BB933707 ( RCC06222 )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BB933707  RCC06222
         (616 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q1SN01 High mobility group proteins HMG-I and HMG-Y; L...   224   6e-57
UniRef100_Q93YH8 HMG I/Y like protein n=1 Tax=Glycine max RepID=...   191   4e-47
UniRef100_A9P7V9 High mobility group family n=1 Tax=Populus tric...   114   6e-24
UniRef100_A5BLU3 Putative uncharacterized protein n=1 Tax=Vitis ...   101   4e-20
UniRef100_B9T8C7 Histone h1/h5, putative n=1 Tax=Ricinus communi...    92   3e-17
UniRef100_Q40451 DNA-binding protein n=1 Tax=Nicotiana tabacum R...    74   7e-12
UniRef100_B9I2G1 High mobility group family n=1 Tax=Populus tric...    74   7e-12
UniRef100_Q43568 DNA-binding protein (Fragment) n=1 Tax=Nicotian...    72   5e-11
UniRef100_Q9ZRM3 HMR1 protein n=1 Tax=Antirrhinum majus RepID=Q9...    70   1e-10
UniRef100_Q9LSK7 Genomic DNA, chromosome 3, P1 clone: MBG14 n=1 ...    67   1e-09
UniRef100_A0T2P9 DNA binding protein n=1 Tax=Brassica rapa RepID...    59   4e-07
UniRef100_A7PH49 Chromosome chr17 scaffold_16, whole genome shot...    56   3e-06
UniRef100_Q9LP61 T1N15.25 n=1 Tax=Arabidopsis thaliana RepID=Q9L...    55   4e-06
UniRef100_Q4V3D1 At1g48620 n=1 Tax=Arabidopsis thaliana RepID=Q4...    55   4e-06
UniRef100_B6SD81 High mobility group protein A2 n=1 Tax=Physcomi...    54   8e-06
graphical overview:
alignment
UniRef100_Q1SN01 UniRef100_Q1SN01 UniRef100_Q93YH8 UniRef100_Q93YH8 UniRef100_A9P7V9 UniRef100_A9P7V9 UniRef100_A5BLU3 UniRef100_A5BLU3 UniRef100_B9T8C7 UniRef100_B9T8C7 UniRef100_Q40451 UniRef100_Q40451 UniRef100_B9I2G1 UniRef100_B9I2G1 UniRef100_Q43568 UniRef100_Q43568 UniRef100_Q9ZRM3 UniRef100_Q9ZRM3 UniRef100_Q9LSK7 UniRef100_Q9LSK7 UniRef100_A0T2P9 UniRef100_A0T2P9 UniRef100_A7PH49 UniRef100_A7PH49 UniRef100_Q9LP61 UniRef100_Q9LP61 UniRef100_Q4V3D1 UniRef100_Q4V3D1