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[1][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T7E3_SOYBN
Length = 291
Score = 297 bits (760), Expect = 5e-79
Identities = 154/192 (80%), Positives = 169/192 (88%)
Frame = -1
Query: 578 SISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGG 399
S MSWDGPLSSVKL IQG+N+EL+DAVKQHVEDKVG+ +QKHS+LVREVDVRLS RGGG
Sbjct: 58 SAHMSWDGPLSSVKLTIQGKNLELTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGG 117
Query: 398 EFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 219
EFGRGPRTRRCEVTL+TKRHGVVRAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGRH
Sbjct: 118 EFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRH 177
Query: 218 MKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQ 39
MKG NRLK E + LP EEDEI ++PQ +EEE I+EVVRTKYFDMPPLTV EAI+Q
Sbjct: 178 MKGFNRLKVREPVEQLPV--EEDEI-LSPQ--EEEESIDEVVRTKYFDMPPLTVAEAIEQ 232
Query: 38 LEMVDHDFYAFR 3
LE VDHDFY FR
Sbjct: 233 LENVDHDFYGFR 244
[2][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984F94
Length = 298
Score = 278 bits (711), Expect = 2e-73
Identities = 138/200 (69%), Positives = 168/200 (84%)
Frame = -1
Query: 602 TTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDV 423
TT++ ++ MSWDGPLSSVKLI+QG+N+EL+D V+ HVE+KVG+ +QKHS+LVREVDV
Sbjct: 58 TTRQTKPLAVRMSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDV 117
Query: 422 RLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 243
RLS RGG E G+GP+ RRCEVTL+TK+HGVVRAEEHAET YGSID+VSSIIQRKLRKIKE
Sbjct: 118 RLSIRGG-ELGKGPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKE 176
Query: 242 KETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPL 63
K++DHGRHMKG NRLK + PL E+E ++ PQK+D +LI E+VRTKYFDMPPL
Sbjct: 177 KDSDHGRHMKGFNRLKVRDPETPL----VEEEADVVPQKED-GDLINEIVRTKYFDMPPL 231
Query: 62 TVFEAIDQLEMVDHDFYAFR 3
TV EA++QLE VDHDF+ FR
Sbjct: 232 TVPEAVEQLENVDHDFFGFR 251
[3][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
Length = 306
Score = 277 bits (708), Expect = 5e-73
Identities = 144/200 (72%), Positives = 162/200 (81%)
Frame = -1
Query: 602 TTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDV 423
T G S+ MSWDGPL SVKLIIQG+N+EL+D VK+HVEDKVG+ +QKHS+LVREVDV
Sbjct: 66 TPLTHGGCSVKMSWDGPLHSVKLIIQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDV 125
Query: 422 RLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 243
RLS RGG E G+GPR RRCEVTL+T RHGVVRAEE AET Y SIDLVSSIIQRKLRKIKE
Sbjct: 126 RLSVRGG-ELGKGPRIRRCEVTLFTNRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKE 184
Query: 242 KETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPL 63
KE+DHGRHMKG NRLK E P+P E D E++ Q + E+ IEEVVRTK+FDMPPL
Sbjct: 185 KESDHGRHMKGFNRLKVRE---PVPQVVEGDADEVSQQ--EVEDSIEEVVRTKFFDMPPL 239
Query: 62 TVFEAIDQLEMVDHDFYAFR 3
TV EAI+QLE VDHDFY FR
Sbjct: 240 TVSEAIEQLENVDHDFYGFR 259
[4][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QEV5_VITVI
Length = 230
Score = 274 bits (700), Expect = 5e-72
Identities = 136/189 (71%), Positives = 162/189 (85%)
Frame = -1
Query: 569 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 390
MSWDGPLSSVKLI+QG+N+EL+D V+ HVE+KVG+ +QKHS+LVREVDVRLS RGG E G
Sbjct: 1 MSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGG-ELG 59
Query: 389 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 210
+GP+ RRCEVTL+TK+HGVVRAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG
Sbjct: 60 KGPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKG 119
Query: 209 PNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 30
NRLK + PL E+E ++ PQK+D +LI E+VRTKYFDMPPLTV EA++QLE
Sbjct: 120 FNRLKVRDPETPL----VEEEADVVPQKED-GDLINEIVRTKYFDMPPLTVPEAVEQLEN 174
Query: 29 VDHDFYAFR 3
VDHDF+ FR
Sbjct: 175 VDHDFFGFR 183
[5][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SEK8_RICCO
Length = 311
Score = 273 bits (699), Expect = 6e-72
Identities = 138/198 (69%), Positives = 166/198 (83%)
Frame = -1
Query: 596 KRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRL 417
KR +++ MSW+GPLSSVKLI QG+N+EL+D VK+HVEDKVG+ +QKHS+LVREVDVRL
Sbjct: 70 KRGRRSAVRMSWEGPLSSVKLITQGKNLELTDTVKKHVEDKVGKAVQKHSHLVREVDVRL 129
Query: 416 STRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 237
S RGG EFG+GP+ RRCEVTL+TK+HGV+RAEE AET Y SIDLVSSIIQRKLRKIKEK
Sbjct: 130 SVRGG-EFGKGPKIRRCEVTLFTKKHGVIRAEEDAETIYASIDLVSSIIQRKLRKIKEKV 188
Query: 236 TDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTV 57
+DHGRHMKG NRLK E + P +D+ DE++ D++E+ I+EVVRTKYFDMPPLTV
Sbjct: 189 SDHGRHMKGFNRLKVREPVAE-PVKDDTDEVD-GVLGDEDEDYIDEVVRTKYFDMPPLTV 246
Query: 56 FEAIDQLEMVDHDFYAFR 3
EAI+QL+ VDHDFY FR
Sbjct: 247 SEAIEQLKNVDHDFYGFR 264
[6][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PHY3_POPTR
Length = 306
Score = 273 bits (697), Expect = 1e-71
Identities = 140/195 (71%), Positives = 162/195 (83%)
Frame = -1
Query: 587 GAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTR 408
G +SI MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS R
Sbjct: 70 GGSSIRMSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVR 129
Query: 407 GGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 228
GG E G+GPR RRCEVTL+TKRHGVVRAEE AET + SIDLVSSIIQRKLRKIK+KE+DH
Sbjct: 130 GG-ELGKGPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDH 188
Query: 227 GRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEA 48
GRHMKG NRLK E + + ED+ DE+ + ++E+ IEEVVRTKYFDMPPLTV EA
Sbjct: 189 GRHMKGFNRLKVREPMHQVVVEDDADEV----SQQEDEDYIEEVVRTKYFDMPPLTVSEA 244
Query: 47 IDQLEMVDHDFYAFR 3
I+QLE V HDFY FR
Sbjct: 245 IEQLEHVHHDFYGFR 259
[7][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
thaliana RepID=Q9FLV3_ARATH
Length = 365
Score = 271 bits (692), Expect = 4e-71
Identities = 132/197 (67%), Positives = 167/197 (84%), Gaps = 1/197 (0%)
Frame = -1
Query: 590 RGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLST 411
R + ++ MSWDGPL+SVKLIIQG+N+ELS+ +KQHVE+KVG+ +QKHS+LVREVDVRLS
Sbjct: 123 RSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSV 182
Query: 410 RGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 231
RGG EFG+GPR RRCEVTL+TK+HGVVRAEE AET Y IDLVS+IIQRKLRKIKEK++D
Sbjct: 183 RGG-EFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSD 241
Query: 230 HGRHMKGPNRLKFSEVILPLPSEDEEDEIEIT-PQKDDEEELIEEVVRTKYFDMPPLTVF 54
HGRHMKG NRLK E ++ ED ED + + ++++E++LI+E+VRTK F+MPPLTV
Sbjct: 242 HGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVA 301
Query: 53 EAIDQLEMVDHDFYAFR 3
EA++QLE+V HDFY F+
Sbjct: 302 EAVEQLELVSHDFYGFQ 318
[8][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
Length = 231
Score = 267 bits (683), Expect = 4e-70
Identities = 137/189 (72%), Positives = 158/189 (83%)
Frame = -1
Query: 569 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 390
MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS RGG E G
Sbjct: 1 MSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELG 59
Query: 389 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 210
+GPR RRCEVTL+TKRHGVVRAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG
Sbjct: 60 KGPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKG 119
Query: 209 PNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 30
NRLK E + + ED+ DE+ + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE
