I+R+L+K K K  D  +     N   F +
Sbjct: 50  IEVTIPMKGNIVRAEQVSNDMYASIDLVEEVIERQLKKYKSKLKDMNQSAANFNPSFFED 109

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           V+        ED         DEE++   + R K F M P+   EA  Q+E++ H+FY F
Sbjct: 110 VL-------NEDS--------DEEDI--NITRVKRFAMKPMDAEEACVQMELLGHNFYVF 152

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           RN ET E+N+VYKRK   YGLI P+
Sbjct: 153 RNAETDEVNVVYKRKGNSYGLIEPE 177

[87][TOP]
>UniRef100_C6D4V5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Paenibacillus sp. JDR-2 RepID=C6D4V5_PAESJ
          Length = 182

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 62/180 (34%), Positives = 98/180 (54%), Gaps = 9/180 (5%)
 Frame = -1

Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIP---------VVVVVEVEKILVRAEEHAETTY 389
           T A++   VK+++ +     A A+  ++          V V + +  +++RAE+ +E  Y
Sbjct: 13  TEALREYAVKKISRLEKYFEAPASETTVTLSVTKGKHAVEVTIPLVGVMLRAEDKSEDMY 72

Query: 388 GSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDD 209
            SID+V   ++R++RK K K     RH  G   L F E       G  +  + +    D+
Sbjct: 73  SSIDVVVDKLERQIRKHKTKMNRKFRHESGVKAL-FKE-------GLSQTAVSVM---DE 121

Query: 208 EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
           E+EL  E+VRTK F + P+ V EAI Q+ MV H+F+ F N +  E+N+VYKR +G YGLI
Sbjct: 122 EDEL--ELVRTKRFMLKPMDVEEAILQMNMVGHNFFVFSNIDNKEVNVVYKRSDGKYGLI 179

[88][TOP]
>UniRef100_C4L5L1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Exiguobacterium sp. AT1b RepID=C4L5L1_EXISA
          Length = 187

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 57/149 (38%), Positives = 82/149 (55%)
 Frame = -1

Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287
           E   V V + +  +L+RAE+     Y +IDLV   ++R++RK K K    GR  +G    
Sbjct: 49  EKQKVEVTIPMPNLLLRAEDINLDMYAAIDLVVDKLERQIRKHKTKLNRKGRGKEGG--- 105

Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107
              E    L   D+      TP   DE+E   E+VRTK F + P+   EAI Q++M+ H 
Sbjct: 106 -VGEYFKSLEGPDD------TPAVYDEDEAELELVRTKRFTLKPMDTEEAILQMDMLGHS 158

Query: 106 FYAFRNEETGEINIVYKRKEGGYGLIIPK 20
           F+ F + ETG  N+VY+RK+G YGLI P+
Sbjct: 159 FFVFSDAETGNTNVVYRRKDGKYGLIEPE 187

[89][TOP]
>UniRef100_A7GUW3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GUW3_BACCN
          Length = 179

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 63/145 (43%), Positives = 83/145 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +L+RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 50  VEVTIPFTDLLLRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSAKTAF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP   G EE +         E+EL  E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILPDQLGQEEVQ---------EDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 154

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E NIVY RK+G YGLI  K
Sbjct: 155 TNADTNETNIVYGRKDGKYGLIEAK 179

[90][TOP]
>UniRef100_C8W7H2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Atopobium parvulum DSM 20469 RepID=C8W7H2_ATOPD
          Length = 196

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 55/143 (38%), Positives = 78/143 (54%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V V   +VR    ++  Y +ID  +  + R+LRK K K  +   HMK       SE  
Sbjct: 59  VTVFVRNNVVRVTASSDDMYAAIDEAADKVSRQLRKYKTKVVERRHHMK-------SERG 111

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
           + L   D  + IEI       E+L +++VR KY D+ P+T  EA+ Q +++ HDFY F N
Sbjct: 112 IALTQEDLANLIEIPA-----EDLDDQLVREKYVDLEPMTEEEALVQTDLLGHDFYVFVN 166

Query: 88  EETGEINIVYKRKEGGYGLIIPK 20
             TG  N++Y RK GGYG+I PK
Sbjct: 167 SSTGLTNVIYHRKNGGYGIIKPK 189

[91][TOP]
>UniRef100_C2D8Z3 Possible ribosome-associated inhibitor A n=1 Tax=Atopobium vaginae
           DSM 15829 RepID=C2D8Z3_9ACTN
          Length = 192

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 55/143 (38%), Positives = 73/143 (51%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V V V   +VR E  +E  Y +ID  S  + R+LRK K +  D  +  + P         
Sbjct: 59  VTVYVRNNVVRVEASSEDMYAAIDAASDKVTRQLRKYKTRIIDRKQRSQAP--------- 109

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
            P PS D  D I+     D        +VR KY D+ P+T  EA+ Q +++ HDFY F N
Sbjct: 110 APAPSKDLSDLIDEVADDD-------MLVREKYIDLHPMTEEEALVQTDLIGHDFYVFEN 162

Query: 88  EETGEINIVYKRKEGGYGLIIPK 20
             TG IN+VY R  GGYG+I PK
Sbjct: 163 ATTGLINVVYHRHNGGYGIIKPK 185

[92][TOP]
>UniRef100_A8S366 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
           BAA-613 RepID=A8S366_9CLOT
          Length = 187

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 56/145 (38%), Positives = 85/145 (58%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+   +RAEE +   Y SIDLV  II+R++R+ ++K  D     K    + FS+
Sbjct: 61  IEVTIPVKGNTIRAEESSTDMYVSIDLVEEIIERQIRRYRKKLID-----KKQAAISFSQ 115

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
             +     +EEDE++     DDE +    +V+TK F + P    EA  Q+EM+ H+FY F
Sbjct: 116 AFI-----EEEDEVQ-----DDEIQ----IVKTKKFAIKPTIPEEACLQMEMLGHNFYVF 161

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T ++N+VYKRK G YGLI P+
Sbjct: 162 LNADTDQVNVVYKRKNGTYGLIEPE 186

[93][TOP]
>UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
           16795 RepID=B0A7Y1_9CLOT
          Length = 187

 Score = 92.8 bits (229), Expect = 1e-17
 Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
 Frame = -1

Query: 511 EVAAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 332
           EV   V+   A+  +E    V ++ +   ++RAE+  E  Y +ID+V   + ++LR+ K 
Sbjct: 42  EVKVTVSARKAKQKIE----VTIIPINGPIIRAEDSEENLYAAIDVVYDKLNKQLRRYKN 97

Query: 331 KETDHGRHM-KGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPP 155
           K    G++  KG   ++F  +           E      KD E +++ E  R K FDM P
Sbjct: 98  KLK--GKYQSKGQESIRFQNI-----------EDNAAEDKDGEFDIVIE--RHKKFDMKP 142

Query: 154 LTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
           ++  EA+ Q+E+V HDFY FRN +T EI+IVY+R+ GGYGLI
Sbjct: 143 MSPEEAVLQMELVGHDFYMFRNIDTDEISIVYRRETGGYGLI 184

[94][TOP]
>UniRef100_C5EVT1 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
           1_7_47FAA RepID=C5EVT1_9FIRM
          Length = 187

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 55/145 (37%), Positives = 84/145 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+   +RAEE +   Y SIDLV  +I+R++R+ ++K  D     K    + FS+
Sbjct: 61  IEVTIPVKGNTIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAAISFSQ 115

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
             +     +EEDE++     DDE +    +V+TK F + P    EA  Q+EM+ H FY F
Sbjct: 116 AFI-----EEEDEVQ-----DDEIQ----IVKTKKFAIKPTIPEEACLQMEMLGHSFYVF 161

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T ++N+VYKRK G YGLI P+
Sbjct: 162 LNADTDQVNVVYKRKNGTYGLIEPE 186

[95][TOP]
>UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N7A9_9CHLO
          Length = 245

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH--GRHMKGPNRLKFSE 275
           V V     +VR+EE A+  Y SID VS  I+RKLRKIKEK+     G+    P + + ++
Sbjct: 105 VTVYTRNGVVRSEEEADNLYASIDAVSDKIERKLRKIKEKKNSKKAGKTKANP-KAQTAD 163

Query: 274 VILPLPSGDE--EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 101
           ++      DE   DEIE            EE V  KY  +   T  EA +++E + H FY
Sbjct: 164 IVAAAAEADEARADEIE-----------FEETVGVKYMAVKTSTAMEAAEEMESLGHVFY 212

Query: 100 AFRNEET-GEINIVYKRKEGGYGLIIP 23
           AF+N+   GE+N+VYKR  GGY +++P
Sbjct: 213 AFKNKANGGEVNVVYKRDAGGYAVLVP 239

[96][TOP]
>UniRef100_Q04E96 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Oenococcus oeni PSU-1 RepID=Q04E96_OENOB
          Length = 190

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 52/146 (35%), Positives = 84/146 (57%)
 Frame = -1

Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287
           ++  + V + +  + +RAEE     Y ++DLVS+ + R++RK K +     R  +G   +
Sbjct: 50  KTFKIEVTIPLPYLTLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGI 108

Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107
            F+E I P+PS   ED+      K D       V+R K   + P+ + EA+ Q+EM+DHD
Sbjct: 109 DFNEAIDPVPSDTNEDK------KID-------VIRRKNLSLKPMDIEEAVLQMEMLDHD 155

Query: 106 FYAFRNEETGEINIVYKRKEGGYGLI 29
           F+ F N +T +++IVYKR +G YGLI
Sbjct: 156 FFLFLNSDTNQLDIVYKRDDGKYGLI 181

[97][TOP]
>UniRef100_C1CWW9 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Deinococcus deserti VCD115 RepID=C1CWW9_DEIDV
          Length = 188

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 53/144 (36%), Positives = 79/144 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + V   ++RAEEH    Y +ID  S +++R+LRK K       R+MK  +      
Sbjct: 56  VEVQLNVPNGIIRAEEHHSDMYAAIDKASDVLERQLRKFKT------RYMKQRHET---- 105

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
             +P P G    E ++    DD  E + E+VR K FDM P++  +A+ Q+E + HDFY F
Sbjct: 106 --VPQP-GPGPAEADVNAGLDDVSEFMPEIVRQKRFDMRPMSPEDAVTQMEALGHDFYVF 162

Query: 94  RNEETGEINIVYKRKEGGYGLIIP 23
            N  +    +VY+R++G YGLI P
Sbjct: 163 MNMGSNACGVVYRRRDGHYGLIEP 186

[98][TOP]
>UniRef100_B1YLH2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Exiguobacterium sibiricum 255-15 RepID=B1YLH2_EXIS2
          Length = 187

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 57/149 (38%), Positives = 82/149 (55%)
 Frame = -1

Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287
           E   V V + +  +L+RAE+     Y +IDLV   ++R++RK K K    GR   G    
Sbjct: 49  EKQKVEVTIPMPNLLLRAEDVNGDMYAAIDLVVDKLERQIRKHKTKINRRGRAKDGGIGE 108

Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107
            F  +        E  E E    ++DE EL  E+VRTK F + P+   EAI Q++M+ H 
Sbjct: 109 YFKTL--------EGPEAEAPVYEEDEAEL--ELVRTKRFTLKPMDTEEAILQMDMLGHT 158

Query: 106 FYAFRNEETGEINIVYKRKEGGYGLIIPK 20
           F+ F + ETG  N+VY+RK+G YGLI P+
Sbjct: 159 FFVFSDAETGNTNVVYRRKDGRYGLIEPE 187

[99][TOP]
>UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
           27756 RepID=A5KKP2_9FIRM
          Length = 198

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 52/146 (35%), Positives = 83/146 (56%), Gaps = 1/146 (0%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+  ++R+E+ +   Y SIDLV  +I+R+LRK K K     +            
Sbjct: 63  IEVTIPVKGSIIRSEQTSSDMYVSIDLVEEVIERQLRKYKNKLVAKSQ----------GH 112

Query: 274 VILPLPSGDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98
               +PSG  + E IE   +  D++E+   +VRTK F + P+   +A  Q+E++ H F+ 
Sbjct: 113 PTAAVPSGSIKKEFIESDDESSDDDEI--RIVRTKKFGIKPMFPEDACIQMELLGHSFFV 170

Query: 97  FRNEETGEINIVYKRKEGGYGLIIPK 20
           F N ET E+N+VYKRK+G +GLI P+
Sbjct: 171 FSNAETDEVNVVYKRKDGSFGLIEPE 196

[100][TOP]
>UniRef100_A0NI00 Ribosomal subunit interface protein n=1 Tax=Oenococcus oeni ATCC
           BAA-1163 RepID=A0NI00_OENOE
          Length = 190

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 52/146 (35%), Positives = 84/146 (57%)
 Frame = -1

Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287
           ++  + V + +  + +RAEE     Y ++DLVS+ + R++RK K +     R  +G   +
Sbjct: 50  KTFKIEVTIPLPYLTLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGI 108

Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107
            F+E I P+PS   ED+      K D       V+R K   + P+ + EA+ Q+EM+DHD
Sbjct: 109 DFNEAIDPVPSDTNEDK------KID-------VIRRKTLSLKPMDIEEAVLQMEMLDHD 155

Query: 106 FYAFRNEETGEINIVYKRKEGGYGLI 29
           F+ F N +T +++IVYKR +G YGLI
Sbjct: 156 FFLFLNSDTNQLDIVYKRDDGKYGLI 181

[101][TOP]
>UniRef100_C2KX79 Ribosome-associated inhibitor A n=1 Tax=Oribacterium sinus F0268
           RepID=C2KX79_9FIRM
          Length = 176

 Score = 91.7 bits (226), Expect = 3e-17
 Identities = 53/145 (36%), Positives = 81/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+  ++RAEE     Y SIDLV  +++R++RK K K     RH           
Sbjct: 50  IEVTIPVKGSVIRAEEATPDMYQSIDLVVDVLERQIRKYKNKLIQ--RHQAA-------- 99

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                 S    + IE  P +D+EE    ++VRTK+ D+ P+T  EA  Q+E++ H F+ F
Sbjct: 100 ------SDFSSEFIEEKPAQDEEEI---KIVRTKHIDLKPMTAEEACLQMELLGHSFFVF 150

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           ++  TG++N+VYKRK   YGLI P+
Sbjct: 151 QDGNTGKVNVVYKRKANSYGLIEPE 175

[102][TOP]
>UniRef100_C0CVD1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
           DSM 15981 RepID=C0CVD1_9CLOT
          Length = 176

 Score = 91.7 bits (226), Expect = 3e-17
 Identities = 53/145 (36%), Positives = 80/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+   +RAEE +   Y SIDLV  +I+R++R+ ++K  D     K    L FS+
Sbjct: 50  IEVTIPVKGNTIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAALSFSQ 104

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
             +     ++ED+I I              V+TK F + P    EA  Q+EM+ H+FY F
Sbjct: 105 AFIDEEEDEQEDDIRI--------------VKTKKFAIKPTIPEEACLQMEMLGHNFYVF 150

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T ++N+VYKRK G YGLI P+
Sbjct: 151 LNSDTDQVNVVYKRKNGTYGLIEPE 175

[103][TOP]
>UniRef100_B9I261 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I261_POPTR
          Length = 118

 Score = 91.7 bits (226), Expect = 3e-17
 Identities = 47/90 (52%), Positives = 60/90 (66%)
 Frame = -1

Query: 352 KLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTK 173
           KLRKIK+KE+DHGRHMKG N+LK  E     P   E + +  T  +  +++ ++E V TK
Sbjct: 28  KLRKIKDKESDHGRHMKGFNKLKVRE-----PMSQEVENVADTVSQRKDDDNLDEAVHTK 82

Query: 172 YFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 83
           YFDMPPLTV EAI +L  VDH FY F + E
Sbjct: 83  YFDMPPLTVHEAIVRLGNVDHAFYGFGHAE 112

[104][TOP]
>UniRef100_A5UVY5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Roseiflexus sp. RS-1 RepID=A5UVY5_ROSS1
          Length = 193

 Score = 91.3 bits (225), Expect = 4e-17
 Identities = 52/145 (35%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
 Frame = -1

Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
           V VV    +LVRAE  A   Y +ID V   +QR++ + K+K   H R  +G  R +  ++
Sbjct: 57  VTVVGDHGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDK---HWR--RGKLRRQGGQI 111

Query: 271 ILPLPSGDEEDEIEITPQKD-DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           +  LP      E+      D  EEE    +VRTK F + P+   EA++Q+E++ H+F+ F
Sbjct: 112 VEALP------ELAAPSLADTQEEEERPRIVRTKEFQVKPMYSDEAVEQMELLGHNFFIF 165

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           ++ +TG++N++Y+R++G YGLI+P+
Sbjct: 166 QDADTGKLNVLYRRQDGNYGLIVPE 190

[105][TOP]
>UniRef100_Q7XYJ6 Ribosomal protein rpS22 (Fragment) n=1 Tax=Bigelowiella natans
           RepID=Q7XYJ6_BIGNA
          Length = 170

 Score = 91.3 bits (225), Expect = 4e-17
 Identities = 64/172 (37%), Positives = 88/172 (51%), Gaps = 14/172 (8%)
 Frame = -1

Query: 493 NKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG 314
           N  V E A   I V V V+  K+ +R    + + Y SIDLV+ ++ RKLRK KE++   G
Sbjct: 6   NPAVKENA-HKIEVTVYVKDSKV-IRGSVSSVSEYSSIDLVTDLVNRKLRKYKERK--EG 61

Query: 313 RHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIE--------------EVVRT 176
           +      R  ++  I      D  D      Q  D+ +  E               VVR 
Sbjct: 62  KRTASGVRTFYTNDI-----SDSSDVEGAAVQGQDDVQQEEYSGIPEGYAPVEDVSVVRR 116

Query: 175 KYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
           K F MPP+++ +A   L+ +DHDFY FRN ET EIN+VY+R EGG GLI P+
Sbjct: 117 KKFPMPPISIEDATLCLDYLDHDFYVFRNSETKEINVVYRRAEGGVGLIEPE 168

[106][TOP]
>UniRef100_C0Z6T8 Putative uncharacterized protein yvyD n=1 Tax=Brevibacillus brevis
           NBRC 100599 RepID=C0Z6T8_BREBN
          Length = 185

 Score = 90.9 bits (224), Expect = 5e-17
 Identities = 47/145 (32%), Positives = 85/145 (58%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + +  +++RAEE  E  Y +IDLV   ++R++RK K K     R ++  +  + ++
Sbjct: 52  IEVTIPLSGVIIRAEETHEDMYAAIDLVVEKLERQIRKHKTKLM---RKLRVDSTGRIAQ 108

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                    E   + +     DEE++  ++VRTK FD+ P+   EA+ Q++M+ H F+ F
Sbjct: 109 --------RESQPVAVMIPDVDEEDIDIDIVRTKRFDLKPMDAQEAVMQMDMLGHSFFVF 160

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           +N +T ++++VY+R +G YGLI PK
Sbjct: 161 QNSDTNDVSVVYRRNDGRYGLIEPK 185

[107][TOP]
>UniRef100_Q2B1U0 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. NRRL
           B-14911 RepID=Q2B1U0_9BACI
          Length = 184

 Score = 90.9 bits (224), Expect = 5e-17
 Identities = 55/142 (38%), Positives = 80/142 (56%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + ++ +++RAEE  E  Y +IDL+   ++R++RK K K     R  KG   L F+ 
Sbjct: 53  VEVTIPMQNLVLRAEEDHEDMYAAIDLIVDKLERQIRKHKTKVNRKFRE-KGSPTLMFAS 111

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                      DE E    ++++ +L  EVVR K FD+ P+   EAI Q+ ++ H FY F
Sbjct: 112 F----------DEPEAPVLEEEDNDL--EVVRQKSFDLKPMDNEEAILQMNLLGHSFYVF 159

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            N ET   N+VYKRK+G YGLI
Sbjct: 160 TNAETNRTNVVYKRKDGRYGLI 181

[108][TOP]
>UniRef100_C8NDQ1 Ribosomal subunit interface protein n=1 Tax=Granulicatella adiacens
           ATCC 49175 RepID=C8NDQ1_9LACT
          Length = 186

 Score = 90.9 bits (224), Expect = 5e-17
 Identities = 53/142 (37%), Positives = 83/142 (58%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  +++RAEE +   YGSIDLV   ++R++RK K K       +   +R K  +
Sbjct: 60  VEVTIPLPYLVLRAEETSIDLYGSIDLVVDKLERQVRKHKTK-------INRKSREKGFD 112

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           ++LP             P+  +EEE   E+VRTK  D+ P+   EA+ Q+ M+ H+F+ +
Sbjct: 113 IVLPT-----------LPEAPEEEETGLEIVRTKRIDLKPMDSEEAVLQMNMLGHNFFIY 161

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
           ++ ET E NIVY+RK+G YGLI
Sbjct: 162 QDAETNETNIVYRRKDGKYGLI 183

[109][TOP]
>UniRef100_C6PFL3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Thermoanaerobacter italicus Ab9 RepID=C6PFL3_9THEO
          Length = 181

 Score = 90.9 bits (224), Expect = 5e-17
 Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 9/182 (4%)
 Frame = -1

Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVV--------VVVEVEKILVRAEEHAETTYG 386
           T  ++  VVK+V+ +      +  V ++  V        + +  + I+ RAEE ++  YG
Sbjct: 14  TDGLRDAVVKKVSKLSKYFTEDTEVRTVLSVQKNHHIAEITIPFKGIIFRAEEVSDDMYG 73

Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI-LPLPSGDEEDEIEITPQKDD 209
           SID V   I+R++ K K K           NR   +E I   +PS  +E        K++
Sbjct: 74  SIDRVVDKIERQILKHKTKLK---------NRFGANESIRFEIPSVYQE-------AKEE 117

Query: 208 EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
           EEE   E+V+TK F + P++  EAI Q+ ++ H+F+ F N +T  IN+VYKRK+G YGLI
Sbjct: 118 EEETSFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKYGLI 177

Query: 28  IP 23
            P
Sbjct: 178 EP 179

[110][TOP]
>UniRef100_B7IPV2 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
           RepID=B7IPV2_BACC2
          Length = 180

 Score = 90.9 bits (224), Expect = 5e-17
 Identities = 60/145 (41%), Positives = 80/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +L+RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 50  VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP          E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVMDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[111][TOP]
>UniRef100_B4BN91 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Geobacillus sp. G11MC16 RepID=B4BN91_9BACI
          Length = 182

 Score = 90.9 bits (224), Expect = 5e-17
 Identities = 54/142 (38%), Positives = 84/142 (59%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + +  +L+RAEE  +  Y +IDLV+  ++R++RK K K      + K  +R K  +
Sbjct: 53  IEVTIPIPHLLLRAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVK 107

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           +  P+P+G    E       +DEE    E+VRTK+F + P+   EAI Q+ ++ H+F+ F
Sbjct: 108 LAAPVPNGAAAAE-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            N ET   NIVY+RK+G YGLI
Sbjct: 158 TNAETNRTNIVYRRKDGRYGLI 179

[112][TOP]
>UniRef100_B0G387 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC
           27755 RepID=B0G387_9FIRM
          Length = 177

 Score = 90.9 bits (224), Expect = 5e-17
 Identities = 51/145 (35%), Positives = 84/145 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+  ++R+E+ ++  Y SIDLV  +I+R+LRK K K     ++ +G N   FS+
Sbjct: 50  IEVTIPVKGNIIRSEQESDDMYVSIDLVEEVIERQLRKYKNKLV--AKNQEGNN---FSK 104

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            +       E+DE++I              VRTK F + P+   +A  Q+E++ H+F+ F
Sbjct: 105 TLFETEESIEDDEVKI--------------VRTKRFGIKPMYPEDACVQMELLGHNFFVF 150

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N E  E+N+VYKRK+G +GLI P+
Sbjct: 151 FNAENEEVNVVYKRKDGSFGLIEPE 175

[113][TOP]
>UniRef100_A4ISU0 Ribosomal subunit interface protein n=1 Tax=Geobacillus
           thermodenitrificans NG80-2 RepID=A4ISU0_GEOTN
          Length = 182

 Score = 90.5 bits (223), Expect = 7e-17
 Identities = 54/142 (38%), Positives = 84/142 (59%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + +  +L+RAEE  +  Y +IDLV+  ++R++RK K K      + K  +R K  +
Sbjct: 53  IEVTIPIPHLLLRAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVK 107

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           +  P+P+G    E       +DEE    E+VRTK+F + P+   EAI Q+ ++ H+F+ F
Sbjct: 108 LAAPVPNGAAAVE-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            N ET   NIVY+RK+G YGLI
Sbjct: 158 TNAETNRTNIVYRRKDGRYGLI 179

[114][TOP]
>UniRef100_B5UPY3 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
           RepID=B5UPY3_BACCE
          Length = 180

 Score = 90.5 bits (223), Expect = 7e-17
 Identities = 60/145 (41%), Positives = 80/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +L+RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 50  VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP          E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[115][TOP]
>UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
           13814 RepID=A6BHR0_9FIRM
          Length = 178

 Score = 90.5 bits (223), Expect = 7e-17
 Identities = 57/145 (39%), Positives = 83/145 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+  LVR+E+ +   Y SIDLV  +I+R+LRK K K     R  +G N   F +
Sbjct: 50  IEVTIPVKGGLVRSEQESSDMYVSIDLVEEVIERQLRKYKNKLV--AREQEGGN---FKQ 104

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                   D ED IE      D+ E+  ++VRTK F   P+   +A  Q+E++ HDFY F
Sbjct: 105 EFF-----DAEDNIE------DDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFYVF 151

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N E+ E+N+VY+RK G +GLI P+
Sbjct: 152 CNAESDEVNVVYRRKNGTFGLIEPE 176

[116][TOP]
>UniRef100_B9RPC0 LRX1, putative n=1 Tax=Ricinus communis RepID=B9RPC0_RICCO
          Length = 538

 Score = 90.5 bits (223), Expect = 7e-17
 Identities = 39/50 (78%), Positives = 40/50 (80%), Gaps = 7/50 (14%)
 Frame = +1

Query: 409 PQPAPVFSPPPPPP---PPVYSPPPPPPPVYSPPPPP----PSPPPPSPP 537
           P P PV+SPPPPPP   PPVYSPPPPPPPVYSPPPPP    P PPPPSPP
Sbjct: 259 PPPPPVYSPPPPPPSPPPPVYSPPPPPPPVYSPPPPPPVYSPPPPPPSPP 308

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 40/57 (70%), Positives = 41/57 (71%), Gaps = 14/57 (24%)
 Frame = +1

Query: 409 PQPAPVFSPPPPPP------PPVYSPPPPP--------PPVYSPPPPPPSPPPPSPP 537
           P P PV+SPPPPPP      PPVYSPPPPP        PPVYSPPPPPPSPPPPSPP
Sbjct: 292 PPPPPVYSPPPPPPSPPPPPPPVYSPPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPP 348

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 35/43 (81%), Positives = 35/43 (81%)
 Frame = +1

Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537
           P P P    PPPPPPPVYS PPPPPPVYSPPPPPPSPPPP PP
Sbjct: 272 PSPPPPVYSPPPPPPPVYS-PPPPPPVYSPPPPPPSPPPPPPP 313

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 36/53 (67%), Positives = 38/53 (71%), Gaps = 8/53 (15%)
 Frame = +1

Query: 409 PQPAPVFSPPPPP---PPPVY---SPPPPPPPVYSPPPPP--PSPPPPSPPSC 543
           P P+P  SPPPPP   PPP+Y   SPPPPP PVYSPPPPP    PPPPSPP C
Sbjct: 405 PPPSPPHSPPPPPHSPPPPIYPYLSPPPPPHPVYSPPPPPVYSPPPPPSPPPC 457

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 37/53 (69%), Positives = 38/53 (71%), Gaps = 11/53 (20%)
 Frame = +1

Query: 409 PQPAPVFSPPP----PPPPPVYSPPPPPP----PVYSPPPPPP---SPPPPSP 534
           P P PV+ PPP    PPPPPVYSPPPPPP    PVYSPPPPPP   SPPPP P
Sbjct: 245 PSP-PVYLPPPVYSPPPPPPVYSPPPPPPSPPPPVYSPPPPPPPVYSPPPPPP 296

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 6/53 (11%)
 Frame = +1

Query: 400 LHAPQPAPVFSPPPPP-PPPVYSPPPPPP-PVYSPPPPPPSPPPPS----PPS 540
           +++P P PV+SPPPPP PPP   PPPPPP   YSPPPP PSPPPP+    PPS
Sbjct: 437 VYSPPPPPVYSPPPPPSPPPCIEPPPPPPCAEYSPPPPSPSPPPPTQYKPPPS 489

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 35/43 (81%), Positives = 35/43 (81%), Gaps = 2/43 (4%)
 Frame = +1

Query: 415 PAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPP--SPP 537
           P PV SPP   PPPVYSPPPPPP VYSPPPPPPSPPPP  SPP
Sbjct: 241 PMPVPSPPVYLPPPVYSPPPPPP-VYSPPPPPPSPPPPVYSPP 282

 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 35/53 (66%), Positives = 36/53 (67%), Gaps = 8/53 (15%)
 Frame = +1

Query: 409 PQPAPVFSPPPPP-------PPPVYSPPPPPPPVYSPPPPPPSPPPPSP-PSC 543
           P P PV+SPPPPP       PPPVYSPPPPP     P PPPPSPPPPSP P C
Sbjct: 309 PPPPPVYSPPPPPSPPPPSPPPPVYSPPPPP-----PSPPPPSPPPPSPLPPC 356

 Score = 73.6 bits (179), Expect = 9e-12
 Identities = 31/43 (72%), Positives = 33/43 (76%)
 Frame = +1

Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537
           P P P+FSPPPP P   YS PPPP P +SPPPPP SPPPPSPP
Sbjct: 369 PPPPPLFSPPPPTPY-YYSSPPPPSPPHSPPPPPHSPPPPSPP 410

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 36/59 (61%), Positives = 37/59 (62%), Gaps = 15/59 (25%)
 Frame = +1

Query: 403 HAPQPA--PVFSPPPPP-------PPPVYSPPPPP--PPVYSPPPPPP----SPPPPSP 534
           H+P P   P  SPPPPP       PPPVYSPPPPP  PP   PPPPPP    SPPPPSP
Sbjct: 418 HSPPPPIYPYLSPPPPPHPVYSPPPPPVYSPPPPPSPPPCIEPPPPPPCAEYSPPPPSP 476

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 34/58 (58%), Positives = 35/58 (60%), Gaps = 11/58 (18%)
 Frame = +1

Query: 403 HAPQPAPVFSPPP--------PPPPPVYSPPPPPPPVYSPPPPPPSPP---PPSPPSC 543
           H+P P P   PPP        PPP PVYS  PPPPPVYSPPPPP  PP   PP PP C
Sbjct: 411 HSPPPPPHSPPPPIYPYLSPPPPPHPVYS--PPPPPVYSPPPPPSPPPCIEPPPPPPC 466

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 31/45 (68%), Positives = 33/45 (73%), Gaps = 4/45 (8%)
 Frame = +1

Query: 415 PAPVFSPPPPPP-PPVYSPPPP---PPPVYSPPPPPPSPPPPSPP 537
           P PV+SPPPPPP PP  SPPPP   PP V  PPPPPP+ PPP PP
Sbjct: 329 PPPVYSPPPPPPSPPPPSPPPPSPLPPCVRPPPPPPPNSPPPPPP 373

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 30/47 (63%), Positives = 33/47 (70%), Gaps = 4/47 (8%)
 Frame = +1

Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPP----SPPPPSPP 537
           P P P    PPPPPPP  + PPPPPP++SPPPP P    SPPPPSPP
Sbjct: 350 PSPLPPCVRPPPPPPP--NSPPPPPPLFSPPPPTPYYYSSPPPPSPP 394

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 31/50 (62%), Positives = 34/50 (68%), Gaps = 7/50 (14%)
 Frame = +1

Query: 409 PQPAPVF--SPPPP-----PPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537
           P P P +  SPPPP     PPPP +SPPPP PP +SPPPPP SPPPP  P
Sbjct: 378 PPPTPYYYSSPPPPSPPHSPPPPPHSPPPPSPP-HSPPPPPHSPPPPIYP 426

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 30/52 (57%), Positives = 30/52 (57%), Gaps = 9/52 (17%)
 Frame = +1

Query: 409 PQPAPVFSPPPPPPPPVYSPPP----PPPPVYSPPPPPPSPPPP-----SPP 537
           P P P   PPPPPP   YSPPP    PPPP    PPP PSPPPP     SPP
Sbjct: 452 PSPPPCIEPPPPPPCAEYSPPPPSPSPPPPTQYKPPPSPSPPPPPVHYYSPP 503

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 31/52 (59%), Positives = 33/52 (63%), Gaps = 10/52 (19%)
 Frame = +1

Query: 409 PQPAPVFSPPPP----PPPPVYSPPP----PPPPV--YSPPPPPPSPPPPSP 534
           P P   +SPPPP    PPP  Y PPP    PPPPV  YSPPPP  SPPPP+P
Sbjct: 463 PPPCAEYSPPPPSPSPPPPTQYKPPPSPSPPPPPVHYYSPPPPSQSPPPPAP 514

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 29/46 (63%), Positives = 30/46 (65%), Gaps = 7/46 (15%)
 Frame = +1

Query: 421 PVFSPPPPPPPPVYSPPPP---PPPVYSPPPPP----PSPPPPSPP 537
           P    PPPP PP+  P PP   PPPVYSPPPPP    P PPPPSPP
Sbjct: 230 PTLPAPPPPSPPMPVPSPPVYLPPPVYSPPPPPPVYSPPPPPPSPP 275

[117][TOP]
>UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJW3_9ROSI
          Length = 268

 Score = 90.5 bits (223), Expect = 7e-17
 Identities = 51/80 (63%), Positives = 60/80 (75%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           +VRAEE AET Y SIDL SSIIQRKLRKIK+KE+DHGRHMKG NRLK  E   P+    E
Sbjct: 153 VVRAEEDAETIYASIDLASSIIQRKLRKIKDKESDHGRHMKGFNRLKVRE---PMHQVVE 209

Query: 244 EDEIEITPQKDDEEELIEEV 185
           +D  E++ Q+D  E+ IEEV
Sbjct: 210 DDADEVSQQED--EDYIEEV 227

[118][TOP]
>UniRef100_Q8ENI5 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis
           RepID=Q8ENI5_OCEIH
          Length = 185

 Score = 90.1 bits (222), Expect = 9e-17
 Identities = 50/144 (34%), Positives = 83/144 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + +  +L+R E      Y ++DLV   ++R++RK K K     R    P    F+E
Sbjct: 52  IEVTIPMTNLLLRGEVQHIDLYAAVDLVVDKLERQIRKHKTKINRKFRQNGSPKHA-FAE 110

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           +         E E  +   ++DE +L  E+VRTK F++ P+   EAI Q++M+ H+F+ F
Sbjct: 111 M---------EKEARLAEDEEDENQL--EIVRTKRFNLKPMDSEEAILQMDMLGHEFFVF 159

Query: 94  RNEETGEINIVYKRKEGGYGLIIP 23
            N+++GE N+VY+R++G YGLI P
Sbjct: 160 TNDDSGETNVVYRRRDGKYGLIEP 183

[119][TOP]
>UniRef100_C5VNV1 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum D
           str. 1873 RepID=C5VNV1_CLOBO
          Length = 178

 Score = 90.1 bits (222), Expect = 9e-17
 Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKF 281
           V V +    +++RAEE     Y +IDLV   ++R++RK K K  +  HG      + LKF
Sbjct: 50  VEVTIPFNGVILRAEEANNDMYAAIDLVLEKLERQIRKQKTKLEKRKHG------DALKF 103

Query: 280 SEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 101
             +   +P             KD E+ +  ++V+TK F + P++  EA+ Q+E++ H+F+
Sbjct: 104 QFIPEYIP-------------KDAEDNVESKIVKTKKFAVKPMSNEEAVLQMELLGHNFF 150

Query: 100 AFRNEETGEINIVYKRKEGGYGLIIPK 20
            FRN +T E+N++YKRK+G YGLI P+
Sbjct: 151 VFRNSDTDEVNVLYKRKDGQYGLIEPE 177

[120][TOP]
>UniRef100_C9RVC1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
           Tax=Geobacillus RepID=C9RVC1_9BACI
          Length = 182

 Score = 90.1 bits (222), Expect = 9e-17
 Identities = 54/142 (38%), Positives = 83/142 (58%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + +  +L+RAEE  E  Y +IDLV+  ++R++RK K K      + K  +R K ++
Sbjct: 53  IEVTIPIPHLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKEAK 107

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           +  P+  G    E        +EEE   E+VRTK+F + P+   EAI Q+ ++ H+F+ F
Sbjct: 108 LAAPVSIGASAAE--------NEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            N ET   NIVY+RK+G YGLI
Sbjct: 158 TNAETNRTNIVYRRKDGKYGLI 179

[121][TOP]
>UniRef100_C2U573 Ribosome-associated factor Y n=3 Tax=Bacillus cereus
           RepID=C2U573_BACCE
          Length = 180

 Score = 90.1 bits (222), Expect = 9e-17
 Identities = 60/145 (41%), Positives = 80/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +L+RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 50  VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP          E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[122][TOP]
>UniRef100_B7HEI9 Ribosomal subunit interface protein n=9 Tax=Bacillus cereus group
           RepID=B7HEI9_BACC4
          Length = 180

 Score = 90.1 bits (222), Expect = 9e-17
 Identities = 60/145 (41%), Positives = 80/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +L+RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 50  VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP          E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[123][TOP]
>UniRef100_C2QJQ3 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Bacillus cereus R309803 RepID=C2QJQ3_BACCE
          Length = 180

 Score = 90.1 bits (222), Expect = 9e-17
 Identities = 60/145 (41%), Positives = 80/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +L+RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 50  VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP          E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[124][TOP]
>UniRef100_B6G8G1 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM
           13279 RepID=B6G8G1_9ACTN
          Length = 194

 Score = 90.1 bits (222), Expect = 9e-17
 Identities = 52/145 (35%), Positives = 79/145 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V V     ++R  EH    Y +IDL +  + R+LRK K +  D+ +       L  +E
Sbjct: 56  VEVTVRARGSVIRVAEHGADMYAAIDLAADKVTRQLRKFKTRVVDNRQQ-----GLSAAE 110

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           V    P  D  D +   P+++D++     +VR K  ++ P+T  +A+ Q +++ HDFY F
Sbjct: 111 VAPVEPVADLADLL--IPEEEDDQ-----LVRVKEIELTPMTEEQALVQTDLLGHDFYVF 163

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N  TG IN+VY RK GGYG+I PK
Sbjct: 164 ENSTTGLINVVYHRKNGGYGIIKPK 188

[125][TOP]
>UniRef100_UPI00006DCB57 hypothetical protein CdifQ_04002839 n=1 Tax=Clostridium difficile
           QCD-32g58 RepID=UPI00006DCB57
          Length = 138

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 52/141 (36%), Positives = 84/141 (59%)
 Frame = -1

Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
           V ++ +   ++RAE+  +  Y +ID+V   + R++ K K K  D  ++ K    ++F  +
Sbjct: 3   VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENL 59

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
              + +  E D+ +     DDEE+    + R K F++ P++  EAI Q+E+V H+FY FR
Sbjct: 60  DF-IDNSSEFDDYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 114

Query: 91  NEETGEINIVYKRKEGGYGLI 29
           N++  EINIVYKRK GGYGLI
Sbjct: 115 NQDNFEINIVYKRKAGGYGLI 135

[126][TOP]
>UniRef100_A0Q2Y0 Ribosomal subunit interface protein n=1 Tax=Clostridium novyi NT
           RepID=A0Q2Y0_CLONN
          Length = 178

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 50/145 (34%), Positives = 84/145 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +++RAE+     Y +ID+V   ++R++RK K K     +  K  + LKF  
Sbjct: 50  VEVTIPFNGVILRAEDSNSDMYAAIDIVLEKLERQIRKQKTKL----QRRKHGDALKFQF 105

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           +   +P             KDDE+ +  ++V+TK F + P++  EA+ Q+E++ H+F+ F
Sbjct: 106 IPEYVP-------------KDDEDNIESKIVKTKRFAIKPMSREEAVLQMELLGHNFFVF 152

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N ET E+N++YKRK+G YGLI P+
Sbjct: 153 TNAETEEVNVLYKRKDGQYGLIEPE 177

[127][TOP]
>UniRef100_D0BMS6 Ribosomal subunit interface protein n=1 Tax=Granulicatella elegans
           ATCC 700633 RepID=D0BMS6_9LACT
          Length = 182

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 53/142 (37%), Positives = 82/142 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  +++RAEE +   YGSIDLV   ++R++RK K K     R  KG     F  
Sbjct: 54  VEVTIPLPYLVLRAEETSGDLYGSIDLVIDKLERQVRKYKTKINRKSRE-KG-----FDI 107

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            + P           + P+  DE+E + E+VRTK  D+ P+   EA+ Q+ M+ H+F+ +
Sbjct: 108 PVAP-----------VVPEPVDEDESVLEIVRTKRVDLKPMDSEEAVLQMNMLGHNFFIY 156

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
           ++ ET E +IVY+RK+G YGLI
Sbjct: 157 QDAETNETHIVYRRKDGKYGLI 178

[128][TOP]
>UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile
           RepID=C9XLM7_CLODI
          Length = 187

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 52/141 (36%), Positives = 84/141 (59%)
 Frame = -1

Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
           V ++ +   ++RAE+  +  Y +ID+V   + R++ K K K  D  ++ K    ++F  +
Sbjct: 52  VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENL 108

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
              + +  E D+ +     DDEE+    + R K F++ P++  EAI Q+E+V H+FY FR
Sbjct: 109 DF-IDNSSEFDDYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 163

Query: 91  NEETGEINIVYKRKEGGYGLI 29
           N++  EINIVYKRK GGYGLI
Sbjct: 164 NQDNFEINIVYKRKAGGYGLI 184

[129][TOP]
>UniRef100_C4FCG3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis
           DSM 13280 RepID=C4FCG3_9ACTN
          Length = 194

