[UP]
[1][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T7E3_SOYBN
Length = 291
Score = 208 bits (530), Expect = 2e-52
Identities = 110/141 (78%), Positives = 122/141 (86%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
+VRAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK E + LP E
Sbjct: 139 VVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVEQLPV--E 196
Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
EDEI ++PQ +EEE I+EVVRTKYFDMPPLTV EAI+QLE VDHDFY FRNEETGEINI
Sbjct: 197 EDEI-LSPQ--EEEESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINI 253
Query: 64 VYKRKEGGYGLIIPKGNGEVD 2
VYKRKEGGYGLI+PKG+GE +
Sbjct: 254 VYKRKEGGYGLIVPKGDGEAE 274
[2][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984F94
Length = 298
Score = 200 bits (509), Expect = 5e-50
Identities = 101/141 (71%), Positives = 118/141 (83%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
+VRAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG NRLK + PL
Sbjct: 146 VVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPLV---- 201
Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
E+E ++ PQK+D + LI E+VRTKYFDMPPLTV EA++QLE VDHDF+ FRNEETGEINI
Sbjct: 202 EEEADVVPQKEDGD-LINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINI 260
Query: 64 VYKRKEGGYGLIIPKGNGEVD 2
+YKRK GGYGLIIPK NG+ +
Sbjct: 261 LYKRKAGGYGLIIPKENGKTE 281
[3][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QEV5_VITVI
Length = 230
Score = 200 bits (509), Expect = 5e-50
Identities = 101/141 (71%), Positives = 118/141 (83%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
+VRAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG NRLK + PL
Sbjct: 78 VVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPLV---- 133
Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
E+E ++ PQK+D + LI E+VRTKYFDMPPLTV EA++QLE VDHDF+ FRNEETGEINI
Sbjct: 134 EEEADVVPQKEDGD-LINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINI 192
Query: 64 VYKRKEGGYGLIIPKGNGEVD 2
+YKRK GGYGLIIPK NG+ +
Sbjct: 193 LYKRKAGGYGLIIPKENGKTE 213
[4][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
Length = 306
Score = 198 bits (503), Expect = 2e-49
Identities = 105/141 (74%), Positives = 115/141 (81%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
+VRAEE AET Y SIDLVSSIIQRKLRKIKEKE+DHGRHMKG NRLK E P+P E
Sbjct: 154 VVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVRE---PVPQVVE 210
Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
D E++ Q + E+ IEEVVRTK+FDMPPLTV EAI+QLE VDHDFY FRNEETGEINI
Sbjct: 211 GDADEVSQQ--EVEDSIEEVVRTKFFDMPPLTVSEAIEQLENVDHDFYGFRNEETGEINI 268
Query: 64 VYKRKEGGYGLIIPKGNGEVD 2
VYKRK GGYGLIIPKGN E +
Sbjct: 269 VYKRKAGGYGLIIPKGNDEAE 289
[5][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
Length = 231
Score = 195 bits (495), Expect = 2e-48
Identities = 99/141 (70%), Positives = 115/141 (81%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
+VRAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG NRLK E + + D+
Sbjct: 78 VVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQVVVEDD 137
Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
DE+ + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE V HDFY FR+EETGEINI
Sbjct: 138 ADEVS----QQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINI 193
Query: 64 VYKRKEGGYGLIIPKGNGEVD 2
+YKRK GGYGLIIPKGNGE +
Sbjct: 194 IYKRKAGGYGLIIPKGNGEAE 214
[6][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PHY3_POPTR
Length = 306
Score = 195 bits (495), Expect = 2e-48
Identities = 99/141 (70%), Positives = 115/141 (81%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
+VRAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG NRLK E + + D+
Sbjct: 153 VVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQVVVEDD 212
Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
DE+ + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE V HDFY FR+EETGEINI
Sbjct: 213 ADEVS----QQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINI 268
Query: 64 VYKRKEGGYGLIIPKGNGEVD 2
+YKRK GGYGLIIPKGNGE +
Sbjct: 269 IYKRKAGGYGLIIPKGNGEAE 289
[7][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SEK8_RICCO
Length = 311
Score = 192 bits (488), Expect = 1e-47
Identities = 98/141 (69%), Positives = 115/141 (81%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
++RAEE AET Y SIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK E + P D+
Sbjct: 156 VIRAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVAE-PVKDD 214
Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
DE++ D++E+ I+EVVRTKYFDMPPLTV EAI+QL+ VDHDFY FRNEETGEINI
Sbjct: 215 TDEVDGV-LGDEDEDYIDEVVRTKYFDMPPLTVSEAIEQLKNVDHDFYGFRNEETGEINI 273
Query: 64 VYKRKEGGYGLIIPKGNGEVD 2
+YKRK GGYG+IIPK NG+ +
Sbjct: 274 IYKRKAGGYGIIIPKENGKAE 294
[8][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
thaliana RepID=Q9FLV3_ARATH
Length = 365
Score = 188 bits (477), Expect = 2e-46
Identities = 93/142 (65%), Positives = 117/142 (82%), Gaps = 1/142 (0%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
+VRAEE AET Y IDLVS+IIQRKLRKIKEK++DHGRHMKG NRLK E ++ D
Sbjct: 207 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 266
Query: 244 EDEIEITP-QKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 68
ED + + ++++E++LI+E+VRTK F+MPPLTV EA++QLE+V HDFY F+NEETGEIN
Sbjct: 267 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 326
Query: 67 IVYKRKEGGYGLIIPKGNGEVD 2
IVYKRKEGGYGLIIPK +G+ +
Sbjct: 327 IVYKRKEGGYGLIIPKKDGKAE 348
[9][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RR30_SPIOL
Length = 302
Score = 180 bits (456), Expect = 7e-44
Identities = 93/138 (67%), Positives = 109/138 (78%), Gaps = 3/138 (2%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE---VILPLPS 254
++RAEE AE+ Y SIDLVSSIIQRKLRKIK+K +DHGRHMKG NR K + V +
Sbjct: 143 VIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHMKGFNRSKVRDPEPVRITREE 202
Query: 253 GDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 74
EE E P ++++ IEEVVRTKYFDMPPLT+ EA++QLE VDHDFYAFRNEETG+
Sbjct: 203 VLEEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGD 262
Query: 73 INIVYKRKEGGYGLIIPK 20
INI+YKRKEGGYGLIIPK
Sbjct: 263 INILYKRKEGGYGLIIPK 280
[10][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
RepID=C9EFD1_SOLTU
Length = 280
Score = 179 bits (453), Expect = 2e-43
Identities = 94/149 (63%), Positives = 117/149 (78%), Gaps = 8/149 (5%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS--EVILPLPSG 251
++RAEE AE+ YGSID+VSSIIQRKLRKIKEK++DHGRHMKG +RLK EV+L
Sbjct: 125 VIRAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEVLLV---- 180
Query: 250 DEEDEIEITPQKDDEEE------LIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
++++E PQ+++ E+ + EVVR K FDMPPL+V EAI+QLE VDHDFY FRN
Sbjct: 181 --QEDLETLPQEEEVEDDDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRN 238
Query: 88 EETGEINIVYKRKEGGYGLIIPKGNGEVD 2
EETGEINIVY+RKEGGYGLIIPK +G+ +
Sbjct: 239 EETGEINIVYRRKEGGYGLIIPKEDGKTE 267
[11][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
RepID=Q672Q2_SOLLC
Length = 311
Score = 172 bits (436), Expect = 1e-41
Identities = 90/142 (63%), Positives = 109/142 (76%), Gaps = 1/142 (0%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
++RAEE E+ YGSID+VSSIIQRKLRKIKEK++D GRHMKG +RLK + L D
Sbjct: 153 VIRAEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVRDPEALLVQEDL 212
Query: 244 EDEIEITPQKDDEEE-LIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 68
E + +DD+ + + EVVR K FDMPPL+V EAI+QLE VDHDFY FRNEETGEIN
Sbjct: 213 ETLSQEEEVEDDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRNEETGEIN 272
Query: 67 IVYKRKEGGYGLIIPKGNGEVD 2
IVY+RKEGGYGLIIPK +G+ +
Sbjct: 273 IVYRRKEGGYGLIIPKEDGKTE 294
[12][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
RepID=B6TYP8_MAIZE
Length = 309
Score = 152 bits (385), Expect = 1e-35
Identities = 82/144 (56%), Positives = 108/144 (75%), Gaps = 3/144 (2%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP---LPS 254
++RAEE AE+TY SIDL ++I++RKLRKIKEKET+ R G + + I P LP
Sbjct: 140 VLRAEEDAESTYASIDLAAAIVKRKLRKIKEKETEVRR---GGDADGVWDEIPPADLLPP 196
Query: 253 GDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 74
E D++E +DEE ++ +VVRTK F+MPPLTV EA++QLE VDHDFY FR+E TG+
Sbjct: 197 A-EADDLEAAVGAEDEETVLAKVVRTKVFEMPPLTVEEALEQLENVDHDFYCFRDEATGQ 255
Query: 73 INIVYKRKEGGYGLIIPKGNGEVD 2
+NI+Y+RKEGGYGLIIPK +G+VD
Sbjct: 256 VNILYRRKEGGYGLIIPKNDGKVD 279
[13][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
Length = 309
Score = 151 bits (381), Expect = 3e-35
Identities = 80/146 (54%), Positives = 111/146 (76%), Gaps = 6/146 (4%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
++RAEE AE+TY SIDL SSII+RKLRKIKEKETD RH+KG + S+ L ++
Sbjct: 149 VIRAEEDAESTYASIDLASSIIKRKLRKIKEKETDV-RHLKG-TKPPVSDWPPSLLDNND 206
Query: 244 ED------EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 83
+D ++E +DE+ ++ +VVRTK F+MPPL+V EA++QL VDH+FYAFR+E+
Sbjct: 207 DDAQAQLKDLEEAVGAEDEDTVLTKVVRTKVFEMPPLSVEEAMEQLVNVDHNFYAFRDEK 266
Query: 82 TGEINIVYKRKEGGYGLIIPKGNGEV 5
TGE+N++YKRKEGG+GLI+PKG+G +
Sbjct: 267 TGEMNVLYKRKEGGFGLIVPKGDGHL 292
[14][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
bicolor RepID=C5WRX8_SORBI
Length = 310
Score = 147 bits (372), Expect = 4e-34
Identities = 79/143 (55%), Positives = 104/143 (72%), Gaps = 2/143 (1%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGD- 248
++RAEE AE+TY SIDL ++II+RKLRKIKEKET+ R G + E LPL D
Sbjct: 140 VLRAEEDAESTYASIDLAAAIIKRKLRKIKEKETEVRRDGDGGAGGAWEEE-LPLLDDDL 198
Query: 247 -EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 71
E DE+ +DE+ ++ +VVRTK F+MPPLTV EA++QL+ V H+FY FR+E TG++
Sbjct: 199 VEADELAAAVGAEDEQTVVAKVVRTKVFEMPPLTVEEALEQLDNVGHNFYCFRDEATGQV 258
Query: 70 NIVYKRKEGGYGLIIPKGNGEVD 2
NI+Y+RKEGGYGLIIPK +G D
Sbjct: 259 NILYRRKEGGYGLIIPKEDGNFD 281
[15][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LMC5_PICSI
Length = 321
Score = 147 bits (372), Expect = 4e-34
Identities = 79/145 (54%), Positives = 102/145 (70%), Gaps = 8/145 (5%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
+VRAEE AET Y SID+VS II+RKLRKIKEK+ HGR K + K E++ + +
Sbjct: 156 VVRAEEEAETIYASIDIVSDIIRRKLRKIKEKDGGHGRPSKMRKQPKLGELLSTVVMDVK 215
Query: 244 ED-EIEITPQKDDEE-------ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
E + E+ D EE +L +EVVRTKYF+MPP++ EA++QL VDHDFYAFRN
Sbjct: 216 ETRDKELDDLADVEEMRYEKIDDLSDEVVRTKYFEMPPMSPEEALEQLMNVDHDFYAFRN 275
Query: 88 EETGEINIVYKRKEGGYGLIIPKGN 14
E+GE+N++YKRK GGYGLI+PK N
Sbjct: 276 MESGEVNVLYKRKHGGYGLIVPKNN 300
[16][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWK9_PHYPA
Length = 221
Score = 134 bits (336), Expect = 6e-30
Identities = 72/135 (53%), Positives = 93/135 (68%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
+VRAEE AE+ Y SID VS +I RKLRKIKEK+ HGR K + + EV+ S +
Sbjct: 78 VVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPTKSRHSPRIGEVL----SDEV 133
Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
D I +K D+ L +E+VRTKYF+M P+ EA++QL V HDFYAFRN E+GEINI
Sbjct: 134 VDLDPILGRKPDD--LPDEIVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINI 191
Query: 64 VYKRKEGGYGLIIPK 20
+YKR GGYG+I+P+
Sbjct: 192 LYKRTHGGYGIIVPR 206
[17][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TA00_PHYPA
Length = 297
Score = 132 bits (331), Expect = 2e-29
Identities = 74/137 (54%), Positives = 94/137 (68%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
+VRAEE AE+ Y SID VS +I RKLRKIKEK+ HGR K R+ EV+ S +
Sbjct: 156 VVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPAKYSPRI--GEVL----SNEV 209
Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
D I +K D+ L +EVVRTKYF+M P+ EA++QL V HDFYAFRN E+GEINI
Sbjct: 210 VDLDPILERKPDD--LPDEVVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINI 267
Query: 64 VYKRKEGGYGLIIPKGN 14
+YKR GGYG+I+P+ +
Sbjct: 268 LYKRTHGGYGIIVPRND 284
[18][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DKM6_THEEB
Length = 209
Score = 129 bits (324), Expect = 1e-28
Identities = 75/143 (52%), Positives = 92/143 (64%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V V ++RAEE +E Y SIDLV+ I RKLRK+KEK D R K N + EV+
Sbjct: 58 VTVFVNGSVIRAEESSENLYASIDLVADKIARKLRKLKEKRQDKSR-AKDTNSVVEPEVV 116
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
L GD TPQ L E+VVR KYF MPP+T+ EA++ LEMVDHDFY FRN
Sbjct: 117 TDLV-GDR------TPQ------LPEQVVRMKYFAMPPMTIQEALEHLEMVDHDFYVFRN 163
Query: 88 EETGEINIVYKRKEGGYGLIIPK 20
+TGEIN+VY+R GGYG+I P+
Sbjct: 164 RDTGEINVVYERNHGGYGVIQPR 186
[19][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2IVM1_NOSP7
Length = 214
Score = 127 bits (318), Expect = 7e-28
Identities = 70/150 (46%), Positives = 94/150 (62%), Gaps = 1/150 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + ++RAEE +E Y SIDLV+ I R+LRK KE+ D + P + +E +
Sbjct: 58 VTIYANGSVIRAEESSENLYASIDLVADKIARQLRKYKERRQDQ-KTQSQPTEVVVAESV 116
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
+P GD TP EL EVVRTKYF MPP+T+ EA++QL++V HDFY FRN
Sbjct: 117 VPDLIGDR------TP------ELPNEVVRTKYFSMPPMTLAEALEQLQLVGHDFYMFRN 164
Query: 88 EETGEINIVYKRKEGGYGLIIPK-GNGEVD 2
ETGEIN++Y+R GGYG+I P+ GNG +
Sbjct: 165 SETGEINVIYERNHGGYGVIHPRNGNGHTN 194
[20][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
Length = 209
Score = 126 bits (317), Expect = 9e-28
Identities = 73/144 (50%), Positives = 92/144 (63%), Gaps = 1/144 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD-HGRHMKGPNRLKFSEV 272
V + ++RAEE +E Y SIDLVS I R+LRK KE+ D H R + P V
Sbjct: 58 VTIYTNGSVIRAEESSENLYASIDLVSDKIARQLRKFKERRQDKHSRSKEEP------VV 111
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+PL + D TP EL EEVVRTKYF MPP+T+ EA++QLE+VDHDFY FR
Sbjct: 112 SVPLVTDLTGDR---TP------ELPEEVVRTKYFAMPPMTLREALEQLELVDHDFYMFR 162
Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20
N ETGEIN++Y+R GGYG+I P+
Sbjct: 163 NAETGEINVIYERNHGGYGVIQPR 186
[21][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YSA5_ANASP
Length = 213
Score = 124 bits (311), Expect = 4e-27
Identities = 67/145 (46%), Positives = 88/145 (60%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + ++RAEE +E Y SIDLV+ I R+LRK KE++ D + E +
Sbjct: 58 VTIYANGSVIRAEESSENLYASIDLVADKISRQLRKYKERKQDQKTQAQPTTETIVPETV 117
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
+ GD TP EL EEVVRTKYF MPP+TV EA++QL++V HDFY F N
Sbjct: 118 VADLIGDR------TP------ELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHN 165
Query: 88 EETGEINIVYKRKEGGYGLIIPKGN 14
ETGEIN++Y+R GGYG+I P+ N
Sbjct: 166 AETGEINVIYERNHGGYGVIQPRNN 190
[22][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
Length = 213
Score = 124 bits (310), Expect = 6e-27
Identities = 67/145 (46%), Positives = 90/145 (62%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + ++RAEE +E Y SIDLV+ I R+LRK KE++ D + L +E I
Sbjct: 58 VTIYANGSVIRAEESSENLYASIDLVADKISRQLRKYKERKQD-----QKTQALPTTETI 112
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
+P + + D EL EEVVRTKYF MPP+TV EA++QL++V HDFY F N
Sbjct: 113 VP-------ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHN 165
Query: 88 EETGEINIVYKRKEGGYGLIIPKGN 14
ETGEIN++Y+R GGYG+I P+ N
Sbjct: 166 AETGEINVIYERNHGGYGVIQPRNN 190
[23][TOP]
>UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Cyanothece RepID=C7QW97_CYAP0
Length = 205
Score = 122 bits (306), Expect = 2e-26
Identities = 75/164 (45%), Positives = 97/164 (59%)
Frame = -1
Query: 505 AAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 326
A + NK AE V V ++RA+E +E+ Y SIDLVS I R+LRK KEK
Sbjct: 55 ARITNKHKAE---------VTVYANGTVIRAQEGSESLYASIDLVSDKIARQLRKYKEKL 105
Query: 325 TDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTV 146
+ K PN +K EV + E D I D EL EV+R KYF MPP+T+
Sbjct: 106 NNK----KAPNPVKVGEVTTA--TAIEGDLIG-----DRTPELPAEVIRMKYFAMPPMTI 154
Query: 145 FEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGN 14
EA+ QLE+VDHDFY FRN++T EIN++Y+R GGYG+I P G+
Sbjct: 155 DEALHQLELVDHDFYMFRNKDTDEINVIYQRNHGGYGVIQPHGS 198
[24][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
azollae' 0708 RepID=B9YPU1_ANAAZ
Length = 214
Score = 120 bits (302), Expect = 5e-26
Identities = 67/143 (46%), Positives = 86/143 (60%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + ++RAEE +E Y SIDLV+ I R+LRK KE+ DH N +E +
Sbjct: 58 VTIYANGSVIRAEESSENLYASIDLVADKIARQLRKYKERRQDHKTQPIPTNEAVVAEPV 117
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
GD TP EL EVVRTKYF MPP+T+ EA +QL++V HDFY FRN
Sbjct: 118 ADSLIGDR------TP------ELPGEVVRTKYFPMPPMTLAEAQEQLQLVGHDFYMFRN 165
Query: 88 EETGEINIVYKRKEGGYGLIIPK 20
ETGEIN++Y+R GGYG+I P+
Sbjct: 166 AETGEINVIYERNHGGYGVIQPR 188
[25][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0CDL4_ACAM1
Length = 212
Score = 120 bits (301), Expect = 6e-26
Identities = 65/144 (45%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + V ++RAEE +E Y SIDLV+ I R+LRK KEK R KGPN+
Sbjct: 58 VTLFVNGSVIRAEESSENLYASIDLVADKIARQLRKYKEK-----RQTKGPNKGSNRSKA 112
Query: 268 LPLPSGDEEDEI-EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+ L + +E+ I ++T +D EL EEVVR KYF + P++V +A++QL++VDHDFY F
Sbjct: 113 VALQTPEEQPLIGDLT--RDRAPELPEEVVRCKYFAISPMSVHDALEQLDLVDHDFYVFE 170
Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20
N +TG++N++Y+R GGYG+I P+
Sbjct: 171 NADTGQLNVIYERNHGGYGVIQPR 194
[26][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
Length = 213
Score = 120 bits (300), Expect = 8e-26
Identities = 66/137 (48%), Positives = 85/137 (62%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
++RAEE +E Y SIDLV+ I R+LRK KE+ D + N++ E + GD
Sbjct: 66 VIRAEESSENLYASIDLVADKIARQLRKYKERLQDQKTNAPPTNQVLVPEPVAADLIGDR 125
Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
TP EL EVVRTKYF MPP+TV EA +QL++V HDFY F N ETGEIN+
Sbjct: 126 ------TP------ELPNEVVRTKYFSMPPMTVAEATEQLQLVGHDFYMFHNAETGEINV 173
Query: 64 VYKRKEGGYGLIIPKGN 14
+Y+R GGYG+I P+ N
Sbjct: 174 IYERNHGGYGVIQPRHN 190
[27][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VJW0_9CYAN
Length = 215
Score = 119 bits (299), Expect = 1e-25
Identities = 71/150 (47%), Positives = 92/150 (61%), Gaps = 1/150 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + K ++RA+E +E Y SIDLV+ IQR+LRK KEK+ K + K VI
Sbjct: 58 VTIYANKTVIRAQESSEDLYASIDLVADKIQRQLRKYKEKQ-----QKKTQTQPKTGAVI 112
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
P ED I D EL EVVR KYF MPP+T+ EA +QL++VDHDFY FRN
Sbjct: 113 HEAPV--VEDLIG-----DRTPELPTEVVRMKYFAMPPMTIEEATEQLQLVDHDFYMFRN 165
Query: 88 EETGEINIVYKRKEGGYGLIIPK-GNGEVD 2
+T EIN++Y+R GGYG+I P+ GNG +
Sbjct: 166 AKTDEINVIYERNHGGYGVIQPRNGNGHTN 195
[28][TOP]
>UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WZE1_CYAA5
Length = 201
Score = 119 bits (298), Expect = 1e-25
Identities = 75/172 (43%), Positives = 98/172 (56%)
Frame = -1
Query: 517 VKEVAAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKI 338
V + A + NK AE V V ++RA+E +E Y SIDLVS I R+LRK
Sbjct: 46 VAKNARITNKHKAE---------VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKY 96
Query: 337 KEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMP 158
KEK +H K + +K EV+ E EIE D E L EV+R KYF MP
Sbjct: 97 KEKINNH----KPQSSVKNPEVL-------PEREIEKDLIGDREAALPPEVIRMKYFAMP 145
Query: 157 PLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGNGEVD 2
P+++ EA QLE+VDHDFY FRN++T EIN++Y R GG+G+I P+ E D
Sbjct: 146 PMSIEEAKHQLELVDHDFYMFRNQDTDEINVIYMRNHGGFGVIQPREPNEND 197
[29][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=Q2JS19_SYNJA
Length = 191
Score = 119 bits (297), Expect = 2e-25
Identities = 72/172 (41%), Positives = 93/172 (54%), Gaps = 7/172 (4%)
Frame = -1
Query: 517 VKEVAAVVNKLVAEAAVESIPVV-------VVVEVEKILVRAEEHAETTYGSIDLVSSII 359
VK A + +++ +V P + V V ++RAEE +E Y SID V+ +
Sbjct: 29 VKHFAQITSEVDVNLSVARNPRISANQSAEVTVYANGTVIRAEESSENLYASIDRVADKL 88
Query: 358 QRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVR 179
RKLRK KE+ H + ++ L P E + EL EVVR
Sbjct: 89 ARKLRKYKERNGVHRIRHSPKTSVAVAQQPLTDPLNTER-----------QAELPPEVVR 137
Query: 178 TKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23
TKYF MPP+TV EA+ QLE+VDHDFY FRN E GEIN++Y RK GGYGLI P
Sbjct: 138 TKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEINVIYVRKHGGYGLIRP 189
[30][TOP]
>UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YEZ8_MICAE
Length = 199
Score = 118 bits (296), Expect = 2e-25
Identities = 71/173 (41%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Frame = -1
Query: 517 VKEVAAVVNKLVAEAAVES---IP----VVVVVEVEKILVRAEEHAETTYGSIDLVSSII 359
VK + K+ +VE IP V V ++RA+E +E Y SIDLVS I
Sbjct: 28 VKHFNGITTKVDVHLSVEKNARIPDRHKAEVTVYANGTVIRAQEGSENLYASIDLVSDKI 87
Query: 358 QRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVR 179
R+LRK KE+ DH H + +K SEV+ +E ++ D EL EVVR
Sbjct: 88 ARQLRKYKERLVDHRTH----STVKTSEVV-------QEKPLDDNLIGDRTPELPAEVVR 136
Query: 178 TKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
KYF MPP+T+ EA+ QL++VDHDF+ F N++T EIN++Y+R GG+G+I P+
Sbjct: 137 MKYFAMPPMTIEEALTQLQLVDHDFFMFCNKDTNEINVIYQRNHGGFGVIQPR 189
[31][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YIH4_9CYAN
Length = 212
Score = 118 bits (295), Expect = 3e-25
Identities = 68/146 (46%), Positives = 93/146 (63%), Gaps = 1/146 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + ++RA+E +E Y SIDLV+ I R+LRK K+K G+H+ P K +EV+
Sbjct: 58 VTIYANGTVIRAQESSENLYASIDLVADKIARQLRKFKDKR--QGKHLHPP---KLAEVV 112
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
P ED I D + EL EVVRTKYF MPP+ + +A++QL++VDHDFY F N
Sbjct: 113 ENQPV--IEDLIG-----DRQPELPPEVVRTKYFAMPPMNLQDALEQLQLVDHDFYVFCN 165
Query: 88 EETGEINIVYKR-KEGGYGLIIPKGN 14
+TGE+N++YKR GGYGLI P+ N
Sbjct: 166 ADTGELNVIYKRVNHGGYGLIQPRNN 191
[32][TOP]
>UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7
Length = 199
Score = 117 bits (294), Expect = 4e-25
Identities = 62/143 (43%), Positives = 91/143 (63%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V ++RA+E +E Y SIDLVS I R+LRK KE++ + H + +K EV+
Sbjct: 58 VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKERKLEQNAH----SPVKAGEVV 113
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
+++ IE D + EL EVVR KYF MPP+++ EA++QL++VDHDF+ FRN
Sbjct: 114 -------QQETIEENLIGDRQPELPPEVVRMKYFGMPPMSIDEALEQLQLVDHDFFMFRN 166
Query: 88 EETGEINIVYKRKEGGYGLIIPK 20
+T EIN++Y R GG+G+I P+
Sbjct: 167 RDTNEINVIYIRNHGGFGVIQPR 189
[33][TOP]
>UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT
Length = 199
Score = 117 bits (293), Expect = 5e-25
Identities = 67/149 (44%), Positives = 89/149 (59%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V ++RA+E +E Y SIDLVS I R+LRK KEK ++H K + K EV+
Sbjct: 58 VTVYANGTVIRAQEGSENLYASIDLVSDKISRQLRKYKEKVSNH----KPQSSAKLPEVL 113
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
E E+ D + EL EV+R KYF MP +++ EA QLE+VDHDFY FRN