Sbjct: 120 FNRLKVREPMHQVVVEDDADEV----SQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEH 175
Query: 29 VDHDFYAFR 3
V HDFY FR
Sbjct: 176 VHHDFYGFR 184
[9][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RR30_SPIOL
Length = 302
Score = 255 bits (652), Expect = 2e-66
Identities = 130/194 (67%), Positives = 155/194 (79%), Gaps = 3/194 (1%)
Frame = -1
Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGE 396
+ MSWDGPLSSVKLI+QGRN+E+SD V+ HVEDKVG+ + KHS+LVREVDVRLS RGG +
Sbjct: 64 VCMSWDGPLSSVKLILQGRNLEVSDNVRSHVEDKVGKSVAKHSHLVREVDVRLSARGG-D 122
Query: 395 FGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM 216
+GP+ RRCEVTL+TKRHGV+RAEE AE+ Y SIDLVSSIIQRKLRKIK+K +DHGRHM
Sbjct: 123 LSKGPKLRRCEVTLFTKRHGVIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHM 182
Query: 215 KGPNRLKFSE---VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAI 45
KG NR K + V + EE E P ++++ IEEVVRTKYFDMPPLT+ EA+
Sbjct: 183 KGFNRSKVRDPEPVRITREEVLEEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAV 242
Query: 44 DQLEMVDHDFYAFR 3
+QLE VDHDFYAFR
Sbjct: 243 EQLENVDHDFYAFR 256
[10][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
RepID=C9EFD1_SOLTU
Length = 280
Score = 250 bits (638), Expect = 7e-65
Identities = 127/196 (64%), Positives = 157/196 (80%), Gaps = 5/196 (2%)
Frame = -1
Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGE 396
+ MSWDGPLSSVKLI+QG+N+EL+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E
Sbjct: 46 VRMSWDGPLSSVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-E 104
Query: 395 FGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM 216
G+GP+ RRCEVTL+TK+HGV+RAEE AE+ YGSID+VSSIIQRKLRKIKEK++DHGRHM
Sbjct: 105 LGKGPKIRRCEVTLFTKKHGVIRAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHM 164
Query: 215 KGPNRLKFSEVILPLPSED-----EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFE 51
KG +RLK + + L ED +E+E+E D + + EVVR K FDMPPL+V E
Sbjct: 165 KGFDRLKVRDPEVLLVQEDLETLPQEEEVE---DDDKSDGFVTEVVRKKSFDMPPLSVNE 221
Query: 50 AIDQLEMVDHDFYAFR 3
AI+QLE VDHDFY FR
Sbjct: 222 AIEQLENVDHDFYGFR 237
[11][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
RepID=Q672Q2_SOLLC
Length = 311
Score = 244 bits (623), Expect = 4e-63
Identities = 125/196 (63%), Positives = 154/196 (78%), Gaps = 5/196 (2%)
Frame = -1
Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGE 396
+ MSWDGPLSSVKLI+QG+N+EL+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E
Sbjct: 74 VRMSWDGPLSSVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-E 132
Query: 395 FGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM 216
G+GP+ RRCEVTL+TK+HGV+RAEE E+ YGSID+VSSIIQRKLRKIKEK++D GRHM
Sbjct: 133 LGKGPKIRRCEVTLFTKKHGVIRAEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHM 192
Query: 215 KGPNRLKFSEVILPLPSED-----EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFE 51
KG +RLK + L ED +E+E+E D + + EVVR K FDMPPL+V E
Sbjct: 193 KGFDRLKVRDPEALLVQEDLETLSQEEEVE----DDKSDGFVTEVVRKKSFDMPPLSVNE 248
Query: 50 AIDQLEMVDHDFYAFR 3
AI+QLE VDHDFY FR
Sbjct: 249 AIEQLENVDHDFYGFR 264
[12][TOP]
>UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TFU4_SOYBN
Length = 208
Score = 232 bits (591), Expect = 2e-59
Identities = 119/163 (73%), Positives = 138/163 (84%)
Frame = -1
Query: 608 TTTTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV 429
T+T+ R + S MSWDGPLSSVKLIIQG+N+EL+DAVK+HVEDKVG+ +QKHS+LVREV
Sbjct: 48 TSTSNRGRSLSTRMSWDGPLSSVKLIIQGKNLELTDAVKRHVEDKVGKAVQKHSHLVREV 107
Query: 428 DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKI 249
DVRLS RGGGEFGRGPRTRRCEVTL+TKRHGVVRAEE AE+TYGSIDLVSSIIQRKLRKI
Sbjct: 108 DVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKI 167
Query: 248 KEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDD 120
KEK +DHGRHMKG NRLK P DEI ++P++++
Sbjct: 168 KEKVSDHGRHMKGFNRLKLGS---PWSITYGRDEI-LSPREEE 206
[13][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
bicolor RepID=C5WRX8_SORBI
Length = 310
Score = 231 bits (588), Expect = 5e-59
Identities = 119/200 (59%), Positives = 155/200 (77%), Gaps = 2/200 (1%)
Frame = -1
Query: 596 KRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRL 417
+RR + S+ M+WDGPLSSV+LI+QGRN++LSD +K+H+EDKVGR + KH +LVREVDVRL
Sbjct: 54 RRRVSFSVRMAWDGPLSSVRLIMQGRNVKLSDKLKEHIEDKVGRAVSKHCHLVREVDVRL 113
Query: 416 STRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 237
S R GGE GRGP+T RCE+TL++KRHGV+RAEE AE+TY SIDL ++II+RKLRKIKEKE
Sbjct: 114 SAR-GGELGRGPKTSRCEITLFSKRHGVLRAEEDAESTYASIDLAAAIIKRKLRKIKEKE 172
Query: 236 TDHGRHMKGPNRLKFSEVILPLPSED--EEDEIEITPQKDDEEELIEEVVRTKYFDMPPL 63
T+ R G + E LPL +D E DE+ +DE+ ++ +VVRTK F+MPPL
Sbjct: 173 TEVRRDGDGGAGGAWEEE-LPLLDDDLVEADELAAAVGAEDEQTVVAKVVRTKVFEMPPL 231
Query: 62 TVFEAIDQLEMVDHDFYAFR 3
TV EA++QL+ V H+FY FR
Sbjct: 232 TVEEALEQLDNVGHNFYCFR 251
[14][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
RepID=B6TYP8_MAIZE
Length = 309
Score = 231 bits (588), Expect = 5e-59
Identities = 120/202 (59%), Positives = 154/202 (76%), Gaps = 2/202 (0%)
Frame = -1
Query: 602 TTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDV 423
T +RR + S+ M+WDGPLSSV+LI+Q RN +LS+ +K+H+EDKVGR + KH +LVREVDV
Sbjct: 52 TRRRRVSVSVRMAWDGPLSSVRLIMQSRNAKLSEKLKEHIEDKVGRAVSKHCHLVREVDV 111
Query: 422 RLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 243
RLS RGG E GRGP+T RCE+TL+TKRHGV+RAEE AE+TY SIDL ++I++RKLRKIKE
Sbjct: 112 RLSARGG-ELGRGPKTSRCEITLFTKRHGVLRAEEDAESTYASIDLAAAIVKRKLRKIKE 170
Query: 242 KETDHGRHMKGPNRLKFSEVILP--LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMP 69
KET+ R G + + I P L E D++E +DEE ++ +VVRTK F+MP
Sbjct: 171 KETEVRR---GGDADGVWDEIPPADLLPPAEADDLEAAVGAEDEETVLAKVVRTKVFEMP 227
Query: 68 PLTVFEAIDQLEMVDHDFYAFR 3
PLTV EA++QLE VDHDFY FR
Sbjct: 228 PLTVEEALEQLENVDHDFYCFR 249
[15][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
Length = 309
Score = 225 bits (573), Expect = 2e-57
Identities = 118/204 (57%), Positives = 155/204 (75%), Gaps = 5/204 (2%)
Frame = -1
Query: 599 TKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 420
++R A S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR
Sbjct: 62 SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121
Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240
LS RGG E RGP+ RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK
Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180
Query: 239 ETDHGRHMKG--PNRLKFSEVILPLPSEDEE---DEIEITPQKDDEEELIEEVVRTKYFD 75
ETD RH+KG P + +L +D + ++E +DE+ ++ +VVRTK F+
Sbjct: 181 ETD-VRHLKGTKPPVSDWPPSLLDNNDDDAQAQLKDLEEAVGAEDEDTVLTKVVRTKVFE 239
Query: 74 MPPLTVFEAIDQLEMVDHDFYAFR 3
MPPL+V EA++QL VDH+FYAFR
Sbjct: 240 MPPLSVEEAMEQLVNVDHNFYAFR 263
[16][TOP]
>UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJW3_9ROSI
Length = 268
Score = 219 bits (558), Expect = 1e-55
Identities = 116/164 (70%), Positives = 134/164 (81%)
Frame = -1
Query: 587 GAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTR 408
G +SI MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS R
Sbjct: 70 GGSSIRMSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVR 129
Query: 407 GGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 228
