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[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
RepID=UPI0000163E03
Length = 824
Score = 288 bits (736), Expect = 2e-76
Identities = 134/173 (77%), Positives = 152/173 (87%)
Frame = -2
Query: 522 VLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHV 343
VLDHMSG+DFKKFMHVSEQGNKAHFYT +LGV GPHYKP E DFIVSTEPLKMG+ GEHV
Sbjct: 556 VLDHMSGLDFKKFMHVSEQGNKAHFYTEMLGVAGPHYKPQENDFIVSTEPLKMGVCGEHV 615
Query: 342 PIKYGGGVGRLPTKNWVMSFGKSSSLKNVKGYLIYPLLREQLEAGKRIIFMSPAPYVANN 163
PI+YG GVG LPTK WV+ FG+ S LKN GYLI+P+LR Q+EAGKR++FMSPAPYVANN
Sbjct: 616 PIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANN 675
Query: 162 AALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFAS 4
AALIAFG+ K+L Q+DALVHYRN IPEST+GLEQYFDAP+P A +G FYFA+
Sbjct: 676 AALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYFAN 728
[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
RepID=POL1_BRSV
Length = 2264
Score = 288 bits (736), Expect = 2e-76
Identities = 134/173 (77%), Positives = 152/173 (87%)
Frame = -2
Query: 522 VLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHV 343
VLDHMSG+DFKKFMHVSEQGNKAHFYT +LGV GPHYKP E DFIVSTEPLKMG+ GEHV
Sbjct: 1996 VLDHMSGLDFKKFMHVSEQGNKAHFYTEMLGVAGPHYKPQENDFIVSTEPLKMGVCGEHV 2055
Query: 342 PIKYGGGVGRLPTKNWVMSFGKSSSLKNVKGYLIYPLLREQLEAGKRIIFMSPAPYVANN 163
PI+YG GVG LPTK WV+ FG+ S LKN GYLI+P+LR Q+EAGKR++FMSPAPYVANN
Sbjct: 2056 PIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANN 2115
Query: 162 AALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFAS 4
AALIAFG+ K+L Q+DALVHYRN IPEST+GLEQYFDAP+P A +G FYFA+
Sbjct: 2116 AALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYFAN 2168
[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
Length = 824
Score = 274 bits (701), Expect = 2e-72
Identities = 132/171 (77%), Positives = 147/171 (85%)
Frame = -2
Query: 522 VLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHV 343
VLDHMSGVDFK+FMH+SEQGNKAHFYT +LGV GPHYKP E DFIVS +PLK G+ GE+V
Sbjct: 556 VLDHMSGVDFKRFMHMSEQGNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYV 615
Query: 342 PIKYGGGVGRLPTKNWVMSFGKSSSLKNVKGYLIYPLLREQLEAGKRIIFMSPAPYVANN 163
PI +G G+G LPTK WV FGK S LKN KGYLI LLREQ+EAGKR+IFM PAPYVANN
Sbjct: 616 PIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANN 675
Query: 162 AALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYF 10
AALI+FGSA K+L Q+DAL HYRN IPEST+GLEQYFDAPIPQA+VG FYF
Sbjct: 676 AALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYF 726
[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
RepID=POL1_TBRVM
Length = 2266
Score = 274 bits (701), Expect = 2e-72
Identities = 132/171 (77%), Positives = 147/171 (85%)
Frame = -2
Query: 522 VLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHV 343
VLDHMSGVDFK+FMH+SEQGNKAHFYT +LGV GPHYKP E DFIVS +PLK G+ GE+V
Sbjct: 1998 VLDHMSGVDFKRFMHMSEQGNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYV 2057
Query: 342 PIKYGGGVGRLPTKNWVMSFGKSSSLKNVKGYLIYPLLREQLEAGKRIIFMSPAPYVANN 163
PI +G G+G LPTK WV FGK S LKN KGYLI LLREQ+EAGKR+IFM PAPYVANN
Sbjct: 2058 PIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANN 2117
Query: 162 AALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYF 10
AALI+FGSA K+L Q+DAL HYRN IPEST+GLEQYFDAPIPQA+VG FYF
Sbjct: 2118 AALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYF 2168
[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI00017F0C90
Length = 826
Score = 221 bits (564), Expect = 2e-56
Identities = 105/173 (60%), Positives = 131/173 (75%)
Frame = -2
Query: 522 VLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHV 343
+LD ++G +F +FM S +G+KAHFYT +LGVCGPHYKP E+DF+VST P+K G G H+
Sbjct: 555 ILDSLAGPEFPRFMRCSGEGDKAHFYTPILGVCGPHYKPKEQDFLVSTLPIKQGE-GVHI 613
Query: 342 PIKYGGGVGRLPTKNWVMSFGKSSSLKNVKGYLIYPLLREQLEAGKRIIFMSPAPYVANN 163
PIK GGGVG LPT WV +FG+ S LKN GY Y LL EQ+E GKR++FMS APYVA N
Sbjct: 614 PIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGN 673
Query: 162 AALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFAS 4
AALI+FGS+ K+L ++ L HYRN IPES GL YFDAP+P A +G+ YFA+
Sbjct: 674 AALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYFAN 726
[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=POL1_GCMV
Length = 2252
Score = 221 bits (564), Expect = 2e-56
Identities = 105/173 (60%), Positives = 131/173 (75%)
Frame = -2