Sbjct: 114 -------PEKEVSEDLIGDRQAELPPEVIRMKYFAMPSMSIEEAKHQLELVDHDFYMFRN 166
Query: 88 EETGEINIVYKRKEGGYGLIIPKGNGEVD 2
+ET EIN++Y R GG+G+I P+ E D
Sbjct: 167 QETEEINVIYMRNHGGFGIIQPREANEND 195
[34][TOP]
>UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI
Length = 187
Score = 117 bits (292), Expect = 7e-25
Identities = 62/143 (43%), Positives = 87/143 (60%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V+ ++RAEE E Y SIDLV+ + R++RK KE+ + G ++
Sbjct: 58 VTVQASGTIIRAEEETENLYASIDLVADKLHRQMRKYKERMQKKPKPKTG--LAVANQAP 115
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
+ LP+GDE+ L +EVVRTKYF MPP++ EA+D L +VDHDF+ FRN
Sbjct: 116 ISLPNGDEK-----------ATALPKEVVRTKYFAMPPMSPEEALDHLALVDHDFFVFRN 164
Query: 88 EETGEINIVYKRKEGGYGLIIPK 20
E+GEIN++Y R GGYGLI+P+
Sbjct: 165 AESGEINVLYARNHGGYGLIVPR 187
[35][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
Length = 190
Score = 117 bits (292), Expect = 7e-25
Identities = 69/144 (47%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKFSEV 272
V V ++RAEE +E Y SID V+ + RKLRK KE+ H RH K S
Sbjct: 59 VTVYANGTVIRAEESSENLYASIDRVADKLARKLRKYKERNGIHRVRHTP-----KTSVA 113
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+ P D + + + EL EVVRTKYF MPP+TV EA+ QLE+VDHDFY FR
Sbjct: 114 VAQQPVTDPLNT-------ERQAELPAEVVRTKYFAMPPMTVQEALHQLELVDHDFYVFR 166
Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20
N E GEIN++Y R GGYGLI P+
Sbjct: 167 NIENGEINVIYVRNHGGYGLIRPR 190
[36][TOP]
>UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110
RepID=A3IRI7_9CHRO
Length = 199
Score = 117 bits (292), Expect = 7e-25
Identities = 69/149 (46%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH--MKGPNRLKFSE 275
V V ++RA+E +E Y SIDLVS I R+LRK KEK +H +K P+ L +E
Sbjct: 58 VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNHKPQSSVKSPDVLPETE 117
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
V +ED I D E EL EV+R KYF MPP+++ EA QLE+VDHDFY F
Sbjct: 118 V--------KEDLIG-----DREVELPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYMF 164
Query: 94 RNEETGEINIVYKRKEGGYGLIIPKGNGE 8
RN++T EIN++Y R GG+G+I P+ E
Sbjct: 165 RNQDTDEINVIYMRNHGGFGVIQPRETHE 193
[37][TOP]
>UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JSS1_MICAN
Length = 199
Score = 116 bits (291), Expect = 9e-25
Identities = 71/173 (41%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Frame = -1
Query: 517 VKEVAAVVNKLVAEAAVES---IP----VVVVVEVEKILVRAEEHAETTYGSIDLVSSII 359
VK + K+ +VE IP V V ++RA+E +E Y SIDLVS I
Sbjct: 28 VKHFNGITTKVDVHLSVEKNARIPDRHRAEVTVYANGTVIRAQEGSENLYASIDLVSDKI 87
Query: 358 QRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVR 179
R+LRK KE+ DH + +K SEV+ +E ++ + D EL EVVR
Sbjct: 88 ARQLRKYKERLVDHRTNAP----VKTSEVV-------QEKPLDGSLIGDRTPELPAEVVR 136
Query: 178 TKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
KYF MPP+T+ EA+ QL++VDHDFY F N++T EIN++Y+R GG+G+I P+
Sbjct: 137 MKYFAMPPMTIEEALTQLQLVDHDFYMFCNKDTNEINVIYQRNHGGFGVIQPR 189
[38][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
Length = 224
Score = 115 bits (288), Expect = 2e-24
Identities = 66/169 (39%), Positives = 101/169 (59%), Gaps = 7/169 (4%)
Frame = -1
Query: 499 VVNKLVAEAAVESIPVV-------VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRK 341
++NK+ +V++ P + V V + ++VRAEE +E+ Y SID+V+ + R+LRK
Sbjct: 34 LINKVDVCLSVQNNPRIAPKQTAEVTVFLNNVVVRAEESSESLYASIDMVTDKLTRQLRK 93
Query: 340 IKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDM 161
KEK D P + + + P + D E+ + + +L + VVR+KYF M
Sbjct: 94 YKEKRRDQDHATVRPTDVD-ATINAPDITSHNADISEVL---NHQPKLPDTVVRSKYFAM 149
Query: 160 PPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGN 14
PP+TV A++ LE+V HDFY FRN ETGEIN++Y+R GYGL+ P+ N
Sbjct: 150 PPMTVQTALENLELVGHDFYMFRNVETGEINVIYERNHKGYGLLQPRQN 198
[39][TOP]
>UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002
RepID=LRTA_SYNP2
Length = 193
Score = 114 bits (286), Expect = 4e-24
Identities = 65/143 (45%), Positives = 86/143 (60%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V ++RA+E +E Y SIDLVS I R+LRK KEK H++ K SEV+
Sbjct: 58 VTVYANGTVIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQE----KTSEVL 113
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
ED + D EL EVVR KYF MPP+T+ EA++QL++VDHDFY F N
Sbjct: 114 -------PEDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLN 166
Query: 88 EETGEINIVYKRKEGGYGLIIPK 20
++T IN++Y R GGYG+I P+
Sbjct: 167 KDTNAINVIYIRNHGGYGVIQPR 189
[40][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
Length = 215
Score = 114 bits (285), Expect = 5e-24
Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 1/147 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + ++RA+E +E Y SIDLV+ I R+LRK KEK K + ++ V+
Sbjct: 58 VTIYANGTVIRAQESSENLYASIDLVADKIARQLRKYKEKRQSKVNKTKTVDLIESQPVV 117
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
L D + EL EVVRTKYF MP +TV EA++QL+++DHDFY F N
Sbjct: 118 ENLIG-------------DRQAELPSEVVRTKYFPMPSMTVEEALEQLQLIDHDFYMFSN 164
Query: 88 EETGEINIVYKR-KEGGYGLIIPKGNG 11
TGEIN++YKR GGYGLI P+ NG
Sbjct: 165 GVTGEINVIYKRYHHGGYGLIQPRPNG 191
[41][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
6803 RepID=LRTA_SYNY3
Length = 191
Score = 114 bits (284), Expect = 6e-24
Identities = 67/161 (41%), Positives = 93/161 (57%)
Frame = -1
Query: 505 AAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 326
A + NK AE V V ++RA+E +E Y SIDLV+ I R+LRK KE+
Sbjct: 48 ARITNKHKAE---------VTVYANGTVIRAQEGSENLYASIDLVADKIARQLRKYKERI 98
Query: 325 TDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTV 146
D K +K SE++ E+ +E D EL EV+R KYF MPP+ +
Sbjct: 99 QD-----KQHGNVKTSEIV-------EDKPVEENLIGDRAPELPSEVLRMKYFAMPPMAI 146
Query: 145 FEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23
+A++QL++VDHDFY FRN++T EIN++Y R GGYG+I P
Sbjct: 147 EDALEQLQLVDHDFYMFRNKDTDEINVIYIRNHGGYGVIQP 187
[42][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
Length = 212
Score = 113 bits (283), Expect = 8e-24
Identities = 68/149 (45%), Positives = 91/149 (61%), Gaps = 1/149 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + ++RA+E +E Y SIDLV+ I R+LRK KEK R K K EV+
Sbjct: 58 VTIYANGTVIRAQESSENLYASIDLVADKIARQLRKYKEK-----RMAKQYQLPKTGEVV 112
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
P D+ D +L EEVVRTKYF MPP+++ EA++QL+++DHDFY FRN
Sbjct: 113 AQKPIVDDLIG-------DRTVKLPEEVVRTKYFAMPPMSIQEALEQLQLIDHDFYMFRN 165
Query: 88 EETGEINIVYKRK-EGGYGLIIPKGNGEV 5
ET EIN++Y+R GGYG+I P+ NG V
Sbjct: 166 AETDEINVIYQRSHHGGYGVIQPR-NGSV 193
[43][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
Length = 207
Score = 112 bits (279), Expect = 2e-23
Identities = 65/146 (44%), Positives = 88/146 (60%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + ++RAEE E Y SIDLVS I R+L+K KEK D KG +L +E
Sbjct: 58 VTIYANGTVIRAEECNENLYASIDLVSDKITRQLKKYKEKLRDR----KG--QLSTAETA 111
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
L G ++ + EL +++VRTKYF MP +TV +A+ QL++VDHDFY FRN
Sbjct: 112 DQLSDGALVTDL----LNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRN 167
Query: 88 EETGEINIVYKRKEGGYGLIIPKGNG 11
TGEIN++Y+R GGYG+I P+ G
Sbjct: 168 AATGEINVIYERNHGGYGVIQPRPEG 193
[44][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
Length = 199
Score = 110 bits (276), Expect = 5e-23
Identities = 61/145 (42%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V ++RA+E +E Y SIDLVS I R+LRK KE+ + +
Sbjct: 58 VTVYANGAVIRAQEGSENLYASIDLVSDKIARQLRKYKERRLEQKAYS------------ 105
Query: 268 LPLPSGD--EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
P+ +GD ++ +E D + EL EVVR KYF MP +++ EA++QL++VDHDFY F
Sbjct: 106 -PVKTGDVVQDQPVEGNLIGDRQPELPPEVVRMKYFAMPLMSIEEALEQLQLVDHDFYMF 164
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
RN T EIN++Y R GGYG+I P+
Sbjct: 165 RNRNTNEINVIYIRNHGGYGVIQPR 189
[45][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
PCC 6301 RepID=Q5N179_SYNP6
Length = 207
Score = 110 bits (275), Expect = 7e-23
Identities = 64/146 (43%), Positives = 88/146 (60%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + ++RAEE E Y SIDLVS I R+L+K KE+ D KG +L +E
Sbjct: 58 VTIYANGTVIRAEECNENLYASIDLVSDKITRQLKKYKEELRDR----KG--QLSTAETA 111
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
L G ++ + EL +++VRTKYF MP +TV +A+ QL++VDHDFY FRN
Sbjct: 112 DQLSDGALVTDL----LNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRN 167
Query: 88 EETGEINIVYKRKEGGYGLIIPKGNG 11
TGEIN++Y+R GGYG+I P+ G
Sbjct: 168 AATGEINVIYERNHGGYGVIQPRPEG 193
[46][TOP]
>UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307
RepID=A5GUZ2_SYNR3
Length = 187
Score = 106 bits (265), Expect = 1e-21
Identities = 56/137 (40%), Positives = 80/137 (58%), Gaps = 5/137 (3%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
++RA+E ++ Y SIDLV+ + R+L++ K++ HG H D
Sbjct: 65 VIRAQERSQNLYASIDLVAGKLARQLQRHKDRRQGHGHH------------------SDL 106
Query: 244 EDEIEITPQKDD-----EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEET 80
+ E E+ P + D EL VVR KYF MPP++V EAI QLE++DHDFY FRN +
Sbjct: 107 QAEPEVMPLQGDMLQGRHAELPAPVVRRKYFAMPPMSVEEAIHQLEVIDHDFYVFRNADN 166
Query: 79 GEINIVYKRKEGGYGLI 29
GE+ +VY+R GGYG+I
Sbjct: 167 GELQVVYQRNHGGYGVI 183
[47][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
RepID=C6YXL0_ORYSJ
Length = 321
Score = 105 bits (263), Expect = 2e-21
Identities = 63/144 (43%), Positives = 92/144 (63%), Gaps = 6/144 (4%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
++RAEE AE+TY SIDL SSII+RKLRKIKEKETD RH+KG + S+ L ++
Sbjct: 149 VIRAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKG-TKPPVSDWPPSLLDNND 206
Query: 244 ED------EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 83
+D ++E +DE+ ++ VVRTK F+MPPL+ EA++QL DH F+A +
Sbjct: 207 DDAQAQLKDLEEAVGAEDEDTVLTRVVRTKVFEMPPLSGEEAMEQLGNGDHTFHALPRRK 266
Query: 82 TGEINIVYKRKEGGYGLIIPKGNG 11
G +++ G +G I+P+G+G
Sbjct: 267 NGGDEPPVQKEGGRFGPIVPQGDG 290
[48][TOP]
>UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IMZ9_9CHRO
Length = 195
Score = 105 bits (261), Expect = 3e-21
Identities = 59/139 (42%), Positives = 81/139 (58%), Gaps = 4/139 (2%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE----VILPLP 257
++RA+EH++ Y SIDLV+S + R+L + KE+ H RH +R E LP P
Sbjct: 65 VIRAQEHSDNLYASIDLVASKLTRQLNRYKERV--HERHQGPVHRSARDEEAGAASLPPP 122
Query: 256 SGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG 77
D E EL VR KYF MPP+++ EA+ QLE++DHDFY FR E+G
Sbjct: 123 GSSLTD--------GKEPELPSRGVRRKYFAMPPMSLDEALHQLELIDHDFYVFREAESG 174
Query: 76 EINIVYKRKEGGYGLIIPK 20
+I +VY R GG+G+I PK
Sbjct: 175 QIQVVYHRNHGGFGVIQPK 193
[49][TOP]
>UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CWK2_SYNPV
Length = 195
Score = 104 bits (260), Expect = 4e-21
Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V ++RA+E +E Y SIDLV+S + R+LR+ K++ +DH H G K SE
Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVASKLARQLRRYKDRHSDH-HHSHGH---KASET- 111
Query: 268 LPLPSGDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
P ++E + D +E +L VR KYF MPP+T+ +A QL+++DHDFY FR
Sbjct: 112 -PTTEAVLDNEAVVESLLDGKEVQLPSPGVRRKYFAMPPMTLEQARQQLDLIDHDFYVFR 170
Query: 91 NEETGEINIVYKRKEGGYGLIIPKG 17
+ ++GE+ ++Y R GGYG+I +G
Sbjct: 171 DSDSGELQVIYHRNHGGYGVIEARG 195
[50][TOP]
>UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9
Length = 195
Score = 104 bits (259), Expect = 5e-21
Identities = 55/140 (39%), Positives = 83/140 (59%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V ++RA+E +E Y SIDLV + R+LRK KE+ DH H G + + +
Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHGHS----ASLT 111
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
+E +E + E +L E VR KYF MPP+T+ +A QL+++DHDFY FR+
Sbjct: 112 PSTEEVSDESAVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFRD 171
Query: 88 EETGEINIVYKRKEGGYGLI 29
+TG++ ++Y+R GGYG+I
Sbjct: 172 SKTGDLQVIYRRNHGGYGVI 191
[51][TOP]
>UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9515 RepID=A2BV60_PROM5
Length = 194
Score = 104 bits (259), Expect = 5e-21
Identities = 57/144 (39%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + ++RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F+
Sbjct: 57 VTIFASGTIIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHYKNLNYNLEKNKHSFTN-- 114
Query: 268 LPLPSGDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+ + D I+ D E +L E ++ KYF+M P+++ EA QL+++DHDFY FR
Sbjct: 115 ----TNEHLDSIDKNIFNDKREAKLPEPSIKNKYFEMIPISLEEARKQLDLIDHDFYVFR 170
Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20
N++ E+ ++YKRK GGYGLI K
Sbjct: 171 NKKNNELQVIYKRKHGGYGLIQSK 194
[52][TOP]
>UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str.
AS9601 RepID=A2BPM8_PROMS
Length = 194
Score = 103 bits (257), Expect = 8e-21
Identities = 57/145 (39%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSE 275
V + ++RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L
Sbjct: 57 VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL---- 112
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
P+ S + + ++ E L E ++ KYF+M P++ EA QL+++DHDFY F
Sbjct: 113 ---PIESMESNFLDKALFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVF 169
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
RN++ E+ ++YKR GGYGLI K
Sbjct: 170 RNKKNNELQVIYKRNHGGYGLIQSK 194
[53][TOP]
>UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
CC9311 RepID=Q0ICJ8_SYNS3
Length = 191
Score = 103 bits (256), Expect = 1e-20
Identities = 57/140 (40%), Positives = 86/140 (61%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V ++RA+E +E Y SIDLV+S + R+LR+ KE+ +DHG H P ++V+
Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVASKLARQLRRFKERHSDHG-HRTTPTAA--NDVL 113
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
L E E + + E +L VR KYF MP +++ EA QLE++DHDFY FR+
Sbjct: 114 LT------ERPTEDSLLEGKEAQLPSPGVRRKYFAMPAMSLEEARHQLELIDHDFYLFRD 167
Query: 88 EETGEINIVYKRKEGGYGLI 29
+E+GE+ ++Y R GG+G+I
Sbjct: 168 KESGELQVIYHRNHGGFGVI 187
[54][TOP]
>UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJ89_SYNPW
Length = 195
Score = 103 bits (256), Expect = 1e-20
Identities = 56/141 (39%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V ++RA+E +E Y SIDLV+S + R+LR+ K++ +DH H G + SE
Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVASKLARQLRRFKDRHSDH-HHSHGH---RASET- 111
Query: 268 LPLPSGDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
P +DE + D +E +L VR KYF MPP+T+ +A QL+++DHDFY FR
Sbjct: 112 -PTTESVLDDEAIVESLLDGKEVQLPSPGVRRKYFSMPPMTLEQARQQLDLIDHDFYLFR 170
Query: 91 NEETGEINIVYKRKEGGYGLI 29
+ +G++ ++Y+R GGYG+I
Sbjct: 171 DSASGDLQVIYRRNHGGYGVI 191
[55][TOP]
>UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9301 RepID=A3PBB8_PROM0
Length = 194
Score = 103 bits (256), Expect = 1e-20
Identities = 57/145 (39%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSE 275
V + ++RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L
Sbjct: 57 VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL---- 112
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
P+ S + + ++ E L E ++ KYF+M P++ EA QL+++DHDFY F
Sbjct: 113 ---PIESMESNFLDKAFFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVF 169
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
RN++ E+ ++YKR GGYGLI K
Sbjct: 170 RNKKNNELQVIYKRNHGGYGLIQSK 194
[56][TOP]
>UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP
Length = 194
Score = 101 bits (252), Expect = 3e-20
Identities = 57/144 (39%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + ++RAEE E Y SIDLVS+ + RKLRK KE+ + N+ +S I
Sbjct: 57 VTIFANGTIIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHNKKLHNNLVKNKNSYSNAI 116
Query: 268 LPLPSGDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+E D I+ ++ E L E ++ KYF+M P+++ EA QL+ +DHDFY FR
Sbjct: 117 ------EESDSIDKDIFNEEREVRLPEPSIKKKYFEMIPISLEEARKQLDFIDHDFYLFR 170
Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20
N+ E+ ++YKR GGYGLI K
Sbjct: 171 NKLNNELQVIYKRNHGGYGLIQSK 194
[57][TOP]
>UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9303 RepID=A2CBL6_PROM3
Length = 195
Score = 101 bits (252), Expect = 3e-20
Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSE 275
V V ++RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H G + +E
Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTPTTE 115
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
++ +E I+ + E L VR KYF MPP++V +A QL+++DHDFY F
Sbjct: 116 AVI------DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARHQLDLIDHDFYLF 169
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
R +E+G++ ++Y+R GGYG+I
Sbjct: 170 REQESGQLQVIYRRNHGGYGVI 191
[58][TOP]
>UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
str. MIT 9313 RepID=Q7V8W0_PROMM
Length = 195
Score = 100 bits (250), Expect = 5e-20
Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSE 275
V V ++RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H G + +E
Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTPTTE 115
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
++ +E I+ + E L VR KYF MPP++V +A QL+++DHDFY F
Sbjct: 116 AVI------DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARYQLDLIDHDFYLF 169
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
R +E+G++ ++Y+R GGYG+I
Sbjct: 170 REQESGQLQVIYRRNHGGYGVI 191
[59][TOP]
>UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U8F3_SYNPX
Length = 195
Score = 100 bits (250), Expect = 5e-20
Identities = 51/145 (35%), Positives = 89/145 (61%), Gaps = 1/145 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEV 272
V V ++RA+E +E Y SIDL +S + R+LR+ KE+ +DH H + +E
Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLAASKLARQLRRWKERHSDHHHSHGHSASTTPATEA 116
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+ ++ +++ + + E EL + VR KYF MPP+++ EA QL+++DHDFY FR
Sbjct: 117 VT------DDSQVDGSLLQGREAELPDPGVRRKYFAMPPMSLEEARRQLDLIDHDFYLFR 170
Query: 91 NEETGEINIVYKRKEGGYGLIIPKG 17
++++ ++ ++Y+R GGYG+I +G
Sbjct: 171 DKDSDQLQVIYRRNHGGYGVIQARG 195
[60][TOP]
>UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Prochlorococcus marinus str. MIT 9312
RepID=Q31CD8_PROM9
Length = 194
Score = 100 bits (250), Expect = 5e-20
Identities = 56/143 (39%), Positives = 80/143 (55%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + ++RAEE E Y SIDLVS+ + RKLRK KE+ + N F
Sbjct: 57 VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNYKTNYINQFKNNESF---- 112
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
P+ S D + ++ E L E ++ KYF+M P++ EA QL+++DHDFY FRN
Sbjct: 113 -PIESADSNVLDKTLFKQGREASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRN 171
Query: 88 EETGEINIVYKRKEGGYGLIIPK 20
++ E+ ++YKR GGYGLI K
Sbjct: 172 KKNNELQVIYKRNHGGYGLIQSK 194
[61][TOP]
>UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE
Length = 195
Score = 100 bits (250), Expect = 5e-20
Identities = 54/140 (38%), Positives = 81/140 (57%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V ++RA+E +E Y SIDLV + R+LRK KE+ DH H G + + +
Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHGHS----ASLT 111
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
+E +E + E +L E VR KYF MPP+T+ +A QL+++DHDFY F++
Sbjct: 112 PSTEEVSDESVVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFKD 171
Query: 88 EETGEINIVYKRKEGGYGLI 29
TG + ++Y+R GGYG+I
Sbjct: 172 SATGALQVIYRRNHGGYGVI 191
[62][TOP]
>UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp.
RS9917 RepID=A3ZA02_9SYNE
Length = 195
Score = 100 bits (249), Expect = 7e-20
Identities = 54/140 (38%), Positives = 85/140 (60%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V ++RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H +R +
Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVASKLCRQLRRFKERHSDH--HHSNGHRASETP-- 112
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
P + + I+ + E +L + VR KYF MPP+++ EA QL+++DHDFY FR+
Sbjct: 113 -PTDAIADAAPIDGSLLDGKEVQLPDPGVRRKYFAMPPMSLEEARHQLDVIDHDFYLFRD 171
Query: 88 EETGEINIVYKRKEGGYGLI 29
TG++ ++Y+R GGYG+I
Sbjct: 172 ASTGDLQVIYRRNHGGYGVI 191
[63][TOP]
>UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured
Prochlorococcus marinus clone ASNC2259
RepID=Q1PKX8_PROMA
Length = 194
Score = 100 bits (248), Expect = 9e-20
Identities = 56/145 (38%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSE 275
V + ++RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L
Sbjct: 57 VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL---- 112
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
P+ S + + + E L + ++ KYF+M P++ EA QL+++DHDFY F
Sbjct: 113 ---PIESMESNFLDKAFFIEGTEASLPKPSIKNKYFEMTPISSDEARKQLDLIDHDFYVF 169
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
RN++ E+ ++YKR GGYGLI K
Sbjct: 170 RNKKNNELQVIYKRNHGGYGLIQSK 194
[64][TOP]
>UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT
9202 RepID=B9P0E9_PROMA
Length = 194
Score = 100 bits (248), Expect = 9e-20
Identities = 57/145 (39%), Positives = 79/145 (54%), Gaps = 2/145 (1%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + ++RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F
Sbjct: 57 VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF---- 112
Query: 268 LPLPSGDEEDEI--EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
P D E E + E L E ++ KYF+M P++ EA QL+++DHDFY F
Sbjct: 113 ---PIADTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVF 169
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
RN + E+ ++YKR GGYGLI K
Sbjct: 170 RNSKNNELQVIYKRNHGGYGLIQSK 194
[65][TOP]
>UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus
marinus clone HF10-88F10 RepID=Q1PJW9_PROMA
Length = 194
Score = 99.4 bits (246), Expect = 2e-19
Identities = 59/147 (40%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSE 275
V + ++RAEE E Y SIDLVS+ + RKLRK KE+ +T H K N+ F
Sbjct: 57 VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNNQFK--NKESF-- 112
Query: 274 VILPLPSGDEEDEI--EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 101
PS + E E + E L E ++ KYF+M P++ EA QL+++DHDFY
Sbjct: 113 -----PSENTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFY 167
Query: 100 AFRNEETGEINIVYKRKEGGYGLIIPK 20
FRN++ ++ ++YKR GGYGLI K
Sbjct: 168 VFRNKKNNQLQVIYKRNHGGYGLIQSK 194
[66][TOP]
>UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC
Length = 195
Score = 99.0 bits (245), Expect = 2e-19
Identities = 51/141 (36%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEV 272
V V ++RA+E +E Y SIDL + + R+LR+ KE+ +DH H + ++V
Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPSTDV 116
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+ ++ +E + + E EL + VR KYF MPP+ + EA QL+++DHDFY FR
Sbjct: 117 V------NDASPVEASLLQGREAELPDPGVRRKYFAMPPMGLEEARRQLDLIDHDFYLFR 170
Query: 91 NEETGEINIVYKRKEGGYGLI 29
+E+ ++ ++Y+R GGYG+I
Sbjct: 171 EKESDQLQVIYRRNHGGYGVI 191
[67][TOP]
>UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str.