GG E G+GPR RRCEVTL+TKRHGVVRAEE AET Y SIDL SSIIQRKLRKIK+KE+DH
Sbjct: 130 GG-ELGKGPRIRRCEVTLFTKRHGVVRAEEDAETIYASIDLASSIIQRKLRKIKDKESDH 188
Query: 227 GRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEV 96
GRHMKG NRLK E P+ E+D E++ Q+D E+ IEEV
Sbjct: 189 GRHMKGFNRLKVRE---PMHQVVEDDADEVSQQED--EDYIEEV 227
[17][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LMC5_PICSI
Length = 321
Score = 218 bits (555), Expect = 3e-55
Identities = 118/207 (57%), Positives = 152/207 (73%), Gaps = 8/207 (3%)
Frame = -1
Query: 599 TKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 420
T RG + ++ W GPLSSV+LIIQG+N +L+DAVK ++E+KVG +QKH+ LVREVDVR
Sbjct: 70 TSSRGQINCTL-WSGPLSSVRLIIQGKNFQLTDAVKAYIEEKVGIAVQKHANLVREVDVR 128
Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240
LS RGG E G+GP+ RRCEVTL+TK+HGVVRAEE AET Y SID+VS II+RKLRKIKEK
Sbjct: 129 LSIRGG-EVGKGPKIRRCEVTLFTKKHGVVRAEEEAETIYASIDIVSDIIRRKLRKIKEK 187
Query: 239 ETDHGRHMKGPNRLKFSEVILPLPSEDEED-EIEITPQKDDEE-------ELIEEVVRTK 84
+ HGR K + K E++ + + +E + E+ D EE +L +EVVRTK
Sbjct: 188 DGGHGRPSKMRKQPKLGELLSTVVMDVKETRDKELDDLADVEEMRYEKIDDLSDEVVRTK 247
Query: 83 YFDMPPLTVFEAIDQLEMVDHDFYAFR 3
YF+MPP++ EA++QL VDHDFYAFR
Sbjct: 248 YFEMPPMSPEEALEQLMNVDHDFYAFR 274
[18][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
RepID=C6YXL0_ORYSJ
Length = 321
Score = 212 bits (540), Expect = 2e-53
Identities = 113/202 (55%), Positives = 149/202 (73%), Gaps = 5/202 (2%)
Frame = -1
Query: 599 TKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 420
++R A S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR
Sbjct: 62 SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121
Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240
LS RGG E RGP+ RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK
Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180
Query: 239 ETDHGRHMKG--PNRLKFSEVILPLPSEDEE---DEIEITPQKDDEEELIEEVVRTKYFD 75
ETD RH+KG P + +L +D + ++E +DE+ ++ VVRTK F+
Sbjct: 181 ETD-VRHLKGTKPPVSDWPPSLLDNNDDDAQAQLKDLEEAVGAEDEDTVLTRVVRTKVFE 239
Query: 74 MPPLTVFEAIDQLEMVDHDFYA 9
MPPL+ EA++QL DH F+A
Sbjct: 240 MPPLSGEEAMEQLGNGDHTFHA 261
[19][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TA00_PHYPA
Length = 297
Score = 197 bits (500), Expect = 7e-49
Identities = 107/197 (54%), Positives = 140/197 (71%)
Frame = -1
Query: 593 RRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS 414
++G + M+W G L+ V+L+IQG+++EL+DA+KQ+VE+KVG + S LV+EVDVR+S
Sbjct: 71 QKGRVTTCMAWGGTLAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMS 130
Query: 413 TRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 234
RGG E GRG R +RCEVTL+TK+HGVVRAEE AE+ Y SID VS +I RKLRKIKEK+
Sbjct: 131 VRGG-ETGRGERLQRCEVTLFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDG 189
Query: 233 DHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 54
HGR K R+ EV+ S + D I +K D +L +EVVRTKYF+M P+
Sbjct: 190 GHGRPAKYSPRI--GEVL----SNEVVDLDPILERKPD--DLPDEVVRTKYFEMRPMKPL 241
Query: 53 EAIDQLEMVDHDFYAFR 3
EA++QL V HDFYAFR
Sbjct: 242 EALEQLVNVGHDFYAFR 258
[20][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWK9_PHYPA
Length = 221
Score = 196 bits (498), Expect = 1e-48
Identities = 103/189 (54%), Positives = 137/189 (72%)
Frame = -1
Query: 569 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 390
M+W G L+ V+L+IQG+++EL+DA+KQ+VE+KVG + S LV+EVDVR+S RGG E G
Sbjct: 1 MAWGGALAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGG-ETG 59
Query: 389 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 210
RG + +RCEVTL+TK+HGVVRAEE AE+ Y SID VS +I RKLRKIKEK+ HGR K
Sbjct: 60 RGGKLQRCEVTLFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPTKS 119
Query: 209 PNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 30
+ + EV+ S++ D I +K D +L +E+VRTKYF+M P+ EA++QL
Sbjct: 120 RHSPRIGEVL----SDEVVDLDPILGRKPD--DLPDEIVRTKYFEMRPMKPLEALEQLVN 173
Query: 29 VDHDFYAFR 3
V HDFYAFR
Sbjct: 174 VGHDFYAFR 182
[21][TOP]
>UniRef100_Q10AC8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative,
expressed n=1 Tax=Oryza sativa Japonica Group
RepID=Q10AC8_ORYSJ
Length = 241
Score = 181 bits (459), Expect = 4e-44
Identities = 89/130 (68%), Positives = 110/130 (84%)
Frame = -1
Query: 599 TKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 420
++R A S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR
Sbjct: 62 SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121
Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240
LS RGG E RGP+ RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK
Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180
Query: 239 ETDHGRHMKG 210
ETD RH+KG
Sbjct: 181 ETD-VRHLKG 189
[22][TOP]
>UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR
Length = 127
Score = 142 bits (359), Expect = 2e-32
Identities = 81/148 (54%), Positives = 99/148 (66%)
Frame = -1
Query: 515 MELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 336
M+L+D VK+HVEDKVG+ +QK S+LVREVD RLS R GGE G+GPR R+C RHG
Sbjct: 1 MQLTDTVKEHVEDKVGKAVQKFSHLVREVDARLSVR-GGELGKGPRIRKC-------RHG 52
Query: 335 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 156
VVRAEE +ET Y +IDLV SIIQ KLRK+KE E+DHGRHMKG NRLK
Sbjct: 53 VVRAEEDSETIYATIDLVLSIIQSKLRKMKE-ESDHGRHMKGLNRLKI------------ 99
Query: 155 EDEIEITPQKDDEEELIEEVVRTKYFDM 72
D+ + +K+D++ L E V Y M
Sbjct: 100 RDDADAVSRKEDDDYLDELVSVASYHQM 127
[23][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
Length = 209
Score = 129 bits (325), Expect = 1e-28
Identities = 82/184 (44%), Positives = 110/184 (59%), Gaps = 4/184 (2%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
+KL+I G+N+E++DA++ +V+ K+ + L E+DV LS R PR +
Sbjct: 1 MKLVIHGKNIEITDAIRDYVQQKIEKAANHFQNLTTEIDVHLSV------ARNPRINPKQ 54
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD-HGRHMKGPNRLK 195
EVT+YT V+RAEE +E Y SIDLVS I R+LRK KE+ D H R + P
Sbjct: 55 TAEVTIYTNG-SVIRAEESSENLYASIDLVSDKIARQLRKFKERRQDKHSRSKEEP---- 109
Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
V +PL ++ D TP EL EEVVRTKYF MPP+T+ EA++QLE+VDHDF
Sbjct: 110 --VVSVPLVTDLTGDR---TP------ELPEEVVRTKYFAMPPMTLREALEQLELVDHDF 158
Query: 14 YAFR 3
Y FR
Sbjct: 159 YMFR 162
[24][TOP]
>UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas
reinhardtii RepID=A8J8B2_CHLRE
Length = 286
Score = 125 bits (313), Expect = 3e-27
Identities = 83/220 (37%), Positives = 117/220 (53%), Gaps = 19/220 (8%)
Frame = -1
Query: 605 TTTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVD 426
T R G + S +V++IIQGR + ++DA+K +VE+KV + + S+ ++EVD
Sbjct: 49 TRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVD 108
Query: 425 VRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIK 246
V LS RGG G + ++ EVT+YT R+GVVR E+ Y +IDLV I+ KL+KIK
Sbjct: 109 VTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQKIK 168
Query: 245 EKETDHGRHMKGPNRLKFSEVILPLPSEDEED------EIEITPQKDDEEELIE------ 102
EK G P R P DEED E+++ Q D+EE ++
Sbjct: 169 EKAISRG---AWPGRAG------PKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQRQFAEL 219
Query: 101 ------EVVRTKYFDM-PPLTVFEAIDQLEMVDHDFYAFR 3
V+R+K + P+TV EAID LE V H FY FR
Sbjct: 220 NRIYPANVMRSKTVVLADPITVEEAIDALEAVGHSFYVFR 259
[25][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=Q2JS19_SYNJA
Length = 191
