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[1][TOP] >UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6T7E3_SOYBN Length = 291 Score = 208 bits (530), Expect = 2e-52 Identities = 110/141 (78%), Positives = 122/141 (86%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 +VRAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK E + LP E Sbjct: 139 VVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVEQLPV--E 196 Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65 EDEI ++PQ +EEE I+EVVRTKYFDMPPLTV EAI+QLE VDHDFY FRNEETGEINI Sbjct: 197 EDEI-LSPQ--EEEESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINI 253 Query: 64 VYKRKEGGYGLIIPKGNGEVD 2 VYKRKEGGYGLI+PKG+GE + Sbjct: 254 VYKRKEGGYGLIVPKGDGEAE 274 [2][TOP] >UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001984F94 Length = 298 Score = 200 bits (509), Expect = 5e-50 Identities = 101/141 (71%), Positives = 118/141 (83%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 +VRAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG NRLK + PL Sbjct: 146 VVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPLV---- 201 Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65 E+E ++ PQK+D + LI E+VRTKYFDMPPLTV EA++QLE VDHDF+ FRNEETGEINI Sbjct: 202 EEEADVVPQKEDGD-LINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINI 260 Query: 64 VYKRKEGGYGLIIPKGNGEVD 2 +YKRK GGYGLIIPK NG+ + Sbjct: 261 LYKRKAGGYGLIIPKENGKTE 281 [3][TOP] >UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7QEV5_VITVI Length = 230 Score = 200 bits (509), Expect = 5e-50 Identities = 101/141 (71%), Positives = 118/141 (83%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 +VRAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG NRLK + PL Sbjct: 78 VVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPLV---- 133 Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65 E+E ++ PQK+D + LI E+VRTKYFDMPPLTV EA++QLE VDHDF+ FRNEETGEINI Sbjct: 134 EEEADVVPQKEDGD-LINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINI 192 Query: 64 VYKRKEGGYGLIIPKGNGEVD 2 +YKRK GGYGLIIPK NG+ + Sbjct: 193 LYKRKAGGYGLIIPKENGKTE 213 [4][TOP] >UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR Length = 306 Score = 198 bits (503), Expect = 2e-49 Identities = 105/141 (74%), Positives = 115/141 (81%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 +VRAEE AET Y SIDLVSSIIQRKLRKIKEKE+DHGRHMKG NRLK E P+P E Sbjct: 154 VVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVRE---PVPQVVE 210 Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65 D E++ Q + E+ IEEVVRTK+FDMPPLTV EAI+QLE VDHDFY FRNEETGEINI Sbjct: 211 GDADEVSQQ--EVEDSIEEVVRTKFFDMPPLTVSEAIEQLENVDHDFYGFRNEETGEINI 268 Query: 64 VYKRKEGGYGLIIPKGNGEVD 2 VYKRK GGYGLIIPKGN E + Sbjct: 269 VYKRKAGGYGLIIPKGNDEAE 289 [5][TOP] >UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR Length = 231 Score = 195 bits (495), Expect = 2e-48 Identities = 99/141 (70%), Positives = 115/141 (81%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 +VRAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG NRLK E + + D+ Sbjct: 78 VVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQVVVEDD 137 Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65 DE+ + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE V HDFY FR+EETGEINI Sbjct: 138 ADEVS----QQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINI 193 Query: 64 VYKRKEGGYGLIIPKGNGEVD 2 +YKRK GGYGLIIPKGNGE + Sbjct: 194 IYKRKAGGYGLIIPKGNGEAE 214 [6][TOP] >UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa RepID=A9PHY3_POPTR Length = 306 Score = 195 bits (495), Expect = 2e-48 Identities = 99/141 (70%), Positives = 115/141 (81%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 +VRAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG NRLK E + + D+ Sbjct: 153 VVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQVVVEDD 212 Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65 DE+ + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE V HDFY FR+EETGEINI Sbjct: 213 ADEVS----QQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINI 268 Query: 64 VYKRKEGGYGLIIPKGNGEVD 2 +YKRK GGYGLIIPKGNGE + Sbjct: 269 IYKRKAGGYGLIIPKGNGEAE 289 [7][TOP] >UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SEK8_RICCO Length = 311 Score = 192 bits (488), Expect = 1e-47 Identities = 98/141 (69%), Positives = 115/141 (81%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 ++RAEE AET Y SIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK E + P D+ Sbjct: 156 VIRAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVAE-PVKDD 214 Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65 DE++ D++E+ I+EVVRTKYFDMPPLTV EAI+QL+ VDHDFY FRNEETGEINI Sbjct: 215 TDEVDGV-LGDEDEDYIDEVVRTKYFDMPPLTVSEAIEQLKNVDHDFYGFRNEETGEINI 273 Query: 64 VYKRKEGGYGLIIPKGNGEVD 2 +YKRK GGYG+IIPK NG+ + Sbjct: 274 IYKRKAGGYGIIIPKENGKAE 294 [8][TOP] >UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis thaliana RepID=Q9FLV3_ARATH Length = 365 Score = 188 bits (477), Expect = 2e-46 Identities = 93/142 (65%), Positives = 117/142 (82%), Gaps = 1/142 (0%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 +VRAEE AET Y IDLVS+IIQRKLRKIKEK++DHGRHMKG NRLK E ++ D Sbjct: 207 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 266 Query: 244 EDEIEITP-QKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 68 ED + + ++++E++LI+E+VRTK F+MPPLTV EA++QLE+V HDFY F+NEETGEIN Sbjct: 267 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 326 Query: 67 IVYKRKEGGYGLIIPKGNGEVD 2 IVYKRKEGGYGLIIPK +G+ + Sbjct: 327 IVYKRKEGGYGLIIPKKDGKAE 348 [9][TOP] >UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea RepID=RR30_SPIOL Length = 302 Score = 180 bits (456), Expect = 7e-44 Identities = 93/138 (67%), Positives = 109/138 (78%), Gaps = 3/138 (2%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE---VILPLPS 254 ++RAEE AE+ Y SIDLVSSIIQRKLRKIK+K +DHGRHMKG NR K + V + Sbjct: 143 VIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHMKGFNRSKVRDPEPVRITREE 202 Query: 253 GDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 74 EE E P ++++ IEEVVRTKYFDMPPLT+ EA++QLE VDHDFYAFRNEETG+ Sbjct: 203 VLEEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGD 262 Query: 73 INIVYKRKEGGYGLIIPK 20 INI+YKRKEGGYGLIIPK Sbjct: 263 INILYKRKEGGYGLIIPK 280 [10][TOP] >UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum RepID=C9EFD1_SOLTU Length = 280 Score = 179 bits (453), Expect = 2e-43 Identities = 94/149 (63%), Positives = 117/149 (78%), Gaps = 8/149 (5%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS--EVILPLPSG 251 ++RAEE AE+ YGSID+VSSIIQRKLRKIKEK++DHGRHMKG +RLK EV+L Sbjct: 125 VIRAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEVLLV---- 180 Query: 250 DEEDEIEITPQKDDEEE------LIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 ++++E PQ+++ E+ + EVVR K FDMPPL+V EAI+QLE VDHDFY FRN Sbjct: 181 --QEDLETLPQEEEVEDDDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRN 238 Query: 88 EETGEINIVYKRKEGGYGLIIPKGNGEVD 2 EETGEINIVY+RKEGGYGLIIPK +G+ + Sbjct: 239 EETGEINIVYRRKEGGYGLIIPKEDGKTE 267 [11][TOP] >UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum RepID=Q672Q2_SOLLC Length = 311 Score = 172 bits (436), Expect = 1e-41 Identities = 90/142 (63%), Positives = 109/142 (76%), Gaps = 1/142 (0%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 ++RAEE E+ YGSID+VSSIIQRKLRKIKEK++D GRHMKG +RLK + L D Sbjct: 153 VIRAEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVRDPEALLVQEDL 212 Query: 244 EDEIEITPQKDDEEE-LIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 68 E + +DD+ + + EVVR K FDMPPL+V EAI+QLE VDHDFY FRNEETGEIN Sbjct: 213 ETLSQEEEVEDDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRNEETGEIN 272 Query: 67 IVYKRKEGGYGLIIPKGNGEVD 2 IVY+RKEGGYGLIIPK +G+ + Sbjct: 273 IVYRRKEGGYGLIIPKEDGKTE 294 [12][TOP] >UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays RepID=B6TYP8_MAIZE Length = 309 Score = 152 bits (385), Expect = 1e-35 Identities = 82/144 (56%), Positives = 108/144 (75%), Gaps = 3/144 (2%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP---LPS 254 ++RAEE AE+TY SIDL ++I++RKLRKIKEKET+ R G + + I P LP Sbjct: 140 VLRAEEDAESTYASIDLAAAIVKRKLRKIKEKETEVRR---GGDADGVWDEIPPADLLPP 196 Query: 253 GDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 74 E D++E +DEE ++ +VVRTK F+MPPLTV EA++QLE VDHDFY FR+E TG+ Sbjct: 197 A-EADDLEAAVGAEDEETVLAKVVRTKVFEMPPLTVEEALEQLENVDHDFYCFRDEATGQ 255 Query: 73 INIVYKRKEGGYGLIIPKGNGEVD 2 +NI+Y+RKEGGYGLIIPK +G+VD Sbjct: 256 VNILYRRKEGGYGLIIPKNDGKVD 279 [13][TOP] >UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ Length = 309 Score = 151 bits (381), Expect = 3e-35 Identities = 80/146 (54%), Positives = 111/146 (76%), Gaps = 6/146 (4%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 ++RAEE AE+TY SIDL SSII+RKLRKIKEKETD RH+KG + S+ L ++ Sbjct: 149 VIRAEEDAESTYASIDLASSIIKRKLRKIKEKETDV-RHLKG-TKPPVSDWPPSLLDNND 206 Query: 244 ED------EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 83 +D ++E +DE+ ++ +VVRTK F+MPPL+V EA++QL VDH+FYAFR+E+ Sbjct: 207 DDAQAQLKDLEEAVGAEDEDTVLTKVVRTKVFEMPPLSVEEAMEQLVNVDHNFYAFRDEK 266 Query: 82 TGEINIVYKRKEGGYGLIIPKGNGEV 5 TGE+N++YKRKEGG+GLI+PKG+G + Sbjct: 267 TGEMNVLYKRKEGGFGLIVPKGDGHL 292 [14][TOP] >UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum bicolor RepID=C5WRX8_SORBI Length = 310 Score = 147 bits (372), Expect = 4e-34 Identities = 79/143 (55%), Positives = 104/143 (72%), Gaps = 2/143 (1%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGD- 248 ++RAEE AE+TY SIDL ++II+RKLRKIKEKET+ R G + E LPL D Sbjct: 140 VLRAEEDAESTYASIDLAAAIIKRKLRKIKEKETEVRRDGDGGAGGAWEEE-LPLLDDDL 198 Query: 247 -EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 71 E DE+ +DE+ ++ +VVRTK F+MPPLTV EA++QL+ V H+FY FR+E TG++ Sbjct: 199 VEADELAAAVGAEDEQTVVAKVVRTKVFEMPPLTVEEALEQLDNVGHNFYCFRDEATGQV 258 Query: 70 NIVYKRKEGGYGLIIPKGNGEVD 2 NI+Y+RKEGGYGLIIPK +G D Sbjct: 259 NILYRRKEGGYGLIIPKEDGNFD 281 [15][TOP] >UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LMC5_PICSI Length = 321 Score = 147 bits (372), Expect = 4e-34 Identities = 79/145 (54%), Positives = 102/145 (70%), Gaps = 8/145 (5%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 +VRAEE AET Y SID+VS II+RKLRKIKEK+ HGR K + K E++ + + Sbjct: 156 VVRAEEEAETIYASIDIVSDIIRRKLRKIKEKDGGHGRPSKMRKQPKLGELLSTVVMDVK 215 Query: 244 ED-EIEITPQKDDEE-------ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 E + E+ D EE +L +EVVRTKYF+MPP++ EA++QL VDHDFYAFRN Sbjct: 216 ETRDKELDDLADVEEMRYEKIDDLSDEVVRTKYFEMPPMSPEEALEQLMNVDHDFYAFRN 275 Query: 88 EETGEINIVYKRKEGGYGLIIPKGN 14 E+GE+N++YKRK GGYGLI+PK N Sbjct: 276 MESGEVNVLYKRKHGGYGLIVPKNN 300 [16][TOP] >UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RWK9_PHYPA Length = 221 Score = 134 bits (336), Expect = 6e-30 Identities = 72/135 (53%), Positives = 93/135 (68%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 +VRAEE AE+ Y SID VS +I RKLRKIKEK+ HGR K + + EV+ S + Sbjct: 78 VVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPTKSRHSPRIGEVL----SDEV 133 Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65 D I +K D+ L +E+VRTKYF+M P+ EA++QL V HDFYAFRN E+GEINI Sbjct: 134 VDLDPILGRKPDD--LPDEIVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINI 191 Query: 64 VYKRKEGGYGLIIPK 20 +YKR GGYG+I+P+ Sbjct: 192 LYKRTHGGYGIIVPR 206 [17][TOP] >UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TA00_PHYPA Length = 297 Score = 132 bits (331), Expect = 2e-29 Identities = 74/137 (54%), Positives = 94/137 (68%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 +VRAEE AE+ Y SID VS +I RKLRKIKEK+ HGR K R+ EV+ S + Sbjct: 156 VVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPAKYSPRI--GEVL----SNEV 209 Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65 D I +K D+ L +EVVRTKYF+M P+ EA++QL V HDFYAFRN E+GEINI Sbjct: 210 VDLDPILERKPDD--LPDEVVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINI 267 Query: 64 VYKRKEGGYGLIIPKGN 14 +YKR GGYG+I+P+ + Sbjct: 268 LYKRTHGGYGIIVPRND 284 [18][TOP] >UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DKM6_THEEB Length = 209 Score = 129 bits (324), Expect = 1e-28 Identities = 75/143 (52%), Positives = 92/143 (64%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V V ++RAEE +E Y SIDLV+ I RKLRK+KEK D R K N + EV+ Sbjct: 58 VTVFVNGSVIRAEESSENLYASIDLVADKIARKLRKLKEKRQDKSR-AKDTNSVVEPEVV 116 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 L GD TPQ L E+VVR KYF MPP+T+ EA++ LEMVDHDFY FRN Sbjct: 117 TDLV-GDR------TPQ------LPEQVVRMKYFAMPPMTIQEALEHLEMVDHDFYVFRN 163 Query: 88 EETGEINIVYKRKEGGYGLIIPK 20 +TGEIN+VY+R GGYG+I P+ Sbjct: 164 RDTGEINVVYERNHGGYGVIQPR 186 [19][TOP] >UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IVM1_NOSP7 Length = 214 Score = 127 bits (318), Expect = 7e-28 Identities = 70/150 (46%), Positives = 94/150 (62%), Gaps = 1/150 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + ++RAEE +E Y SIDLV+ I R+LRK KE+ D + P + +E + Sbjct: 58 VTIYANGSVIRAEESSENLYASIDLVADKIARQLRKYKERRQDQ-KTQSQPTEVVVAESV 116 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 +P GD TP EL EVVRTKYF MPP+T+ EA++QL++V HDFY FRN Sbjct: 117 VPDLIGDR------TP------ELPNEVVRTKYFSMPPMTLAEALEQLQLVGHDFYMFRN 164 Query: 88 EETGEINIVYKRKEGGYGLIIPK-GNGEVD 2 ETGEIN++Y+R GGYG+I P+ GNG + Sbjct: 165 SETGEINVIYERNHGGYGVIHPRNGNGHTN 194 [20][TOP] >UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4 Length = 209 Score = 126 bits (317), Expect = 9e-28 Identities = 73/144 (50%), Positives = 92/144 (63%), Gaps = 1/144 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD-HGRHMKGPNRLKFSEV 272 V + ++RAEE +E Y SIDLVS I R+LRK KE+ D H R + P V Sbjct: 58 VTIYTNGSVIRAEESSENLYASIDLVSDKIARQLRKFKERRQDKHSRSKEEP------VV 111 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 +PL + D TP EL EEVVRTKYF MPP+T+ EA++QLE+VDHDFY FR Sbjct: 112 SVPLVTDLTGDR---TP------ELPEEVVRTKYFAMPPMTLREALEQLELVDHDFYMFR 162 Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20 N ETGEIN++Y+R GGYG+I P+ Sbjct: 163 NAETGEINVIYERNHGGYGVIQPR 186 [21][TOP] >UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YSA5_ANASP Length = 213 Score = 124 bits (311), Expect = 4e-27 Identities = 67/145 (46%), Positives = 88/145 (60%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + ++RAEE +E Y SIDLV+ I R+LRK KE++ D + E + Sbjct: 58 VTIYANGSVIRAEESSENLYASIDLVADKISRQLRKYKERKQDQKTQAQPTTETIVPETV 117 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 + GD TP EL EEVVRTKYF MPP+TV EA++QL++V HDFY F N Sbjct: 118 VADLIGDR------TP------ELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHN 165 Query: 88 EETGEINIVYKRKEGGYGLIIPKGN 14 ETGEIN++Y+R GGYG+I P+ N Sbjct: 166 AETGEINVIYERNHGGYGVIQPRNN 190 [22][TOP] >UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT Length = 213 Score = 124 bits (310), Expect = 6e-27 Identities = 67/145 (46%), Positives = 90/145 (62%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + ++RAEE +E Y SIDLV+ I R+LRK KE++ D + L +E I Sbjct: 58 VTIYANGSVIRAEESSENLYASIDLVADKISRQLRKYKERKQD-----QKTQALPTTETI 112 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 +P + + D EL EEVVRTKYF MPP+TV EA++QL++V HDFY F N Sbjct: 113 VP-------ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHN 165 Query: 88 EETGEINIVYKRKEGGYGLIIPKGN 14 ETGEIN++Y+R GGYG+I P+ N Sbjct: 166 AETGEINVIYERNHGGYGVIQPRNN 190 [23][TOP] >UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2 Tax=Cyanothece RepID=C7QW97_CYAP0 Length = 205 Score = 122 bits (306), Expect = 2e-26 Identities = 75/164 (45%), Positives = 97/164 (59%) Frame = -1 Query: 505 AAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 326 A + NK AE V V ++RA+E +E+ Y SIDLVS I R+LRK KEK Sbjct: 55 ARITNKHKAE---------VTVYANGTVIRAQEGSESLYASIDLVSDKIARQLRKYKEKL 105 Query: 325 TDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTV 146 + K PN +K EV + E D I D EL EV+R KYF MPP+T+ Sbjct: 106 NNK----KAPNPVKVGEVTTA--TAIEGDLIG-----DRTPELPAEVIRMKYFAMPPMTI 154 Query: 145 FEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGN 14 EA+ QLE+VDHDFY FRN++T EIN++Y+R GGYG+I P G+ Sbjct: 155 DEALHQLELVDHDFYMFRNKDTDEINVIYQRNHGGYGVIQPHGS 198 [24][TOP] >UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc azollae' 0708 RepID=B9YPU1_ANAAZ Length = 214 Score = 120 bits (302), Expect = 5e-26 Identities = 67/143 (46%), Positives = 86/143 (60%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + ++RAEE +E Y SIDLV+ I R+LRK KE+ DH N +E + Sbjct: 58 VTIYANGSVIRAEESSENLYASIDLVADKIARQLRKYKERRQDHKTQPIPTNEAVVAEPV 117 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 GD TP EL EVVRTKYF MPP+T+ EA +QL++V HDFY FRN Sbjct: 118 ADSLIGDR------TP------ELPGEVVRTKYFPMPPMTLAEAQEQLQLVGHDFYMFRN 165 Query: 88 EETGEINIVYKRKEGGYGLIIPK 20 ETGEIN++Y+R GGYG+I P+ Sbjct: 166 AETGEINVIYERNHGGYGVIQPR 188 [25][TOP] >UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CDL4_ACAM1 Length = 212 Score = 120 bits (301), Expect = 6e-26 Identities = 65/144 (45%), Positives = 95/144 (65%), Gaps = 1/144 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + V ++RAEE +E Y SIDLV+ I R+LRK KEK R KGPN+ Sbjct: 58 VTLFVNGSVIRAEESSENLYASIDLVADKIARQLRKYKEK-----RQTKGPNKGSNRSKA 112 Query: 268 LPLPSGDEEDEI-EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 + L + +E+ I ++T +D EL EEVVR KYF + P++V +A++QL++VDHDFY F Sbjct: 113 VALQTPEEQPLIGDLT--RDRAPELPEEVVRCKYFAISPMSVHDALEQLDLVDHDFYVFE 170 Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20 N +TG++N++Y+R GGYG+I P+ Sbjct: 171 NADTGQLNVIYERNHGGYGVIQPR 194 [26][TOP] >UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP Length = 213 Score = 120 bits (300), Expect = 8e-26 Identities = 66/137 (48%), Positives = 85/137 (62%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 ++RAEE +E Y SIDLV+ I R+LRK KE+ D + N++ E + GD Sbjct: 66 VIRAEESSENLYASIDLVADKIARQLRKYKERLQDQKTNAPPTNQVLVPEPVAADLIGDR 125 Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65 TP EL EVVRTKYF MPP+TV EA +QL++V HDFY F N ETGEIN+ Sbjct: 126 ------TP------ELPNEVVRTKYFSMPPMTVAEATEQLQLVGHDFYMFHNAETGEINV 173 Query: 64 VYKRKEGGYGLIIPKGN 14 +Y+R GGYG+I P+ N Sbjct: 174 IYERNHGGYGVIQPRHN 190 [27][TOP] >UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VJW0_9CYAN Length = 215 Score = 119 bits (299), Expect = 1e-25 Identities = 71/150 (47%), Positives = 92/150 (61%), Gaps = 1/150 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + K ++RA+E +E Y SIDLV+ IQR+LRK KEK+ K + K VI Sbjct: 58 VTIYANKTVIRAQESSEDLYASIDLVADKIQRQLRKYKEKQ-----QKKTQTQPKTGAVI 112 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 P ED I D EL EVVR KYF MPP+T+ EA +QL++VDHDFY FRN Sbjct: 113 HEAPV--VEDLIG-----DRTPELPTEVVRMKYFAMPPMTIEEATEQLQLVDHDFYMFRN 165 Query: 88 EETGEINIVYKRKEGGYGLIIPK-GNGEVD 2 +T EIN++Y+R GGYG+I P+ GNG + Sbjct: 166 AKTDEINVIYERNHGGYGVIQPRNGNGHTN 195 [28][TOP] >UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WZE1_CYAA5 Length = 201 Score = 119 bits (298), Expect = 1e-25 Identities = 75/172 (43%), Positives = 98/172 (56%) Frame = -1 Query: 517 VKEVAAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKI 338 V + A + NK AE V V ++RA+E +E Y SIDLVS I R+LRK Sbjct: 46 VAKNARITNKHKAE---------VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKY 96 Query: 337 KEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMP 158 KEK +H K + +K EV+ E EIE D E L EV+R KYF MP Sbjct: 97 KEKINNH----KPQSSVKNPEVL-------PEREIEKDLIGDREAALPPEVIRMKYFAMP 145 Query: 157 PLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGNGEVD 2 P+++ EA QLE+VDHDFY FRN++T EIN++Y R GG+G+I P+ E D Sbjct: 146 PMSIEEAKHQLELVDHDFYMFRNQDTDEINVIYMRNHGGFGVIQPREPNEND 197 [29][TOP] >UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JS19_SYNJA Length = 191 Score = 119 bits (297), Expect = 2e-25 Identities = 72/172 (41%), Positives = 93/172 (54%), Gaps = 7/172 (4%) Frame = -1 Query: 517 VKEVAAVVNKLVAEAAVESIPVV-------VVVEVEKILVRAEEHAETTYGSIDLVSSII 359 VK A + +++ +V P + V V ++RAEE +E Y SID V+ + Sbjct: 29 VKHFAQITSEVDVNLSVARNPRISANQSAEVTVYANGTVIRAEESSENLYASIDRVADKL 88 Query: 358 QRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVR 179 RKLRK KE+ H + ++ L P E + EL EVVR Sbjct: 89 ARKLRKYKERNGVHRIRHSPKTSVAVAQQPLTDPLNTER-----------QAELPPEVVR 137 Query: 178 TKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23 TKYF MPP+TV EA+ QLE+VDHDFY FRN E GEIN++Y RK GGYGLI P Sbjct: 138 TKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEINVIYVRKHGGYGLIRP 189 [30][TOP] >UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806 RepID=A8YEZ8_MICAE Length = 199 Score = 118 bits (296), Expect = 2e-25 Identities = 71/173 (41%), Positives = 100/173 (57%), Gaps = 7/173 (4%) Frame = -1 Query: 517 VKEVAAVVNKLVAEAAVES---IP----VVVVVEVEKILVRAEEHAETTYGSIDLVSSII 359 VK + K+ +VE IP V V ++RA+E +E Y SIDLVS I Sbjct: 28 VKHFNGITTKVDVHLSVEKNARIPDRHKAEVTVYANGTVIRAQEGSENLYASIDLVSDKI 87 Query: 358 QRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVR 179 R+LRK KE+ DH H + +K SEV+ +E ++ D EL EVVR Sbjct: 88 ARQLRKYKERLVDHRTH----STVKTSEVV-------QEKPLDDNLIGDRTPELPAEVVR 136 Query: 178 TKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20 KYF MPP+T+ EA+ QL++VDHDF+ F N++T EIN++Y+R GG+G+I P+ Sbjct: 137 MKYFAMPPMTIEEALTQLQLVDHDFFMFCNKDTNEINVIYQRNHGGFGVIQPR 189 [31][TOP] >UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YIH4_9CYAN Length = 212 Score = 118 bits (295), Expect = 3e-25 Identities = 68/146 (46%), Positives = 93/146 (63%), Gaps = 1/146 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + ++RA+E +E Y SIDLV+ I R+LRK K+K G+H+ P K +EV+ Sbjct: 58 VTIYANGTVIRAQESSENLYASIDLVADKIARQLRKFKDKR--QGKHLHPP---KLAEVV 112 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 P ED I D + EL EVVRTKYF MPP+ + +A++QL++VDHDFY F N Sbjct: 113 ENQPV--IEDLIG-----DRQPELPPEVVRTKYFAMPPMNLQDALEQLQLVDHDFYVFCN 165 Query: 88 EETGEINIVYKR-KEGGYGLIIPKGN 14 +TGE+N++YKR GGYGLI P+ N Sbjct: 166 ADTGELNVIYKRVNHGGYGLIQPRNN 191 [32][TOP] >UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7 Length = 199 Score = 117 bits (294), Expect = 4e-25 Identities = 62/143 (43%), Positives = 91/143 (63%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V ++RA+E +E Y SIDLVS I R+LRK KE++ + H + +K EV+ Sbjct: 58 VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKERKLEQNAH----SPVKAGEVV 113 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 +++ IE D + EL EVVR KYF MPP+++ EA++QL++VDHDF+ FRN Sbjct: 114 -------QQETIEENLIGDRQPELPPEVVRMKYFGMPPMSIDEALEQLQLVDHDFFMFRN 166 Query: 88 EETGEINIVYKRKEGGYGLIIPK 20 +T EIN++Y R GG+G+I P+ Sbjct: 167 RDTNEINVIYIRNHGGFGVIQPR 189 [33][TOP] >UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT Length = 199 Score = 117 bits (293), Expect = 5e-25 Identities = 67/149 (44%), Positives = 89/149 (59%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V ++RA+E +E Y SIDLVS I R+LRK KEK ++H K + K EV+ Sbjct: 58 VTVYANGTVIRAQEGSENLYASIDLVSDKISRQLRKYKEKVSNH----KPQSSAKLPEVL 113 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 E E+ D + EL EV+R KYF MP +++ EA QLE+VDHDFY FRN Sbjct: 114 -------PEKEVSEDLIGDRQAELPPEVIRMKYFAMPSMSIEEAKHQLELVDHDFYMFRN 166 Query: 88 EETGEINIVYKRKEGGYGLIIPKGNGEVD 2 +ET EIN++Y R GG+G+I P+ E D Sbjct: 167 QETEEINVIYMRNHGGFGIIQPREANEND 195 [34][TOP] >UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI Length = 187 Score = 117 bits (292), Expect = 7e-25 Identities = 62/143 (43%), Positives = 87/143 (60%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V+ ++RAEE E Y SIDLV+ + R++RK KE+ + G ++ Sbjct: 58 VTVQASGTIIRAEEETENLYASIDLVADKLHRQMRKYKERMQKKPKPKTG--LAVANQAP 115 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 + LP+GDE+ L +EVVRTKYF MPP++ EA+D L +VDHDF+ FRN Sbjct: 116 ISLPNGDEK-----------ATALPKEVVRTKYFAMPPMSPEEALDHLALVDHDFFVFRN 164 Query: 88 EETGEINIVYKRKEGGYGLIIPK 20 E+GEIN++Y R GGYGLI+P+ Sbjct: 165 AESGEINVLYARNHGGYGLIVPR 187 [35][TOP] >UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB Length = 190 Score = 117 bits (292), Expect = 7e-25 Identities = 69/144 (47%), Positives = 85/144 (59%), Gaps = 1/144 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKFSEV 272 V V ++RAEE +E Y SID V+ + RKLRK KE+ H RH K S Sbjct: 59 VTVYANGTVIRAEESSENLYASIDRVADKLARKLRKYKERNGIHRVRHTP-----KTSVA 113 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 + P D + + + EL EVVRTKYF MPP+TV EA+ QLE+VDHDFY FR Sbjct: 114 VAQQPVTDPLNT-------ERQAELPAEVVRTKYFAMPPMTVQEALHQLELVDHDFYVFR 166 Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20 N E GEIN++Y R GGYGLI P+ Sbjct: 167 NIENGEINVIYVRNHGGYGLIRPR 190 [36][TOP] >UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IRI7_9CHRO Length = 199 Score = 117 bits (292), Expect = 7e-25 Identities = 69/149 (46%), Positives = 91/149 (61%), Gaps = 2/149 (1%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH--MKGPNRLKFSE 275 V V ++RA+E +E Y SIDLVS I R+LRK KEK +H +K P+ L +E Sbjct: 58 VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNHKPQSSVKSPDVLPETE 117 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 V +ED I D E EL EV+R KYF MPP+++ EA QLE+VDHDFY F Sbjct: 118 V--------KEDLIG-----DREVELPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYMF 164 Query: 94 RNEETGEINIVYKRKEGGYGLIIPKGNGE 8 RN++T EIN++Y R GG+G+I P+ E Sbjct: 165 RNQDTDEINVIYMRNHGGFGVIQPRETHE 193 [37][TOP] >UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa NIES-843 RepID=B0JSS1_MICAN Length = 199 Score = 116 bits (291), Expect = 9e-25 Identities = 71/173 (41%), Positives = 100/173 (57%), Gaps = 7/173 (4%) Frame = -1 Query: 517 VKEVAAVVNKLVAEAAVES---IP----VVVVVEVEKILVRAEEHAETTYGSIDLVSSII 359 VK + K+ +VE IP V V ++RA+E +E Y SIDLVS I Sbjct: 28 VKHFNGITTKVDVHLSVEKNARIPDRHRAEVTVYANGTVIRAQEGSENLYASIDLVSDKI 87 Query: 358 QRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVR 179 R+LRK KE+ DH + +K SEV+ +E ++ + D EL EVVR Sbjct: 88 ARQLRKYKERLVDHRTNAP----VKTSEVV-------QEKPLDGSLIGDRTPELPAEVVR 136 Query: 178 TKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20 KYF MPP+T+ EA+ QL++VDHDFY F N++T EIN++Y+R GG+G+I P+ Sbjct: 137 MKYFAMPPMTIEEALTQLQLVDHDFYMFCNKDTNEINVIYQRNHGGFGVIQPR 189 [38][TOP] >UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE Length = 224 Score = 115 bits (288), Expect = 2e-24 Identities = 66/169 (39%), Positives = 101/169 (59%), Gaps = 7/169 (4%) Frame = -1 Query: 499 VVNKLVAEAAVESIPVV-------VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRK 341 ++NK+ +V++ P + V V + ++VRAEE +E+ Y SID+V+ + R+LRK Sbjct: 34 LINKVDVCLSVQNNPRIAPKQTAEVTVFLNNVVVRAEESSESLYASIDMVTDKLTRQLRK 93 Query: 340 IKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDM 161 KEK D P + + + P + D E+ + + +L + VVR+KYF M Sbjct: 94 YKEKRRDQDHATVRPTDVD-ATINAPDITSHNADISEVL---NHQPKLPDTVVRSKYFAM 149 Query: 160 PPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGN 14 PP+TV A++ LE+V HDFY FRN ETGEIN++Y+R GYGL+ P+ N Sbjct: 150 PPMTVQTALENLELVGHDFYMFRNVETGEINVIYERNHKGYGLLQPRQN 198 [39][TOP] >UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002 RepID=LRTA_SYNP2 Length = 193 Score = 114 bits (286), Expect = 4e-24 Identities = 65/143 (45%), Positives = 86/143 (60%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V ++RA+E +E Y SIDLVS I R+LRK KEK H++ K SEV+ Sbjct: 58 VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQE----KTSEVL 113 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 ED + D EL EVVR KYF MPP+T+ EA++QL++VDHDFY F N Sbjct: 114 -------PEDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLN 166 Query: 88 EETGEINIVYKRKEGGYGLIIPK 20 ++T IN++Y R GGYG+I P+ Sbjct: 167 KDTNAINVIYIRNHGGYGVIQPR 189 [40][TOP] >UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI Length = 215 Score = 114 bits (285), Expect = 5e-24 Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 1/147 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + ++RA+E +E Y SIDLV+ I R+LRK KEK K + ++ V+ Sbjct: 58 VTIYANGTVIRAQESSENLYASIDLVADKIARQLRKYKEKRQSKVNKTKTVDLIESQPVV 117 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 L D + EL EVVRTKYF MP +TV EA++QL+++DHDFY F N Sbjct: 118 ENLIG-------------DRQAELPSEVVRTKYFPMPSMTVEEALEQLQLIDHDFYMFSN 164 Query: 88 EETGEINIVYKR-KEGGYGLIIPKGNG 11 TGEIN++YKR GGYGLI P+ NG Sbjct: 165 GVTGEINVIYKRYHHGGYGLIQPRPNG 191 [41][TOP] >UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC 6803 RepID=LRTA_SYNY3 Length = 191 Score = 114 bits (284), Expect = 6e-24 Identities = 67/161 (41%), Positives = 93/161 (57%) Frame = -1 Query: 505 AAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 326 A + NK AE V V ++RA+E +E Y SIDLV+ I R+LRK KE+ Sbjct: 48 ARITNKHKAE---------VTVYANGTVIRAQEGSENLYASIDLVADKIARQLRKYKERI 98 Query: 325 TDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTV 146 D K +K SE++ E+ +E D EL EV+R KYF MPP+ + Sbjct: 99 QD-----KQHGNVKTSEIV-------EDKPVEENLIGDRAPELPSEVLRMKYFAMPPMAI 146 Query: 145 FEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23 +A++QL++VDHDFY FRN++T EIN++Y R GGYG+I P Sbjct: 147 EDALEQLQLVDHDFYMFRNKDTDEINVIYIRNHGGYGVIQP 187 [42][TOP] >UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA Length = 212 Score = 113 bits (283), Expect = 8e-24 Identities = 68/149 (45%), Positives = 91/149 (61%), Gaps = 1/149 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + ++RA+E +E Y SIDLV+ I R+LRK KEK R K K EV+ Sbjct: 58 VTIYANGTVIRAQESSENLYASIDLVADKIARQLRKYKEK-----RMAKQYQLPKTGEVV 112 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 P D+ D +L EEVVRTKYF MPP+++ EA++QL+++DHDFY FRN Sbjct: 113 AQKPIVDDLIG-------DRTVKLPEEVVRTKYFAMPPMSIQEALEQLQLIDHDFYMFRN 165 Query: 88 EETGEINIVYKRK-EGGYGLIIPKGNGEV 5 ET EIN++Y+R GGYG+I P+ NG V Sbjct: 166 AETDEINVIYQRSHHGGYGVIQPR-NGSV 193 [43][TOP] >UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7 Length = 207 Score = 112 bits (279), Expect = 2e-23 Identities = 65/146 (44%), Positives = 88/146 (60%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + ++RAEE E Y SIDLVS I R+L+K KEK D KG +L +E Sbjct: 58 VTIYANGTVIRAEECNENLYASIDLVSDKITRQLKKYKEKLRDR----KG--QLSTAETA 111 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 L G ++ + EL +++VRTKYF MP +TV +A+ QL++VDHDFY FRN Sbjct: 112 DQLSDGALVTDL----LNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRN 167 Query: 88 EETGEINIVYKRKEGGYGLIIPKGNG 11 TGEIN++Y+R GGYG+I P+ G Sbjct: 168 AATGEINVIYERNHGGYGVIQPRPEG 193 [44][TOP] >UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO Length = 199 Score = 110 bits (276), Expect = 5e-23 Identities = 61/145 (42%), Positives = 86/145 (59%), Gaps = 2/145 (1%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V ++RA+E +E Y SIDLVS I R+LRK KE+ + + Sbjct: 58 VTVYANGAVIRAQEGSENLYASIDLVSDKIARQLRKYKERRLEQKAYS------------ 105 Query: 268 LPLPSGD--EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 P+ +GD ++ +E D + EL EVVR KYF MP +++ EA++QL++VDHDFY F Sbjct: 106 -PVKTGDVVQDQPVEGNLIGDRQPELPPEVVRMKYFAMPLMSIEEALEQLQLVDHDFYMF 164 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 RN T EIN++Y R GGYG+I P+ Sbjct: 165 RNRNTNEINVIYIRNHGGYGVIQPR 189 [45][TOP] >UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus PCC 6301 RepID=Q5N179_SYNP6 Length = 207 Score = 110 bits (275), Expect = 7e-23 Identities = 64/146 (43%), Positives = 88/146 (60%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + ++RAEE E Y SIDLVS I R+L+K KE+ D KG +L +E Sbjct: 58 VTIYANGTVIRAEECNENLYASIDLVSDKITRQLKKYKEELRDR----KG--QLSTAETA 111 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 L G ++ + EL +++VRTKYF MP +TV +A+ QL++VDHDFY FRN Sbjct: 112 DQLSDGALVTDL----LNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRN 167 Query: 88 EETGEINIVYKRKEGGYGLIIPKGNG 11 TGEIN++Y+R GGYG+I P+ G Sbjct: 168 AATGEINVIYERNHGGYGVIQPRPEG 193 [46][TOP] >UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307 RepID=A5GUZ2_SYNR3 Length = 187 Score = 106 bits (265), Expect = 1e-21 Identities = 56/137 (40%), Positives = 80/137 (58%), Gaps = 5/137 (3%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 ++RA+E ++ Y SIDLV+ + R+L++ K++ HG H D Sbjct: 65 VIRAQERSQNLYASIDLVAGKLARQLQRHKDRRQGHGHH------------------SDL 106 Query: 244 EDEIEITPQKDD-----EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEET 80 + E E+ P + D EL VVR KYF MPP++V EAI QLE++DHDFY FRN + Sbjct: 107 QAEPEVMPLQGDMLQGRHAELPAPVVRRKYFAMPPMSVEEAIHQLEVIDHDFYVFRNADN 166 Query: 79 GEINIVYKRKEGGYGLI 29 GE+ +VY+R GGYG+I Sbjct: 167 GELQVVYQRNHGGYGVI 183 [47][TOP] >UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group RepID=C6YXL0_ORYSJ Length = 321 Score = 105 bits (263), Expect = 2e-21 Identities = 63/144 (43%), Positives = 92/144 (63%), Gaps = 6/144 (4%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 ++RAEE AE+TY SIDL SSII+RKLRKIKEKETD RH+KG + S+ L ++ Sbjct: 149 VIRAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKG-TKPPVSDWPPSLLDNND 206 Query: 244 ED------EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 83 +D ++E +DE+ ++ VVRTK F+MPPL+ EA++QL DH F+A + Sbjct: 207 DDAQAQLKDLEEAVGAEDEDTVLTRVVRTKVFEMPPLSGEEAMEQLGNGDHTFHALPRRK 266 Query: 82 TGEINIVYKRKEGGYGLIIPKGNG 11 G +++ G +G I+P+G+G Sbjct: 267 NGGDEPPVQKEGGRFGPIVPQGDG 290 [48][TOP] >UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IMZ9_9CHRO Length = 195 Score = 105 bits (261), Expect = 3e-21 Identities = 59/139 (42%), Positives = 81/139 (58%), Gaps = 4/139 (2%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE----VILPLP 257 ++RA+EH++ Y SIDLV+S + R+L + KE+ H RH +R E LP P Sbjct: 65 VIRAQEHSDNLYASIDLVASKLTRQLNRYKERV--HERHQGPVHRSARDEEAGAASLPPP 122 Query: 256 SGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG 77 D E EL VR KYF MPP+++ EA+ QLE++DHDFY FR E+G Sbjct: 123 GSSLTD--------GKEPELPSRGVRRKYFAMPPMSLDEALHQLELIDHDFYVFREAESG 174 Query: 76 EINIVYKRKEGGYGLIIPK 20 +I +VY R GG+G+I PK Sbjct: 175 QIQVVYHRNHGGFGVIQPK 193 [49][TOP] >UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805 RepID=A4CWK2_SYNPV Length = 195 Score = 104 bits (260), Expect = 4e-21 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 1/145 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V ++RA+E +E Y SIDLV+S + R+LR+ K++ +DH H G K SE Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVASKLARQLRRYKDRHSDH-HHSHGH---KASET- 111 Query: 268 LPLPSGDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 P ++E + D +E +L VR KYF MPP+T+ +A QL+++DHDFY FR Sbjct: 112 -PTTEAVLDNEAVVESLLDGKEVQLPSPGVRRKYFAMPPMTLEQARQQLDLIDHDFYVFR 170 Query: 91 NEETGEINIVYKRKEGGYGLIIPKG 17 + ++GE+ ++Y R GGYG+I +G Sbjct: 171 DSDSGELQVIYHRNHGGYGVIEARG 195 [50][TOP] >UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1 Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9 Length = 195 Score = 104 bits (259), Expect = 5e-21 Identities = 55/140 (39%), Positives = 83/140 (59%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V ++RA+E +E Y SIDLV + R+LRK KE+ DH H G + + + Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHGHS----ASLT 111 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 +E +E + E +L E VR KYF MPP+T+ +A QL+++DHDFY FR+ Sbjct: 112 PSTEEVSDESAVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFRD 171 Query: 88 EETGEINIVYKRKEGGYGLI 29 +TG++ ++Y+R GGYG+I Sbjct: 172 SKTGDLQVIYRRNHGGYGVI 191 [51][TOP] >UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. MIT 9515 RepID=A2BV60_PROM5 Length = 194 Score = 104 bits (259), Expect = 5e-21 Identities = 57/144 (39%), Positives = 85/144 (59%), Gaps = 1/144 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + ++RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F+ Sbjct: 57 VTIFASGTIIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHYKNLNYNLEKNKHSFTN-- 114 Query: 268 LPLPSGDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 + + D I+ D E +L E ++ KYF+M P+++ EA QL+++DHDFY FR Sbjct: 115 ----TNEHLDSIDKNIFNDKREAKLPEPSIKNKYFEMIPISLEEARKQLDLIDHDFYVFR 170 Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20 N++ E+ ++YKRK GGYGLI K Sbjct: 171 NKKNNELQVIYKRKHGGYGLIQSK 194 [52][TOP] >UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. AS9601 RepID=A2BPM8_PROMS Length = 194 Score = 103 bits (257), Expect = 8e-21 Identities = 57/145 (39%), Positives = 84/145 (57%), Gaps = 2/145 (1%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSE 275 V + ++RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L Sbjct: 57 VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL---- 112 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 P+ S + + ++ E L E ++ KYF+M P++ EA QL+++DHDFY F Sbjct: 113 ---PIESMESNFLDKALFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVF 169 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 RN++ E+ ++YKR GGYGLI K Sbjct: 170 RNKKNNELQVIYKRNHGGYGLIQSK 194 [53][TOP] >UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp. CC9311 RepID=Q0ICJ8_SYNS3 Length = 191 Score = 103 bits (256), Expect = 1e-20 Identities = 57/140 (40%), Positives = 86/140 (61%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V ++RA+E +E Y SIDLV+S + R+LR+ KE+ +DHG H P ++V+ Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVASKLARQLRRFKERHSDHG-HRTTPTAA--NDVL 113 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 L E E + + E +L VR KYF MP +++ EA QLE++DHDFY FR+ Sbjct: 114 LT------ERPTEDSLLEGKEAQLPSPGVRRKYFAMPAMSLEEARHQLELIDHDFYLFRD 167 Query: 88 EETGEINIVYKRKEGGYGLI 29 +E+GE+ ++Y R GG+G+I Sbjct: 168 KESGELQVIYHRNHGGFGVI 187 [54][TOP] >UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803 RepID=A5GJ89_SYNPW Length = 195 Score = 103 bits (256), Expect = 1e-20 Identities = 56/141 (39%), Positives = 86/141 (60%), Gaps = 1/141 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V ++RA+E +E Y SIDLV+S + R+LR+ K++ +DH H G + SE Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVASKLARQLRRFKDRHSDH-HHSHGH---RASET- 111 Query: 268 LPLPSGDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 P +DE + D +E +L VR KYF MPP+T+ +A QL+++DHDFY FR Sbjct: 112 -PTTESVLDDEAIVESLLDGKEVQLPSPGVRRKYFSMPPMTLEQARQQLDLIDHDFYLFR 170 Query: 91 NEETGEINIVYKRKEGGYGLI 29 + +G++ ++Y+R GGYG+I Sbjct: 171 DSASGDLQVIYRRNHGGYGVI 191 [55][TOP] >UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. MIT 9301 RepID=A3PBB8_PROM0 Length = 194 Score = 103 bits (256), Expect = 1e-20 Identities = 57/145 (39%), Positives = 84/145 (57%), Gaps = 2/145 (1%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSE 275 V + ++RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L Sbjct: 57 VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL---- 112 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 P+ S + + ++ E L E ++ KYF+M P++ EA QL+++DHDFY F Sbjct: 113 ---PIESMESNFLDKAFFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVF 169 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 RN++ E+ ++YKR GGYGLI K Sbjct: 170 RNKKNNELQVIYKRNHGGYGLIQSK 194 [56][TOP] >UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP Length = 194 Score = 101 bits (252), Expect = 3e-20 Identities = 57/144 (39%), Positives = 82/144 (56%), Gaps = 1/144 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + ++RAEE E Y SIDLVS+ + RKLRK KE+ + N+ +S I Sbjct: 57 VTIFANGTIIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHNKKLHNNLVKNKNSYSNAI 116 Query: 268 LPLPSGDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 +E D I+ ++ E L E ++ KYF+M P+++ EA QL+ +DHDFY FR Sbjct: 117 ------EESDSIDKDIFNEEREVRLPEPSIKKKYFEMIPISLEEARKQLDFIDHDFYLFR 170 Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20 N+ E+ ++YKR GGYGLI K Sbjct: 171 NKLNNELQVIYKRNHGGYGLIQSK 194 [57][TOP] >UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. MIT 9303 RepID=A2CBL6_PROM3 Length = 195 Score = 101 bits (252), Expect = 3e-20 Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 2/142 (1%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSE 275 V V ++RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H G + +E Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTPTTE 115 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ++ +E I+ + E L VR KYF MPP++V +A QL+++DHDFY F Sbjct: 116 AVI------DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARHQLDLIDHDFYLF 169 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 R +E+G++ ++Y+R GGYG+I Sbjct: 170 REQESGQLQVIYRRNHGGYGVI 191 [58][TOP] >UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus str. MIT 9313 RepID=Q7V8W0_PROMM Length = 195 Score = 100 bits (250), Expect = 5e-20 Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 2/142 (1%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSE 275 V V ++RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H G + +E Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTPTTE 115 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ++ +E I+ + E L VR KYF MPP++V +A QL+++DHDFY F Sbjct: 116 AVI------DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARYQLDLIDHDFYLF 169 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 R +E+G++ ++Y+R GGYG+I Sbjct: 170 REQESGQLQVIYRRNHGGYGVI 191 [59][TOP] >UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102 RepID=Q7U8F3_SYNPX Length = 195 Score = 100 bits (250), Expect = 5e-20 Identities = 51/145 (35%), Positives = 89/145 (61%), Gaps = 1/145 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEV 272 V V ++RA+E +E Y SIDL +S + R+LR+ KE+ +DH H + +E Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLAASKLARQLRRWKERHSDHHHSHGHSASTTPATEA 116 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 + ++ +++ + + E EL + VR KYF MPP+++ EA QL+++DHDFY FR Sbjct: 117 VT------DDSQVDGSLLQGREAELPDPGVRRKYFAMPPMSLEEARRQLDLIDHDFYLFR 170 Query: 91 NEETGEINIVYKRKEGGYGLIIPKG 17 ++++ ++ ++Y+R GGYG+I +G Sbjct: 171 DKDSDQLQVIYRRNHGGYGVIQARG 195 [60][TOP] >UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1 Tax=Prochlorococcus marinus str. MIT 9312 RepID=Q31CD8_PROM9 Length = 194 Score = 100 bits (250), Expect = 5e-20 Identities = 56/143 (39%), Positives = 80/143 (55%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + ++RAEE E Y SIDLVS+ + RKLRK KE+ + N F Sbjct: 57 VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNYKTNYINQFKNNESF---- 112 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 P+ S D + ++ E L E ++ KYF+M P++ EA QL+++DHDFY FRN Sbjct: 113 -PIESADSNVLDKTLFKQGREASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRN 171 Query: 88 EETGEINIVYKRKEGGYGLIIPK 20 ++ E+ ++YKR GGYGLI K Sbjct: 172 KKNNELQVIYKRNHGGYGLIQSK 194 [61][TOP] >UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE Length = 195 Score = 100 bits (250), Expect = 5e-20 Identities = 54/140 (38%), Positives = 81/140 (57%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V ++RA+E +E Y SIDLV + R+LRK KE+ DH H G + + + Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHGHS----ASLT 111 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 +E +E + E +L E VR KYF MPP+T+ +A QL+++DHDFY F++ Sbjct: 112 PSTEEVSDESVVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFKD 171 Query: 88 EETGEINIVYKRKEGGYGLI 29 TG + ++Y+R GGYG+I Sbjct: 172 SATGALQVIYRRNHGGYGVI 191 [62][TOP] >UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. RS9917 RepID=A3ZA02_9SYNE Length = 195 Score = 100 bits (249), Expect = 7e-20 Identities = 54/140 (38%), Positives = 85/140 (60%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V ++RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H +R + Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVASKLCRQLRRFKERHSDH--HHSNGHRASETP-- 112 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 P + + I+ + E +L + VR KYF MPP+++ EA QL+++DHDFY FR+ Sbjct: 113 -PTDAIADAAPIDGSLLDGKEVQLPDPGVRRKYFAMPPMSLEEARHQLDVIDHDFYLFRD 171 Query: 88 EETGEINIVYKRKEGGYGLI 29 TG++ ++Y+R GGYG+I Sbjct: 172 ASTGDLQVIYRRNHGGYGVI 191 [63][TOP] >UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured Prochlorococcus marinus clone ASNC2259 RepID=Q1PKX8_PROMA Length = 194 Score = 100 bits (248), Expect = 9e-20 Identities = 56/145 (38%), Positives = 83/145 (57%), Gaps = 2/145 (1%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSE 275 V + ++RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L Sbjct: 57 VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL---- 112 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 P+ S + + + E L + ++ KYF+M P++ EA QL+++DHDFY F Sbjct: 113 ---PIESMESNFLDKAFFIEGTEASLPKPSIKNKYFEMTPISSDEARKQLDLIDHDFYVF 169 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 RN++ E+ ++YKR GGYGLI K Sbjct: 170 RNKKNNELQVIYKRNHGGYGLIQSK 194 [64][TOP] >UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT 9202 RepID=B9P0E9_PROMA Length = 194 Score = 100 bits (248), Expect = 9e-20 Identities = 57/145 (39%), Positives = 79/145 (54%), Gaps = 2/145 (1%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + ++RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F Sbjct: 57 VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF---- 112 Query: 268 LPLPSGDEEDEI--EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 P D E E + E L E ++ KYF+M P++ EA QL+++DHDFY F Sbjct: 113 ---PIADTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVF 169 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 RN + E+ ++YKR GGYGLI K Sbjct: 170 RNSKNNELQVIYKRNHGGYGLIQSK 194 [65][TOP] >UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus marinus clone HF10-88F10 RepID=Q1PJW9_PROMA Length = 194 Score = 99.4 bits (246), Expect = 2e-19 Identities = 59/147 (40%), Positives = 83/147 (56%), Gaps = 4/147 (2%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSE 275 V + ++RAEE E Y SIDLVS+ + RKLRK KE+ +T H K N+ F Sbjct: 57 VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNNQFK--NKESF-- 112 Query: 274 VILPLPSGDEEDEI--EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 101 PS + E E + E L E ++ KYF+M P++ EA QL+++DHDFY Sbjct: 113 -----PSENTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFY 167 Query: 100 AFRNEETGEINIVYKRKEGGYGLIIPK 20 FRN++ ++ ++YKR GGYGLI K Sbjct: 168 VFRNKKNNQLQVIYKRNHGGYGLIQSK 194 [66][TOP] >UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC Length = 195 Score = 99.0 bits (245), Expect = 2e-19 Identities = 51/141 (36%), Positives = 84/141 (59%), Gaps = 1/141 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEV 272 V V ++RA+E +E Y SIDL + + R+LR+ KE+ +DH H + ++V Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPSTDV 116 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 + ++ +E + + E EL + VR KYF MPP+ + EA QL+++DHDFY FR Sbjct: 117 V------NDASPVEASLLQGREAELPDPGVRRKYFAMPPMGLEEARRQLDLIDHDFYLFR 170 Query: 91 NEETGEINIVYKRKEGGYGLI 29 +E+ ++ ++Y+R GGYG+I Sbjct: 171 EKESDQLQVIYRRNHGGYGVI 191 [67][TOP] >UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str. MIT 9215 RepID=A8G3B2_PROM2 Length = 194 Score = 99.0 bits (245), Expect = 2e-19 Identities = 57/144 (39%), Positives = 81/144 (56%), Gaps = 1/144 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + ++RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F Sbjct: 57 VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF---- 112 Query: 268 LPLPSGDEEDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 L + E ++ KD E L E ++ KYF+M P++ EA QL+++DHDFY FR Sbjct: 113 --LIADTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFR 170 Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20 N + E+ ++YKR GGYGLI K Sbjct: 171 NNKNNELQVIYKRNHGGYGLIQSK 194 [68][TOP] >UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. NATL1A RepID=A2C0K6_PROM1 Length = 194 Score = 99.0 bits (245), Expect = 2e-19 Identities = 54/143 (37%), Positives = 79/143 (55%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V ++RA+E +E Y SIDLV++ + R+LRK KE+ H H + +E I Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHNNQSTKSVQNEKI 116 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 S D + + E L VR KYF+M P+T+ +A QL+++DHDFY FR Sbjct: 117 ENFSSSDH------SLIEGKEPHLPNPGVRRKYFEMDPMTIEQARVQLDLIDHDFYLFRE 170 Query: 88 EETGEINIVYKRKEGGYGLIIPK 20 EE + ++Y+R GGYG+I K