MIT 9215 RepID=A8G3B2_PROM2
Length = 194
Score = 99.0 bits (245), Expect = 2e-19
Identities = 57/144 (39%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + ++RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F
Sbjct: 57 VTIFANGTVIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF---- 112
Query: 268 LPLPSGDEEDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
L + E ++ KD E L E ++ KYF+M P++ EA QL+++DHDFY FR
Sbjct: 113 --LIADTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFR 170
Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20
N + E+ ++YKR GGYGLI K
Sbjct: 171 NNKNNELQVIYKRNHGGYGLIQSK 194
[68][TOP]
>UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. NATL1A RepID=A2C0K6_PROM1
Length = 194
Score = 99.0 bits (245), Expect = 2e-19
Identities = 54/143 (37%), Positives = 79/143 (55%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V ++RA+E +E Y SIDLV++ + R+LRK KE+ H H + +E I
Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHNNQSTKSVQNEKI 116
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
S D + + E L VR KYF+M P+T+ +A QL+++DHDFY FR
Sbjct: 117 ENFSSSDH------SLIEGKEPHLPNPGVRRKYFEMDPMTIEQARVQLDLIDHDFYLFRE 170
Query: 88 EETGEINIVYKRKEGGYGLIIPK 20
EE + ++Y+R GGYG+I K
Sbjct: 171 EEGSALRVIYRRNHGGYGVIQEK 193
[69][TOP]
>UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
RepID=Q05SE1_9SYNE
Length = 195
Score = 98.2 bits (243), Expect = 3e-19
Identities = 51/141 (36%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEV 272
V V ++RA+E +E Y SIDLV++ + R+LR+ KE+ +DH H + +E
Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVANKLSRQLRRYKERHSDHHHSHGHRASTTPTTEA 116
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+L ++ ++ + E L + VR KYF MPP++V EA QL+++DHDF+ FR
Sbjct: 117 VL------DDSAVDGSLLDGKEAHLPDPGVRRKYFPMPPMSVEEARHQLDLIDHDFFLFR 170
Query: 91 NEETGEINIVYKRKEGGYGLI 29
+ + E+ ++Y+R GGYG+I
Sbjct: 171 DASSKELQVIYRRNHGGYGVI 191
[70][TOP]
>UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH
5701 RepID=A3YVD7_9SYNE
Length = 195
Score = 98.2 bits (243), Expect = 3e-19
Identities = 58/164 (35%), Positives = 90/164 (54%), Gaps = 6/164 (3%)
Frame = -1
Query: 493 NKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG 314
N VA+ E V V +++RA+E +E Y SID+V+ + R+LR+ K++ ++H
Sbjct: 47 NPRVAQQTAE-----VTVFANGVVIRAQERSENLYASIDMVAGKLSRQLRRYKDRLSNH- 100
Query: 313 RHMKGPNRLKFSEVILPLPSGDEEDEIE---ITPQK---DDEEELIEEVVRTKYFDMPPL 152
H G P GD+ ++ + P D E L VR KYF MP +
Sbjct: 101 -HGAGS----------PANVGDDTEQPSLEGVLPNDLIGDREPALPVPAVRRKYFSMPAM 149
Query: 151 TVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
++ +A+ QLE++DHDFY FR E +G + +VY+R GG+G+I PK
Sbjct: 150 SLDQALHQLELIDHDFYVFREESSGGLQVVYRRNHGGFGVIQPK 193
[71][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
Length = 284
Score = 98.2 bits (243), Expect = 3e-19
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 2/144 (1%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMKGPNRLKFSEV 272
V V ++R+EE A+ Y SID VS ++RKLRK+KEK+ + +H K + + +
Sbjct: 142 VTVYTRNGIIRSEEEADDLYASIDAVSDKLERKLRKVKEKKISKRPKHNKNAPKAQTDAI 201
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+ + + DE DE +EVVR K+ + TV+EA +++E + H F+AFR
Sbjct: 202 VEEMQAADE--------ALADESMDYDEVVREKFHPVRKCTVYEAAEEMENLGHTFFAFR 253
Query: 91 NEETG-EINIVYKRKEGGYGLIIP 23
N G E+N+VYKR GGYG+I+P
Sbjct: 254 NVAQGNEVNVVYKRDAGGYGVIVP 277
[72][TOP]
>UniRef100_Q8XIE9 30S ribosomal protein S30AE family n=1 Tax=Clostridium perfringens
RepID=Q8XIE9_CLOPE
Length = 179
Score = 97.8 bits (242), Expect = 4e-19
Identities = 56/149 (37%), Positives = 88/149 (59%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V +++ IL+R EE + Y SIDLV I+R++RK K + + R+ + L+F+
Sbjct: 50 VEIMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F
Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150
Query: 94 RNEETGEINIVYKRKEGGYGLIIPKGNGE 8
++ ET ++N+VYKRK+G YGLI P G GE
Sbjct: 151 QDPETNQLNVVYKRKDGNYGLIEP-GLGE 178
[73][TOP]
>UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Prochlorococcus marinus str. NATL2A
RepID=Q46H11_PROMT
Length = 194
Score = 97.8 bits (242), Expect = 4e-19
Identities = 55/143 (38%), Positives = 78/143 (54%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V ++RA+E +E Y SIDLV++ + R+LRK KE+ H H + +E
Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHHNQSTKSVQNEDT 116
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
S D +T K E L VR KYF+M P+ + +A QL+++DHDFY FR
Sbjct: 117 QNFSSSDHS----LTEGK--EPHLPSPGVRRKYFEMTPMNIEQARVQLDLIDHDFYLFRE 170
Query: 88 EETGEINIVYKRKEGGYGLIIPK 20
EE + ++YKR GGYG+I K
Sbjct: 171 EEGSALRVIYKRNHGGYGVIQEK 193
[74][TOP]
>UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9211 RepID=A9BE19_PROM4
Length = 197
Score = 97.8 bits (242), Expect = 4e-19
Identities = 54/144 (37%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V ++RA+E ++ Y SIDLV++ + R+LRK KE+ +DH H G S +
Sbjct: 57 VTVFANGTVIRAQERSQNLYASIDLVATKLCRQLRKYKERHSDH-HHSHG-----HSASL 110
Query: 268 LPLPSGDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
P ED+ I+ + + E L +R KYF MPP++ +A QL+++DHDFY F+
Sbjct: 111 TPTTEAVVEDKAIDSSLIQGKEAHLPTPGIRRKYFSMPPMSTEQARHQLDLIDHDFYMFK 170
Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20
ET ++ ++Y+R GGYG+I K
Sbjct: 171 EIETQQLQVIYRRTHGGYGIIQAK 194
[75][TOP]
>UniRef100_Q0TND9 Ribosomal subunit interface protein n=6 Tax=Clostridium perfringens
RepID=Q0TND9_CLOP1
Length = 179
Score = 97.8 bits (242), Expect = 4e-19
Identities = 56/149 (37%), Positives = 88/149 (59%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V++ IL+R EE + Y SIDLV I+R++RK K + + R+ + L+F+
Sbjct: 50 IEVMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F
Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150
Query: 94 RNEETGEINIVYKRKEGGYGLIIPKGNGE 8
++ ET ++N+VYKRK+G YGLI P G GE
Sbjct: 151 QDPETNQLNVVYKRKDGNYGLIEP-GLGE 178
[76][TOP]
>UniRef100_Q0SR10 Ribosomal subunit interface protein n=1 Tax=Clostridium perfringens
SM101 RepID=Q0SR10_CLOPS
Length = 179
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/144 (37%), Positives = 85/144 (59%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V++ IL+R EE + Y SIDLV I+R++RK K + + R+ + L+F+
Sbjct: 50 VEVMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F
Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150
Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23
++ ET ++N+VYKRK+G YGLI P
Sbjct: 151 QDPETNQLNVVYKRKDGNYGLIEP 174
[77][TOP]
>UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CH01_9SYNE
Length = 195
Score = 97.4 bits (241), Expect = 6e-19
Identities = 50/141 (35%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEV 272
V V ++RA+E +E Y SIDL + + R+LR+ KE+ +DH H + ++V
Sbjct: 57 VTVFANGTVIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPSTDV 116
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+ ++ +E + + E EL + VR KYF MPP+ + +A QL+++DHDFY FR
Sbjct: 117 V------NDASPVESSLLQGREAELPDPGVRRKYFAMPPMGLEDARRQLDLIDHDFYLFR 170
Query: 91 NEETGEINIVYKRKEGGYGLI 29
+E+ ++ ++Y+R GGYG+I
Sbjct: 171 EKESDQLQVIYRRNHGGYGVI 191
[78][TOP]
>UniRef100_Q5KV92 Ribosomal protein S30EA n=1 Tax=Geobacillus kaustophilus
RepID=Q5KV92_GEOKA
Length = 183
Score = 95.5 bits (236), Expect = 2e-18
Identities = 56/142 (39%), Positives = 86/142 (60%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + + +L+RAEE E Y +IDLV+ ++R++RK K K + K +R K ++
Sbjct: 53 IEVTIPMPHLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKEAK 107
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ P+PSG E ++EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F
Sbjct: 108 LAAPVPSGASAAE-------NNEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 158
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
N ET NIVY+RK+G YGLI
Sbjct: 159 TNAETNRTNIVYRRKDGKYGLI 180
[79][TOP]
>UniRef100_A7NNI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Roseiflexus castenholzii DSM 13941
RepID=A7NNI5_ROSCS
Length = 198
Score = 95.5 bits (236), Expect = 2e-18
Identities = 51/144 (35%), Positives = 84/144 (58%)
Frame = -1
Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
V VV +LVRAE A Y +ID V +QR++ + K+K GR R + ++
Sbjct: 62 VTVVGDHGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDKHWRRGRL-----RRQGGQI 116
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+ LP + P DEEE +VRTK F + P+ EA++Q+E++ H F+ F+
Sbjct: 117 VEALPEMNAA-----APAPIDEEEQRPRIVRTKEFQVKPMYSDEAVEQMELLGHSFFIFQ 171
Query: 91 NEETGEINIVYKRKEGGYGLIIPK 20
+ +TG++N++Y+R++G YGLI+P+
Sbjct: 172 DADTGKLNVLYRRQDGNYGLIVPE 195
[80][TOP]
>UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
49176 RepID=C4G2X0_ABIDE
Length = 175
Score = 95.5 bits (236), Expect = 2e-18
Identities = 56/145 (38%), Positives = 81/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V V V+ ++RAE+ ++ Y SIDL+ II+R+LR+ K K D + F+
Sbjct: 50 VEVTVPVKGHIIRAEQVSDDMYVSIDLIEDIIERQLRRYKTKIVDSKQSASN-----FTS 104
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ Q DD E+ +V+RTK F + P+ EA Q+E+++H FY F
Sbjct: 105 AFM---------------QDDDYEDEDVKVIRTKRFAVKPMDPEEACVQMELLNHSFYVF 149
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
RN ET E+N+VYKRK G YGLI P+
Sbjct: 150 RNAETDEVNVVYKRKNGDYGLIEPE 174
[81][TOP]
>UniRef100_B9NGT0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NGT0_POPTR
Length = 71
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = -1
Query: 163 MPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGNGEVD 2
MPPLTV EAI+QLE VDHDFY FRNEETGEINIVYKRK GGYG IIPKGN E +
Sbjct: 1 MPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYKRKAGGYGPIIPKGNYEAE 54
[82][TOP]
>UniRef100_Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Deinococcus geothermalis DSM 11300
RepID=Q1IYK5_DEIGD
Length = 186
Score = 94.4 bits (233), Expect = 5e-18
Identities = 54/144 (37%), Positives = 78/144 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + V ++RAEEH Y +ID S +++R+LRK K K H + P
Sbjct: 56 VEVQLNVPNGIIRAEEHHADMYAAIDRASDVLERQLRKFKTKYLRHRQEAAPP------- 108
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
P P E D D+ E E+VRTK FD+ P++ +A+ Q+E + HDFY F
Sbjct: 109 ---PQPGLAEAD----VNAGLDDTEFRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYVF 161
Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23
+N +TG +VY+R++G YGLI P
Sbjct: 162 KNMDTGGCAVVYRRRDGHYGLIEP 185
[83][TOP]
>UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus
RepID=Q7VDH9_PROMA
Length = 195
Score = 94.0 bits (232), Expect = 6e-18
Identities = 52/146 (35%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS--- 278
V V ++RA+E ++ Y SIDLVS+ + R+LR+ KE+ +DH H +R +
Sbjct: 57 VTVFANGTVIRAQERSQNLYASIDLVSNKLCRQLRRYKERHSDH--HHSPGHRASITPTT 114
Query: 277 EVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98
E +L E+ I + + E +L + +R KYF M P+ + +A QL+++DHDFY
Sbjct: 115 EEVL------EDKSINGSLVEGKEAKLPKPGIRRKYFPMHPMNIEQAQHQLDLIDHDFYL 168
Query: 97 FRNEETGEINIVYKRKEGGYGLIIPK 20
F+ E+ ++ ++Y+RK GGYG+I K
Sbjct: 169 FKEAESEQLQVIYRRKNGGYGVIQAK 194
[84][TOP]
>UniRef100_B8BRE6 Light-repressed protein a n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BRE6_THAPS
Length = 198
Score = 94.0 bits (232), Expect = 6e-18
Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFSE 275
VV ++ R E + Y SIDLV++ + RKLRK KE+ D HG G N +E
Sbjct: 62 VVTTLKGTTFRVAESSPDMYASIDLVAARLARKLRKYKERRLDGYHGGPNMGEN---IAE 118
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
V+ + + ED E D ++ ++ +V T P+++ EAI L+ +DHDFY F
Sbjct: 119 VLNAIEVDESEDGAEEESYIDPDQAVVTKVKST------PISIKEAIFALDYIDHDFYVF 172
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
R+EET E+++VYKR GG GLI P+
Sbjct: 173 RDEETNEVSVVYKRNAGGVGLIQPE 197
[85][TOP]
>UniRef100_Q1AVJ5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ5_RUBXD
Length = 189
Score = 93.6 bits (231), Expect = 8e-18
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 14/171 (8%)
Frame = -1
Query: 493 NKLVAEAAVESI----PVVVVVEVEKI-------LVRAEEHAETTYGSIDLVSSIIQRKL 347
++ VA A VE I P + EV + +++A E +E Y SID +S ++R++
Sbjct: 34 DRSVARAEVELIHERNPSIAASEVAETTLFINGAVLKAREASEDMYASIDRMSDKLERQV 93
Query: 346 RKIKEKETD--HGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIE-EVVRT 176
++ + ++ D HGR LK E E P +EEE IE +VRT
Sbjct: 94 KRYRGRQVDRWHGR-------LK----------NHEGARAEPQPFVAEEEEDIEPRIVRT 136
Query: 175 KYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23
K F M P++ EA+ Q+E++DHDF+ F N +TG+IN+VY+R++G YGLI P
Sbjct: 137 KQFQMKPMSAEEAVLQMELLDHDFFVFTNADTGDINVVYRRRDGNYGLIEP 187
[86][TOP]
>UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH
Length = 178
Score = 93.6 bits (231), Expect = 8e-18
Identities = 55/145 (37%), Positives = 80/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + ++ +VRAE+ + Y SIDLV +I+R+L+K K K D + N F +
Sbjct: 50 IEVTIPMKGNIVRAEQVSNDMYASIDLVEEVIERQLKKYKSKLKDMNQSAANFNPSFFED 109
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
V+ ED DEE++ + R K F M P+ EA Q+E++ H+FY F
Sbjct: 110 VL-------NEDS--------DEEDI--NITRVKRFAMKPMDAEEACVQMELLGHNFYVF 152
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
RN ET E+N+VYKRK YGLI P+
Sbjct: 153 RNAETDEVNVVYKRKGNSYGLIEPE 177
[87][TOP]
>UniRef100_C6D4V5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Paenibacillus sp. JDR-2 RepID=C6D4V5_PAESJ
Length = 182
Score = 93.2 bits (230), Expect = 1e-17
Identities = 62/180 (34%), Positives = 98/180 (54%), Gaps = 9/180 (5%)
Frame = -1
Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIP---------VVVVVEVEKILVRAEEHAETTY 389
T A++ VK+++ + A A+ ++ V V + + +++RAE+ +E Y
Sbjct: 13 TEALREYAVKKISRLEKYFEAPASETTVTLSVTKGKHAVEVTIPLVGVMLRAEDKSEDMY 72
Query: 388 GSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDD 209
SID+V ++R++RK K K RH G L F E G + + + D+
Sbjct: 73 SSIDVVVDKLERQIRKHKTKMNRKFRHESGVKAL-FKE-------GLSQTAVSVM---DE 121
Query: 208 EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
E+EL E+VRTK F + P+ V EAI Q+ MV H+F+ F N + E+N+VYKR +G YGLI
Sbjct: 122 EDEL--ELVRTKRFMLKPMDVEEAILQMNMVGHNFFVFSNIDNKEVNVVYKRSDGKYGLI 179
[88][TOP]
>UniRef100_C4L5L1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Exiguobacterium sp. AT1b RepID=C4L5L1_EXISA
Length = 187
Score = 93.2 bits (230), Expect = 1e-17
Identities = 57/149 (38%), Positives = 82/149 (55%)
Frame = -1
Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287
E V V + + +L+RAE+ Y +IDLV ++R++RK K K GR +G
Sbjct: 49 EKQKVEVTIPMPNLLLRAEDINLDMYAAIDLVVDKLERQIRKHKTKLNRKGRGKEGG--- 105
Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107
E L D+ TP DE+E E+VRTK F + P+ EAI Q++M+ H
Sbjct: 106 -VGEYFKSLEGPDD------TPAVYDEDEAELELVRTKRFTLKPMDTEEAILQMDMLGHS 158
Query: 106 FYAFRNEETGEINIVYKRKEGGYGLIIPK 20
F+ F + ETG N+VY+RK+G YGLI P+
Sbjct: 159 FFVFSDAETGNTNVVYRRKDGKYGLIEPE 187
[89][TOP]
>UniRef100_A7GUW3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GUW3_BACCN
Length = 179
Score = 93.2 bits (230), Expect = 1e-17
Identities = 63/145 (43%), Positives = 83/145 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +L+RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 50 VEVTIPFTDLLLRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSAKTAF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP G EE + E+EL E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILPDQLGQEEVQ---------EDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 154
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E NIVY RK+G YGLI K
Sbjct: 155 TNADTNETNIVYGRKDGKYGLIEAK 179
[90][TOP]
>UniRef100_C8W7H2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Atopobium parvulum DSM 20469 RepID=C8W7H2_ATOPD
Length = 196
Score = 93.2 bits (230), Expect = 1e-17
Identities = 55/143 (38%), Positives = 78/143 (54%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V V +VR ++ Y +ID + + R+LRK K K + HMK SE
Sbjct: 59 VTVFVRNNVVRVTASSDDMYAAIDEAADKVSRQLRKYKTKVVERRHHMK-------SERG 111
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
+ L D + IEI E+L +++VR KY D+ P+T EA+ Q +++ HDFY F N
Sbjct: 112 IALTQEDLANLIEIPA-----EDLDDQLVREKYVDLEPMTEEEALVQTDLLGHDFYVFVN 166
Query: 88 EETGEINIVYKRKEGGYGLIIPK 20
TG N++Y RK GGYG+I PK
Sbjct: 167 SSTGLTNVIYHRKNGGYGIIKPK 189
[91][TOP]
>UniRef100_C2D8Z3 Possible ribosome-associated inhibitor A n=1 Tax=Atopobium vaginae
DSM 15829 RepID=C2D8Z3_9ACTN
Length = 192
Score = 93.2 bits (230), Expect = 1e-17
Identities = 55/143 (38%), Positives = 73/143 (51%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V V V +VR E +E Y +ID S + R+LRK K + D + + P
Sbjct: 59 VTVYVRNNVVRVEASSEDMYAAIDAASDKVTRQLRKYKTRIIDRKQRSQAP--------- 109
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
P PS D D I+ D +VR KY D+ P+T EA+ Q +++ HDFY F N
Sbjct: 110 APAPSKDLSDLIDEVADDD-------MLVREKYIDLHPMTEEEALVQTDLIGHDFYVFEN 162
Query: 88 EETGEINIVYKRKEGGYGLIIPK 20
TG IN+VY R GGYG+I PK
Sbjct: 163 ATTGLINVVYHRHNGGYGIIKPK 185
[92][TOP]
>UniRef100_A8S366 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
BAA-613 RepID=A8S366_9CLOT
Length = 187
Score = 93.2 bits (230), Expect = 1e-17
Identities = 56/145 (38%), Positives = 85/145 (58%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ +RAEE + Y SIDLV II+R++R+ ++K D K + FS+
Sbjct: 61 IEVTIPVKGNTIRAEESSTDMYVSIDLVEEIIERQIRRYRKKLID-----KKQAAISFSQ 115
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ +EEDE++ DDE + +V+TK F + P EA Q+EM+ H+FY F
Sbjct: 116 AFI-----EEEDEVQ-----DDEIQ----IVKTKKFAIKPTIPEEACLQMEMLGHNFYVF 161
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T ++N+VYKRK G YGLI P+
Sbjct: 162 LNADTDQVNVVYKRKNGTYGLIEPE 186
[93][TOP]
>UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
16795 RepID=B0A7Y1_9CLOT
Length = 187
Score = 92.8 bits (229), Expect = 1e-17
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
Frame = -1
Query: 511 EVAAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 332
EV V+ A+ +E V ++ + ++RAE+ E Y +ID+V + ++LR+ K
Sbjct: 42 EVKVTVSARKAKQKIE----VTIIPINGPIIRAEDSEENLYAAIDVVYDKLNKQLRRYKN 97
Query: 331 KETDHGRHM-KGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPP 155
K G++ KG ++F + E KD E +++ E R K FDM P
Sbjct: 98 KLK--GKYQSKGQESIRFQNI-----------EDNAAEDKDGEFDIVIE--RHKKFDMKP 142
Query: 154 LTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
++ EA+ Q+E+V HDFY FRN +T EI+IVY+R+ GGYGLI
Sbjct: 143 MSPEEAVLQMELVGHDFYMFRNIDTDEISIVYRRETGGYGLI 184
[94][TOP]
>UniRef100_C5EVT1 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
1_7_47FAA RepID=C5EVT1_9FIRM
Length = 187
Score = 92.4 bits (228), Expect = 2e-17
Identities = 55/145 (37%), Positives = 84/145 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ +RAEE + Y SIDLV +I+R++R+ ++K D K + FS+
Sbjct: 61 IEVTIPVKGNTIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAAISFSQ 115
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ +EEDE++ DDE + +V+TK F + P EA Q+EM+ H FY F
Sbjct: 116 AFI-----EEEDEVQ-----DDEIQ----IVKTKKFAIKPTIPEEACLQMEMLGHSFYVF 161
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T ++N+VYKRK G YGLI P+
Sbjct: 162 LNADTDQVNVVYKRKNGTYGLIEPE 186
[95][TOP]
>UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N7A9_9CHLO
Length = 245
Score = 92.4 bits (228), Expect = 2e-17
Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH--GRHMKGPNRLKFSE 275
V V +VR+EE A+ Y SID VS I+RKLRKIKEK+ G+ P + + ++
Sbjct: 105 VTVYTRNGVVRSEEEADNLYASIDAVSDKIERKLRKIKEKKNSKKAGKTKANP-KAQTAD 163
Query: 274 VILPLPSGDE--EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 101
++ DE DEIE EE V KY + T EA +++E + H FY
Sbjct: 164 IVAAAAEADEARADEIE-----------FEETVGVKYMAVKTSTAMEAAEEMESLGHVFY 212
Query: 100 AFRNEET-GEINIVYKRKEGGYGLIIP 23
AF+N+ GE+N+VYKR GGY +++P
Sbjct: 213 AFKNKANGGEVNVVYKRDAGGYAVLVP 239
[96][TOP]
>UniRef100_Q04E96 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Oenococcus oeni PSU-1 RepID=Q04E96_OENOB
Length = 190
Score = 92.0 bits (227), Expect = 2e-17
Identities = 52/146 (35%), Positives = 84/146 (57%)
Frame = -1
Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287
++ + V + + + +RAEE Y ++DLVS+ + R++RK K + R +G +
Sbjct: 50 KTFKIEVTIPLPYLTLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGI 108
Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107
F+E I P+PS ED+ K D V+R K + P+ + EA+ Q+EM+DHD
Sbjct: 109 DFNEAIDPVPSDTNEDK------KID-------VIRRKNLSLKPMDIEEAVLQMEMLDHD 155
Query: 106 FYAFRNEETGEINIVYKRKEGGYGLI 29
F+ F N +T +++IVYKR +G YGLI
Sbjct: 156 FFLFLNSDTNQLDIVYKRDDGKYGLI 181
[97][TOP]
>UniRef100_C1CWW9 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Deinococcus deserti VCD115 RepID=C1CWW9_DEIDV
Length = 188
Score = 92.0 bits (227), Expect = 2e-17
Identities = 53/144 (36%), Positives = 79/144 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + V ++RAEEH Y +ID S +++R+LRK K R+MK +
Sbjct: 56 VEVQLNVPNGIIRAEEHHSDMYAAIDKASDVLERQLRKFKT------RYMKQRHET---- 105
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+P P G E ++ DD E + E+VR K FDM P++ +A+ Q+E + HDFY F
Sbjct: 106 --VPQP-GPGPAEADVNAGLDDVSEFMPEIVRQKRFDMRPMSPEDAVTQMEALGHDFYVF 162
Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23
N + +VY+R++G YGLI P
Sbjct: 163 MNMGSNACGVVYRRRDGHYGLIEP 186
[98][TOP]
>UniRef100_B1YLH2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Exiguobacterium sibiricum 255-15 RepID=B1YLH2_EXIS2
Length = 187
Score = 92.0 bits (227), Expect = 2e-17
Identities = 57/149 (38%), Positives = 82/149 (55%)
Frame = -1
Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287
E V V + + +L+RAE+ Y +IDLV ++R++RK K K GR G
Sbjct: 49 EKQKVEVTIPMPNLLLRAEDVNGDMYAAIDLVVDKLERQIRKHKTKINRRGRAKDGGIGE 108
Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107
F + E E E ++DE EL E+VRTK F + P+ EAI Q++M+ H
Sbjct: 109 YFKTL--------EGPEAEAPVYEEDEAEL--ELVRTKRFTLKPMDTEEAILQMDMLGHT 158
Query: 106 FYAFRNEETGEINIVYKRKEGGYGLIIPK 20
F+ F + ETG N+VY+RK+G YGLI P+
Sbjct: 159 FFVFSDAETGNTNVVYRRKDGRYGLIEPE 187
[99][TOP]
>UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
27756 RepID=A5KKP2_9FIRM
Length = 198
Score = 92.0 bits (227), Expect = 2e-17
Identities = 52/146 (35%), Positives = 83/146 (56%), Gaps = 1/146 (0%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ ++R+E+ + Y SIDLV +I+R+LRK K K +
Sbjct: 63 IEVTIPVKGSIIRSEQTSSDMYVSIDLVEEVIERQLRKYKNKLVAKSQ----------GH 112
Query: 274 VILPLPSGDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98
+PSG + E IE + D++E+ +VRTK F + P+ +A Q+E++ H F+
Sbjct: 113 PTAAVPSGSIKKEFIESDDESSDDDEI--RIVRTKKFGIKPMFPEDACIQMELLGHSFFV 170
Query: 97 FRNEETGEINIVYKRKEGGYGLIIPK 20
F N ET E+N+VYKRK+G +GLI P+
Sbjct: 171 FSNAETDEVNVVYKRKDGSFGLIEPE 196
[100][TOP]
>UniRef100_A0NI00 Ribosomal subunit interface protein n=1 Tax=Oenococcus oeni ATCC
BAA-1163 RepID=A0NI00_OENOE
Length = 190
Score = 92.0 bits (227), Expect = 2e-17
Identities = 52/146 (35%), Positives = 84/146 (57%)
Frame = -1
Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287
++ + V + + + +RAEE Y ++DLVS+ + R++RK K + R +G +
Sbjct: 50 KTFKIEVTIPLPYLTLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGI 108
Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107
F+E I P+PS ED+ K D V+R K + P+ + EA+ Q+EM+DHD
Sbjct: 109 DFNEAIDPVPSDTNEDK------KID-------VIRRKTLSLKPMDIEEAVLQMEMLDHD 155
Query: 106 FYAFRNEETGEINIVYKRKEGGYGLI 29
F+ F N +T +++IVYKR +G YGLI
Sbjct: 156 FFLFLNSDTNQLDIVYKRDDGKYGLI 181
[101][TOP]
>UniRef100_C2KX79 Ribosome-associated inhibitor A n=1 Tax=Oribacterium sinus F0268
RepID=C2KX79_9FIRM
Length = 176
Score = 91.7 bits (226), Expect = 3e-17
Identities = 53/145 (36%), Positives = 81/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ ++RAEE Y SIDLV +++R++RK K K RH
Sbjct: 50 IEVTIPVKGSVIRAEEATPDMYQSIDLVVDVLERQIRKYKNKLIQ--RHQAA-------- 99
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
S + IE P +D+EE ++VRTK+ D+ P+T EA Q+E++ H F+ F
Sbjct: 100 ------SDFSSEFIEEKPAQDEEEI---KIVRTKHIDLKPMTAEEACLQMELLGHSFFVF 150
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
++ TG++N+VYKRK YGLI P+
Sbjct: 151 QDGNTGKVNVVYKRKANSYGLIEPE 175
[102][TOP]
>UniRef100_C0CVD1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
DSM 15981 RepID=C0CVD1_9CLOT
Length = 176
Score = 91.7 bits (226), Expect = 3e-17
Identities = 53/145 (36%), Positives = 80/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ +RAEE + Y SIDLV +I+R++R+ ++K D K L FS+
Sbjct: 50 IEVTIPVKGNTIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAALSFSQ 104
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ ++ED+I I V+TK F + P EA Q+EM+ H+FY F
Sbjct: 105 AFIDEEEDEQEDDIRI--------------VKTKKFAIKPTIPEEACLQMEMLGHNFYVF 150
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T ++N+VYKRK G YGLI P+
Sbjct: 151 LNSDTDQVNVVYKRKNGTYGLIEPE 175
[103][TOP]
>UniRef100_B9I261 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I261_POPTR
Length = 118
Score = 91.7 bits (226), Expect = 3e-17
Identities = 47/90 (52%), Positives = 60/90 (66%)
Frame = -1
Query: 352 KLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTK 173