Score = 124 bits (311), Expect = 6e-27
Identities = 78/183 (42%), Positives = 107/183 (58%), Gaps = 4/183 (2%)
Frame = -1
Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRR 369
KL+IQG+N+E++DA++ +V++K+ R ++ + + EVDV LS R PR +
Sbjct: 3 KLVIQGKNVEITDAIRSYVQEKIERAVKHFAQITSEVDVNLSV------ARNPRISANQS 56
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKF 192
EVT+Y V+RAEE +E Y SID V+ + RKLRK KE+ H RH K
Sbjct: 57 AEVTVYANGT-VIRAEESSENLYASIDRVADKLARKLRKYKERNGVHRIRHSP-----KT 110
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
S + P D + + + EL EVVRTKYF MPP+TV EA+ QLE+VDHDFY
Sbjct: 111 SVAVAQQPLTDPLNT-------ERQAELPPEVVRTKYFAMPPMTVQEALHQLELVDHDFY 163
Query: 11 AFR 3
FR
Sbjct: 164 VFR 166
[26][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
Length = 190
Score = 124 bits (311), Expect = 6e-27
Identities = 78/183 (42%), Positives = 107/183 (58%), Gaps = 4/183 (2%)
Frame = -1
Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRR 369
KL+IQG+N+E++DA++ +V++K+ R + + + EVDV LS R PR ++
Sbjct: 3 KLVIQGKNVEITDAIRSYVQEKIERAVSHFAQITSEVDVNLSV------ARNPRISASQS 56
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKF 192
EVT+Y V+RAEE +E Y SID V+ + RKLRK KE+ H RH K
Sbjct: 57 AEVTVYANGT-VIRAEESSENLYASIDRVADKLARKLRKYKERNGIHRVRHTP-----KT 110
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
S + P D + + + EL EVVRTKYF MPP+TV EA+ QLE+VDHDFY
Sbjct: 111 SVAVAQQPVTDPLNT-------ERQAELPAEVVRTKYFAMPPMTVQEALHQLELVDHDFY 163
Query: 11 AFR 3
FR
Sbjct: 164 VFR 166
[27][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0CDL4_ACAM1
Length = 212
Score = 124 bits (310), Expect = 8e-27
Identities = 75/183 (40%), Positives = 111/183 (60%), Gaps = 4/183 (2%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
+KL+I G+N+E++DA++++V K+ + + L E+DV LS R PR +
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAANHYQNLTTEIDVHLSV------ARNPRITTKQ 54
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
EVTL+ V+RAEE +E Y SIDLV+ I R+LRK KEK R KGPN+
Sbjct: 55 TAEVTLFVNG-SVIRAEESSENLYASIDLVADKIARQLRKYKEK-----RQTKGPNKGSN 108
Query: 191 SEVILPLPSEDEEDEI-EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
+ L + +E+ I ++T +D EL EEVVR KYF + P++V +A++QL++VDHDF
Sbjct: 109 RSKAVALQTPEEQPLIGDLT--RDRAPELPEEVVRCKYFAISPMSVHDALEQLDLVDHDF 166
Query: 14 YAF 6
Y F
Sbjct: 167 YVF 169
[28][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
Length = 212
Score = 124 bits (310), Expect = 8e-27
Identities = 76/183 (41%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
+KL+IQG+N+E++DA+ ++V+ K+ + + L EVDV LS R PR +
Sbjct: 1 MKLVIQGKNLEITDAIHEYVQQKIAKAVSHFQQLTNEVDVHLSV------ARNPRINPRQ 54
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
EVT+Y V+RA+E +E Y SIDLV+ I R+LRK KEK R K K
Sbjct: 55 TAEVTIYANGT-VIRAQESSENLYASIDLVADKIARQLRKYKEK-----RMAKQYQLPKT 108
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
EV+ P D+ D +L EEVVRTKYF MPP+++ EA++QL+++DHDFY
Sbjct: 109 GEVVAQKPIVDDLIG-------DRTVKLPEEVVRTKYFAMPPMSIQEALEQLQLIDHDFY 161
Query: 11 AFR 3
FR
Sbjct: 162 MFR 164
[29][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
Length = 213
Score = 123 bits (309), Expect = 1e-26
Identities = 76/182 (41%), Positives = 108/182 (59%), Gaps = 3/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 369
+KL+I G+N+E++DA++++V K+ + + + EVDV LS R PR TR+
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQ 54
Query: 368 C-EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
EVT+Y V+RAEE +E Y SIDLV+ I R+LRK KE++ D + L
Sbjct: 55 AAEVTIYANG-SVIRAEESSENLYASIDLVADKISRQLRKYKERKQD-----QKTQALPT 108
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
+E I+P + + D EL EEVVRTKYF MPP+TV EA++QL++V HDFY
Sbjct: 109 TETIVP-------ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFY 161
Query: 11 AF 6
F
Sbjct: 162 MF 163
[30][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YIH4_9CYAN
Length = 212
Score = 122 bits (307), Expect = 2e-26
Identities = 75/182 (41%), Positives = 110/182 (60%), Gaps = 3/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
+KL++QG+N+E+++A+ ++V K+ + + + L EVDV LS R PR +
Sbjct: 1 MKLVVQGKNLEITEAIHEYVHQKITKAVSHYQQLTNEVDVHLS------IARNPRINPKQ 54
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
EVT+Y V+RA+E +E Y SIDLV+ I R+LRK K+K G+H+ P K
Sbjct: 55 TAEVTIYANGT-VIRAQESSENLYASIDLVADKIARQLRKFKDKR--QGKHLHPP---KL 108
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
+EV+ P ED I D + EL EVVRTKYF MPP+ + +A++QL++VDHDFY
Sbjct: 109 AEVVENQPVI--EDLIG-----DRQPELPPEVVRTKYFAMPPMNLQDALEQLQLVDHDFY 161
Query: 11 AF 6
F
Sbjct: 162 VF 163
[31][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YSA5_ANASP
Length = 213
Score = 122 bits (305), Expect = 3e-26
Identities = 75/182 (41%), Positives = 107/182 (58%), Gaps = 3/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 369
+KL+I G+N+E++DA++++V K+ + + + EVDV LS R PR TR+
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQ 54
Query: 368 C-EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
EVT+Y V+RAEE +E Y SIDLV+ I R+LRK KE++ D +
Sbjct: 55 AAEVTIYANG-SVIRAEESSENLYASIDLVADKISRQLRKYKERKQDQKTQAQPT----- 108
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
+E I+P + + D EL EEVVRTKYF MPP+TV EA++QL++V HDFY
Sbjct: 109 TETIVP-------ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFY 161
Query: 11 AF 6
F
Sbjct: 162 MF 163
[32][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VJW0_9CYAN
Length = 215
Score = 120 bits (302), Expect = 7e-26
Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
+KL+IQG+N+E++D+++++V K+ + + + EVDV LS R PR +
Sbjct: 1 MKLVIQGKNIEITDSIREYVNQKIEKAVNHFQNMTTEVDVHLSV------ARNPRINTKQ 54
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
EVT+Y + V+RA+E +E Y SIDLV+ IQR+LRK KEK+ K + K
Sbjct: 55 TAEVTIYANKT-VIRAQESSEDLYASIDLVADKIQRQLRKYKEKQ-----QKKTQTQPKT 108
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
VI P ED I D EL EVVR KYF MPP+T+ EA +QL++VDHDFY
Sbjct: 109 GAVIHEAPVV--EDLIG-----DRTPELPTEVVRMKYFAMPPMTIEEATEQLQLVDHDFY 161
Query: 11 AFR 3
FR
Sbjct: 162 MFR 164
[33][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
Length = 284
Score = 120 bits (302), Expect = 7e-26
Identities = 68/185 (36%), Positives = 116/185 (62%), Gaps = 3/185 (1%)
Frame = -1
Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHS-YLVREVDVRLSTRGGGEFGR-GPRT 375
+S K+I+QGR++E++D+++++ E+K+ + + + VREVDVR S+RGG + G
Sbjct: 78 ASTKVIVQGRHLEITDSIREYAEEKINKAVAHFDQHDVREVDVRCSSRGGADKKTPGGAL 137
Query: 374 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMKGPNRL 198
++ EVT+YT R+G++R+EE A+ Y SID VS ++RKLRK+KEK+ + +H K +
Sbjct: 138 QKTEVTVYT-RNGIIRSEEEADDLYASIDAVSDKLERKLRKVKEKKISKRPKHNKNAPKA 196
Query: 197 KFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 18
+ ++ + + DE DE +EVVR K+ + TV+EA +++E + H
Sbjct: 197 QTDAIVEEMQAADE--------ALADESMDYDEVVREKFHPVRKCTVYEAAEEMENLGHT 248
Query: 17 FYAFR 3
F+AFR
Sbjct: 249 FFAFR 253
[34][TOP]
>UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YEZ8_MICAE
Length = 199
Score = 120 bits (301), Expect = 9e-26
Identities = 73/179 (40%), Positives = 105/179 (58%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+KL+IQG N+ +++A+ +VE K+ + ++ + + +VDV LS R P + E