Sbjct: 171 EEGSALRVIYRRNHGGYGVIQEK 193 [69][TOP] >UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916 RepID=Q05SE1_9SYNE Length = 195 Score = 98.2 bits (243), Expect = 3e-19 Identities = 51/141 (36%), Positives = 84/141 (59%), Gaps = 1/141 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEV 272 V V ++RA+E +E Y SIDLV++ + R+LR+ KE+ +DH H + +E Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVANKLSRQLRRYKERHSDHHHSHGHRASTTPTTEA 116 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 +L ++ ++ + E L + VR KYF MPP++V EA QL+++DHDF+ FR Sbjct: 117 VL------DDSAVDGSLLDGKEAHLPDPGVRRKYFPMPPMSVEEARHQLDLIDHDFFLFR 170 Query: 91 NEETGEINIVYKRKEGGYGLI 29 + + E+ ++Y+R GGYG+I Sbjct: 171 DASSKELQVIYRRNHGGYGVI 191 [70][TOP] >UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YVD7_9SYNE Length = 195 Score = 98.2 bits (243), Expect = 3e-19 Identities = 58/164 (35%), Positives = 90/164 (54%), Gaps = 6/164 (3%) Frame = -1 Query: 493 NKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG 314 N VA+ E V V +++RA+E +E Y SID+V+ + R+LR+ K++ ++H Sbjct: 47 NPRVAQQTAE-----VTVFANGVVIRAQERSENLYASIDMVAGKLSRQLRRYKDRLSNH- 100 Query: 313 RHMKGPNRLKFSEVILPLPSGDEEDEIE---ITPQK---DDEEELIEEVVRTKYFDMPPL 152 H G P GD+ ++ + P D E L VR KYF MP + Sbjct: 101 -HGAGS----------PANVGDDTEQPSLEGVLPNDLIGDREPALPVPAVRRKYFSMPAM 149 Query: 151 TVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20 ++ +A+ QLE++DHDFY FR E +G + +VY+R GG+G+I PK Sbjct: 150 SLDQALHQLELIDHDFYVFREESSGGLQVVYRRNHGGFGVIQPK 193 [71][TOP] >UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO Length = 284 Score = 98.2 bits (243), Expect = 3e-19 Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 2/144 (1%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMKGPNRLKFSEV 272 V V ++R+EE A+ Y SID VS ++RKLRK+KEK+ + +H K + + + Sbjct: 142 VTVYTRNGIIRSEEEADDLYASIDAVSDKLERKLRKVKEKKISKRPKHNKNAPKAQTDAI 201 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 + + + DE DE +EVVR K+ + TV+EA +++E + H F+AFR Sbjct: 202 VEEMQAADE--------ALADESMDYDEVVREKFHPVRKCTVYEAAEEMENLGHTFFAFR 253 Query: 91 NEETG-EINIVYKRKEGGYGLIIP 23 N G E+N+VYKR GGYG+I+P Sbjct: 254 NVAQGNEVNVVYKRDAGGYGVIVP 277 [72][TOP] >UniRef100_Q8XIE9 30S ribosomal protein S30AE family n=1 Tax=Clostridium perfringens RepID=Q8XIE9_CLOPE Length = 179 Score = 97.8 bits (242), Expect = 4e-19 Identities = 56/149 (37%), Positives = 88/149 (59%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V +++ IL+R EE + Y SIDLV I+R++RK K + + R+ + L+F+ Sbjct: 50 VEIMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150 Query: 94 RNEETGEINIVYKRKEGGYGLIIPKGNGE 8 ++ ET ++N+VYKRK+G YGLI P G GE Sbjct: 151 QDPETNQLNVVYKRKDGNYGLIEP-GLGE 178 [73][TOP] >UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Prochlorococcus marinus str. NATL2A RepID=Q46H11_PROMT Length = 194 Score = 97.8 bits (242), Expect = 4e-19 Identities = 55/143 (38%), Positives = 78/143 (54%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V ++RA+E +E Y SIDLV++ + R+LRK KE+ H H + +E Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHHNQSTKSVQNEDT 116 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 S D +T K E L VR KYF+M P+ + +A QL+++DHDFY FR Sbjct: 117 QNFSSSDHS----LTEGK--EPHLPSPGVRRKYFEMTPMNIEQARVQLDLIDHDFYLFRE 170 Query: 88 EETGEINIVYKRKEGGYGLIIPK 20 EE + ++YKR GGYG+I K Sbjct: 171 EEGSALRVIYKRNHGGYGVIQEK 193 [74][TOP] >UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=A9BE19_PROM4 Length = 197 Score = 97.8 bits (242), Expect = 4e-19 Identities = 54/144 (37%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V ++RA+E ++ Y SIDLV++ + R+LRK KE+ +DH H G S + Sbjct: 57 VTVFANGTVIRAQERSQNLYASIDLVATKLCRQLRKYKERHSDH-HHSHG-----HSASL 110 Query: 268 LPLPSGDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 P ED+ I+ + + E L +R KYF MPP++ +A QL+++DHDFY F+ Sbjct: 111 TPTTEAVVEDKAIDSSLIQGKEAHLPTPGIRRKYFSMPPMSTEQARHQLDLIDHDFYMFK 170 Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20 ET ++ ++Y+R GGYG+I K Sbjct: 171 EIETQQLQVIYRRTHGGYGIIQAK 194 [75][TOP] >UniRef100_Q0TND9 Ribosomal subunit interface protein n=6 Tax=Clostridium perfringens RepID=Q0TND9_CLOP1 Length = 179 Score = 97.8 bits (242), Expect = 4e-19 Identities = 56/149 (37%), Positives = 88/149 (59%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V++ IL+R EE + Y SIDLV I+R++RK K + + R+ + L+F+ Sbjct: 50 IEVMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150 Query: 94 RNEETGEINIVYKRKEGGYGLIIPKGNGE 8 ++ ET ++N+VYKRK+G YGLI P G GE Sbjct: 151 QDPETNQLNVVYKRKDGNYGLIEP-GLGE 178 [76][TOP] >UniRef100_Q0SR10 Ribosomal subunit interface protein n=1 Tax=Clostridium perfringens SM101 RepID=Q0SR10_CLOPS Length = 179 Score = 97.4 bits (241), Expect = 6e-19 Identities = 54/144 (37%), Positives = 85/144 (59%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V++ IL+R EE + Y SIDLV I+R++RK K + + R+ + L+F+ Sbjct: 50 VEVMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150 Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23 ++ ET ++N+VYKRK+G YGLI P Sbjct: 151 QDPETNQLNVVYKRKDGNYGLIEP 174 [77][TOP] >UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109 RepID=D0CH01_9SYNE Length = 195 Score = 97.4 bits (241), Expect = 6e-19 Identities = 50/141 (35%), Positives = 84/141 (59%), Gaps = 1/141 (0%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEV 272 V V ++RA+E +E Y SIDL + + R+LR+ KE+ +DH H + ++V Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPSTDV 116 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 + ++ +E + + E EL + VR KYF MPP+ + +A QL+++DHDFY FR Sbjct: 117 V------NDASPVESSLLQGREAELPDPGVRRKYFAMPPMGLEDARRQLDLIDHDFYLFR 170 Query: 91 NEETGEINIVYKRKEGGYGLI 29 +E+ ++ ++Y+R GGYG+I Sbjct: 171 EKESDQLQVIYRRNHGGYGVI 191 [78][TOP] >UniRef100_Q5KV92 Ribosomal protein S30EA n=1 Tax=Geobacillus kaustophilus RepID=Q5KV92_GEOKA Length = 183 Score = 95.5 bits (236), Expect = 2e-18 Identities = 56/142 (39%), Positives = 86/142 (60%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + + +L+RAEE E Y +IDLV+ ++R++RK K K + K +R K ++ Sbjct: 53 IEVTIPMPHLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKEAK 107 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + P+PSG E ++EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F Sbjct: 108 LAAPVPSGASAAE-------NNEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 158 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 N ET NIVY+RK+G YGLI Sbjct: 159 TNAETNRTNIVYRRKDGKYGLI 180 [79][TOP] >UniRef100_A7NNI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NNI5_ROSCS Length = 198 Score = 95.5 bits (236), Expect = 2e-18 Identities = 51/144 (35%), Positives = 84/144 (58%) Frame = -1 Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272 V VV +LVRAE A Y +ID V +QR++ + K+K GR R + ++ Sbjct: 62 VTVVGDHGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDKHWRRGRL-----RRQGGQI 116 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 + LP + P DEEE +VRTK F + P+ EA++Q+E++ H F+ F+ Sbjct: 117 VEALPEMNAA-----APAPIDEEEQRPRIVRTKEFQVKPMYSDEAVEQMELLGHSFFIFQ 171 Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20 + +TG++N++Y+R++G YGLI+P+ Sbjct: 172 DADTGKLNVLYRRQDGNYGLIVPE 195 [80][TOP] >UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2X0_ABIDE Length = 175 Score = 95.5 bits (236), Expect = 2e-18 Identities = 56/145 (38%), Positives = 81/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V V V+ ++RAE+ ++ Y SIDL+ II+R+LR+ K K D + F+ Sbjct: 50 VEVTVPVKGHIIRAEQVSDDMYVSIDLIEDIIERQLRRYKTKIVDSKQSASN-----FTS 104 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + Q DD E+ +V+RTK F + P+ EA Q+E+++H FY F Sbjct: 105 AFM---------------QDDDYEDEDVKVIRTKRFAVKPMDPEEACVQMELLNHSFYVF 149 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 RN ET E+N+VYKRK G YGLI P+ Sbjct: 150 RNAETDEVNVVYKRKNGDYGLIEPE 174 [81][TOP] >UniRef100_B9NGT0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NGT0_POPTR Length = 71 Score = 94.7 bits (234), Expect = 4e-18 Identities = 45/54 (83%), Positives = 47/54 (87%) Frame = -1 Query: 163 MPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGNGEVD 2 MPPLTV EAI+QLE VDHDFY FRNEETGEINIVYKRK GGYG IIPKGN E + Sbjct: 1 MPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYKRKAGGYGPIIPKGNYEAE 54 [82][TOP] >UniRef100_Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1IYK5_DEIGD Length = 186 Score = 94.4 bits (233), Expect = 5e-18 Identities = 54/144 (37%), Positives = 78/144 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + V ++RAEEH Y +ID S +++R+LRK K K H + P Sbjct: 56 VEVQLNVPNGIIRAEEHHADMYAAIDRASDVLERQLRKFKTKYLRHRQEAAPP------- 108 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 P P E D D+ E E+VRTK FD+ P++ +A+ Q+E + HDFY F Sbjct: 109 ---PQPGLAEAD----VNAGLDDTEFRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYVF 161 Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23 +N +TG +VY+R++G YGLI P Sbjct: 162 KNMDTGGCAVVYRRRDGHYGLIEP 185 [83][TOP] >UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus RepID=Q7VDH9_PROMA Length = 195 Score = 94.0 bits (232), Expect = 6e-18 Identities = 52/146 (35%), Positives = 86/146 (58%), Gaps = 3/146 (2%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS--- 278 V V ++RA+E ++ Y SIDLVS+ + R+LR+ KE+ +DH H +R + Sbjct: 57 VTVFANGTVIRAQERSQNLYASIDLVSNKLCRQLRRYKERHSDH--HHSPGHRASITPTT 114 Query: 277 EVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98 E +L E+ I + + E +L + +R KYF M P+ + +A QL+++DHDFY Sbjct: 115 EEVL------EDKSINGSLVEGKEAKLPKPGIRRKYFPMHPMNIEQAQHQLDLIDHDFYL 168 Query: 97 FRNEETGEINIVYKRKEGGYGLIIPK 20 F+ E+ ++ ++Y+RK GGYG+I K Sbjct: 169 FKEAESEQLQVIYRRKNGGYGVIQAK 194 [84][TOP] >UniRef100_B8BRE6 Light-repressed protein a n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRE6_THAPS Length = 198 Score = 94.0 bits (232), Expect = 6e-18 Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 2/145 (1%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFSE 275 VV ++ R E + Y SIDLV++ + RKLRK KE+ D HG G N +E Sbjct: 62 VVTTLKGTTFRVAESSPDMYASIDLVAARLARKLRKYKERRLDGYHGGPNMGEN---IAE 118 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 V+ + + ED E D ++ ++ +V T P+++ EAI L+ +DHDFY F Sbjct: 119 VLNAIEVDESEDGAEEESYIDPDQAVVTKVKST------PISIKEAIFALDYIDHDFYVF 172 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 R+EET E+++VYKR GG GLI P+ Sbjct: 173 RDEETNEVSVVYKRNAGGVGLIQPE 197 [85][TOP] >UniRef100_Q1AVJ5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ5_RUBXD Length = 189 Score = 93.6 bits (231), Expect = 8e-18 Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 14/171 (8%) Frame = -1 Query: 493 NKLVAEAAVESI----PVVVVVEVEKI-------LVRAEEHAETTYGSIDLVSSIIQRKL 347 ++ VA A VE I P + EV + +++A E +E Y SID +S ++R++ Sbjct: 34 DRSVARAEVELIHERNPSIAASEVAETTLFINGAVLKAREASEDMYASIDRMSDKLERQV 93 Query: 346 RKIKEKETD--HGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIE-EVVRT 176 ++ + ++ D HGR LK E E P +EEE IE +VRT Sbjct: 94 KRYRGRQVDRWHGR-------LK----------NHEGARAEPQPFVAEEEEDIEPRIVRT 136 Query: 175 KYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23 K F M P++ EA+ Q+E++DHDF+ F N +TG+IN+VY+R++G YGLI P Sbjct: 137 KQFQMKPMSAEEAVLQMELLDHDFFVFTNADTGDINVVYRRRDGNYGLIEP 187 [86][TOP] >UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH Length = 178 Score = 93.6 bits (231), Expect = 8e-18 Identities = 55/145 (37%), Positives = 80/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + ++ +VRAE+ + Y SIDLV +I+R+L+K K K D + N F + Sbjct: 50 IEVTIPMKGNIVRAEQVSNDMYASIDLVEEVIERQLKKYKSKLKDMNQSAANFNPSFFED 109 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 V+ ED DEE++ + R K F M P+ EA Q+E++ H+FY F Sbjct: 110 VL-------NEDS--------DEEDI--NITRVKRFAMKPMDAEEACVQMELLGHNFYVF 152 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 RN ET E+N+VYKRK YGLI P+ Sbjct: 153 RNAETDEVNVVYKRKGNSYGLIEPE 177 [87][TOP] >UniRef100_C6D4V5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D4V5_PAESJ Length = 182 Score = 93.2 bits (230), Expect = 1e-17 Identities = 62/180 (34%), Positives = 98/180 (54%), Gaps = 9/180 (5%) Frame = -1 Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIP---------VVVVVEVEKILVRAEEHAETTY 389 T A++ VK+++ + A A+ ++ V V + + +++RAE+ +E Y Sbjct: 13 TEALREYAVKKISRLEKYFEAPASETTVTLSVTKGKHAVEVTIPLVGVMLRAEDKSEDMY 72 Query: 388 GSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDD 209 SID+V ++R++RK K K RH G L F E G + + + D+ Sbjct: 73 SSIDVVVDKLERQIRKHKTKMNRKFRHESGVKAL-FKE-------GLSQTAVSVM---DE 121 Query: 208 EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29 E+EL E+VRTK F + P+ V EAI Q+ MV H+F+ F N + E+N+VYKR +G YGLI Sbjct: 122 EDEL--ELVRTKRFMLKPMDVEEAILQMNMVGHNFFVFSNIDNKEVNVVYKRSDGKYGLI 179 [88][TOP] >UniRef100_C4L5L1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L5L1_EXISA Length = 187 Score = 93.2 bits (230), Expect = 1e-17 Identities = 57/149 (38%), Positives = 82/149 (55%) Frame = -1 Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287 E V V + + +L+RAE+ Y +IDLV ++R++RK K K GR +G Sbjct: 49 EKQKVEVTIPMPNLLLRAEDINLDMYAAIDLVVDKLERQIRKHKTKLNRKGRGKEGG--- 105 Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107 E L D+ TP DE+E E+VRTK F + P+ EAI Q++M+ H Sbjct: 106 -VGEYFKSLEGPDD------TPAVYDEDEAELELVRTKRFTLKPMDTEEAILQMDMLGHS 158 Query: 106 FYAFRNEETGEINIVYKRKEGGYGLIIPK 20 F+ F + ETG N+VY+RK+G YGLI P+ Sbjct: 159 FFVFSDAETGNTNVVYRRKDGKYGLIEPE 187 [89][TOP] >UniRef100_A7GUW3 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GUW3_BACCN Length = 179 Score = 93.2 bits (230), Expect = 1e-17 Identities = 63/145 (43%), Positives = 83/145 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +L+RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 50 VEVTIPFTDLLLRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSAKTAF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP G EE + E+EL E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILPDQLGQEEVQ---------EDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 154 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E NIVY RK+G YGLI K Sbjct: 155 TNADTNETNIVYGRKDGKYGLIEAK 179 [90][TOP] >UniRef100_C8W7H2 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W7H2_ATOPD Length = 196 Score = 93.2 bits (230), Expect = 1e-17 Identities = 55/143 (38%), Positives = 78/143 (54%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V V +VR ++ Y +ID + + R+LRK K K + HMK SE Sbjct: 59 VTVFVRNNVVRVTASSDDMYAAIDEAADKVSRQLRKYKTKVVERRHHMK-------SERG 111 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 + L D + IEI E+L +++VR KY D+ P+T EA+ Q +++ HDFY F N Sbjct: 112 IALTQEDLANLIEIPA-----EDLDDQLVREKYVDLEPMTEEEALVQTDLLGHDFYVFVN 166 Query: 88 EETGEINIVYKRKEGGYGLIIPK 20 TG N++Y RK GGYG+I PK Sbjct: 167 SSTGLTNVIYHRKNGGYGIIKPK 189 [91][TOP] >UniRef100_C2D8Z3 Possible ribosome-associated inhibitor A n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8Z3_9ACTN Length = 192 Score = 93.2 bits (230), Expect = 1e-17 Identities = 55/143 (38%), Positives = 73/143 (51%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V V V +VR E +E Y +ID S + R+LRK K + D + + P Sbjct: 59 VTVYVRNNVVRVEASSEDMYAAIDAASDKVTRQLRKYKTRIIDRKQRSQAP--------- 109 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 P PS D D I+ D +VR KY D+ P+T EA+ Q +++ HDFY F N Sbjct: 110 APAPSKDLSDLIDEVADDD-------MLVREKYIDLHPMTEEEALVQTDLIGHDFYVFEN 162 Query: 88 EETGEINIVYKRKEGGYGLIIPK 20 TG IN+VY R GGYG+I PK Sbjct: 163 ATTGLINVVYHRHNGGYGIIKPK 185 [92][TOP] >UniRef100_A8S366 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S366_9CLOT Length = 187 Score = 93.2 bits (230), Expect = 1e-17 Identities = 56/145 (38%), Positives = 85/145 (58%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ +RAEE + Y SIDLV II+R++R+ ++K D K + FS+ Sbjct: 61 IEVTIPVKGNTIRAEESSTDMYVSIDLVEEIIERQIRRYRKKLID-----KKQAAISFSQ 115 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + +EEDE++ DDE + +V+TK F + P EA Q+EM+ H+FY F Sbjct: 116 AFI-----EEEDEVQ-----DDEIQ----IVKTKKFAIKPTIPEEACLQMEMLGHNFYVF 161 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T ++N+VYKRK G YGLI P+ Sbjct: 162 LNADTDQVNVVYKRKNGTYGLIEPE 186 [93][TOP] >UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7Y1_9CLOT Length = 187 Score = 92.8 bits (229), Expect = 1e-17 Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 1/162 (0%) Frame = -1 Query: 511 EVAAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 332 EV V+ A+ +E V ++ + ++RAE+ E Y +ID+V + ++LR+ K Sbjct: 42 EVKVTVSARKAKQKIE----VTIIPINGPIIRAEDSEENLYAAIDVVYDKLNKQLRRYKN 97 Query: 331 KETDHGRHM-KGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPP 155 K G++ KG ++F + E KD E +++ E R K FDM P Sbjct: 98 KLK--GKYQSKGQESIRFQNI-----------EDNAAEDKDGEFDIVIE--RHKKFDMKP 142 Query: 154 LTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29 ++ EA+ Q+E+V HDFY FRN +T EI+IVY+R+ GGYGLI Sbjct: 143 MSPEEAVLQMELVGHDFYMFRNIDTDEISIVYRRETGGYGLI 184 [94][TOP] >UniRef100_C5EVT1 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVT1_9FIRM Length = 187 Score = 92.4 bits (228), Expect = 2e-17 Identities = 55/145 (37%), Positives = 84/145 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ +RAEE + Y SIDLV +I+R++R+ ++K D K + FS+ Sbjct: 61 IEVTIPVKGNTIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAAISFSQ 115 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + +EEDE++ DDE + +V+TK F + P EA Q+EM+ H FY F Sbjct: 116 AFI-----EEEDEVQ-----DDEIQ----IVKTKKFAIKPTIPEEACLQMEMLGHSFYVF 161 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T ++N+VYKRK G YGLI P+ Sbjct: 162 LNADTDQVNVVYKRKNGTYGLIEPE 186 [95][TOP] >UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N7A9_9CHLO Length = 245 Score = 92.4 bits (228), Expect = 2e-17 Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 5/147 (3%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH--GRHMKGPNRLKFSE 275 V V +VR+EE A+ Y SID VS I+RKLRKIKEK+ G+ P + + ++ Sbjct: 105 VTVYTRNGVVRSEEEADNLYASIDAVSDKIERKLRKIKEKKNSKKAGKTKANP-KAQTAD 163 Query: 274 VILPLPSGDE--EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 101 ++ DE DEIE EE V KY + T EA +++E + H FY Sbjct: 164 IVAAAAEADEARADEIE-----------FEETVGVKYMAVKTSTAMEAAEEMESLGHVFY 212 Query: 100 AFRNEET-GEINIVYKRKEGGYGLIIP 23 AF+N+ GE+N+VYKR GGY +++P Sbjct: 213 AFKNKANGGEVNVVYKRDAGGYAVLVP 239 [96][TOP] >UniRef100_Q04E96 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Oenococcus oeni PSU-1 RepID=Q04E96_OENOB Length = 190 Score = 92.0 bits (227), Expect = 2e-17 Identities = 52/146 (35%), Positives = 84/146 (57%) Frame = -1 Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287 ++ + V + + + +RAEE Y ++DLVS+ + R++RK K + R +G + Sbjct: 50 KTFKIEVTIPLPYLTLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGI 108 Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107 F+E I P+PS ED+ K D V+R K + P+ + EA+ Q+EM+DHD Sbjct: 109 DFNEAIDPVPSDTNEDK------KID-------VIRRKNLSLKPMDIEEAVLQMEMLDHD 155 Query: 106 FYAFRNEETGEINIVYKRKEGGYGLI 29 F+ F N +T +++IVYKR +G YGLI Sbjct: 156 FFLFLNSDTNQLDIVYKRDDGKYGLI 181 [97][TOP] >UniRef100_C1CWW9 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWW9_DEIDV Length = 188 Score = 92.0 bits (227), Expect = 2e-17 Identities = 53/144 (36%), Positives = 79/144 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + V ++RAEEH Y +ID S +++R+LRK K R+MK + Sbjct: 56 VEVQLNVPNGIIRAEEHHSDMYAAIDKASDVLERQLRKFKT------RYMKQRHET---- 105 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 +P P G E ++ DD E + E+VR K FDM P++ +A+ Q+E + HDFY F Sbjct: 106 --VPQP-GPGPAEADVNAGLDDVSEFMPEIVRQKRFDMRPMSPEDAVTQMEALGHDFYVF 162 Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23 N + +VY+R++G YGLI P Sbjct: 163 MNMGSNACGVVYRRRDGHYGLIEP 186 [98][TOP] >UniRef100_B1YLH2 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YLH2_EXIS2 Length = 187 Score = 92.0 bits (227), Expect = 2e-17 Identities = 57/149 (38%), Positives = 82/149 (55%) Frame = -1 Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287 E V V + + +L+RAE+ Y +IDLV ++R++RK K K GR G Sbjct: 49 EKQKVEVTIPMPNLLLRAEDVNGDMYAAIDLVVDKLERQIRKHKTKINRRGRAKDGGIGE 108 Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107 F + E E E ++DE EL E+VRTK F + P+ EAI Q++M+ H Sbjct: 109 YFKTL--------EGPEAEAPVYEEDEAEL--ELVRTKRFTLKPMDTEEAILQMDMLGHT 158 Query: 106 FYAFRNEETGEINIVYKRKEGGYGLIIPK 20 F+ F + ETG N+VY+RK+G YGLI P+ Sbjct: 159 FFVFSDAETGNTNVVYRRKDGRYGLIEPE 187 [99][TOP] >UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KKP2_9FIRM Length = 198 Score = 92.0 bits (227), Expect = 2e-17 Identities = 52/146 (35%), Positives = 83/146 (56%), Gaps = 1/146 (0%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ ++R+E+ + Y SIDLV +I+R+LRK K K + Sbjct: 63 IEVTIPVKGSIIRSEQTSSDMYVSIDLVEEVIERQLRKYKNKLVAKSQ----------GH 112 Query: 274 VILPLPSGDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98 +PSG + E IE + D++E+ +VRTK F + P+ +A Q+E++ H F+ Sbjct: 113 PTAAVPSGSIKKEFIESDDESSDDDEI--RIVRTKKFGIKPMFPEDACIQMELLGHSFFV 170 Query: 97 FRNEETGEINIVYKRKEGGYGLIIPK 20 F N ET E+N+VYKRK+G +GLI P+ Sbjct: 171 FSNAETDEVNVVYKRKDGSFGLIEPE 196 [100][TOP] >UniRef100_A0NI00 Ribosomal subunit interface protein n=1 Tax=Oenococcus oeni ATCC BAA-1163 RepID=A0NI00_OENOE Length = 190 Score = 92.0 bits (227), Expect = 2e-17 Identities = 52/146 (35%), Positives = 84/146 (57%) Frame = -1 Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287 ++ + V + + + +RAEE Y ++DLVS+ + R++RK K + R +G + Sbjct: 50 KTFKIEVTIPLPYLTLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGI 108 Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107 F+E I P+PS ED+ K D V+R K + P+ + EA+ Q+EM+DHD Sbjct: 109 DFNEAIDPVPSDTNEDK------KID-------VIRRKTLSLKPMDIEEAVLQMEMLDHD 155 Query: 106 FYAFRNEETGEINIVYKRKEGGYGLI 29 F+ F N +T +++IVYKR +G YGLI Sbjct: 156 FFLFLNSDTNQLDIVYKRDDGKYGLI 181 [101][TOP] >UniRef100_C2KX79 Ribosome-associated inhibitor A n=1 Tax=Oribacterium sinus F0268 RepID=C2KX79_9FIRM Length = 176 Score = 91.7 bits (226), Expect = 3e-17 Identities = 53/145 (36%), Positives = 81/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ ++RAEE Y SIDLV +++R++RK K K RH Sbjct: 50 IEVTIPVKGSVIRAEEATPDMYQSIDLVVDVLERQIRKYKNKLIQ--RHQAA-------- 99 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 S + IE P +D+EE ++VRTK+ D+ P+T EA Q+E++ H F+ F Sbjct: 100 ------SDFSSEFIEEKPAQDEEEI---KIVRTKHIDLKPMTAEEACLQMELLGHSFFVF 150 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 ++ TG++N+VYKRK YGLI P+ Sbjct: 151 QDGNTGKVNVVYKRKANSYGLIEPE 175 [102][TOP] >UniRef100_C0CVD1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVD1_9CLOT Length = 176 Score = 91.7 bits (226), Expect = 3e-17 Identities = 53/145 (36%), Positives = 80/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ +RAEE + Y SIDLV +I+R++R+ ++K D K L FS+ Sbjct: 50 IEVTIPVKGNTIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAALSFSQ 104 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + ++ED+I I V+TK F + P EA Q+EM+ H+FY F Sbjct: 105 AFIDEEEDEQEDDIRI--------------VKTKKFAIKPTIPEEACLQMEMLGHNFYVF 150 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T ++N+VYKRK G YGLI P+ Sbjct: 151 LNSDTDQVNVVYKRKNGTYGLIEPE 175 [103][TOP] >UniRef100_B9I261 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I261_POPTR Length = 118 Score = 91.7 bits (226), Expect = 3e-17 Identities = 47/90 (52%), Positives = 60/90 (66%) Frame = -1 Query: 352 KLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTK 173 KLRKIK+KE+DHGRHMKG N+LK E P E + + T + +++ ++E V TK Sbjct: 28 KLRKIKDKESDHGRHMKGFNKLKVRE-----PMSQEVENVADTVSQRKDDDNLDEAVHTK 82 Query: 172 YFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 83 YFDMPPLTV EAI +L VDH FY F + E Sbjct: 83 YFDMPPLTVHEAIVRLGNVDHAFYGFGHAE 112 [104][TOP] >UniRef100_A5UVY5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UVY5_ROSS1 Length = 193 Score = 91.3 bits (225), Expect = 4e-17 Identities = 52/145 (35%), Positives = 87/145 (60%), Gaps = 1/145 (0%) Frame = -1 Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272 V VV +LVRAE A Y +ID V +QR++ + K+K H R +G R + ++ Sbjct: 57 VTVVGDHGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDK---HWR--RGKLRRQGGQI 111 Query: 271 ILPLPSGDEEDEIEITPQKD-DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + LP E+ D EEE +VRTK F + P+ EA++Q+E++ H+F+ F Sbjct: 112 VEALP------ELAAPSLADTQEEEERPRIVRTKEFQVKPMYSDEAVEQMELLGHNFFIF 165 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 ++ +TG++N++Y+R++G YGLI+P+ Sbjct: 166 QDADTGKLNVLYRRQDGNYGLIVPE 190 [105][TOP] >UniRef100_Q7XYJ6 Ribosomal protein rpS22 (Fragment) n=1 Tax=Bigelowiella natans RepID=Q7XYJ6_BIGNA Length = 170 Score = 91.3 bits (225), Expect = 4e-17 Identities = 64/172 (37%), Positives = 88/172 (51%), Gaps = 14/172 (8%) Frame = -1 Query: 493 NKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG 314 N V E A I V V V+ K+ +R + + Y SIDLV+ ++ RKLRK KE++ G Sbjct: 6 NPAVKENA-HKIEVTVYVKDSKV-IRGSVSSVSEYSSIDLVTDLVNRKLRKYKERK--EG 61 Query: 313 RHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIE--------------EVVRT 176 + R ++ I D D Q D+ + E VVR Sbjct: 62 KRTASGVRTFYTNDI-----SDSSDVEGAAVQGQDDVQQEEYSGIPEGYAPVEDVSVVRR 116 Query: 175 KYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20 K F MPP+++ +A L+ +DHDFY FRN ET EIN+VY+R EGG GLI P+ Sbjct: 117 KKFPMPPISIEDATLCLDYLDHDFYVFRNSETKEINVVYRRAEGGVGLIEPE 168 [106][TOP] >UniRef100_C0Z6T8 Putative uncharacterized protein yvyD n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6T8_BREBN Length = 185 Score = 90.9 bits (224), Expect = 5e-17 Identities = 47/145 (32%), Positives = 85/145 (58%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + + +++RAEE E Y +IDLV ++R++RK K K R ++ + + ++ Sbjct: 52 IEVTIPLSGVIIRAEETHEDMYAAIDLVVEKLERQIRKHKTKLM---RKLRVDSTGRIAQ 108 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 E + + DEE++ ++VRTK FD+ P+ EA+ Q++M+ H F+ F Sbjct: 109 --------RESQPVAVMIPDVDEEDIDIDIVRTKRFDLKPMDAQEAVMQMDMLGHSFFVF 160 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 +N +T ++++VY+R +G YGLI PK Sbjct: 161 QNSDTNDVSVVYRRNDGRYGLIEPK 185 [107][TOP] >UniRef100_Q2B1U0 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B1U0_9BACI Length = 184 Score = 90.9 bits (224), Expect = 5e-17 Identities = 55/142 (38%), Positives = 80/142 (56%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + ++ +++RAEE E Y +IDL+ ++R++RK K K R KG L F+ Sbjct: 53 VEVTIPMQNLVLRAEEDHEDMYAAIDLIVDKLERQIRKHKTKVNRKFRE-KGSPTLMFAS 111 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 DE E ++++ +L EVVR K FD+ P+ EAI Q+ ++ H FY F Sbjct: 112 F----------DEPEAPVLEEEDNDL--EVVRQKSFDLKPMDNEEAILQMNLLGHSFYVF 159 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 N ET N+VYKRK+G YGLI Sbjct: 160 TNAETNRTNVVYKRKDGRYGLI 181 [108][TOP] >UniRef100_C8NDQ1 Ribosomal subunit interface protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NDQ1_9LACT Length = 186 Score = 90.9 bits (224), Expect = 5e-17 Identities = 53/142 (37%), Positives = 83/142 (58%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + +++RAEE + YGSIDLV ++R++RK K K + +R K + Sbjct: 60 VEVTIPLPYLVLRAEETSIDLYGSIDLVVDKLERQVRKHKTK-------INRKSREKGFD 112 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ++LP P+ +EEE E+VRTK D+ P+ EA+ Q+ M+ H+F+ + Sbjct: 113 IVLPT-----------LPEAPEEEETGLEIVRTKRIDLKPMDSEEAVLQMNMLGHNFFIY 161 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 ++ ET E NIVY+RK+G YGLI Sbjct: 162 QDAETNETNIVYRRKDGKYGLI 183 [109][TOP] >UniRef100_C6PFL3 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thermoanaerobacter italicus Ab9 RepID=C6PFL3_9THEO Length = 181 Score = 90.9 bits (224), Expect = 5e-17 Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 9/182 (4%) Frame = -1 Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVV--------VVVEVEKILVRAEEHAETTYG 386 T ++ VVK+V+ + + V ++ V + + + I+ RAEE ++ YG Sbjct: 14 TDGLRDAVVKKVSKLSKYFTEDTEVRTVLSVQKNHHIAEITIPFKGIIFRAEEVSDDMYG 73 Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI-LPLPSGDEEDEIEITPQKDD 209 SID V I+R++ K K K NR +E I +PS +E K++ Sbjct: 74 SIDRVVDKIERQILKHKTKLK---------NRFGANESIRFEIPSVYQE-------AKEE 117 Query: 208 EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29 EEE E+V+TK F + P++ EAI Q+ ++ H+F+ F N +T IN+VYKRK+G YGLI Sbjct: 118 EEETSFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKYGLI 177 Query: 28 IP 23 P Sbjct: 178 EP 179 [110][TOP] >UniRef100_B7IPV2 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group RepID=B7IPV2_BACC2 Length = 180 Score = 90.9 bits (224), Expect = 5e-17 Identities = 60/145 (41%), Positives = 80/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +L+RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVMDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [111][TOP] >UniRef100_B4BN91 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Geobacillus sp. G11MC16 RepID=B4BN91_9BACI Length = 182 Score = 90.9 bits (224), Expect = 5e-17 Identities = 54/142 (38%), Positives = 84/142 (59%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + + +L+RAEE + Y +IDLV+ ++R++RK K K + K +R K + Sbjct: 53 IEVTIPIPHLLLRAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVK 107 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + P+P+G E +DEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F Sbjct: 108 LAAPVPNGAAAAE-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 N ET NIVY+RK+G YGLI Sbjct: 158 TNAETNRTNIVYRRKDGRYGLI 179 [112][TOP] >UniRef100_B0G387 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G387_9FIRM Length = 177 Score = 90.9 bits (224), Expect = 5e-17 Identities = 51/145 (35%), Positives = 84/145 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ ++R+E+ ++ Y SIDLV +I+R+LRK K K ++ +G N FS+ Sbjct: 50 IEVTIPVKGNIIRSEQESDDMYVSIDLVEEVIERQLRKYKNKLV--AKNQEGNN---FSK 104 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + E+DE++I VRTK F + P+ +A Q+E++ H+F+ F Sbjct: 105 TLFETEESIEDDEVKI--------------VRTKRFGIKPMYPEDACVQMELLGHNFFVF 150 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N E E+N+VYKRK+G +GLI P+ Sbjct: 151 FNAENEEVNVVYKRKDGSFGLIEPE 175 [113][TOP] >UniRef100_A4ISU0 Ribosomal subunit interface protein n=1 Tax=Geobacillus thermodenitrificans NG80-2 RepID=A4ISU0_GEOTN Length = 182 Score = 90.5 bits (223), Expect = 7e-17 Identities = 54/142 (38%), Positives = 84/142 (59%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + + +L+RAEE + Y +IDLV+ ++R++RK K K + K +R K + Sbjct: 53 IEVTIPIPHLLLRAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVK 107 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + P+P+G E +DEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F Sbjct: 108 LAAPVPNGAAAVE-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 N ET NIVY+RK+G YGLI Sbjct: 158 TNAETNRTNIVYRRKDGRYGLI 179 [114][TOP] >UniRef100_B5UPY3 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group RepID=B5UPY3_BACCE Length = 180 Score = 90.5 bits (223), Expect = 7e-17 Identities = 60/145 (41%), Positives = 80/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +L+RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [115][TOP] >UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHR0_9FIRM Length = 178 Score = 90.5 bits (223), Expect = 7e-17 Identities = 57/145 (39%), Positives = 83/145 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ LVR+E+ + Y SIDLV +I+R+LRK K K R +G N F + Sbjct: 50 IEVTIPVKGGLVRSEQESSDMYVSIDLVEEVIERQLRKYKNKLV--AREQEGGN---FKQ 104 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 D ED IE D+ E+ ++VRTK F P+ +A Q+E++ HDFY F Sbjct: 105 EFF-----DAEDNIE------DDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFYVF 151 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N E+ E+N+VY+RK G +GLI P+ Sbjct: 152 CNAESDEVNVVYRRKNGTFGLIEPE 176 [116][TOP] >UniRef100_B9RPC0 LRX1, putative n=1 Tax=Ricinus communis RepID=B9RPC0_RICCO Length = 538 Score = 90.5 bits (223), Expect = 7e-17 Identities = 39/50 (78%), Positives = 40/50 (80%), Gaps = 7/50 (14%) Frame = +1 Query: 409 PQPAPVFSPPPPPP---PPVYSPPPPPPPVYSPPPPP----PSPPPPSPP 537 P P PV+SPPPPPP PPVYSPPPPPPPVYSPPPPP P PPPPSPP Sbjct: 259 PPPPPVYSPPPPPPSPPPPVYSPPPPPPPVYSPPPPPPVYSPPPPPPSPP 308 Score = 89.7 bits (221), Expect = 1e-16 Identities = 40/57 (70%), Positives = 41/57 (71%), Gaps = 14/57 (24%) Frame = +1 Query: 409 PQPAPVFSPPPPPP------PPVYSPPPPP--------PPVYSPPPPPPSPPPPSPP 537 P P PV+SPPPPPP PPVYSPPPPP PPVYSPPPPPPSPPPPSPP Sbjct: 292 PPPPPVYSPPPPPPSPPPPPPPVYSPPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPP 348 Score = 85.5 bits (210), Expect = 2e-15 Identities = 35/43 (81%), Positives = 35/43 (81%) Frame = +1 Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537 P P P PPPPPPPVYS PPPPPPVYSPPPPPPSPPPP PP Sbjct: 272 PSPPPPVYSPPPPPPPVYS-PPPPPPVYSPPPPPPSPPPPPPP 313 Score = 79.0 bits (193), Expect = 2e-13 Identities = 36/53 (67%), Positives = 38/53 (71%), Gaps = 8/53 (15%) Frame = +1 Query: 409 PQPAPVFSPPPPP---PPPVY---SPPPPPPPVYSPPPPP--PSPPPPSPPSC 543 P P+P SPPPPP PPP+Y SPPPPP PVYSPPPPP PPPPSPP C Sbjct: 405 PPPSPPHSPPPPPHSPPPPIYPYLSPPPPPHPVYSPPPPPVYSPPPPPSPPPC 457 Score = 75.9 bits (185), Expect = 2e-12 Identities = 37/53 (69%), Positives = 38/53 (71%), Gaps = 11/53 (20%) Frame = +1 Query: 409 PQPAPVFSPPP----PPPPPVYSPPPPPP----PVYSPPPPPP---SPPPPSP 534 P P PV+ PPP PPPPPVYSPPPPPP PVYSPPPPPP SPPPP P Sbjct: 245 PSP-PVYLPPPVYSPPPPPPVYSPPPPPPSPPPPVYSPPPPPPPVYSPPPPPP 296 Score = 75.5 bits (184), Expect = 2e-12 Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 6/53 (11%) Frame = +1 Query: 400 LHAPQPAPVFSPPPPP-PPPVYSPPPPPP-PVYSPPPPPPSPPPPS----PPS 540 +++P P PV+SPPPPP PPP PPPPPP YSPPPP PSPPPP+ PPS Sbjct: 437 VYSPPPPPVYSPPPPPSPPPCIEPPPPPPCAEYSPPPPSPSPPPPTQYKPPPS 489 Score = 75.1 bits (183), Expect = 3e-12 Identities = 35/43 (81%), Positives = 35/43 (81%), Gaps = 2/43 (4%) Frame = +1 Query: 415 PAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPP--SPP 537 P PV SPP PPPVYSPPPPPP VYSPPPPPPSPPPP SPP Sbjct: 241 PMPVPSPPVYLPPPVYSPPPPPP-VYSPPPPPPSPPPPVYSPP 282 Score = 74.7 bits (182), Expect = 4e-12 Identities = 35/53 (66%), Positives = 36/53 (67%), Gaps = 8/53 (15%) Frame = +1 Query: 409 PQPAPVFSPPPPP-------PPPVYSPPPPPPPVYSPPPPPPSPPPPSP-PSC 543 P P PV+SPPPPP PPPVYSPPPPP P PPPPSPPPPSP P C Sbjct: 309 PPPPPVYSPPPPPSPPPPSPPPPVYSPPPPP-----PSPPPPSPPPPSPLPPC 356 Score = 73.6 bits (179), Expect = 9e-12 Identities = 31/43 (72%), Positives = 33/43 (76%) Frame = +1 Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537 P P P+FSPPPP P YS PPPP P +SPPPPP SPPPPSPP Sbjct: 369 PPPPPLFSPPPPTPY-YYSSPPPPSPPHSPPPPPHSPPPPSPP 410 Score = 72.0 bits (175), Expect = 3e-11 Identities = 36/59 (61%), Positives = 37/59 (62%), Gaps = 15/59 (25%) Frame = +1 Query: 403 HAPQPA--PVFSPPPPP-------PPPVYSPPPPP--PPVYSPPPPPP----SPPPPSP 534 H+P P P SPPPPP PPPVYSPPPPP PP PPPPPP SPPPPSP Sbjct: 418 HSPPPPIYPYLSPPPPPHPVYSPPPPPVYSPPPPPSPPPCIEPPPPPPCAEYSPPPPSP 476 Score = 70.1 bits (170), Expect = 1e-10 Identities = 34/58 (58%), Positives = 35/58 (60%), Gaps = 11/58 (18%) Frame = +1 Query: 403 HAPQPAPVFSPPP--------PPPPPVYSPPPPPPPVYSPPPPPPSPP---PPSPPSC 543 H+P P P PPP PPP PVYS PPPPPVYSPPPPP PP PP PP C Sbjct: 411 HSPPPPPHSPPPPIYPYLSPPPPPHPVYS--PPPPPVYSPPPPPSPPPCIEPPPPPPC 466 Score = 69.7 bits (169), Expect = 1e-10 Identities = 31/45 (68%), Positives = 33/45 (73%), Gaps = 4/45 (8%) Frame = +1 Query: 415 PAPVFSPPPPPP-PPVYSPPPP---PPPVYSPPPPPPSPPPPSPP 537 P PV+SPPPPPP PP SPPPP PP V PPPPPP+ PPP PP Sbjct: 329 PPPVYSPPPPPPSPPPPSPPPPSPLPPCVRPPPPPPPNSPPPPPP 373 Score = 68.9 bits (167), Expect = 2e-10 Identities = 30/47 (63%), Positives = 33/47 (70%), Gaps = 4/47 (8%) Frame = +1 Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPP----SPPPPSPP 537 P P P PPPPPPP + PPPPPP++SPPPP P SPPPPSPP Sbjct: 350 PSPLPPCVRPPPPPPP--NSPPPPPPLFSPPPPTPYYYSSPPPPSPP 394 Score = 65.9 bits (159), Expect = 2e-09 Identities = 31/50 (62%), Positives = 34/50 (68%), Gaps = 7/50 (14%) Frame = +1 Query: 409 PQPAPVF--SPPPP-----PPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537 P P P + SPPPP PPPP +SPPPP PP +SPPPPP SPPPP P Sbjct: 378 PPPTPYYYSSPPPPSPPHSPPPPPHSPPPPSPP-HSPPPPPHSPPPPIYP 426 Score = 65.1 bits (157), Expect = 3e-09 Identities = 30/52 (57%), Positives = 30/52 (57%), Gaps = 9/52 (17%) Frame = +1 Query: 409 PQPAPVFSPPPPPPPPVYSPPP----PPPPVYSPPPPPPSPPPP-----SPP 537 P P P PPPPPP YSPPP PPPP PPP PSPPPP SPP Sbjct: 452 PSPPPCIEPPPPPPCAEYSPPPPSPSPPPPTQYKPPPSPSPPPPPVHYYSPP 503 Score = 65.1 bits (157), Expect = 3e-09 Identities = 31/52 (59%), Positives = 33/52 (63%), Gaps = 10/52 (19%) Frame = +1 Query: 409 PQPAPVFSPPPP----PPPPVYSPPP----PPPPV--YSPPPPPPSPPPPSP 534 P P +SPPPP PPP Y PPP PPPPV YSPPPP SPPPP+P Sbjct: 463 PPPCAEYSPPPPSPSPPPPTQYKPPPSPSPPPPPVHYYSPPPPSQSPPPPAP 514 Score = 64.7 bits (156), Expect = 4e-09 Identities = 29/46 (63%), Positives = 30/46 (65%), Gaps = 7/46 (15%) Frame = +1 Query: 421 PVFSPPPPPPPPVYSPPPP---PPPVYSPPPPP----PSPPPPSPP 537 P PPPP PP+ P PP PPPVYSPPPPP P PPPPSPP Sbjct: 230 PTLPAPPPPSPPMPVPSPPVYLPPPVYSPPPPPPVYSPPPPPPSPP 275 [117][TOP] >UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x Populus deltoides RepID=A9PJW3_9ROSI Length = 268 Score = 90.5 bits (223), Expect = 7e-17 Identities = 51/80 (63%), Positives = 60/80 (75%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 +VRAEE AET Y SIDL SSIIQRKLRKIK+KE+DHGRHMKG NRLK E P+ E Sbjct: 153 VVRAEEDAETIYASIDLASSIIQRKLRKIKDKESDHGRHMKGFNRLKVRE---PMHQVVE 209 Query: 244 EDEIEITPQKDDEEELIEEV 185 +D E++ Q+D E+ IEEV Sbjct: 210 DDADEVSQQED--EDYIEEV 227 [118][TOP] >UniRef100_Q8ENI5 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ENI5_OCEIH Length = 185 Score = 90.1 bits (222), Expect = 9e-17 Identities = 50/144 (34%), Positives = 83/144 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + + +L+R E Y ++DLV ++R++RK K K R P F+E Sbjct: 52 IEVTIPMTNLLLRGEVQHIDLYAAVDLVVDKLERQIRKHKTKINRKFRQNGSPKHA-FAE 110 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + E E + ++DE +L E+VRTK F++ P+ EAI Q++M+ H+F+ F Sbjct: 111 M---------EKEARLAEDEEDENQL--EIVRTKRFNLKPMDSEEAILQMDMLGHEFFVF 159 Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23 N+++GE N+VY+R++G YGLI P Sbjct: 160 TNDDSGETNVVYRRRDGKYGLIEP 183 [119][TOP] >UniRef100_C5VNV1 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VNV1_CLOBO Length = 178 Score = 90.1 bits (222), Expect = 9e-17 Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 2/147 (1%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKF 281 V V + +++RAEE Y +IDLV ++R++RK K K + HG + LKF Sbjct: 50 VEVTIPFNGVILRAEEANNDMYAAIDLVLEKLERQIRKQKTKLEKRKHG------DALKF 103 Query: 280 SEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 101 + +P KD E+ + ++V+TK F + P++ EA+ Q+E++ H+F+ Sbjct: 104 QFIPEYIP-------------KDAEDNVESKIVKTKKFAVKPMSNEEAVLQMELLGHNFF 150 Query: 100 AFRNEETGEINIVYKRKEGGYGLIIPK 20 FRN +T E+N++YKRK+G YGLI P+ Sbjct: 151 VFRNSDTDEVNVLYKRKDGQYGLIEPE 177 [120][TOP] >UniRef100_C9RVC1 Sigma 54 modulation protein/ribosomal protein S30EA n=2 Tax=Geobacillus RepID=C9RVC1_9BACI Length = 182 Score = 90.1 bits (222), Expect = 9e-17 Identities = 54/142 (38%), Positives = 83/142 (58%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + + +L+RAEE E Y +IDLV+ ++R++RK K K + K +R K ++ Sbjct: 53 IEVTIPIPHLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKEAK 107 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + P+ G E +EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F Sbjct: 108 LAAPVSIGASAAE--------NEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 N ET NIVY+RK+G YGLI Sbjct: 158 TNAETNRTNIVYRRKDGKYGLI 179 [121][TOP] >UniRef100_C2U573 Ribosome-associated factor Y n=3 Tax=Bacillus cereus RepID=C2U573_BACCE Length = 180 Score = 90.1 bits (222), Expect = 9e-17 Identities = 60/145 (41%), Positives = 80/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +L+RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [122][TOP] >UniRef100_B7HEI9 Ribosomal subunit interface protein n=9 Tax=Bacillus cereus group RepID=B7HEI9_BACC4 Length = 180 Score = 90.1 bits (222), Expect = 9e-17 Identities = 60/145 (41%), Positives = 80/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +L+RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [123][TOP] >UniRef100_C2QJQ3 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Bacillus cereus R309803 RepID=C2QJQ3_BACCE Length = 180 Score = 90.1 bits (222), Expect = 9e-17 Identities = 60/145 (41%), Positives = 80/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +L+RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [124][TOP] >UniRef100_B6G8G1 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G8G1_9ACTN Length = 194 Score = 90.1 bits (222), Expect = 9e-17 Identities = 52/145 (35%), Positives = 79/145 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V V ++R EH Y +IDL + + R+LRK K + D+ + L +E Sbjct: 56 VEVTVRARGSVIRVAEHGADMYAAIDLAADKVTRQLRKFKTRVVDNRQQ-----GLSAAE 110 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 V P D D + P+++D++ +VR K ++ P+T +A+ Q +++ HDFY F Sbjct: 111 VAPVEPVADLADLL--IPEEEDDQ-----LVRVKEIELTPMTEEQALVQTDLLGHDFYVF 163 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N TG IN+VY RK GGYG+I PK Sbjct: 164 ENSTTGLINVVYHRKNGGYGIIKPK 188 [125][TOP] >UniRef100_UPI00006DCB57 hypothetical protein CdifQ_04002839 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCB57 Length = 138 Score = 89.7 bits (221), Expect = 1e-16 Identities = 52/141 (36%), Positives = 84/141 (59%) Frame = -1 Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272 V ++ + ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F + Sbjct: 3 VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENL 59 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 + + E D+ + DDEE+ + R K F++ P++ EAI Q+E+V H+FY FR Sbjct: 60 DF-IDNSSEFDDYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 114 Query: 91 NEETGEINIVYKRKEGGYGLI 29 N++ EINIVYKRK GGYGLI Sbjct: 115 NQDNFEINIVYKRKAGGYGLI 135 [126][TOP] >UniRef100_A0Q2Y0 Ribosomal subunit interface protein n=1 Tax=Clostridium novyi NT RepID=A0Q2Y0_CLONN Length = 178 Score = 89.7 bits (221), Expect = 1e-16 Identities = 50/145 (34%), Positives = 84/145 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +++RAE+ Y +ID+V ++R++RK K K + K + LKF Sbjct: 50 VEVTIPFNGVILRAEDSNSDMYAAIDIVLEKLERQIRKQKTKL----QRRKHGDALKFQF 105 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + +P KDDE+ + ++V+TK F + P++ EA+ Q+E++ H+F+ F Sbjct: 106 IPEYVP-------------KDDEDNIESKIVKTKRFAIKPMSREEAVLQMELLGHNFFVF 152 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N ET E+N++YKRK+G YGLI P+ Sbjct: 153 TNAETEEVNVLYKRKDGQYGLIEPE 177 [127][TOP] >UniRef100_D0BMS6 Ribosomal subunit interface protein n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BMS6_9LACT Length = 182 Score = 89.7 bits (221), Expect = 1e-16 Identities = 53/142 (37%), Positives = 82/142 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + +++RAEE + YGSIDLV ++R++RK K K R KG F Sbjct: 54 VEVTIPLPYLVLRAEETSGDLYGSIDLVIDKLERQVRKYKTKINRKSRE-KG-----FDI 107 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + P + P+ DE+E + E+VRTK D+ P+ EA+ Q+ M+ H+F+ + Sbjct: 108 PVAP-----------VVPEPVDEDESVLEIVRTKRVDLKPMDSEEAVLQMNMLGHNFFIY 156 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 ++ ET E +IVY+RK+G YGLI Sbjct: 157 QDAETNETHIVYRRKDGKYGLI 178 [128][TOP] >UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile RepID=C9XLM7_CLODI Length = 187 Score = 89.7 bits (221), Expect = 1e-16 Identities = 52/141 (36%), Positives = 84/141 (59%) Frame = -1 Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272 V ++ + ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F + Sbjct: 52 VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENL 108 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 + + E D+ + DDEE+ + R K F++ P++ EAI Q+E+V H+FY FR Sbjct: 109 DF-IDNSSEFDDYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 163 Query: 91 NEETGEINIVYKRKEGGYGLI 29 N++ EINIVYKRK GGYGLI Sbjct: 164 NQDNFEINIVYKRKAGGYGLI 184 [129][TOP] >UniRef100_C4FCG3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCG3_9ACTN Length = 194 Score = 89.7 bits (221), Expect = 1e-16 Identities = 52/145 (35%), Positives = 78/145 (53%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V V ++R EH Y +IDL + + R+LRK K + D+ + L +E Sbjct: 56 VEVTVRARGSVIRVAEHGADMYAAIDLAAEKVTRQLRKFKTRVVDNRQQ-----GLSAAE 110 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 V P D D + P+ +D++ +VR K ++ P+T EA+ Q +++ HDFY F Sbjct: 111 VAPVEPVADLADLL--LPEDEDDQ-----LVRVKEVELTPMTDEEALVQTDLIGHDFYVF 163 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N TG +N+VY RK GGYG+I PK Sbjct: 164 ENSVTGLVNVVYHRKNGGYGIIKPK 188 [130][TOP] >UniRef100_C3AT15 Ribosome-associated factor Y n=3 Tax=Bacillus RepID=C3AT15_BACMY Length = 180 Score = 89.7 bits (221), Expect = 1e-16 Identities = 58/145 (40%), Positives = 80/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +L+RAEE Y +IDLV ++R++RK K K R P + Sbjct: 50 VEVTIPFTDLLLRAEETHSDMYAAIDLVVDKVERQIRKHKTKVNRKLREKGSPK----TA 105 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 IL P+ E+ K+DE EL VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 106 FILTEPAATLEEV------KEDELEL----VRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [131][TOP] >UniRef100_B7HX18 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group RepID=B7HX18_BACC7 Length = 180 Score = 89.7 bits (221), Expect = 1e-16 Identities = 59/145 (40%), Positives = 80/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +L+RAEE Y +IDLV ++R++RK K K R KG + F Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDEVEEDQLELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [132][TOP] >UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BAM2_9FIRM Length = 189 Score = 89.7 bits (221), Expect = 1e-16 Identities = 57/145 (39%), Positives = 80/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ ++R+E+ + Y SIDLV II+R+LRK K K +G + + E Sbjct: 61 IEVTIPVKGNIIRSEQESSDMYVSIDLVEEIIERQLRKYKTKLI---AKQQGGHDFR-QE 116 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 I S E DEIEI VRTK F + P+ +A Q+E++ H+FY F Sbjct: 117 FIESDTSAAESDEIEI--------------VRTKRFGIKPMFPEDACIQMELLGHNFYVF 162 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N ET E+N+VYKRK G YGLI P+ Sbjct: 163 SNAETDEVNVVYKRKNGTYGLIEPE 187 [133][TOP] >UniRef100_Q72XS8 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group RepID=Q72XS8_BACC1 Length = 180 Score = 89.7 bits (221), Expect = 1e-16 Identities = 59/145 (40%), Positives = 80/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +L+RAEE Y +IDLV ++R++RK K K R KG + F Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [134][TOP] >UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile ATCC 43255 RepID=UPI00017F5ACC Length = 185 Score = 89.4 bits (220), Expect = 2e-16 Identities = 53/141 (37%), Positives = 82/141 (58%) Frame = -1 Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272 V ++ + ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F Sbjct: 52 VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFEN- 107 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 L D E + ++DE +IE R K F++ P++ EAI Q+E+V H+FY FR Sbjct: 108 ---LDFIDNSSEFDDYDDEEDENIVIE---RRKKFNVKPMSSEEAILQMELVGHNFYMFR 161 Query: 91 NEETGEINIVYKRKEGGYGLI 29 N++ EINIVYKRK GGYGLI Sbjct: 162 NQDNFEINIVYKRKAGGYGLI 182 [135][TOP] >UniRef100_B8GDB0 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8GDB0_CHLAD Length = 197 Score = 89.4 bits (220), Expect = 2e-16 Identities = 46/137 (33%), Positives = 85/137 (62%), Gaps = 1/137 (0%) Frame = -1 Query: 427 ILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK-GPNRLKFSEVILPLPSG 251 +++RAEE A Y +ID V ++QR++++ K+K R ++ N L +E + Sbjct: 65 VILRAEERAADLYAAIDAVQEVLQRQIQRYKDKYWRRSRELRRATNGLTPAEEVA---IA 121 Query: 250 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 