KLRKIK+KE+DHGRHMKG N+LK E P E + + T + +++ ++E V TK
Sbjct: 28 KLRKIKDKESDHGRHMKGFNKLKVRE-----PMSQEVENVADTVSQRKDDDNLDEAVHTK 82
Query: 172 YFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 83
YFDMPPLTV EAI +L VDH FY F + E
Sbjct: 83 YFDMPPLTVHEAIVRLGNVDHAFYGFGHAE 112
[104][TOP]
>UniRef100_A5UVY5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Roseiflexus sp. RS-1 RepID=A5UVY5_ROSS1
Length = 193
Score = 91.3 bits (225), Expect = 4e-17
Identities = 52/145 (35%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Frame = -1
Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
V VV +LVRAE A Y +ID V +QR++ + K+K H R +G R + ++
Sbjct: 57 VTVVGDHGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDK---HWR--RGKLRRQGGQI 111
Query: 271 ILPLPSGDEEDEIEITPQKD-DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ LP E+ D EEE +VRTK F + P+ EA++Q+E++ H+F+ F
Sbjct: 112 VEALP------ELAAPSLADTQEEEERPRIVRTKEFQVKPMYSDEAVEQMELLGHNFFIF 165
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
++ +TG++N++Y+R++G YGLI+P+
Sbjct: 166 QDADTGKLNVLYRRQDGNYGLIVPE 190
[105][TOP]
>UniRef100_Q7XYJ6 Ribosomal protein rpS22 (Fragment) n=1 Tax=Bigelowiella natans
RepID=Q7XYJ6_BIGNA
Length = 170
Score = 91.3 bits (225), Expect = 4e-17
Identities = 64/172 (37%), Positives = 88/172 (51%), Gaps = 14/172 (8%)
Frame = -1
Query: 493 NKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG 314
N V E A I V V V+ K+ +R + + Y SIDLV+ ++ RKLRK KE++ G
Sbjct: 6 NPAVKENA-HKIEVTVYVKDSKV-IRGSVSSVSEYSSIDLVTDLVNRKLRKYKERK--EG 61
Query: 313 RHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIE--------------EVVRT 176
+ R ++ I D D Q D+ + E VVR
Sbjct: 62 KRTASGVRTFYTNDI-----SDSSDVEGAAVQGQDDVQQEEYSGIPEGYAPVEDVSVVRR 116
Query: 175 KYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
K F MPP+++ +A L+ +DHDFY FRN ET EIN+VY+R EGG GLI P+
Sbjct: 117 KKFPMPPISIEDATLCLDYLDHDFYVFRNSETKEINVVYRRAEGGVGLIEPE 168
[106][TOP]
>UniRef100_C0Z6T8 Putative uncharacterized protein yvyD n=1 Tax=Brevibacillus brevis
NBRC 100599 RepID=C0Z6T8_BREBN
Length = 185
Score = 90.9 bits (224), Expect = 5e-17
Identities = 47/145 (32%), Positives = 85/145 (58%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + + +++RAEE E Y +IDLV ++R++RK K K R ++ + + ++
Sbjct: 52 IEVTIPLSGVIIRAEETHEDMYAAIDLVVEKLERQIRKHKTKLM---RKLRVDSTGRIAQ 108
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
E + + DEE++ ++VRTK FD+ P+ EA+ Q++M+ H F+ F
Sbjct: 109 --------RESQPVAVMIPDVDEEDIDIDIVRTKRFDLKPMDAQEAVMQMDMLGHSFFVF 160
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
+N +T ++++VY+R +G YGLI PK
Sbjct: 161 QNSDTNDVSVVYRRNDGRYGLIEPK 185
[107][TOP]
>UniRef100_Q2B1U0 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. NRRL
B-14911 RepID=Q2B1U0_9BACI
Length = 184
Score = 90.9 bits (224), Expect = 5e-17
Identities = 55/142 (38%), Positives = 80/142 (56%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + ++ +++RAEE E Y +IDL+ ++R++RK K K R KG L F+
Sbjct: 53 VEVTIPMQNLVLRAEEDHEDMYAAIDLIVDKLERQIRKHKTKVNRKFRE-KGSPTLMFAS 111
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
DE E ++++ +L EVVR K FD+ P+ EAI Q+ ++ H FY F
Sbjct: 112 F----------DEPEAPVLEEEDNDL--EVVRQKSFDLKPMDNEEAILQMNLLGHSFYVF 159
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
N ET N+VYKRK+G YGLI
Sbjct: 160 TNAETNRTNVVYKRKDGRYGLI 181
[108][TOP]
>UniRef100_C8NDQ1 Ribosomal subunit interface protein n=1 Tax=Granulicatella adiacens
ATCC 49175 RepID=C8NDQ1_9LACT
Length = 186
Score = 90.9 bits (224), Expect = 5e-17
Identities = 53/142 (37%), Positives = 83/142 (58%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + +++RAEE + YGSIDLV ++R++RK K K + +R K +
Sbjct: 60 VEVTIPLPYLVLRAEETSIDLYGSIDLVVDKLERQVRKHKTK-------INRKSREKGFD 112
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
++LP P+ +EEE E+VRTK D+ P+ EA+ Q+ M+ H+F+ +
Sbjct: 113 IVLPT-----------LPEAPEEEETGLEIVRTKRIDLKPMDSEEAVLQMNMLGHNFFIY 161
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
++ ET E NIVY+RK+G YGLI
Sbjct: 162 QDAETNETNIVYRRKDGKYGLI 183
[109][TOP]
>UniRef100_C6PFL3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermoanaerobacter italicus Ab9 RepID=C6PFL3_9THEO
Length = 181
Score = 90.9 bits (224), Expect = 5e-17
Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 9/182 (4%)
Frame = -1
Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVV--------VVVEVEKILVRAEEHAETTYG 386
T ++ VVK+V+ + + V ++ V + + + I+ RAEE ++ YG
Sbjct: 14 TDGLRDAVVKKVSKLSKYFTEDTEVRTVLSVQKNHHIAEITIPFKGIIFRAEEVSDDMYG 73
Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI-LPLPSGDEEDEIEITPQKDD 209
SID V I+R++ K K K NR +E I +PS +E K++
Sbjct: 74 SIDRVVDKIERQILKHKTKLK---------NRFGANESIRFEIPSVYQE-------AKEE 117
Query: 208 EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
EEE E+V+TK F + P++ EAI Q+ ++ H+F+ F N +T IN+VYKRK+G YGLI
Sbjct: 118 EEETSFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKYGLI 177
Query: 28 IP 23
P
Sbjct: 178 EP 179
[110][TOP]
>UniRef100_B7IPV2 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
RepID=B7IPV2_BACC2
Length = 180
Score = 90.9 bits (224), Expect = 5e-17
Identities = 60/145 (41%), Positives = 80/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +L+RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVMDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[111][TOP]
>UniRef100_B4BN91 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. G11MC16 RepID=B4BN91_9BACI
Length = 182
Score = 90.9 bits (224), Expect = 5e-17
Identities = 54/142 (38%), Positives = 84/142 (59%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + + +L+RAEE + Y +IDLV+ ++R++RK K K + K +R K +
Sbjct: 53 IEVTIPIPHLLLRAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVK 107
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ P+P+G E +DEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F
Sbjct: 108 LAAPVPNGAAAAE-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
N ET NIVY+RK+G YGLI
Sbjct: 158 TNAETNRTNIVYRRKDGRYGLI 179
[112][TOP]
>UniRef100_B0G387 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC
27755 RepID=B0G387_9FIRM
Length = 177
Score = 90.9 bits (224), Expect = 5e-17
Identities = 51/145 (35%), Positives = 84/145 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ ++R+E+ ++ Y SIDLV +I+R+LRK K K ++ +G N FS+
Sbjct: 50 IEVTIPVKGNIIRSEQESDDMYVSIDLVEEVIERQLRKYKNKLV--AKNQEGNN---FSK 104
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ E+DE++I VRTK F + P+ +A Q+E++ H+F+ F
Sbjct: 105 TLFETEESIEDDEVKI--------------VRTKRFGIKPMYPEDACVQMELLGHNFFVF 150
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N E E+N+VYKRK+G +GLI P+
Sbjct: 151 FNAENEEVNVVYKRKDGSFGLIEPE 175
[113][TOP]
>UniRef100_A4ISU0 Ribosomal subunit interface protein n=1 Tax=Geobacillus
thermodenitrificans NG80-2 RepID=A4ISU0_GEOTN
Length = 182
Score = 90.5 bits (223), Expect = 7e-17
Identities = 54/142 (38%), Positives = 84/142 (59%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + + +L+RAEE + Y +IDLV+ ++R++RK K K + K +R K +
Sbjct: 53 IEVTIPIPHLLLRAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVK 107
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ P+P+G E +DEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F
Sbjct: 108 LAAPVPNGAAAVE-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
N ET NIVY+RK+G YGLI
Sbjct: 158 TNAETNRTNIVYRRKDGRYGLI 179
[114][TOP]
>UniRef100_B5UPY3 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
RepID=B5UPY3_BACCE
Length = 180
Score = 90.5 bits (223), Expect = 7e-17
Identities = 60/145 (41%), Positives = 80/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +L+RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[115][TOP]
>UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
13814 RepID=A6BHR0_9FIRM
Length = 178
Score = 90.5 bits (223), Expect = 7e-17
Identities = 57/145 (39%), Positives = 83/145 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ LVR+E+ + Y SIDLV +I+R+LRK K K R +G N F +
Sbjct: 50 IEVTIPVKGGLVRSEQESSDMYVSIDLVEEVIERQLRKYKNKLV--AREQEGGN---FKQ 104
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
D ED IE D+ E+ ++VRTK F P+ +A Q+E++ HDFY F
Sbjct: 105 EFF-----DAEDNIE------DDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFYVF 151
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N E+ E+N+VY+RK G +GLI P+
Sbjct: 152 CNAESDEVNVVYRRKNGTFGLIEPE 176
[116][TOP]
>UniRef100_B9RPC0 LRX1, putative n=1 Tax=Ricinus communis RepID=B9RPC0_RICCO
Length = 538
Score = 90.5 bits (223), Expect = 7e-17
Identities = 39/50 (78%), Positives = 40/50 (80%), Gaps = 7/50 (14%)
Frame = +1
Query: 409 PQPAPVFSPPPPPP---PPVYSPPPPPPPVYSPPPPP----PSPPPPSPP 537
P P PV+SPPPPPP PPVYSPPPPPPPVYSPPPPP P PPPPSPP
Sbjct: 259 PPPPPVYSPPPPPPSPPPPVYSPPPPPPPVYSPPPPPPVYSPPPPPPSPP 308
Score = 89.7 bits (221), Expect = 1e-16
Identities = 40/57 (70%), Positives = 41/57 (71%), Gaps = 14/57 (24%)
Frame = +1
Query: 409 PQPAPVFSPPPPPP------PPVYSPPPPP--------PPVYSPPPPPPSPPPPSPP 537
P P PV+SPPPPPP PPVYSPPPPP PPVYSPPPPPPSPPPPSPP
Sbjct: 292 PPPPPVYSPPPPPPSPPPPPPPVYSPPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPP 348
Score = 85.5 bits (210), Expect = 2e-15
Identities = 35/43 (81%), Positives = 35/43 (81%)
Frame = +1
Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537
P P P PPPPPPPVYS PPPPPPVYSPPPPPPSPPPP PP
Sbjct: 272 PSPPPPVYSPPPPPPPVYS-PPPPPPVYSPPPPPPSPPPPPPP 313
Score = 79.0 bits (193), Expect = 2e-13
Identities = 36/53 (67%), Positives = 38/53 (71%), Gaps = 8/53 (15%)
Frame = +1
Query: 409 PQPAPVFSPPPPP---PPPVY---SPPPPPPPVYSPPPPP--PSPPPPSPPSC 543
P P+P SPPPPP PPP+Y SPPPPP PVYSPPPPP PPPPSPP C
Sbjct: 405 PPPSPPHSPPPPPHSPPPPIYPYLSPPPPPHPVYSPPPPPVYSPPPPPSPPPC 457
Score = 75.9 bits (185), Expect = 2e-12
Identities = 37/53 (69%), Positives = 38/53 (71%), Gaps = 11/53 (20%)
Frame = +1
Query: 409 PQPAPVFSPPP----PPPPPVYSPPPPPP----PVYSPPPPPP---SPPPPSP 534
P P PV+ PPP PPPPPVYSPPPPPP PVYSPPPPPP SPPPP P
Sbjct: 245 PSP-PVYLPPPVYSPPPPPPVYSPPPPPPSPPPPVYSPPPPPPPVYSPPPPPP 296
Score = 75.5 bits (184), Expect = 2e-12
Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 6/53 (11%)
Frame = +1
Query: 400 LHAPQPAPVFSPPPPP-PPPVYSPPPPPP-PVYSPPPPPPSPPPPS----PPS 540
+++P P PV+SPPPPP PPP PPPPPP YSPPPP PSPPPP+ PPS
Sbjct: 437 VYSPPPPPVYSPPPPPSPPPCIEPPPPPPCAEYSPPPPSPSPPPPTQYKPPPS 489
Score = 75.1 bits (183), Expect = 3e-12
Identities = 35/43 (81%), Positives = 35/43 (81%), Gaps = 2/43 (4%)
Frame = +1
Query: 415 PAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPP--SPP 537
P PV SPP PPPVYSPPPPPP VYSPPPPPPSPPPP SPP
Sbjct: 241 PMPVPSPPVYLPPPVYSPPPPPP-VYSPPPPPPSPPPPVYSPP 282
Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/53 (66%), Positives = 36/53 (67%), Gaps = 8/53 (15%)
Frame = +1
Query: 409 PQPAPVFSPPPPP-------PPPVYSPPPPPPPVYSPPPPPPSPPPPSP-PSC 543
P P PV+SPPPPP PPPVYSPPPPP P PPPPSPPPPSP P C
Sbjct: 309 PPPPPVYSPPPPPSPPPPSPPPPVYSPPPPP-----PSPPPPSPPPPSPLPPC 356
Score = 73.6 bits (179), Expect = 9e-12
Identities = 31/43 (72%), Positives = 33/43 (76%)
Frame = +1
Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537
P P P+FSPPPP P YS PPPP P +SPPPPP SPPPPSPP
Sbjct: 369 PPPPPLFSPPPPTPY-YYSSPPPPSPPHSPPPPPHSPPPPSPP 410
Score = 72.0 bits (175), Expect = 3e-11
Identities = 36/59 (61%), Positives = 37/59 (62%), Gaps = 15/59 (25%)
Frame = +1
Query: 403 HAPQPA--PVFSPPPPP-------PPPVYSPPPPP--PPVYSPPPPPP----SPPPPSP 534
H+P P P SPPPPP PPPVYSPPPPP PP PPPPPP SPPPPSP
Sbjct: 418 HSPPPPIYPYLSPPPPPHPVYSPPPPPVYSPPPPPSPPPCIEPPPPPPCAEYSPPPPSP 476
Score = 70.1 bits (170), Expect = 1e-10
Identities = 34/58 (58%), Positives = 35/58 (60%), Gaps = 11/58 (18%)
Frame = +1
Query: 403 HAPQPAPVFSPPP--------PPPPPVYSPPPPPPPVYSPPPPPPSPP---PPSPPSC 543
H+P P P PPP PPP PVYS PPPPPVYSPPPPP PP PP PP C
Sbjct: 411 HSPPPPPHSPPPPIYPYLSPPPPPHPVYS--PPPPPVYSPPPPPSPPPCIEPPPPPPC 466
Score = 69.7 bits (169), Expect = 1e-10
Identities = 31/45 (68%), Positives = 33/45 (73%), Gaps = 4/45 (8%)
Frame = +1
Query: 415 PAPVFSPPPPPP-PPVYSPPPP---PPPVYSPPPPPPSPPPPSPP 537
P PV+SPPPPPP PP SPPPP PP V PPPPPP+ PPP PP
Sbjct: 329 PPPVYSPPPPPPSPPPPSPPPPSPLPPCVRPPPPPPPNSPPPPPP 373
Score = 68.9 bits (167), Expect = 2e-10
Identities = 30/47 (63%), Positives = 33/47 (70%), Gaps = 4/47 (8%)
Frame = +1
Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPP----SPPPPSPP 537
P P P PPPPPPP + PPPPPP++SPPPP P SPPPPSPP
Sbjct: 350 PSPLPPCVRPPPPPPP--NSPPPPPPLFSPPPPTPYYYSSPPPPSPP 394
Score = 65.9 bits (159), Expect = 2e-09
Identities = 31/50 (62%), Positives = 34/50 (68%), Gaps = 7/50 (14%)
Frame = +1
Query: 409 PQPAPVF--SPPPP-----PPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537
P P P + SPPPP PPPP +SPPPP PP +SPPPPP SPPPP P
Sbjct: 378 PPPTPYYYSSPPPPSPPHSPPPPPHSPPPPSPP-HSPPPPPHSPPPPIYP 426
Score = 65.1 bits (157), Expect = 3e-09
Identities = 30/52 (57%), Positives = 30/52 (57%), Gaps = 9/52 (17%)
Frame = +1
Query: 409 PQPAPVFSPPPPPPPPVYSPPP----PPPPVYSPPPPPPSPPPP-----SPP 537
P P P PPPPPP YSPPP PPPP PPP PSPPPP SPP
Sbjct: 452 PSPPPCIEPPPPPPCAEYSPPPPSPSPPPPTQYKPPPSPSPPPPPVHYYSPP 503
Score = 65.1 bits (157), Expect = 3e-09
Identities = 31/52 (59%), Positives = 33/52 (63%), Gaps = 10/52 (19%)
Frame = +1
Query: 409 PQPAPVFSPPPP----PPPPVYSPPP----PPPPV--YSPPPPPPSPPPPSP 534
P P +SPPPP PPP Y PPP PPPPV YSPPPP SPPPP+P
Sbjct: 463 PPPCAEYSPPPPSPSPPPPTQYKPPPSPSPPPPPVHYYSPPPPSQSPPPPAP 514
Score = 64.7 bits (156), Expect = 4e-09
Identities = 29/46 (63%), Positives = 30/46 (65%), Gaps = 7/46 (15%)
Frame = +1
Query: 421 PVFSPPPPPPPPVYSPPPP---PPPVYSPPPPP----PSPPPPSPP 537
P PPPP PP+ P PP PPPVYSPPPPP P PPPPSPP
Sbjct: 230 PTLPAPPPPSPPMPVPSPPVYLPPPVYSPPPPPPVYSPPPPPPSPP 275
[117][TOP]
>UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJW3_9ROSI
Length = 268
Score = 90.5 bits (223), Expect = 7e-17
Identities = 51/80 (63%), Positives = 60/80 (75%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
+VRAEE AET Y SIDL SSIIQRKLRKIK+KE+DHGRHMKG NRLK E P+ E
Sbjct: 153 VVRAEEDAETIYASIDLASSIIQRKLRKIKDKESDHGRHMKGFNRLKVRE---PMHQVVE 209
Query: 244 EDEIEITPQKDDEEELIEEV 185
+D E++ Q+D E+ IEEV
Sbjct: 210 DDADEVSQQED--EDYIEEV 227
[118][TOP]
>UniRef100_Q8ENI5 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis
RepID=Q8ENI5_OCEIH
Length = 185
Score = 90.1 bits (222), Expect = 9e-17
Identities = 50/144 (34%), Positives = 83/144 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + + +L+R E Y ++DLV ++R++RK K K R P F+E
Sbjct: 52 IEVTIPMTNLLLRGEVQHIDLYAAVDLVVDKLERQIRKHKTKINRKFRQNGSPKHA-FAE 110
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ E E + ++DE +L E+VRTK F++ P+ EAI Q++M+ H+F+ F
Sbjct: 111 M---------EKEARLAEDEEDENQL--EIVRTKRFNLKPMDSEEAILQMDMLGHEFFVF 159
Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23
N+++GE N+VY+R++G YGLI P
Sbjct: 160 TNDDSGETNVVYRRRDGKYGLIEP 183
[119][TOP]
>UniRef100_C5VNV1 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum D
str. 1873 RepID=C5VNV1_CLOBO
Length = 178
Score = 90.1 bits (222), Expect = 9e-17
Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKF 281
V V + +++RAEE Y +IDLV ++R++RK K K + HG + LKF
Sbjct: 50 VEVTIPFNGVILRAEEANNDMYAAIDLVLEKLERQIRKQKTKLEKRKHG------DALKF 103
Query: 280 SEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 101
+ +P KD E+ + ++V+TK F + P++ EA+ Q+E++ H+F+
Sbjct: 104 QFIPEYIP-------------KDAEDNVESKIVKTKKFAVKPMSNEEAVLQMELLGHNFF 150
Query: 100 AFRNEETGEINIVYKRKEGGYGLIIPK 20
FRN +T E+N++YKRK+G YGLI P+
Sbjct: 151 VFRNSDTDEVNVLYKRKDGQYGLIEPE 177
[120][TOP]
>UniRef100_C9RVC1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Geobacillus RepID=C9RVC1_9BACI
Length = 182
Score = 90.1 bits (222), Expect = 9e-17
Identities = 54/142 (38%), Positives = 83/142 (58%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + + +L+RAEE E Y +IDLV+ ++R++RK K K + K +R K ++
Sbjct: 53 IEVTIPIPHLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKEAK 107
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ P+ G E +EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F
Sbjct: 108 LAAPVSIGASAAE--------NEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
N ET NIVY+RK+G YGLI
Sbjct: 158 TNAETNRTNIVYRRKDGKYGLI 179
[121][TOP]
>UniRef100_C2U573 Ribosome-associated factor Y n=3 Tax=Bacillus cereus
RepID=C2U573_BACCE
Length = 180
Score = 90.1 bits (222), Expect = 9e-17
Identities = 60/145 (41%), Positives = 80/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +L+RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[122][TOP]
>UniRef100_B7HEI9 Ribosomal subunit interface protein n=9 Tax=Bacillus cereus group
RepID=B7HEI9_BACC4
Length = 180
Score = 90.1 bits (222), Expect = 9e-17
Identities = 60/145 (41%), Positives = 80/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +L+RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[123][TOP]
>UniRef100_C2QJQ3 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Bacillus cereus R309803 RepID=C2QJQ3_BACCE
Length = 180
Score = 90.1 bits (222), Expect = 9e-17
Identities = 60/145 (41%), Positives = 80/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +L+RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[124][TOP]
>UniRef100_B6G8G1 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM
13279 RepID=B6G8G1_9ACTN
Length = 194
Score = 90.1 bits (222), Expect = 9e-17
Identities = 52/145 (35%), Positives = 79/145 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V V ++R EH Y +IDL + + R+LRK K + D+ + L +E
Sbjct: 56 VEVTVRARGSVIRVAEHGADMYAAIDLAADKVTRQLRKFKTRVVDNRQQ-----GLSAAE 110
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
V P D D + P+++D++ +VR K ++ P+T +A+ Q +++ HDFY F
Sbjct: 111 VAPVEPVADLADLL--IPEEEDDQ-----LVRVKEIELTPMTEEQALVQTDLLGHDFYVF 163
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N TG IN+VY RK GGYG+I PK
Sbjct: 164 ENSTTGLINVVYHRKNGGYGIIKPK 188
[125][TOP]
>UniRef100_UPI00006DCB57 hypothetical protein CdifQ_04002839 n=1 Tax=Clostridium difficile
QCD-32g58 RepID=UPI00006DCB57
Length = 138
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/141 (36%), Positives = 84/141 (59%)
Frame = -1
Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
V ++ + ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F +
Sbjct: 3 VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENL 59
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+ + E D+ + DDEE+ + R K F++ P++ EAI Q+E+V H+FY FR
Sbjct: 60 DF-IDNSSEFDDYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 114
Query: 91 NEETGEINIVYKRKEGGYGLI 29
N++ EINIVYKRK GGYGLI
Sbjct: 115 NQDNFEINIVYKRKAGGYGLI 135
[126][TOP]
>UniRef100_A0Q2Y0 Ribosomal subunit interface protein n=1 Tax=Clostridium novyi NT
RepID=A0Q2Y0_CLONN
Length = 178
Score = 89.7 bits (221), Expect = 1e-16
Identities = 50/145 (34%), Positives = 84/145 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +++RAE+ Y +ID+V ++R++RK K K + K + LKF
Sbjct: 50 VEVTIPFNGVILRAEDSNSDMYAAIDIVLEKLERQIRKQKTKL----QRRKHGDALKFQF 105
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ +P KDDE+ + ++V+TK F + P++ EA+ Q+E++ H+F+ F
Sbjct: 106 IPEYVP-------------KDDEDNIESKIVKTKRFAIKPMSREEAVLQMELLGHNFFVF 152
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N ET E+N++YKRK+G YGLI P+
Sbjct: 153 TNAETEEVNVLYKRKDGQYGLIEPE 177
[127][TOP]
>UniRef100_D0BMS6 Ribosomal subunit interface protein n=1 Tax=Granulicatella elegans
ATCC 700633 RepID=D0BMS6_9LACT
Length = 182
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/142 (37%), Positives = 82/142 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + +++RAEE + YGSIDLV ++R++RK K K R KG F
Sbjct: 54 VEVTIPLPYLVLRAEETSGDLYGSIDLVIDKLERQVRKYKTKINRKSRE-KG-----FDI 107
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ P + P+ DE+E + E+VRTK D+ P+ EA+ Q+ M+ H+F+ +
Sbjct: 108 PVAP-----------VVPEPVDEDESVLEIVRTKRVDLKPMDSEEAVLQMNMLGHNFFIY 156
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
++ ET E +IVY+RK+G YGLI
Sbjct: 157 QDAETNETHIVYRRKDGKYGLI 178
[128][TOP]
>UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile
RepID=C9XLM7_CLODI
Length = 187
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/141 (36%), Positives = 84/141 (59%)
Frame = -1
Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
V ++ + ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F +
Sbjct: 52 VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENL 108
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+ + E D+ + DDEE+ + R K F++ P++ EAI Q+E+V H+FY FR
Sbjct: 109 DF-IDNSSEFDDYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 163
Query: 91 NEETGEINIVYKRKEGGYGLI 29
N++ EINIVYKRK GGYGLI
Sbjct: 164 NQDNFEINIVYKRKAGGYGLI 184
[129][TOP]
>UniRef100_C4FCG3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis
DSM 13280 RepID=C4FCG3_9ACTN
Length = 194
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/145 (35%), Positives = 78/145 (53%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V V ++R EH Y +IDL + + R+LRK K + D+ + L +E
Sbjct: 56 VEVTVRARGSVIRVAEHGADMYAAIDLAAEKVTRQLRKFKTRVVDNRQQ-----GLSAAE 110
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
V P D D + P+ +D++ +VR K ++ P+T EA+ Q +++ HDFY F
Sbjct: 111 VAPVEPVADLADLL--LPEDEDDQ-----LVRVKEVELTPMTDEEALVQTDLIGHDFYVF 163
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N TG +N+VY RK GGYG+I PK
Sbjct: 164 ENSVTGLVNVVYHRKNGGYGIIKPK 188
[130][TOP]
>UniRef100_C3AT15 Ribosome-associated factor Y n=3 Tax=Bacillus RepID=C3AT15_BACMY
Length = 180
Score = 89.7 bits (221), Expect = 1e-16
Identities = 58/145 (40%), Positives = 80/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +L+RAEE Y +IDLV ++R++RK K K R P +
Sbjct: 50 VEVTIPFTDLLLRAEETHSDMYAAIDLVVDKVERQIRKHKTKVNRKLREKGSPK----TA 105
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
IL P+ E+ K+DE EL VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 106 FILTEPAATLEEV------KEDELEL----VRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[131][TOP]
>UniRef100_B7HX18 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
RepID=B7HX18_BACC7
Length = 180
Score = 89.7 bits (221), Expect = 1e-16
Identities = 59/145 (40%), Positives = 80/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +L+RAEE Y +IDLV ++R++RK K K R KG + F
Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDQLELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[132][TOP]
>UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
27758 RepID=C0BAM2_9FIRM
Length = 189
Score = 89.7 bits (221), Expect = 1e-16
Identities = 57/145 (39%), Positives = 80/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ ++R+E+ + Y SIDLV II+R+LRK K K +G + + E
Sbjct: 61 IEVTIPVKGNIIRSEQESSDMYVSIDLVEEIIERQLRKYKTKLI---AKQQGGHDFR-QE 116
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
I S E DEIEI VRTK F + P+ +A Q+E++ H+FY F
Sbjct: 117 FIESDTSAAESDEIEI--------------VRTKRFGIKPMFPEDACIQMELLGHNFYVF 162
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N ET E+N+VYKRK G YGLI P+
Sbjct: 163 SNAETDEVNVVYKRKNGTYGLIEPE 187
[133][TOP]
>UniRef100_Q72XS8 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
RepID=Q72XS8_BACC1
Length = 180
Score = 89.7 bits (221), Expect = 1e-16
Identities = 59/145 (40%), Positives = 80/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +L+RAEE Y +IDLV ++R++RK K K R KG + F
Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[134][TOP]
>UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
ATCC 43255 RepID=UPI00017F5ACC
Length = 185
Score = 89.4 bits (220), Expect = 2e-16
Identities = 53/141 (37%), Positives = 82/141 (58%)
Frame = -1
Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
V ++ + ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F
Sbjct: 52 VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFEN- 107
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
L D E + ++DE +IE R K F++ P++ EAI Q+E+V H+FY FR
Sbjct: 108 ---LDFIDNSSEFDDYDDEEDENIVIE---RRKKFNVKPMSSEEAILQMELVGHNFYMFR 161
Query: 91 NEETGEINIVYKRKEGGYGLI 29
N++ EINIVYKRK GGYGLI
Sbjct: 162 NQDNFEINIVYKRKAGGYGLI 182
[135][TOP]
>UniRef100_B8GDB0 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Chloroflexus aggregans DSM 9485 RepID=B8GDB0_CHLAD
Length = 197
Score = 89.4 bits (220), Expect = 2e-16
Identities = 46/137 (33%), Positives = 85/137 (62%), Gaps = 1/137 (0%)
Frame = -1
Query: 427 ILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK-GPNRLKFSEVILPLPSG 251
+++RAEE A Y +ID V ++QR++++ K+K R ++ N L +E +
Sbjct: 65 VILRAEERAADLYAAIDAVQEVLQRQIQRYKDKYWRRSRELRRATNGLTPAEEVA---IA 121
Query: 250 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 71
+ E E P E E + +V+RTK F + P+ V +AI+Q+E++ H F+ F++ ET +I
Sbjct: 122 EAETEAMTAPV---ETEPVAKVIRTKTFRLRPMFVDDAIEQMELLGHTFFVFQDAETMQI 178
Query: 70 NIVYKRKEGGYGLIIPK 20
+++Y+R++G YG+I+P+
Sbjct: 179 SVLYRRRDGNYGVIVPE 195
[136][TOP]
>UniRef100_C6Q3Y9 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermoanaerobacter mathranii subsp. mathranii str.