Sbjct: 1 MKLLIQGNNIAVTEAIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHKAE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+Y V+RA+E +E Y SIDLVS I R+LRK KE+ DH H + +K SEV
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTH----STVKTSEV 112
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ P +D D EL EVVR KYF MPP+T+ EA+ QL++VDHDF+ F
Sbjct: 113 VQEKPLDDNLIG-------DRTPELPAEVVRMKYFAMPPMTIEEALTQLQLVDHDFFMF 164
[35][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DKM6_THEEB
Length = 209
Score = 119 bits (298), Expect = 2e-25
Identities = 73/180 (40%), Positives = 104/180 (57%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
++L+I G+N++++D ++ ++ K+ R ++ EVDV LS P+ + E
Sbjct: 1 MRLVIHGKNIDITDGIRSYLNQKIERATSHFQNVINEVDVHLSVARNRS--TAPK-QTAE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT++ V+RAEE +E Y SIDLV+ I RKLRK+KEK D R K N + EV
Sbjct: 58 VTVFVNG-SVIRAEESSENLYASIDLVADKIARKLRKLKEKRQDKSR-AKDTNSVVEPEV 115
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
+ L + TPQ L E+VVR KYF MPP+T+ EA++ LEMVDHDFY FR
Sbjct: 116 VTDLVGDR-------TPQ------LPEQVVRMKYFAMPPMTIQEALEHLEMVDHDFYVFR 162
[36][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2IVM1_NOSP7
Length = 214
Score = 119 bits (297), Expect = 2e-25
Identities = 75/183 (40%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 369
+KL+I +N+E++DA++++V K+ + + EVDV LS R PR TR+
Sbjct: 1 MKLVIHSKNIEITDAIREYVHQKIEKAASHFQSITNEVDVHLSV------ARNPRINTRQ 54
Query: 368 C-EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
EVT+Y V+RAEE +E Y SIDLV+ I R+LRK KE+ D + P +
Sbjct: 55 AAEVTIYANG-SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDQ-KTQSQPTEVVV 112
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
+E ++P D TP EL EVVRTKYF MPP+T+ EA++QL++V HDFY
Sbjct: 113 AESVVPDLIGDR------TP------ELPNEVVRTKYFSMPPMTLAEALEQLQLVGHDFY 160
Query: 11 AFR 3
FR
Sbjct: 161 MFR 163
[37][TOP]
>UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Cyanothece RepID=C7QW97_CYAP0
Length = 205
Score = 119 bits (297), Expect = 2e-25
Identities = 73/186 (39%), Positives = 107/186 (57%)
Frame = -1
Query: 560 DGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGP 381
D + S+KL+IQG N+++++++ +V++K+ + ++ + +VDV LS R
Sbjct: 2 DNGVLSMKLLIQGNNIDVTESIHDYVQEKLEKAVKHFQSITTKVDVHLSVARNA---RIT 58
Query: 380 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 201
+ EVT+Y V+RA+E +E+ Y SIDLVS I R+LRK KEK + K PN
Sbjct: 59 NKHKAEVTVYANGT-VIRAQEGSESLYASIDLVSDKIARQLRKYKEKLNNK----KAPNP 113
Query: 200 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 21
+K EV E + D EL EV+R KYF MPP+T+ EA+ QLE+VDH
Sbjct: 114 VKVGEVTTATAIEGDLIG-------DRTPELPAEVIRMKYFAMPPMTIDEALHQLELVDH 166
Query: 20 DFYAFR 3
DFY FR
Sbjct: 167 DFYMFR 172
[38][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
azollae' 0708 RepID=B9YPU1_ANAAZ
Length = 214
Score = 118 bits (296), Expect = 3e-25
Identities = 74/183 (40%), Positives = 102/183 (55%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
+KL+I G+N+E++DA++++V K+ R + + EV+V LS R PR +
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIERAVNHFQSITNEVNVHLSV------ARNPRISTKQ 54
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
EVT+Y V+RAEE +E Y SIDLV+ I R+LRK KE+ DH N
Sbjct: 55 AAEVTIYANG-SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDHKTQPIPTNEAVV 113
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
+E + D TP EL EVVRTKYF MPP+T+ EA +QL++V HDFY
Sbjct: 114 AEPVADSLIGDR------TP------ELPGEVVRTKYFPMPPMTLAEAQEQLQLVGHDFY 161
Query: 11 AFR 3
FR
Sbjct: 162 MFR 164
[39][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
Length = 213
Score = 117 bits (294), Expect = 6e-25
Identities = 72/182 (39%), Positives = 103/182 (56%), Gaps = 3/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
+KL+I G+N+E++DA++++V K+ + + + EVDV LS R PR +
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVSHFQNITNEVDVHLSV------ARNPRITTKQ 54
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
EVT++ V+RAEE +E Y SIDLV+ I R+LRK KE+ D + N
Sbjct: 55 AAEVTIFANG-SVIRAEESSENLYASIDLVADKIARQLRKYKERLQDQKTNAPPTN---- 109
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
+V++P P + D EL EVVRTKYF MPP+TV EA +QL++V HDFY
Sbjct: 110 -QVLVPEP-------VAADLIGDRTPELPNEVVRTKYFSMPPMTVAEATEQLQLVGHDFY 161
Query: 11 AF 6
F
Sbjct: 162 MF 163
[40][TOP]
>UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7
Length = 199
Score = 117 bits (293), Expect = 7e-25
Identities = 69/180 (38%), Positives = 108/180 (60%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+KL+IQG N+ +++A+ +V+ K+ + ++ L +VDV LS + R + E
Sbjct: 1 MKLLIQGNNITVTEAIHDYVQQKLEKAVKHFQTLTTKVDVHLSV---AKNARIQNKHKAE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+Y V+RA+E +E Y SIDLVS I R+LRK KE++ + H + +K EV
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERKLEQNAH----SPVKAGEV 112
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
+ +++ IE D + EL EVVR KYF MPP+++ EA++QL++VDHDF+ FR
Sbjct: 113 V-------QQETIEENLIGDRQPELPPEVVRMKYFGMPPMSIDEALEQLQLVDHDFFMFR 165
[41][TOP]
>UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WZE1_CYAA5
Length = 201
Score = 117 bits (293), Expect = 7e-25
Identities = 74/181 (40%), Positives = 106/181 (58%)
Frame = -1
Query: 545 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 366
S+KL+IQG N+++++++ +V K+ + ++ + L +VDV LS + R +
Sbjct: 2 SMKLLIQGNNIDVTESINDYVTQKLEKAVKHYQTLTTKVDVHLSV---AKNARITNKHKA 58
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
EVT+Y V+RA+E +E Y SIDLVS I R+LRK KEK +H K + +K E
Sbjct: 59 EVTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNH----KPQSSVKNPE 113
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
V+ E EIE D E L EV+R KYF MPP+++ EA QLE+VDHDFY F
Sbjct: 114 VL-------PEREIEKDLIGDREAALPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYMF 166
Query: 5 R 3
R
Sbjct: 167 R 167
[42][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
Length = 215
Score = 117 bits (292), Expect = 9e-25
Identities = 71/182 (39%), Positives = 102/182 (56%), Gaps = 3/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
+KL+IQG+N+E++D++ ++V K+ + + L EVDV LS R PR +
Sbjct: 1 MKLVIQGKNIEITDSIHEYVNQKIEKAVNHFQQLTTEVDVHLSV------ARNPRINPKQ 54
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
EVT+Y V+RA+E +E Y SIDLV+ I R+LRK KEK K + ++
Sbjct: 55 TAEVTIYANGT-VIRAQESSENLYASIDLVADKIARQLRKYKEKRQSKVNKTKTVDLIES 113
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
V+ L D + EL EVVRTKYF MP +TV EA++QL+++DHDFY
Sbjct: 114 QPVVENLIG-------------DRQAELPSEVVRTKYFPMPSMTVEEALEQLQLIDHDFY 160
Query: 11 AF 6
F
Sbjct: 161 MF 162
[43][TOP]
>UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JSS1_MICAN
Length = 199
Score = 117 bits (292), Expect = 9e-25
Identities = 72/179 (40%), Positives = 105/179 (58%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+KL+IQG N+ +++ + +VE K+ + ++ + + +VDV LS R P R E
Sbjct: 1 MKLLIQGNNIAVTEPIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHRAE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+Y V+RA+E +E Y SIDLVS I R+LRK KE+ DH + +K SEV
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTNAP----VKTSEV 112
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ +E ++ + D EL EVVR KYF MPP+T+ EA+ QL++VDHDFY F