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 52/145 (35%), Positives = 78/145 (53%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V V     ++R  EH    Y +IDL +  + R+LRK K +  D+ +       L  +E
Sbjct: 56  VEVTVRARGSVIRVAEHGADMYAAIDLAAEKVTRQLRKFKTRVVDNRQQ-----GLSAAE 110

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           V    P  D  D +   P+ +D++     +VR K  ++ P+T  EA+ Q +++ HDFY F
Sbjct: 111 VAPVEPVADLADLL--LPEDEDDQ-----LVRVKEVELTPMTDEEALVQTDLIGHDFYVF 163

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N  TG +N+VY RK GGYG+I PK
Sbjct: 164 ENSVTGLVNVVYHRKNGGYGIIKPK 188

[130][TOP]
>UniRef100_C3AT15 Ribosome-associated factor Y n=3 Tax=Bacillus RepID=C3AT15_BACMY
          Length = 180

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 58/145 (40%), Positives = 80/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +L+RAEE     Y +IDLV   ++R++RK K K     R    P     + 
Sbjct: 50  VEVTIPFTDLLLRAEETHSDMYAAIDLVVDKVERQIRKHKTKVNRKLREKGSPK----TA 105

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            IL  P+   E+       K+DE EL    VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 106 FILTEPAATLEEV------KEDELEL----VRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[131][TOP]
>UniRef100_B7HX18 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
           RepID=B7HX18_BACC7
          Length = 180

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 59/145 (40%), Positives = 80/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +L+RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F  
Sbjct: 50  VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP          E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDQLELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[132][TOP]
>UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
           27758 RepID=C0BAM2_9FIRM
          Length = 189

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 57/145 (39%), Positives = 80/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+  ++R+E+ +   Y SIDLV  II+R+LRK K K        +G +  +  E
Sbjct: 61  IEVTIPVKGNIIRSEQESSDMYVSIDLVEEIIERQLRKYKTKLI---AKQQGGHDFR-QE 116

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            I    S  E DEIEI              VRTK F + P+   +A  Q+E++ H+FY F
Sbjct: 117 FIESDTSAAESDEIEI--------------VRTKRFGIKPMFPEDACIQMELLGHNFYVF 162

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N ET E+N+VYKRK G YGLI P+
Sbjct: 163 SNAETDEVNVVYKRKNGTYGLIEPE 187

[133][TOP]
>UniRef100_Q72XS8 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
           RepID=Q72XS8_BACC1
          Length = 180

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 59/145 (40%), Positives = 80/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +L+RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F  
Sbjct: 50  VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP          E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[134][TOP]
>UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
           ATCC 43255 RepID=UPI00017F5ACC
          Length = 185

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 53/141 (37%), Positives = 82/141 (58%)
 Frame = -1

Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
           V ++ +   ++RAE+  +  Y +ID+V   + R++ K K K  D  ++ K    ++F   
Sbjct: 52  VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFEN- 107

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
              L   D   E +    ++DE  +IE   R K F++ P++  EAI Q+E+V H+FY FR
Sbjct: 108 ---LDFIDNSSEFDDYDDEEDENIVIE---RRKKFNVKPMSSEEAILQMELVGHNFYMFR 161

Query: 91  NEETGEINIVYKRKEGGYGLI 29
           N++  EINIVYKRK GGYGLI
Sbjct: 162 NQDNFEINIVYKRKAGGYGLI 182

[135][TOP]
>UniRef100_B8GDB0 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Chloroflexus aggregans DSM 9485 RepID=B8GDB0_CHLAD
          Length = 197

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 46/137 (33%), Positives = 85/137 (62%), Gaps = 1/137 (0%)
 Frame = -1

Query: 427 ILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK-GPNRLKFSEVILPLPSG 251
           +++RAEE A   Y +ID V  ++QR++++ K+K     R ++   N L  +E +      
Sbjct: 65  VILRAEERAADLYAAIDAVQEVLQRQIQRYKDKYWRRSRELRRATNGLTPAEEVA---IA 121

Query: 250 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 71
           + E E    P    E E + +V+RTK F + P+ V +AI+Q+E++ H F+ F++ ET +I
Sbjct: 122 EAETEAMTAPV---ETEPVAKVIRTKTFRLRPMFVDDAIEQMELLGHTFFVFQDAETMQI 178

Query: 70  NIVYKRKEGGYGLIIPK 20
           +++Y+R++G YG+I+P+
Sbjct: 179 SVLYRRRDGNYGVIVPE 195

[136][TOP]
>UniRef100_C6Q3Y9 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Thermoanaerobacter mathranii subsp. mathranii str.
           A3 RepID=C6Q3Y9_9THEO
          Length = 181

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
 Frame = -1

Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVV--------VVVEVEKILVRAEEHAETTYG 386
           T  ++  VVK+V+ +      +  V ++  V        + +  + I+ RAEE ++  YG
Sbjct: 14  TDGLRDAVVKKVSKLSKYFTEDTEVRTVLSVQKNHHIAEITIPFKGIIFRAEEVSDDMYG 73

Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITP----Q 218
           SID V   I+R++ K K K           NR   +E I            EI P     
Sbjct: 74  SIDRVVDKIERQILKHKTKLK---------NRFGANESI----------RFEIPPVYQEA 114

Query: 217 KDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGY 38
           K++EEE   E+V+TK F + P++  EAI Q+ ++ H+F+ F N +T  IN+VYKRK+G Y
Sbjct: 115 KEEEEETSFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKY 174

Query: 37  GLIIP 23
           GLI P
Sbjct: 175 GLIEP 179

[137][TOP]
>UniRef100_C2EGB2 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
           salivarius ATCC 11741 RepID=C2EGB2_9LACO
          Length = 184

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 52/142 (36%), Positives = 82/142 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  +++RAEE +   Y SIDLV+  ++R++RK K K     R  KG    +F+ 
Sbjct: 54  VEVTIPLPYLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKNFEFA- 111

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                P  DE++E+E         +   E+VRTK   + P+   EA+ Q++M+ HDF+ +
Sbjct: 112 -----PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGHDFFIY 157

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            + E G INIVY+R++G YGLI
Sbjct: 158 EDAENGGINIVYRRRDGRYGLI 179

[138][TOP]
>UniRef100_A3DJE4 Sigma 54 modulation protein / SSU ribosomal protein S30P n=3
           Tax=Clostridium thermocellum RepID=A3DJE4_CLOTH
          Length = 177

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 68/185 (36%), Positives = 100/185 (54%), Gaps = 11/185 (5%)
 Frame = -1

Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVVV-----VVEV----EKILVRAEEHAETTY 389
           T A+K   VK+V  + +K     A  +I + V     +VEV    E  L+RAEE +   Y
Sbjct: 13  TEALKEAAVKKVGKL-DKYFRRDAEATITMSVQKNRHIVEVTIPFEGGLLRAEEDSPDMY 71

Query: 388 GSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQK 215
            SID V   ++R++R+ K K  +  H   ++  N +KF           ++DE+E  P+ 
Sbjct: 72  ASIDKVIDSLERQIRRNKTKLEKKVHDGSLRFEN-IKF-----------DDDEVEEEPKF 119

Query: 214 DDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYG 35
                   EVVRTK F + P+TV EAI Q+ ++ H F+ F N ET E N+VY+RK+G YG
Sbjct: 120 --------EVVRTKKFAIKPMTVEEAILQMNLLGHQFFMFSNAETNEANVVYRRKDGNYG 171

Query: 34  LIIPK 20
           LI P+
Sbjct: 172 LIEPE 176

[139][TOP]
>UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
           35704 RepID=B0NJJ3_EUBSP
          Length = 179

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 50/145 (34%), Positives = 82/145 (56%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+  ++R+E+ +   Y SIDLV  +I+R+LRK K K     RH +G    K   
Sbjct: 50  IEVTIPVKGGIIRSEQESSDMYVSIDLVEEVIERQLRKYKNKLI--ARHQEGSGNFK--- 104

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                     ++  +   + +D+ E+  ++VRTK F   P+   +A  Q+E++ HDF+ F
Sbjct: 105 ----------QEFFDSGERSEDDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFFVF 152

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N ET E+N+VY+RK G +GLI P+
Sbjct: 153 CNAETDEVNVVYRRKNGTFGLIEPE 177

[140][TOP]
>UniRef100_UPI0001789185 sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789185
          Length = 188

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 54/142 (38%), Positives = 82/142 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  +++RAE+ ++  Y SID V   ++R++RK K K     R +K    LK   
Sbjct: 52  VEVTIPLTGVVLRAEDRSDDMYASIDAVVDKLERQIRKHKTKLN---RKIKQEGGLK--- 105

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ++         +++    + DE+E   EVVRTK F M P+ V EAI Q+ MV H+F+ F
Sbjct: 106 TLIAENGAAATSQVDAEQVEYDEDEY--EVVRTKRFTMKPMDVEEAILQMNMVGHNFFVF 163

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            N +T E+N+VYKR +G YGLI
Sbjct: 164 SNIDTQEVNVVYKRDDGKYGLI 185

[141][TOP]
>UniRef100_Q9K6W6 Ribosomal protein S30AE family n=1 Tax=Bacillus halodurans
           RepID=Q9K6W6_BACHD
          Length = 187

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 52/145 (35%), Positives = 86/145 (59%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + + ++L+RAEE     Y +IDLV   ++R++RK K K     R  +G  +  F  
Sbjct: 52  IEVTIPMSRLLLRAEEKHSDMYAAIDLVIEKLERQIRKHKTKVNRKFRQ-EGSLKYMFKN 110

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            + P+    EE  +E      +E++L  +VVR K F++ P+   EAI Q++M+ H+F+ F
Sbjct: 111 DLEPMDGMREEILLE------EEDDL--QVVRKKRFNLKPMDTEEAILQMDMLGHNFFVF 162

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N  +G+ N+VY+RK+G YGLI P+
Sbjct: 163 SNAISGDTNVVYRRKDGKYGLIEPE 187

[142][TOP]
>UniRef100_B7GL70 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Anoxybacillus
           flavithermus WK1 RepID=B7GL70_ANOFW
          Length = 182

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 57/142 (40%), Positives = 79/142 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + + +I++RAEE  +  Y +IDLV   ++R++RK K K     R  K  N +  + 
Sbjct: 53  IEVTIPMPQIVLRAEERHDDMYAAIDLVVDKLERQIRKHKTKVNRKMRE-KEANGVTLTA 111

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            +   P   EE E         EEE   EVVRTK F + P+   EAI Q+ M+ H+FY F
Sbjct: 112 TV---PVATEEHE---------EEEF--EVVRTKRFSLKPMDSEEAILQMNMLGHNFYVF 157

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            N ET   N+VYKRK+G YGLI
Sbjct: 158 INAETNRTNVVYKRKDGKYGLI 179

[143][TOP]
>UniRef100_C2LVK8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus hominis
           SK119 RepID=C2LVK8_STAHO
          Length = 191

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 47/142 (33%), Positives = 81/142 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + ++ + +RAEE  +  Y  IDLV+S ++R++RK K +     R    P      E
Sbjct: 54  IEVTIPLKNVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKNRDNGEP------E 107

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
             +        +++E T +  +E E+  E++R+K F + P+   EA+ Q++++ HDFY F
Sbjct: 108 PFIAEQQTVVNEDVEATSESSNENEI--EIIRSKQFSLKPMDSEEAVLQMDLLGHDFYIF 165

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            + ET   +IVY+RK+G YGLI
Sbjct: 166 TDRETDGTSIVYRRKDGKYGLI 187

[144][TOP]
>UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
           QCD-23m63 RepID=UPI00017F60C6
          Length = 185

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 53/141 (37%), Positives = 81/141 (57%)
 Frame = -1

Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
           V ++ +   ++RAE+  +  Y +ID+V   + R++ K K K  D  ++ K    ++F  V
Sbjct: 52  VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENV 108

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
                S + +D        DDEE     + R K F++ P++  EAI Q+E+V H+FY FR
Sbjct: 109 DFIDNSSEFDDY-------DDEEYENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 161

Query: 91  NEETGEINIVYKRKEGGYGLI 29
           N++  EINIVYKRK GGYGLI
Sbjct: 162 NQDNFEINIVYKRKAGGYGLI 182

[145][TOP]
>UniRef100_C5D7S1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Geobacillus sp. WCH70 RepID=C5D7S1_GEOSW
          Length = 182

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 51/142 (35%), Positives = 83/142 (58%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + + ++L+RAEE  +  Y +IDLV+  ++R++RK K K            +L+  E
Sbjct: 53  IEVTIPMPQLLLRAEERHDDMYAAIDLVADKLERQIRKHKTKVN---------RKLRNKE 103

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
               L + +    +E    +++EEE   E+VRTK+F + P+   EAI Q+ ++ H+F+ F
Sbjct: 104 TKQVLVTQNNNPPVE----ENEEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            N ET   NIVY+RK+G YGLI
Sbjct: 158 TNAETNRTNIVYRRKDGKYGLI 179

[146][TOP]
>UniRef100_B2TK14 Ribosome-associated protein Y n=3 Tax=Clostridium botulinum
           RepID=B2TK14_CLOBB
          Length = 177

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 56/182 (30%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
 Frame = -1

Query: 541 TRAVKVVVVKEVAAV---VNKLVAEAAVESIP-----VVVVVEVEKILVRAEEHAETTYG 386
           T A++ +V K+++ +    N  +   A  S+      V V++    +++R EE  E  Y 
Sbjct: 13  TNALREMVEKKISKLGKYFNSDIEAKATLSVQRNRQIVEVMIPFNGVVLRGEEANEDMYR 72

Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206
           +IDLV+  ++R++RK K K +      K    LKF E++            +++P   DE
Sbjct: 73  AIDLVAEKLERQIRKQKTKLS-----RKKSGSLKFGEIV------------DLSPVAVDE 115

Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26
           EE   ++V+ K F + P+ + EAI Q+E+V H+F+ +++ ++ +IN++YKRK+G YGL+ 
Sbjct: 116 EEA--KLVKRKRFGVKPMDIDEAILQMELVGHNFFVYQDVDSNKINVIYKRKDGDYGLLD 173

Query: 25  PK 20
           P+
Sbjct: 174 PE 175

[147][TOP]
>UniRef100_C3GRH2 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1 RepID=C3GRH2_BACTU
          Length = 180

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 59/145 (40%), Positives = 79/145 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +L+RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F  
Sbjct: 50  VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP          E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[148][TOP]
>UniRef100_A9VQA3 Sigma 54 modulation protein/ribosomal protein S30EA n=2
           Tax=Bacillus cereus group RepID=A9VQA3_BACWK
          Length = 180

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 59/145 (40%), Positives = 78/145 (53%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V +    +L+RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 50  IEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP          E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[149][TOP]
>UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
           RepID=B0P2P9_9CLOT
          Length = 179

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 52/145 (35%), Positives = 83/145 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + ++  ++RAEE +E  Y SIDLV  +I+R++R+ K +  +           K+  
Sbjct: 53  IEVTIPMKGHIIRAEEGSEDMYVSIDLVVDVIERQIRRYKTRLMNQ----------KYDG 102

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                   ++ED++E     DDE  +I    R+K F + P+ V EA  Q+E++ HDF+ F
Sbjct: 103 TSFKQEFMEQEDDVE-----DDEIRII----RSKKFAIKPMDVEEACVQMELLGHDFFVF 153

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           RN +T E+N+VYKRK   YGLI P+
Sbjct: 154 RNADTFEVNVVYKRKGNTYGLIEPE 178

[150][TOP]
>UniRef100_A0RKX8 Sigma 54 modulation protein / SSU ribosomal protein S30P n=26
           Tax=Bacillus cereus group RepID=A0RKX8_BACAH
          Length = 180

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 59/145 (40%), Positives = 79/145 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +L+RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F  
Sbjct: 50  VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP          E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[151][TOP]
>UniRef100_Q4L4H7 Uncharacterized protein SH2139 n=1 Tax=Staphylococcus haemolyticus
           JCSC1435 RepID=Y2139_STAHJ
          Length = 192

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK-ETDHGRHMKGPNRLKFS 278
           + V + ++ + +RAEE  +  Y  IDLV+S ++R++RK K +    H  H  G      +
Sbjct: 54  IEVTIPLKNVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKHKTH--GEPEAFVA 111

Query: 277 EVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98
           EV    P  +  D++   P  D E E+I    R+K F + P+   EA+ Q+E++ HDFY 
Sbjct: 112 EVQEAPP--ENVDDVNAEPTNDSEIEII----RSKQFSLKPMDSEEAVLQMELLGHDFYI 165

Query: 97  FRNEETGEINIVYKRKEGGYGLI 29
           F + ET   +IVYKRK+G YGLI
Sbjct: 166 FTDRETDGTSIVYKRKDGKYGLI 188

[152][TOP]
>UniRef100_Q49VV1 Uncharacterized protein SSP1964 n=1 Tax=Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305
           RepID=Y1964_STAS1
          Length = 190

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 48/142 (33%), Positives = 86/142 (60%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + ++K+ +RAEE  +  Y  IDL+++ ++R++RK K +     R+ +G       E
Sbjct: 54  IEVTIPLKKVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRVNRRNRN-RGEQ-----E 107

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
               LP  +E++ +EI   +++ +  IE ++R K F + P+   EA+ Q++++ HDF+ F
Sbjct: 108 AFASLP--EEKEAVEIQNDENEADNEIE-IIRAKNFSLKPMDSEEAVLQMDLLGHDFFIF 164

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            + ET   +IVYKRK+G YGLI
Sbjct: 165 TDRETDGTSIVYKRKDGKYGLI 186

[153][TOP]
>UniRef100_Q5WDF7 Ribosomal protein S30EA n=1 Tax=Bacillus clausii KSM-K16
           RepID=Q5WDF7_BACSK
          Length = 184

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 52/145 (35%), Positives = 85/145 (58%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + + K+L+R EE     Y +ID+V   ++R++RK K K     R  +G  +  F  
Sbjct: 53  IEVTIPMPKLLLRGEEINADMYAAIDIVVEKLERQIRKYKTKVNRKFRQ-EGSLKYMFKN 111

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            + PL      DE+       +++EL  EVVRTK F++ P+   EAI Q++++ H+F+ F
Sbjct: 112 ELEPL-----RDEVA------EDDEL--EVVRTKRFNLKPMDAEEAILQMDLLGHNFFVF 158

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            + E+G  N+VY+RK+G YGLI P+
Sbjct: 159 SDAESGSTNVVYRRKDGKYGLIEPE 183

[154][TOP]
>UniRef100_B9MLV8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Anaerocellum thermophilum DSM 6725
           RepID=B9MLV8_ANATD
          Length = 181

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 51/154 (33%), Positives = 88/154 (57%), Gaps = 3/154 (1%)
 Frame = -1

Query: 472 AVESIPVVVVVEV--EKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 299
           +VE I  +V V +    +++RAEE +   Y +IDLV   ++R++RK K K     +  + 
Sbjct: 42  SVEKISHIVEVTIPFHGMILRAEERSNDMYSAIDLVVDTLERQIRKFKTKIAKRAKDAES 101

Query: 298 PNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLE 122
              + F              E+E  P+K+ +EE  E  + +TK F + P++V EAI Q+ 
Sbjct: 102 LRYMTF--------------ELE-EPEKEVQEENSEFRIAKTKRFPIKPMSVEEAILQMN 146

Query: 121 MVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
           ++ H+F+ F N++T ++N+VY+R +G YGLI P+
Sbjct: 147 LLGHNFFVFLNQDTDKVNVVYRRNDGAYGLIEPE 180

[155][TOP]
>UniRef100_C6QNN3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Geobacillus sp. Y4.1MC1 RepID=C6QNN3_9BACI
          Length = 183

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 52/142 (36%), Positives = 84/142 (59%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + + ++L+RAEE  +  Y +IDLV+  ++R++RK K K      + K  +R K  +
Sbjct: 53  IEVTIPMPQLLLRAEERHDDMYAAIDLVADKLERQIRKHKTKV-----NRKLRDRDKEVK 107

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            +  + +          P +D+EEE  E +VRTK+F + P+   EAI Q+ ++ H+F+ F
Sbjct: 108 QVATVQTN--------APAEDNEEEEFE-IVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 158

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            N ET   NIVY+RK+G YGLI
Sbjct: 159 TNAETNRTNIVYRRKDGKYGLI 180

[156][TOP]
>UniRef100_C2YZ14 Ribosome-associated factor Y n=1 Tax=Bacillus cereus AH1271
           RepID=C2YZ14_BACCE
          Length = 180

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 59/145 (40%), Positives = 79/145 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +L+RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F  
Sbjct: 50  VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP          E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[157][TOP]
>UniRef100_C2SSP0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus BDRD-ST196
           RepID=C2SSP0_BACCE
          Length = 180

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 59/145 (40%), Positives = 78/145 (53%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V +    +L+RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 50  IEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP          E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[158][TOP]
>UniRef100_C2Q3D0 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
           RepID=C2Q3D0_BACCE
          Length = 180