A3 RepID=C6Q3Y9_9THEO
Length = 181
Score = 89.4 bits (220), Expect = 2e-16
Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Frame = -1
Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVV--------VVVEVEKILVRAEEHAETTYG 386
T ++ VVK+V+ + + V ++ V + + + I+ RAEE ++ YG
Sbjct: 14 TDGLRDAVVKKVSKLSKYFTEDTEVRTVLSVQKNHHIAEITIPFKGIIFRAEEVSDDMYG 73
Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITP----Q 218
SID V I+R++ K K K NR +E I EI P
Sbjct: 74 SIDRVVDKIERQILKHKTKLK---------NRFGANESI----------RFEIPPVYQEA 114
Query: 217 KDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGY 38
K++EEE E+V+TK F + P++ EAI Q+ ++ H+F+ F N +T IN+VYKRK+G Y
Sbjct: 115 KEEEEETSFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKY 174
Query: 37 GLIIP 23
GLI P
Sbjct: 175 GLIEP 179
[137][TOP]
>UniRef100_C2EGB2 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
salivarius ATCC 11741 RepID=C2EGB2_9LACO
Length = 184
Score = 89.4 bits (220), Expect = 2e-16
Identities = 52/142 (36%), Positives = 82/142 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + +++RAEE + Y SIDLV+ ++R++RK K K R KG +F+
Sbjct: 54 VEVTIPLPYLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKNFEFA- 111
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
P DE++E+E + E+VRTK + P+ EA+ Q++M+ HDF+ +
Sbjct: 112 -----PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGHDFFIY 157
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
+ E G INIVY+R++G YGLI
Sbjct: 158 EDAENGGINIVYRRRDGRYGLI 179
[138][TOP]
>UniRef100_A3DJE4 Sigma 54 modulation protein / SSU ribosomal protein S30P n=3
Tax=Clostridium thermocellum RepID=A3DJE4_CLOTH
Length = 177
Score = 89.4 bits (220), Expect = 2e-16
Identities = 68/185 (36%), Positives = 100/185 (54%), Gaps = 11/185 (5%)
Frame = -1
Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVVV-----VVEV----EKILVRAEEHAETTY 389
T A+K VK+V + +K A +I + V +VEV E L+RAEE + Y
Sbjct: 13 TEALKEAAVKKVGKL-DKYFRRDAEATITMSVQKNRHIVEVTIPFEGGLLRAEEDSPDMY 71
Query: 388 GSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQK 215
SID V ++R++R+ K K + H ++ N +KF ++DE+E P+
Sbjct: 72 ASIDKVIDSLERQIRRNKTKLEKKVHDGSLRFEN-IKF-----------DDDEVEEEPKF 119
Query: 214 DDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYG 35
EVVRTK F + P+TV EAI Q+ ++ H F+ F N ET E N+VY+RK+G YG
Sbjct: 120 --------EVVRTKKFAIKPMTVEEAILQMNLLGHQFFMFSNAETNEANVVYRRKDGNYG 171
Query: 34 LIIPK 20
LI P+
Sbjct: 172 LIEPE 176
[139][TOP]
>UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
35704 RepID=B0NJJ3_EUBSP
Length = 179
Score = 89.4 bits (220), Expect = 2e-16
Identities = 50/145 (34%), Positives = 82/145 (56%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ ++R+E+ + Y SIDLV +I+R+LRK K K RH +G K
Sbjct: 50 IEVTIPVKGGIIRSEQESSDMYVSIDLVEEVIERQLRKYKNKLI--ARHQEGSGNFK--- 104
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
++ + + +D+ E+ ++VRTK F P+ +A Q+E++ HDF+ F
Sbjct: 105 ----------QEFFDSGERSEDDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFFVF 152
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N ET E+N+VY+RK G +GLI P+
Sbjct: 153 CNAETDEVNVVYRRKNGTFGLIEPE 177
[140][TOP]
>UniRef100_UPI0001789185 sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789185
Length = 188
Score = 89.0 bits (219), Expect = 2e-16
Identities = 54/142 (38%), Positives = 82/142 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + +++RAE+ ++ Y SID V ++R++RK K K R +K LK
Sbjct: 52 VEVTIPLTGVVLRAEDRSDDMYASIDAVVDKLERQIRKHKTKLN---RKIKQEGGLK--- 105
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
++ +++ + DE+E EVVRTK F M P+ V EAI Q+ MV H+F+ F
Sbjct: 106 TLIAENGAAATSQVDAEQVEYDEDEY--EVVRTKRFTMKPMDVEEAILQMNMVGHNFFVF 163
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
N +T E+N+VYKR +G YGLI
Sbjct: 164 SNIDTQEVNVVYKRDDGKYGLI 185
[141][TOP]
>UniRef100_Q9K6W6 Ribosomal protein S30AE family n=1 Tax=Bacillus halodurans
RepID=Q9K6W6_BACHD
Length = 187
Score = 89.0 bits (219), Expect = 2e-16
Identities = 52/145 (35%), Positives = 86/145 (59%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + + ++L+RAEE Y +IDLV ++R++RK K K R +G + F
Sbjct: 52 IEVTIPMSRLLLRAEEKHSDMYAAIDLVIEKLERQIRKHKTKVNRKFRQ-EGSLKYMFKN 110
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ P+ EE +E +E++L +VVR K F++ P+ EAI Q++M+ H+F+ F
Sbjct: 111 DLEPMDGMREEILLE------EEDDL--QVVRKKRFNLKPMDTEEAILQMDMLGHNFFVF 162
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +G+ N+VY+RK+G YGLI P+
Sbjct: 163 SNAISGDTNVVYRRKDGKYGLIEPE 187
[142][TOP]
>UniRef100_B7GL70 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Anoxybacillus
flavithermus WK1 RepID=B7GL70_ANOFW
Length = 182
Score = 88.6 bits (218), Expect = 3e-16
Identities = 57/142 (40%), Positives = 79/142 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + + +I++RAEE + Y +IDLV ++R++RK K K R K N + +
Sbjct: 53 IEVTIPMPQIVLRAEERHDDMYAAIDLVVDKLERQIRKHKTKVNRKMRE-KEANGVTLTA 111
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ P EE E EEE EVVRTK F + P+ EAI Q+ M+ H+FY F
Sbjct: 112 TV---PVATEEHE---------EEEF--EVVRTKRFSLKPMDSEEAILQMNMLGHNFYVF 157
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
N ET N+VYKRK+G YGLI
Sbjct: 158 INAETNRTNVVYKRKDGKYGLI 179
[143][TOP]
>UniRef100_C2LVK8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus hominis
SK119 RepID=C2LVK8_STAHO
Length = 191
Score = 88.6 bits (218), Expect = 3e-16
Identities = 47/142 (33%), Positives = 81/142 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + ++ + +RAEE + Y IDLV+S ++R++RK K + R P E
Sbjct: 54 IEVTIPLKNVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKNRDNGEP------E 107
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ +++E T + +E E+ E++R+K F + P+ EA+ Q++++ HDFY F
Sbjct: 108 PFIAEQQTVVNEDVEATSESSNENEI--EIIRSKQFSLKPMDSEEAVLQMDLLGHDFYIF 165
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
+ ET +IVY+RK+G YGLI
Sbjct: 166 TDRETDGTSIVYRRKDGKYGLI 187
[144][TOP]
>UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F60C6
Length = 185
Score = 88.2 bits (217), Expect = 4e-16
Identities = 53/141 (37%), Positives = 81/141 (57%)
Frame = -1
Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
V ++ + ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F V
Sbjct: 52 VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENV 108
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
S + +D DDEE + R K F++ P++ EAI Q+E+V H+FY FR
Sbjct: 109 DFIDNSSEFDDY-------DDEEYENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 161
Query: 91 NEETGEINIVYKRKEGGYGLI 29
N++ EINIVYKRK GGYGLI
Sbjct: 162 NQDNFEINIVYKRKAGGYGLI 182
[145][TOP]
>UniRef100_C5D7S1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. WCH70 RepID=C5D7S1_GEOSW
Length = 182
Score = 88.2 bits (217), Expect = 4e-16
Identities = 51/142 (35%), Positives = 83/142 (58%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + + ++L+RAEE + Y +IDLV+ ++R++RK K K +L+ E
Sbjct: 53 IEVTIPMPQLLLRAEERHDDMYAAIDLVADKLERQIRKHKTKVN---------RKLRNKE 103
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
L + + +E +++EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F
Sbjct: 104 TKQVLVTQNNNPPVE----ENEEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
N ET NIVY+RK+G YGLI
Sbjct: 158 TNAETNRTNIVYRRKDGKYGLI 179
[146][TOP]
>UniRef100_B2TK14 Ribosome-associated protein Y n=3 Tax=Clostridium botulinum
RepID=B2TK14_CLOBB
Length = 177
Score = 88.2 bits (217), Expect = 4e-16
Identities = 56/182 (30%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Frame = -1
Query: 541 TRAVKVVVVKEVAAV---VNKLVAEAAVESIP-----VVVVVEVEKILVRAEEHAETTYG 386
T A++ +V K+++ + N + A S+ V V++ +++R EE E Y
Sbjct: 13 TNALREMVEKKISKLGKYFNSDIEAKATLSVQRNRQIVEVMIPFNGVVLRGEEANEDMYR 72
Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206
+IDLV+ ++R++RK K K + K LKF E++ +++P DE
Sbjct: 73 AIDLVAEKLERQIRKQKTKLS-----RKKSGSLKFGEIV------------DLSPVAVDE 115
Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26
EE ++V+ K F + P+ + EAI Q+E+V H+F+ +++ ++ +IN++YKRK+G YGL+
Sbjct: 116 EEA--KLVKRKRFGVKPMDIDEAILQMELVGHNFFVYQDVDSNKINVIYKRKDGDYGLLD 173
Query: 25 PK 20
P+
Sbjct: 174 PE 175
[147][TOP]
>UniRef100_C3GRH2 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1 RepID=C3GRH2_BACTU
Length = 180
Score = 88.2 bits (217), Expect = 4e-16
Identities = 59/145 (40%), Positives = 79/145 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +L+RAEE Y +IDLV ++R++RK K K R KG + F
Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[148][TOP]
>UniRef100_A9VQA3 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Bacillus cereus group RepID=A9VQA3_BACWK
Length = 180
Score = 88.2 bits (217), Expect = 4e-16
Identities = 59/145 (40%), Positives = 78/145 (53%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + +L+RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 50 IEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[149][TOP]
>UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
RepID=B0P2P9_9CLOT
Length = 179
Score = 88.2 bits (217), Expect = 4e-16
Identities = 52/145 (35%), Positives = 83/145 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + ++ ++RAEE +E Y SIDLV +I+R++R+ K + + K+
Sbjct: 53 IEVTIPMKGHIIRAEEGSEDMYVSIDLVVDVIERQIRRYKTRLMNQ----------KYDG 102
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
++ED++E DDE +I R+K F + P+ V EA Q+E++ HDF+ F
Sbjct: 103 TSFKQEFMEQEDDVE-----DDEIRII----RSKKFAIKPMDVEEACVQMELLGHDFFVF 153
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
RN +T E+N+VYKRK YGLI P+
Sbjct: 154 RNADTFEVNVVYKRKGNTYGLIEPE 178
[150][TOP]
>UniRef100_A0RKX8 Sigma 54 modulation protein / SSU ribosomal protein S30P n=26
Tax=Bacillus cereus group RepID=A0RKX8_BACAH
Length = 180
Score = 88.2 bits (217), Expect = 4e-16
Identities = 59/145 (40%), Positives = 79/145 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +L+RAEE Y +IDLV ++R++RK K K R KG + F
Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[151][TOP]
>UniRef100_Q4L4H7 Uncharacterized protein SH2139 n=1 Tax=Staphylococcus haemolyticus
JCSC1435 RepID=Y2139_STAHJ
Length = 192
Score = 88.2 bits (217), Expect = 4e-16
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK-ETDHGRHMKGPNRLKFS 278
+ V + ++ + +RAEE + Y IDLV+S ++R++RK K + H H G +
Sbjct: 54 IEVTIPLKNVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKHKTH--GEPEAFVA 111
Query: 277 EVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98
EV P + D++ P D E E+I R+K F + P+ EA+ Q+E++ HDFY
Sbjct: 112 EVQEAPP--ENVDDVNAEPTNDSEIEII----RSKQFSLKPMDSEEAVLQMELLGHDFYI 165
Query: 97 FRNEETGEINIVYKRKEGGYGLI 29
F + ET +IVYKRK+G YGLI
Sbjct: 166 FTDRETDGTSIVYKRKDGKYGLI 188
[152][TOP]
>UniRef100_Q49VV1 Uncharacterized protein SSP1964 n=1 Tax=Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305
RepID=Y1964_STAS1
Length = 190
Score = 88.2 bits (217), Expect = 4e-16
Identities = 48/142 (33%), Positives = 86/142 (60%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + ++K+ +RAEE + Y IDL+++ ++R++RK K + R+ +G E
Sbjct: 54 IEVTIPLKKVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRVNRRNRN-RGEQ-----E 107
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
LP +E++ +EI +++ + IE ++R K F + P+ EA+ Q++++ HDF+ F
Sbjct: 108 AFASLP--EEKEAVEIQNDENEADNEIE-IIRAKNFSLKPMDSEEAVLQMDLLGHDFFIF 164
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
+ ET +IVYKRK+G YGLI
Sbjct: 165 TDRETDGTSIVYKRKDGKYGLI 186
[153][TOP]
>UniRef100_Q5WDF7 Ribosomal protein S30EA n=1 Tax=Bacillus clausii KSM-K16
RepID=Q5WDF7_BACSK
Length = 184
Score = 87.8 bits (216), Expect = 5e-16
Identities = 52/145 (35%), Positives = 85/145 (58%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + + K+L+R EE Y +ID+V ++R++RK K K R +G + F
Sbjct: 53 IEVTIPMPKLLLRGEEINADMYAAIDIVVEKLERQIRKYKTKVNRKFRQ-EGSLKYMFKN 111
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ PL DE+ +++EL EVVRTK F++ P+ EAI Q++++ H+F+ F
Sbjct: 112 ELEPL-----RDEVA------EDDEL--EVVRTKRFNLKPMDAEEAILQMDLLGHNFFVF 158
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
+ E+G N+VY+RK+G YGLI P+
Sbjct: 159 SDAESGSTNVVYRRKDGKYGLIEPE 183
[154][TOP]
>UniRef100_B9MLV8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Anaerocellum thermophilum DSM 6725
RepID=B9MLV8_ANATD
Length = 181
Score = 87.8 bits (216), Expect = 5e-16
Identities = 51/154 (33%), Positives = 88/154 (57%), Gaps = 3/154 (1%)
Frame = -1
Query: 472 AVESIPVVVVVEV--EKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 299
+VE I +V V + +++RAEE + Y +IDLV ++R++RK K K + +
Sbjct: 42 SVEKISHIVEVTIPFHGMILRAEERSNDMYSAIDLVVDTLERQIRKFKTKIAKRAKDAES 101
Query: 298 PNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLE 122
+ F E+E P+K+ +EE E + +TK F + P++V EAI Q+
Sbjct: 102 LRYMTF--------------ELE-EPEKEVQEENSEFRIAKTKRFPIKPMSVEEAILQMN 146
Query: 121 MVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
++ H+F+ F N++T ++N+VY+R +G YGLI P+
Sbjct: 147 LLGHNFFVFLNQDTDKVNVVYRRNDGAYGLIEPE 180
[155][TOP]
>UniRef100_C6QNN3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. Y4.1MC1 RepID=C6QNN3_9BACI
Length = 183
Score = 87.8 bits (216), Expect = 5e-16
Identities = 52/142 (36%), Positives = 84/142 (59%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + + ++L+RAEE + Y +IDLV+ ++R++RK K K + K +R K +
Sbjct: 53 IEVTIPMPQLLLRAEERHDDMYAAIDLVADKLERQIRKHKTKV-----NRKLRDRDKEVK 107
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ + + P +D+EEE E +VRTK+F + P+ EAI Q+ ++ H+F+ F
Sbjct: 108 QVATVQTN--------APAEDNEEEEFE-IVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 158
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
N ET NIVY+RK+G YGLI
Sbjct: 159 TNAETNRTNIVYRRKDGKYGLI 180
[156][TOP]
>UniRef100_C2YZ14 Ribosome-associated factor Y n=1 Tax=Bacillus cereus AH1271
RepID=C2YZ14_BACCE
Length = 180
Score = 87.8 bits (216), Expect = 5e-16
Identities = 59/145 (40%), Positives = 79/145 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +L+RAEE Y +IDLV ++R++RK K K R KG + F
Sbjct: 50 VEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[157][TOP]
>UniRef100_C2SSP0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus BDRD-ST196
RepID=C2SSP0_BACCE
Length = 180
Score = 87.8 bits (216), Expect = 5e-16
Identities = 59/145 (40%), Positives = 78/145 (53%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + +L+RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 50 IEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[158][TOP]
>UniRef100_C2Q3D0 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
RepID=C2Q3D0_BACCE
Length = 180
Score = 87.8 bits (216), Expect = 5e-16
Identities = 59/145 (40%), Positives = 78/145 (53%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + +L+RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 50 IEVTIPFTDLLLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[159][TOP]
>UniRef100_C0BYR7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
15053 RepID=C0BYR7_9CLOT
Length = 178
Score = 87.8 bits (216), Expect = 5e-16
Identities = 52/145 (35%), Positives = 82/145 (56%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ ++R+E+ + Y SIDLV +I+R+LRK K K RH +G N +
Sbjct: 50 IEVTIPVKGNIIRSEQVSSDMYVSIDLVEEVIERQLRKYKNKLV--ARHQEGGNFRQ--- 104
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
E E E + DDE + +VRTK F + P+ +A Q++++ HDF+ F
Sbjct: 105 ---------EFFESEYATEDDDEVK----IVRTKRFGIKPMYPEDACIQMDLLGHDFFVF 151
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E+N+VY+RK G +GLI P+
Sbjct: 152 CNADTDEVNVVYRRKNGTFGLIEPE 176
[160][TOP]
>UniRef100_B9CNR8 Light-repressed protein n=1 Tax=Atopobium rimae ATCC 49626
RepID=B9CNR8_9ACTN
Length = 195
Score = 87.8 bits (216), Expect = 5e-16
Identities = 51/150 (34%), Positives = 78/150 (52%)
Frame = -1
Query: 469 VESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 290
+E V V V V +VR + YG+ID + + R+LRK K + D H +
Sbjct: 52 LERKSVEVTVFVRNSVVRVVSSGDDMYGAIDEAAEKVTRQLRKYKTRIVDKHHHAQNTRG 111
Query: 289 LKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 110
S+ +E + TP +D +++L+ E KY D+ P+T EA+ Q +++ H
Sbjct: 112 RALSQ--------EELANLIETPAEDLDDQLVRE----KYIDLLPMTEEEALVQTDLLGH 159
Query: 109 DFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
DFY F N TG N++Y RK GGYG+I P+
Sbjct: 160 DFYVFVNSTTGLTNVIYHRKNGGYGIIKPR 189
[161][TOP]
>UniRef100_P28368 Uncharacterized protein yvyD n=1 Tax=Bacillus subtilis
RepID=YVYD_BACSU
Length = 189
Score = 87.8 bits (216), Expect = 5e-16
Identities = 53/144 (36%), Positives = 79/144 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + + +R+E H E Y +IDL ++ ++R++RK K K R P L
Sbjct: 53 VEVTIPMTDLALRSEVHNEDMYNAIDLATNKLERQIRKHKTKVNRKFREQGSPKYL---- 108
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
L +G D +I Q D EEE ++VR K F++ P+ EAI Q+ M+ H+F+ F
Sbjct: 109 ----LANGLGSDT-DIAVQDDIEEEESLDIVRQKRFNLKPMDSEEAILQMNMLGHNFFVF 163
Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23
N ET N+VY+R +G YGLI P
Sbjct: 164 TNAETNLTNVVYRRNDGKYGLIEP 187
[162][TOP]
>UniRef100_C4V4X1 Ribosome-associated inhibitor A n=1 Tax=Selenomonas flueggei ATCC
43531 RepID=C4V4X1_9FIRM
Length = 181
Score = 87.4 bits (215), Expect = 6e-16
Identities = 51/133 (38%), Positives = 73/133 (54%)
Frame = -1
Query: 427 ILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGD 248
IL+R EEH+E Y SIDLV ++R++RK K K R G
Sbjct: 61 ILLRGEEHSEDMYSSIDLVIEKLERQIRKQKTKLARRFRQ-----------------GGF 103
Query: 247 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 68
+ + +E Q EE+ + VV+TK F + P+ V EAI Q+ +++H F+ FRN E+ E+N
Sbjct: 104 KAEAVETFAQPIPEEDELYPVVKTKRFTLQPMDVQEAIMQMNLLNHHFFVFRNAESEEVN 163
Query: 67 IVYKRKEGGYGLI 29
IVY R +G Y LI
Sbjct: 164 IVYGRHDGKYALI 176
[163][TOP]
>UniRef100_C2ZFA1 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
RepID=C2ZFA1_BACCE
Length = 180
Score = 87.4 bits (215), Expect = 6e-16
Identities = 58/145 (40%), Positives = 79/145 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + +L+RAEE Y +IDLV ++R++RK K K R KG + F
Sbjct: 50 IEVTIPFTDLLLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF-- 106
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[164][TOP]
>UniRef100_B7DUH5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alicyclobacillus acidocaldarius LAA1
RepID=B7DUH5_9BACL
Length = 180
Score = 87.4 bits (215), Expect = 6e-16
Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 10/184 (5%)
Frame = -1
Query: 541 TRAVKVVVVKEVAAVVNKLVAEA--------AVESIP--VVVVVEVEKILVRAEEHAETT 392
T A++ V K++A + EA AVE + V + V V ++ RAEE +
Sbjct: 13 TAALQEYVDKKIARLTRYFDREADKQIYVTMAVEGLDHRVEMTVFVNGVIFRAEEKSPDM 72
Query: 391 YGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKD 212
Y SIDL + ++ ++ + KEK R +GP P + D + T D
Sbjct: 73 YASIDLATDKLEEQIHRYKEKLNRRFR-ARGPR---------PQLKAADRDAVAET---D 119
Query: 211 DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGL 32
DE + VVR K F + P+ V EA+ Q+E++ HDF+ F N ET E+N+VY+R+ G YGL
Sbjct: 120 DEIK----VVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRRRSGDYGL 175
Query: 31 IIPK 20
I P+
Sbjct: 176 IEPQ 179
[165][TOP]
>UniRef100_UPI0001694CB6 ribosomal subunit interface protein n=1 Tax=Paenibacillus larvae
subsp. larvae BRL-230010 RepID=UPI0001694CB6
Length = 182
Score = 87.0 bits (214), Expect = 8e-16
Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Frame = -1
Query: 541 TRAVKVVVVKEVAAVVN----KLVAEAAV------ESIPVVVVVEVEKILVRAEEHAETT 392
T A+K V K+++ + L +EA+V + V V + + L+RAE +
Sbjct: 13 TEALKDYVDKKISKLDKYFEAPLASEASVTLSVIKDMHTVEVTIPISGALLRAEVKNDDM 72
Query: 391 YGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKD 212
Y SIDLV ++R++RK K K R G L E PS
Sbjct: 73 YASIDLVVDKLERQIRKYKTKMNRRIRQEGGKRDLFVME-----PSS--------VANTV 119
Query: 211 DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGL 32
+EEE E+VRTK F + P+ V EAI Q+ MV H+F+ F N +T ++N+VYKR++G YGL
Sbjct: 120 EEEEY--ELVRTKRFTLKPMDVEEAILQMNMVGHNFFVFANMDTDQVNVVYKREDGRYGL 177
Query: 31 IIP 23
I P
Sbjct: 178 IEP 180
[166][TOP]
>UniRef100_A9W9Y4 Ribosomal subunit interface protein n=2 Tax=Chloroflexus
RepID=A9W9Y4_CHLAA
Length = 197
Score = 87.0 bits (214), Expect = 8e-16
Identities = 46/137 (33%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Frame = -1
Query: 427 ILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK-GPNRLKFSEVILPLPSG 251
+++RAEE A Y +ID V ++QR++ + K+K R + PN L +E +
Sbjct: 65 VILRAEERAPDLYAAIDEVQEVLQRQIARYKDKYWRRSREQRRAPNGLTPAEEVA---IA 121
Query: 250 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 71
+ E TP + E V+RTK F + P+ V +AI+Q+E++ H+F+ F++ ET ++
Sbjct: 122 EAEAAALATPTEVGSEA---RVIRTKTFRLRPMFVDDAIEQMELLGHNFFVFQDAETMQV 178
Query: 70 NIVYKRKEGGYGLIIPK 20
+++Y+R++G YG+IIP+
Sbjct: 179 SVLYRRRDGNYGVIIPE 195
[167][TOP]
>UniRef100_Q3DA79 Ribosomal subunit interface protein n=2 Tax=Streptococcus
agalactiae RepID=Q3DA79_STRAG
Length = 184
Score = 87.0 bits (214), Expect = 8e-16
Identities = 53/147 (36%), Positives = 83/147 (56%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + ++ I +RAE+ ++ YGSIDLV I+R++RK K K R ++ S+
Sbjct: 54 VEVTILIDSITLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQ 108
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
V E E P DEE + + +VRTK ++ P+ V EA+ Q+E++ HDF+ +
Sbjct: 109 VFTT--------EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIY 157
Query: 94 RNEETGEINIVYKRKEGGYGLIIPKGN 14
+ E N++YKR++G GLI KGN
Sbjct: 158 TDAEDNTTNVLYKREDGELGLIEAKGN 184
[168][TOP]
>UniRef100_Q3CZ63 Ribosomal subunit interface protein n=6 Tax=Streptococcus
agalactiae RepID=Q3CZ63_STRAG
Length = 184
Score = 87.0 bits (214), Expect = 8e-16
Identities = 53/147 (36%), Positives = 83/147 (56%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + ++ I +RAE+ ++ YGSIDLV I+R++RK K K R ++ S+
Sbjct: 54 VEVTILIDSITLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQ 108
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
V E E P DEE + + +VRTK ++ P+ V EA+ Q+E++ HDF+ +
Sbjct: 109 VFTT--------EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIY 157
Query: 94 RNEETGEINIVYKRKEGGYGLIIPKGN 14
+ E N++YKR++G GLI KGN
Sbjct: 158 TDAEDNTTNVLYKREDGELGLIEAKGN 184
[169][TOP]
>UniRef100_C8WT44 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446 RepID=C8WT44_ALIAC
Length = 180
Score = 87.0 bits (214), Expect = 8e-16
Identities = 63/184 (34%), Positives = 95/184 (51%), Gaps = 10/184 (5%)
Frame = -1
Query: 541 TRAVKVVVVKEVAAVVNKLVAEA--------AVESIP--VVVVVEVEKILVRAEEHAETT 392
T A++ V K++A + EA AVE + V + V V ++ RAEE +
Sbjct: 13 TAALQDYVDKKIARLTRYFDREADKQIYVTMAVEGLDHRVEMTVFVNGVIFRAEEKSPDM 72
Query: 391 YGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKD 212
Y SIDL + ++ ++ + KEK R +GP P + D + T D
Sbjct: 73 YASIDLATDKLEEQIHRYKEKLNRRFR-ARGPR---------PQLKAADRDAVAET---D 119
Query: 211 DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGL 32
DE + VVR K F + P+ V EA+ Q+E++ HDF+ F N ET E+N+VY+R+ G YGL
Sbjct: 120 DEIK----VVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRRRSGDYGL 175
Query: 31 IIPK 20
I P+
Sbjct: 176 IEPQ 179
[170][TOP]
>UniRef100_C6J2M0 Ribosomal subunit interface protein n=1 Tax=Paenibacillus sp. oral
taxon 786 str. D14 RepID=C6J2M0_9BACL
Length = 183
Score = 87.0 bits (214), Expect = 8e-16
Identities = 55/142 (38%), Positives = 78/142 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + +++RAE+ ++ Y SID V ++R++RK K K R N L +
Sbjct: 52 VEVTIPLTGVVLRAEDRSDDMYASIDAVVDKLERQIRKHKTKINRKLRQKGVKNSLFVED 111
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ DE EEEL EVVRTK F + P+ V EAI Q+ MV H+F+ F
Sbjct: 112 ATTGSVALDE-----------GEEEL--EVVRTKRFTLKPMDVEEAILQMNMVGHNFFVF 158
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
N +T E+N+VYKR +G YGLI
Sbjct: 159 SNIDTKEVNVVYKRNDGKYGLI 180
[171][TOP]
>UniRef100_C0FKQ0 Putative uncharacterized protein n=1 Tax=Clostridium sp. M62/1
RepID=C0FKQ0_9CLOT
Length = 175
Score = 87.0 bits (214), Expect = 8e-16
Identities = 59/145 (40%), Positives = 80/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ ++RAEE + Y SIDLV II+R+L+K K K D K + FSE
Sbjct: 50 IEVTIPVKGHIIRAEEQSTDMYVSIDLVEEIIERQLKKYKRKLID-----KKQAPVDFSE 104
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ + EE E D+E IE+V K F M P+ EA Q+E++ H FY F
Sbjct: 105 LFV-----QEESE-------PDDEIKIEKV---KKFAMKPMDPEEACVQMELLGHSFYVF 149
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N ET E+N+VYKRK YGLI P+
Sbjct: 150 LNAETEEVNVVYKRKGHTYGLIEPE 174
[172][TOP]
>UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
ATCC 43243 RepID=B7AN97_9BACE
Length = 179
Score = 87.0 bits (214), Expect = 8e-16
Identities = 52/157 (33%), Positives = 83/157 (52%)
Frame = -1
Query: 490 KLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 311
K+ E + V + V+ ++R+E+ + Y SIDLV +I+R+L+K K K D
Sbjct: 41 KVTLSVEKERQKIEVTIPVKGSIIRSEQVSNDMYVSIDLVEEVIERQLKKYKNKLID--- 97
Query: 310 HMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAID 131
K + F++ + D++ +++I +RTK FD+ P+ EA
Sbjct: 98 --KQQDAAAFAQEYIDKEYVDDDADVKI--------------IRTKRFDVKPMDPEEACV 141
Query: 130 QLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
Q+E++ H FY F N ET +IN+VYKRK YGLI P+
Sbjct: 142 QMELLGHSFYVFFNSETEQINVVYKRKGNTYGLIEPE 178
[173][TOP]
>UniRef100_B9I248 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I248_POPTR
Length = 115
Score = 87.0 bits (214), Expect = 8e-16
Identities = 52/105 (49%), Positives = 63/105 (60%), Gaps = 14/105 (13%)
Frame = -1
Query: 355 RKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE--EELI---- 194
RKLRKIK+KE+DHGRHMKG N+LK E P+ E D ++ +KDD+ +EL
Sbjct: 8 RKLRKIKDKESDHGRHMKGFNKLKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHL 64
Query: 193 --------EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 83