Sbjct: 113 V-------QEKPLDGSLIGDRTPELPAEVVRMKYFAMPPMTIEEALTQLQLVDHDFYMF 164
[44][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
6803 RepID=LRTA_SYNY3
Length = 191
Score = 116 bits (290), Expect = 2e-24
Identities = 71/180 (39%), Positives = 104/180 (57%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+KL+IQG N+ +++A+ +VE+KV R ++ L +VDV LS R + E
Sbjct: 1 MKLLIQGNNITVTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSVARNA---RITNKHKAE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+Y V+RA+E +E Y SIDLV+ I R+LRK KE+ D K +K SE+
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVADKIARQLRKYKERIQD-----KQHGNVKTSEI 111
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
+ E+ +E D EL EV+R KYF MPP+ + +A++QL++VDHDFY FR
Sbjct: 112 V-------EDKPVEENLIGDRAPELPSEVLRMKYFAMPPMAIEDALEQLQLVDHDFYMFR 164
[45][TOP]
>UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307
RepID=A5GUZ2_SYNR3
Length = 187
Score = 114 bits (284), Expect = 8e-24
Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 7/187 (3%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+KL+I GRN+E++ A++ + E K+ R + + +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLEVTPALRDYTETKLSRAVSHFNGMVQEADVHLSV------ARNPRVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVTL+ V+RA+E ++ Y SIDLV+ + R+L++ K++ HG H
Sbjct: 55 AEVTLFASGT-VIRAQERSQNLYASIDLVAGKLARQLQRHKDRRQGHGHH---------- 103
Query: 188 EVILPLPSEDEEDEIEITPQKDD-----EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVD 24
D + E E+ P + D EL VVR KYF MPP++V EAI QLE++D
Sbjct: 104 --------SDLQAEPEVMPLQGDMLQGRHAELPAPVVRRKYFAMPPMSVEEAIHQLEVID 155
Query: 23 HDFYAFR 3
HDFY FR
Sbjct: 156 HDFYVFR 162
[46][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
Length = 199
Score = 113 bits (282), Expect = 1e-23
Identities = 67/180 (37%), Positives = 107/180 (59%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+KL+IQG N+ +++A+ +V++K+ + ++ + +VDV LS + GR + E
Sbjct: 1 MKLLIQGNNITVTEAIHDYVQEKLEKAVKHFQAITTKVDVHLSV---AKNGRVQNKHKAE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+Y V+RA+E +E Y SIDLVS I R+LRK KE+ + K + +K +V
Sbjct: 58 VTVYANG-AVIRAQEGSENLYASIDLVSDKIARQLRKYKERRLEQ----KAYSPVKTGDV 112
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
+ ++ +E D + EL EVVR KYF MP +++ EA++QL++VDHDFY FR
Sbjct: 113 V-------QDQPVEGNLIGDRQPELPPEVVRMKYFAMPLMSIEEALEQLQLVDHDFYMFR 165
[47][TOP]
>UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110
RepID=A3IRI7_9CHRO
Length = 199
Score = 113 bits (282), Expect = 1e-23
Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 2/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+KL+IQG N+++++++ +V K+ + ++ + +VDV LS + R + E
Sbjct: 1 MKLLIQGNNIDVTESINDYVTQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH--MKGPNRLKFS 189
VT+Y V+RA+E +E Y SIDLVS I R+LRK KEK +H +K P+ L +
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNHKPQSSVKSPDVLPET 116
Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
EV +ED I D E EL EV+R KYF MPP+++ EA QLE+VDHDFY
Sbjct: 117 EV--------KEDLIG-----DREVELPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYM 163
Query: 8 FR 3
FR
Sbjct: 164 FR 165
[48][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
Length = 224
Score = 112 bits (281), Expect = 2e-23
Identities = 68/181 (37%), Positives = 107/181 (59%), Gaps = 1/181 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+KL+IQG+N+E++DA++ HV K+ + L+ +VDV LS + P+ + E
Sbjct: 1 MKLVIQGKNIEITDAIRSHVHQKIEKATAHFQTLINKVDVCLSVQNNPRIA--PK-QTAE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT++ + VVRAEE +E+ Y SID+V+ + R+LRK KEK D P ++V
Sbjct: 58 VTVFLN-NVVVRAEESSESLYASIDMVTDKLTRQLRKYKEKRRDQDHATVRP-----TDV 111
Query: 182 ILPLPSED-EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ + D +I+ + + +L + VVR+KYF MPP+TV A++ LE+V HDFY F
Sbjct: 112 DATINAPDITSHNADISEVLNHQPKLPDTVVRSKYFAMPPMTVQTALENLELVGHDFYMF 171
Query: 5 R 3
R
Sbjct: 172 R 172
[49][TOP]
>UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT
Length = 199
Score = 112 bits (280), Expect = 2e-23
Identities = 69/180 (38%), Positives = 107/180 (59%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+KL+IQG N+++++++ +V+ K+ + ++ + +VDV LS + R + E
Sbjct: 1 MKLLIQGNNIDVTESINDYVKQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+Y V+RA+E +E Y SIDLVS I R+LRK KEK ++H K + K EV
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKISRQLRKYKEKVSNH----KPQSSAKLPEV 112
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
LP ++ +++ D + EL EV+R KYF MP +++ EA QLE+VDHDFY FR
Sbjct: 113 ---LPEKEVSEDLI----GDRQAELPPEVIRMKYFAMPSMSIEEAKHQLELVDHDFYMFR 165
[50][TOP]
>UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJ89_SYNPW
Length = 195
Score = 112 bits (279), Expect = 3e-23
Identities = 71/183 (38%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+KL+I GRN++++ A++ + E K+ R I LV+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLDVTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ V+RA+E +E Y SIDLV+S + R+LR+ K++ +DH H G + S
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRFKDRHSDH-HHSHGH---RAS 109
Query: 188 EVILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
E P +DE + D +E +L VR KYF MPP+T+ +A QL+++DHDFY
Sbjct: 110 ET--PTTESVLDDEAIVESLLDGKEVQLPSPGVRRKYFSMPPMTLEQARQQLDLIDHDFY 167
Query: 11 AFR 3
FR
Sbjct: 168 LFR 170
[51][TOP]
>UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IMZ9_9CHRO
Length = 195
Score = 112 bits (279), Expect = 3e-23
Identities = 72/186 (38%), Positives = 103/186 (55%), Gaps = 6/186 (3%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 369
+KL+I GRN+E++ A++++ E K+ R I +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLEVTPAIREYTETKLTRAITHFEGMVKEADVHLSV------ARNPRVPQQI 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ V+RA+EH++ Y SIDLV+S + R+L + KE+ H RH +R
Sbjct: 55 AEVTMFANGT-VIRAQEHSDNLYASIDLVASKLTRQLNRYKERV--HERHQGPVHRSARD 111
Query: 188 E----VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 21
E LP P D E EL VR KYF MPP+++ EA+ QLE++DH
Sbjct: 112 EEAGAASLPPPGSSLTD--------GKEPELPSRGVRRKYFAMPPMSLDEALHQLELIDH 163
Query: 20 DFYAFR 3
DFY FR
Sbjct: 164 DFYVFR 169
[52][TOP]
>UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002
RepID=LRTA_SYNP2
Length = 193
Score = 112 bits (279), Expect = 3e-23
Identities = 71/179 (39%), Positives = 100/179 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+KL+IQG N+ +++++ +VE K+ + + +VDV LS R + E
Sbjct: 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNA---RITDKHKAE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+Y V+RA+E +E Y SIDLVS I R+LRK KEK H++ K SEV
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQE----KTSEV 112
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ ED + D EL EVVR KYF MPP+T+ EA++QL++VDHDFY F
Sbjct: 113 L-------PEDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMF 164
[53][TOP]
>UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
CC9311 RepID=Q0ICJ8_SYNS3
Length = 191
Score = 111 bits (278), Expect = 4e-23
Identities = 71/182 (39%), Positives = 104/182 (57%), Gaps = 2/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+KL+I GRN++++ A++++ E K+ R I LV+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLDVTPALREYTETKLERAIHHFDDLVKEADVHLSV------ARNPRVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DHG H P