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 59/145 (40%), Positives = 78/145 (53%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V +    +L+RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 50  IEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP          E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[159][TOP]
>UniRef100_C0BYR7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
           15053 RepID=C0BYR7_9CLOT
          Length = 178

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 52/145 (35%), Positives = 82/145 (56%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+  ++R+E+ +   Y SIDLV  +I+R+LRK K K     RH +G N  +   
Sbjct: 50  IEVTIPVKGNIIRSEQVSSDMYVSIDLVEEVIERQLRKYKNKLV--ARHQEGGNFRQ--- 104

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                    E  E E   + DDE +    +VRTK F + P+   +A  Q++++ HDF+ F
Sbjct: 105 ---------EFFESEYATEDDDEVK----IVRTKRFGIKPMYPEDACIQMDLLGHDFFVF 151

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E+N+VY+RK G +GLI P+
Sbjct: 152 CNADTDEVNVVYRRKNGTFGLIEPE 176

[160][TOP]
>UniRef100_B9CNR8 Light-repressed protein n=1 Tax=Atopobium rimae ATCC 49626
           RepID=B9CNR8_9ACTN
          Length = 195

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 51/150 (34%), Positives = 78/150 (52%)
 Frame = -1

Query: 469 VESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 290
           +E   V V V V   +VR     +  YG+ID  +  + R+LRK K +  D   H +    
Sbjct: 52  LERKSVEVTVFVRNSVVRVVSSGDDMYGAIDEAAEKVTRQLRKYKTRIVDKHHHAQNTRG 111

Query: 289 LKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 110
              S+        +E   +  TP +D +++L+ E    KY D+ P+T  EA+ Q +++ H
Sbjct: 112 RALSQ--------EELANLIETPAEDLDDQLVRE----KYIDLLPMTEEEALVQTDLLGH 159

Query: 109 DFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
           DFY F N  TG  N++Y RK GGYG+I P+
Sbjct: 160 DFYVFVNSTTGLTNVIYHRKNGGYGIIKPR 189

[161][TOP]
>UniRef100_P28368 Uncharacterized protein yvyD n=1 Tax=Bacillus subtilis
           RepID=YVYD_BACSU
          Length = 189

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 53/144 (36%), Positives = 79/144 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  + +R+E H E  Y +IDL ++ ++R++RK K K     R    P  L    
Sbjct: 53  VEVTIPMTDLALRSEVHNEDMYNAIDLATNKLERQIRKHKTKVNRKFREQGSPKYL---- 108

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
               L +G   D  +I  Q D EEE   ++VR K F++ P+   EAI Q+ M+ H+F+ F
Sbjct: 109 ----LANGLGSDT-DIAVQDDIEEEESLDIVRQKRFNLKPMDSEEAILQMNMLGHNFFVF 163

Query: 94  RNEETGEINIVYKRKEGGYGLIIP 23
            N ET   N+VY+R +G YGLI P
Sbjct: 164 TNAETNLTNVVYRRNDGKYGLIEP 187

[162][TOP]
>UniRef100_C4V4X1 Ribosome-associated inhibitor A n=1 Tax=Selenomonas flueggei ATCC
           43531 RepID=C4V4X1_9FIRM
          Length = 181

 Score = 87.4 bits (215), Expect = 6e-16
 Identities = 51/133 (38%), Positives = 73/133 (54%)
 Frame = -1

Query: 427 ILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGD 248
           IL+R EEH+E  Y SIDLV   ++R++RK K K     R                   G 
Sbjct: 61  ILLRGEEHSEDMYSSIDLVIEKLERQIRKQKTKLARRFRQ-----------------GGF 103

Query: 247 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 68
           + + +E   Q   EE+ +  VV+TK F + P+ V EAI Q+ +++H F+ FRN E+ E+N
Sbjct: 104 KAEAVETFAQPIPEEDELYPVVKTKRFTLQPMDVQEAIMQMNLLNHHFFVFRNAESEEVN 163

Query: 67  IVYKRKEGGYGLI 29
           IVY R +G Y LI
Sbjct: 164 IVYGRHDGKYALI 176

[163][TOP]
>UniRef100_C2ZFA1 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
           RepID=C2ZFA1_BACCE
          Length = 180

 Score = 87.4 bits (215), Expect = 6e-16
 Identities = 58/145 (40%), Positives = 79/145 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V +    +L+RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F  
Sbjct: 50  IEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF-- 106

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            ILP          E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[164][TOP]
>UniRef100_B7DUH5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Alicyclobacillus acidocaldarius LAA1
           RepID=B7DUH5_9BACL
          Length = 180

 Score = 87.4 bits (215), Expect = 6e-16
 Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 10/184 (5%)
 Frame = -1

Query: 541 TRAVKVVVVKEVAAVVNKLVAEA--------AVESIP--VVVVVEVEKILVRAEEHAETT 392
           T A++  V K++A +      EA        AVE +   V + V V  ++ RAEE +   
Sbjct: 13  TAALQEYVDKKIARLTRYFDREADKQIYVTMAVEGLDHRVEMTVFVNGVIFRAEEKSPDM 72

Query: 391 YGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKD 212
           Y SIDL +  ++ ++ + KEK     R  +GP          P     + D +  T   D
Sbjct: 73  YASIDLATDKLEEQIHRYKEKLNRRFR-ARGPR---------PQLKAADRDAVAET---D 119

Query: 211 DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGL 32
           DE +    VVR K F + P+ V EA+ Q+E++ HDF+ F N ET E+N+VY+R+ G YGL
Sbjct: 120 DEIK----VVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRRRSGDYGL 175

Query: 31  IIPK 20
           I P+
Sbjct: 176 IEPQ 179

[165][TOP]
>UniRef100_UPI0001694CB6 ribosomal subunit interface protein n=1 Tax=Paenibacillus larvae
           subsp. larvae BRL-230010 RepID=UPI0001694CB6
          Length = 182

 Score = 87.0 bits (214), Expect = 8e-16
 Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
 Frame = -1

Query: 541 TRAVKVVVVKEVAAVVN----KLVAEAAV------ESIPVVVVVEVEKILVRAEEHAETT 392
           T A+K  V K+++ +       L +EA+V      +   V V + +   L+RAE   +  
Sbjct: 13  TEALKDYVDKKISKLDKYFEAPLASEASVTLSVIKDMHTVEVTIPISGALLRAEVKNDDM 72

Query: 391 YGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKD 212
           Y SIDLV   ++R++RK K K     R   G   L   E     PS              
Sbjct: 73  YASIDLVVDKLERQIRKYKTKMNRRIRQEGGKRDLFVME-----PSS--------VANTV 119

Query: 211 DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGL 32
           +EEE   E+VRTK F + P+ V EAI Q+ MV H+F+ F N +T ++N+VYKR++G YGL
Sbjct: 120 EEEEY--ELVRTKRFTLKPMDVEEAILQMNMVGHNFFVFANMDTDQVNVVYKREDGRYGL 177

Query: 31  IIP 23
           I P
Sbjct: 178 IEP 180

[166][TOP]
>UniRef100_A9W9Y4 Ribosomal subunit interface protein n=2 Tax=Chloroflexus
           RepID=A9W9Y4_CHLAA
          Length = 197

 Score = 87.0 bits (214), Expect = 8e-16
 Identities = 46/137 (33%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
 Frame = -1

Query: 427 ILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK-GPNRLKFSEVILPLPSG 251
           +++RAEE A   Y +ID V  ++QR++ + K+K     R  +  PN L  +E +      
Sbjct: 65  VILRAEERAPDLYAAIDEVQEVLQRQIARYKDKYWRRSREQRRAPNGLTPAEEVA---IA 121

Query: 250 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 71
           + E     TP +   E     V+RTK F + P+ V +AI+Q+E++ H+F+ F++ ET ++
Sbjct: 122 EAEAAALATPTEVGSEA---RVIRTKTFRLRPMFVDDAIEQMELLGHNFFVFQDAETMQV 178

Query: 70  NIVYKRKEGGYGLIIPK 20
           +++Y+R++G YG+IIP+
Sbjct: 179 SVLYRRRDGNYGVIIPE 195

[167][TOP]
>UniRef100_Q3DA79 Ribosomal subunit interface protein n=2 Tax=Streptococcus
           agalactiae RepID=Q3DA79_STRAG
          Length = 184

 Score = 87.0 bits (214), Expect = 8e-16
 Identities = 53/147 (36%), Positives = 83/147 (56%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + ++ I +RAE+ ++  YGSIDLV   I+R++RK K K     R      ++  S+
Sbjct: 54  VEVTILIDSITLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQ 108

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           V           E E  P   DEE + + +VRTK  ++ P+ V EA+ Q+E++ HDF+ +
Sbjct: 109 VFTT--------EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIY 157

Query: 94  RNEETGEINIVYKRKEGGYGLIIPKGN 14
            + E    N++YKR++G  GLI  KGN
Sbjct: 158 TDAEDNTTNVLYKREDGELGLIEAKGN 184

[168][TOP]
>UniRef100_Q3CZ63 Ribosomal subunit interface protein n=6 Tax=Streptococcus
           agalactiae RepID=Q3CZ63_STRAG
          Length = 184

 Score = 87.0 bits (214), Expect = 8e-16
 Identities = 53/147 (36%), Positives = 83/147 (56%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + ++ I +RAE+ ++  YGSIDLV   I+R++RK K K     R      ++  S+
Sbjct: 54  VEVTILIDSITLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQ 108

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           V           E E  P   DEE + + +VRTK  ++ P+ V EA+ Q+E++ HDF+ +
Sbjct: 109 VFTT--------EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIY 157

Query: 94  RNEETGEINIVYKRKEGGYGLIIPKGN 14
            + E    N++YKR++G  GLI  KGN
Sbjct: 158 TDAEDNTTNVLYKREDGELGLIEAKGN 184

[169][TOP]
>UniRef100_C8WT44 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446 RepID=C8WT44_ALIAC
          Length = 180

 Score = 87.0 bits (214), Expect = 8e-16
 Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 10/184 (5%)
 Frame = -1

Query: 541 TRAVKVVVVKEVAAVVNKLVAEA--------AVESIP--VVVVVEVEKILVRAEEHAETT 392
           T A++  V K++A +      EA        AVE +   V + V V  ++ RAEE +   
Sbjct: 13  TAALQDYVDKKIARLTRYFDREADKQIYVTMAVEGLDHRVEMTVFVNGVIFRAEEKSPDM 72

Query: 391 YGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKD 212
           Y SIDL +  ++ ++ + KEK     R  +GP          P     + D +  T   D
Sbjct: 73  YASIDLATDKLEEQIHRYKEKLNRRFR-ARGPR---------PQLKAADRDAVAET---D 119

Query: 211 DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGL 32
           DE +    VVR K F + P+ V EA+ Q+E++ HDF+ F N ET E+N+VY+R+ G YGL
Sbjct: 120 DEIK----VVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRRRSGDYGL 175

Query: 31  IIPK 20
           I P+
Sbjct: 176 IEPQ 179

[170][TOP]
>UniRef100_C6J2M0 Ribosomal subunit interface protein n=1 Tax=Paenibacillus sp. oral
           taxon 786 str. D14 RepID=C6J2M0_9BACL
          Length = 183

 Score = 87.0 bits (214), Expect = 8e-16
 Identities = 55/142 (38%), Positives = 78/142 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  +++RAE+ ++  Y SID V   ++R++RK K K     R     N L   +
Sbjct: 52  VEVTIPLTGVVLRAEDRSDDMYASIDAVVDKLERQIRKHKTKINRKLRQKGVKNSLFVED 111

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                 + DE            EEEL  EVVRTK F + P+ V EAI Q+ MV H+F+ F
Sbjct: 112 ATTGSVALDE-----------GEEEL--EVVRTKRFTLKPMDVEEAILQMNMVGHNFFVF 158

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            N +T E+N+VYKR +G YGLI
Sbjct: 159 SNIDTKEVNVVYKRNDGKYGLI 180

[171][TOP]
>UniRef100_C0FKQ0 Putative uncharacterized protein n=1 Tax=Clostridium sp. M62/1
           RepID=C0FKQ0_9CLOT
          Length = 175

 Score = 87.0 bits (214), Expect = 8e-16
 Identities = 59/145 (40%), Positives = 80/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+  ++RAEE +   Y SIDLV  II+R+L+K K K  D     K    + FSE
Sbjct: 50  IEVTIPVKGHIIRAEEQSTDMYVSIDLVEEIIERQLKKYKRKLID-----KKQAPVDFSE 104

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           + +      EE E        D+E  IE+V   K F M P+   EA  Q+E++ H FY F
Sbjct: 105 LFV-----QEESE-------PDDEIKIEKV---KKFAMKPMDPEEACVQMELLGHSFYVF 149

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N ET E+N+VYKRK   YGLI P+
Sbjct: 150 LNAETEEVNVVYKRKGHTYGLIEPE 174

[172][TOP]
>UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
           ATCC 43243 RepID=B7AN97_9BACE
          Length = 179

 Score = 87.0 bits (214), Expect = 8e-16
 Identities = 52/157 (33%), Positives = 83/157 (52%)
 Frame = -1

Query: 490 KLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 311
           K+      E   + V + V+  ++R+E+ +   Y SIDLV  +I+R+L+K K K  D   
Sbjct: 41  KVTLSVEKERQKIEVTIPVKGSIIRSEQVSNDMYVSIDLVEEVIERQLKKYKNKLID--- 97

Query: 310 HMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAID 131
             K  +   F++  +     D++ +++I              +RTK FD+ P+   EA  
Sbjct: 98  --KQQDAAAFAQEYIDKEYVDDDADVKI--------------IRTKRFDVKPMDPEEACV 141

Query: 130 QLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
           Q+E++ H FY F N ET +IN+VYKRK   YGLI P+
Sbjct: 142 QMELLGHSFYVFFNSETEQINVVYKRKGNTYGLIEPE 178

[173][TOP]
>UniRef100_B9I248 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I248_POPTR
          Length = 115

 Score = 87.0 bits (214), Expect = 8e-16
 Identities = 52/105 (49%), Positives = 63/105 (60%), Gaps = 14/105 (13%)
 Frame = -1

Query: 355 RKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE--EELI---- 194
           RKLRKIK+KE+DHGRHMKG N+LK  E   P+    E D   ++ +KDD+  +EL     
Sbjct: 8   RKLRKIKDKESDHGRHMKGFNKLKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHL 64

Query: 193 --------EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 83
                      V TKYFDMPPLTV EAI +L  VDH FY F + E
Sbjct: 65  VTIHSIISSNAVHTKYFDMPPLTVDEAIVRLGNVDHAFYGFGHAE 109

[174][TOP]
>UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens
           ATCC 27750 RepID=C4Z2Z4_EUBE2
          Length = 175

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 51/145 (35%), Positives = 81/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+  ++R+E+ +   Y SIDLV  +I+R+L+K K K  D     K  N   F++
Sbjct: 50  IEVTIPVKGNIIRSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVD-----KQQNAAAFAQ 104

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                         E   +  D++E+  +++RTK F + P+   EA  Q+E++ H+FY F
Sbjct: 105 --------------EFVEKDYDDDEV--KIIRTKRFGIKPMDPEEACVQMELLGHNFYVF 148

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N ET E+N+VYKRK   YGLI P+
Sbjct: 149 FNSETEEVNVVYKRKGNTYGLIEPE 173

[175][TOP]
>UniRef100_B8CYM6 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Halothermothrix orenii H 168 RepID=B8CYM6_HALOH
          Length = 184

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 49/144 (34%), Positives = 79/144 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V   +  +++R EE ++  Y SID V   ++R++ K K K     R  K   + ++ E
Sbjct: 51  VEVTAYLNGLILRGEEESQDMYASIDGVLEKLERQVHKYKTKINRKIRERKQEFKKEYKE 110

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                   +  +EI       +E+E    +VRTK F + P++V EA  Q++++ HDF+ F
Sbjct: 111 --------ERREEI----LNSEEDEFKPRIVRTKKFAIKPMSVEEAAMQMDLLGHDFFVF 158

Query: 94  RNEETGEINIVYKRKEGGYGLIIP 23
            N  T ++N+VYKRK+G YGLI P
Sbjct: 159 TNANTEQVNVVYKRKDGNYGLIEP 182

[176][TOP]
>UniRef100_C5RGA6 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Clostridium cellulovorans 743B RepID=C5RGA6_CLOCL
          Length = 180

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 49/145 (33%), Positives = 87/145 (60%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + ++ +++R EE  E+ Y SIDLV   ++ ++RK K K +      K  + L+F +
Sbjct: 50  IEVTIPLKNVILRGEEATESMYASIDLVIDKLEGQMRKNKTKLSKQ----KYADSLRFYD 105

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            +        + E+  T   + EEE   ++V+TK F + P+   EA+ Q+E++ H+F+ F
Sbjct: 106 AL-------SKGELAAT---EVEEE--SKIVKTKRFAIKPMNAEEAVLQMELLGHNFFVF 153

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            ++ET E+N+VYKRK+G +GLI P+
Sbjct: 154 MDDETSEVNVVYKRKDGNFGLIEPE 178

[177][TOP]
>UniRef100_C2WEE0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus Rock3-44
           RepID=C2WEE0_BACCE
          Length = 180

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 57/145 (39%), Positives = 80/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +L+RAEE     Y +IDLV   I+R++RK K K     R    P     + 
Sbjct: 50  VEVTIPFTDLLLRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLREKGSPK----TT 105

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            IL         E   T ++  E++L  E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 106 FILT--------ESAATLEEVKEDDL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E N+VY RK+G YGLI  K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180

[178][TOP]
>UniRef100_B1B8N8 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum C
           str. Eklund RepID=B1B8N8_CLOBO
          Length = 184

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 48/145 (33%), Positives = 84/145 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +++RAE+     Y +ID+V   ++R++RK K K     +  K  + LKF  
Sbjct: 56  VEVTIPFNGVILRAEDSNSDMYAAIDIVLEKLERQIRKQKTKL----QRRKHGDALKFQF 111

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           +   +P             KD+E+ +  ++V+TK F + P++  EA+ Q+E++ H+F+ F
Sbjct: 112 IPEYVP-------------KDNEDSIESKIVKTKRFAIKPMSKEEAVLQMELLGHNFFVF 158

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N +T E+N++YKRK+G YGLI P+
Sbjct: 159 TNGDTEEVNVLYKRKDGQYGLIEPE 183

[179][TOP]
>UniRef100_A8W0Z3 Maf protein n=1 Tax=Bacillus selenitireducens MLS10
           RepID=A8W0Z3_9BACI
          Length = 197

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 52/145 (35%), Positives = 82/145 (56%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V + + + K+L+RAEE     Y ++DLV   ++R++RK K K     R  +G + LK+  
Sbjct: 66  VEITIPMPKLLLRAEEKHADMYAAVDLVIEKLERQIRKHKTKVN---RKFRGEDSLKYMF 122

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                P  +EE     TP  D       E+VRTK FD+ P+   EAI Q++M+ H+F+ F
Sbjct: 123 KNELEPISEEE-----TPDDD------YEIVRTKRFDLKPMDAEEAILQMDMLGHNFFVF 171

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            +  +G  ++VY+R +G YGLI P+
Sbjct: 172 SDAVSGVTSVVYRRSDGKYGLIEPE 196

[180][TOP]
>UniRef100_Q898W3 SSU ribosomal protein S30P n=1 Tax=Clostridium tetani
           RepID=Q898W3_CLOTE
          Length = 176

 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 53/145 (36%), Positives = 84/145 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V +    +++R EE  E  Y SIDLV   ++R++RK K K     + M G + L+F  
Sbjct: 50  IEVTIPFNGVILRGEEANEDMYASIDLVIDKLERQIRKQKTKLQ---KRMHGDS-LRFQ- 104

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
             +P   GD          K  EE    ++V+TK F + P++  EA+ Q+E++ H+F+ F
Sbjct: 105 -FIPDYEGD----------KFKEES---KIVKTKRFAIKPMSSEEAVLQMELIGHNFFVF 150

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            + +TGE+N+VYKRK+G YGLI P+
Sbjct: 151 ESADTGEVNVVYKRKDGNYGLIEPE 175

[181][TOP]
>UniRef100_Q1WSW6 Ribosome-associated factor Y n=1 Tax=Lactobacillus salivarius
           UCC118 RepID=Q1WSW6_LACS1
          Length = 184

 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 51/142 (35%), Positives = 81/142 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  +++RAEE +   Y SIDLV+  ++R++RK K K     R  KG    +F+ 
Sbjct: 54  VEVTIPLPYLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKNFEFA- 111

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                P  DE++E+E         +   E+VRTK   + P+   EA+ Q++M+ HDF+ +
Sbjct: 112 -----PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGHDFFIY 157

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            + E G I IVY+R++G YGLI
Sbjct: 158 EDAENGGIYIVYRRRDGRYGLI 179

[182][TOP]
>UniRef100_C2C307 Ribosome-associated inhibitor protein Y n=1 Tax=Listeria grayi DSM
           20601 RepID=C2C307_LISGR
          Length = 189