V TKYFDMPPLTV EAI +L VDH FY F + E
Sbjct: 65 VTIHSIISSNAVHTKYFDMPPLTVDEAIVRLGNVDHAFYGFGHAE 109
[174][TOP]
>UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens
ATCC 27750 RepID=C4Z2Z4_EUBE2
Length = 175
Score = 86.7 bits (213), Expect = 1e-15
Identities = 51/145 (35%), Positives = 81/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ ++R+E+ + Y SIDLV +I+R+L+K K K D K N F++
Sbjct: 50 IEVTIPVKGNIIRSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVD-----KQQNAAAFAQ 104
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
E + D++E+ +++RTK F + P+ EA Q+E++ H+FY F
Sbjct: 105 --------------EFVEKDYDDDEV--KIIRTKRFGIKPMDPEEACVQMELLGHNFYVF 148
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N ET E+N+VYKRK YGLI P+
Sbjct: 149 FNSETEEVNVVYKRKGNTYGLIEPE 173
[175][TOP]
>UniRef100_B8CYM6 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Halothermothrix orenii H 168 RepID=B8CYM6_HALOH
Length = 184
Score = 86.7 bits (213), Expect = 1e-15
Identities = 49/144 (34%), Positives = 79/144 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +++R EE ++ Y SID V ++R++ K K K R K + ++ E
Sbjct: 51 VEVTAYLNGLILRGEEESQDMYASIDGVLEKLERQVHKYKTKINRKIRERKQEFKKEYKE 110
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ +EI +E+E +VRTK F + P++V EA Q++++ HDF+ F
Sbjct: 111 --------ERREEI----LNSEEDEFKPRIVRTKKFAIKPMSVEEAAMQMDLLGHDFFVF 158
Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23
N T ++N+VYKRK+G YGLI P
Sbjct: 159 TNANTEQVNVVYKRKDGNYGLIEP 182
[176][TOP]
>UniRef100_C5RGA6 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium cellulovorans 743B RepID=C5RGA6_CLOCL
Length = 180
Score = 86.7 bits (213), Expect = 1e-15
Identities = 49/145 (33%), Positives = 87/145 (60%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + ++ +++R EE E+ Y SIDLV ++ ++RK K K + K + L+F +
Sbjct: 50 IEVTIPLKNVILRGEEATESMYASIDLVIDKLEGQMRKNKTKLSKQ----KYADSLRFYD 105
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ + E+ T + EEE ++V+TK F + P+ EA+ Q+E++ H+F+ F
Sbjct: 106 AL-------SKGELAAT---EVEEE--SKIVKTKRFAIKPMNAEEAVLQMELLGHNFFVF 153
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
++ET E+N+VYKRK+G +GLI P+
Sbjct: 154 MDDETSEVNVVYKRKDGNFGLIEPE 178
[177][TOP]
>UniRef100_C2WEE0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus Rock3-44
RepID=C2WEE0_BACCE
Length = 180
Score = 86.7 bits (213), Expect = 1e-15
Identities = 57/145 (39%), Positives = 80/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +L+RAEE Y +IDLV I+R++RK K K R P +
Sbjct: 50 VEVTIPFTDLLLRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLREKGSPK----TT 105
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
IL E T ++ E++L E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 106 FILT--------ESAATLEEVKEDDL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E N+VY RK+G YGLI K
Sbjct: 156 TNADTNETNVVYGRKDGKYGLIETK 180
[178][TOP]
>UniRef100_B1B8N8 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum C
str. Eklund RepID=B1B8N8_CLOBO
Length = 184
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/145 (33%), Positives = 84/145 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +++RAE+ Y +ID+V ++R++RK K K + K + LKF
Sbjct: 56 VEVTIPFNGVILRAEDSNSDMYAAIDIVLEKLERQIRKQKTKL----QRRKHGDALKFQF 111
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ +P KD+E+ + ++V+TK F + P++ EA+ Q+E++ H+F+ F
Sbjct: 112 IPEYVP-------------KDNEDSIESKIVKTKRFAIKPMSKEEAVLQMELLGHNFFVF 158
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N +T E+N++YKRK+G YGLI P+
Sbjct: 159 TNGDTEEVNVLYKRKDGQYGLIEPE 183
[179][TOP]
>UniRef100_A8W0Z3 Maf protein n=1 Tax=Bacillus selenitireducens MLS10
RepID=A8W0Z3_9BACI
Length = 197
Score = 86.7 bits (213), Expect = 1e-15
Identities = 52/145 (35%), Positives = 82/145 (56%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V + + + K+L+RAEE Y ++DLV ++R++RK K K R +G + LK+
Sbjct: 66 VEITIPMPKLLLRAEEKHADMYAAVDLVIEKLERQIRKHKTKVN---RKFRGEDSLKYMF 122
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
P +EE TP D E+VRTK FD+ P+ EAI Q++M+ H+F+ F
Sbjct: 123 KNELEPISEEE-----TPDDD------YEIVRTKRFDLKPMDAEEAILQMDMLGHNFFVF 171
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
+ +G ++VY+R +G YGLI P+
Sbjct: 172 SDAVSGVTSVVYRRSDGKYGLIEPE 196
[180][TOP]
>UniRef100_Q898W3 SSU ribosomal protein S30P n=1 Tax=Clostridium tetani
RepID=Q898W3_CLOTE
Length = 176
Score = 86.3 bits (212), Expect = 1e-15
Identities = 53/145 (36%), Positives = 84/145 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + +++R EE E Y SIDLV ++R++RK K K + M G + L+F
Sbjct: 50 IEVTIPFNGVILRGEEANEDMYASIDLVIDKLERQIRKQKTKLQ---KRMHGDS-LRFQ- 104
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+P GD K EE ++V+TK F + P++ EA+ Q+E++ H+F+ F
Sbjct: 105 -FIPDYEGD----------KFKEES---KIVKTKRFAIKPMSSEEAVLQMELIGHNFFVF 150
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
+ +TGE+N+VYKRK+G YGLI P+
Sbjct: 151 ESADTGEVNVVYKRKDGNYGLIEPE 175
[181][TOP]
>UniRef100_Q1WSW6 Ribosome-associated factor Y n=1 Tax=Lactobacillus salivarius
UCC118 RepID=Q1WSW6_LACS1
Length = 184
Score = 86.3 bits (212), Expect = 1e-15
Identities = 51/142 (35%), Positives = 81/142 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + +++RAEE + Y SIDLV+ ++R++RK K K R KG +F+
Sbjct: 54 VEVTIPLPYLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKNFEFA- 111
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
P DE++E+E + E+VRTK + P+ EA+ Q++M+ HDF+ +
Sbjct: 112 -----PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGHDFFIY 157
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
+ E G I IVY+R++G YGLI
Sbjct: 158 EDAENGGIYIVYRRRDGRYGLI 179
[182][TOP]
>UniRef100_C2C307 Ribosome-associated inhibitor protein Y n=1 Tax=Listeria grayi DSM
20601 RepID=C2C307_LISGR
Length = 189
Score = 86.3 bits (212), Expect = 1e-15
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Frame = -1
Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR- 290
+S V V + + +++RAEE Y S+DL++ ++R++RK K K R KG +
Sbjct: 50 KSAKVEVTIPLPNLVLRAEETNGDLYASVDLIADKLERQIRKHKTKVNRKFRD-KGSEKD 108
Query: 289 -LKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVD 113
FSE+ PS + + + +I E+VRTK F + P+ EA+ Q+ ++
Sbjct: 109 YFAFSEINDSTPSEETDSDYDI------------EIVRTKSFSLKPMDSEEAVLQMNLLG 156
Query: 112 HDFYAFRNEETGEINIVYKRKEGGYGLI 29
H+F+ F + ET NIVYKRK+G YGLI
Sbjct: 157 HNFFVFNDAETNGTNIVYKRKDGKYGLI 184
[183][TOP]
>UniRef100_C0CJV5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
DSM 10507 RepID=C0CJV5_9FIRM
Length = 175
Score = 86.3 bits (212), Expect = 1e-15
Identities = 49/145 (33%), Positives = 82/145 (56%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ ++R+E+ + Y SIDLV +I+R+LRK K K D +
Sbjct: 50 IEVTIPVKGNIIRSEQVSNDMYVSIDLVEEVIERQLRKYKTKIVDKEK------------ 97
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+GD + I + ++E+E+ ++ RTK FD+ P+ +A Q+E++ H+F+ F
Sbjct: 98 ------AGDHFQKAFIEKEYEEEDEV--KIQRTKKFDIKPMYPEDACVQMELLGHNFFVF 149
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N ET ++N+VYKRK YGLI P+
Sbjct: 150 CNAETDQVNVVYKRKGNTYGLIEPE 174
[184][TOP]
>UniRef100_B9EAE7 Ribosomal subunit interface protein homolog n=1 Tax=Macrococcus
caseolyticus JCSC5402 RepID=B9EAE7_MACCJ
Length = 186
Score = 85.9 bits (211), Expect = 2e-15
Identities = 52/144 (36%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + ++ + +RAEE Y +++L+ ++R++RK K K NR KF E
Sbjct: 54 VEVTIPLKDVTLRAEERHNDLYAAVNLIVEKLERQIRKHKTKV----------NR-KFRE 102
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEV--VRTKYFDMPPLTVFEAIDQLEMVDHDFY 101
G + D + P + EEE +E+ +R+K F + P+ EA+ Q+ M+ HDF+
Sbjct: 103 ------KGVKNDIFPVLPGTEPEEEKGDEIEIIRSKQFALKPMDAEEAVLQMNMLGHDFF 156
Query: 100 AFRNEETGEINIVYKRKEGGYGLI 29
F + ET E NIVYKRK+G YGLI
Sbjct: 157 IFNDRETNETNIVYKRKDGKYGLI 180
[185][TOP]
>UniRef100_A4XJ41 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Caldicellulosiruptor saccharolyticus DSM 8903
RepID=A4XJ41_CALS8
Length = 182
Score = 85.9 bits (211), Expect = 2e-15
Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 2/153 (1%)
Frame = -1
Query: 472 AVESIPVVVVVEVE--KILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 299
+VE I +V V + +++RAEE + Y +IDLV ++R++RK K K + +
Sbjct: 43 SVEKIRHIVEVTIPFYGMILRAEEASNDMYSAIDLVVDSLERQIRKFKTKIAKRAKDAES 102
Query: 298 PNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 119
+ F E E + + EE ++ +TK F + P++V EAI Q+ +
Sbjct: 103 LRYMTFEE--------------EAQQETNQEENGEFKIAKTKRFPIKPMSVDEAILQMNL 148
Query: 118 VDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
+ H F+ F N++T ++N+VYKR +G YGLI P+
Sbjct: 149 LGHSFFVFLNQDTDKVNVVYKRNDGAYGLIEPE 181
[186][TOP]
>UniRef100_C1P990 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Bacillus coagulans 36D1 RepID=C1P990_BACCO
Length = 187
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/145 (34%), Positives = 88/145 (60%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V + + + ++++RAEE E Y +IDL++ ++R++RK K K R KG R E
Sbjct: 54 VEITIPMPQVVLRAEETNEDMYAAIDLIADKLERQIRKHKTKVNRKLRE-KGSTR----E 108
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ +G +E + +K+++ EL ++VRTK+F++ P+ EA+ Q+ ++ H+F+ +
Sbjct: 109 LFTTPDTGLKEKQA----RKEEDSEL--QIVRTKHFNLKPMDSEEAVLQMNLLGHNFFIY 162
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
+ ET NIVY+RK+G YGLI K
Sbjct: 163 TDAETNHTNIVYRRKDGKYGLIETK 187
[187][TOP]
>UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
29176 RepID=B5CNW3_9FIRM
Length = 186
Score = 85.9 bits (211), Expect = 2e-15
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK----ETDHGRHMKGPNRL 287
+ V + V+ ++R+E+ ++ Y SIDLV +I+R+LRK K K H
Sbjct: 50 IEVTIPVKGNIIRSEQTSDNMYVSIDLVEEVIERQLRKYKNKLVARSQGHPTSYTSTGNS 109
Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107
E E+DEI+I VRTK F + P+ +A Q+E++ H
Sbjct: 110 FRKEFFETEDDAAEDDEIQI--------------VRTKKFGIKPMFPEDACIQMELLGHS 155
Query: 106 FYAFRNEETGEINIVYKRKEGGYGLIIPK 20
F+ F N ET E+N+VYKRK+G +GLI P+
Sbjct: 156 FFVFSNAETDEVNVVYKRKDGSFGLIEPE 184
[188][TOP]
>UniRef100_A4ECY7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
ATCC 25986 RepID=A4ECY7_9ACTN
Length = 194
Score = 85.9 bits (211), Expect = 2e-15
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 22/192 (11%)
Frame = -1
Query: 529 KVVVVKEVAAVVNKLVAEAA----VESIPVVVVVEVEK------------------ILVR 416
K V + A V++ + EA +E + V VV+ EK ++R
Sbjct: 9 KTTVTDALRAHVDEKIGEALKVFDIEPMTVDVVLRYEKNPSNPNPAIVEVTARARGSVIR 68
Query: 415 AEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDE 236
EH Y +IDL + + R+LRK K K D NR + P ED
Sbjct: 69 VAEHGADMYAAIDLSADKVTRQLRKFKTKVVD--------NRQGGASAADVAPVERVEDL 120
Query: 235 IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYK 56
++ ++D++ L+ E K D+ P+T +A+ Q +++ HDFY F N TG IN+VY
Sbjct: 121 ADLLLPEEDDDLLVRE----KVIDVTPMTEEQALVQTDLLGHDFYVFENATTGLINVVYH 176
Query: 55 RKEGGYGLIIPK 20
RK GGYG+I P+
Sbjct: 177 RKNGGYGIIKPR 188
[189][TOP]
>UniRef100_C8WMZ8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Eggerthella lenta DSM 2243 RepID=C8WMZ8_9ACTN
Length = 191
Score = 85.5 bits (210), Expect = 2e-15
Identities = 52/171 (30%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Frame = -1
Query: 535 AVKVVVVKEVAAVVNKLVAEAAVESIPVV--VVVEVEKILVRAEEHAETTYGSIDLVSSI 362
++KV+ + + A + V + P V V + + ++R EEH E Y +ID+ ++
Sbjct: 27 SMKVMDIDPLVAEIVLFVEKNPANPRPAVCEVTLRTKGHIIRVEEHEEDMYAAIDVAAAK 86
Query: 361 IQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVV 182
+ R+LRK K K D R ++ + E I PS E +++ Q+ ++E VV
Sbjct: 87 VVRQLRKYKTKVVD--RKLRAAD-----ETIRIEPSAAGELDVDGLMQELSDDE----VV 135
Query: 181 RTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
R K + PLT EA+ +++++ HDF+A+ + ++G +N++Y+R +GGYGL+
Sbjct: 136 RVKTIEFEPLTEEEALVKIDLLGHDFFAYTDRDSGLVNVLYRRDDGGYGLL 186
[190][TOP]
>UniRef100_C6LIX7 Ribosomal subunit interface protein n=1 Tax=Bryantella
formatexigens DSM 14469 RepID=C6LIX7_9FIRM
Length = 176
Score = 85.5 bits (210), Expect = 2e-15
Identities = 53/146 (36%), Positives = 85/146 (58%), Gaps = 1/146 (0%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN-RLKFS 278
+ V + V+ ++R+E+ + Y SIDLV +I+R+LRK K K +H +G N R +F
Sbjct: 50 IEVTIPVKGNIIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKLI--AKHQEGSNFRREFI 107
Query: 277 EVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98
E +E+ +E EE+ ++RTK+F + P+ +A Q+E++ H+F+
Sbjct: 108 E---------KEETVE-------PEEV--NIIRTKHFGIKPMYPEDACIQMELLGHNFFV 149
Query: 97 FRNEETGEINIVYKRKEGGYGLIIPK 20
F N ET E+N+VYKRK YGLI P+
Sbjct: 150 FCNAETEEVNVVYKRKGNTYGLIEPE 175
[191][TOP]
>UniRef100_C8P6S3 Ribosomal subunit interface protein n=1 Tax=Lactobacillus antri DSM
16041 RepID=C8P6S3_9LACO
Length = 179
Score = 85.1 bits (209), Expect = 3e-15
Identities = 50/142 (35%), Positives = 80/142 (56%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + + +RAEE + YGS+DLV+ ++R++RK K K R KG L+F
Sbjct: 54 VEVTIPLPYLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF-- 110
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+PS D+ E+ ++VRTK + P+ EA+ Q++M+ HDF+ F
Sbjct: 111 ----VPSDDDAASDEL------------KIVRTKQVSLKPMDPEEAVLQMDMLGHDFFVF 154
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
++ ET +IVY+R++G YGLI
Sbjct: 155 QDAETNGTSIVYRRRDGRYGLI 176
[192][TOP]
>UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6FVY1_9CLOT
Length = 194
Score = 85.1 bits (209), Expect = 3e-15
Identities = 52/132 (39%), Positives = 77/132 (58%)
Frame = -1
Query: 424 LVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDE 245
++RAEE E Y +IDLV ++ +L+K K+K RH + + + S +
Sbjct: 69 VIRAEESQENLYPAIDLVVDKLKIQLKKYKDKMQK--RHQENKS--------IRFDSPEI 118
Query: 244 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 65
D I +D E+EL + R K ++ P++ EA+ Q+E+V HDFY FRN+ET EI +
Sbjct: 119 NDSILEEDLEDFEDELFI-IKRRKRINIKPMSEEEAVLQMELVGHDFYIFRNDETDEIAL 177
Query: 64 VYKRKEGGYGLI 29
VYKRK GGYG+I
Sbjct: 178 VYKRKNGGYGII 189
[193][TOP]
>UniRef100_A1HT12 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT12_9FIRM
Length = 174
Score = 85.1 bits (209), Expect = 3e-15
Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 8/182 (4%)
Frame = -1
Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVV--------VVVEVEKILVRAEEHAETTYG 386
T A+K V K V + A + I V V V V +L+R EE Y
Sbjct: 13 TPALKDYVAKRVGKITKYFDALGEITVILTVEKGRHIVEVTVPVNGMLLRGEEATTDMYA 72
Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206
SIDLV +++++ K K K R ++ F ++ G+ ED
Sbjct: 73 SIDLVIEKLEKQIEKYKTKIA---RKLRAGT---FKTDLVAGNGGESEDF---------- 116
Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26
VV+TK F + P+ V EAI Q+ +++HDFY F N ET ++N++Y+RK+G YGLI
Sbjct: 117 -----RVVKTKRFPVKPMDVEEAIMQMNLINHDFYVFMNAETEQVNVIYRRKDGNYGLIE 171
Query: 25 PK 20
P+
Sbjct: 172 PE 173
[194][TOP]
>UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas
reinhardtii RepID=A8J8B2_CHLRE
Length = 286
Score = 85.1 bits (209), Expect = 3e-15
Identities = 60/163 (36%), Positives = 83/163 (50%), Gaps = 19/163 (11%)
Frame = -1
Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
V + + +VR E+ Y +IDLV I+ KL+KIKEK G P R E
Sbjct: 130 VTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQKIKEKAISRGAW---PGRAGPKED 186
Query: 271 ILPLPSGDEED------EIEITPQKDDEEELIEE------------VVRTKYFDMP-PLT 149
+ DEED E+++ Q D+EE ++ V+R+K + P+T
Sbjct: 187 V------DEEDFQEYLKEVKMDTQLFDKEEQLQRQFAELNRIYPANVMRSKTVVLADPIT 240
Query: 148 VFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPK 20
V EAID LE V H FY FR T + IVYKR+ GGYG+I+P+
Sbjct: 241 VEEAIDALEAVGHSFYVFREMTTDTVQIVYKRESGGYGVIVPQ 283
[195][TOP]
>UniRef100_Q3AFQ6 Ribosomal subunit interface protein n=1 Tax=Carboxydothermus
hydrogenoformans Z-2901 RepID=Q3AFQ6_CARHZ
Length = 177
Score = 84.7 bits (208), Expect = 4e-15
Identities = 51/143 (35%), Positives = 80/143 (55%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V + V L+R EE + Y SIDLV ++R+ +K KEK ++ K
Sbjct: 52 VTIPVAGYLLRGEEESPDMYSSIDLVVDKLERQAKKYKEKLYARFKNNKN---------- 101
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
+ +G E E TP+ D+E + +V++K F + P++ EA Q+E++ H F+ F N
Sbjct: 102 --IATG--EKSAETTPEPDNEIK----IVKSKRFAIKPMSPEEAAMQMELLGHSFFVFTN 153
Query: 88 EETGEINIVYKRKEGGYGLIIPK 20
+T EIN+VYKR++G YGLI P+
Sbjct: 154 ADTDEINVVYKRRDGKYGLIEPE 176
[196][TOP]
>UniRef100_A0ALJ5 YfiA protein n=2 Tax=Listeria RepID=A0ALJ5_LISW6
Length = 187
Score = 84.7 bits (208), Expect = 4e-15
Identities = 51/142 (35%), Positives = 77/142 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + +++RAEE + Y SIDL+ ++R++RK K K R KG R F+
Sbjct: 54 VEVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRD-KGAERDYFAY 112
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
D TP +++E + E+VRTK F + P+ EA+ Q+ ++ H FY +
Sbjct: 113 ----------SDVNGSTPPEENESDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVY 162
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
+ ET NIVY RK+G YGLI
Sbjct: 163 TDAETNGTNIVYSRKDGKYGLI 184
[197][TOP]
>UniRef100_C6VLR5 Ribosomal protein S30EA n=3 Tax=Lactobacillus plantarum
RepID=C6VLR5_LACPJ
Length = 188
Score = 84.7 bits (208), Expect = 4e-15
Identities = 51/142 (35%), Positives = 79/142 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + +++RAEE + Y S+DLV+ ++R++RK K K R KG + F+
Sbjct: 54 VEVTIPLPYLVLRAEETSPDMYASVDLVTDKLERQIRKYKTKVNRKSRE-KGYKAIDFAA 112
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
DE D +++L +VVRTK + P+ EAI Q++M+ HDF+ +
Sbjct: 113 T----------DETVAAADNDQDDKL--DVVRTKRVALKPMDNEEAILQMDMLGHDFFIY 160
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
+ ET INIVY+R +G YGLI
Sbjct: 161 EDAETDAINIVYRRNDGRYGLI 182
[198][TOP]
>UniRef100_A8FHW6 Ribosome-associated inhibitor A n=2 Tax=Bacillus pumilus
RepID=A8FHW6_BACP2
Length = 187
Score = 84.7 bits (208), Expect = 4e-15
Identities = 50/144 (34%), Positives = 76/144 (52%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + + +RAE H E Y ++DL +S ++R++RK K K R L
Sbjct: 53 VEVTIPMTDLALRAEVHNEDMYNAVDLAASKLERQIRKHKTKVNRKFREQGAKKHL---- 108
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
G+ ++ + +DDEE E+VR K F++ P+ EAI Q+ M+ H F+ F
Sbjct: 109 ----FAGGNGTADVAV---QDDEEIDETEIVRQKRFNLKPMDSEEAILQMNMLGHSFFVF 161
Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23
N ET N+VY+R +G YGLI P
Sbjct: 162 TNAETNLTNVVYRRNDGKYGLIEP 185
[199][TOP]
>UniRef100_A8U6N5 Ribosomal subunit interface protein n=1 Tax=Carnobacterium sp. AT7
RepID=A8U6N5_9LACT
Length = 180
Score = 84.7 bits (208), Expect = 4e-15
Identities = 56/163 (34%), Positives = 92/163 (56%)
Frame = -1
Query: 517 VKEVAAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKI 338
V E A VN + + ++ V V + + +++RAEE + YGS+DLVS ++R++RK
Sbjct: 35 VPEATAHVN--LKTYSDKTAKVEVTIPLPYLVLRAEETSPDLYGSVDLVSDKLERQMRKY 92
Query: 337 KEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMP 158
K K R +G N V+ P+ G+E Q+ E+E+ +VRTK +
Sbjct: 93 KTKIN---RRTRGSN-----VVVPPVLPGEE--------QESHEDEV--NIVRTKRLSLK 134
Query: 157 PLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
P+ EA+ Q++M+ H+F+ F + +T +IVY+RK+G YGLI
Sbjct: 135 PMDSEEAVLQMDMLGHNFFIFEDADTNGTSIVYRRKDGKYGLI 177
[200][TOP]
>UniRef100_A5Z528 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
ATCC 27560 RepID=A5Z528_9FIRM
Length = 179
Score = 84.7 bits (208), Expect = 4e-15
Identities = 53/145 (36%), Positives = 83/145 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + V+ ++RAEE ++ Y SID+V I+R+L K K K D + +K F+E
Sbjct: 50 VEVTIPVKGRIIRAEEISDDMYVSIDMVEETIERQLVKYKNKIIDKKKSIKEA----FTE 105
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ D EDE DE+++ ++ +TK F + P+ EA ++E++ H+F+ F
Sbjct: 106 TYI---EADYEDE--------DEDQI--KIKKTKRFGIKPMDPEEACVEMELLGHNFFVF 152
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N ET E+N+VYKRK YGLI P+
Sbjct: 153 LNAETEEVNVVYKRKGNTYGLIEPE 177
[201][TOP]
>UniRef100_A9AY42 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Herpetosiphon aurantiacus ATCC 23779
RepID=A9AY42_HERA2
Length = 186
Score = 84.3 bits (207), Expect = 5e-15
Identities = 47/137 (34%), Positives = 78/137 (56%), Gaps = 1/137 (0%)
Frame = -1
Query: 427 ILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-PLPSG 251
I++RAEE Y +++ V +QR++R+ KEK + +G R E+I PLP+
Sbjct: 65 IILRAEERDRELYAAVEAVHDNLQRQIRRFKEKH-----YRRGKLRRTAGEIIAAPLPAL 119
Query: 250 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 71
E D E+ +++R K + P+ EAI+Q+E++ H F+ FR+ ET +I
Sbjct: 120 PE----------DAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFVFRDAETEKI 169
Query: 70 NIVYKRKEGGYGLIIPK 20
+VY+R +G YGLI+P+
Sbjct: 170 QVVYRRNDGNYGLIMPR 186
[202][TOP]
>UniRef100_C2HJY8 Ribosome-associated inhibitor A n=1 Tax=Finegoldia magna ATCC 53516
RepID=C2HJY8_PEPMA
Length = 179
Score = 84.3 bits (207), Expect = 5e-15
Identities = 52/164 (31%), Positives = 86/164 (52%)
Frame = -1
Query: 514 KEVAAVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIK 335
++ V K +A VE V ++ + +++RAEE E +ID V + R++RK K
Sbjct: 35 QQARVVFKKEKDKARVE----VTMILDKGVVLRAEESNEDIKTAIDKVEDALARQIRKHK 90
Query: 334 EKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPP 155
K + N ++F E + +D+E I +V+TK F + P
Sbjct: 91 TKLQ---KRFTESNSIRF----------------EAVEENNDKEIPIGAIVKTKEFGIKP 131
Query: 154 LTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23
+ EAI Q+E++DHDF+ F + +T +N+VYKRK+G YGL++P
Sbjct: 132 MDKEEAIMQMELIDHDFFVFLDSKTNNVNVVYKRKDGNYGLLVP 175
[203][TOP]
>UniRef100_C2ETD9 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
vaginalis ATCC 49540 RepID=C2ETD9_9LACO
Length = 189
Score = 84.3 bits (207), Expect = 5e-15
Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + + +RAEE + YGS+DLV+ ++R++RK K K R KG L+F
Sbjct: 63 VEVTIPLPYLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGFKSLEF-- 119
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98
P DD E + ++VRTK + P+ EA+ Q++M+ HDF+
Sbjct: 120 ----------------VPTDDDAESQDDLKIVRTKQISLKPMDPEEAVLQMDMLGHDFFV 163
Query: 97 FRNEETGEINIVYKRKEGGYGLI 29
F++ ET +IVY+RK+G YGLI
Sbjct: 164 FQDAETDGTSIVYRRKDGRYGLI 186
[204][TOP]
>UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F5F53
Length = 183
Score = 84.0 bits (206), Expect = 7e-15
Identities = 47/141 (33%), Positives = 83/141 (58%)
Frame = -1
Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
V + V ++RAE+ E Y +ID+V + ++L+K K++ D + K ++F +
Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDA 108
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+ L DE+++ D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+
Sbjct: 109 EINL--ADEQEDYG-----DENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159
Query: 91 NEETGEINIVYKRKEGGYGLI 29
N ++ EI +VYKR GGYG+I
Sbjct: 160 NIDSDEIAVVYKRNNGGYGII 180
[205][TOP]
>UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile
RepID=C9XIR4_CLODI
Length = 183
Score = 84.0 bits (206), Expect = 7e-15
Identities = 49/141 (34%), Positives = 83/141 (58%)
Frame = -1
Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
V + V ++RAE+ E Y +ID+V + ++L+K K++ D + K R + SE+
Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKSI-RFQDSEI 110
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
L DE+++ D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+
Sbjct: 111 NL----ADEQEDYG-----DENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159
Query: 91 NEETGEINIVYKRKEGGYGLI 29
N ++ EI +VYKR GGYG+I
Sbjct: 160 NIDSDEIAVVYKRNNGGYGII 180
[206][TOP]
>UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630
RepID=Q18CN1_CLOD6
Length = 183
Score = 84.0 bits (206), Expect = 7e-15
Identities = 47/141 (33%), Positives = 83/141 (58%)
Frame = -1
Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
V + V ++RAE+ E Y +ID+V + ++L+K K++ D + K ++F +
Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDA 108
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
+ L DE+++ D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+
Sbjct: 109 EINL--ADEQEDYG-----DENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159
Query: 91 NEETGEINIVYKRKEGGYGLI 29
N ++ EI +VYKR GGYG+I
Sbjct: 160 NIDSDEIAVVYKRNNGGYGII 180
[207][TOP]
>UniRef100_A5CYJ2 Ribosome-associated protein Y n=1 Tax=Pelotomaculum
thermopropionicum SI RepID=A5CYJ2_PELTS
Length = 175
Score = 84.0 bits (206), Expect = 7e-15
Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Frame = -1
Query: 541 TRAVKVVVVKEVAAVVNKL--VAEAAV------ESIPVVVVVEVEKILVRAEEHAETTYG 386
T A+K VVK V + + +A V ES V V + V +++R EE Y
Sbjct: 13 TDALKDYVVKRVGKLDKYIDNFGDAQVTLAVEKESHRVEVTIPVNGMILRGEESTGDMYT 72
Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206
SIDLV +++++ K K K G + D + P+++D
Sbjct: 73 SIDLVVDKLEKQIEKYKGKLLKRGARF----------------TNDHKTAAPAVPEEEDG 116
Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26
L VRTK F + P+ V EAI Q+ ++ H F+ F N ET ++N+VY+RK+G YGLI
Sbjct: 117 PRL----VRTKRFAIKPMPVEEAILQMNLLGHSFFVFSNAETEQVNVVYRRKDGNYGLIE 172
Query: 25 PK 20
P+
Sbjct: 173 PE 174
[208][TOP]
>UniRef100_Q71WR7 Ribosomal subunit interface protein n=9 Tax=Listeria
RepID=Q71WR7_LISMF
Length = 187
Score = 84.0 bits (206), Expect = 7e-15
Identities = 51/142 (35%), Positives = 77/142 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + +++RAEE + Y SIDL+ ++R++RK K K R KG R F+
Sbjct: 54 VEVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRD-KGAERDYFAY 112
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
D TP +++E + E+VRTK F + P+ EA+ Q+ ++ H FY +
Sbjct: 113 ----------SDVNGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVY 162
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
+ ET NIVY RK+G YGLI
Sbjct: 163 TDAETNGTNIVYSRKDGKYGLI 184
[209][TOP]
>UniRef100_C1I442 30S ribosomal protein S30AE family n=1 Tax=Clostridium sp.