71 + E E P E E + +V+RTK F + P+ V +AI+Q+E++ H F+ F++ ET +I Sbjct: 122 EAETEAMTAPV---ETEPVAKVIRTKTFRLRPMFVDDAIEQMELLGHTFFVFQDAETMQI 178 Query: 70 NIVYKRKEGGYGLIIPK 20 +++Y+R++G YG+I+P+ Sbjct: 179 SVLYRRRDGNYGVIVPE 195 [136][TOP] >UniRef100_C6Q3Y9 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q3Y9_9THEO Length = 181 Score = 89.4 bits (220), Expect = 2e-16 Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 12/185 (6%) Frame = -1 Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVV--------VVVEVEKILVRAEEHAETTYG 386 T ++ VVK+V+ + + V ++ V + + + I+ RAEE ++ YG Sbjct: 14 TDGLRDAVVKKVSKLSKYFTEDTEVRTVLSVQKNHHIAEITIPFKGIIFRAEEVSDDMYG 73 Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITP----Q 218 SID V I+R++ K K K NR +E I EI P Sbjct: 74 SIDRVVDKIERQILKHKTKLK---------NRFGANESI----------RFEIPPVYQEA 114 Query: 217 KDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGY 38 K++EEE E+V+TK F + P++ EAI Q+ ++ H+F+ F N +T IN+VYKRK+G Y Sbjct: 115 KEEEEETSFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKY 174 Query: 37 GLIIP 23 GLI P Sbjct: 175 GLIEP 179 [137][TOP] >UniRef100_C2EGB2 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EGB2_9LACO Length = 184 Score = 89.4 bits (220), Expect = 2e-16 Identities = 52/142 (36%), Positives = 82/142 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + +++RAEE + Y SIDLV+ ++R++RK K K R KG +F+ Sbjct: 54 VEVTIPLPYLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKNFEFA- 111 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 P DE++E+E + E+VRTK + P+ EA+ Q++M+ HDF+ + Sbjct: 112 -----PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGHDFFIY 157 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 + E G INIVY+R++G YGLI Sbjct: 158 EDAENGGINIVYRRRDGRYGLI 179 [138][TOP] >UniRef100_A3DJE4 Sigma 54 modulation protein / SSU ribosomal protein S30P n=3 Tax=Clostridium thermocellum RepID=A3DJE4_CLOTH Length = 177 Score = 89.4 bits (220), Expect = 2e-16 Identities = 68/185 (36%), Positives = 100/185 (54%), Gaps = 11/185 (5%) Frame = -1 Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVVV-----VVEV----EKILVRAEEHAETTY 389 T A+K VK+V + +K A +I + V +VEV E L+RAEE + Y Sbjct: 13 TEALKEAAVKKVGKL-DKYFRRDAEATITMSVQKNRHIVEVTIPFEGGLLRAEEDSPDMY 71 Query: 388 GSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQK 215 SID V ++R++R+ K K + H ++ N +KF ++DE+E P+ Sbjct: 72 ASIDKVIDSLERQIRRNKTKLEKKVHDGSLRFEN-IKF-----------DDDEVEEEPKF 119 Query: 214 DDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYG 35 EVVRTK F + P+TV EAI Q+ ++ H F+ F N ET E N+VY+RK+G YG Sbjct: 120 --------EVVRTKKFAIKPMTVEEAILQMNLLGHQFFMFSNAETNEANVVYRRKDGNYG 171 Query: 34 LIIPK 20 LI P+ Sbjct: 172 LIEPE 176 [139][TOP] >UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJJ3_EUBSP Length = 179 Score = 89.4 bits (220), Expect = 2e-16 Identities = 50/145 (34%), Positives = 82/145 (56%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ ++R+E+ + Y SIDLV +I+R+LRK K K RH +G K Sbjct: 50 IEVTIPVKGGIIRSEQESSDMYVSIDLVEEVIERQLRKYKNKLI--ARHQEGSGNFK--- 104 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ++ + + +D+ E+ ++VRTK F P+ +A Q+E++ HDF+ F Sbjct: 105 ----------QEFFDSGERSEDDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFFVF 152 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N ET E+N+VY+RK G +GLI P+ Sbjct: 153 CNAETDEVNVVYRRKNGTFGLIEPE 177 [140][TOP] >UniRef100_UPI0001789185 sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789185 Length = 188 Score = 89.0 bits (219), Expect = 2e-16 Identities = 54/142 (38%), Positives = 82/142 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + +++RAE+ ++ Y SID V ++R++RK K K R +K LK Sbjct: 52 VEVTIPLTGVVLRAEDRSDDMYASIDAVVDKLERQIRKHKTKLN---RKIKQEGGLK--- 105 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ++ +++ + DE+E EVVRTK F M P+ V EAI Q+ MV H+F+ F Sbjct: 106 TLIAENGAAATSQVDAEQVEYDEDEY--EVVRTKRFTMKPMDVEEAILQMNMVGHNFFVF 163 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 N +T E+N+VYKR +G YGLI Sbjct: 164 SNIDTQEVNVVYKRDDGKYGLI 185 [141][TOP] >UniRef100_Q9K6W6 Ribosomal protein S30AE family n=1 Tax=Bacillus halodurans RepID=Q9K6W6_BACHD Length = 187 Score = 89.0 bits (219), Expect = 2e-16 Identities = 52/145 (35%), Positives = 86/145 (59%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + + ++L+RAEE Y +IDLV ++R++RK K K R +G + F Sbjct: 52 IEVTIPMSRLLLRAEEKHSDMYAAIDLVIEKLERQIRKHKTKVNRKFRQ-EGSLKYMFKN 110 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + P+ EE +E +E++L +VVR K F++ P+ EAI Q++M+ H+F+ F Sbjct: 111 DLEPMDGMREEILLE------EEDDL--QVVRKKRFNLKPMDTEEAILQMDMLGHNFFVF 162 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +G+ N+VY+RK+G YGLI P+ Sbjct: 163 SNAISGDTNVVYRRKDGKYGLIEPE 187 [142][TOP] >UniRef100_B7GL70 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GL70_ANOFW Length = 182 Score = 88.6 bits (218), Expect = 3e-16 Identities = 57/142 (40%), Positives = 79/142 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + + +I++RAEE + Y +IDLV ++R++RK K K R K N + + Sbjct: 53 IEVTIPMPQIVLRAEERHDDMYAAIDLVVDKLERQIRKHKTKVNRKMRE-KEANGVTLTA 111 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + P EE E EEE EVVRTK F + P+ EAI Q+ M+ H+FY F Sbjct: 112 TV---PVATEEHE---------EEEF--EVVRTKRFSLKPMDSEEAILQMNMLGHNFYVF 157 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 N ET N+VYKRK+G YGLI Sbjct: 158 INAETNRTNVVYKRKDGKYGLI 179 [143][TOP] >UniRef100_C2LVK8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus hominis SK119 RepID=C2LVK8_STAHO Length = 191 Score = 88.6 bits (218), Expect = 3e-16 Identities = 47/142 (33%), Positives = 81/142 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + ++ + +RAEE + Y IDLV+S ++R++RK K + R P E Sbjct: 54 IEVTIPLKNVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKNRDNGEP------E 107 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + +++E T + +E E+ E++R+K F + P+ EA+ Q++++ HDFY F Sbjct: 108 PFIAEQQTVVNEDVEATSESSNENEI--EIIRSKQFSLKPMDSEEAVLQMDLLGHDFYIF 165 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 + ET +IVY+RK+G YGLI Sbjct: 166 TDRETDGTSIVYRRKDGKYGLI 187 [144][TOP] >UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile QCD-23m63 RepID=UPI00017F60C6 Length = 185 Score = 88.2 bits (217), Expect = 4e-16 Identities = 53/141 (37%), Positives = 81/141 (57%) Frame = -1 Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272 V ++ + ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F V Sbjct: 52 VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENV 108 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 S + +D DDEE + R K F++ P++ EAI Q+E+V H+FY FR Sbjct: 109 DFIDNSSEFDDY-------DDEEYENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 161 Query: 91 NEETGEINIVYKRKEGGYGLI 29 N++ EINIVYKRK GGYGLI Sbjct: 162 NQDNFEINIVYKRKAGGYGLI 182 [145][TOP] >UniRef100_C5D7S1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Geobacillus sp. WCH70 RepID=C5D7S1_GEOSW Length = 182 Score = 88.2 bits (217), Expect = 4e-16 Identities = 51/142 (35%), Positives = 83/142 (58%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + + ++L+RAEE + Y +IDLV+ ++R++RK K K +L+ E Sbjct: 53 IEVTIPMPQLLLRAEERHDDMYAAIDLVADKLERQIRKHKTKVN---------RKLRNKE 103 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 L + + +E +++EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F Sbjct: 104 TKQVLVTQNNNPPVE----ENEEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 N ET NIVY+RK+G YGLI Sbjct: 158 TNAETNRTNIVYRRKDGKYGLI 179 [146][TOP] >UniRef100_B2TK14 Ribosome-associated protein Y n=3 Tax=Clostridium botulinum RepID=B2TK14_CLOBB Length = 177 Score = 88.2 bits (217), Expect = 4e-16 Identities = 56/182 (30%), Positives = 103/182 (56%), Gaps = 8/182 (4%) Frame = -1 Query: 541 TRAVKVVVVKEVAAV---VNKLVAEAAVESIP-----VVVVVEVEKILVRAEEHAETTYG 386 T A++ +V K+++ + N + A S+ V V++ +++R EE E Y Sbjct: 13 TNALREMVEKKISKLGKYFNSDIEAKATLSVQRNRQIVEVMIPFNGVVLRGEEANEDMYR 72 Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206 +IDLV+ ++R++RK K K + K LKF E++ +++P DE Sbjct: 73 AIDLVAEKLERQIRKQKTKLS-----RKKSGSLKFGEIV------------DLSPVAVDE 115 Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26 EE ++V+ K F + P+ + EAI Q+E+V H+F+ +++ ++ +IN++YKRK+G YGL+ Sbjct: 116 EEA--KLVKRKRFGVKPMDIDEAILQMELVGHNFFVYQDVDSNKINVIYKRKDGDYGLLD 173 Query: 25 PK 20 P+ Sbjct: 174 PE 175 [147][TOP] >UniRef100_C3GRH2 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1 RepID=C3GRH2_BACTU Length = 180 Score = 88.2 bits (217), Expect = 4e-16 Identities = 59/145 (40%), Positives = 79/145 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +L+RAEE Y +IDLV ++R++RK K K R KG + F Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [148][TOP] >UniRef100_A9VQA3 Sigma 54 modulation protein/ribosomal protein S30EA n=2 Tax=Bacillus cereus group RepID=A9VQA3_BACWK Length = 180 Score = 88.2 bits (217), Expect = 4e-16 Identities = 59/145 (40%), Positives = 78/145 (53%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + +L+RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 50 IEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [149][TOP] >UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P2P9_9CLOT Length = 179 Score = 88.2 bits (217), Expect = 4e-16 Identities = 52/145 (35%), Positives = 83/145 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + ++ ++RAEE +E Y SIDLV +I+R++R+ K + + K+ Sbjct: 53 IEVTIPMKGHIIRAEEGSEDMYVSIDLVVDVIERQIRRYKTRLMNQ----------KYDG 102 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ++ED++E DDE +I R+K F + P+ V EA Q+E++ HDF+ F Sbjct: 103 TSFKQEFMEQEDDVE-----DDEIRII----RSKKFAIKPMDVEEACVQMELLGHDFFVF 153 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 RN +T E+N+VYKRK YGLI P+ Sbjct: 154 RNADTFEVNVVYKRKGNTYGLIEPE 178 [150][TOP] >UniRef100_A0RKX8 Sigma 54 modulation protein / SSU ribosomal protein S30P n=26 Tax=Bacillus cereus group RepID=A0RKX8_BACAH Length = 180 Score = 88.2 bits (217), Expect = 4e-16 Identities = 59/145 (40%), Positives = 79/145 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +L+RAEE Y +IDLV ++R++RK K K R KG + F Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [151][TOP] >UniRef100_Q4L4H7 Uncharacterized protein SH2139 n=1 Tax=Staphylococcus haemolyticus JCSC1435 RepID=Y2139_STAHJ Length = 192 Score = 88.2 bits (217), Expect = 4e-16 Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 1/143 (0%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK-ETDHGRHMKGPNRLKFS 278 + V + ++ + +RAEE + Y IDLV+S ++R++RK K + H H G + Sbjct: 54 IEVTIPLKNVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKHKTH--GEPEAFVA 111 Query: 277 EVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98 EV P + D++ P D E E+I R+K F + P+ EA+ Q+E++ HDFY Sbjct: 112 EVQEAPP--ENVDDVNAEPTNDSEIEII----RSKQFSLKPMDSEEAVLQMELLGHDFYI 165 Query: 97 FRNEETGEINIVYKRKEGGYGLI 29 F + ET +IVYKRK+G YGLI Sbjct: 166 FTDRETDGTSIVYKRKDGKYGLI 188 [152][TOP] >UniRef100_Q49VV1 Uncharacterized protein SSP1964 n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Y1964_STAS1 Length = 190 Score = 88.2 bits (217), Expect = 4e-16 Identities = 48/142 (33%), Positives = 86/142 (60%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + ++K+ +RAEE + Y IDL+++ ++R++RK K + R+ +G E Sbjct: 54 IEVTIPLKKVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRVNRRNRN-RGEQ-----E 107 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 LP +E++ +EI +++ + IE ++R K F + P+ EA+ Q++++ HDF+ F Sbjct: 108 AFASLP--EEKEAVEIQNDENEADNEIE-IIRAKNFSLKPMDSEEAVLQMDLLGHDFFIF 164 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 + ET +IVYKRK+G YGLI Sbjct: 165 TDRETDGTSIVYKRKDGKYGLI 186 [153][TOP] >UniRef100_Q5WDF7 Ribosomal protein S30EA n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDF7_BACSK Length = 184 Score = 87.8 bits (216), Expect = 5e-16 Identities = 52/145 (35%), Positives = 85/145 (58%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + + K+L+R EE Y +ID+V ++R++RK K K R +G + F Sbjct: 53 IEVTIPMPKLLLRGEEINADMYAAIDIVVEKLERQIRKYKTKVNRKFRQ-EGSLKYMFKN 111 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + PL DE+ +++EL EVVRTK F++ P+ EAI Q++++ H+F+ F Sbjct: 112 ELEPL-----RDEVA------EDDEL--EVVRTKRFNLKPMDAEEAILQMDLLGHNFFVF 158 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 + E+G N+VY+RK+G YGLI P+ Sbjct: 159 SDAESGSTNVVYRRKDGKYGLIEPE 183 [154][TOP] >UniRef100_B9MLV8 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLV8_ANATD Length = 181 Score = 87.8 bits (216), Expect = 5e-16 Identities = 51/154 (33%), Positives = 88/154 (57%), Gaps = 3/154 (1%) Frame = -1 Query: 472 AVESIPVVVVVEV--EKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 299 +VE I +V V + +++RAEE + Y +IDLV ++R++RK K K + + Sbjct: 42 SVEKISHIVEVTIPFHGMILRAEERSNDMYSAIDLVVDTLERQIRKFKTKIAKRAKDAES 101 Query: 298 PNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLE 122 + F E+E P+K+ +EE E + +TK F + P++V EAI Q+ Sbjct: 102 LRYMTF--------------ELE-EPEKEVQEENSEFRIAKTKRFPIKPMSVEEAILQMN 146 Query: 121 MVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20 ++ H+F+ F N++T ++N+VY+R +G YGLI P+ Sbjct: 147 LLGHNFFVFLNQDTDKVNVVYRRNDGAYGLIEPE 180 [155][TOP] >UniRef100_C6QNN3 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QNN3_9BACI Length = 183 Score = 87.8 bits (216), Expect = 5e-16 Identities = 52/142 (36%), Positives = 84/142 (59%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + + ++L+RAEE + Y +IDLV+ ++R++RK K K + K +R K + Sbjct: 53 IEVTIPMPQLLLRAEERHDDMYAAIDLVADKLERQIRKHKTKV-----NRKLRDRDKEVK 107 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + + + P +D+EEE E +VRTK+F + P+ EAI Q+ ++ H+F+ F Sbjct: 108 QVATVQTN--------APAEDNEEEEFE-IVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 158 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 N ET NIVY+RK+G YGLI Sbjct: 159 TNAETNRTNIVYRRKDGKYGLI 180 [156][TOP] >UniRef100_C2YZ14 Ribosome-associated factor Y n=1 Tax=Bacillus cereus AH1271 RepID=C2YZ14_BACCE Length = 180 Score = 87.8 bits (216), Expect = 5e-16 Identities = 59/145 (40%), Positives = 79/145 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +L+RAEE Y +IDLV ++R++RK K K R KG + F Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [157][TOP] >UniRef100_C2SSP0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus BDRD-ST196 RepID=C2SSP0_BACCE Length = 180 Score = 87.8 bits (216), Expect = 5e-16 Identities = 59/145 (40%), Positives = 78/145 (53%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + +L+RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 50 IEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [158][TOP] >UniRef100_C2Q3D0 Ribosome-associated factor Y n=2 Tax=Bacillus cereus RepID=C2Q3D0_BACCE Length = 180 Score = 87.8 bits (216), Expect = 5e-16 Identities = 59/145 (40%), Positives = 78/145 (53%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + +L+RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 50 IEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [159][TOP] >UniRef100_C0BYR7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BYR7_9CLOT Length = 178 Score = 87.8 bits (216), Expect = 5e-16 Identities = 52/145 (35%), Positives = 82/145 (56%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ ++R+E+ + Y SIDLV +I+R+LRK K K RH +G N + Sbjct: 50 IEVTIPVKGNIIRSEQVSSDMYVSIDLVEEVIERQLRKYKNKLV--ARHQEGGNFRQ--- 104 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 E E E + DDE + +VRTK F + P+ +A Q++++ HDF+ F Sbjct: 105 ---------EFFESEYATEDDDEVK----IVRTKRFGIKPMYPEDACIQMDLLGHDFFVF 151 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E+N+VY+RK G +GLI P+ Sbjct: 152 CNADTDEVNVVYRRKNGTFGLIEPE 176 [160][TOP] >UniRef100_B9CNR8 Light-repressed protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CNR8_9ACTN Length = 195 Score = 87.8 bits (216), Expect = 5e-16 Identities = 51/150 (34%), Positives = 78/150 (52%) Frame = -1 Query: 469 VESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 290 +E V V V V +VR + YG+ID + + R+LRK K + D H + Sbjct: 52 LERKSVEVTVFVRNSVVRVVSSGDDMYGAIDEAAEKVTRQLRKYKTRIVDKHHHAQNTRG 111 Query: 289 LKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 110 S+ +E + TP +D +++L+ E KY D+ P+T EA+ Q +++ H Sbjct: 112 RALSQ--------EELANLIETPAEDLDDQLVRE----KYIDLLPMTEEEALVQTDLLGH 159 Query: 109 DFYAFRNEETGEINIVYKRKEGGYGLIIPK 20 DFY F N TG N++Y RK GGYG+I P+ Sbjct: 160 DFYVFVNSTTGLTNVIYHRKNGGYGIIKPR 189 [161][TOP] >UniRef100_P28368 Uncharacterized protein yvyD n=1 Tax=Bacillus subtilis RepID=YVYD_BACSU Length = 189 Score = 87.8 bits (216), Expect = 5e-16 Identities = 53/144 (36%), Positives = 79/144 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + + +R+E H E Y +IDL ++ ++R++RK K K R P L Sbjct: 53 VEVTIPMTDLALRSEVHNEDMYNAIDLATNKLERQIRKHKTKVNRKFREQGSPKYL---- 108 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 L +G D +I Q D EEE ++VR K F++ P+ EAI Q+ M+ H+F+ F Sbjct: 109 ----LANGLGSDT-DIAVQDDIEEEESLDIVRQKRFNLKPMDSEEAILQMNMLGHNFFVF 163 Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23 N ET N+VY+R +G YGLI P Sbjct: 164 TNAETNLTNVVYRRNDGKYGLIEP 187 [162][TOP] >UniRef100_C4V4X1 Ribosome-associated inhibitor A n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V4X1_9FIRM Length = 181 Score = 87.4 bits (215), Expect = 6e-16 Identities = 51/133 (38%), Positives = 73/133 (54%) Frame = -1 Query: 427 ILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGD 248 IL+R EEH+E Y SIDLV ++R++RK K K R G Sbjct: 61 ILLRGEEHSEDMYSSIDLVIEKLERQIRKQKTKLARRFRQ-----------------GGF 103 Query: 247 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 68 + + +E Q EE+ + VV+TK F + P+ V EAI Q+ +++H F+ FRN E+ E+N Sbjct: 104 KAEAVETFAQPIPEEDELYPVVKTKRFTLQPMDVQEAIMQMNLLNHHFFVFRNAESEEVN 163 Query: 67 IVYKRKEGGYGLI 29 IVY R +G Y LI Sbjct: 164 IVYGRHDGKYALI 176 [163][TOP] >UniRef100_C2ZFA1 Ribosome-associated factor Y n=2 Tax=Bacillus cereus RepID=C2ZFA1_BACCE Length = 180 Score = 87.4 bits (215), Expect = 6e-16 Identities = 58/145 (40%), Positives = 79/145 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + +L+RAEE Y +IDLV ++R++RK K K R KG + F Sbjct: 50 IEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF-- 106 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [164][TOP] >UniRef100_B7DUH5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DUH5_9BACL Length = 180 Score = 87.4 bits (215), Expect = 6e-16 Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 10/184 (5%) Frame = -1 Query: 541 TRAVKVVVVKEVAAVVNKLVAEA--------AVESIP--VVVVVEVEKILVRAEEHAETT 392 T A++ V K++A + EA AVE + V + V V ++ RAEE + Sbjct: 13 TAALQEYVDKKIARLTRYFDREADKQIYVTMAVEGLDHRVEMTVFVNGVIFRAEEKSPDM 72 Query: 391 YGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKD 212 Y SIDL + ++ ++ + KEK R +GP P + D + T D Sbjct: 73 YASIDLATDKLEEQIHRYKEKLNRRFR-ARGPR---------PQLKAADRDAVAET---D 119 Query: 211 DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGL 32 DE + VVR K F + P+ V EA+ Q+E++ HDF+ F N ET E+N+VY+R+ G YGL Sbjct: 120 DEIK----VVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRRRSGDYGL 175 Query: 31 IIPK 20 I P+ Sbjct: 176 IEPQ 179 [165][TOP] >UniRef100_UPI0001694CB6 ribosomal subunit interface protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694CB6 Length = 182 Score = 87.0 bits (214), Expect = 8e-16 Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 10/183 (5%) Frame = -1 Query: 541 TRAVKVVVVKEVAAVVN----KLVAEAAV------ESIPVVVVVEVEKILVRAEEHAETT 392 T A+K V K+++ + L +EA+V + V V + + L+RAE + Sbjct: 13 TEALKDYVDKKISKLDKYFEAPLASEASVTLSVIKDMHTVEVTIPISGALLRAEVKNDDM 72 Query: 391 YGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKD 212 Y SIDLV ++R++RK K K R G L E PS Sbjct: 73 YASIDLVVDKLERQIRKYKTKMNRRIRQEGGKRDLFVME-----PSS--------VANTV 119 Query: 211 DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGL 32 +EEE E+VRTK F + P+ V EAI Q+ MV H+F+ F N +T ++N+VYKR++G YGL Sbjct: 120 EEEEY--ELVRTKRFTLKPMDVEEAILQMNMVGHNFFVFANMDTDQVNVVYKREDGRYGL 177 Query: 31 IIP 23 I P Sbjct: 178 IEP 180 [166][TOP] >UniRef100_A9W9Y4 Ribosomal subunit interface protein n=2 Tax=Chloroflexus RepID=A9W9Y4_CHLAA Length = 197 Score = 87.0 bits (214), Expect = 8e-16 Identities = 46/137 (33%), Positives = 83/137 (60%), Gaps = 1/137 (0%) Frame = -1 Query: 427 ILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK-GPNRLKFSEVILPLPSG 251 +++RAEE A Y +ID V ++QR++ + K+K R + PN L +E + Sbjct: 65 VILRAEERAPDLYAAIDEVQEVLQRQIARYKDKYWRRSREQRRAPNGLTPAEEVA---IA 121 Query: 250 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 71 + E TP + E V+RTK F + P+ V +AI+Q+E++ H+F+ F++ ET ++ Sbjct: 122 EAEAAALATPTEVGSEA---RVIRTKTFRLRPMFVDDAIEQMELLGHNFFVFQDAETMQV 178 Query: 70 NIVYKRKEGGYGLIIPK 20 +++Y+R++G YG+IIP+ Sbjct: 179 SVLYRRRDGNYGVIIPE 195 [167][TOP] >UniRef100_Q3DA79 Ribosomal subunit interface protein n=2 Tax=Streptococcus agalactiae RepID=Q3DA79_STRAG Length = 184 Score = 87.0 bits (214), Expect = 8e-16 Identities = 53/147 (36%), Positives = 83/147 (56%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + ++ I +RAE+ ++ YGSIDLV I+R++RK K K R ++ S+ Sbjct: 54 VEVTILIDSITLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQ 108 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 V E E P DEE + + +VRTK ++ P+ V EA+ Q+E++ HDF+ + Sbjct: 109 VFTT--------EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIY 157 Query: 94 RNEETGEINIVYKRKEGGYGLIIPKGN 14 + E N++YKR++G GLI KGN Sbjct: 158 TDAEDNTTNVLYKREDGELGLIEAKGN 184 [168][TOP] >UniRef100_Q3CZ63 Ribosomal subunit interface protein n=6 Tax=Streptococcus agalactiae RepID=Q3CZ63_STRAG Length = 184 Score = 87.0 bits (214), Expect = 8e-16 Identities = 53/147 (36%), Positives = 83/147 (56%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + ++ I +RAE+ ++ YGSIDLV I+R++RK K K R ++ S+ Sbjct: 54 VEVTILIDSITLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQ 108 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 V E E P DEE + + +VRTK ++ P+ V EA+ Q+E++ HDF+ + Sbjct: 109 VFTT--------EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIY 157 Query: 94 RNEETGEINIVYKRKEGGYGLIIPKGN 14 + E N++YKR++G GLI KGN Sbjct: 158 TDAEDNTTNVLYKREDGELGLIEAKGN 184 [169][TOP] >UniRef100_C8WT44 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WT44_ALIAC Length = 180 Score = 87.0 bits (214), Expect = 8e-16 Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 10/184 (5%) Frame = -1 Query: 541 TRAVKVVVVKEVAAVVNKLVAEA--------AVESIP--VVVVVEVEKILVRAEEHAETT 392 T A++ V K++A + EA AVE + V + V V ++ RAEE + Sbjct: 13 TAALQDYVDKKIARLTRYFDREADKQIYVTMAVEGLDHRVEMTVFVNGVIFRAEEKSPDM 72 Query: 391 YGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKD 212 Y SIDL + ++ ++ + KEK R +GP P + D + T D Sbjct: 73 YASIDLATDKLEEQIHRYKEKLNRRFR-ARGPR---------PQLKAADRDAVAET---D 119 Query: 211 DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGL 32 DE + VVR K F + P+ V EA+ Q+E++ HDF+ F N ET E+N+VY+R+ G YGL Sbjct: 120 DEIK----VVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRRRSGDYGL 175 Query: 31 IIPK 20 I P+ Sbjct: 176 IEPQ 179 [170][TOP] >UniRef100_C6J2M0 Ribosomal subunit interface protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2M0_9BACL Length = 183 Score = 87.0 bits (214), Expect = 8e-16 Identities = 55/142 (38%), Positives = 78/142 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + +++RAE+ ++ Y SID V ++R++RK K K R N L + Sbjct: 52 VEVTIPLTGVVLRAEDRSDDMYASIDAVVDKLERQIRKHKTKINRKLRQKGVKNSLFVED 111 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + DE EEEL EVVRTK F + P+ V EAI Q+ MV H+F+ F Sbjct: 112 ATTGSVALDE-----------GEEEL--EVVRTKRFTLKPMDVEEAILQMNMVGHNFFVF 158 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 N +T E+N+VYKR +G YGLI Sbjct: 159 SNIDTKEVNVVYKRNDGKYGLI 180 [171][TOP] >UniRef100_C0FKQ0 Putative uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=C0FKQ0_9CLOT Length = 175 Score = 87.0 bits (214), Expect = 8e-16 Identities = 59/145 (40%), Positives = 