 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
 Frame = -1

Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR- 290
           +S  V V + +  +++RAEE     Y S+DL++  ++R++RK K K     R  KG  + 
Sbjct: 50  KSAKVEVTIPLPNLVLRAEETNGDLYASVDLIADKLERQIRKHKTKVNRKFRD-KGSEKD 108

Query: 289 -LKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVD 113
              FSE+    PS + + + +I            E+VRTK F + P+   EA+ Q+ ++ 
Sbjct: 109 YFAFSEINDSTPSEETDSDYDI------------EIVRTKSFSLKPMDSEEAVLQMNLLG 156

Query: 112 HDFYAFRNEETGEINIVYKRKEGGYGLI 29
           H+F+ F + ET   NIVYKRK+G YGLI
Sbjct: 157 HNFFVFNDAETNGTNIVYKRKDGKYGLI 184

[183][TOP]
>UniRef100_C0CJV5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
           DSM 10507 RepID=C0CJV5_9FIRM
          Length = 175

 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 49/145 (33%), Positives = 82/145 (56%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+  ++R+E+ +   Y SIDLV  +I+R+LRK K K  D  +            
Sbjct: 50  IEVTIPVKGNIIRSEQVSNDMYVSIDLVEEVIERQLRKYKTKIVDKEK------------ 97

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                 +GD   +  I  + ++E+E+  ++ RTK FD+ P+   +A  Q+E++ H+F+ F
Sbjct: 98  ------AGDHFQKAFIEKEYEEEDEV--KIQRTKKFDIKPMYPEDACVQMELLGHNFFVF 149

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N ET ++N+VYKRK   YGLI P+
Sbjct: 150 CNAETDQVNVVYKRKGNTYGLIEPE 174

[184][TOP]
>UniRef100_B9EAE7 Ribosomal subunit interface protein homolog n=1 Tax=Macrococcus
           caseolyticus JCSC5402 RepID=B9EAE7_MACCJ
          Length = 186

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 52/144 (36%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + ++ + +RAEE     Y +++L+   ++R++RK K K           NR KF E
Sbjct: 54  VEVTIPLKDVTLRAEERHNDLYAAVNLIVEKLERQIRKHKTKV----------NR-KFRE 102

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEV--VRTKYFDMPPLTVFEAIDQLEMVDHDFY 101
                  G + D   + P  + EEE  +E+  +R+K F + P+   EA+ Q+ M+ HDF+
Sbjct: 103 ------KGVKNDIFPVLPGTEPEEEKGDEIEIIRSKQFALKPMDAEEAVLQMNMLGHDFF 156

Query: 100 AFRNEETGEINIVYKRKEGGYGLI 29
            F + ET E NIVYKRK+G YGLI
Sbjct: 157 IFNDRETNETNIVYKRKDGKYGLI 180

[185][TOP]
>UniRef100_A4XJ41 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Caldicellulosiruptor saccharolyticus DSM 8903
           RepID=A4XJ41_CALS8
          Length = 182

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 2/153 (1%)
 Frame = -1

Query: 472 AVESIPVVVVVEVE--KILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 299
           +VE I  +V V +    +++RAEE +   Y +IDLV   ++R++RK K K     +  + 
Sbjct: 43  SVEKIRHIVEVTIPFYGMILRAEEASNDMYSAIDLVVDSLERQIRKFKTKIAKRAKDAES 102

Query: 298 PNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 119
              + F E              E   + + EE    ++ +TK F + P++V EAI Q+ +
Sbjct: 103 LRYMTFEE--------------EAQQETNQEENGEFKIAKTKRFPIKPMSVDEAILQMNL 148

Query: 118 VDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
           + H F+ F N++T ++N+VYKR +G YGLI P+
Sbjct: 149 LGHSFFVFLNQDTDKVNVVYKRNDGAYGLIEPE 181

[186][TOP]
>UniRef100_C1P990 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Bacillus coagulans 36D1 RepID=C1P990_BACCO
          Length = 187

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 50/145 (34%), Positives = 88/145 (60%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V + + + ++++RAEE  E  Y +IDL++  ++R++RK K K     R  KG  R    E
Sbjct: 54  VEITIPMPQVVLRAEETNEDMYAAIDLIADKLERQIRKHKTKVNRKLRE-KGSTR----E 108

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           +     +G +E +     +K+++ EL  ++VRTK+F++ P+   EA+ Q+ ++ H+F+ +
Sbjct: 109 LFTTPDTGLKEKQA----RKEEDSEL--QIVRTKHFNLKPMDSEEAVLQMNLLGHNFFIY 162

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            + ET   NIVY+RK+G YGLI  K
Sbjct: 163 TDAETNHTNIVYRRKDGKYGLIETK 187

[187][TOP]
>UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
           29176 RepID=B5CNW3_9FIRM
          Length = 186

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK----ETDHGRHMKGPNRL 287
           + V + V+  ++R+E+ ++  Y SIDLV  +I+R+LRK K K       H          
Sbjct: 50  IEVTIPVKGNIIRSEQTSDNMYVSIDLVEEVIERQLRKYKNKLVARSQGHPTSYTSTGNS 109

Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107
              E         E+DEI+I              VRTK F + P+   +A  Q+E++ H 
Sbjct: 110 FRKEFFETEDDAAEDDEIQI--------------VRTKKFGIKPMFPEDACIQMELLGHS 155

Query: 106 FYAFRNEETGEINIVYKRKEGGYGLIIPK 20
           F+ F N ET E+N+VYKRK+G +GLI P+
Sbjct: 156 FFVFSNAETDEVNVVYKRKDGSFGLIEPE 184

[188][TOP]
>UniRef100_A4ECY7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
           ATCC 25986 RepID=A4ECY7_9ACTN
          Length = 194

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 22/192 (11%)
 Frame = -1

Query: 529 KVVVVKEVAAVVNKLVAEAA----VESIPVVVVVEVEK------------------ILVR 416
           K  V   + A V++ + EA     +E + V VV+  EK                   ++R
Sbjct: 9   KTTVTDALRAHVDEKIGEALKVFDIEPMTVDVVLRYEKNPSNPNPAIVEVTARARGSVIR 68

Query: 415 AEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDE 236
             EH    Y +IDL +  + R+LRK K K  D        NR   +      P    ED 
Sbjct: 69  VAEHGADMYAAIDLSADKVTRQLRKFKTKVVD--------NRQGGASAADVAPVERVEDL 120

Query: 235 IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYK 56
            ++   ++D++ L+ E    K  D+ P+T  +A+ Q +++ HDFY F N  TG IN+VY 
Sbjct: 121 ADLLLPEEDDDLLVRE----KVIDVTPMTEEQALVQTDLLGHDFYVFENATTGLINVVYH 176

Query: 55  RKEGGYGLIIPK 20
           RK GGYG+I P+
Sbjct: 177 RKNGGYGIIKPR 188

[189][TOP]
>UniRef100_C8WMZ8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Eggerthella lenta DSM 2243 RepID=C8WMZ8_9ACTN
          Length = 191

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 52/171 (30%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
 Frame = -1

Query: 535 AVKVVVVKEVAAVVNKLVAEAAVESIPVV--VVVEVEKILVRAEEHAETTYGSIDLVSSI 362
           ++KV+ +  + A +   V +      P V  V +  +  ++R EEH E  Y +ID+ ++ 
Sbjct: 27  SMKVMDIDPLVAEIVLFVEKNPANPRPAVCEVTLRTKGHIIRVEEHEEDMYAAIDVAAAK 86

Query: 361 IQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVV 182
           + R+LRK K K  D  R ++  +     E I   PS   E +++   Q+  ++E    VV
Sbjct: 87  VVRQLRKYKTKVVD--RKLRAAD-----ETIRIEPSAAGELDVDGLMQELSDDE----VV 135

Query: 181 RTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
           R K  +  PLT  EA+ +++++ HDF+A+ + ++G +N++Y+R +GGYGL+
Sbjct: 136 RVKTIEFEPLTEEEALVKIDLLGHDFFAYTDRDSGLVNVLYRRDDGGYGLL 186

[190][TOP]
>UniRef100_C6LIX7 Ribosomal subunit interface protein n=1 Tax=Bryantella
           formatexigens DSM 14469 RepID=C6LIX7_9FIRM
          Length = 176

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 53/146 (36%), Positives = 85/146 (58%), Gaps = 1/146 (0%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN-RLKFS 278
           + V + V+  ++R+E+ +   Y SIDLV  +I+R+LRK K K     +H +G N R +F 
Sbjct: 50  IEVTIPVKGNIIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKLI--AKHQEGSNFRREFI 107

Query: 277 EVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98
           E         +E+ +E        EE+   ++RTK+F + P+   +A  Q+E++ H+F+ 
Sbjct: 108 E---------KEETVE-------PEEV--NIIRTKHFGIKPMYPEDACIQMELLGHNFFV 149

Query: 97  FRNEETGEINIVYKRKEGGYGLIIPK 20
           F N ET E+N+VYKRK   YGLI P+
Sbjct: 150 FCNAETEEVNVVYKRKGNTYGLIEPE 175

[191][TOP]
>UniRef100_C8P6S3 Ribosomal subunit interface protein n=1 Tax=Lactobacillus antri DSM
           16041 RepID=C8P6S3_9LACO
          Length = 179

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 50/142 (35%), Positives = 80/142 (56%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  + +RAEE +   YGS+DLV+  ++R++RK K K     R  KG   L+F  
Sbjct: 54  VEVTIPLPYLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF-- 110

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
               +PS D+    E+            ++VRTK   + P+   EA+ Q++M+ HDF+ F
Sbjct: 111 ----VPSDDDAASDEL------------KIVRTKQVSLKPMDPEEAVLQMDMLGHDFFVF 154

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
           ++ ET   +IVY+R++G YGLI
Sbjct: 155 QDAETNGTSIVYRRRDGRYGLI 176

[192][TOP]
>UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
           13275 RepID=B6FVY1_9CLOT
          Length = 194

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 52/132 (39%), Positives = 77/132 (58%)
 Frame = -1

Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
           ++RAEE  E  Y +IDLV   ++ +L+K K+K     RH +  +        +   S + 
Sbjct: 69  VIRAEESQENLYPAIDLVVDKLKIQLKKYKDKMQK--RHQENKS--------IRFDSPEI 118

Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
            D I     +D E+EL   + R K  ++ P++  EA+ Q+E+V HDFY FRN+ET EI +
Sbjct: 119 NDSILEEDLEDFEDELFI-IKRRKRINIKPMSEEEAVLQMELVGHDFYIFRNDETDEIAL 177

Query: 64  VYKRKEGGYGLI 29
           VYKRK GGYG+I
Sbjct: 178 VYKRKNGGYGII 189

[193][TOP]
>UniRef100_A1HT12 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT12_9FIRM
          Length = 174

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 8/182 (4%)
 Frame = -1

Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVV--------VVVEVEKILVRAEEHAETTYG 386
           T A+K  V K V  +     A   +  I  V        V V V  +L+R EE     Y 
Sbjct: 13  TPALKDYVAKRVGKITKYFDALGEITVILTVEKGRHIVEVTVPVNGMLLRGEEATTDMYA 72

Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206
           SIDLV   +++++ K K K     R ++      F   ++    G+ ED           
Sbjct: 73  SIDLVIEKLEKQIEKYKTKIA---RKLRAGT---FKTDLVAGNGGESEDF---------- 116

Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26
                 VV+TK F + P+ V EAI Q+ +++HDFY F N ET ++N++Y+RK+G YGLI 
Sbjct: 117 -----RVVKTKRFPVKPMDVEEAIMQMNLINHDFYVFMNAETEQVNVIYRRKDGNYGLIE 171

Query: 25  PK 20
           P+
Sbjct: 172 PE 173

[194][TOP]
>UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8J8B2_CHLRE
          Length = 286

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 60/163 (36%), Positives = 83/163 (50%), Gaps = 19/163 (11%)
 Frame = -1

Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
           V +  +   +VR E+     Y +IDLV   I+ KL+KIKEK    G     P R    E 
Sbjct: 130 VTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQKIKEKAISRGAW---PGRAGPKED 186

Query: 271 ILPLPSGDEED------EIEITPQKDDEEELIEE------------VVRTKYFDMP-PLT 149
           +      DEED      E+++  Q  D+EE ++             V+R+K   +  P+T
Sbjct: 187 V------DEEDFQEYLKEVKMDTQLFDKEEQLQRQFAELNRIYPANVMRSKTVVLADPIT 240

Query: 148 VFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
           V EAID LE V H FY FR   T  + IVYKR+ GGYG+I+P+
Sbjct: 241 VEEAIDALEAVGHSFYVFREMTTDTVQIVYKRESGGYGVIVPQ 283

[195][TOP]
>UniRef100_Q3AFQ6 Ribosomal subunit interface protein n=1 Tax=Carboxydothermus
           hydrogenoformans Z-2901 RepID=Q3AFQ6_CARHZ
          Length = 177

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 51/143 (35%), Positives = 80/143 (55%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V + V   L+R EE +   Y SIDLV   ++R+ +K KEK     ++ K           
Sbjct: 52  VTIPVAGYLLRGEEESPDMYSSIDLVVDKLERQAKKYKEKLYARFKNNKN---------- 101

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
             + +G  E   E TP+ D+E +    +V++K F + P++  EA  Q+E++ H F+ F N
Sbjct: 102 --IATG--EKSAETTPEPDNEIK----IVKSKRFAIKPMSPEEAAMQMELLGHSFFVFTN 153

Query: 88  EETGEINIVYKRKEGGYGLIIPK 20
            +T EIN+VYKR++G YGLI P+
Sbjct: 154 ADTDEINVVYKRRDGKYGLIEPE 176

[196][TOP]
>UniRef100_A0ALJ5 YfiA protein n=2 Tax=Listeria RepID=A0ALJ5_LISW6
          Length = 187

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 51/142 (35%), Positives = 77/142 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  +++RAEE +   Y SIDL+   ++R++RK K K     R  KG  R  F+ 
Sbjct: 54  VEVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRD-KGAERDYFAY 112

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                      D    TP +++E +   E+VRTK F + P+   EA+ Q+ ++ H FY +
Sbjct: 113 ----------SDVNGSTPPEENESDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVY 162

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            + ET   NIVY RK+G YGLI
Sbjct: 163 TDAETNGTNIVYSRKDGKYGLI 184

[197][TOP]
>UniRef100_C6VLR5 Ribosomal protein S30EA n=3 Tax=Lactobacillus plantarum
           RepID=C6VLR5_LACPJ
          Length = 188

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 51/142 (35%), Positives = 79/142 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  +++RAEE +   Y S+DLV+  ++R++RK K K     R  KG   + F+ 
Sbjct: 54  VEVTIPLPYLVLRAEETSPDMYASVDLVTDKLERQIRKYKTKVNRKSRE-KGYKAIDFAA 112

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                      DE       D +++L  +VVRTK   + P+   EAI Q++M+ HDF+ +
Sbjct: 113 T----------DETVAAADNDQDDKL--DVVRTKRVALKPMDNEEAILQMDMLGHDFFIY 160

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            + ET  INIVY+R +G YGLI
Sbjct: 161 EDAETDAINIVYRRNDGRYGLI 182

[198][TOP]
>UniRef100_A8FHW6 Ribosome-associated inhibitor A n=2 Tax=Bacillus pumilus
           RepID=A8FHW6_BACP2
          Length = 187

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 50/144 (34%), Positives = 76/144 (52%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  + +RAE H E  Y ++DL +S ++R++RK K K     R       L    
Sbjct: 53  VEVTIPMTDLALRAEVHNEDMYNAVDLAASKLERQIRKHKTKVNRKFREQGAKKHL---- 108

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                  G+   ++ +   +DDEE    E+VR K F++ P+   EAI Q+ M+ H F+ F
Sbjct: 109 ----FAGGNGTADVAV---QDDEEIDETEIVRQKRFNLKPMDSEEAILQMNMLGHSFFVF 161

Query: 94  RNEETGEINIVYKRKEGGYGLIIP 23
            N ET   N+VY+R +G YGLI P
Sbjct: 162 TNAETNLTNVVYRRNDGKYGLIEP 185

[199][TOP]
>UniRef100_A8U6N5 Ribosomal subunit interface protein n=1 Tax=Carnobacterium sp. AT7
           RepID=A8U6N5_9LACT
          Length = 180

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 56/163 (34%), Positives = 92/163 (56%)
 Frame = -1

Query: 517 VKEVAAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKI 338
           V E  A VN  +   + ++  V V + +  +++RAEE +   YGS+DLVS  ++R++RK 
Sbjct: 35  VPEATAHVN--LKTYSDKTAKVEVTIPLPYLVLRAEETSPDLYGSVDLVSDKLERQMRKY 92

Query: 337 KEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMP 158
           K K     R  +G N      V+ P+  G+E        Q+  E+E+   +VRTK   + 
Sbjct: 93  KTKIN---RRTRGSN-----VVVPPVLPGEE--------QESHEDEV--NIVRTKRLSLK 134

Query: 157 PLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
           P+   EA+ Q++M+ H+F+ F + +T   +IVY+RK+G YGLI
Sbjct: 135 PMDSEEAVLQMDMLGHNFFIFEDADTNGTSIVYRRKDGKYGLI 177

[200][TOP]
>UniRef100_A5Z528 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
           ATCC 27560 RepID=A5Z528_9FIRM
          Length = 179

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 53/145 (36%), Positives = 83/145 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + V+  ++RAEE ++  Y SID+V   I+R+L K K K  D  + +K      F+E
Sbjct: 50  VEVTIPVKGRIIRAEEISDDMYVSIDMVEETIERQLVKYKNKIIDKKKSIKEA----FTE 105

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
             +     D EDE        DE+++  ++ +TK F + P+   EA  ++E++ H+F+ F
Sbjct: 106 TYI---EADYEDE--------DEDQI--KIKKTKRFGIKPMDPEEACVEMELLGHNFFVF 152

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N ET E+N+VYKRK   YGLI P+
Sbjct: 153 LNAETEEVNVVYKRKGNTYGLIEPE 177

[201][TOP]
>UniRef100_A9AY42 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Herpetosiphon aurantiacus ATCC 23779
           RepID=A9AY42_HERA2
          Length = 186

 Score = 84.3 bits (207), Expect = 5e-15
 Identities = 47/137 (34%), Positives = 78/137 (56%), Gaps = 1/137 (0%)
 Frame = -1

Query: 427 ILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-PLPSG 251
           I++RAEE     Y +++ V   +QR++R+ KEK      + +G  R    E+I  PLP+ 
Sbjct: 65  IILRAEERDRELYAAVEAVHDNLQRQIRRFKEKH-----YRRGKLRRTAGEIIAAPLPAL 119

Query: 250 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 71
            E          D E+    +++R K   + P+   EAI+Q+E++ H F+ FR+ ET +I
Sbjct: 120 PE----------DAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFVFRDAETEKI 169

Query: 70  NIVYKRKEGGYGLIIPK 20
            +VY+R +G YGLI+P+
Sbjct: 170 QVVYRRNDGNYGLIMPR 186

[202][TOP]
>UniRef100_C2HJY8 Ribosome-associated inhibitor A n=1 Tax=Finegoldia magna ATCC 53516
           RepID=C2HJY8_PEPMA
          Length = 179

 Score = 84.3 bits (207), Expect = 5e-15
 Identities = 52/164 (31%), Positives = 86/164 (52%)
 Frame = -1

Query: 514 KEVAAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIK 335
           ++   V  K   +A VE    V ++  + +++RAEE  E    +ID V   + R++RK K
Sbjct: 35  QQARVVFKKEKDKARVE----VTMILDKGVVLRAEESNEDIKTAIDKVEDALARQIRKHK 90

Query: 334 EKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPP 155
            K     +     N ++F                E   + +D+E  I  +V+TK F + P
Sbjct: 91  TKLQ---KRFTESNSIRF----------------EAVEENNDKEIPIGAIVKTKEFGIKP 131

Query: 154 LTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23
           +   EAI Q+E++DHDF+ F + +T  +N+VYKRK+G YGL++P
Sbjct: 132 MDKEEAIMQMELIDHDFFVFLDSKTNNVNVVYKRKDGNYGLLVP 175

[203][TOP]
>UniRef100_C2ETD9 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
           vaginalis ATCC 49540 RepID=C2ETD9_9LACO
          Length = 189

 Score = 84.3 bits (207), Expect = 5e-15
 Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  + +RAEE +   YGS+DLV+  ++R++RK K K     R  KG   L+F  
Sbjct: 63  VEVTIPLPYLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGFKSLEF-- 119

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98
                            P  DD E   + ++VRTK   + P+   EA+ Q++M+ HDF+ 
Sbjct: 120 ----------------VPTDDDAESQDDLKIVRTKQISLKPMDPEEAVLQMDMLGHDFFV 163

Query: 97  FRNEETGEINIVYKRKEGGYGLI 29
           F++ ET   +IVY+RK+G YGLI
Sbjct: 164 FQDAETDGTSIVYRRKDGRYGLI 186

[204][TOP]
>UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile
           QCD-23m63 RepID=UPI00017F5F53
          Length = 183

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 47/141 (33%), Positives = 83/141 (58%)
 Frame = -1

Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
           V +  V   ++RAE+  E  Y +ID+V   + ++L+K K++  D  +  K    ++F + 
Sbjct: 52  VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDA 108