Query: 522 VLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHV 343
+LD ++G +F +FM S +G+KAHFYT +LGVCGPHYKP E+DF+VST P+K G G H+
Sbjct: 1981 ILDSLAGPEFPRFMRCSGEGDKAHFYTPILGVCGPHYKPKEQDFLVSTLPIKQGE-GVHI 2039
Query: 342 PIKYGGGVGRLPTKNWVMSFGKSSSLKNVKGYLIYPLLREQLEAGKRIIFMSPAPYVANN 163
PIK GGGVG LPT WV +FG+ S LKN GY Y LL EQ+E GKR++FMS APYVA N
Sbjct: 2040 PIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGN 2099
Query: 162 AALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFAS 4
AALI+FGS+ K+L ++ L HYRN IPES GL YFDAP+P A +G+ YFA+
Sbjct: 2100 AALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYFAN 2152
[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=UPI00003FE52F
Length = 846
Score = 169 bits (428), Expect = 1e-40
Identities = 88/168 (52%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Frame = -2
Query: 504 GVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGG 325
G +F +FMH S+ GN+ HF L V GP YKP + +VST PLK G G VP++ G
Sbjct: 569 GQEFARFMHTSDIGNQVHFTRQCLVVAGPFYKPTPDQLLVSTTPLKQGESGYWVPVETGM 628
Query: 324 GVGRLPTKNWVMSFGKSSSLKNVKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAF 145
G+G LPT WV F + + L + GY I+ +R +E+GK ++F S APYVA NAAL+AF
Sbjct: 629 GIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAF 688
Query: 144 GSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANV-GQFYFAS 4
G A KLL + AL YRN IPEST GLEQYFDA IPQA++ G FY A+
Sbjct: 689 GQAAKLLEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFYLAN 736
[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=POL1_CNSV
Length = 2336
Score = 169 bits (428), Expect = 1e-40
Identities = 88/168 (52%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Frame = -2
Query: 504 GVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGG 325
G +F +FMH S+ GN+ HF L V GP YKP + +VST PLK G G VP++ G
Sbjct: 2059 GQEFARFMHTSDIGNQVHFTRQCLVVAGPFYKPTPDQLLVSTTPLKQGESGYWVPVETGM 2118
Query: 324 GVGRLPTKNWVMSFGKSSSLKNVKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAF 145
G+G LPT WV F + + L + GY I+ +R +E+GK ++F S APYVA NAAL+AF
Sbjct: 2119 GIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAF 2178
Query: 144 GSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANV-GQFYFAS 4
G A KLL + AL YRN IPEST GLEQYFDA IPQA++ G FY A+
Sbjct: 2179 GQAAKLLEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFYLAN 2226
[9][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID54_9SECO
Length = 1916
Score = 80.9 bits (198), Expect = 5e-14
Identities = 48/132 (36%), Positives = 77/132 (58%), Gaps = 4/132 (3%)
Frame = -2
Query: 435 LGVCGPHY--KPCEEDFIVSTEPLKMG--ILGEHVPIKYGGGVGRLPTKNWVMSFGKSSS 268
+ V GP + + C++ F+VST PL G H+P++ G G+GR+P+++WV F +
Sbjct: 1766 IAVSGPKWIIESCDKQFVVSTLPLSRAEKFSGIHIPVECGDGLGRMPSQDWVRRFRR--- 1822
Query: 267 LKNVKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNC 88
+++V+ +IY + AGK IIF APY+A A I+F A + + RD L Y N
Sbjct: 1823 IRHVQIRVIY----DAYAAGKTIIFKDVAPYIAGWTAAISFACA-QQYSYRDMLNRYNNV 1877
Query: 87 IPESTTGLEQYF 52
+++G+EQYF
Sbjct: 1878 CTPNSSGIEQYF 1889
[10][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
RepID=UPI0000163DCE
Length = 707
Score = 57.8 bits (138), Expect = 5e-07
Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Frame = -2
Query: 429 VCGPHY--KPCEEDFIVSTEPLKMGILGE--HVPIKYG-GGVGRLPTKNWVMSFGKSSSL 265
+CGP + E F+VST PL+ G H I+Y GVGRLP+++WV F S+
Sbjct: 563 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSA-- 620
Query: 264 KNVKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCI 85
+ + +R+ +GK I F PYVAN A I F + Y++ I
Sbjct: 621 -----HRVTAEIRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 667
Query: 84 PESTTGLEQYFDAPIPQANVGQFYF 10
Y D +P ++ FYF
Sbjct: 668 -------NLYHDVSVPGSDALYFYF 685
[11][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
RepID=POL1_BRAV
Length = 2094
Score = 57.8 bits (138), Expect = 5e-07
Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Frame = -2
Query: 429 VCGPHY--KPCEEDFIVSTEPLKMGILGE--HVPIKYG-GGVGRLPTKNWVMSFGKSSSL 265
+CGP + E F+VST PL+ G H I+Y GVGRLP+++WV F S+
Sbjct: 1950 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSA-- 2007
Query: 264 KNVKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCI 85
+ + +R+ +GK I F PYVAN A I F + Y++ I
Sbjct: 2008 -----HRVTAEIRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 2054
Query: 84 PESTTGLEQYFDAPIPQANVGQFYF 10
Y D +P ++ FYF
Sbjct: 2055 -------NLYHDVSVPGSDALYFYF 2072