80/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ ++RAEE + Y SIDLV II+R+L+K K K D K + FSE Sbjct: 50 IEVTIPVKGHIIRAEEQSTDMYVSIDLVEEIIERQLKKYKRKLID-----KKQAPVDFSE 104 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + + EE E D+E IE+V K F M P+ EA Q+E++ H FY F Sbjct: 105 LFV-----QEESE-------PDDEIKIEKV---KKFAMKPMDPEEACVQMELLGHSFYVF 149 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N ET E+N+VYKRK YGLI P+ Sbjct: 150 LNAETEEVNVVYKRKGHTYGLIEPE 174 [172][TOP] >UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AN97_9BACE Length = 179 Score = 87.0 bits (214), Expect = 8e-16 Identities = 52/157 (33%), Positives = 83/157 (52%) Frame = -1 Query: 490 KLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 311 K+ E + V + V+ ++R+E+ + Y SIDLV +I+R+L+K K K D Sbjct: 41 KVTLSVEKERQKIEVTIPVKGSIIRSEQVSNDMYVSIDLVEEVIERQLKKYKNKLID--- 97 Query: 310 HMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAID 131 K + F++ + D++ +++I +RTK FD+ P+ EA Sbjct: 98 --KQQDAAAFAQEYIDKEYVDDDADVKI--------------IRTKRFDVKPMDPEEACV 141 Query: 130 QLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20 Q+E++ H FY F N ET +IN+VYKRK YGLI P+ Sbjct: 142 QMELLGHSFYVFFNSETEQINVVYKRKGNTYGLIEPE 178 [173][TOP] >UniRef100_B9I248 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I248_POPTR Length = 115 Score = 87.0 bits (214), Expect = 8e-16 Identities = 52/105 (49%), Positives = 63/105 (60%), Gaps = 14/105 (13%) Frame = -1 Query: 355 RKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE--EELI---- 194 RKLRKIK+KE+DHGRHMKG N+LK E P+ E D ++ +KDD+ +EL Sbjct: 8 RKLRKIKDKESDHGRHMKGFNKLKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHL 64 Query: 193 --------EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 83 V TKYFDMPPLTV EAI +L VDH FY F + E Sbjct: 65 VTIHSIISSNAVHTKYFDMPPLTVDEAIVRLGNVDHAFYGFGHAE 109 [174][TOP] >UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z2Z4_EUBE2 Length = 175 Score = 86.7 bits (213), Expect = 1e-15 Identities = 51/145 (35%), Positives = 81/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ ++R+E+ + Y SIDLV +I+R+L+K K K D K N F++ Sbjct: 50 IEVTIPVKGNIIRSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVD-----KQQNAAAFAQ 104 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 E + D++E+ +++RTK F + P+ EA Q+E++ H+FY F Sbjct: 105 --------------EFVEKDYDDDEV--KIIRTKRFGIKPMDPEEACVQMELLGHNFYVF 148 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N ET E+N+VYKRK YGLI P+ Sbjct: 149 FNSETEEVNVVYKRKGNTYGLIEPE 173 [175][TOP] >UniRef100_B8CYM6 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYM6_HALOH Length = 184 Score = 86.7 bits (213), Expect = 1e-15 Identities = 49/144 (34%), Positives = 79/144 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +++R EE ++ Y SID V ++R++ K K K R K + ++ E Sbjct: 51 VEVTAYLNGLILRGEEESQDMYASIDGVLEKLERQVHKYKTKINRKIRERKQEFKKEYKE 110 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + +EI +E+E +VRTK F + P++V EA Q++++ HDF+ F Sbjct: 111 --------ERREEI----LNSEEDEFKPRIVRTKKFAIKPMSVEEAAMQMDLLGHDFFVF 158 Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23 N T ++N+VYKRK+G YGLI P Sbjct: 159 TNANTEQVNVVYKRKDGNYGLIEP 182 [176][TOP] >UniRef100_C5RGA6 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGA6_CLOCL Length = 180 Score = 86.7 bits (213), Expect = 1e-15 Identities = 49/145 (33%), Positives = 87/145 (60%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + ++ +++R EE E+ Y SIDLV ++ ++RK K K + K + L+F + Sbjct: 50 IEVTIPLKNVILRGEEATESMYASIDLVIDKLEGQMRKNKTKLSKQ----KYADSLRFYD 105 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + + E+ T + EEE ++V+TK F + P+ EA+ Q+E++ H+F+ F Sbjct: 106 AL-------SKGELAAT---EVEEE--SKIVKTKRFAIKPMNAEEAVLQMELLGHNFFVF 153 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 ++ET E+N+VYKRK+G +GLI P+ Sbjct: 154 MDDETSEVNVVYKRKDGNFGLIEPE 178 [177][TOP] >UniRef100_C2WEE0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus Rock3-44 RepID=C2WEE0_BACCE Length = 180 Score = 86.7 bits (213), Expect = 1e-15 Identities = 57/145 (39%), Positives = 80/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +L+RAEE Y +IDLV I+R++RK K K R P + Sbjct: 50 VEVTIPFTDLLLRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLREKGSPK----TT 105 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 IL E T ++ E++L E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 106 FILT--------ESAATLEEVKEDDL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E N+VY RK+G YGLI K Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180 [178][TOP] >UniRef100_B1B8N8 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B8N8_CLOBO Length = 184 Score = 86.7 bits (213), Expect = 1e-15 Identities = 48/145 (33%), Positives = 84/145 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +++RAE+ Y +ID+V ++R++RK K K + K + LKF Sbjct: 56 VEVTIPFNGVILRAEDSNSDMYAAIDIVLEKLERQIRKQKTKL----QRRKHGDALKFQF 111 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + +P KD+E+ + ++V+TK F + P++ EA+ Q+E++ H+F+ F Sbjct: 112 IPEYVP-------------KDNEDSIESKIVKTKRFAIKPMSKEEAVLQMELLGHNFFVF 158 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N +T E+N++YKRK+G YGLI P+ Sbjct: 159 TNGDTEEVNVLYKRKDGQYGLIEPE 183 [179][TOP] >UniRef100_A8W0Z3 Maf protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W0Z3_9BACI Length = 197 Score = 86.7 bits (213), Expect = 1e-15 Identities = 52/145 (35%), Positives = 82/145 (56%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V + + + K+L+RAEE Y ++DLV ++R++RK K K R +G + LK+ Sbjct: 66 VEITIPMPKLLLRAEEKHADMYAAVDLVIEKLERQIRKHKTKVN---RKFRGEDSLKYMF 122 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 P +EE TP D E+VRTK FD+ P+ EAI Q++M+ H+F+ F Sbjct: 123 KNELEPISEEE-----TPDDD------YEIVRTKRFDLKPMDAEEAILQMDMLGHNFFVF 171 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 + +G ++VY+R +G YGLI P+ Sbjct: 172 SDAVSGVTSVVYRRSDGKYGLIEPE 196 [180][TOP] >UniRef100_Q898W3 SSU ribosomal protein S30P n=1 Tax=Clostridium tetani RepID=Q898W3_CLOTE Length = 176 Score = 86.3 bits (212), Expect = 1e-15 Identities = 53/145 (36%), Positives = 84/145 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + +++R EE E Y SIDLV ++R++RK K K + M G + L+F Sbjct: 50 IEVTIPFNGVILRGEEANEDMYASIDLVIDKLERQIRKQKTKLQ---KRMHGDS-LRFQ- 104 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 +P GD K EE ++V+TK F + P++ EA+ Q+E++ H+F+ F Sbjct: 105 -FIPDYEGD----------KFKEES---KIVKTKRFAIKPMSSEEAVLQMELIGHNFFVF 150 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 + +TGE+N+VYKRK+G YGLI P+ Sbjct: 151 ESADTGEVNVVYKRKDGNYGLIEPE 175 [181][TOP] >UniRef100_Q1WSW6 Ribosome-associated factor Y n=1 Tax=Lactobacillus salivarius UCC118 RepID=Q1WSW6_LACS1 Length = 184 Score = 86.3 bits (212), Expect = 1e-15 Identities = 51/142 (35%), Positives = 81/142 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + +++RAEE + Y SIDLV+ ++R++RK K K R KG +F+ Sbjct: 54 VEVTIPLPYLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKNFEFA- 111 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 P DE++E+E + E+VRTK + P+ EA+ Q++M+ HDF+ + Sbjct: 112 -----PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGHDFFIY 157 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 + E G I IVY+R++G YGLI Sbjct: 158 EDAENGGIYIVYRRRDGRYGLI 179 [182][TOP] >UniRef100_C2C307 Ribosome-associated inhibitor protein Y n=1 Tax=Listeria grayi DSM 20601 RepID=C2C307_LISGR Length = 189 Score = 86.3 bits (212), Expect = 1e-15 Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 2/148 (1%) Frame = -1 Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR- 290 +S V V + + +++RAEE Y S+DL++ ++R++RK K K R KG + Sbjct: 50 KSAKVEVTIPLPNLVLRAEETNGDLYASVDLIADKLERQIRKHKTKVNRKFRD-KGSEKD 108 Query: 289 -LKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVD 113 FSE+ PS + + + +I E+VRTK F + P+ EA+ Q+ ++ Sbjct: 109 YFAFSEINDSTPSEETDSDYDI------------EIVRTKSFSLKPMDSEEAVLQMNLLG 156 Query: 112 HDFYAFRNEETGEINIVYKRKEGGYGLI 29 H+F+ F + ET NIVYKRK+G YGLI Sbjct: 157 HNFFVFNDAETNGTNIVYKRKDGKYGLI 184 [183][TOP] >UniRef100_C0CJV5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CJV5_9FIRM Length = 175 Score = 86.3 bits (212), Expect = 1e-15 Identities = 49/145 (33%), Positives = 82/145 (56%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ ++R+E+ + Y SIDLV +I+R+LRK K K D + Sbjct: 50 IEVTIPVKGNIIRSEQVSNDMYVSIDLVEEVIERQLRKYKTKIVDKEK------------ 97 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 +GD + I + ++E+E+ ++ RTK FD+ P+ +A Q+E++ H+F+ F Sbjct: 98 ------AGDHFQKAFIEKEYEEEDEV--KIQRTKKFDIKPMYPEDACVQMELLGHNFFVF 149 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N ET ++N+VYKRK YGLI P+ Sbjct: 150 CNAETDQVNVVYKRKGNTYGLIEPE 174 [184][TOP] >UniRef100_B9EAE7 Ribosomal subunit interface protein homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EAE7_MACCJ Length = 186 Score = 85.9 bits (211), Expect = 2e-15 Identities = 52/144 (36%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + ++ + +RAEE Y +++L+ ++R++RK K K NR KF E Sbjct: 54 VEVTIPLKDVTLRAEERHNDLYAAVNLIVEKLERQIRKHKTKV----------NR-KFRE 102 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEV--VRTKYFDMPPLTVFEAIDQLEMVDHDFY 101 G + D + P + EEE +E+ +R+K F + P+ EA+ Q+ M+ HDF+ Sbjct: 103 ------KGVKNDIFPVLPGTEPEEEKGDEIEIIRSKQFALKPMDAEEAVLQMNMLGHDFF 156 Query: 100 AFRNEETGEINIVYKRKEGGYGLI 29 F + ET E NIVYKRK+G YGLI Sbjct: 157 IFNDRETNETNIVYKRKDGKYGLI 180 [185][TOP] >UniRef100_A4XJ41 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XJ41_CALS8 Length = 182 Score = 85.9 bits (211), Expect = 2e-15 Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 2/153 (1%) Frame = -1 Query: 472 AVESIPVVVVVEVE--KILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 299 +VE I +V V + +++RAEE + Y +IDLV ++R++RK K K + + Sbjct: 43 SVEKIRHIVEVTIPFYGMILRAEEASNDMYSAIDLVVDSLERQIRKFKTKIAKRAKDAES 102 Query: 298 PNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 119 + F E E + + EE ++ +TK F + P++V EAI Q+ + Sbjct: 103 LRYMTFEE--------------EAQQETNQEENGEFKIAKTKRFPIKPMSVDEAILQMNL 148 Query: 118 VDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20 + H F+ F N++T ++N+VYKR +G YGLI P+ Sbjct: 149 LGHSFFVFLNQDTDKVNVVYKRNDGAYGLIEPE 181 [186][TOP] >UniRef100_C1P990 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Bacillus coagulans 36D1 RepID=C1P990_BACCO Length = 187 Score = 85.9 bits (211), Expect = 2e-15 Identities = 50/145 (34%), Positives = 88/145 (60%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V + + + ++++RAEE E Y +IDL++ ++R++RK K K R KG R E Sbjct: 54 VEITIPMPQVVLRAEETNEDMYAAIDLIADKLERQIRKHKTKVNRKLRE-KGSTR----E 108 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + +G +E + +K+++ EL ++VRTK+F++ P+ EA+ Q+ ++ H+F+ + Sbjct: 109 LFTTPDTGLKEKQA----RKEEDSEL--QIVRTKHFNLKPMDSEEAVLQMNLLGHNFFIY 162 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 + ET NIVY+RK+G YGLI K Sbjct: 163 TDAETNHTNIVYRRKDGKYGLIETK 187 [187][TOP] >UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CNW3_9FIRM Length = 186 Score = 85.9 bits (211), Expect = 2e-15 Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 4/149 (2%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK----ETDHGRHMKGPNRL 287 + V + V+ ++R+E+ ++ Y SIDLV +I+R+LRK K K H Sbjct: 50 IEVTIPVKGNIIRSEQTSDNMYVSIDLVEEVIERQLRKYKNKLVARSQGHPTSYTSTGNS 109 Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107 E E+DEI+I VRTK F + P+ +A Q+E++ H Sbjct: 110 FRKEFFETEDDAAEDDEIQI--------------VRTKKFGIKPMFPEDACIQMELLGHS 155 Query: 106 FYAFRNEETGEINIVYKRKEGGYGLIIPK 20 F+ F N ET E+N+VYKRK+G +GLI P+ Sbjct: 156 FFVFSNAETDEVNVVYKRKDGSFGLIEPE 184 [188][TOP] >UniRef100_A4ECY7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECY7_9ACTN Length = 194 Score = 85.9 bits (211), Expect = 2e-15 Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 22/192 (11%) Frame = -1 Query: 529 KVVVVKEVAAVVNKLVAEAA----VESIPVVVVVEVEK------------------ILVR 416 K V + A V++ + EA +E + V VV+ EK ++R Sbjct: 9 KTTVTDALRAHVDEKIGEALKVFDIEPMTVDVVLRYEKNPSNPNPAIVEVTARARGSVIR 68 Query: 415 AEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDE 236 EH Y +IDL + + R+LRK K K D NR + P ED Sbjct: 69 VAEHGADMYAAIDLSADKVTRQLRKFKTKVVD--------NRQGGASAADVAPVERVEDL 120 Query: 235 IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYK 56 ++ ++D++ L+ E K D+ P+T +A+ Q +++ HDFY F N TG IN+VY Sbjct: 121 ADLLLPEEDDDLLVRE----KVIDVTPMTEEQALVQTDLLGHDFYVFENATTGLINVVYH 176 Query: 55 RKEGGYGLIIPK 20 RK GGYG+I P+ Sbjct: 177 RKNGGYGIIKPR 188 [189][TOP] >UniRef100_C8WMZ8 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMZ8_9ACTN Length = 191 Score = 85.5 bits (210), Expect = 2e-15 Identities = 52/171 (30%), Positives = 96/171 (56%), Gaps = 2/171 (1%) Frame = -1 Query: 535 AVKVVVVKEVAAVVNKLVAEAAVESIPVV--VVVEVEKILVRAEEHAETTYGSIDLVSSI 362 ++KV+ + + A + V + P V V + + ++R EEH E Y +ID+ ++ Sbjct: 27 SMKVMDIDPLVAEIVLFVEKNPANPRPAVCEVTLRTKGHIIRVEEHEEDMYAAIDVAAAK 86 Query: 361 IQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVV 182 + R+LRK K K D R ++ + E I PS E +++ Q+ ++E VV Sbjct: 87 VVRQLRKYKTKVVD--RKLRAAD-----ETIRIEPSAAGELDVDGLMQELSDDE----VV 135 Query: 181 RTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29 R K + PLT EA+ +++++ HDF+A+ + ++G +N++Y+R +GGYGL+ Sbjct: 136 RVKTIEFEPLTEEEALVKIDLLGHDFFAYTDRDSGLVNVLYRRDDGGYGLL 186 [190][TOP] >UniRef100_C6LIX7 Ribosomal subunit interface protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LIX7_9FIRM Length = 176 Score = 85.5 bits (210), Expect = 2e-15 Identities = 53/146 (36%), Positives = 85/146 (58%), Gaps = 1/146 (0%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN-RLKFS 278 + V + V+ ++R+E+ + Y SIDLV +I+R+LRK K K +H +G N R +F Sbjct: 50 IEVTIPVKGNIIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKLI--AKHQEGSNFRREFI 107 Query: 277 EVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98 E +E+ +E EE+ ++RTK+F + P+ +A Q+E++ H+F+ Sbjct: 108 E---------KEETVE-------PEEV--NIIRTKHFGIKPMYPEDACIQMELLGHNFFV 149 Query: 97 FRNEETGEINIVYKRKEGGYGLIIPK 20 F N ET E+N+VYKRK YGLI P+ Sbjct: 150 FCNAETEEVNVVYKRKGNTYGLIEPE 175 [191][TOP] >UniRef100_C8P6S3 Ribosomal subunit interface protein n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P6S3_9LACO Length = 179 Score = 85.1 bits (209), Expect = 3e-15 Identities = 50/142 (35%), Positives = 80/142 (56%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + + +RAEE + YGS+DLV+ ++R++RK K K R KG L+F Sbjct: 54 VEVTIPLPYLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF-- 110 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 +PS D+ E+ ++VRTK + P+ EA+ Q++M+ HDF+ F Sbjct: 111 ----VPSDDDAASDEL------------KIVRTKQVSLKPMDPEEAVLQMDMLGHDFFVF 154 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 ++ ET +IVY+R++G YGLI Sbjct: 155 QDAETNGTSIVYRRRDGRYGLI 176 [192][TOP] >UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FVY1_9CLOT Length = 194 Score = 85.1 bits (209), Expect = 3e-15 Identities = 52/132 (39%), Positives = 77/132 (58%) Frame = -1 Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245 ++RAEE E Y +IDLV ++ +L+K K+K RH + + + S + Sbjct: 69 VIRAEESQENLYPAIDLVVDKLKIQLKKYKDKMQK--RHQENKS--------IRFDSPEI 118 Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65 D I +D E+EL + R K ++ P++ EA+ Q+E+V HDFY FRN+ET EI + Sbjct: 119 NDSILEEDLEDFEDELFI-IKRRKRINIKPMSEEEAVLQMELVGHDFYIFRNDETDEIAL 177 Query: 64 VYKRKEGGYGLI 29 VYKRK GGYG+I Sbjct: 178 VYKRKNGGYGII 189 [193][TOP] >UniRef100_A1HT12 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT12_9FIRM Length = 174 Score = 85.1 bits (209), Expect = 3e-15 Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 8/182 (4%) Frame = -1 Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVV--------VVVEVEKILVRAEEHAETTYG 386 T A+K V K V + A + I V V V V +L+R EE Y Sbjct: 13 TPALKDYVAKRVGKITKYFDALGEITVILTVEKGRHIVEVTVPVNGMLLRGEEATTDMYA 72 Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206 SIDLV +++++ K K K R ++ F ++ G+ ED Sbjct: 73 SIDLVIEKLEKQIEKYKTKIA---RKLRAGT---FKTDLVAGNGGESEDF---------- 116 Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26 VV+TK F + P+ V EAI Q+ +++HDFY F N ET ++N++Y+RK+G YGLI Sbjct: 117 -----RVVKTKRFPVKPMDVEEAIMQMNLINHDFYVFMNAETEQVNVIYRRKDGNYGLIE 171 Query: 25 PK 20 P+ Sbjct: 172 PE 173 [194][TOP] >UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J8B2_CHLRE Length = 286 Score = 85.1 bits (209), Expect = 3e-15 Identities = 60/163 (36%), Positives = 83/163 (50%), Gaps = 19/163 (11%) Frame = -1 Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272 V + + +VR E+ Y +IDLV I+ KL+KIKEK G P R E Sbjct: 130 VTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQKIKEKAISRGAW---PGRAGPKED 186 Query: 271 ILPLPSGDEED------EIEITPQKDDEEELIEE------------VVRTKYFDMP-PLT 149 + DEED E+++ Q D+EE ++ V+R+K + P+T Sbjct: 187 V------DEEDFQEYLKEVKMDTQLFDKEEQLQRQFAELNRIYPANVMRSKTVVLADPIT 240 Query: 148 VFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20 V EAID LE V H FY FR T + IVYKR+ GGYG+I+P+ Sbjct: 241 VEEAIDALEAVGHSFYVFREMTTDTVQIVYKRESGGYGVIVPQ 283 [195][TOP] >UniRef100_Q3AFQ6 Ribosomal subunit interface protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFQ6_CARHZ Length = 177 Score = 84.7 bits (208), Expect = 4e-15 Identities = 51/143 (35%), Positives = 80/143 (55%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V + V L+R EE + Y SIDLV ++R+ +K KEK ++ K Sbjct: 52 VTIPVAGYLLRGEEESPDMYSSIDLVVDKLERQAKKYKEKLYARFKNNKN---------- 101 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 + +G E E TP+ D+E + +V++K F + P++ EA Q+E++ H F+ F N Sbjct: 102 --IATG--EKSAETTPEPDNEIK----IVKSKRFAIKPMSPEEAAMQMELLGHSFFVFTN 153 Query: 88 EETGEINIVYKRKEGGYGLIIPK 20 +T EIN+VYKR++G YGLI P+ Sbjct: 154 ADTDEINVVYKRRDGKYGLIEPE 176 [196][TOP] >UniRef100_A0ALJ5 YfiA protein n=2 Tax=Listeria RepID=A0ALJ5_LISW6 Length = 187 Score = 84.7 bits (208), Expect = 4e-15 Identities = 51/142 (35%), Positives = 77/142 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + +++RAEE + Y SIDL+ ++R++RK K K R KG R F+ Sbjct: 54 VEVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRD-KGAERDYFAY 112 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 D TP +++E + E+VRTK F + P+ EA+ Q+ ++ H FY + Sbjct: 113 ----------SDVNGSTPPEENESDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVY 162 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 + ET NIVY RK+G YGLI Sbjct: 163 TDAETNGTNIVYSRKDGKYGLI 184 [197][TOP] >UniRef100_C6VLR5 Ribosomal protein S30EA n=3 Tax=Lactobacillus plantarum RepID=C6VLR5_LACPJ Length = 188 Score = 84.7 bits (208), Expect = 4e-15 Identities = 51/142 (35%), Positives = 79/142 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + +++RAEE + Y S+DLV+ ++R++RK K K R KG + F+ Sbjct: 54 VEVTIPLPYLVLRAEETSPDMYASVDLVTDKLERQIRKYKTKVNRKSRE-KGYKAIDFAA 112 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 DE D +++L +VVRTK + P+ EAI Q++M+ HDF+ + Sbjct: 113 T----------DETVAAADNDQDDKL--DVVRTKRVALKPMDNEEAILQMDMLGHDFFIY 160 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 + ET INIVY+R +G YGLI Sbjct: 161 EDAETDAINIVYRRNDGRYGLI 182 [198][TOP] >UniRef100_A8FHW6 Ribosome-associated inhibitor A n=2 Tax=Bacillus pumilus RepID=A8FHW6_BACP2 Length = 187 Score = 84.7 bits (208), Expect = 4e-15 Identities = 50/144 (34%), Positives = 76/144 (52%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + + +RAE H E Y ++DL +S ++R++RK K K R L Sbjct: 53 VEVTIPMTDLALRAEVHNEDMYNAVDLAASKLERQIRKHKTKVNRKFREQGAKKHL---- 108 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 G+ ++ + +DDEE E+VR K F++ P+ EAI Q+ M+ H F+ F Sbjct: 109 ----FAGGNGTADVAV---QDDEEIDETEIVRQKRFNLKPMDSEEAILQMNMLGHSFFVF 161 Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23 N ET N+VY+R +G YGLI P Sbjct: 162 TNAETNLTNVVYRRNDGKYGLIEP 185 [199][TOP] >UniRef100_A8U6N5 Ribosomal subunit interface protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U6N5_9LACT Length = 180 Score = 84.7 bits (208), Expect = 4e-15 Identities = 56/163 (34%), Positives = 92/163 (56%) Frame = -1 Query: 517 VKEVAAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKI 338 V E A VN + + ++ V V + + +++RAEE + YGS+DLVS ++R++RK Sbjct: 35 VPEATAHVN--LKTYSDKTAKVEVTIPLPYLVLRAEETSPDLYGSVDLVSDKLERQMRKY 92 Query: 337 KEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMP 158 K K R +G N V+ P+ G+E Q+ E+E+ +VRTK + Sbjct: 93 KTKIN---RRTRGSN-----VVVPPVLPGEE--------QESHEDEV--NIVRTKRLSLK 134 Query: 157 PLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29 P+ EA+ Q++M+ H+F+ F + +T +IVY+RK+G YGLI Sbjct: 135 PMDSEEAVLQMDMLGHNFFIFEDADTNGTSIVYRRKDGKYGLI 177 [200][TOP] >UniRef100_A5Z528 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z528_9FIRM Length = 179 Score = 84.7 bits (208), Expect = 4e-15 Identities = 53/145 (36%), Positives = 83/145 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + V+ ++RAEE ++ Y SID+V I+R+L K K K D + +K F+E Sbjct: 50 VEVTIPVKGRIIRAEEISDDMYVSIDMVEETIERQLVKYKNKIIDKKKSIKEA----FTE 105 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + D EDE DE+++ ++ +TK F + P+ EA ++E++ H+F+ F Sbjct: 106 TYI---EADYEDE--------DEDQI--KIKKTKRFGIKPMDPEEACVEMELLGHNFFVF 152 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N ET E+N+VYKRK YGLI P+ Sbjct: 153 LNAETEEVNVVYKRKGNTYGLIEPE 177 [201][TOP] >UniRef100_A9AY42 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AY42_HERA2 Length = 186 Score = 84.3 bits (207), Expect = 5e-15 Identities = 47/137 (34%), Positives = 78/137 (56%), Gaps = 1/137 (0%) Frame = -1 Query: 427 ILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-PLPSG 251 I++RAEE Y +++ V +QR++R+ KEK + +G R E+I PLP+ Sbjct: 65 IILRAEERDRELYAAVEAVHDNLQRQIRRFKEKH-----YRRGKLRRTAGEIIAAPLPAL 119 Query: 250 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 71 E D E+ +++R K + P+ EAI+Q+E++ H F+ FR+ ET +I Sbjct: 120 PE----------DAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFVFRDAETEKI 169 Query: 70 NIVYKRKEGGYGLIIPK 20 +VY+R +G YGLI+P+ Sbjct: 170 QVVYRRNDGNYGLIMPR 186 [202][TOP] >UniRef100_C2HJY8 Ribosome-associated inhibitor A n=1 Tax=Finegoldia magna ATCC 53516 RepID=C2HJY8_PEPMA Length = 179 Score = 84.3 bits (207), Expect = 5e-15 Identities = 52/164 (31%), Positives = 86/164 (52%) Frame = -1 Query: 514 KEVAAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIK 335 ++ V K +A VE V ++ + +++RAEE E +ID V + R++RK K Sbjct: 35 QQARVVFKKEKDKARVE----VTMILDKGVVLRAEESNEDIKTAIDKVEDALARQIRKHK 90 Query: 334 EKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPP 155 K + N ++F E + +D+E I +V+TK F + P Sbjct: 91 TKLQ---KRFTESNSIRF----------------EAVEENNDKEIPIGAIVKTKEFGIKP 131 Query: 154 LTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23 + EAI Q+E++DHDF+ F + +T +N+VYKRK+G YGL++P Sbjct: 132 MDKEEAIMQMELIDHDFFVFLDSKTNNVNVVYKRKDGNYGLLVP 175 [203][TOP] >UniRef100_C2ETD9 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus vaginalis ATCC 49540 RepID=C2ETD9_9LACO Length = 189 Score = 84.3 bits (207), Expect = 5e-15 Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 1/143 (0%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + + +RAEE + YGS+DLV+ ++R++RK K K R KG L+F Sbjct: 63 VEVTIPLPYLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGFKSLEF-- 119 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98 P DD E + ++VRTK + P+ EA+ Q++M+ HDF+ Sbjct: 120 ----------------VPTDDDAESQDDLKIVRTKQISLKPMDPEEAVLQMDMLGHDFFV 163 Query: 97 FRNEETGEINIVYKRKEGGYGLI 29 F++ ET +IVY+RK+G YGLI Sbjct: 164 FQDAETDGTSIVYRRKDGRYGLI 186 [204][TOP] >UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile QCD-23m63 RepID=UPI00017F5F53 Length = 183 Score = 84.0 bits (206), Expect = 7e-15 Identities = 47/141 (33%), Positives = 83/141 (58%) Frame = -1 Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272 V + V ++RAE+ E Y +ID+V + ++L+K K++ D + K ++F + Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDA 108 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 + L DE+++ D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+ Sbjct: 109 EINL--ADEQEDYG-----DENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159 Query: 91 NEETGEINIVYKRKEGGYGLI 29 N ++ EI +VYKR GGYG+I Sbjct: 160 NIDSDEIAVVYKRNNGGYGII 180 [205][TOP] >UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile RepID=C9XIR4_CLODI Length = 183 Score = 84.0 bits (206), Expect = 7e-15 Identities = 49/141 (34%), Positives = 83/141 (58%) Frame = -1 Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272 V + V ++RAE+ E Y +ID+V + ++L+K K++ D + K R + SE+ Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKSI-RFQDSEI 110 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 L DE+++ D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+ Sbjct: 111 NL----ADEQEDYG-----DENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159 Query: 91 NEETGEINIVYKRKEGGYGLI 29 N ++ EI +VYKR GGYG+I Sbjct: 160 NIDSDEIAVVYKRNNGGYGII 180 [206][TOP] >UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630 RepID=Q18CN1_CLOD6 Length = 183 Score = 84.0 bits (206), Expect = 7e-15 Identities = 47/141 (33%), Positives = 83/141 (58%) Frame = -1 Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272 V + V ++RAE+ E Y +ID+V + ++L+K K++ D + K ++F + Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDA 108 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 + L DE+++ D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+ Sbjct: 109 EINL--ADEQEDYG-----DENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159 Query: 91 NEETGEINIVYKRKEGGYGLI 29 N ++ EI +VYKR GGYG+I Sbjct: 160 NIDSDEIAVVYKRNNGGYGII 180 [207][TOP] >UniRef100_A5CYJ2 Ribosome-associated protein Y n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5CYJ2_PELTS Length = 175 Score = 84.0 bits (206), Expect = 7e-15 Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 8/182 (4%) Frame = -1 Query: 541 TRAVKVVVVKEVAAVVNKL--VAEAAV------ESIPVVVVVEVEKILVRAEEHAETTYG 386 T A+K VVK V + + +A V ES V V + V +++R EE Y Sbjct: 13 TDALKDYVVKRVGKLDKYIDNFGDAQVTLAVEKESHRVEVTIPVNGMILRGEESTGDMYT 72 Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206 SIDLV +++++ K K K G + D + P+++D Sbjct: 73 SIDLVVDKLEKQIEKYKGKLLKRGARF----------------TNDHKTAAPAVPEEEDG 116 Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26 L VRTK F + P+ V EAI Q+ ++ H F+ F N ET ++N+VY+RK+G YGLI Sbjct: 117 PRL----VRTKRFAIKPMPVEEAILQMNLLGHSFFVFSNAETEQVNVVYRRKDGNYGLIE 172 Query: 25 PK 20 P+ Sbjct: 173 PE 174 [208][TOP] >UniRef100_Q71WR7 Ribosomal subunit interface protein n=9 Tax=Listeria RepID=Q71WR7_LISMF Length = 187 Score = 84.0 bits (206), Expect = 7e-15 Identities = 51/142 (35%), Positives = 77/142 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + +++RAEE + Y SIDL+ ++R++RK K K R KG R F+ Sbjct: 54 VEVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRD-KGAERDYFAY 112 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 D TP +++E + E+VRTK F + P+ EA+ Q+ ++ H FY + Sbjct: 113 ----------SDVNGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVY 162 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 + ET NIVY RK+G YGLI Sbjct: 163 TDAETNGTNIVYSRKDGKYGLI 184 [209][TOP] >UniRef100_C1I442 30S ribosomal protein S30AE family n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I442_9CLOT Length = 178 Score = 84.0 bits (206), Expect = 7e-15 Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 8/181 (4%) Frame = -1 Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESI--------PVVVVVEVEKILVRAEEHAETTYG 386 T A+K ++ K+++ V E ++ V + + I++RAEE E Y Sbjct: 13 TPALKEMIEKKLSKVKRYFDPEVEAKTTLSVQKNKQKVEITIPFNGIILRAEESTEDMYK 72 Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206 SIDLV + ++R++RK + K + + L+F ++ DE+ ++ D+ Sbjct: 73 SIDLVVAKLERQIRKQRTKLS-----RRNNESLRFPQL----------DEVALS---DEV 114 Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26 E EVV+ K F + P++V EA+ Q+E+V H+F+ +++ E ++ +VYKRK+G YGL+ Sbjct: 115 VETNGEVVKVKRFGVKPMSVEEAVLQMELVGHNFFVYQDSEANKVCVVYKRKDGDYGLLE 174 Query: 25 P 23 P Sbjct: 175 P 175 [210][TOP] >UniRef100_C0FTS3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FTS3_9FIRM Length = 176 Score = 84.0 bits (206), Expect = 7e-15 Identities = 50/145 (34%), Positives = 81/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + ++ +R+E+ + Y SIDLV +I+R+L+K + K ++ + F Sbjct: 50 VEVTIPMKGSYIRSEQVSSDMYVSIDLVEEVIERQLKKYRTKLVTKQQNAAAVFKQDFL- 108 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 DE+ E D+EE+ +++RTK FDM P+ +A ++E++ HDFY F Sbjct: 109 --------DEKSE--------DDEEI--KIIRTKKFDMKPMYPEDACVEMELLGHDFYVF 150 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N ET ++N+VYKRK YGLI P+ Sbjct: 151 INAETEDVNVVYKRKGNTYGLIEPE 175 [211][TOP] >UniRef100_A6CQE4 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CQE4_9BACI Length = 189 Score = 84.0 bits (206), Expect = 7e-15 Identities = 51/142 (35%), Positives = 76/142 (53%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + +++RAEE E Y +IDL+ ++R++RK K K R P ++ Sbjct: 54 VEVTIPMPHLVLRAEERHEDMYAAIDLIVDKLERQIRKHKTKVNRKMREKGSPKEFFAAQ 113 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 L +E K E E +EVVRTK F++ P+ EAI Q+ ++ H F+ F Sbjct: 114 EGLTTSQLNE---------KARETEENDEVVRTKQFNLKPMDSEEAILQMNLLGHSFFIF 164 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 + ET NIVYKR++G YGLI Sbjct: 165 TDAETNATNIVYKRRDGKYGLI 186 [212][TOP] >UniRef100_Q9T0K5 Extensin-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9T0K5_ARATH Length = 760 Score = 84.0 bits (206), Expect = 7e-15 Identities = 39/56 (69%), Positives = 40/56 (71%), Gaps = 13/56 (23%) Frame = +1 Query: 409 PQPAPVFSPPPPPPPP-----VYSPPPP-----PPPVYSPPPPPPSPPPP---SPP 537 P P PV+SPPPPPPPP VYSPPPP PPPVYSPPPPPP PPPP SPP Sbjct: 458 PPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPP 513 Score = 83.6 bits (205), Expect = 9e-15 Identities = 36/47 (76%), Positives = 37/47 (78%), Gaps = 7/47 (14%) Frame = +1 Query: 415 PAPVFSPPPPPP--PPVYS-----PPPPPPPVYSPPPPPPSPPPPSP 534 P PV+SPPPPPP PPVYS PPPPPPPVYSPPPPPP PPPP P Sbjct: 432 PPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPP 478 Score = 83.2 bits (204), Expect = 1e-14 Identities = 39/57 (68%), Positives = 40/57 (70%), Gaps = 14/57 (24%) Frame = +1 Query: 409 PQPAPVFS--------PPPPPPPPVYS---PPPPPPPVYSPPPPPPSPPPP---SPP 537 P PAP+FS PPP PPPPVYS PPPPPPPVYSPPPPPP PPPP SPP Sbjct: 411 PPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPP 467 Score = 82.0 bits (201), Expect = 3e-14 Identities = 36/51 (70%), Positives = 37/51 (72%), Gaps = 8/51 (15%) Frame = +1 Query: 409 PQPAPVFSPPPPPP----PPVYSPPPPPPPVYSPP----PPPPSPPPPSPP 537 P P PV+SPPPPPP PPVYSPPPPPPP PP PPPPSPPPP PP Sbjct: 443 PPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPP 493 Score = 79.3 bits (194), Expect = 2e-13 Identities = 36/53 (67%), Positives = 37/53 (69%), Gaps = 9/53 (16%) Frame = +1 Query: 409 PQPAPVFSPPPP----PPPPVYSPPPPPP-----PVYSPPPPPPSPPPPSPPS 540 P P PV+SPPPP PPPPVYSPPPPPP PVYSPPPPP PP PPS Sbjct: 474 PPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPS 526 Score = 74.7 bits (182), Expect = 4e-12 Identities = 36/56 (64%), Positives = 37/56 (66%), Gaps = 13/56 (23%) Frame = +1 Query: 409 PQPAPVFSPPPPPP----PPVYSPPPPPPPVYSPPPPPPSP---------PPPSPP 537 P P PV+SPPPPPP PPVYS PPPPPVYS PPPPPSP PPP PP Sbjct: 489 PPPPPVYSPPPPPPPPPPPPVYS--PPPPPVYSSPPPPPSPAPTPVYCTRPPPPPP 542 Score = 68.9 bits (167), Expect = 2e-10 Identities = 29/49 (59%), Positives = 34/49 (69%), Gaps = 4/49 (8%) Frame = +1 Query: 400 LHAPQPAPVFSPPPPP----PPPVYSPPPPPPPVYSPPPPPPSPPPPSP 534 +++P P PV+S PPPP P PVY PPPPP +SPPPP SPPPP P Sbjct: 509 VYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEP 557 Score = 67.4 bits (163), Expect = 6e-10 Identities = 35/60 (58%), Positives = 38/60 (63%), Gaps = 14/60 (23%) Frame = +1 Query: 400 LHAPQPAPVFSPPP----PPPPPVYSPPPPPP-----PVY---SPPPPPPSPPPP--SPP 537 +++P P P PPP PPPPPVYS PPPPP PVY PPPPP SPPPP SPP Sbjct: 494 VYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPP 553 Score = 67.4 bits (163), Expect = 6e-10 Identities = 37/63 (58%), Positives = 39/63 (61%), Gaps = 19/63 (30%) Frame = +1 Query: 406 APQPAPVFSPPPPPP-------PPV--YSPPPPPPPV-YSPPPPPP----SPPPP----- 528 +P P PV+SPPPPPP PP YSPPPPPP V YS PPPPP SPPPP Sbjct: 600 SPPPTPVYSPPPPPPCIEPPPPPPCIEYSPPPPPPVVHYSSPPPPPVYYSSPPPPPVYYS 659 Query: 529 SPP 537 SPP Sbjct: 660 SPP 662 Score = 66.2 bits (160), Expect = 1e-09 Identities = 32/54 (59%), Positives = 33/54 (61%), Gaps = 13/54 (24%) Frame = +1 Query: 421 PVFSPPPP--PPPPVY---SPPPPPPPV--------YSPPPPPPSPPPPSPPSC 543 P SPPPP PPPP+Y SPPPPP PV YSPPPPPP PP PP C Sbjct: 571 PPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCIEPPPPPPC 624 Score = 66.2 bits (160), Expect = 1e-09 Identities = 29/46 (63%), Positives = 30/46 (65%), Gaps = 4/46 (8%) Frame = +1 Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPP----SPPPPSP 534 P P +SPPPPPP YS PPPPP YS PPPPP SPPPP P Sbjct: 621 PPPCIEYSPPPPPPVVHYSSPPPPPVYYSSPPPPPVYYSSPPPPPP 666 Score = 65.5 bits (158), Expect = 2e-09 Identities = 32/56 (57%), Positives = 34/56 (60%), Gaps = 12/56 (21%) Frame = +1 Query: 403 HAPQPA--PVFSPPPPPPP-------PVYSPPPPPPPVYSPPPPP---PSPPPPSP 534 H+P P P SPPPPP P PVYSPPPPPP + PPPPP SPPPP P Sbjct: 579 HSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCIEPPPPPPCIEYSPPPPPP 634 Score = 65.1 bits (157), Expect = 3e-09 Identities = 34/62 (54%), Positives = 38/62 (61%), Gaps = 7/62 (11%) Frame = +1 Query: 373 PNLYSHR*FLHAPQPAPVFS----PPPP--PPPPVYSPPPPPPPVYSPPPPP-PSPPPPS 531 P +YS +P P PV+ PPPP PPPP +SPPPP P YS PPPP SPPP S Sbjct: 515 PPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHS 574 Query: 532 PP 537 PP Sbjct: 575 PP 576 Score = 64.7 bits (156), Expect = 4e-09 Identities = 33/54 (61%), Positives = 33/54 (61%), Gaps = 11/54 (20%) Frame = +1 Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVY--SPPPPPP----SPPPP-----SPP 537 P P PV PPPPPVY PPPPPVY SPPPPPP SPPPP SPP Sbjct: 630 PPPPPVVHYSSPPPPPVYYSSPPPPPVYYSSPPPPPPVHYSSPPPPEVHYHSPP 683 Score = 63.9 bits (154), Expect = 7e-09 Identities = 32/58 (55%), Positives = 35/58 (60%), Gaps = 13/58 (22%) Frame = +1 Query: 406 APQPAPVFSPPPPPPPPVYSPPPPPPPVY--SPPP-------PPPSP----PPPSPPS 540 +P P PV+ PPPPP YS PPPPPPV+ SPPP PPPSP PP PPS Sbjct: 640 SPPPPPVYYSSPPPPPVYYSSPPPPPPVHYSSPPPPEVHYHSPPPSPVHYSSPPPPPS 697 Score = 60.1 bits (144), Expect = 1e-07 Identities = 28/54 (51%), Positives = 31/54 (57%), Gaps = 5/54 (9%) Frame = +1 Query: 397 FLHAPQPAPVFSPPPPPPPPV-YSPPPPPPPVYSPPPPPP----SPPPPSPPSC 543 + +P P PV+ PPPPPPV YS PPPP Y PPP P SPPPP C Sbjct: 647 YYSSPPPPPVYYSSPPPPPPVHYSSPPPPEVHYHSPPPSPVHYSSPPPPPSAPC 700 Score = 58.2 bits (139), Expect = 4e-07 Identities = 28/47 (59%), Positives = 30/47 (63%), Gaps = 4/47 (8%) Frame = +1 Query: 409 PQPAPVFSPPPPPPPPVYSPPP----PPPPVYSPPPPPPSPPPPSPP 537 P P P P PPPP P++S PP PPPP SPPPP SPPPP PP Sbjct: 401 PLPPPSL-PSPPPPAPIFSTPPTLTSPPPP--SPPPPVYSPPPPPPP 444 Score = 57.4 bits (137), Expect = 7e-07 Identities = 30/58 (51%), Positives = 33/58 (56%), Gaps = 14/58 (24%) Frame = +1 Query: 403 HAPQPAPVF--SPPP---------PPPPPVYSPPPPPPPVYSPPPPP---PSPPPPSP 534 H+P P+PV SPPP PPP PV PPPP V+ PPPP SPPPPSP Sbjct: 680 HSPPPSPVHYSSPPPPPSAPCEESPPPAPVVHHSPPPPMVHHSPPPPVIHQSPPPPSP 737 Score = 55.5 bits (132), Expect = 3e-06 Identities = 33/66 (50%), Positives = 34/66 (51%), Gaps = 23/66 (34%) Frame = +1 Query: 409 PQPAPVFSPPPP-----PPPPVY--SPPPP--------PPPVYSPPPP------PPSPPP 525 P P P SPPPP PP P Y SPPPP PPP +SPPPP PP PP Sbjct: 537 PPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPT 596 Query: 526 P--SPP 537 P SPP Sbjct: 597 PVSSPP 602 Score = 54.7 bits (130), Expect = 4e-06 Identities = 25/44 (56%), Positives = 30/44 (68%) Frame = +1 Query: 406 APQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537 +P+P PV +P PPP P PPPP P++S PP SPPPPSPP Sbjct: 393 SPRP-PVVTPLPPPSLP---SPPPPAPIFSTPPTLTSPPPPSPP 432 [213][TOP] >UniRef100_Q1GB46 Ribosomal protein S30EA n=2 Tax=Lactobacillus delbrueckii RepID=Q1GB46_LACDA Length = 185 Score = 83.6 bits (205), Expect = 9e-15 Identities = 49/145 (33%), Positives = 82/145 (56%) Frame = -1 Query: 463 SIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK 284 S V V + + +++RAEE + Y SID VS ++R++RK K + R KG Sbjct: 51 SAKVEVTIPLPYLVLRAEETTDDMYRSIDFVSEKLERQIRKYKTRVNRKSRE-KG----- 104 Query: 283 FSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 104 E +P + EE+++E P + ++VR K ++ P+ EAI Q++M++HDF Sbjct: 105 VEEFFIPEDAPVEEEKVEKAP--------MFKIVRNKRVNLKPMDPEEAILQMDMLEHDF 156 Query: 103 YAFRNEETGEINIVYKRKEGGYGLI 29 + F++ ET ++VY+R +G YGLI Sbjct: 157 FVFQDAETNGTSVVYRRNDGSYGLI 181 [214][TOP] >UniRef100_B7A6F1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A6F1_THEAQ Length = 186 Score = 83.6 bits (205), Expect = 9e-15 Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 2/164 (1%) Frame = -1 Query: 508 VAAVVNKLVAEAAVES-IPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 332 +A VV L VE V +++ L+R EE + Y +ID + ++ +L++ KE Sbjct: 37 MAKVVLSLAGSPHVEKRAKAEVQLDLPGGLLRVEEEDQDLYAAIDRMVDRLEIQLKRYKE 96 Query: 331 KETDHGRHM-KGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPP 155 + RH +GP P P + + + + EEE +VR K F+M P Sbjct: 97 RRFVGRRHTYQGP----------PPPEVRDMEAL-----RKPEEEEGPRIVRVKRFEMKP 141 Query: 154 LTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23 + EA+ Q+E + HDF+ FRN +T EIN+VY+RK+G YGLI P Sbjct: 142 MDPEEAVFQMEALGHDFFVFRNAKTDEINVVYRRKDGNYGLIEP 185 [215][TOP] >UniRef100_A3IC40 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. B14905 RepID=A3IC40_9BACI Length = 183 Score = 83.6 bits (205), Expect = 9e-15 Identities = 50/142 (35%), Positives = 76/142 (53%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + ++ + +RAEE Y ++DL+ ++R++RK K K R +G L F+ Sbjct: 54 VEVTIPMKNLTLRAEERHNDMYAAVDLIVDKLERQIRKHKTKVNRKFREREGAG-LYFAT 112 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + + +E+E I VRTK FD+ P+ EA+ Q+ M+ HDFY F Sbjct: 113 TQAVVDTTLDEEEYSI--------------VRTKQFDLKPMDQEEAVLQMNMLGHDFYVF 158 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 + E+ NIVYKRK+G YGLI Sbjct: 159 TDAESNGTNIVYKRKDGKYGLI 180 [216][TOP] >UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZI34_EUBR3 Length = 175 Score = 83.2 bits (204), Expect = 1e-14 Identities = 51/145 (35%), Positives = 80/145 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + + ++R+E+ + Y SIDLV +I+R+LRK + K + K++ Sbjct: 50 IEVTIPAKGHVIRSEQVSNDMYVSIDLVEEVIERQLRKYRTKISAK----------KYAP 99 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 I ++D +E DD E+ ++VRTK F M P+ +A Q+E+ HDF+ F Sbjct: 100 AIF------QDDFVEA----DDAEDEEIKIVRTKRFGMKPMYPEDACIQMELSGHDFFVF 149 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 RN E E+N+VYKRK YGLI P+ Sbjct: 150 RNAENDEVNVVYKRKGHTYGLIEPE 174 [217][TOP] >UniRef100_B5YI17 SSU ribosomal protein S30P n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YI17_THEYD Length = 173 Score = 83.2 bits (204), Expect = 1e-14 Identities = 43/142 (30%), Positives = 81/142 (57%) Frame = -1 Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269 V+++V+ L++AE E Y ++D V +++++ K KEK Sbjct: 52 VLLKVDGHLIQAEGKTEDLYSAVDQVVEKLEKQVLKYKEK-------------------- 91 Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89 + + ++++ I+ +E E + +V+ K FD+ P++ EA+DQLE++D DF+ F N Sbjct: 92 --VQNKNKKETIKYPSALSEEVETAKRIVKYKKFDLRPMSPEEAVDQLELLDKDFFIFIN 149 Query: 88 EETGEINIVYKRKEGGYGLIIP 23 +G++N++YKRK+G +GLI P Sbjct: 150 SFSGDVNVIYKRKDGNFGLIEP 171 [218][TOP] >UniRef100_B5YF17 Ribosomal subunit interface protein n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YF17_DICT6 Length = 179 Score = 83.2 bits (204), Expect = 1e-14 Identities = 52/143 (36%), Positives = 78/143 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V ++ +++A E + SIDLV ++ +L+++KEK D GR Sbjct: 55 VEVTIKANGRIIKASEANQDFRTSIDLVVDKLETQLKRLKEKLVDKGRRA---------- 104 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 E EI +K+ EE+ +VV+ K F + P+ V EAI Q+E++ HDF+ F Sbjct: 105 ----------ESIREILAEKEVEEK--PQVVKVKRFLLKPMDVEEAILQMELLGHDFFIF 152 Query: 94 RNEETGEINIVYKRKEGGYGLII 26 R+ ET I +VYKRK+G YGLII Sbjct: 153 RDAETDRIGVVYKRKDGKYGLII 175 [219][TOP] >UniRef100_A6TLE5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLE5_ALKMQ Length = 177 Score = 83.2 bits (204), Expect = 1e-14 Identities = 52/145 (35%), Positives = 78/145 (53%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + + + + ++RAEE E Y SID V + + +LRK K K N+ K E Sbjct: 50 IEITIPFDGSILRAEEKTEDMYASIDGVVNKLTSQLRKHKTKME---------NKTKKYE 100 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 I + I + D +E ++V+TK F M P+ EA+ Q+E++ H+FY F Sbjct: 101 TI-------RFENIPTYVEDVDSDE--SKIVKTKRFAMKPMHSEEAVLQMELIGHNFYMF 151 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N ET E+N+VYKRK+G YGLI P+ Sbjct: 152 ANAETDEVNVVYKRKDGNYGLIEPE 176 [220][TOP] >UniRef100_C9L411 Ribosomal subunit interface protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L411_RUMHA Length = 176 Score = 83.2 bits (204), Expect = 1e-14 Identities = 52/145 (35%), Positives = 80/145 (55%), Gaps = 1/145 (0%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ ++R+E+ + Y SIDLV II+R+LRK K K D + Sbjct: 50 IEVTIPVKGNIIRSEQVSSDMYVSIDLVEEIIERQLRKYKNKIIDKKQS----------- 98 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98 +G + + +E KD EE+ E +++RTK F P+ +A Q+E++ H+F+ Sbjct: 99 ------AGFQPEFVE----KDYEEDTNEIKIIRTKKFGFKPMYPEDACVQMELLGHNFFV 148 Query: 97 FRNEETGEINIVYKRKEGGYGLIIP 23 F N ET E+N+VYKRK YGLI P Sbjct: 149 FLNAETEEVNVVYKRKGNTYGLIEP 173 [221][TOP] >UniRef100_C5QQC2 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus epidermidis M23864:W1 RepID=C5QQC2_STAEP Length = 191 Score = 83.2 bits (204), Expect = 1e-14 Identities = 47/158 (29%), Positives = 89/158 (56%) Frame = -1 Query: 502 AVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 323 AV + V + + + V + ++ + +RAEE + Y IDL+++ ++R++RK K + Sbjct: 38 AVAHVKVKTYSNSATKIEVTIPLKDVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRVN 97 Query: 322 DHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 143 R +G + +EV P +E+ + D++ ++ E++R+K F + P+ Sbjct: 98 RKHRD-RGDQEVFVAEVQEATP-----EEVSGAEEPDNDSDI--EIIRSKQFSLKPMDSE 149 Query: 142 EAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29 EA+ Q+ ++ HDF+ F + ET +IVY+RK+G YGLI Sbjct: 150 EAVLQMNLLGHDFFIFTDRETDGTSIVYRRKDGKYGLI 187 [222][TOP] >UniRef100_C2ECJ0 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2ECJ0_9LACO Length = 186 Score = 83.2 bits (204), Expect = 1e-14 Identities = 51/142 (35%), Positives = 81/142 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + +++RAEE + Y SIDLV+ ++R++RK K K R KG +F Sbjct: 54 VEVTIPLPYLVLRAEETSPDMYASIDLVTDKLERQIRKHKTKLNRKSRE-KGFKTFEF-- 110 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 +P+ D P++ E+ E+VRTK + P+ EAI Q++M+ HDF+ + Sbjct: 111 ----VPTAD--------PKEAAAEDKKFEIVRTKSVSLKPMDAEEAILQMDMLGHDFFIY 158 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 + ET I+IVY+R++G YGLI Sbjct: 159 EDAETSGIDIVYRRRDGRYGLI 180 [223][TOP] >UniRef100_A5VIF9 Sigma 54 modulation protein / SSU ribosomal protein S30P n=6 Tax=Lactobacillus reuteri RepID=A5VIF9_LACRD Length = 182 Score = 83.2 bits (204), Expect = 1e-14 Identities = 52/142 (36%), Positives = 82/142 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + + +RAEE + YGSIDLV+ ++R++RK K K R KG L+F Sbjct: 54 VEVTIPLPYLTLRAEETSNDMYGSIDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF-- 110 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 +PS ++ T +DDE + +VRTK + P+ EA+ Q++M+ H+F+ F Sbjct: 111 ----IPSDNDG-----TDGQDDELK----IVRTKQVSLKPMDPEEAVLQMDMLGHNFFIF 157 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 ++ ET +IVY+R +G YGLI Sbjct: 158 QDAETNGTSIVYRRNDGRYGLI 179 [224][TOP] >UniRef100_B2GAI6 Ribosomal subunit interface protein n=3 Tax=Lactobacillus fermentum RepID=B2GAI6_LACF3 Length = 181 Score = 83.2 bits (204), Expect = 1e-14 Identities = 48/142 (33%), Positives = 78/142 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + + +RAEE + YGS+DLV+ ++R++RK K K R KG L+F + Sbjct: 54 VEVTIPLPYLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGYKNLEFVD 112 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 TP ++ E ++VRTK + P+ EA+ Q++M+ HDF+ + Sbjct: 113 ----------------TPSEEVEASDSLKIVRTKQIPLKPMDSEEAVLQMDMLGHDFFVY 156 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 ++ ET +IVY+R +G YGLI Sbjct: 157 QDAETNGTSIVYRRNDGRYGLI 178 [225][TOP] >UniRef100_C0WUJ7 Ribosome-associated inhibitor protein Y n=3 Tax=Lactobacillus RepID=C0WUJ7_LACBU Length = 194 Score = 83.2 bits (204), Expect = 1e-14 Identities = 50/142 (35%), Positives = 80/142 (56%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + + +RAEE + Y S+DLV+ ++R++RK K K R KG L+F Sbjct: 61 VEVTIPLPFLTLRAEELSNDLYASVDLVTDKLERQIRKYKTKVNRKSRE-KGFKNLEF-- 117 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 +P+ D+ T D+ + +VVRTK + P+ EAI Q++M+ HDF+ + Sbjct: 118 ----VPNDDQ------TTSDSDDNQSQFDVVRTKRLALKPMDNEEAILQMDMLGHDFFIY 167 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 + +T I+IVY+R +G YGLI Sbjct: 168 EDADTSNIDIVYRRNDGRYGLI 189 [226][TOP] >UniRef100_C0WCZ2 Sigma-54 modulation protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCZ2_9FIRM Length = 180 Score = 83.2 bits (204), Expect = 1e-14 Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 8/182 (4%) Frame = -1 Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIP--------VVVVVEVEKILVRAEEHAETTYG 386 T A+K V K+V + + + ++ V + V I++RA+E +E Y Sbjct: 13 TPALKDYVEKKVETITKQFKTVGEITAVMRIERNKHIVEITVPASGIVLRAQEGSENMYA 72 Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206 SID I+R++ K K R MK F + +P SGD E+ D E Sbjct: 73 SIDNCVEKIERQIHKYKT------RLMKRKYN-NFRDAAVPPVSGDVEEA-----SADGE 120 Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26 + V RTK + M P+ V EAI Q+ M++HDF+ F N+ET + +VY+RK G YGLI Sbjct: 121 FK----VARTKTYAMRPMNVQEAIMQMNMLNHDFFVFFNDETESMAVVYRRKAGDYGLIN 176 Query: 25 PK 20 P+ Sbjct: 177 PE 178 [227][TOP] >UniRef100_B6G1P8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1P8_9CLOT Length = 190 Score = 83.2 bits (204), Expect = 1e-14 Identities = 51/141 (36%), Positives = 80/141 (56%) Frame = -1 Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272 V++ V +R EE + Y +IDLV + R++ K K+K + G +++ Sbjct: 60 VMIPNVNGHTIRVEEEQDNLYPAIDLVCDKLSRQIIKYKDK---FKTRVPGNFSIRYE-- 114 Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92 G EE E+ + ++ E +IE R K F++ P+++ EAI Q+ + DHDFY F+ Sbjct: 115 ------GIEELAQELDYEVEEPEVVIE---RRKKFNLKPMSIEEAILQMNLTDHDFYMFK 165 Query: 91 NEETGEINIVYKRKEGGYGLI 29 + E+ EI +VYKRKEGGYGLI Sbjct: 166 DRESFEICLVYKRKEGGYGLI 186 [228][TOP] >UniRef100_B6FRG1 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRG1_9CLOT Length = 178 Score = 83.2 bits (204), Expect = 1e-14 Identities = 52/145 (35%), Positives = 78/145 (53%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ ++R+E+ ++ Y SIDLV +I+R+LRK K K R +G N SE Sbjct: 50 IEVTIPVKGHIIRSEQVSDDMYVSIDLVEEVIERQLRKYKNKLI--ARQQEGGNFQ--SE 105 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 DEI+I +RTK F + P+ +A Q+E++ H+F+ F Sbjct: 106 FFEAEQDTSNNDEIKI--------------IRTKRFGIKPMFPEDACVQMELLGHNFFVF 151 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N ET E+N+VYKRK YGLI P+ Sbjct: 152 SNAETDEVNVVYKRKNNTYGLIEPE 176 [229][TOP] >UniRef100_A7B7M8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B7M8_RUMGN Length = 185 Score = 83.2 bits (204), Expect = 1e-14 Identities = 48/147 (32%), Positives = 83/147 (56%), Gaps = 2/147 (1%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ ++R+E+ ++ Y S+DLV +I+R+LRK K N+L Sbjct: 50 IEVTIPVKGNIIRSEQTSDDMYVSVDLVEEVIERQLRKYK-------------NKLVARS 96 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEV--VRTKYFDMPPLTVFEAIDQLEMVDHDFY 101 P SG + + + +D+ + +E+ VRTK F + P+ +A Q++++ H F+ Sbjct: 97 QGHPTASGSGNNFKKEFFESEDDTSVDDEIRIVRTKRFGIKPMYPEDACIQMDLLGHAFF 156 Query: 100 AFRNEETGEINIVYKRKEGGYGLIIPK 20 F N ET E+N+VYKRK+G +GLI