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
            + L   DE+++       D+ +EL+  + R K F + P++  EA+ Q+E++ HDFY F+
Sbjct: 109 EINL--ADEQEDYG-----DENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159

Query: 91  NEETGEINIVYKRKEGGYGLI 29
           N ++ EI +VYKR  GGYG+I
Sbjct: 160 NIDSDEIAVVYKRNNGGYGII 180

[205][TOP]
>UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile
           RepID=C9XIR4_CLODI
          Length = 183

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 49/141 (34%), Positives = 83/141 (58%)
 Frame = -1

Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
           V +  V   ++RAE+  E  Y +ID+V   + ++L+K K++  D  +  K   R + SE+
Sbjct: 52  VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKSI-RFQDSEI 110

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
            L     DE+++       D+ +EL+  + R K F + P++  EA+ Q+E++ HDFY F+
Sbjct: 111 NL----ADEQEDYG-----DENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159

Query: 91  NEETGEINIVYKRKEGGYGLI 29
           N ++ EI +VYKR  GGYG+I
Sbjct: 160 NIDSDEIAVVYKRNNGGYGII 180

[206][TOP]
>UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630
           RepID=Q18CN1_CLOD6
          Length = 183

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 47/141 (33%), Positives = 83/141 (58%)
 Frame = -1

Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
           V +  V   ++RAE+  E  Y +ID+V   + ++L+K K++  D  +  K    ++F + 
Sbjct: 52  VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDA 108

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
            + L   DE+++       D+ +EL+  + R K F + P++  EA+ Q+E++ HDFY F+
Sbjct: 109 EINL--ADEQEDYG-----DENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159

Query: 91  NEETGEINIVYKRKEGGYGLI 29
           N ++ EI +VYKR  GGYG+I
Sbjct: 160 NIDSDEIAVVYKRNNGGYGII 180

[207][TOP]
>UniRef100_A5CYJ2 Ribosome-associated protein Y n=1 Tax=Pelotomaculum
           thermopropionicum SI RepID=A5CYJ2_PELTS
          Length = 175

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
 Frame = -1

Query: 541 TRAVKVVVVKEVAAVVNKL--VAEAAV------ESIPVVVVVEVEKILVRAEEHAETTYG 386
           T A+K  VVK V  +   +    +A V      ES  V V + V  +++R EE     Y 
Sbjct: 13  TDALKDYVVKRVGKLDKYIDNFGDAQVTLAVEKESHRVEVTIPVNGMILRGEESTGDMYT 72

Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206
           SIDLV   +++++ K K K    G                   + D +      P+++D 
Sbjct: 73  SIDLVVDKLEKQIEKYKGKLLKRGARF----------------TNDHKTAAPAVPEEEDG 116

Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26
             L    VRTK F + P+ V EAI Q+ ++ H F+ F N ET ++N+VY+RK+G YGLI 
Sbjct: 117 PRL----VRTKRFAIKPMPVEEAILQMNLLGHSFFVFSNAETEQVNVVYRRKDGNYGLIE 172

Query: 25  PK 20
           P+
Sbjct: 173 PE 174

[208][TOP]
>UniRef100_Q71WR7 Ribosomal subunit interface protein n=9 Tax=Listeria
           RepID=Q71WR7_LISMF
          Length = 187

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 51/142 (35%), Positives = 77/142 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  +++RAEE +   Y SIDL+   ++R++RK K K     R  KG  R  F+ 
Sbjct: 54  VEVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRD-KGAERDYFAY 112

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                      D    TP +++E +   E+VRTK F + P+   EA+ Q+ ++ H FY +
Sbjct: 113 ----------SDVNGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVY 162

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            + ET   NIVY RK+G YGLI
Sbjct: 163 TDAETNGTNIVYSRKDGKYGLI 184

[209][TOP]
>UniRef100_C1I442 30S ribosomal protein S30AE family n=1 Tax=Clostridium sp.
           7_2_43FAA RepID=C1I442_9CLOT
          Length = 178

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 8/181 (4%)
 Frame = -1

Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESI--------PVVVVVEVEKILVRAEEHAETTYG 386
           T A+K ++ K+++ V      E   ++          V + +    I++RAEE  E  Y 
Sbjct: 13  TPALKEMIEKKLSKVKRYFDPEVEAKTTLSVQKNKQKVEITIPFNGIILRAEESTEDMYK 72

Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206
           SIDLV + ++R++RK + K +      +    L+F ++          DE+ ++   D+ 
Sbjct: 73  SIDLVVAKLERQIRKQRTKLS-----RRNNESLRFPQL----------DEVALS---DEV 114

Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26
            E   EVV+ K F + P++V EA+ Q+E+V H+F+ +++ E  ++ +VYKRK+G YGL+ 
Sbjct: 115 VETNGEVVKVKRFGVKPMSVEEAVLQMELVGHNFFVYQDSEANKVCVVYKRKDGDYGLLE 174

Query: 25  P 23
           P
Sbjct: 175 P 175

[210][TOP]
>UniRef100_C0FTS3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans
           DSM 16841 RepID=C0FTS3_9FIRM
          Length = 176

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 50/145 (34%), Positives = 81/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + ++   +R+E+ +   Y SIDLV  +I+R+L+K + K     ++     +  F  
Sbjct: 50  VEVTIPMKGSYIRSEQVSSDMYVSIDLVEEVIERQLKKYRTKLVTKQQNAAAVFKQDFL- 108

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                   DE+ E        D+EE+  +++RTK FDM P+   +A  ++E++ HDFY F
Sbjct: 109 --------DEKSE--------DDEEI--KIIRTKKFDMKPMYPEDACVEMELLGHDFYVF 150

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N ET ++N+VYKRK   YGLI P+
Sbjct: 151 INAETEDVNVVYKRKGNTYGLIEPE 175

[211][TOP]
>UniRef100_A6CQE4 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. SG-1
           RepID=A6CQE4_9BACI
          Length = 189

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 51/142 (35%), Positives = 76/142 (53%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  +++RAEE  E  Y +IDL+   ++R++RK K K     R    P     ++
Sbjct: 54  VEVTIPMPHLVLRAEERHEDMYAAIDLIVDKLERQIRKHKTKVNRKMREKGSPKEFFAAQ 113

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
             L     +E         K  E E  +EVVRTK F++ P+   EAI Q+ ++ H F+ F
Sbjct: 114 EGLTTSQLNE---------KARETEENDEVVRTKQFNLKPMDSEEAILQMNLLGHSFFIF 164

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            + ET   NIVYKR++G YGLI
Sbjct: 165 TDAETNATNIVYKRRDGKYGLI 186

[212][TOP]
>UniRef100_Q9T0K5 Extensin-like protein n=1 Tax=Arabidopsis thaliana
           RepID=Q9T0K5_ARATH
          Length = 760

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 39/56 (69%), Positives = 40/56 (71%), Gaps = 13/56 (23%)
 Frame = +1

Query: 409 PQPAPVFSPPPPPPPP-----VYSPPPP-----PPPVYSPPPPPPSPPPP---SPP 537
           P P PV+SPPPPPPPP     VYSPPPP     PPPVYSPPPPPP PPPP   SPP
Sbjct: 458 PPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPP 513

 Score = 83.6 bits (205), Expect = 9e-15
 Identities = 36/47 (76%), Positives = 37/47 (78%), Gaps = 7/47 (14%)
 Frame = +1

Query: 415 PAPVFSPPPPPP--PPVYS-----PPPPPPPVYSPPPPPPSPPPPSP 534
           P PV+SPPPPPP  PPVYS     PPPPPPPVYSPPPPPP PPPP P
Sbjct: 432 PPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPP 478

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 39/57 (68%), Positives = 40/57 (70%), Gaps = 14/57 (24%)
 Frame = +1

Query: 409 PQPAPVFS--------PPPPPPPPVYS---PPPPPPPVYSPPPPPPSPPPP---SPP 537
           P PAP+FS        PPP PPPPVYS   PPPPPPPVYSPPPPPP PPPP   SPP
Sbjct: 411 PPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPP 467

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 36/51 (70%), Positives = 37/51 (72%), Gaps = 8/51 (15%)
 Frame = +1

Query: 409 PQPAPVFSPPPPPP----PPVYSPPPPPPPVYSPP----PPPPSPPPPSPP 537
           P P PV+SPPPPPP    PPVYSPPPPPPP   PP    PPPPSPPPP PP
Sbjct: 443 PPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPP 493

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 36/53 (67%), Positives = 37/53 (69%), Gaps = 9/53 (16%)
 Frame = +1

Query: 409 PQPAPVFSPPPP----PPPPVYSPPPPPP-----PVYSPPPPPPSPPPPSPPS 540
           P P PV+SPPPP    PPPPVYSPPPPPP     PVYSPPPPP    PP PPS
Sbjct: 474 PPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPS 526

 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 36/56 (64%), Positives = 37/56 (66%), Gaps = 13/56 (23%)
 Frame = +1

Query: 409 PQPAPVFSPPPPPP----PPVYSPPPPPPPVYSPPPPPPSP---------PPPSPP 537
           P P PV+SPPPPPP    PPVYS  PPPPPVYS PPPPPSP         PPP PP
Sbjct: 489 PPPPPVYSPPPPPPPPPPPPVYS--PPPPPVYSSPPPPPSPAPTPVYCTRPPPPPP 542

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 29/49 (59%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
 Frame = +1

Query: 400 LHAPQPAPVFSPPPPP----PPPVYSPPPPPPPVYSPPPPPPSPPPPSP 534
           +++P P PV+S PPPP    P PVY   PPPPP +SPPPP  SPPPP P
Sbjct: 509 VYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEP 557

 Score = 67.4 bits (163), Expect = 6e-10
 Identities = 35/60 (58%), Positives = 38/60 (63%), Gaps = 14/60 (23%)
 Frame = +1

Query: 400 LHAPQPAPVFSPPP----PPPPPVYSPPPPPP-----PVY---SPPPPPPSPPPP--SPP 537
           +++P P P   PPP    PPPPPVYS PPPPP     PVY    PPPPP SPPPP  SPP
Sbjct: 494 VYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPP 553

 Score = 67.4 bits (163), Expect = 6e-10
 Identities = 37/63 (58%), Positives = 39/63 (61%), Gaps = 19/63 (30%)
 Frame = +1

Query: 406 APQPAPVFSPPPPPP-------PPV--YSPPPPPPPV-YSPPPPPP----SPPPP----- 528
           +P P PV+SPPPPPP       PP   YSPPPPPP V YS PPPPP    SPPPP     
Sbjct: 600 SPPPTPVYSPPPPPPCIEPPPPPPCIEYSPPPPPPVVHYSSPPPPPVYYSSPPPPPVYYS 659

Query: 529 SPP 537
           SPP
Sbjct: 660 SPP 662

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 32/54 (59%), Positives = 33/54 (61%), Gaps = 13/54 (24%)
 Frame = +1

Query: 421 PVFSPPPP--PPPPVY---SPPPPPPPV--------YSPPPPPPSPPPPSPPSC 543
           P  SPPPP  PPPP+Y   SPPPPP PV        YSPPPPPP   PP PP C
Sbjct: 571 PPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCIEPPPPPPC 624

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 29/46 (63%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
 Frame = +1

Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPP----SPPPPSP 534
           P P   +SPPPPPP   YS PPPPP  YS PPPPP    SPPPP P
Sbjct: 621 PPPCIEYSPPPPPPVVHYSSPPPPPVYYSSPPPPPVYYSSPPPPPP 666

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 32/56 (57%), Positives = 34/56 (60%), Gaps = 12/56 (21%)
 Frame = +1

Query: 403 HAPQPA--PVFSPPPPPPP-------PVYSPPPPPPPVYSPPPPP---PSPPPPSP 534
           H+P P   P  SPPPPP P       PVYSPPPPPP +  PPPPP    SPPPP P
Sbjct: 579 HSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCIEPPPPPPCIEYSPPPPPP 634

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 34/62 (54%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
 Frame = +1

Query: 373 PNLYSHR*FLHAPQPAPVFS----PPPP--PPPPVYSPPPPPPPVYSPPPPP-PSPPPPS 531
           P +YS      +P P PV+     PPPP  PPPP +SPPPP P  YS PPPP  SPPP S
Sbjct: 515 PPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHS 574

Query: 532 PP 537
           PP
Sbjct: 575 PP 576

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 33/54 (61%), Positives = 33/54 (61%), Gaps = 11/54 (20%)
 Frame = +1

Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVY--SPPPPPP----SPPPP-----SPP 537
           P P PV     PPPPPVY   PPPPPVY  SPPPPPP    SPPPP     SPP
Sbjct: 630 PPPPPVVHYSSPPPPPVYYSSPPPPPVYYSSPPPPPPVHYSSPPPPEVHYHSPP 683

 Score = 63.9 bits (154), Expect = 7e-09
 Identities = 32/58 (55%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
 Frame = +1

Query: 406 APQPAPVFSPPPPPPPPVYSPPPPPPPVY--SPPP-------PPPSP----PPPSPPS 540
           +P P PV+   PPPPP  YS PPPPPPV+  SPPP       PPPSP     PP PPS
Sbjct: 640 SPPPPPVYYSSPPPPPVYYSSPPPPPPVHYSSPPPPEVHYHSPPPSPVHYSSPPPPPS 697

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 28/54 (51%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = +1

Query: 397 FLHAPQPAPVFSPPPPPPPPV-YSPPPPPPPVYSPPPPPP----SPPPPSPPSC 543
           +  +P P PV+   PPPPPPV YS PPPP   Y  PPP P    SPPPP    C
Sbjct: 647 YYSSPPPPPVYYSSPPPPPPVHYSSPPPPEVHYHSPPPSPVHYSSPPPPPSAPC 700

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 28/47 (59%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
 Frame = +1

Query: 409 PQPAPVFSPPPPPPPPVYSPPP----PPPPVYSPPPPPPSPPPPSPP 537
           P P P   P PPPP P++S PP    PPPP  SPPPP  SPPPP PP
Sbjct: 401 PLPPPSL-PSPPPPAPIFSTPPTLTSPPPP--SPPPPVYSPPPPPPP 444

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 30/58 (51%), Positives = 33/58 (56%), Gaps = 14/58 (24%)
 Frame = +1

Query: 403 HAPQPAPVF--SPPP---------PPPPPVYSPPPPPPPVYSPPPPP---PSPPPPSP 534
           H+P P+PV   SPPP         PPP PV    PPPP V+  PPPP    SPPPPSP
Sbjct: 680 HSPPPSPVHYSSPPPPPSAPCEESPPPAPVVHHSPPPPMVHHSPPPPVIHQSPPPPSP 737

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 33/66 (50%), Positives = 34/66 (51%), Gaps = 23/66 (34%)
 Frame = +1

Query: 409 PQPAPVFSPPPP-----PPPPVY--SPPPP--------PPPVYSPPPP------PPSPPP 525
           P P P  SPPPP     PP P Y  SPPPP        PPP +SPPPP      PP PP 
Sbjct: 537 PPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPT 596

Query: 526 P--SPP 537
           P  SPP
Sbjct: 597 PVSSPP 602

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 25/44 (56%), Positives = 30/44 (68%)
 Frame = +1

Query: 406 APQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537
           +P+P PV +P PPP  P    PPPP P++S PP   SPPPPSPP
Sbjct: 393 SPRP-PVVTPLPPPSLP---SPPPPAPIFSTPPTLTSPPPPSPP 432

[213][TOP]
>UniRef100_Q1GB46 Ribosomal protein S30EA n=2 Tax=Lactobacillus delbrueckii
           RepID=Q1GB46_LACDA
          Length = 185

 Score = 83.6 bits (205), Expect = 9e-15
 Identities = 49/145 (33%), Positives = 82/145 (56%)
 Frame = -1

Query: 463 SIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK 284
           S  V V + +  +++RAEE  +  Y SID VS  ++R++RK K +     R  KG     
Sbjct: 51  SAKVEVTIPLPYLVLRAEETTDDMYRSIDFVSEKLERQIRKYKTRVNRKSRE-KG----- 104

Query: 283 FSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 104
             E  +P  +  EE+++E  P        + ++VR K  ++ P+   EAI Q++M++HDF
Sbjct: 105 VEEFFIPEDAPVEEEKVEKAP--------MFKIVRNKRVNLKPMDPEEAILQMDMLEHDF 156

Query: 103 YAFRNEETGEINIVYKRKEGGYGLI 29
           + F++ ET   ++VY+R +G YGLI
Sbjct: 157 FVFQDAETNGTSVVYRRNDGSYGLI 181

[214][TOP]
>UniRef100_B7A6F1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thermus
           aquaticus Y51MC23 RepID=B7A6F1_THEAQ
          Length = 186

 Score = 83.6 bits (205), Expect = 9e-15
 Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
 Frame = -1

Query: 508 VAAVVNKLVAEAAVES-IPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 332
           +A VV  L     VE      V +++   L+R EE  +  Y +ID +   ++ +L++ KE
Sbjct: 37  MAKVVLSLAGSPHVEKRAKAEVQLDLPGGLLRVEEEDQDLYAAIDRMVDRLEIQLKRYKE 96

Query: 331 KETDHGRHM-KGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPP 155
           +     RH  +GP          P P   + + +     +  EEE    +VR K F+M P
Sbjct: 97  RRFVGRRHTYQGP----------PPPEVRDMEAL-----RKPEEEEGPRIVRVKRFEMKP 141

Query: 154 LTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23
           +   EA+ Q+E + HDF+ FRN +T EIN+VY+RK+G YGLI P
Sbjct: 142 MDPEEAVFQMEALGHDFFVFRNAKTDEINVVYRRKDGNYGLIEP 185

[215][TOP]
>UniRef100_A3IC40 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. B14905
           RepID=A3IC40_9BACI
          Length = 183

 Score = 83.6 bits (205), Expect = 9e-15
 Identities = 50/142 (35%), Positives = 76/142 (53%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + ++ + +RAEE     Y ++DL+   ++R++RK K K     R  +G   L F+ 
Sbjct: 54  VEVTIPMKNLTLRAEERHNDMYAAVDLIVDKLERQIRKHKTKVNRKFREREGAG-LYFAT 112

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
               + +  +E+E  I              VRTK FD+ P+   EA+ Q+ M+ HDFY F
Sbjct: 113 TQAVVDTTLDEEEYSI--------------VRTKQFDLKPMDQEEAVLQMNMLGHDFYVF 158

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            + E+   NIVYKRK+G YGLI
Sbjct: 159 TDAESNGTNIVYKRKDGKYGLI 180

[216][TOP]
>UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale
           ATCC 33656 RepID=C4ZI34_EUBR3
          Length = 175

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 51/145 (35%), Positives = 80/145 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V +  +  ++R+E+ +   Y SIDLV  +I+R+LRK + K +            K++ 
Sbjct: 50  IEVTIPAKGHVIRSEQVSNDMYVSIDLVEEVIERQLRKYRTKISAK----------KYAP 99

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            I       ++D +E     DD E+   ++VRTK F M P+   +A  Q+E+  HDF+ F
Sbjct: 100 AIF------QDDFVEA----DDAEDEEIKIVRTKRFGMKPMYPEDACIQMELSGHDFFVF 149

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           RN E  E+N+VYKRK   YGLI P+
Sbjct: 150 RNAENDEVNVVYKRKGHTYGLIEPE 174

[217][TOP]
>UniRef100_B5YI17 SSU ribosomal protein S30P n=1 Tax=Thermodesulfovibrio yellowstonii
           DSM 11347 RepID=B5YI17_THEYD
          Length = 173

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 43/142 (30%), Positives = 81/142 (57%)
 Frame = -1

Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
           V+++V+  L++AE   E  Y ++D V   +++++ K KEK                    
Sbjct: 52  VLLKVDGHLIQAEGKTEDLYSAVDQVVEKLEKQVLKYKEK-------------------- 91

Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
             + + ++++ I+      +E E  + +V+ K FD+ P++  EA+DQLE++D DF+ F N
Sbjct: 92  --VQNKNKKETIKYPSALSEEVETAKRIVKYKKFDLRPMSPEEAVDQLELLDKDFFIFIN 149

Query: 88  EETGEINIVYKRKEGGYGLIIP 23
             +G++N++YKRK+G +GLI P
Sbjct: 150 SFSGDVNVIYKRKDGNFGLIEP 171

[218][TOP]
>UniRef100_B5YF17 Ribosomal subunit interface protein n=1 Tax=Dictyoglomus
           thermophilum H-6-12 RepID=B5YF17_DICT6
          Length = 179

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 52/143 (36%), Positives = 78/143 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V ++    +++A E  +    SIDLV   ++ +L+++KEK  D GR            
Sbjct: 55  VEVTIKANGRIIKASEANQDFRTSIDLVVDKLETQLKRLKEKLVDKGRRA---------- 104

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                     E   EI  +K+ EE+   +VV+ K F + P+ V EAI Q+E++ HDF+ F
Sbjct: 105 ----------ESIREILAEKEVEEK--PQVVKVKRFLLKPMDVEEAILQMELLGHDFFIF 152

