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[1][TOP] >UniRef100_Q1SN01 High mobility group proteins HMG-I and HMG-Y; Linker histone, N-terminal n=1 Tax=Medicago truncatula RepID=Q1SN01_MEDTR Length = 422 Score = 121 bits (304), Expect = 2e-26 Identities = 77/131 (58%), Positives = 83/131 (63%), Gaps = 1/131 (0%) Frame = +1 Query: 1 RGRPPKPKPQQQQQQQNVLFVSLDTTTATATVPPPPTTTTTTVDPVRRRGRGRPPGTFRS 180 RGRPPK KP Q V FVSLD PPPPTT V V+R GRGRPPGTFRS Sbjct: 124 RGRPPKHKPILIPNAQPV-FVSLD--------PPPPTTAVEPVLSVKR-GRGRPPGTFRS 173 Query: 181 KTLKSPGRPPKPKSVSNAGFKRRPGRPPKIQSQQPTVIPFAASILPDHHQPTLS-SARST 357 K++K KPKSVSN G KRRPGRPPK QS TVIPFAA+ P + S RST Sbjct: 174 KSIK------KPKSVSN-GLKRRPGRPPKTQSHPTTVIPFAAAPAPSVVSDEANVSVRST 226 Query: 358 RPRGRPNKYAD 390 RPRGRP KY+D Sbjct: 227 RPRGRPKKYSD 237 [2][TOP] >UniRef100_Q93YH8 HMG I/Y like protein n=1 Tax=Glycine max RepID=Q93YH8_SOYBN Length = 413 Score = 89.0 bits (219), Expect = 2e-16 Identities = 64/142 (45%), Positives = 75/142 (52%), Gaps = 15/142 (10%) Frame = +1 Query: 1 RGRPPKPKPQQQQQQQNVLFVSLDTTTATATVPPPPTTTTTTVDPVRRRG-------RGR 159 RGRPPK K Q + ++L+ A + P PV RGR Sbjct: 115 RGRPPKLK-SQPNTELTWPALALNDNPALQSAKRGPGRPKKIAGPVGVSPGPMVPGRRGR 173 Query: 160 PPGTFRSKTLKSPGRPPKPKSVS--NAGFKRRPGRPPKIQSQQPTVIPFAASILP--DHH 327 PPGT RSK K PGRPPKPKSVS ++G KRRPGRPPK +S VIPFAA + P Sbjct: 174 PPGTGRSKLPKRPGRPPKPKSVSAISSGLKRRPGRPPKAES-NVNVIPFAAPVAPGLPTV 232 Query: 328 QPTLSSAR----STRPRGRPNK 381 QP + +A S RPRGRP K Sbjct: 233 QPIVPTASVPNGSPRPRGRPKK 254 [3][TOP] >UniRef100_B9I2G1 High mobility group family n=1 Tax=Populus trichocarpa RepID=B9I2G1_POPTR Length = 369 Score = 67.8 bits (164), Expect = 4e-10 Identities = 56/160 (35%), Positives = 71/160 (44%), Gaps = 31/160 (19%) Frame = +1 Query: 1 RGRPPKPK----------------PQQ--------QQQQQNVLFVSL------DTTTATA 90 RGRPPK K PQ Q Q+ L VS T+T Sbjct: 159 RGRPPKTKANGLPPTPASVLANGQPQTGLGSHVSVTAQTQSQLVVSSVGTPVDSTSTGRK 218 Query: 91 TVPPPPTTTTTTVDP-VRRRGRGRPPGTFRSKTLKSPGRPPKPKSVSNAGFKRRPGRPPK 267 P T P V ++GRGRPP + + KSPGRP KPKS+ G K+ PGRPPK Sbjct: 219 GRGRPKKMVVTEAGPLVVKKGRGRPPNSGPLGSKKSPGRPRKPKSL--VGAKKGPGRPPK 276 Query: 268 IQSQQPTVIPFAASILPDHHQPTLSSARSTRPRGRPNKYA 387 Q +P +P+A + + + S +PRGRP K A Sbjct: 277 NQ-LKPVTVPYAVASPTATDAAAVFNVASPKPRGRPRKGA 315 [4][TOP] >UniRef100_A9P7V9 High mobility group family n=1 Tax=Populus trichocarpa RepID=A9P7V9_POPTR Length = 478 Score = 67.8 bits (164), Expect = 4e-10 Identities = 58/160 (36%), Positives = 73/160 (45%), Gaps = 31/160 (19%) Frame = +1 Query: 1 RGRPPKPKPQ----------QQQQQQNVLFVSLDTTTATATVPPPPTTTTTTVDPVRRR- 147 RGRPPK K