P+ Sbjct: 157 VFCNAETDEVNVVYKRKDGSFGLIEPE 183 [230][TOP] >UniRef100_A4L2S0 Ribosome-associated protein Y n=1 Tax=Lactobacillus reuteri RepID=A4L2S0_LACRE Length = 182 Score = 83.2 bits (204), Expect = 1e-14 Identities = 52/142 (36%), Positives = 82/142 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + + +RAEE + YGSIDLV+ ++R++RK K K R KG L+F Sbjct: 54 VEVTIPLPYLTLRAEETSNDMYGSIDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF-- 110 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 +PS ++ T +DDE + +VRTK + P+ EA+ Q++M+ H+F+ F Sbjct: 111 ----IPSDNDG-----TDGQDDELK----IVRTKQVSLKPMDPEEAVLQMDMLGHNFFIF 157 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 ++ ET +IVY+R +G YGLI Sbjct: 158 QDAETNGTSIVYRRNDGRYGLI 179 [231][TOP] >UniRef100_B9RZI2 Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZI2_RICCO Length = 829 Score = 83.2 bits (204), Expect = 1e-14 Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 5/52 (9%) Frame = +1 Query: 400 LHAPQPAPVFSPPPP-PPPPVYSPPPP----PPPVYSPPPPPPSPPPPSPPS 540 +H+P P PV+SPPPP PPPPV+SPPPP PPPV+SPPPP SPPPPSPPS Sbjct: 679 VHSPPP-PVYSPPPPSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPSPPS 729 Score = 77.8 bits (190), Expect = 5e-13 Identities = 35/46 (76%), Positives = 36/46 (78%), Gaps = 5/46 (10%) Frame = +1 Query: 415 PAPVFSPPPP---PPPPVYSPPPP--PPPVYSPPPPPPSPPPPSPP 537 P P SPPPP PPPPVYSPPPP PPPV+SPPPP SPPPPSPP Sbjct: 650 PPPTQSPPPPVNSPPPPVYSPPPPSPPPPVHSPPPPVYSPPPPSPP 695 Score = 77.0 bits (188), Expect = 8e-13 Identities = 37/56 (66%), Positives = 42/56 (75%), Gaps = 10/56 (17%) Frame = +1 Query: 400 LHAPQPAPVFSPPPPP----PPPVYSPPPP----PPPVYSPPPPPPSPPPP--SPP 537 +H+P P PV+SPPPPP PPPV+SPPPP PPP+YSPPPP SPPPP SPP Sbjct: 734 MHSPPP-PVYSPPPPPVRSPPPPVHSPPPPVHSPPPPIYSPPPPRFSPPPPRFSPP 788 Score = 74.3 bits (181), Expect = 5e-12 Identities = 37/57 (64%), Positives = 41/57 (71%), Gaps = 11/57 (19%) Frame = +1 Query: 400 LHAPQPAPVFSPPPP---PPPPVYSPPPP-----PPPVYSPPPPPPSPPPP---SPP 537 +H+P P PV SPPPP PPPPVYSPPPP PPP++SPPPP SPPPP SPP Sbjct: 698 VHSPPP-PVHSPPPPVHSPPPPVYSPPPPSPPSPPPPMHSPPPPVYSPPPPPVRSPP 753 Score = 73.6 bits (179), Expect = 9e-12 Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 9/67 (13%) Frame = +1 Query: 364 SRTPNLYSHR*FLHAPQPAPVFSPPPP---PPPPVYSPPPP----PPPVYSPPPPPPSPP 522 S P ++S +++P P PV SPPPP PPPPV+SPPPP PPP +SPPPP SPP Sbjct: 729 SPPPPMHSPPPPVYSPPPPPVRSPPPPVHSPPPPVHSPPPPIYSPPPPRFSPPPPRFSPP 788 Query: 523 PP--SPP 537 PP SPP Sbjct: 789 PPTSSPP 795 Score = 73.2 bits (178), Expect = 1e-11 Identities = 39/69 (56%), Positives = 46/69 (66%), Gaps = 11/69 (15%) Frame = +1 Query: 364 SRTPNLYSHR*FLHAPQPAPVFSPPPP----PPPPVYSPPPP-----PPPVYSPPPPPPS 516 S P ++S +H+P P PV+SPPPP PPPP++SPPPP PPPV SPPPP S Sbjct: 700 SPPPPVHSPPPPVHSPPP-PVYSPPPPSPPSPPPPMHSPPPPVYSPPPPPVRSPPPPVHS 758 Query: 517 PPPP--SPP 537 PPPP SPP Sbjct: 759 PPPPVHSPP 767 Score = 65.5 bits (158), Expect = 2e-09 Identities = 31/50 (62%), Positives = 31/50 (62%), Gaps = 7/50 (14%) Frame = +1 Query: 409 PQPAPVFSPPPP---PPPPVYSPPPP----PPPVYSPPPPPPSPPPPSPP 537 P P SP PP PPPP SPPPP PPPVYSPPPP P PP SPP Sbjct: 634 PPTTPEQSPSPPGQSPPPPTQSPPPPVNSPPPPVYSPPPPSPPPPVHSPP 683 Score = 60.8 bits (146), Expect = 6e-08 Identities = 30/51 (58%), Positives = 31/51 (60%), Gaps = 10/51 (19%) Frame = +1 Query: 415 PAPVFSPPPP------PPPPVYSPPPP----PPPVYSPPPPPPSPPPPSPP 537 P+P PPP P PP SPPPP PPPV SPPPP SPPPPSPP Sbjct: 626 PSPPGQSPPPTTPEQSPSPPGQSPPPPTQSPPPPVNSPPPPVYSPPPPSPP 676 Score = 56.2 bits (134), Expect = 1e-06 Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 20/78 (25%) Frame = +1 Query: 364 SRTPNLYSHR*FLHAPQPAPVFSPPPP---PPPPVYSPPPP-----PPPVYSPPPP---- 507 S P ++S +H+P P P++SPPPP PPPP +SPPPP P P + PPP Sbjct: 751 SPPPPVHSPPPPVHSPPP-PIYSPPPPRFSPPPPRFSPPPPTSSPPPTPTVAAPPPEDFI 809 Query: 508 -PP-------SPPPPSPP 537 PP SPPPP P Sbjct: 810 LPPNIGFQYSSPPPPMFP 827 [232][TOP] >UniRef100_Q9RVE7 Protein DR_1082 n=1 Tax=Deinococcus radiodurans RepID=UA82_DEIRA Length = 191 Score = 83.2 bits (204), Expect = 1e-14 Identities = 51/142 (35%), Positives = 80/142 (56%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + V ++RAEEH Y +ID S +++R+LRK K R+MK R + Sbjct: 56 VEVQLNVPGGIIRAEEHHADMYAAIDKASDVLERQLRKFKT------RYMK--QRQEGRP 107 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 LP P+ E + DD E E+VR K F++ P++ +A+ Q+E + HDFY F Sbjct: 108 EPLPGPAEAEVNAQGSGAAMDDVSEFHPEIVRQKRFELRPMSAEDAVVQMEALGHDFYVF 167 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 ++ + G+ +VY+R++G YGLI Sbjct: 168 QDLQ-GQTGVVYRRRDGHYGLI 188 [233][TOP] >UniRef100_UPI0001B5A5D6 ribosomal subunit interface protein n=1 Tax=Staphylococcus aureus subsp. aureus str. CF-Marseille RepID=UPI0001B5A5D6 Length = 163 Score = 82.8 bits (203), Expect = 1e-14 Identities = 47/158 (29%), Positives = 87/158 (55%) Frame = -1 Query: 502 AVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 323 AV + V + + + V + ++ + +RAEE + Y IDL+++ ++R++RK K + Sbjct: 11 AVAHVKVKTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRIN 70 Query: 322 DHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 143 R +G + +E+ E E ++ D+ E+ E++R+K F + P+ Sbjct: 71 RKSRD-RGDQEVFVAEL-------QEMQETQVDNDAYDDNEI--EIIRSKEFSLKPMDSE 120 Query: 142 EAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29 EA+ Q+ ++ HDF+ F + ET +IVY+RK+G YGLI Sbjct: 121 EAVLQMNLLGHDFFVFTDRETDGTSIVYRRKDGKYGLI 158 [234][TOP] >UniRef100_UPI0001794B34 hypothetical protein CLOSPO_00786 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=UPI0001794B34 Length = 175 Score = 82.8 bits (203), Expect = 1e-14 Identities = 44/145 (30%), Positives = 76/145 (52%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + +++R EE E Y SID+V ++R++RK K K Sbjct: 50 IEVTIPFHGVILRGEETTEDMYASIDMVIDKLERQIRKQKTK------------------ 91 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 L D + P + E ++V+TK F M P++ EA+ Q+E++ H+F+ + Sbjct: 92 --LQRNIHDGSLRFQYIPDYESGENKETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVY 149 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 +N +T E+N++Y+RK+G YGLI P+ Sbjct: 150 QNADTEEVNVIYRRKDGNYGLIEPE 174 [235][TOP] >UniRef100_B1HN67 Hypothetical yvyD protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HN67_LYSSC Length = 183 Score = 82.8 bits (203), Expect = 1e-14 Identities = 50/142 (35%), Positives = 75/142 (52%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + ++ + +RAEE Y ++DL+ ++R++RK K K R +G L F+ Sbjct: 54 VEVTIPMKNLTLRAEERHNDMYAAVDLIVDKLERQIRKHKTKVNRKFREREGAG-LYFAT 112 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + +E+E I VRTK FD+ P+ EA+ Q+ M+ HDFY F Sbjct: 113 TQAVADTTLDEEEYSI--------------VRTKQFDLKPMDQEEAVLQMNMLGHDFYVF 158 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 + E+ NIVYKRK+G YGLI Sbjct: 159 TDAESNGTNIVYKRKDGKYGLI 180 [236][TOP] >UniRef100_Q62PU3 YvyD n=2 Tax=Bacillus licheniformis ATCC 14580 RepID=Q62PU3_BACLD Length = 187 Score = 82.8 bits (203), Expect = 1e-14 Identities = 53/144 (36%), Positives = 80/144 (55%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + + + +RAE H E Y +IDL ++ ++R++RK K K R KG ++ F+E Sbjct: 54 VEVTIPMTDLSLRAEVHHEDMYNAIDLATNKLERQIRKHKTKVNRKFRE-KGSSKHVFAE 112 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + I Q+D E+E +VVR K F++ P+ EAI Q+ M+ H F+ F Sbjct: 113 ----------GNGIGTAVQEDIEDEQ-PQVVRQKRFNLKPMDNEEAILQMNMLGHSFFVF 161 Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23 N ET N+VY+R +G YGLI P Sbjct: 162 TNAETNLTNVVYRRNDGKYGLIEP 185 [237][TOP] >UniRef100_C6JE61 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE61_9FIRM Length = 175 Score = 82.8 bits (203), Expect = 1e-14 Identities = 49/145 (33%), Positives = 78/145 (53%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + V+ ++R+E+ + Y SIDLV +I+R+LRK K K D K F + Sbjct: 50 IEVTIPVKGNIIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVD-----KQQAAANFQK 104 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 L KD +E+ +++RTK F + P+ +A Q+E++ H+F+ F Sbjct: 105 AYL---------------DKDYDEDEEVKIIRTKKFGIKPMYPEDACVQMELLGHNFFVF 149 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 N ET ++N+VYKRK YGLI P+ Sbjct: 150 YNAETEQVNVVYKRKGNTYGLIEPE 174 [238][TOP] >UniRef100_C0GF81 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF81_9FIRM Length = 177 Score = 82.8 bits (203), Expect = 1e-14 Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 3/147 (2%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIK---EKETDHGRHMKGPNRLK 284 V V +E +++RAEE Y SID V ++R++ K K ++ G +K N L Sbjct: 50 VEVTAAIEGMILRAEESTGDMYASIDSVVDKLERQIAKYKTRINRKARQGGGIKAMNEL- 108 Query: 283 FSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 104 PQ +DEEE +VV+TK F + P+ V EAI Q+ ++ HDF Sbjct: 109 --------------------PQVEDEEE-DWDVVKTKRFVVKPMPVEEAILQMNLLGHDF 147 Query: 103 YAFRNEETGEINIVYKRKEGGYGLIIP 23 + F N + ++N++Y+RK+G YGLI P Sbjct: 148 FVFMNADNEDVNVIYRRKDGKYGLIEP 174 [239][TOP] >UniRef100_A7FQJ2 Ribosomal subunit interface protein n=7 Tax=Clostridium botulinum RepID=A7FQJ2_CLOB1 Length = 175 Score = 82.8 bits (203), Expect = 1e-14 Identities = 44/145 (30%), Positives = 76/145 (52%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + +++R EE E Y SID+V ++ ++RK K K Sbjct: 50 IEVTIPFHGVILRGEETTEDMYASIDMVIDKLEGQVRKQKTK------------------ 91 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 L D + P + EE ++V+TK F M P++ EA+ Q+E++ H+F+ + Sbjct: 92 --LQRKIHDGSLRFQYIPDYESEENKETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVY 149 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 +N +T E+N++Y+RK+G YGLI P+ Sbjct: 150 QNADTEEVNVIYRRKDGNYGLIEPE 174 [240][TOP] >UniRef100_A8SVF0 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SVF0_9FIRM Length = 175 Score = 82.8 bits (203), Expect = 1e-14 Identities = 49/145 (33%), Positives = 83/145 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + V + ++ ++RAE+ ++ Y SIDLV +I+R++ K ++K D +++ N E Sbjct: 50 IEVTIPMKGHIIRAEQVSDDMYVSIDLVVEVIERQVTKHRKKLIDKEQNVAYLNEAFVDE 109 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 I +++D+I+I VRTK F + P+ +A Q++++ H+FY F Sbjct: 110 DI------EDDDDIKI--------------VRTKKFAVKPMYPEDACIQMDLLGHNFYVF 149 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 RN ET E+N+VYKRK YGLI P+ Sbjct: 150 RNAETDEVNVVYKRKGNTYGLIEPE 174 [241][TOP] >UniRef100_Q2YSH7 Uncharacterized protein SAB0704 n=35 Tax=Staphylococcus aureus RepID=Y704_STAAB Length = 190 Score = 82.8 bits (203), Expect = 1e-14 Identities = 47/158 (29%), Positives = 87/158 (55%) Frame = -1 Query: 502 AVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 323 AV + V + + + V + ++ + +RAEE + Y IDL+++ ++R++RK K + Sbjct: 38 AVAHVKVKTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRIN 97 Query: 322 DHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 143 R +G + +E+ E E ++ D+ E+ E++R+K F + P+ Sbjct: 98 RKSRD-RGDQEVFVAEL-------QEMQETQVDNDAYDDNEI--EIIRSKEFSLKPMDSE 147 Query: 142 EAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29 EA+ Q+ ++ HDF+ F + ET +IVY+RK+G YGLI Sbjct: 148 EAVLQMNLLGHDFFVFTDRETDGTSIVYRRKDGKYGLI 185 [242][TOP] >UniRef100_P13983 Extensin n=1 Tax=Nicotiana tabacum RepID=EXTN_TOBAC Length = 620 Score = 82.8 bits (203), Expect = 1e-14 Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 3/65 (4%) Frame = +1 Query: 349 TFSE*SRTPNLYSHR*FLHAPQPAPVFSPPPP---PPPPVYSPPPPPPPVYSPPPPPPSP 519 T+++ P YS ++P P P +SPPPP PPPP Y+ PPPPPP YSPPPP SP Sbjct: 422 TYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSP 481 Query: 520 PPPSP 534 PPPSP Sbjct: 482 PPPSP 486 Score = 73.2 bits (178), Expect = 1e-11 Identities = 36/63 (57%), Positives = 37/63 (58%), Gaps = 19/63 (30%) Frame = +1 Query: 406 APQPAPVFSPPPP------------PPPPVYSPPPPP-----PPVYSPPPPPPSPPPP-- 528 A P P +SPPPP PPPPVYSPPPPP PP Y PPPPP SPPPP Sbjct: 323 AYSPPPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSF 382 Query: 529 SPP 537 SPP Sbjct: 383 SPP 385 Score = 71.6 bits (174), Expect = 3e-11 Identities = 36/68 (52%), Positives = 36/68 (52%), Gaps = 25/68 (36%) Frame = +1 Query: 409 PQPAPVFSPPPPP--PPPVYSPPPP-------------PPPVYSPPPPP----------P 513 P P P FSPPPP PPP YSPPPP PPPVYSPPPPP P Sbjct: 311 PTPTPTFSPPPPAYSPPPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLP 370 Query: 514 SPPPPSPP 537 PPP SPP Sbjct: 371 PPPPSSPP 378 Score = 71.2 bits (173), Expect = 4e-11 Identities = 50/112 (44%), Positives = 55/112 (49%), Gaps = 11/112 (9%) Frame = +1 Query: 235 FHPPHPPRVVAI*PH*ISTYWVPSCGDHDQSLFP*SFS----TFSE*SRTPNLYSHR*FL 402 + PP PP P TY P S P SFS T+ + P YS Sbjct: 353 YSPPPPPSYSPPPP----TYLPPP---PPSSPPPPSFSPPPPTYEQSPPPPPAYS----- 400 Query: 403 HAPQPAP-VFSPPPP---PPPPVYSPPPPPPPVYSPPPPPPSPPPP---SPP 537 P PAP +SPPPP PPPP Y+ PPP PP YSPPPP SPPPP SPP Sbjct: 401 -PPLPAPPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPP 451 Score = 69.3 bits (168), Expect = 2e-10 Identities = 34/60 (56%), Positives = 37/60 (61%), Gaps = 13/60 (21%) Frame = +1 Query: 397 FLHAPQPAPVFSPPPP----PPPPVYSPPPP----PPPVYSPPPPPP---SPPPP--SPP 537 + P P +SPPPP PPPP YSPPPP PPP Y+ PPPPP SPPPP SPP Sbjct: 423 YAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPP 482 Score = 68.9 bits (167), Expect = 2e-10 Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 17/65 (26%) Frame = +1 Query: 397 FLHAPQPAPVFSPPPP-----PPPPVYSPPPP---------PPPVYSPPPPPPSPPP--- 525 + +PQP+P +SPPPP PP P+YSPPPP P P +SPPPP SPPP Sbjct: 272 YAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTPTPTFSPPPPAYSPPPTYS 331 Query: 526 PSPPS 540 P PP+ Sbjct: 332 PPPPT 336 Score = 67.0 bits (162), Expect = 8e-10 Identities = 32/54 (59%), Positives = 34/54 (62%), Gaps = 13/54 (24%) Frame = +1 Query: 415 PAPVFSPPPPP----PPPVYSPPPPP----PPVYSPPPP-----PPSPPPPSPP 537 P PV+SPPPPP PPP Y PPPPP PP +SPPPP PP PP SPP Sbjct: 349 PPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPP 402 Score = 67.0 bits (162), Expect = 8e-10 Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 11/53 (20%) Frame = +1 Query: 415 PAPVFSPPPP------PPPPVYSPPP-----PPPPVYSPPPPPPSPPPPSPPS 540 P P ++ PPP PPPP YSPPP PPPP YSPPPP + PPP PP+ Sbjct: 419 PPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPT 471 Score = 65.5 bits (158), Expect = 2e-09 Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 22/75 (29%) Frame = +1 Query: 379 LYSHR*FLHAPQPAPVFSPPPP----------PPPPVYSPPPP-------PPPVYSPP-- 501 +YS +++P P P +SPPPP PPPP +SPPPP PPP YSPP Sbjct: 345 IYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLP 404 Query: 502 -PPPPSPPPP--SPP 537 PP SPPPP SPP Sbjct: 405 APPTYSPPPPTYSPP 419 Score = 63.9 bits (154), Expect = 7e-09 Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 13/57 (22%) Frame = +1 Query: 409 PQPAPVFSPPPP-------------PPPPVYSPPPPPPPVYSPPPPPPSPPPPSPPS 540 PQP P +SPPPP PPPP YSPPPP P +YSPPPP SP PP P+ Sbjct: 260 PQP-PTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSP-IYSPPPPAYSPSPPPTPT 314 Score = 62.0 bits (149), Expect = 3e-08 Identities = 32/58 (55%), Positives = 34/58 (58%), Gaps = 14/58 (24%) Frame = +1 Query: 403 HAP---QPAPVFSPPPPP----PPPVYSPPPP-------PPPVYSPPPPPPSPPPPSP 534 HAP QP+P+ PP P PP YSPPPP P P YSPPPP SPPPPSP Sbjct: 239 HAPPTHQPSPLRHLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSP 296 Score = 62.0 bits (149), Expect = 3e-08 Identities = 32/74 (43%), Positives = 38/74 (51%), Gaps = 26/74 (35%) Frame = +1 Query: 397 FLHAPQPAPVFSPP-----PPPPPPVYSPPPPP----PPVYSPPPP-------------- 507 + P P P +SPP PPPP P+YSPPPP PP +SPPPP Sbjct: 462 YAQPPPPPPTYSPPPPAYSPPPPSPIYSPPPPQVQPLPPTFSPPPPRRIHLPPPPHRQPR 521 Query: 508 PPSP---PPPSPPS 540 PP+P PPSPP+ Sbjct: 522 PPTPTYGQPPSPPT 535 Score = 61.6 bits (148), Expect = 4e-08 Identities = 32/62 (51%), Positives = 35/62 (56%), Gaps = 7/62 (11%) Frame = +1 Query: 373 PNLYSHR*FLHAPQPAPVFSPPPP-----PPPPVYSPPPPPPPVYSPPPPPPSPPPP--S 531 P YS ++P P PPPP PPPP YS PPPP P+YSPPPP P PP S Sbjct: 445 PPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYS-PPPPSPIYSPPPPQVQPLPPTFS 503 Query: 532 PP 537 PP Sbjct: 504 PP 505 Score = 60.1 bits (144), Expect = 1e-07 Identities = 36/69 (52%), Positives = 40/69 (57%), Gaps = 14/69 (20%) Frame = +1 Query: 373 PNLYSHR*FLHAPQPA-PVFSPPPP-----PPPPVYSPPP----PPPPVYSPPPPPPSPP 522 P YS + P P+ P++SPPPP PPP YSPPP PPPP SPPPP SPP Sbjct: 327 PPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPS-YSPPPPTYLPPPPPSSPPPPSFSPP 385 Query: 523 PP----SPP 537 PP SPP Sbjct: 386 PPTYEQSPP 394 Score = 60.1 bits (144), Expect = 1e-07 Identities = 30/58 (51%), Positives = 34/58 (58%), Gaps = 15/58 (25%) Frame = +1 Query: 409 PQPAPVFSPPPP---PPPPVYSPPP------PPPPVYSPPPP------PPSPPPPSPP 537 P P+P++SPPPP P PP +SPPP PPPP P PP PPSPP SPP Sbjct: 482 PPPSPIYSPPPPQVQPLPPTFSPPPPRRIHLPPPPHRQPRPPTPTYGQPPSPPTFSPP 539 Score = 57.4 bits (137), Expect = 7e-07 Identities = 26/48 (54%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +1 Query: 403 HAPQPAPVFSPPPPPPPPVYSPPPP--PPPVYSPPPPPPSPPPPSPPS 540 H P P ++ PPP P +YSP P PPP YSPPPP P PSPPS Sbjct: 175 HGHPPPPTYAQPPPTP--IYSPSPQVQPPPTYSPPPPTHVQPTPSPPS 220 Score = 54.7 bits (130), Expect = 4e-06 Identities = 23/41 (56%), Positives = 24/41 (58%), Gaps = 5/41 (12%) Frame = +1 Query: 406 APQPAPVFSPPPP-----PPPPVYSPPPPPPPVYSPPPPPP 513 AP P + SPPPP PP P Y PP PP YSPP PPP Sbjct: 572 APPPRQIHSPPPPHRQPRPPTPTYGQPPSPPTTYSPPSPPP 612 [243][TOP] >UniRef100_Q97F93 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Clostridium acetobutylicum RepID=Q97F93_CLOAB Length = 174 Score = 82.4 bits (202), Expect = 2e-14 Identities = 48/145 (33%), Positives = 79/145 (54%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + +++R EE Y SID+V ++R++RK K K K + LKF Sbjct: 50 VEVTIPFNGVILRGEETNNDMYASIDIVGDKLERQVRKQKTKL----ERRKYSDSLKFQN 105 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 + P EE+ E+V+TK F + P++ EA+ ++E++ H+F+ F Sbjct: 106 I----------------PDYHKEEQE-PEIVKTKRFAIKPMSEEEAVLEMELLGHNFFVF 148 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 +N ++ E+N+VYKRK+G YGLI P+ Sbjct: 149 QNGDSNEVNVVYKRKDGNYGLIEPE 173 [244][TOP] >UniRef100_C7XW84 Sigma 54 modulation protein/SSU ribosomal protein S30P n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XW84_9LACO Length = 179 Score = 82.4 bits (202), Expect = 2e-14 Identities = 49/146 (33%), Positives = 80/146 (54%) Frame = -1 Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287 ++ V V + + + +RAEE + Y SIDLV+ ++R++RK K K R KG L Sbjct: 50 KTFKVEVTIPLPYLTLRAEETSNDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGLKNL 108 Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107 +F +P G E+D ++I VRTK + P+ EA+ Q++M+ HD Sbjct: 109 EF----VPGDDGTEDDSLKI--------------VRTKEISLKPMDSEEAVLQMDMLGHD 150 Query: 106 FYAFRNEETGEINIVYKRKEGGYGLI 29 F+ F++ +T ++VY+R +G YGLI Sbjct: 151 FFIFQDADTNGTSVVYRRNDGRYGLI 176 [245][TOP] >UniRef100_C6Q126 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q126_9CLOT Length = 175 Score = 82.4 bits (202), Expect = 2e-14 Identities = 51/145 (35%), Positives = 83/145 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 V V + I++R EE + Y SIDLV ++ ++RK K K + + LKF Sbjct: 50 VEVTIPFNGIILRGEEENDDMYASIDLVVDKLEGQIRKQKTKL----QRRTHSDSLKFQ- 104 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 +P ++ P KD EE ++V+TK F + P++ EA+ Q+E++ H+F+ + Sbjct: 105 -FIP----------DLEP-KDKEES---KIVKTKRFAIKPMSSEEAVLQMELLGHNFFVY 149 Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20 ++ E GE+N+VYKRK+G YGLI P+ Sbjct: 150 KDAENGEVNVVYKRKDGNYGLIEPE 174 [246][TOP] >UniRef100_C5NVZ2 Ribosome-associated factor Y n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVZ2_9BACL Length = 181 Score = 82.4 bits (202), Expect = 2e-14 Identities = 48/142 (33%), Positives = 81/142 (57%) Frame = -1 Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275 + + V + + +RAEE E Y ++DLV ++R++RK K K GR KG F+E Sbjct: 54 IEITVPLRGVTLRAEETNEDLYAAVDLVVDKLERQMRKHKTKINRKGRE-KG-----FAE 107 Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95 EI +T + ++ EE ++ + K + P+T EA+ Q+E++ HDF+AF Sbjct: 108 ------------EIILTSELEEAEETTLDLGKVKQLKVEPMTREEAVFQMELLGHDFFAF 155 Query: 94 RNEETGEINIVYKRKEGGYGLI 29 + T EI++VYKR++ GYG++ Sbjct: 156 LDNTTNEISVVYKRRDTGYGVL 177 [247][TOP] >UniRef100_B7GE66 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GE66_PHATR Length = 209 Score = 82.4 bits (202), Expect = 2e-14 Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 22/195 (11%) Frame = -1 Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVV----------------VVVEVEKILVRAE 410 T A+ V K + +NKL + A++ V+ VV ++ + Sbjct: 23 TPALVEHVNKRIGGQINKLASNGAIQECDVILSVSKNPKVKNGHRVEVVTNLKGTSIICH 82 Query: 409 EHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFSEVILPLPSGDEEDE 236 + Y SID S + RKL K K+ HG G + ++ E + ED Sbjct: 83 NESPDMYASIDAASHALYRKLCKYKDNRVAGWHGGEKMGNDIMEVLENL--------EDV 134 Query: 235 IEITPQKDDEEELIEE---VVRTKYFDMP-PLTVFEAIDQLEMVDHDFYAFRNEETGEIN 68 E T EE + E + + K FD+ P++V EA+ L+ +DHDFY FRN ET EI+ Sbjct: 135 SEYTATPVAEEYVDPEAPTITKVKNFDLTKPMSVQEAVFALDYIDHDFYVFRNAETNEIS 194 Query: 67 IVYKRKEGGYGLIIP 23 +VYKR GG GL+ P Sbjct: 195 VVYKRHVGGIGLVEP 209 [248][TOP] >UniRef100_P47995 Uncharacterized protein Sca_0400 n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=Y400_STACT Length = 188 Score = 82.4 bits (202), Expect = 2e-14 Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 2/150 (1%) Frame = -1 Query: 472 AVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN 293 A S + V + + + +RAEE + Y IDL+++ ++R++RK K + N Sbjct: 48 ANSSTKIEVTIPLNDVTLRAEERNDDLYAGIDLITNKLERQVRKYKTRV----------N 97 Query: 292 RLKFSEVIL-PLPSGDEED-EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 119 R K E P P+ E E + KDDE E+I R+K F + P+ EA+ Q+++ Sbjct: 98 RKKRKESEHEPFPATPETPPETAVDHDKDDEIEII----RSKQFSLKPMDSEEAVLQMDL 153 Query: 118 VDHDFYAFRNEETGEINIVYKRKEGGYGLI 29 + HDF+ F + ET +IVY+RK+G YGLI Sbjct: 154 LGHDFFIFNDRETDGTSIVYRRKDGKYGLI 183 [249][TOP] >UniRef100_Q9CHS8 Putative uncharacterized protein ygdA n=1 Tax=Lactococcus lactis subsp. lactis RepID=Q9CHS8_LACLA Length = 185 Score = 82.0 bits (201), Expect = 3e-14 Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 1/162 (0%) Frame = -1 Query: 511 EVAAVVN-KLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIK 335 EV A VN K+ +E + V V + + + +RAE+ ++ Y SID V ++R++RK K Sbjct: 37 EVTAYVNLKVYSEKRAK---VEVTLPAKNVTLRAEDTSQDMYSSIDFVEEKLERQIRKYK 93 Query: 334 EKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPP 155 + R+ P F + PL DE E + ++VRTK+ + P Sbjct: 94 TRMNRKPRNAV-PTGQAFGDEFAPLEKADEVAEDHV------------DIVRTKHVALKP 140 Query: 154 LTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29 + EA+ Q++M+ HDFY F + ++ ++VY+R +G YGLI Sbjct: 141 MDAEEAVLQMDMLGHDFYVFTDADSNGTHVVYRRTDGRYGLI 182 [250][TOP] >UniRef100_A5VB72 Filamentous haemagglutinin family outer membrane protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VB72_SPHWW Length = 1531 Score = 82.0 bits (201), Expect = 3e-14 Identities = 34/45 (75%), Positives = 34/45 (75%), Gaps = 2/45 (4%) Frame = +1 Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPP--SPPPPSPP 537 P P PV PPPPPPPPV PPPPPPP SPPPPPP SPPPP PP Sbjct: 1269 PPPPPVSPPPPPPPPPVSPPPPPPPPPVSPPPPPPPVSPPPPPPP 1313 Score = 75.5 bits (184), Expect = 2e-12 Identities = 31/39 (79%), Positives = 31/39 (79%) Frame = +1 Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPP 525 P P P SPPPPPPPP SPPPPPPPV SPPPPPP PPP Sbjct: 1279 PPPPPPVSPPPPPPPPPVSPPPPPPPV-SPPPPPPPPPP 1316 Score = 73.6 bits (179), Expect = 9e-12 Identities = 30/39 (76%), Positives = 30/39 (76%), Gaps = 4/39 (10%) Frame = +1 Query: 433 PPPPPPPPVYSPPPPPPPVYSPPPPPP----SPPPPSPP 537 PPPPPPPPV PPPPPPP SPPPPPP SPPPP PP Sbjct: 1266 PPPPPPPPVSPPPPPPPPPVSPPPPPPPPPVSPPPPPPP 1304 Score = 70.1 bits (170), Expect = 1e-10 Identities = 28/38 (73%), Positives = 28/38 (73%) Frame = +1 Query: 424 VFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537 V PPPPPPPP SPPPPPPP PPPPP PPP SPP Sbjct: 1262 VSPPPPPPPPPPVSPPPPPPPPPVSPPPPPPPPPVSPP 1299