Query: 94  RNEETGEINIVYKRKEGGYGLII 26
           R+ ET  I +VYKRK+G YGLII
Sbjct: 153 RDAETDRIGVVYKRKDGKYGLII 175

[219][TOP]
>UniRef100_A6TLE5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLE5_ALKMQ
          Length = 177

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 52/145 (35%), Positives = 78/145 (53%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + + +  +  ++RAEE  E  Y SID V + +  +LRK K K           N+ K  E
Sbjct: 50  IEITIPFDGSILRAEEKTEDMYASIDGVVNKLTSQLRKHKTKME---------NKTKKYE 100

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            I         + I    +  D +E   ++V+TK F M P+   EA+ Q+E++ H+FY F
Sbjct: 101 TI-------RFENIPTYVEDVDSDE--SKIVKTKRFAMKPMHSEEAVLQMELIGHNFYMF 151

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N ET E+N+VYKRK+G YGLI P+
Sbjct: 152 ANAETDEVNVVYKRKDGNYGLIEPE 176

[220][TOP]
>UniRef100_C9L411 Ribosomal subunit interface protein n=1 Tax=Blautia hansenii DSM
           20583 RepID=C9L411_RUMHA
          Length = 176

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 52/145 (35%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+  ++R+E+ +   Y SIDLV  II+R+LRK K K  D  +            
Sbjct: 50  IEVTIPVKGNIIRSEQVSSDMYVSIDLVEEIIERQLRKYKNKIIDKKQS----------- 98

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98
                 +G + + +E    KD EE+  E +++RTK F   P+   +A  Q+E++ H+F+ 
Sbjct: 99  ------AGFQPEFVE----KDYEEDTNEIKIIRTKKFGFKPMYPEDACVQMELLGHNFFV 148

Query: 97  FRNEETGEINIVYKRKEGGYGLIIP 23
           F N ET E+N+VYKRK   YGLI P
Sbjct: 149 FLNAETEEVNVVYKRKGNTYGLIEP 173

[221][TOP]
>UniRef100_C5QQC2 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus
           epidermidis M23864:W1 RepID=C5QQC2_STAEP
          Length = 191

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 47/158 (29%), Positives = 89/158 (56%)
 Frame = -1

Query: 502 AVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 323
           AV +  V   +  +  + V + ++ + +RAEE  +  Y  IDL+++ ++R++RK K +  
Sbjct: 38  AVAHVKVKTYSNSATKIEVTIPLKDVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRVN 97

Query: 322 DHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 143
              R  +G   +  +EV    P     +E+    + D++ ++  E++R+K F + P+   
Sbjct: 98  RKHRD-RGDQEVFVAEVQEATP-----EEVSGAEEPDNDSDI--EIIRSKQFSLKPMDSE 149

Query: 142 EAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
           EA+ Q+ ++ HDF+ F + ET   +IVY+RK+G YGLI
Sbjct: 150 EAVLQMNLLGHDFFIFTDRETDGTSIVYRRKDGKYGLI 187

[222][TOP]
>UniRef100_C2ECJ0 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
           ruminis ATCC 25644 RepID=C2ECJ0_9LACO
          Length = 186

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 51/142 (35%), Positives = 81/142 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  +++RAEE +   Y SIDLV+  ++R++RK K K     R  KG    +F  
Sbjct: 54  VEVTIPLPYLVLRAEETSPDMYASIDLVTDKLERQIRKHKTKLNRKSRE-KGFKTFEF-- 110

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
               +P+ D        P++   E+   E+VRTK   + P+   EAI Q++M+ HDF+ +
Sbjct: 111 ----VPTAD--------PKEAAAEDKKFEIVRTKSVSLKPMDAEEAILQMDMLGHDFFIY 158

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            + ET  I+IVY+R++G YGLI
Sbjct: 159 EDAETSGIDIVYRRRDGRYGLI 180

[223][TOP]
>UniRef100_A5VIF9 Sigma 54 modulation protein / SSU ribosomal protein S30P n=6
           Tax=Lactobacillus reuteri RepID=A5VIF9_LACRD
          Length = 182

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 52/142 (36%), Positives = 82/142 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  + +RAEE +   YGSIDLV+  ++R++RK K K     R  KG   L+F  
Sbjct: 54  VEVTIPLPYLTLRAEETSNDMYGSIDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF-- 110

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
               +PS ++      T  +DDE +    +VRTK   + P+   EA+ Q++M+ H+F+ F
Sbjct: 111 ----IPSDNDG-----TDGQDDELK----IVRTKQVSLKPMDPEEAVLQMDMLGHNFFIF 157

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
           ++ ET   +IVY+R +G YGLI
Sbjct: 158 QDAETNGTSIVYRRNDGRYGLI 179

[224][TOP]
>UniRef100_B2GAI6 Ribosomal subunit interface protein n=3 Tax=Lactobacillus fermentum
           RepID=B2GAI6_LACF3
          Length = 181

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 48/142 (33%), Positives = 78/142 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  + +RAEE +   YGS+DLV+  ++R++RK K K     R  KG   L+F +
Sbjct: 54  VEVTIPLPYLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGYKNLEFVD 112

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                           TP ++ E     ++VRTK   + P+   EA+ Q++M+ HDF+ +
Sbjct: 113 ----------------TPSEEVEASDSLKIVRTKQIPLKPMDSEEAVLQMDMLGHDFFVY 156

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
           ++ ET   +IVY+R +G YGLI
Sbjct: 157 QDAETNGTSIVYRRNDGRYGLI 178

[225][TOP]
>UniRef100_C0WUJ7 Ribosome-associated inhibitor protein Y n=3 Tax=Lactobacillus
           RepID=C0WUJ7_LACBU
          Length = 194

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 50/142 (35%), Positives = 80/142 (56%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  + +RAEE +   Y S+DLV+  ++R++RK K K     R  KG   L+F  
Sbjct: 61  VEVTIPLPFLTLRAEELSNDLYASVDLVTDKLERQIRKYKTKVNRKSRE-KGFKNLEF-- 117

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
               +P+ D+      T    D+ +   +VVRTK   + P+   EAI Q++M+ HDF+ +
Sbjct: 118 ----VPNDDQ------TTSDSDDNQSQFDVVRTKRLALKPMDNEEAILQMDMLGHDFFIY 167

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            + +T  I+IVY+R +G YGLI
Sbjct: 168 EDADTSNIDIVYRRNDGRYGLI 189

[226][TOP]
>UniRef100_C0WCZ2 Sigma-54 modulation protein n=1 Tax=Acidaminococcus sp. D21
           RepID=C0WCZ2_9FIRM
          Length = 180

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 8/182 (4%)
 Frame = -1

Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIP--------VVVVVEVEKILVRAEEHAETTYG 386
           T A+K  V K+V  +  +      + ++         V + V    I++RA+E +E  Y 
Sbjct: 13  TPALKDYVEKKVETITKQFKTVGEITAVMRIERNKHIVEITVPASGIVLRAQEGSENMYA 72

Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206
           SID     I+R++ K K       R MK      F +  +P  SGD E+        D E
Sbjct: 73  SIDNCVEKIERQIHKYKT------RLMKRKYN-NFRDAAVPPVSGDVEEA-----SADGE 120

Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26
            +    V RTK + M P+ V EAI Q+ M++HDF+ F N+ET  + +VY+RK G YGLI 
Sbjct: 121 FK----VARTKTYAMRPMNVQEAIMQMNMLNHDFFVFFNDETESMAVVYRRKAGDYGLIN 176

Query: 25  PK 20
           P+
Sbjct: 177 PE 178

[227][TOP]
>UniRef100_B6G1P8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
           13275 RepID=B6G1P8_9CLOT
          Length = 190

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 51/141 (36%), Positives = 80/141 (56%)
 Frame = -1

Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
           V++  V    +R EE  +  Y +IDLV   + R++ K K+K       + G   +++   
Sbjct: 60  VMIPNVNGHTIRVEEEQDNLYPAIDLVCDKLSRQIIKYKDK---FKTRVPGNFSIRYE-- 114

Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
                 G EE   E+  + ++ E +IE   R K F++ P+++ EAI Q+ + DHDFY F+
Sbjct: 115 ------GIEELAQELDYEVEEPEVVIE---RRKKFNLKPMSIEEAILQMNLTDHDFYMFK 165

Query: 91  NEETGEINIVYKRKEGGYGLI 29
           + E+ EI +VYKRKEGGYGLI
Sbjct: 166 DRESFEICLVYKRKEGGYGLI 186

[228][TOP]
>UniRef100_B6FRG1 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM
           1787 RepID=B6FRG1_9CLOT
          Length = 178

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 52/145 (35%), Positives = 78/145 (53%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+  ++R+E+ ++  Y SIDLV  +I+R+LRK K K     R  +G N    SE
Sbjct: 50  IEVTIPVKGHIIRSEQVSDDMYVSIDLVEEVIERQLRKYKNKLI--ARQQEGGNFQ--SE 105

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                      DEI+I              +RTK F + P+   +A  Q+E++ H+F+ F
Sbjct: 106 FFEAEQDTSNNDEIKI--------------IRTKRFGIKPMFPEDACVQMELLGHNFFVF 151

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N ET E+N+VYKRK   YGLI P+
Sbjct: 152 SNAETDEVNVVYKRKNNTYGLIEPE 176

[229][TOP]
>UniRef100_A7B7M8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
           29149 RepID=A7B7M8_RUMGN
          Length = 185

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 48/147 (32%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+  ++R+E+ ++  Y S+DLV  +I+R+LRK K             N+L    
Sbjct: 50  IEVTIPVKGNIIRSEQTSDDMYVSVDLVEEVIERQLRKYK-------------NKLVARS 96

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEV--VRTKYFDMPPLTVFEAIDQLEMVDHDFY 101
              P  SG   +  +   + +D+  + +E+  VRTK F + P+   +A  Q++++ H F+
Sbjct: 97  QGHPTASGSGNNFKKEFFESEDDTSVDDEIRIVRTKRFGIKPMYPEDACIQMDLLGHAFF 156

Query: 100 AFRNEETGEINIVYKRKEGGYGLIIPK 20
            F N ET E+N+VYKRK+G +GLI P+
Sbjct: 157 VFCNAETDEVNVVYKRKDGSFGLIEPE 183

[230][TOP]
>UniRef100_A4L2S0 Ribosome-associated protein Y n=1 Tax=Lactobacillus reuteri
           RepID=A4L2S0_LACRE
          Length = 182

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 52/142 (36%), Positives = 82/142 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  + +RAEE +   YGSIDLV+  ++R++RK K K     R  KG   L+F  
Sbjct: 54  VEVTIPLPYLTLRAEETSNDMYGSIDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF-- 110

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
               +PS ++      T  +DDE +    +VRTK   + P+   EA+ Q++M+ H+F+ F
Sbjct: 111 ----IPSDNDG-----TDGQDDELK----IVRTKQVSLKPMDPEEAVLQMDMLGHNFFIF 157

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
           ++ ET   +IVY+R +G YGLI
Sbjct: 158 QDAETNGTSIVYRRNDGRYGLI 179

[231][TOP]
>UniRef100_B9RZI2 Protein binding protein, putative n=1 Tax=Ricinus communis
           RepID=B9RZI2_RICCO
          Length = 829

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 5/52 (9%)
 Frame = +1

Query: 400 LHAPQPAPVFSPPPP-PPPPVYSPPPP----PPPVYSPPPPPPSPPPPSPPS 540
           +H+P P PV+SPPPP PPPPV+SPPPP    PPPV+SPPPP  SPPPPSPPS
Sbjct: 679 VHSPPP-PVYSPPPPSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPSPPS 729

 Score = 77.8 bits (190), Expect = 5e-13
 Identities = 35/46 (76%), Positives = 36/46 (78%), Gaps = 5/46 (10%)
 Frame = +1

Query: 415 PAPVFSPPPP---PPPPVYSPPPP--PPPVYSPPPPPPSPPPPSPP 537
           P P  SPPPP   PPPPVYSPPPP  PPPV+SPPPP  SPPPPSPP
Sbjct: 650 PPPTQSPPPPVNSPPPPVYSPPPPSPPPPVHSPPPPVYSPPPPSPP 695

 Score = 77.0 bits (188), Expect = 8e-13
 Identities = 37/56 (66%), Positives = 42/56 (75%), Gaps = 10/56 (17%)
 Frame = +1

Query: 400 LHAPQPAPVFSPPPPP----PPPVYSPPPP----PPPVYSPPPPPPSPPPP--SPP 537
           +H+P P PV+SPPPPP    PPPV+SPPPP    PPP+YSPPPP  SPPPP  SPP
Sbjct: 734 MHSPPP-PVYSPPPPPVRSPPPPVHSPPPPVHSPPPPIYSPPPPRFSPPPPRFSPP 788

 Score = 74.3 bits (181), Expect = 5e-12
 Identities = 37/57 (64%), Positives = 41/57 (71%), Gaps = 11/57 (19%)
 Frame = +1

Query: 400 LHAPQPAPVFSPPPP---PPPPVYSPPPP-----PPPVYSPPPPPPSPPPP---SPP 537
           +H+P P PV SPPPP   PPPPVYSPPPP     PPP++SPPPP  SPPPP   SPP
Sbjct: 698 VHSPPP-PVHSPPPPVHSPPPPVYSPPPPSPPSPPPPMHSPPPPVYSPPPPPVRSPP 753

 Score = 73.6 bits (179), Expect = 9e-12
 Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 9/67 (13%)
 Frame = +1

Query: 364 SRTPNLYSHR*FLHAPQPAPVFSPPPP---PPPPVYSPPPP----PPPVYSPPPPPPSPP 522
           S  P ++S    +++P P PV SPPPP   PPPPV+SPPPP    PPP +SPPPP  SPP
Sbjct: 729 SPPPPMHSPPPPVYSPPPPPVRSPPPPVHSPPPPVHSPPPPIYSPPPPRFSPPPPRFSPP 788

Query: 523 PP--SPP 537
           PP  SPP
Sbjct: 789 PPTSSPP 795

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 39/69 (56%), Positives = 46/69 (66%), Gaps = 11/69 (15%)
 Frame = +1

Query: 364 SRTPNLYSHR*FLHAPQPAPVFSPPPP----PPPPVYSPPPP-----PPPVYSPPPPPPS 516
           S  P ++S    +H+P P PV+SPPPP    PPPP++SPPPP     PPPV SPPPP  S
Sbjct: 700 SPPPPVHSPPPPVHSPPP-PVYSPPPPSPPSPPPPMHSPPPPVYSPPPPPVRSPPPPVHS 758

Query: 517 PPPP--SPP 537
           PPPP  SPP
Sbjct: 759 PPPPVHSPP 767

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 31/50 (62%), Positives = 31/50 (62%), Gaps = 7/50 (14%)
 Frame = +1

Query: 409 PQPAPVFSPPPP---PPPPVYSPPPP----PPPVYSPPPPPPSPPPPSPP 537
           P   P  SP PP   PPPP  SPPPP    PPPVYSPPPP P PP  SPP
Sbjct: 634 PPTTPEQSPSPPGQSPPPPTQSPPPPVNSPPPPVYSPPPPSPPPPVHSPP 683

 Score = 60.8 bits (146), Expect = 6e-08
 Identities = 30/51 (58%), Positives = 31/51 (60%), Gaps = 10/51 (19%)
 Frame = +1

Query: 415 PAPVFSPPPP------PPPPVYSPPPP----PPPVYSPPPPPPSPPPPSPP 537
           P+P    PPP      P PP  SPPPP    PPPV SPPPP  SPPPPSPP
Sbjct: 626 PSPPGQSPPPTTPEQSPSPPGQSPPPPTQSPPPPVNSPPPPVYSPPPPSPP 676

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 20/78 (25%)
 Frame = +1

Query: 364 SRTPNLYSHR*FLHAPQPAPVFSPPPP---PPPPVYSPPPP-----PPPVYSPPPP---- 507
           S  P ++S    +H+P P P++SPPPP   PPPP +SPPPP     P P  + PPP    
Sbjct: 751 SPPPPVHSPPPPVHSPPP-PIYSPPPPRFSPPPPRFSPPPPTSSPPPTPTVAAPPPEDFI 809

Query: 508 -PP-------SPPPPSPP 537
            PP       SPPPP  P
Sbjct: 810 LPPNIGFQYSSPPPPMFP 827

[232][TOP]
>UniRef100_Q9RVE7 Protein DR_1082 n=1 Tax=Deinococcus radiodurans RepID=UA82_DEIRA
          Length = 191

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 51/142 (35%), Positives = 80/142 (56%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + V   ++RAEEH    Y +ID  S +++R+LRK K       R+MK   R +   
Sbjct: 56  VEVQLNVPGGIIRAEEHHADMYAAIDKASDVLERQLRKFKT------RYMK--QRQEGRP 107

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
             LP P+  E +        DD  E   E+VR K F++ P++  +A+ Q+E + HDFY F
Sbjct: 108 EPLPGPAEAEVNAQGSGAAMDDVSEFHPEIVRQKRFELRPMSAEDAVVQMEALGHDFYVF 167

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
           ++ + G+  +VY+R++G YGLI
Sbjct: 168 QDLQ-GQTGVVYRRRDGHYGLI 188

[233][TOP]
>UniRef100_UPI0001B5A5D6 ribosomal subunit interface protein n=1 Tax=Staphylococcus aureus
           subsp. aureus str. CF-Marseille RepID=UPI0001B5A5D6
          Length = 163

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 47/158 (29%), Positives = 87/158 (55%)
 Frame = -1

Query: 502 AVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 323
           AV +  V   +  +  + V + ++ + +RAEE  +  Y  IDL+++ ++R++RK K +  
Sbjct: 11  AVAHVKVKTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRIN 70

Query: 322 DHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 143
              R  +G   +  +E+        E  E ++     D+ E+  E++R+K F + P+   
Sbjct: 71  RKSRD-RGDQEVFVAEL-------QEMQETQVDNDAYDDNEI--EIIRSKEFSLKPMDSE 120

Query: 142 EAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
           EA+ Q+ ++ HDF+ F + ET   +IVY+RK+G YGLI
Sbjct: 121 EAVLQMNLLGHDFFVFTDRETDGTSIVYRRKDGKYGLI 158

[234][TOP]
>UniRef100_UPI0001794B34 hypothetical protein CLOSPO_00786 n=1 Tax=Clostridium sporogenes
           ATCC 15579 RepID=UPI0001794B34
          Length = 175

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 44/145 (30%), Positives = 76/145 (52%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V +    +++R EE  E  Y SID+V   ++R++RK K K                  
Sbjct: 50  IEVTIPFHGVILRGEETTEDMYASIDMVIDKLERQIRKQKTK------------------ 91

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
             L     D     +  P  +  E    ++V+TK F M P++  EA+ Q+E++ H+F+ +
Sbjct: 92  --LQRNIHDGSLRFQYIPDYESGENKETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVY 149

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           +N +T E+N++Y+RK+G YGLI P+
Sbjct: 150 QNADTEEVNVIYRRKDGNYGLIEPE 174

[235][TOP]
>UniRef100_B1HN67 Hypothetical yvyD protein n=1 Tax=Lysinibacillus sphaericus C3-41
           RepID=B1HN67_LYSSC
          Length = 183

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 50/142 (35%), Positives = 75/142 (52%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + ++ + +RAEE     Y ++DL+   ++R++RK K K     R  +G   L F+ 
Sbjct: 54  VEVTIPMKNLTLRAEERHNDMYAAVDLIVDKLERQIRKHKTKVNRKFREREGAG-LYFAT 112

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                 +  +E+E  I              VRTK FD+ P+   EA+ Q+ M+ HDFY F
Sbjct: 113 TQAVADTTLDEEEYSI--------------VRTKQFDLKPMDQEEAVLQMNMLGHDFYVF 158

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            + E+   NIVYKRK+G YGLI
Sbjct: 159 TDAESNGTNIVYKRKDGKYGLI 180

[236][TOP]
>UniRef100_Q62PU3 YvyD n=2 Tax=Bacillus licheniformis ATCC 14580 RepID=Q62PU3_BACLD
          Length = 187

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 53/144 (36%), Positives = 80/144 (55%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V + +  + +RAE H E  Y +IDL ++ ++R++RK K K     R  KG ++  F+E
Sbjct: 54  VEVTIPMTDLSLRAEVHHEDMYNAIDLATNKLERQIRKHKTKVNRKFRE-KGSSKHVFAE 112

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                      + I    Q+D E+E   +VVR K F++ P+   EAI Q+ M+ H F+ F
Sbjct: 113 ----------GNGIGTAVQEDIEDEQ-PQVVRQKRFNLKPMDNEEAILQMNMLGHSFFVF 161

Query: 94  RNEETGEINIVYKRKEGGYGLIIP 23
            N ET   N+VY+R +G YGLI P
Sbjct: 162 TNAETNLTNVVYRRNDGKYGLIEP 185

[237][TOP]
>UniRef100_C6JE61 Putative uncharacterized protein n=1 Tax=Ruminococcus sp.
           5_1_39BFAA RepID=C6JE61_9FIRM
          Length = 175

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 49/145 (33%), Positives = 78/145 (53%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + V+  ++R+E+ +   Y SIDLV  +I+R+LRK K K  D     K      F +
Sbjct: 50  IEVTIPVKGNIIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVD-----KQQAAANFQK 104