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRFKERHSDHG-HRTTPTAAN-D 111
Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
++ P+ED E E +L VR KYF MP +++ EA QLE++DHDFY
Sbjct: 112 VLLTERPTEDSLLE-------GKEAQLPSPGVRRKYFAMPAMSLEEARHQLELIDHDFYL 164
Query: 8 FR 3
FR
Sbjct: 165 FR 166
[54][TOP]
>UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
RepID=Q05SE1_9SYNE
Length = 195
Score = 110 bits (275), Expect = 9e-23
Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+KL+I GRN+E++ A++++ E K+ R +Q + +V E DV LS R PR +
Sbjct: 1 MKLLIHGRNLEVTAALREYTESKLERAVQHYDEMVVEADVHLSV------ARNPRVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKF 192
EVT++ V+RA+E +E Y SIDLV++ + R+LR+ KE+ +DH H +
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVANKLSRQLRRYKERHSDHHHSHGHRASTTPT 113
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
+E +L ++ ++ + E L + VR KYF MPP++V EA QL+++DHDF+
Sbjct: 114 TEAVL------DDSAVDGSLLDGKEAHLPDPGVRRKYFPMPPMSVEEARHQLDLIDHDFF 167
Query: 11 AFR 3
FR
Sbjct: 168 LFR 170
[55][TOP]
>UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CWK2_SYNPV
Length = 195
Score = 110 bits (275), Expect = 9e-23
Identities = 71/183 (38%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+KL+I GRN++++ A++ + E K+ R I LV+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLDVTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ V+RA+E +E Y SIDLV+S + R+LR+ K++ +DH H G K S
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRYKDRHSDH-HHSHGH---KAS 109
Query: 188 EVILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
E P ++E + D +E +L VR KYF MPP+T+ +A QL+++DHDFY
Sbjct: 110 ET--PTTEAVLDNEAVVESLLDGKEVQLPSPGVRRKYFAMPPMTLEQARQQLDLIDHDFY 167
Query: 11 AFR 3
FR
Sbjct: 168 VFR 170
[56][TOP]
>UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp.
RS9917 RepID=A3ZA02_9SYNE
Length = 195
Score = 109 bits (273), Expect = 2e-22
Identities = 68/182 (37%), Positives = 106/182 (58%), Gaps = 2/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+KL+I GRN+EL+ A++ + + K+ R +Q +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLELTPALRDYTQSKLERAVQHFDDMVKEADVHLSV------ARNPRVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H +R +
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRFKERHSDH--HHSNGHRASET 111
Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
P + + I+ + E +L + VR KYF MPP+++ EA QL+++DHDFY
Sbjct: 112 P---PTDAIADAAPIDGSLLDGKEVQLPDPGVRRKYFAMPPMSLEEARHQLDVIDHDFYL 168
Query: 8 FR 3
FR
Sbjct: 169 FR 170
[57][TOP]
>UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9
Length = 195
Score = 108 bits (270), Expect = 3e-22
Identities = 69/183 (37%), Positives = 101/183 (55%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+K++I GRN+E++ A++++ K+ R +RE DV LS R PR +
Sbjct: 1 MKVLIHGRNLEITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ V+RA+E +E Y SIDLV + R+LRK KE+ DH H G S
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHG-----HS 107
Query: 188 EVILPLPSE-DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
+ P E +E +E + E +L E VR KYF MPP+T+ +A QL+++DHDFY
Sbjct: 108 ASLTPSTEEVSDESAVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFY 167
Query: 11 AFR 3
FR
Sbjct: 168 LFR 170
[58][TOP]
>UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9303 RepID=A2CBL6_PROM3
Length = 195
Score = 108 bits (269), Expect = 4e-22
Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+KL+I GRN+EL+ A++++ + K+ R IQ +V+E DV LS R P +
Sbjct: 1 MKLLIHGRNLELTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLK 195
EVT++ V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H G +
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTP 112
Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
+E ++ +E I+ + E L VR KYF MPP++V +A QL+++DHDF
Sbjct: 113 TTEAVI------DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARHQLDLIDHDF 166
Query: 14 YAFR 3
Y FR
Sbjct: 167 YLFR 170
[59][TOP]
>UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N7A9_9CHLO
Length = 245
Score = 108 bits (269), Expect = 4e-22
Identities = 72/198 (36%), Positives = 110/198 (55%), Gaps = 5/198 (2%)
Frame = -1
Query: 581 ASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHS-YLVREVDVRLSTRG 405
AS + + P K+I+QGR++E+++A++ + E K+ + + + VREVDV S R
Sbjct: 33 ASGARAMAAPAKGTKVIVQGRHLEITEAIRDYCEQKINKAVSHFDMHDVREVDVTCSARS 92
Query: 404 GGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH- 228
E +G + +VT+YT R+GVVR+EE A+ Y SID VS I+RKLRKIKEK+
Sbjct: 93 --EKQQGGDLQMTQVTVYT-RNGVVRSEEEADNLYASIDAVSDKIERKLRKIKEKKNSKK 149
Query: 227 -GRHMKGPNRLKFSEVILPLPSEDE--EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTV 57
G+ P + + ++++ DE DEIE EE V KY + T
Sbjct: 150 AGKTKANP-KAQTADIVAAAAEADEARADEIE-----------FEETVGVKYMAVKTSTA 197
Query: 56 FEAIDQLEMVDHDFYAFR 3
EA +++E + H FYAF+
Sbjct: 198 MEAAEEMESLGHVFYAFK 215
[60][TOP]
>UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
str. MIT 9313 RepID=Q7V8W0_PROMM
Length = 195
Score = 107 bits (267), Expect = 8e-22
Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+KL+I GRN+EL+ A++++ + K+ R IQ +V+E DV LS R P +
Sbjct: 1 MKLLIHGRNLELTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLK 195
EVT++ V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H G +
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTP 112
Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
+E ++ +E I+ + E L VR KYF MPP++V +A QL+++DHDF
Sbjct: 113 TTEAVI------DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARYQLDLIDHDF 166
Query: 14 YAFR 3
Y FR
Sbjct: 167 YLFR 170
[61][TOP]
>UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE
Length = 195
Score = 107 bits (266), Expect = 1e-21
Identities = 68/183 (37%), Positives = 101/183 (55%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+K++I GRN+E++ A++++ K+ R +RE DV LS R PR +
Sbjct: 1 MKVLIHGRNLEITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ V+RA+E +E Y SIDLV + R+LRK KE+ DH H G S
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHG-----HS 107
Query: 188 EVILPLPSE-DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
+ P E +E +E + E +L E VR KYF MPP+T+ +A QL+++DHDFY
Sbjct: 108 ASLTPSTEEVSDESVVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFY 167
Query: 11 AFR 3
F+
Sbjct: 168 LFK 170
[62][TOP]
>UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U8F3_SYNPX
Length = 195
Score = 106 bits (265), Expect = 1e-21
Identities = 65/183 (35%), Positives = 104/183 (56%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+KL+I GRN+E++ A++ + + K+ R VRE DV LS R PR +
Sbjct: 1 MKLLIHGRNLEITPALRDYTQTKLERATHHFGNAVREADVHLSV------ARNPRVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKF 192
EVT++ V+RA+E +E Y SIDL +S + R+LR+ KE+ +DH H +
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLAASKLARQLRRWKERHSDHHHSHGHSASTTPA 113
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
+E + ++ +++ + + E EL + VR KYF MPP+++ EA QL+++DHDFY
Sbjct: 114 TEAVT------DDSQVDGSLLQGREAELPDPGVRRKYFAMPPMSLEEARRQLDLIDHDFY 167
Query: 11 AFR 3
FR
Sbjct: 168 LFR 170
[63][TOP]
>UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str.