7_2_43FAA RepID=C1I442_9CLOT
Length = 178
Score = 84.0 bits (206), Expect = 7e-15
Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 8/181 (4%)
Frame = -1
Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESI--------PVVVVVEVEKILVRAEEHAETTYG 386
T A+K ++ K+++ V E ++ V + + I++RAEE E Y
Sbjct: 13 TPALKEMIEKKLSKVKRYFDPEVEAKTTLSVQKNKQKVEITIPFNGIILRAEESTEDMYK 72
Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206
SIDLV + ++R++RK + K + + L+F ++ DE+ ++ D+
Sbjct: 73 SIDLVVAKLERQIRKQRTKLS-----RRNNESLRFPQL----------DEVALS---DEV 114
Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26
E EVV+ K F + P++V EA+ Q+E+V H+F+ +++ E ++ +VYKRK+G YGL+
Sbjct: 115 VETNGEVVKVKRFGVKPMSVEEAVLQMELVGHNFFVYQDSEANKVCVVYKRKDGDYGLLE 174
Query: 25 P 23
P
Sbjct: 175 P 175
[210][TOP]
>UniRef100_C0FTS3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans
DSM 16841 RepID=C0FTS3_9FIRM
Length = 176
Score = 84.0 bits (206), Expect = 7e-15
Identities = 50/145 (34%), Positives = 81/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + ++ +R+E+ + Y SIDLV +I+R+L+K + K ++ + F
Sbjct: 50 VEVTIPMKGSYIRSEQVSSDMYVSIDLVEEVIERQLKKYRTKLVTKQQNAAAVFKQDFL- 108
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
DE+ E D+EE+ +++RTK FDM P+ +A ++E++ HDFY F
Sbjct: 109 --------DEKSE--------DDEEI--KIIRTKKFDMKPMYPEDACVEMELLGHDFYVF 150
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N ET ++N+VYKRK YGLI P+
Sbjct: 151 INAETEDVNVVYKRKGNTYGLIEPE 175
[211][TOP]
>UniRef100_A6CQE4 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. SG-1
RepID=A6CQE4_9BACI
Length = 189
Score = 84.0 bits (206), Expect = 7e-15
Identities = 51/142 (35%), Positives = 76/142 (53%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + +++RAEE E Y +IDL+ ++R++RK K K R P ++
Sbjct: 54 VEVTIPMPHLVLRAEERHEDMYAAIDLIVDKLERQIRKHKTKVNRKMREKGSPKEFFAAQ 113
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
L +E K E E +EVVRTK F++ P+ EAI Q+ ++ H F+ F
Sbjct: 114 EGLTTSQLNE---------KARETEENDEVVRTKQFNLKPMDSEEAILQMNLLGHSFFIF 164
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
+ ET NIVYKR++G YGLI
Sbjct: 165 TDAETNATNIVYKRRDGKYGLI 186
[212][TOP]
>UniRef100_Q9T0K5 Extensin-like protein n=1 Tax=Arabidopsis thaliana
RepID=Q9T0K5_ARATH
Length = 760
Score = 84.0 bits (206), Expect = 7e-15
Identities = 39/56 (69%), Positives = 40/56 (71%), Gaps = 13/56 (23%)
Frame = +1
Query: 409 PQPAPVFSPPPPPPPP-----VYSPPPP-----PPPVYSPPPPPPSPPPP---SPP 537
P P PV+SPPPPPPPP VYSPPPP PPPVYSPPPPPP PPPP SPP
Sbjct: 458 PPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPP 513
Score = 83.6 bits (205), Expect = 9e-15
Identities = 36/47 (76%), Positives = 37/47 (78%), Gaps = 7/47 (14%)
Frame = +1
Query: 415 PAPVFSPPPPPP--PPVYS-----PPPPPPPVYSPPPPPPSPPPPSP 534
P PV+SPPPPPP PPVYS PPPPPPPVYSPPPPPP PPPP P
Sbjct: 432 PPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPP 478
Score = 83.2 bits (204), Expect = 1e-14
Identities = 39/57 (68%), Positives = 40/57 (70%), Gaps = 14/57 (24%)
Frame = +1
Query: 409 PQPAPVFS--------PPPPPPPPVYS---PPPPPPPVYSPPPPPPSPPPP---SPP 537
P PAP+FS PPP PPPPVYS PPPPPPPVYSPPPPPP PPPP SPP
Sbjct: 411 PPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPP 467
Score = 82.0 bits (201), Expect = 3e-14
Identities = 36/51 (70%), Positives = 37/51 (72%), Gaps = 8/51 (15%)
Frame = +1
Query: 409 PQPAPVFSPPPPPP----PPVYSPPPPPPPVYSPP----PPPPSPPPPSPP 537
P P PV+SPPPPPP PPVYSPPPPPPP PP PPPPSPPPP PP
Sbjct: 443 PPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPP 493
Score = 79.3 bits (194), Expect = 2e-13
Identities = 36/53 (67%), Positives = 37/53 (69%), Gaps = 9/53 (16%)
Frame = +1
Query: 409 PQPAPVFSPPPP----PPPPVYSPPPPPP-----PVYSPPPPPPSPPPPSPPS 540
P P PV+SPPPP PPPPVYSPPPPPP PVYSPPPPP PP PPS
Sbjct: 474 PPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPS 526
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/56 (64%), Positives = 37/56 (66%), Gaps = 13/56 (23%)
Frame = +1
Query: 409 PQPAPVFSPPPPPP----PPVYSPPPPPPPVYSPPPPPPSP---------PPPSPP 537
P P PV+SPPPPPP PPVYS PPPPPVYS PPPPPSP PPP PP
Sbjct: 489 PPPPPVYSPPPPPPPPPPPPVYS--PPPPPVYSSPPPPPSPAPTPVYCTRPPPPPP 542
Score = 68.9 bits (167), Expect = 2e-10
Identities = 29/49 (59%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Frame = +1
Query: 400 LHAPQPAPVFSPPPPP----PPPVYSPPPPPPPVYSPPPPPPSPPPPSP 534
+++P P PV+S PPPP P PVY PPPPP +SPPPP SPPPP P
Sbjct: 509 VYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEP 557
Score = 67.4 bits (163), Expect = 6e-10
Identities = 35/60 (58%), Positives = 38/60 (63%), Gaps = 14/60 (23%)
Frame = +1
Query: 400 LHAPQPAPVFSPPP----PPPPPVYSPPPPPP-----PVY---SPPPPPPSPPPP--SPP 537
+++P P P PPP PPPPPVYS PPPPP PVY PPPPP SPPPP SPP
Sbjct: 494 VYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPP 553
Score = 67.4 bits (163), Expect = 6e-10
Identities = 37/63 (58%), Positives = 39/63 (61%), Gaps = 19/63 (30%)
Frame = +1
Query: 406 APQPAPVFSPPPPPP-------PPV--YSPPPPPPPV-YSPPPPPP----SPPPP----- 528
+P P PV+SPPPPPP PP YSPPPPPP V YS PPPPP SPPPP
Sbjct: 600 SPPPTPVYSPPPPPPCIEPPPPPPCIEYSPPPPPPVVHYSSPPPPPVYYSSPPPPPVYYS 659
Query: 529 SPP 537
SPP
Sbjct: 660 SPP 662
Score = 66.2 bits (160), Expect = 1e-09
Identities = 32/54 (59%), Positives = 33/54 (61%), Gaps = 13/54 (24%)
Frame = +1
Query: 421 PVFSPPPP--PPPPVY---SPPPPPPPV--------YSPPPPPPSPPPPSPPSC 543
P SPPPP PPPP+Y SPPPPP PV YSPPPPPP PP PP C
Sbjct: 571 PPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCIEPPPPPPC 624
Score = 66.2 bits (160), Expect = 1e-09
Identities = 29/46 (63%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Frame = +1
Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPP----SPPPPSP 534
P P +SPPPPPP YS PPPPP YS PPPPP SPPPP P
Sbjct: 621 PPPCIEYSPPPPPPVVHYSSPPPPPVYYSSPPPPPVYYSSPPPPPP 666
Score = 65.5 bits (158), Expect = 2e-09
Identities = 32/56 (57%), Positives = 34/56 (60%), Gaps = 12/56 (21%)
Frame = +1
Query: 403 HAPQPA--PVFSPPPPPPP-------PVYSPPPPPPPVYSPPPPP---PSPPPPSP 534
H+P P P SPPPPP P PVYSPPPPPP + PPPPP SPPPP P
Sbjct: 579 HSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCIEPPPPPPCIEYSPPPPPP 634
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/62 (54%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
Frame = +1
Query: 373 PNLYSHR*FLHAPQPAPVFS----PPPP--PPPPVYSPPPPPPPVYSPPPPP-PSPPPPS 531
P +YS +P P PV+ PPPP PPPP +SPPPP P YS PPPP SPPP S
Sbjct: 515 PPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHS 574
Query: 532 PP 537
PP
Sbjct: 575 PP 576
Score = 64.7 bits (156), Expect = 4e-09
Identities = 33/54 (61%), Positives = 33/54 (61%), Gaps = 11/54 (20%)
Frame = +1
Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVY--SPPPPPP----SPPPP-----SPP 537
P P PV PPPPPVY PPPPPVY SPPPPPP SPPPP SPP
Sbjct: 630 PPPPPVVHYSSPPPPPVYYSSPPPPPVYYSSPPPPPPVHYSSPPPPEVHYHSPP 683
Score = 63.9 bits (154), Expect = 7e-09
Identities = 32/58 (55%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Frame = +1
Query: 406 APQPAPVFSPPPPPPPPVYSPPPPPPPVY--SPPP-------PPPSP----PPPSPPS 540
+P P PV+ PPPPP YS PPPPPPV+ SPPP PPPSP PP PPS
Sbjct: 640 SPPPPPVYYSSPPPPPVYYSSPPPPPPVHYSSPPPPEVHYHSPPPSPVHYSSPPPPPS 697
Score = 60.1 bits (144), Expect = 1e-07
Identities = 28/54 (51%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Frame = +1
Query: 397 FLHAPQPAPVFSPPPPPPPPV-YSPPPPPPPVYSPPPPPP----SPPPPSPPSC 543
+ +P P PV+ PPPPPPV YS PPPP Y PPP P SPPPP C
Sbjct: 647 YYSSPPPPPVYYSSPPPPPPVHYSSPPPPEVHYHSPPPSPVHYSSPPPPPSAPC 700
Score = 58.2 bits (139), Expect = 4e-07
Identities = 28/47 (59%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = +1
Query: 409 PQPAPVFSPPPPPPPPVYSPPP----PPPPVYSPPPPPPSPPPPSPP 537
P P P P PPPP P++S PP PPPP SPPPP SPPPP PP
Sbjct: 401 PLPPPSL-PSPPPPAPIFSTPPTLTSPPPP--SPPPPVYSPPPPPPP 444
Score = 57.4 bits (137), Expect = 7e-07
Identities = 30/58 (51%), Positives = 33/58 (56%), Gaps = 14/58 (24%)
Frame = +1
Query: 403 HAPQPAPVF--SPPP---------PPPPPVYSPPPPPPPVYSPPPPP---PSPPPPSP 534
H+P P+PV SPPP PPP PV PPPP V+ PPPP SPPPPSP
Sbjct: 680 HSPPPSPVHYSSPPPPPSAPCEESPPPAPVVHHSPPPPMVHHSPPPPVIHQSPPPPSP 737
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/66 (50%), Positives = 34/66 (51%), Gaps = 23/66 (34%)
Frame = +1
Query: 409 PQPAPVFSPPPP-----PPPPVY--SPPPP--------PPPVYSPPPP------PPSPPP 525
P P P SPPPP PP P Y SPPPP PPP +SPPPP PP PP
Sbjct: 537 PPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPT 596
Query: 526 P--SPP 537
P SPP
Sbjct: 597 PVSSPP 602
Score = 54.7 bits (130), Expect = 4e-06
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = +1
Query: 406 APQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537
+P+P PV +P PPP P PPPP P++S PP SPPPPSPP
Sbjct: 393 SPRP-PVVTPLPPPSLP---SPPPPAPIFSTPPTLTSPPPPSPP 432
[213][TOP]
>UniRef100_Q1GB46 Ribosomal protein S30EA n=2 Tax=Lactobacillus delbrueckii
RepID=Q1GB46_LACDA
Length = 185
Score = 83.6 bits (205), Expect = 9e-15
Identities = 49/145 (33%), Positives = 82/145 (56%)
Frame = -1
Query: 463 SIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK 284
S V V + + +++RAEE + Y SID VS ++R++RK K + R KG
Sbjct: 51 SAKVEVTIPLPYLVLRAEETTDDMYRSIDFVSEKLERQIRKYKTRVNRKSRE-KG----- 104
Query: 283 FSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 104
E +P + EE+++E P + ++VR K ++ P+ EAI Q++M++HDF
Sbjct: 105 VEEFFIPEDAPVEEEKVEKAP--------MFKIVRNKRVNLKPMDPEEAILQMDMLEHDF 156
Query: 103 YAFRNEETGEINIVYKRKEGGYGLI 29
+ F++ ET ++VY+R +G YGLI
Sbjct: 157 FVFQDAETNGTSVVYRRNDGSYGLI 181
[214][TOP]
>UniRef100_B7A6F1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thermus
aquaticus Y51MC23 RepID=B7A6F1_THEAQ
Length = 186
Score = 83.6 bits (205), Expect = 9e-15
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Frame = -1
Query: 508 VAAVVNKLVAEAAVES-IPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 332
+A VV L VE V +++ L+R EE + Y +ID + ++ +L++ KE
Sbjct: 37 MAKVVLSLAGSPHVEKRAKAEVQLDLPGGLLRVEEEDQDLYAAIDRMVDRLEIQLKRYKE 96
Query: 331 KETDHGRHM-KGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPP 155
+ RH +GP P P + + + + EEE +VR K F+M P
Sbjct: 97 RRFVGRRHTYQGP----------PPPEVRDMEAL-----RKPEEEEGPRIVRVKRFEMKP 141
Query: 154 LTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLIIP 23
+ EA+ Q+E + HDF+ FRN +T EIN+VY+RK+G YGLI P
Sbjct: 142 MDPEEAVFQMEALGHDFFVFRNAKTDEINVVYRRKDGNYGLIEP 185
[215][TOP]
>UniRef100_A3IC40 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. B14905
RepID=A3IC40_9BACI
Length = 183
Score = 83.6 bits (205), Expect = 9e-15
Identities = 50/142 (35%), Positives = 76/142 (53%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + ++ + +RAEE Y ++DL+ ++R++RK K K R +G L F+
Sbjct: 54 VEVTIPMKNLTLRAEERHNDMYAAVDLIVDKLERQIRKHKTKVNRKFREREGAG-LYFAT 112
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ + +E+E I VRTK FD+ P+ EA+ Q+ M+ HDFY F
Sbjct: 113 TQAVVDTTLDEEEYSI--------------VRTKQFDLKPMDQEEAVLQMNMLGHDFYVF 158
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
+ E+ NIVYKRK+G YGLI
Sbjct: 159 TDAESNGTNIVYKRKDGKYGLI 180
[216][TOP]
>UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale
ATCC 33656 RepID=C4ZI34_EUBR3
Length = 175
Score = 83.2 bits (204), Expect = 1e-14
Identities = 51/145 (35%), Positives = 80/145 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + + ++R+E+ + Y SIDLV +I+R+LRK + K + K++
Sbjct: 50 IEVTIPAKGHVIRSEQVSNDMYVSIDLVEEVIERQLRKYRTKISAK----------KYAP 99
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
I ++D +E DD E+ ++VRTK F M P+ +A Q+E+ HDF+ F
Sbjct: 100 AIF------QDDFVEA----DDAEDEEIKIVRTKRFGMKPMYPEDACIQMELSGHDFFVF 149
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
RN E E+N+VYKRK YGLI P+
Sbjct: 150 RNAENDEVNVVYKRKGHTYGLIEPE 174
[217][TOP]
>UniRef100_B5YI17 SSU ribosomal protein S30P n=1 Tax=Thermodesulfovibrio yellowstonii
DSM 11347 RepID=B5YI17_THEYD
Length = 173
Score = 83.2 bits (204), Expect = 1e-14
Identities = 43/142 (30%), Positives = 81/142 (57%)
Frame = -1
Query: 448 VVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 269
V+++V+ L++AE E Y ++D V +++++ K KEK
Sbjct: 52 VLLKVDGHLIQAEGKTEDLYSAVDQVVEKLEKQVLKYKEK-------------------- 91
Query: 268 LPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRN 89
+ + ++++ I+ +E E + +V+ K FD+ P++ EA+DQLE++D DF+ F N
Sbjct: 92 --VQNKNKKETIKYPSALSEEVETAKRIVKYKKFDLRPMSPEEAVDQLELLDKDFFIFIN 149
Query: 88 EETGEINIVYKRKEGGYGLIIP 23
+G++N++YKRK+G +GLI P
Sbjct: 150 SFSGDVNVIYKRKDGNFGLIEP 171
[218][TOP]
>UniRef100_B5YF17 Ribosomal subunit interface protein n=1 Tax=Dictyoglomus
thermophilum H-6-12 RepID=B5YF17_DICT6
Length = 179
Score = 83.2 bits (204), Expect = 1e-14
Identities = 52/143 (36%), Positives = 78/143 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V ++ +++A E + SIDLV ++ +L+++KEK D GR
Sbjct: 55 VEVTIKANGRIIKASEANQDFRTSIDLVVDKLETQLKRLKEKLVDKGRRA---------- 104
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
E EI +K+ EE+ +VV+ K F + P+ V EAI Q+E++ HDF+ F
Sbjct: 105 ----------ESIREILAEKEVEEK--PQVVKVKRFLLKPMDVEEAILQMELLGHDFFIF 152
Query: 94 RNEETGEINIVYKRKEGGYGLII 26
R+ ET I +VYKRK+G YGLII
Sbjct: 153 RDAETDRIGVVYKRKDGKYGLII 175
[219][TOP]
>UniRef100_A6TLE5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLE5_ALKMQ
Length = 177
Score = 83.2 bits (204), Expect = 1e-14
Identities = 52/145 (35%), Positives = 78/145 (53%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ + + + ++RAEE E Y SID V + + +LRK K K N+ K E
Sbjct: 50 IEITIPFDGSILRAEEKTEDMYASIDGVVNKLTSQLRKHKTKME---------NKTKKYE 100
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
I + I + D +E ++V+TK F M P+ EA+ Q+E++ H+FY F
Sbjct: 101 TI-------RFENIPTYVEDVDSDE--SKIVKTKRFAMKPMHSEEAVLQMELIGHNFYMF 151
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N ET E+N+VYKRK+G YGLI P+
Sbjct: 152 ANAETDEVNVVYKRKDGNYGLIEPE 176
[220][TOP]
>UniRef100_C9L411 Ribosomal subunit interface protein n=1 Tax=Blautia hansenii DSM
20583 RepID=C9L411_RUMHA
Length = 176
Score = 83.2 bits (204), Expect = 1e-14
Identities = 52/145 (35%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ ++R+E+ + Y SIDLV II+R+LRK K K D +
Sbjct: 50 IEVTIPVKGNIIRSEQVSSDMYVSIDLVEEIIERQLRKYKNKIIDKKQS----------- 98
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 98
+G + + +E KD EE+ E +++RTK F P+ +A Q+E++ H+F+
Sbjct: 99 ------AGFQPEFVE----KDYEEDTNEIKIIRTKKFGFKPMYPEDACVQMELLGHNFFV 148
Query: 97 FRNEETGEINIVYKRKEGGYGLIIP 23
F N ET E+N+VYKRK YGLI P
Sbjct: 149 FLNAETEEVNVVYKRKGNTYGLIEP 173
[221][TOP]
>UniRef100_C5QQC2 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus
epidermidis M23864:W1 RepID=C5QQC2_STAEP
Length = 191
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/158 (29%), Positives = 89/158 (56%)
Frame = -1
Query: 502 AVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 323
AV + V + + + V + ++ + +RAEE + Y IDL+++ ++R++RK K +
Sbjct: 38 AVAHVKVKTYSNSATKIEVTIPLKDVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRVN 97
Query: 322 DHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 143
R +G + +EV P +E+ + D++ ++ E++R+K F + P+
Sbjct: 98 RKHRD-RGDQEVFVAEVQEATP-----EEVSGAEEPDNDSDI--EIIRSKQFSLKPMDSE 149
Query: 142 EAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
EA+ Q+ ++ HDF+ F + ET +IVY+RK+G YGLI
Sbjct: 150 EAVLQMNLLGHDFFIFTDRETDGTSIVYRRKDGKYGLI 187
[222][TOP]
>UniRef100_C2ECJ0 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
ruminis ATCC 25644 RepID=C2ECJ0_9LACO
Length = 186
Score = 83.2 bits (204), Expect = 1e-14
Identities = 51/142 (35%), Positives = 81/142 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + +++RAEE + Y SIDLV+ ++R++RK K K R KG +F
Sbjct: 54 VEVTIPLPYLVLRAEETSPDMYASIDLVTDKLERQIRKHKTKLNRKSRE-KGFKTFEF-- 110
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+P+ D P++ E+ E+VRTK + P+ EAI Q++M+ HDF+ +
Sbjct: 111 ----VPTAD--------PKEAAAEDKKFEIVRTKSVSLKPMDAEEAILQMDMLGHDFFIY 158
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
+ ET I+IVY+R++G YGLI
Sbjct: 159 EDAETSGIDIVYRRRDGRYGLI 180
[223][TOP]
>UniRef100_A5VIF9 Sigma 54 modulation protein / SSU ribosomal protein S30P n=6
Tax=Lactobacillus reuteri RepID=A5VIF9_LACRD
Length = 182
Score = 83.2 bits (204), Expect = 1e-14
Identities = 52/142 (36%), Positives = 82/142 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + + +RAEE + YGSIDLV+ ++R++RK K K R KG L+F
Sbjct: 54 VEVTIPLPYLTLRAEETSNDMYGSIDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF-- 110
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+PS ++ T +DDE + +VRTK + P+ EA+ Q++M+ H+F+ F
Sbjct: 111 ----IPSDNDG-----TDGQDDELK----IVRTKQVSLKPMDPEEAVLQMDMLGHNFFIF 157
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
++ ET +IVY+R +G YGLI
Sbjct: 158 QDAETNGTSIVYRRNDGRYGLI 179
[224][TOP]
>UniRef100_B2GAI6 Ribosomal subunit interface protein n=3 Tax=Lactobacillus fermentum
RepID=B2GAI6_LACF3
Length = 181
Score = 83.2 bits (204), Expect = 1e-14
Identities = 48/142 (33%), Positives = 78/142 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + + +RAEE + YGS+DLV+ ++R++RK K K R KG L+F +
Sbjct: 54 VEVTIPLPYLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGYKNLEFVD 112
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
TP ++ E ++VRTK + P+ EA+ Q++M+ HDF+ +
Sbjct: 113 ----------------TPSEEVEASDSLKIVRTKQIPLKPMDSEEAVLQMDMLGHDFFVY 156
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
++ ET +IVY+R +G YGLI
Sbjct: 157 QDAETNGTSIVYRRNDGRYGLI 178
[225][TOP]
>UniRef100_C0WUJ7 Ribosome-associated inhibitor protein Y n=3 Tax=Lactobacillus
RepID=C0WUJ7_LACBU
Length = 194
Score = 83.2 bits (204), Expect = 1e-14
Identities = 50/142 (35%), Positives = 80/142 (56%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + + +RAEE + Y S+DLV+ ++R++RK K K R KG L+F
Sbjct: 61 VEVTIPLPFLTLRAEELSNDLYASVDLVTDKLERQIRKYKTKVNRKSRE-KGFKNLEF-- 117
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+P+ D+ T D+ + +VVRTK + P+ EAI Q++M+ HDF+ +
Sbjct: 118 ----VPNDDQ------TTSDSDDNQSQFDVVRTKRLALKPMDNEEAILQMDMLGHDFFIY 167
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
+ +T I+IVY+R +G YGLI
Sbjct: 168 EDADTSNIDIVYRRNDGRYGLI 189
[226][TOP]
>UniRef100_C0WCZ2 Sigma-54 modulation protein n=1 Tax=Acidaminococcus sp. D21
RepID=C0WCZ2_9FIRM
Length = 180
Score = 83.2 bits (204), Expect = 1e-14
Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 8/182 (4%)
Frame = -1
Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIP--------VVVVVEVEKILVRAEEHAETTYG 386
T A+K V K+V + + + ++ V + V I++RA+E +E Y
Sbjct: 13 TPALKDYVEKKVETITKQFKTVGEITAVMRIERNKHIVEITVPASGIVLRAQEGSENMYA 72
Query: 385 SIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDE 206
SID I+R++ K K R MK F + +P SGD E+ D E
Sbjct: 73 SIDNCVEKIERQIHKYKT------RLMKRKYN-NFRDAAVPPVSGDVEEA-----SADGE 120
Query: 205 EELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLII 26
+ V RTK + M P+ V EAI Q+ M++HDF+ F N+ET + +VY+RK G YGLI
Sbjct: 121 FK----VARTKTYAMRPMNVQEAIMQMNMLNHDFFVFFNDETESMAVVYRRKAGDYGLIN 176
Query: 25 PK 20
P+
Sbjct: 177 PE 178
[227][TOP]
>UniRef100_B6G1P8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6G1P8_9CLOT
Length = 190
Score = 83.2 bits (204), Expect = 1e-14
Identities = 51/141 (36%), Positives = 80/141 (56%)
Frame = -1
Query: 451 VVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 272
V++ V +R EE + Y +IDLV + R++ K K+K + G +++
Sbjct: 60 VMIPNVNGHTIRVEEEQDNLYPAIDLVCDKLSRQIIKYKDK---FKTRVPGNFSIRYE-- 114
Query: 271 ILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 92
G EE E+ + ++ E +IE R K F++ P+++ EAI Q+ + DHDFY F+
Sbjct: 115 ------GIEELAQELDYEVEEPEVVIE---RRKKFNLKPMSIEEAILQMNLTDHDFYMFK 165
Query: 91 NEETGEINIVYKRKEGGYGLI 29
+ E+ EI +VYKRKEGGYGLI
Sbjct: 166 DRESFEICLVYKRKEGGYGLI 186
[228][TOP]
>UniRef100_B6FRG1 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM
1787 RepID=B6FRG1_9CLOT
Length = 178
Score = 83.2 bits (204), Expect = 1e-14
Identities = 52/145 (35%), Positives = 78/145 (53%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ ++R+E+ ++ Y SIDLV +I+R+LRK K K R +G N SE
Sbjct: 50 IEVTIPVKGHIIRSEQVSDDMYVSIDLVEEVIERQLRKYKNKLI--ARQQEGGNFQ--SE 105
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
DEI+I +RTK F + P+ +A Q+E++ H+F+ F
Sbjct: 106 FFEAEQDTSNNDEIKI--------------IRTKRFGIKPMFPEDACVQMELLGHNFFVF 151
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N ET E+N+VYKRK YGLI P+
Sbjct: 152 SNAETDEVNVVYKRKNNTYGLIEPE 176
[229][TOP]
>UniRef100_A7B7M8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
29149 RepID=A7B7M8_RUMGN
Length = 185
Score = 83.2 bits (204), Expect = 1e-14
Identities = 48/147 (32%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ ++R+E+ ++ Y S+DLV +I+R+LRK K N+L
Sbjct: 50 IEVTIPVKGNIIRSEQTSDDMYVSVDLVEEVIERQLRKYK-------------NKLVARS 96
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEV--VRTKYFDMPPLTVFEAIDQLEMVDHDFY 101
P SG + + + +D+ + +E+ VRTK F + P+ +A Q++++ H F+
Sbjct: 97 QGHPTASGSGNNFKKEFFESEDDTSVDDEIRIVRTKRFGIKPMYPEDACIQMDLLGHAFF 156
Query: 100 AFRNEETGEINIVYKRKEGGYGLIIPK 20
F N ET E+N+VYKRK+G +GLI P+
Sbjct: 157 VFCNAETDEVNVVYKRKDGSFGLIEPE 183
[230][TOP]
>UniRef100_A4L2S0 Ribosome-associated protein Y n=1 Tax=Lactobacillus reuteri
RepID=A4L2S0_LACRE
Length = 182
Score = 83.2 bits (204), Expect = 1e-14
Identities = 52/142 (36%), Positives = 82/142 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + + +RAEE + YGSIDLV+ ++R++RK K K R KG L+F
Sbjct: 54 VEVTIPLPYLTLRAEETSNDMYGSIDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF-- 110
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+PS ++ T +DDE + +VRTK + P+ EA+ Q++M+ H+F+ F
Sbjct: 111 ----IPSDNDG-----TDGQDDELK----IVRTKQVSLKPMDPEEAVLQMDMLGHNFFIF 157
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
++ ET +IVY+R +G YGLI
Sbjct: 158 QDAETNGTSIVYRRNDGRYGLI 179
[231][TOP]
>UniRef100_B9RZI2 Protein binding protein, putative n=1 Tax=Ricinus communis
RepID=B9RZI2_RICCO
Length = 829
Score = 83.2 bits (204), Expect = 1e-14
Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 5/52 (9%)
Frame = +1
Query: 400 LHAPQPAPVFSPPPP-PPPPVYSPPPP----PPPVYSPPPPPPSPPPPSPPS 540
+H+P P PV+SPPPP PPPPV+SPPPP PPPV+SPPPP SPPPPSPPS
Sbjct: 679 VHSPPP-PVYSPPPPSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPSPPS 729
Score = 77.8 bits (190), Expect = 5e-13
Identities = 35/46 (76%), Positives = 36/46 (78%), Gaps = 5/46 (10%)
Frame = +1
Query: 415 PAPVFSPPPP---PPPPVYSPPPP--PPPVYSPPPPPPSPPPPSPP 537
P P SPPPP PPPPVYSPPPP PPPV+SPPPP SPPPPSPP
Sbjct: 650 PPPTQSPPPPVNSPPPPVYSPPPPSPPPPVHSPPPPVYSPPPPSPP 695
Score = 77.0 bits (188), Expect = 8e-13
Identities = 37/56 (66%), Positives = 42/56 (75%), Gaps = 10/56 (17%)
Frame = +1
Query: 400 LHAPQPAPVFSPPPPP----PPPVYSPPPP----PPPVYSPPPPPPSPPPP--SPP 537
+H+P P PV+SPPPPP PPPV+SPPPP PPP+YSPPPP SPPPP SPP
Sbjct: 734 MHSPPP-PVYSPPPPPVRSPPPPVHSPPPPVHSPPPPIYSPPPPRFSPPPPRFSPP 788
Score = 74.3 bits (181), Expect = 5e-12
Identities = 37/57 (64%), Positives = 41/57 (71%), Gaps = 11/57 (19%)
Frame = +1
Query: 400 LHAPQPAPVFSPPPP---PPPPVYSPPPP-----PPPVYSPPPPPPSPPPP---SPP 537
+H+P P PV SPPPP PPPPVYSPPPP PPP++SPPPP SPPPP SPP
Sbjct: 698 VHSPPP-PVHSPPPPVHSPPPPVYSPPPPSPPSPPPPMHSPPPPVYSPPPPPVRSPP 753
Score = 73.6 bits (179), Expect = 9e-12
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 9/67 (13%)
Frame = +1
Query: 364 SRTPNLYSHR*FLHAPQPAPVFSPPPP---PPPPVYSPPPP----PPPVYSPPPPPPSPP 522
S P ++S +++P P PV SPPPP PPPPV+SPPPP PPP +SPPPP SPP
Sbjct: 729 SPPPPMHSPPPPVYSPPPPPVRSPPPPVHSPPPPVHSPPPPIYSPPPPRFSPPPPRFSPP 788
Query: 523 PP--SPP 537
PP SPP
Sbjct: 789 PPTSSPP 795
Score = 73.2 bits (178), Expect = 1e-11
Identities = 39/69 (56%), Positives = 46/69 (66%), Gaps = 11/69 (15%)
Frame = +1
Query: 364 SRTPNLYSHR*FLHAPQPAPVFSPPPP----PPPPVYSPPPP-----PPPVYSPPPPPPS 516
S P ++S +H+P P PV+SPPPP PPPP++SPPPP PPPV SPPPP S
Sbjct: 700 SPPPPVHSPPPPVHSPPP-PVYSPPPPSPPSPPPPMHSPPPPVYSPPPPPVRSPPPPVHS 758
Query: 517 PPPP--SPP 537
PPPP SPP
Sbjct: 759 PPPPVHSPP 767
Score = 65.5 bits (158), Expect = 2e-09
Identities = 31/50 (62%), Positives = 31/50 (62%), Gaps = 7/50 (14%)
Frame = +1
Query: 409 PQPAPVFSPPPP---PPPPVYSPPPP----PPPVYSPPPPPPSPPPPSPP 537
P P SP PP PPPP SPPPP PPPVYSPPPP P PP SPP
Sbjct: 634 PPTTPEQSPSPPGQSPPPPTQSPPPPVNSPPPPVYSPPPPSPPPPVHSPP 683
Score = 60.8 bits (146), Expect = 6e-08
Identities = 30/51 (58%), Positives = 31/51 (60%), Gaps = 10/51 (19%)
Frame = +1
Query: 415 PAPVFSPPPP------PPPPVYSPPPP----PPPVYSPPPPPPSPPPPSPP 537
P+P PPP P PP SPPPP PPPV SPPPP SPPPPSPP
Sbjct: 626 PSPPGQSPPPTTPEQSPSPPGQSPPPPTQSPPPPVNSPPPPVYSPPPPSPP 676
Score = 56.2 bits (134), Expect = 1e-06
Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 20/78 (25%)
Frame = +1
Query: 364 SRTPNLYSHR*FLHAPQPAPVFSPPPP---PPPPVYSPPPP-----PPPVYSPPPP---- 507
S P ++S +H+P P P++SPPPP PPPP +SPPPP P P + PPP
Sbjct: 751 SPPPPVHSPPPPVHSPPP-PIYSPPPPRFSPPPPRFSPPPPTSSPPPTPTVAAPPPEDFI 809
Query: 508 -PP-------SPPPPSPP 537
PP SPPPP P
Sbjct: 810 LPPNIGFQYSSPPPPMFP 827
[232][TOP]
>UniRef100_Q9RVE7 Protein DR_1082 n=1 Tax=Deinococcus radiodurans RepID=UA82_DEIRA
Length = 191
Score = 83.2 bits (204), Expect = 1e-14
Identities = 51/142 (35%), Positives = 80/142 (56%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + V ++RAEEH Y +ID S +++R+LRK K R+MK R +
Sbjct: 56 VEVQLNVPGGIIRAEEHHADMYAAIDKASDVLERQLRKFKT------RYMK--QRQEGRP 107
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
LP P+ E + DD E E+VR K F++ P++ +A+ Q+E + HDFY F
Sbjct: 108 EPLPGPAEAEVNAQGSGAAMDDVSEFHPEIVRQKRFELRPMSAEDAVVQMEALGHDFYVF 167
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
++ + G+ +VY+R++G YGLI
Sbjct: 168 QDLQ-GQTGVVYRRRDGHYGLI 188
[233][TOP]
>UniRef100_UPI0001B5A5D6 ribosomal subunit interface protein n=1 Tax=Staphylococcus aureus
subsp. aureus str. CF-Marseille RepID=UPI0001B5A5D6
Length = 163
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/158 (29%), Positives = 87/158 (55%)
Frame = -1
Query: 502 AVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 323
AV + V + + + V + ++ + +RAEE + Y IDL+++ ++R++RK K +
Sbjct: 11 AVAHVKVKTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRIN 70
Query: 322 DHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 143
R +G + +E+ E E ++ D+ E+ E++R+K F + P+
Sbjct: 71 RKSRD-RGDQEVFVAEL-------QEMQETQVDNDAYDDNEI--EIIRSKEFSLKPMDSE 120
Query: 142 EAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
EA+ Q+ ++ HDF+ F + ET +IVY+RK+G YGLI
Sbjct: 121 EAVLQMNLLGHDFFVFTDRETDGTSIVYRRKDGKYGLI 158
[234][TOP]
>UniRef100_UPI0001794B34 hypothetical protein CLOSPO_00786 n=1 Tax=Clostridium sporogenes
ATCC 15579 RepID=UPI0001794B34
Length = 175
Score = 82.8 bits (203), Expect = 1e-14
Identities = 44/145 (30%), Positives = 76/145 (52%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + +++R EE E Y SID+V ++R++RK K K
Sbjct: 50 IEVTIPFHGVILRGEETTEDMYASIDMVIDKLERQIRKQKTK------------------ 91
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
L D + P + E ++V+TK F M P++ EA+ Q+E++ H+F+ +
Sbjct: 92 --LQRNIHDGSLRFQYIPDYESGENKETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVY 149
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
+N +T E+N++Y+RK+G YGLI P+
Sbjct: 150 QNADTEEVNVIYRRKDGNYGLIEPE 174
[235][TOP]
>UniRef100_B1HN67 Hypothetical yvyD protein n=1 Tax=Lysinibacillus sphaericus C3-41
RepID=B1HN67_LYSSC
Length = 183
Score = 82.8 bits (203), Expect = 1e-14
Identities = 50/142 (35%), Positives = 75/142 (52%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + ++ + +RAEE Y ++DL+ ++R++RK K K R +G L F+
Sbjct: 54 VEVTIPMKNLTLRAEERHNDMYAAVDLIVDKLERQIRKHKTKVNRKFREREGAG-LYFAT 112
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ +E+E I VRTK FD+ P+ EA+ Q+ M+ HDFY F
Sbjct: 113 TQAVADTTLDEEEYSI--------------VRTKQFDLKPMDQEEAVLQMNMLGHDFYVF 158
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
+ E+ NIVYKRK+G YGLI
Sbjct: 159 TDAESNGTNIVYKRKDGKYGLI 180
[236][TOP]
>UniRef100_Q62PU3 YvyD n=2 Tax=Bacillus licheniformis ATCC 14580 RepID=Q62PU3_BACLD
Length = 187
Score = 82.8 bits (203), Expect = 1e-14
Identities = 53/144 (36%), Positives = 80/144 (55%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + + + +RAE H E Y +IDL ++ ++R++RK K K R KG ++ F+E
Sbjct: 54 VEVTIPMTDLSLRAEVHHEDMYNAIDLATNKLERQIRKHKTKVNRKFRE-KGSSKHVFAE 112
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ I Q+D E+E +VVR K F++ P+ EAI Q+ M+ H F+ F
Sbjct: 113 ----------GNGIGTAVQEDIEDEQ-PQVVRQKRFNLKPMDNEEAILQMNMLGHSFFVF 161
Query: 94 RNEETGEINIVYKRKEGGYGLIIP 23
N ET N+VY+R +G YGLI P
Sbjct: 162 TNAETNLTNVVYRRNDGKYGLIEP 185
[237][TOP]
>UniRef100_C6JE61 Putative uncharacterized protein n=1 Tax=Ruminococcus sp.