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
             L                KD +E+   +++RTK F + P+   +A  Q+E++ H+F+ F
Sbjct: 105 AYL---------------DKDYDEDEEVKIIRTKKFGIKPMYPEDACVQMELLGHNFFVF 149

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
            N ET ++N+VYKRK   YGLI P+
Sbjct: 150 YNAETEQVNVVYKRKGNTYGLIEPE 174

[238][TOP]
>UniRef100_C0GF81 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF81_9FIRM
          Length = 177

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIK---EKETDHGRHMKGPNRLK 284
           V V   +E +++RAEE     Y SID V   ++R++ K K    ++   G  +K  N L 
Sbjct: 50  VEVTAAIEGMILRAEESTGDMYASIDSVVDKLERQIAKYKTRINRKARQGGGIKAMNEL- 108

Query: 283 FSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 104
                               PQ +DEEE   +VV+TK F + P+ V EAI Q+ ++ HDF
Sbjct: 109 --------------------PQVEDEEE-DWDVVKTKRFVVKPMPVEEAILQMNLLGHDF 147

Query: 103 YAFRNEETGEINIVYKRKEGGYGLIIP 23
           + F N +  ++N++Y+RK+G YGLI P
Sbjct: 148 FVFMNADNEDVNVIYRRKDGKYGLIEP 174

[239][TOP]
>UniRef100_A7FQJ2 Ribosomal subunit interface protein n=7 Tax=Clostridium botulinum
           RepID=A7FQJ2_CLOB1
          Length = 175

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 44/145 (30%), Positives = 76/145 (52%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V +    +++R EE  E  Y SID+V   ++ ++RK K K                  
Sbjct: 50  IEVTIPFHGVILRGEETTEDMYASIDMVIDKLEGQVRKQKTK------------------ 91

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
             L     D     +  P  + EE    ++V+TK F M P++  EA+ Q+E++ H+F+ +
Sbjct: 92  --LQRKIHDGSLRFQYIPDYESEENKETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVY 149

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           +N +T E+N++Y+RK+G YGLI P+
Sbjct: 150 QNADTEEVNVIYRRKDGNYGLIEPE 174

[240][TOP]
>UniRef100_A8SVF0 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
           27759 RepID=A8SVF0_9FIRM
          Length = 175

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 49/145 (33%), Positives = 83/145 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + V + ++  ++RAE+ ++  Y SIDLV  +I+R++ K ++K  D  +++   N     E
Sbjct: 50  IEVTIPMKGHIIRAEQVSDDMYVSIDLVVEVIERQVTKHRKKLIDKEQNVAYLNEAFVDE 109

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
            I      +++D+I+I              VRTK F + P+   +A  Q++++ H+FY F
Sbjct: 110 DI------EDDDDIKI--------------VRTKKFAVKPMYPEDACIQMDLLGHNFYVF 149

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           RN ET E+N+VYKRK   YGLI P+
Sbjct: 150 RNAETDEVNVVYKRKGNTYGLIEPE 174

[241][TOP]
>UniRef100_Q2YSH7 Uncharacterized protein SAB0704 n=35 Tax=Staphylococcus aureus
           RepID=Y704_STAAB
          Length = 190

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 47/158 (29%), Positives = 87/158 (55%)
 Frame = -1

Query: 502 AVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 323
           AV +  V   +  +  + V + ++ + +RAEE  +  Y  IDL+++ ++R++RK K +  
Sbjct: 38  AVAHVKVKTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRIN 97

Query: 322 DHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 143
              R  +G   +  +E+        E  E ++     D+ E+  E++R+K F + P+   
Sbjct: 98  RKSRD-RGDQEVFVAEL-------QEMQETQVDNDAYDDNEI--EIIRSKEFSLKPMDSE 147

Query: 142 EAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
           EA+ Q+ ++ HDF+ F + ET   +IVY+RK+G YGLI
Sbjct: 148 EAVLQMNLLGHDFFVFTDRETDGTSIVYRRKDGKYGLI 185

[242][TOP]
>UniRef100_P13983 Extensin n=1 Tax=Nicotiana tabacum RepID=EXTN_TOBAC
          Length = 620

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
 Frame = +1

Query: 349 TFSE*SRTPNLYSHR*FLHAPQPAPVFSPPPP---PPPPVYSPPPPPPPVYSPPPPPPSP 519
           T+++    P  YS     ++P P P +SPPPP   PPPP Y+ PPPPPP YSPPPP  SP
Sbjct: 422 TYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSP 481

Query: 520 PPPSP 534
           PPPSP
Sbjct: 482 PPPSP 486

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 36/63 (57%), Positives = 37/63 (58%), Gaps = 19/63 (30%)
 Frame = +1

Query: 406 APQPAPVFSPPPP------------PPPPVYSPPPPP-----PPVYSPPPPPPSPPPP-- 528
           A  P P +SPPPP            PPPPVYSPPPPP     PP Y PPPPP SPPPP  
Sbjct: 323 AYSPPPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSF 382

Query: 529 SPP 537
           SPP
Sbjct: 383 SPP 385

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 36/68 (52%), Positives = 36/68 (52%), Gaps = 25/68 (36%)
 Frame = +1

Query: 409 PQPAPVFSPPPPP--PPPVYSPPPP-------------PPPVYSPPPPP----------P 513
           P P P FSPPPP   PPP YSPPPP             PPPVYSPPPPP          P
Sbjct: 311 PTPTPTFSPPPPAYSPPPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLP 370

Query: 514 SPPPPSPP 537
            PPP SPP
Sbjct: 371 PPPPSSPP 378

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 50/112 (44%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
 Frame = +1

Query: 235 FHPPHPPRVVAI*PH*ISTYWVPSCGDHDQSLFP*SFS----TFSE*SRTPNLYSHR*FL 402
           + PP PP      P    TY  P       S  P SFS    T+ +    P  YS     
Sbjct: 353 YSPPPPPSYSPPPP----TYLPPP---PPSSPPPPSFSPPPPTYEQSPPPPPAYS----- 400

Query: 403 HAPQPAP-VFSPPPP---PPPPVYSPPPPPPPVYSPPPPPPSPPPP---SPP 537
             P PAP  +SPPPP   PPPP Y+ PPP PP YSPPPP  SPPPP   SPP
Sbjct: 401 -PPLPAPPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPP 451

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 34/60 (56%), Positives = 37/60 (61%), Gaps = 13/60 (21%)
 Frame = +1

Query: 397 FLHAPQPAPVFSPPPP----PPPPVYSPPPP----PPPVYSPPPPPP---SPPPP--SPP 537
           +   P   P +SPPPP    PPPP YSPPPP    PPP Y+ PPPPP   SPPPP  SPP
Sbjct: 423 YAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPP 482

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 17/65 (26%)
 Frame = +1

Query: 397 FLHAPQPAPVFSPPPP-----PPPPVYSPPPP---------PPPVYSPPPPPPSPPP--- 525
           +  +PQP+P +SPPPP     PP P+YSPPPP         P P +SPPPP  SPPP   
Sbjct: 272 YAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTPTPTFSPPPPAYSPPPTYS 331

Query: 526 PSPPS 540
           P PP+
Sbjct: 332 PPPPT 336

 Score = 67.0 bits (162), Expect = 8e-10
 Identities = 32/54 (59%), Positives = 34/54 (62%), Gaps = 13/54 (24%)
 Frame = +1

Query: 415 PAPVFSPPPPP----PPPVYSPPPPP----PPVYSPPPP-----PPSPPPPSPP 537
           P PV+SPPPPP    PPP Y PPPPP    PP +SPPPP     PP PP  SPP
Sbjct: 349 PPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPP 402

 Score = 67.0 bits (162), Expect = 8e-10
 Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 11/53 (20%)
 Frame = +1

Query: 415 PAPVFSPPPP------PPPPVYSPPP-----PPPPVYSPPPPPPSPPPPSPPS 540
           P P ++ PPP      PPPP YSPPP     PPPP YSPPPP  + PPP PP+
Sbjct: 419 PPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPT 471

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 22/75 (29%)
 Frame = +1

Query: 379 LYSHR*FLHAPQPAPVFSPPPP----------PPPPVYSPPPP-------PPPVYSPP-- 501
           +YS    +++P P P +SPPPP          PPPP +SPPPP       PPP YSPP  
Sbjct: 345 IYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLP 404

Query: 502 -PPPPSPPPP--SPP 537
            PP  SPPPP  SPP
Sbjct: 405 APPTYSPPPPTYSPP 419

 Score = 63.9 bits (154), Expect = 7e-09
 Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 13/57 (22%)
 Frame = +1

Query: 409 PQPAPVFSPPPP-------------PPPPVYSPPPPPPPVYSPPPPPPSPPPPSPPS 540
           PQP P +SPPPP             PPPP YSPPPP P +YSPPPP  SP PP  P+
Sbjct: 260 PQP-PTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSP-IYSPPPPAYSPSPPPTPT 314

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 32/58 (55%), Positives = 34/58 (58%), Gaps = 14/58 (24%)
 Frame = +1

Query: 403 HAP---QPAPVFSPPPPP----PPPVYSPPPP-------PPPVYSPPPPPPSPPPPSP 534
           HAP   QP+P+   PP P     PP YSPPPP       P P YSPPPP  SPPPPSP
Sbjct: 239 HAPPTHQPSPLRHLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSP 296

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 32/74 (43%), Positives = 38/74 (51%), Gaps = 26/74 (35%)
 Frame = +1

Query: 397 FLHAPQPAPVFSPP-----PPPPPPVYSPPPPP----PPVYSPPPP-------------- 507
           +   P P P +SPP     PPPP P+YSPPPP     PP +SPPPP              
Sbjct: 462 YAQPPPPPPTYSPPPPAYSPPPPSPIYSPPPPQVQPLPPTFSPPPPRRIHLPPPPHRQPR 521

Query: 508 PPSP---PPPSPPS 540
           PP+P    PPSPP+
Sbjct: 522 PPTPTYGQPPSPPT 535

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 32/62 (51%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
 Frame = +1

Query: 373 PNLYSHR*FLHAPQPAPVFSPPPP-----PPPPVYSPPPPPPPVYSPPPPPPSPPPP--S 531
           P  YS     ++P P     PPPP     PPPP YS PPPP P+YSPPPP   P PP  S
Sbjct: 445 PPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYS-PPPPSPIYSPPPPQVQPLPPTFS 503

Query: 532 PP 537
           PP
Sbjct: 504 PP 505

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 36/69 (52%), Positives = 40/69 (57%), Gaps = 14/69 (20%)
 Frame = +1

Query: 373 PNLYSHR*FLHAPQPA-PVFSPPPP-----PPPPVYSPPP----PPPPVYSPPPPPPSPP 522
           P  YS     + P P+ P++SPPPP     PPP  YSPPP    PPPP  SPPPP  SPP
Sbjct: 327 PPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPS-YSPPPPTYLPPPPPSSPPPPSFSPP 385

Query: 523 PP----SPP 537
           PP    SPP
Sbjct: 386 PPTYEQSPP 394

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 30/58 (51%), Positives = 34/58 (58%), Gaps = 15/58 (25%)
 Frame = +1

Query: 409 PQPAPVFSPPPP---PPPPVYSPPP------PPPPVYSPPPP------PPSPPPPSPP 537
           P P+P++SPPPP   P PP +SPPP      PPPP   P PP      PPSPP  SPP
Sbjct: 482 PPPSPIYSPPPPQVQPLPPTFSPPPPRRIHLPPPPHRQPRPPTPTYGQPPSPPTFSPP 539

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 26/48 (54%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
 Frame = +1

Query: 403 HAPQPAPVFSPPPPPPPPVYSPPPP--PPPVYSPPPPPPSPPPPSPPS 540
           H   P P ++ PPP P  +YSP P   PPP YSPPPP    P PSPPS
Sbjct: 175 HGHPPPPTYAQPPPTP--IYSPSPQVQPPPTYSPPPPTHVQPTPSPPS 220

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 23/41 (56%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
 Frame = +1

Query: 406 APQPAPVFSPPPP-----PPPPVYSPPPPPPPVYSPPPPPP 513
           AP P  + SPPPP     PP P Y  PP PP  YSPP PPP
Sbjct: 572 APPPRQIHSPPPPHRQPRPPTPTYGQPPSPPTTYSPPSPPP 612

[243][TOP]
>UniRef100_Q97F93 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Clostridium
           acetobutylicum RepID=Q97F93_CLOAB
          Length = 174

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 48/145 (33%), Positives = 79/145 (54%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    +++R EE     Y SID+V   ++R++RK K K        K  + LKF  
Sbjct: 50  VEVTIPFNGVILRGEETNNDMYASIDIVGDKLERQVRKQKTKL----ERRKYSDSLKFQN 105

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
           +                P    EE+   E+V+TK F + P++  EA+ ++E++ H+F+ F
Sbjct: 106 I----------------PDYHKEEQE-PEIVKTKRFAIKPMSEEEAVLEMELLGHNFFVF 148

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           +N ++ E+N+VYKRK+G YGLI P+
Sbjct: 149 QNGDSNEVNVVYKRKDGNYGLIEPE 173

[244][TOP]
>UniRef100_C7XW84 Sigma 54 modulation protein/SSU ribosomal protein S30P n=1
           Tax=Lactobacillus coleohominis 101-4-CHN
           RepID=C7XW84_9LACO
          Length = 179

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 49/146 (33%), Positives = 80/146 (54%)
 Frame = -1

Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287
           ++  V V + +  + +RAEE +   Y SIDLV+  ++R++RK K K     R  KG   L
Sbjct: 50  KTFKVEVTIPLPYLTLRAEETSNDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGLKNL 108

Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107
           +F    +P   G E+D ++I              VRTK   + P+   EA+ Q++M+ HD
Sbjct: 109 EF----VPGDDGTEDDSLKI--------------VRTKEISLKPMDSEEAVLQMDMLGHD 150

Query: 106 FYAFRNEETGEINIVYKRKEGGYGLI 29
           F+ F++ +T   ++VY+R +G YGLI
Sbjct: 151 FFIFQDADTNGTSVVYRRNDGRYGLI 176

[245][TOP]
>UniRef100_C6Q126 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Clostridium carboxidivorans P7 RepID=C6Q126_9CLOT
          Length = 175

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 51/145 (35%), Positives = 83/145 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           V V +    I++R EE  +  Y SIDLV   ++ ++RK K K     +     + LKF  
Sbjct: 50  VEVTIPFNGIILRGEEENDDMYASIDLVVDKLEGQIRKQKTKL----QRRTHSDSLKFQ- 104

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
             +P          ++ P KD EE    ++V+TK F + P++  EA+ Q+E++ H+F+ +
Sbjct: 105 -FIP----------DLEP-KDKEES---KIVKTKRFAIKPMSSEEAVLQMELLGHNFFVY 149

Query: 94  RNEETGEINIVYKRKEGGYGLIIPK 20
           ++ E GE+N+VYKRK+G YGLI P+
Sbjct: 150 KDAENGEVNVVYKRKDGNYGLIEPE 174

[246][TOP]
>UniRef100_C5NVZ2 Ribosome-associated factor Y n=1 Tax=Gemella haemolysans ATCC 10379
           RepID=C5NVZ2_9BACL
          Length = 181

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 48/142 (33%), Positives = 81/142 (57%)
 Frame = -1

Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
           + + V +  + +RAEE  E  Y ++DLV   ++R++RK K K    GR  KG     F+E
Sbjct: 54  IEITVPLRGVTLRAEETNEDLYAAVDLVVDKLERQMRKHKTKINRKGRE-KG-----FAE 107

Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
                       EI +T + ++ EE   ++ + K   + P+T  EA+ Q+E++ HDF+AF
Sbjct: 108 ------------EIILTSELEEAEETTLDLGKVKQLKVEPMTREEAVFQMELLGHDFFAF 155

Query: 94  RNEETGEINIVYKRKEGGYGLI 29
            +  T EI++VYKR++ GYG++
Sbjct: 156 LDNTTNEISVVYKRRDTGYGVL 177

[247][TOP]
>UniRef100_B7GE66 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
           RepID=B7GE66_PHATR
          Length = 209

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 22/195 (11%)
 Frame = -1

Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVV----------------VVVEVEKILVRAE 410
           T A+   V K +   +NKL +  A++   V+                VV  ++   +   
Sbjct: 23  TPALVEHVNKRIGGQINKLASNGAIQECDVILSVSKNPKVKNGHRVEVVTNLKGTSIICH 82

Query: 409 EHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFSEVILPLPSGDEEDE 236
             +   Y SID  S  + RKL K K+      HG    G + ++  E +        ED 
Sbjct: 83  NESPDMYASIDAASHALYRKLCKYKDNRVAGWHGGEKMGNDIMEVLENL--------EDV 134

Query: 235 IEITPQKDDEEELIEE---VVRTKYFDMP-PLTVFEAIDQLEMVDHDFYAFRNEETGEIN 68
            E T     EE +  E   + + K FD+  P++V EA+  L+ +DHDFY FRN ET EI+
Sbjct: 135 SEYTATPVAEEYVDPEAPTITKVKNFDLTKPMSVQEAVFALDYIDHDFYVFRNAETNEIS 194

Query: 67  IVYKRKEGGYGLIIP 23
           +VYKR  GG GL+ P
Sbjct: 195 VVYKRHVGGIGLVEP 209

[248][TOP]
>UniRef100_P47995 Uncharacterized protein Sca_0400 n=1 Tax=Staphylococcus carnosus
           subsp. carnosus TM300 RepID=Y400_STACT
          Length = 188

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
 Frame = -1

Query: 472 AVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN 293
           A  S  + V + +  + +RAEE  +  Y  IDL+++ ++R++RK K +           N
Sbjct: 48  ANSSTKIEVTIPLNDVTLRAEERNDDLYAGIDLITNKLERQVRKYKTRV----------N 97

Query: 292 RLKFSEVIL-PLPSGDEED-EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 119
           R K  E    P P+  E   E  +   KDDE E+I    R+K F + P+   EA+ Q+++
Sbjct: 98  RKKRKESEHEPFPATPETPPETAVDHDKDDEIEII----RSKQFSLKPMDSEEAVLQMDL 153

Query: 118 VDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
           + HDF+ F + ET   +IVY+RK+G YGLI
Sbjct: 154 LGHDFFIFNDRETDGTSIVYRRKDGKYGLI 183

[249][TOP]
>UniRef100_Q9CHS8 Putative uncharacterized protein ygdA n=1 Tax=Lactococcus lactis
           subsp. lactis RepID=Q9CHS8_LACLA
          Length = 185

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
 Frame = -1

Query: 511 EVAAVVN-KLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIK 335
           EV A VN K+ +E   +   V V +  + + +RAE+ ++  Y SID V   ++R++RK K
Sbjct: 37  EVTAYVNLKVYSEKRAK---VEVTLPAKNVTLRAEDTSQDMYSSIDFVEEKLERQIRKYK 93

Query: 334 EKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPP 155
            +     R+   P    F +   PL   DE  E  +            ++VRTK+  + P
Sbjct: 94  TRMNRKPRNAV-PTGQAFGDEFAPLEKADEVAEDHV------------DIVRTKHVALKP 140

Query: 154 LTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
           +   EA+ Q++M+ HDFY F + ++   ++VY+R +G YGLI
Sbjct: 141 MDAEEAVLQMDMLGHDFYVFTDADSNGTHVVYRRTDGRYGLI 182

[250][TOP]
>UniRef100_A5VB72 Filamentous haemagglutinin family outer membrane protein n=1
            Tax=Sphingomonas wittichii RW1 RepID=A5VB72_SPHWW
          Length = 1531

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 34/45 (75%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
 Frame = +1

Query: 409  PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPP--SPPPPSPP 537
            P P PV  PPPPPPPPV  PPPPPPP  SPPPPPP  SPPPP PP
Sbjct: 1269 PPPPPVSPPPPPPPPPVSPPPPPPPPPVSPPPPPPPVSPPPPPPP 1313

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 31/39 (79%), Positives = 31/39 (79%)
 Frame = +1

Query: 409  PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPP 525
            P P P  SPPPPPPPP  SPPPPPPPV SPPPPPP PPP
Sbjct: 1279 PPPPPPVSPPPPPPPPPVSPPPPPPPV-SPPPPPPPPPP 1316

 Score = 73.6 bits (179), Expect = 9e-12
 Identities = 30/39 (76%), Positives = 30/39 (76%), Gaps = 4/39 (10%)
 Frame = +1

Query: 433  PPPPPPPPVYSPPPPPPPVYSPPPPPP----SPPPPSPP 537
            PPPPPPPPV  PPPPPPP  SPPPPPP    SPPPP PP
Sbjct: 1266 PPPPPPPPVSPPPPPPPPPVSPPPPPPPPPVSPPPPPPP 1304

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 28/38 (73%), Positives = 28/38 (73%)
 Frame = +1

Query: 424  VFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537
            V  PPPPPPPP  SPPPPPPP    PPPPP PPP SPP
Sbjct: 1262 VSPPPPPPPPPPVSPPPPPPPPPVSPPPPPPPPPVSPP 1299