Q Q L +++ T +V P T++TV R R Sbjct: 156 RGRPPKAKLNGLTPTPAPVLANGQAQTGLGLNVGVTAQPLSVGFPIDPTSSTVKKGRGRP 215 Query: 148 ---------------GRGRPPGTFRSKTLKSPGRPPKPKSVSNAGFKRRPGRPPKIQSQQ 282 G+GRPP T + KSPGRP KPKS+ +A K+ PGRPPK Q + Sbjct: 216 KKVAVTEAGPLAVNKGKGRPPKTGPLGSKKSPGRPRKPKSLVDA--KKGPGRPPKNQLKP 273 Query: 283 PTV-----IPFAASILPDHHQPTLSSARSTRPRGRPNKYA 387 TV P A +I D + + S RPRGRP K A Sbjct: 274 VTVPYAVAAPTATAIATD--AAAMFNVGSPRPRGRPRKGA 311 [5][TOP] >UniRef100_B9T8C7 Histone h1/h5, putative n=1 Tax=Ricinus communis RepID=B9T8C7_RICCO Length = 435 Score = 63.9 bits (154), Expect = 5e-09 Identities = 52/156 (33%), Positives = 65/156 (41%), Gaps = 27/156 (17%) Frame = +1 Query: 1 RGRPPKPKPQ------QQQQQQNVLFVSLDTTTATATVPPPPTTTTTTVDPVR------- 141 RGRPPKPKP+ Q Q N V + + +T P T + P Sbjct: 178 RGRPPKPKPEVVPSSIQPISQPNAASVMVPVGLSISTQPINSAPAATVIQPPNVGQPQMG 237 Query: 142 -RRGRGRPP-------------GTFRSKTLKSPGRPPKPKSVSNAGFKRRPGRPPKIQSQ 279 +RGRGRP G R + KS GRP K KSV G K+ P R PK Sbjct: 238 VKRGRGRPKKVAGGGAAAAVLGGKRRGRPPKSAGRPKKLKSVGANGVKKGPKRLPK---- 293 Query: 280 QPTVIPFAASILPDHHQPTLSSARSTRPRGRPNKYA 387 V+P+A ++A + RPRGRP K A Sbjct: 294 -SVVVPYATG---------AAAAVTARPRGRPKKGA 319 [6][TOP] >UniRef100_A5BLU3 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BLU3_VITVI Length = 355 Score = 56.2 bits (134), Expect = 1e-06 Identities = 53/131 (40%), Positives = 61/131 (46%), Gaps = 4/131 (3%) Frame = +1 Query: 1 RGRPPKPKPQQQQQQQNVLFVSLDTTTATATVPPPPTTTTTTVDPVRRRGRGRPPGTFRS 180 RGRPPKPK Q ++VL A V P V +RG GRPP Sbjct: 131 RGRPPKPKIPVQPTSESVL-------VAVGLVDGPV---------VPKRGPGRPP----- 169 Query: 181 KTLKSPG-RPPKPKSVSNAGFKRRPGRPPKIQSQQPTVIPFAASILPDHHQPTLSSAR-- 351 KS G R P+PKS+ G KRRPGRPPK +Q VIP +P T + Sbjct: 170 ---KSGGVRGPRPKSLD--GPKRRPGRPPK--AQLGGVIPGG---VPRERPRTAGVTKVK 219 Query: 352 -STRPRGRPNK 381 S RPRGRP K Sbjct: 220 VSGRPRGRPPK 230 [7][TOP] >UniRef100_Q9LSK7 Genomic DNA, chromosome 3, P1 clone: MBG14 n=1 Tax=Arabidopsis thaliana RepID=Q9LSK7_ARATH Length = 480 Score = 53.5 bits (127), Expect = 7e-06 Identities = 45/147 (30%), Positives = 60/147 (40%), Gaps = 12/147 (8%) Frame = +1 Query: 1 RGRPPKPKPQQQQQQQNVLFVSLDTTTATATVPP--------PPTTTTTTVDPVRRRGRG 156 RGRPPKPKP+ Q Q L T A P P T V +RG G Sbjct: 181 RGRPPKPKPESQPQPLQQL---PPTNQVQANGQPIWEQQQVQSPVPVPTPVTESAKRGPG 237 Query: 157 RPPGTFRSKTLKSPGRPPKPKSVSNAGFKRRPGRPPKIQS----QQPTVIPFAASILPDH 324 RP R +P P ++ AG +R GRPP ++ ++P + AS+ P Sbjct: 238 RP----RKNGSAAPATAPIVQASVMAGIMKRRGRPPGRRAAGRQRKPKSVSSTASVYP-- 291 Query: 325 HQPTLSSARSTRPRGRPNKYADDDALV 405 A R RGRP + D ++V Sbjct: 292 -----YVANGARRRGRPRRVVDPSSIV 313