5_1_39BFAA RepID=C6JE61_9FIRM
Length = 175
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/145 (33%), Positives = 78/145 (53%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + V+ ++R+E+ + Y SIDLV +I+R+LRK K K D K F +
Sbjct: 50 IEVTIPVKGNIIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVD-----KQQAAANFQK 104
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
L KD +E+ +++RTK F + P+ +A Q+E++ H+F+ F
Sbjct: 105 AYL---------------DKDYDEDEEVKIIRTKKFGIKPMYPEDACVQMELLGHNFFVF 149
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
N ET ++N+VYKRK YGLI P+
Sbjct: 150 YNAETEQVNVVYKRKGNTYGLIEPE 174
[238][TOP]
>UniRef100_C0GF81 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF81_9FIRM
Length = 177
Score = 82.8 bits (203), Expect = 1e-14
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIK---EKETDHGRHMKGPNRLK 284
V V +E +++RAEE Y SID V ++R++ K K ++ G +K N L
Sbjct: 50 VEVTAAIEGMILRAEESTGDMYASIDSVVDKLERQIAKYKTRINRKARQGGGIKAMNEL- 108
Query: 283 FSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 104
PQ +DEEE +VV+TK F + P+ V EAI Q+ ++ HDF
Sbjct: 109 --------------------PQVEDEEE-DWDVVKTKRFVVKPMPVEEAILQMNLLGHDF 147
Query: 103 YAFRNEETGEINIVYKRKEGGYGLIIP 23
+ F N + ++N++Y+RK+G YGLI P
Sbjct: 148 FVFMNADNEDVNVIYRRKDGKYGLIEP 174
[239][TOP]
>UniRef100_A7FQJ2 Ribosomal subunit interface protein n=7 Tax=Clostridium botulinum
RepID=A7FQJ2_CLOB1
Length = 175
Score = 82.8 bits (203), Expect = 1e-14
Identities = 44/145 (30%), Positives = 76/145 (52%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + +++R EE E Y SID+V ++ ++RK K K
Sbjct: 50 IEVTIPFHGVILRGEETTEDMYASIDMVIDKLEGQVRKQKTK------------------ 91
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
L D + P + EE ++V+TK F M P++ EA+ Q+E++ H+F+ +
Sbjct: 92 --LQRKIHDGSLRFQYIPDYESEENKETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVY 149
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
+N +T E+N++Y+RK+G YGLI P+
Sbjct: 150 QNADTEEVNVIYRRKDGNYGLIEPE 174
[240][TOP]
>UniRef100_A8SVF0 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
27759 RepID=A8SVF0_9FIRM
Length = 175
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/145 (33%), Positives = 83/145 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ V + ++ ++RAE+ ++ Y SIDLV +I+R++ K ++K D +++ N E
Sbjct: 50 IEVTIPMKGHIIRAEQVSDDMYVSIDLVVEVIERQVTKHRKKLIDKEQNVAYLNEAFVDE 109
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
I +++D+I+I VRTK F + P+ +A Q++++ H+FY F
Sbjct: 110 DI------EDDDDIKI--------------VRTKKFAVKPMYPEDACIQMDLLGHNFYVF 149
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
RN ET E+N+VYKRK YGLI P+
Sbjct: 150 RNAETDEVNVVYKRKGNTYGLIEPE 174
[241][TOP]
>UniRef100_Q2YSH7 Uncharacterized protein SAB0704 n=35 Tax=Staphylococcus aureus
RepID=Y704_STAAB
Length = 190
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/158 (29%), Positives = 87/158 (55%)
Frame = -1
Query: 502 AVVNKLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 323
AV + V + + + V + ++ + +RAEE + Y IDL+++ ++R++RK K +
Sbjct: 38 AVAHVKVKTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRIN 97
Query: 322 DHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 143
R +G + +E+ E E ++ D+ E+ E++R+K F + P+
Sbjct: 98 RKSRD-RGDQEVFVAEL-------QEMQETQVDNDAYDDNEI--EIIRSKEFSLKPMDSE 147
Query: 142 EAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
EA+ Q+ ++ HDF+ F + ET +IVY+RK+G YGLI
Sbjct: 148 EAVLQMNLLGHDFFVFTDRETDGTSIVYRRKDGKYGLI 185
[242][TOP]
>UniRef100_P13983 Extensin n=1 Tax=Nicotiana tabacum RepID=EXTN_TOBAC
Length = 620
Score = 82.8 bits (203), Expect = 1e-14
Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = +1
Query: 349 TFSE*SRTPNLYSHR*FLHAPQPAPVFSPPPP---PPPPVYSPPPPPPPVYSPPPPPPSP 519
T+++ P YS ++P P P +SPPPP PPPP Y+ PPPPPP YSPPPP SP
Sbjct: 422 TYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSP 481
Query: 520 PPPSP 534
PPPSP
Sbjct: 482 PPPSP 486
Score = 73.2 bits (178), Expect = 1e-11
Identities = 36/63 (57%), Positives = 37/63 (58%), Gaps = 19/63 (30%)
Frame = +1
Query: 406 APQPAPVFSPPPP------------PPPPVYSPPPPP-----PPVYSPPPPPPSPPPP-- 528
A P P +SPPPP PPPPVYSPPPPP PP Y PPPPP SPPPP
Sbjct: 323 AYSPPPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSF 382
Query: 529 SPP 537
SPP
Sbjct: 383 SPP 385
Score = 71.6 bits (174), Expect = 3e-11
Identities = 36/68 (52%), Positives = 36/68 (52%), Gaps = 25/68 (36%)
Frame = +1
Query: 409 PQPAPVFSPPPPP--PPPVYSPPPP-------------PPPVYSPPPPP----------P 513
P P P FSPPPP PPP YSPPPP PPPVYSPPPPP P
Sbjct: 311 PTPTPTFSPPPPAYSPPPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLP 370
Query: 514 SPPPPSPP 537
PPP SPP
Sbjct: 371 PPPPSSPP 378
Score = 71.2 bits (173), Expect = 4e-11
Identities = 50/112 (44%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Frame = +1
Query: 235 FHPPHPPRVVAI*PH*ISTYWVPSCGDHDQSLFP*SFS----TFSE*SRTPNLYSHR*FL 402
+ PP PP P TY P S P SFS T+ + P YS
Sbjct: 353 YSPPPPPSYSPPPP----TYLPPP---PPSSPPPPSFSPPPPTYEQSPPPPPAYS----- 400
Query: 403 HAPQPAP-VFSPPPP---PPPPVYSPPPPPPPVYSPPPPPPSPPPP---SPP 537
P PAP +SPPPP PPPP Y+ PPP PP YSPPPP SPPPP SPP
Sbjct: 401 -PPLPAPPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPP 451
Score = 69.3 bits (168), Expect = 2e-10
Identities = 34/60 (56%), Positives = 37/60 (61%), Gaps = 13/60 (21%)
Frame = +1
Query: 397 FLHAPQPAPVFSPPPP----PPPPVYSPPPP----PPPVYSPPPPPP---SPPPP--SPP 537
+ P P +SPPPP PPPP YSPPPP PPP Y+ PPPPP SPPPP SPP
Sbjct: 423 YAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPP 482
Score = 68.9 bits (167), Expect = 2e-10
Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 17/65 (26%)
Frame = +1
Query: 397 FLHAPQPAPVFSPPPP-----PPPPVYSPPPP---------PPPVYSPPPPPPSPPP--- 525
+ +PQP+P +SPPPP PP P+YSPPPP P P +SPPPP SPPP
Sbjct: 272 YAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTPTPTFSPPPPAYSPPPTYS 331
Query: 526 PSPPS 540
P PP+
Sbjct: 332 PPPPT 336
Score = 67.0 bits (162), Expect = 8e-10
Identities = 32/54 (59%), Positives = 34/54 (62%), Gaps = 13/54 (24%)
Frame = +1
Query: 415 PAPVFSPPPPP----PPPVYSPPPPP----PPVYSPPPP-----PPSPPPPSPP 537
P PV+SPPPPP PPP Y PPPPP PP +SPPPP PP PP SPP
Sbjct: 349 PPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPP 402
Score = 67.0 bits (162), Expect = 8e-10
Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 11/53 (20%)
Frame = +1
Query: 415 PAPVFSPPPP------PPPPVYSPPP-----PPPPVYSPPPPPPSPPPPSPPS 540
P P ++ PPP PPPP YSPPP PPPP YSPPPP + PPP PP+
Sbjct: 419 PPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPT 471
Score = 65.5 bits (158), Expect = 2e-09
Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 22/75 (29%)
Frame = +1
Query: 379 LYSHR*FLHAPQPAPVFSPPPP----------PPPPVYSPPPP-------PPPVYSPP-- 501
+YS +++P P P +SPPPP PPPP +SPPPP PPP YSPP
Sbjct: 345 IYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLP 404
Query: 502 -PPPPSPPPP--SPP 537
PP SPPPP SPP
Sbjct: 405 APPTYSPPPPTYSPP 419
Score = 63.9 bits (154), Expect = 7e-09
Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 13/57 (22%)
Frame = +1
Query: 409 PQPAPVFSPPPP-------------PPPPVYSPPPPPPPVYSPPPPPPSPPPPSPPS 540
PQP P +SPPPP PPPP YSPPPP P +YSPPPP SP PP P+
Sbjct: 260 PQP-PTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSP-IYSPPPPAYSPSPPPTPT 314
Score = 62.0 bits (149), Expect = 3e-08
Identities = 32/58 (55%), Positives = 34/58 (58%), Gaps = 14/58 (24%)
Frame = +1
Query: 403 HAP---QPAPVFSPPPPP----PPPVYSPPPP-------PPPVYSPPPPPPSPPPPSP 534
HAP QP+P+ PP P PP YSPPPP P P YSPPPP SPPPPSP
Sbjct: 239 HAPPTHQPSPLRHLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSP 296
Score = 62.0 bits (149), Expect = 3e-08
Identities = 32/74 (43%), Positives = 38/74 (51%), Gaps = 26/74 (35%)
Frame = +1
Query: 397 FLHAPQPAPVFSPP-----PPPPPPVYSPPPPP----PPVYSPPPP-------------- 507
+ P P P +SPP PPPP P+YSPPPP PP +SPPPP
Sbjct: 462 YAQPPPPPPTYSPPPPAYSPPPPSPIYSPPPPQVQPLPPTFSPPPPRRIHLPPPPHRQPR 521
Query: 508 PPSP---PPPSPPS 540
PP+P PPSPP+
Sbjct: 522 PPTPTYGQPPSPPT 535
Score = 61.6 bits (148), Expect = 4e-08
Identities = 32/62 (51%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Frame = +1
Query: 373 PNLYSHR*FLHAPQPAPVFSPPPP-----PPPPVYSPPPPPPPVYSPPPPPPSPPPP--S 531
P YS ++P P PPPP PPPP YS PPPP P+YSPPPP P PP S
Sbjct: 445 PPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYS-PPPPSPIYSPPPPQVQPLPPTFS 503
Query: 532 PP 537
PP
Sbjct: 504 PP 505
Score = 60.1 bits (144), Expect = 1e-07
Identities = 36/69 (52%), Positives = 40/69 (57%), Gaps = 14/69 (20%)
Frame = +1
Query: 373 PNLYSHR*FLHAPQPA-PVFSPPPP-----PPPPVYSPPP----PPPPVYSPPPPPPSPP 522
P YS + P P+ P++SPPPP PPP YSPPP PPPP SPPPP SPP
Sbjct: 327 PPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPS-YSPPPPTYLPPPPPSSPPPPSFSPP 385
Query: 523 PP----SPP 537
PP SPP
Sbjct: 386 PPTYEQSPP 394
Score = 60.1 bits (144), Expect = 1e-07
Identities = 30/58 (51%), Positives = 34/58 (58%), Gaps = 15/58 (25%)
Frame = +1
Query: 409 PQPAPVFSPPPP---PPPPVYSPPP------PPPPVYSPPPP------PPSPPPPSPP 537
P P+P++SPPPP P PP +SPPP PPPP P PP PPSPP SPP
Sbjct: 482 PPPSPIYSPPPPQVQPLPPTFSPPPPRRIHLPPPPHRQPRPPTPTYGQPPSPPTFSPP 539
Score = 57.4 bits (137), Expect = 7e-07
Identities = 26/48 (54%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 403 HAPQPAPVFSPPPPPPPPVYSPPPP--PPPVYSPPPPPPSPPPPSPPS 540
H P P ++ PPP P +YSP P PPP YSPPPP P PSPPS
Sbjct: 175 HGHPPPPTYAQPPPTP--IYSPSPQVQPPPTYSPPPPTHVQPTPSPPS 220
Score = 54.7 bits (130), Expect = 4e-06
Identities = 23/41 (56%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +1
Query: 406 APQPAPVFSPPPP-----PPPPVYSPPPPPPPVYSPPPPPP 513
AP P + SPPPP PP P Y PP PP YSPP PPP
Sbjct: 572 APPPRQIHSPPPPHRQPRPPTPTYGQPPSPPTTYSPPSPPP 612
[243][TOP]
>UniRef100_Q97F93 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Clostridium
acetobutylicum RepID=Q97F93_CLOAB
Length = 174
Score = 82.4 bits (202), Expect = 2e-14
Identities = 48/145 (33%), Positives = 79/145 (54%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + +++R EE Y SID+V ++R++RK K K K + LKF
Sbjct: 50 VEVTIPFNGVILRGEETNNDMYASIDIVGDKLERQVRKQKTKL----ERRKYSDSLKFQN 105
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+ P EE+ E+V+TK F + P++ EA+ ++E++ H+F+ F
Sbjct: 106 I----------------PDYHKEEQE-PEIVKTKRFAIKPMSEEEAVLEMELLGHNFFVF 148
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
+N ++ E+N+VYKRK+G YGLI P+
Sbjct: 149 QNGDSNEVNVVYKRKDGNYGLIEPE 173
[244][TOP]
>UniRef100_C7XW84 Sigma 54 modulation protein/SSU ribosomal protein S30P n=1
Tax=Lactobacillus coleohominis 101-4-CHN
RepID=C7XW84_9LACO
Length = 179
Score = 82.4 bits (202), Expect = 2e-14
Identities = 49/146 (33%), Positives = 80/146 (54%)
Frame = -1
Query: 466 ESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 287
++ V V + + + +RAEE + Y SIDLV+ ++R++RK K K R KG L
Sbjct: 50 KTFKVEVTIPLPYLTLRAEETSNDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGLKNL 108
Query: 286 KFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 107
+F +P G E+D ++I VRTK + P+ EA+ Q++M+ HD
Sbjct: 109 EF----VPGDDGTEDDSLKI--------------VRTKEISLKPMDSEEAVLQMDMLGHD 150
Query: 106 FYAFRNEETGEINIVYKRKEGGYGLI 29
F+ F++ +T ++VY+R +G YGLI
Sbjct: 151 FFIFQDADTNGTSVVYRRNDGRYGLI 176
[245][TOP]
>UniRef100_C6Q126 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium carboxidivorans P7 RepID=C6Q126_9CLOT
Length = 175
Score = 82.4 bits (202), Expect = 2e-14
Identities = 51/145 (35%), Positives = 83/145 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
V V + I++R EE + Y SIDLV ++ ++RK K K + + LKF
Sbjct: 50 VEVTIPFNGIILRGEEENDDMYASIDLVVDKLEGQIRKQKTKL----QRRTHSDSLKFQ- 104
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
+P ++ P KD EE ++V+TK F + P++ EA+ Q+E++ H+F+ +
Sbjct: 105 -FIP----------DLEP-KDKEES---KIVKTKRFAIKPMSSEEAVLQMELLGHNFFVY 149
Query: 94 RNEETGEINIVYKRKEGGYGLIIPK 20
++ E GE+N+VYKRK+G YGLI P+
Sbjct: 150 KDAENGEVNVVYKRKDGNYGLIEPE 174
[246][TOP]
>UniRef100_C5NVZ2 Ribosome-associated factor Y n=1 Tax=Gemella haemolysans ATCC 10379
RepID=C5NVZ2_9BACL
Length = 181
Score = 82.4 bits (202), Expect = 2e-14
Identities = 48/142 (33%), Positives = 81/142 (57%)
Frame = -1
Query: 454 VVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 275
+ + V + + +RAEE E Y ++DLV ++R++RK K K GR KG F+E
Sbjct: 54 IEITVPLRGVTLRAEETNEDLYAAVDLVVDKLERQMRKHKTKINRKGRE-KG-----FAE 107
Query: 274 VILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 95
EI +T + ++ EE ++ + K + P+T EA+ Q+E++ HDF+AF
Sbjct: 108 ------------EIILTSELEEAEETTLDLGKVKQLKVEPMTREEAVFQMELLGHDFFAF 155
Query: 94 RNEETGEINIVYKRKEGGYGLI 29
+ T EI++VYKR++ GYG++
Sbjct: 156 LDNTTNEISVVYKRRDTGYGVL 177
[247][TOP]
>UniRef100_B7GE66 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7GE66_PHATR
Length = 209
Score = 82.4 bits (202), Expect = 2e-14
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 22/195 (11%)
Frame = -1
Query: 541 TRAVKVVVVKEVAAVVNKLVAEAAVESIPVV----------------VVVEVEKILVRAE 410
T A+ V K + +NKL + A++ V+ VV ++ +
Sbjct: 23 TPALVEHVNKRIGGQINKLASNGAIQECDVILSVSKNPKVKNGHRVEVVTNLKGTSIICH 82
Query: 409 EHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFSEVILPLPSGDEEDE 236
+ Y SID S + RKL K K+ HG G + ++ E + ED
Sbjct: 83 NESPDMYASIDAASHALYRKLCKYKDNRVAGWHGGEKMGNDIMEVLENL--------EDV 134
Query: 235 IEITPQKDDEEELIEE---VVRTKYFDMP-PLTVFEAIDQLEMVDHDFYAFRNEETGEIN 68
E T EE + E + + K FD+ P++V EA+ L+ +DHDFY FRN ET EI+
Sbjct: 135 SEYTATPVAEEYVDPEAPTITKVKNFDLTKPMSVQEAVFALDYIDHDFYVFRNAETNEIS 194
Query: 67 IVYKRKEGGYGLIIP 23
+VYKR GG GL+ P
Sbjct: 195 VVYKRHVGGIGLVEP 209
[248][TOP]
>UniRef100_P47995 Uncharacterized protein Sca_0400 n=1 Tax=Staphylococcus carnosus
subsp. carnosus TM300 RepID=Y400_STACT
Length = 188
Score = 82.4 bits (202), Expect = 2e-14
Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Frame = -1
Query: 472 AVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN 293
A S + V + + + +RAEE + Y IDL+++ ++R++RK K + N
Sbjct: 48 ANSSTKIEVTIPLNDVTLRAEERNDDLYAGIDLITNKLERQVRKYKTRV----------N 97
Query: 292 RLKFSEVIL-PLPSGDEED-EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 119
R K E P P+ E E + KDDE E+I R+K F + P+ EA+ Q+++
Sbjct: 98 RKKRKESEHEPFPATPETPPETAVDHDKDDEIEII----RSKQFSLKPMDSEEAVLQMDL 153
Query: 118 VDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
+ HDF+ F + ET +IVY+RK+G YGLI
Sbjct: 154 LGHDFFIFNDRETDGTSIVYRRKDGKYGLI 183
[249][TOP]
>UniRef100_Q9CHS8 Putative uncharacterized protein ygdA n=1 Tax=Lactococcus lactis
subsp. lactis RepID=Q9CHS8_LACLA
Length = 185
Score = 82.0 bits (201), Expect = 3e-14
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Frame = -1
Query: 511 EVAAVVN-KLVAEAAVESIPVVVVVEVEKILVRAEEHAETTYGSIDLVSSIIQRKLRKIK 335
EV A VN K+ +E + V V + + + +RAE+ ++ Y SID V ++R++RK K
Sbjct: 37 EVTAYVNLKVYSEKRAK---VEVTLPAKNVTLRAEDTSQDMYSSIDFVEEKLERQIRKYK 93
Query: 334 EKETDHGRHMKGPNRLKFSEVILPLPSGDEEDEIEITPQKDDEEELIEEVVRTKYFDMPP 155
+ R+ P F + PL DE E + ++VRTK+ + P
Sbjct: 94 TRMNRKPRNAV-PTGQAFGDEFAPLEKADEVAEDHV------------DIVRTKHVALKP 140
Query: 154 LTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGYGLI 29
+ EA+ Q++M+ HDFY F + ++ ++VY+R +G YGLI
Sbjct: 141 MDAEEAVLQMDMLGHDFYVFTDADSNGTHVVYRRTDGRYGLI 182
[250][TOP]
>UniRef100_A5VB72 Filamentous haemagglutinin family outer membrane protein n=1
Tax=Sphingomonas wittichii RW1 RepID=A5VB72_SPHWW
Length = 1531
Score = 82.0 bits (201), Expect = 3e-14
Identities = 34/45 (75%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
Frame = +1
Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPP--SPPPPSPP 537
P P PV PPPPPPPPV PPPPPPP SPPPPPP SPPPP PP
Sbjct: 1269 PPPPPVSPPPPPPPPPVSPPPPPPPPPVSPPPPPPPVSPPPPPPP 1313
Score = 75.5 bits (184), Expect = 2e-12
Identities = 31/39 (79%), Positives = 31/39 (79%)
Frame = +1
Query: 409 PQPAPVFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPP 525
P P P SPPPPPPPP SPPPPPPPV SPPPPPP PPP
Sbjct: 1279 PPPPPPVSPPPPPPPPPVSPPPPPPPV-SPPPPPPPPPP 1316
Score = 73.6 bits (179), Expect = 9e-12
Identities = 30/39 (76%), Positives = 30/39 (76%), Gaps = 4/39 (10%)
Frame = +1
Query: 433 PPPPPPPPVYSPPPPPPPVYSPPPPPP----SPPPPSPP 537
PPPPPPPPV PPPPPPP SPPPPPP SPPPP PP
Sbjct: 1266 PPPPPPPPVSPPPPPPPPPVSPPPPPPPPPVSPPPPPPP 1304
Score = 70.1 bits (170), Expect = 1e-10
Identities = 28/38 (73%), Positives = 28/38 (73%)
Frame = +1
Query: 424 VFSPPPPPPPPVYSPPPPPPPVYSPPPPPPSPPPPSPP 537
V PPPPPPPP SPPPPPPP PPPPP PPP SPP
Sbjct: 1262 VSPPPPPPPPPPVSPPPPPPPPPVSPPPPPPPPPVSPP 1299