AS9601 RepID=A2BPM8_PROMS
Length = 194
Score = 106 bits (265), Expect = 1e-21
Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 4/184 (2%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLK 195
EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL- 112
Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
P+ S + + ++ E L E ++ KYF+M P++ EA QL+++DHDF
Sbjct: 113 ------PIESMESNFLDKALFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDF 166
Query: 14 YAFR 3
Y FR
Sbjct: 167 YVFR 170
[64][TOP]
>UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9301 RepID=A3PBB8_PROM0
Length = 194
Score = 106 bits (264), Expect = 2e-21
Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 4/184 (2%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLK 195
EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL- 112
Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
P+ S + + ++ E L E ++ KYF+M P++ EA QL+++DHDF
Sbjct: 113 ------PIESMESNFLDKAFFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDF 166
Query: 14 YAFR 3
Y FR
Sbjct: 167 YVFR 170
[65][TOP]
>UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus
marinus clone HF10-88F10 RepID=Q1PJW9_PROMA
Length = 194
Score = 105 bits (263), Expect = 2e-21
Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLK 195
EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H K N+
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNNQFK--NKES 111
Query: 194 FSEVILPLPSEDEEDEI--EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 21
F PSE+ E E + E L E ++ KYF+M P++ EA QL+++DH
Sbjct: 112 F-------PSENTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDH 164
Query: 20 DFYAFR 3
DFY FR
Sbjct: 165 DFYVFR 170
[66][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
Length = 207
Score = 105 bits (262), Expect = 3e-21
Identities = 67/181 (37%), Positives = 105/181 (58%), Gaps = 1/181 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+KL++QG N++++ A+ +V+ K+ + + + + E+DV LS + + + E
Sbjct: 1 MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+Y V+RAEE E Y SIDLVS I R+L+K KEK D KG +L +E
Sbjct: 58 VTIYANGT-VIRAEECNENLYASIDLVSDKITRQLKKYKEKLRDR----KG--QLSTAET 110
Query: 182 ILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
++ D +T + + EL +++VRTKYF MP +TV +A+ QL++VDHDFY F
Sbjct: 111 -----ADQLSDGALVTDLLNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMF 165
Query: 5 R 3
R
Sbjct: 166 R 166
[67][TOP]
>UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC
Length = 195
Score = 105 bits (261), Expect = 4e-21
Identities = 65/183 (35%), Positives = 102/183 (55%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+KL+I GRN+E++ A++ + + K+ R VRE DV LS R PR +
Sbjct: 1 MKLLIHGRNLEITPALRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKF 192
EVT++ V+RA+E +E Y SIDL + + R+LR+ KE+ +DH H +
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPS 113
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
++V+ ++ +E + + E EL + VR KYF MPP+ + EA QL+++DHDFY
Sbjct: 114 TDVV------NDASPVEASLLQGREAELPDPGVRRKYFAMPPMGLEEARRQLDLIDHDFY 167
Query: 11 AFR 3
FR
Sbjct: 168 LFR 170
[68][TOP]
>UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. NATL1A RepID=A2C0K6_PROM1
Length = 194
Score = 104 bits (260), Expect = 5e-21
Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+KL+I GRN+EL+ +++ + + K+ + +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLELTPSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ V+RA+E +E Y SIDLV++ + R+LRK KE+ H H + +
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHNNQSTKSVQN 113
Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
E I S D + + E L VR KYF+M P+T+ +A QL+++DHDFY
Sbjct: 114 EKIENFSSSDH------SLIEGKEPHLPNPGVRRKYFEMDPMTIEQARVQLDLIDHDFYL 167
Query: 8 FR 3
FR
Sbjct: 168 FR 169
[69][TOP]
>UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH
5701 RepID=A3YVD7_9SYNE
Length = 195
Score = 104 bits (260), Expect = 5e-21
Identities = 65/186 (34%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 369
+KL+I GRN++++ A++ + E K+GR I + LV+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLDVTPAIRDYTEAKLGRAINHYEGLVKEADVHLSV------ARNPRVAQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ V+RA+E +E Y SID+V+ + R+LR+ K++ ++H N
Sbjct: 55 AEVTVFANGV-VIRAQERSENLYASIDMVAGKLSRQLRRYKDRLSNHHGAGSPAN----- 108
Query: 188 EVILPLPSEDEEDEIE-ITPQK---DDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 21
+ + E+ +E + P D E L VR KYF MP +++ +A+ QLE++DH
Sbjct: 109 -----VGDDTEQPSLEGVLPNDLIGDREPALPVPAVRRKYFSMPAMSLDQALHQLELIDH 163
Query: 20 DFYAFR 3
DFY FR
Sbjct: 164 DFYVFR 169
[70][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
PCC 6301 RepID=Q5N179_SYNP6
Length = 207
Score = 103 bits (258), Expect = 8e-21
Identities = 66/181 (36%), Positives = 105/181 (58%), Gaps = 1/181 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+KL++QG N++++ A+ +V+ K+ + + + + E+DV LS + + + E
Sbjct: 1 MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+Y V+RAEE E Y SIDLVS I R+L+K KE+ D KG +L +E
Sbjct: 58 VTIYANGT-VIRAEECNENLYASIDLVSDKITRQLKKYKEELRDR----KG--QLSTAET 110
Query: 182 ILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
++ D +T + + EL +++VRTKYF MP +TV +A+ QL++VDHDFY F
Sbjct: 111 -----ADQLSDGALVTDLLNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMF 165
Query: 5 R 3
R
Sbjct: 166 R 166
[71][TOP]
>UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9515 RepID=A2BV60_PROM5
Length = 194
Score = 103 bits (257), Expect = 1e-20
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNIELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRLSYQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ ++RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F+
Sbjct: 55 AEVTIFASGT-IIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHYKNLNYNLEKNKHSFT 113
Query: 188 EVILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
+ + D I+ D E +L E ++ KYF+M P+++ EA QL+++DHDFY
Sbjct: 114 N------TNEHLDSIDKNIFNDKREAKLPEPSIKNKYFEMIPISLEEARKQLDLIDHDFY 167
Query: 11 AFR 3
FR
Sbjct: 168 VFR 170
[72][TOP]
>UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP
Length = 194
Score = 103 bits (256), Expect = 1e-20
Identities = 63/183 (34%), Positives = 102/183 (55%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+K++I G+N+EL+ +K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNLELTGPLKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ ++RAEE E Y SIDLVS+ + RKLRK KE+ + N+ +S
Sbjct: 55 AEVTIFANGT-IIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHNKKLHNNLVKNKNSYS 113
Query: 188 EVILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
I +E D I+ ++ E L E ++ KYF+M P+++ EA QL+ +DHDFY
Sbjct: 114 NAI------EESDSIDKDIFNEEREVRLPEPSIKKKYFEMIPISLEEARKQLDFIDHDFY 167
Query: 11 AFR 3
FR
Sbjct: 168 LFR 170
[73][TOP]
>UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str.
MIT 9215 RepID=A8G3B2_PROM2
Length = 194
Score = 103 bits (256), Expect = 1e-20
Identities = 65/183 (35%), Positives = 103/183 (56%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF- 112
Query: 188 EVILPLPSEDEEDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
L ++ E ++ KD E L E ++ KYF+M P++ EA QL+++DHDFY
Sbjct: 113 -----LIADTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFY 167
Query: 11 AFR 3
FR
Sbjct: 168 VFR 170
[74][TOP]
>UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured
Prochlorococcus marinus clone ASNC2259
RepID=Q1PKX8_PROMA
Length = 194
Score = 103 bits (256), Expect = 1e-20
Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 4/184 (2%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLK 195
EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL- 112
Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
P+ S + + + E L + ++ KYF+M P++ EA QL+++DHDF
Sbjct: 113 ------PIESMESNFLDKAFFIEGTEASLPKPSIKNKYFEMTPISSDEARKQLDLIDHDF 166
Query: 14 YAFR 3
Y FR
Sbjct: 167 YVFR 170
[75][TOP]
>UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT
9202 RepID=B9P0E9_PROMA
Length = 194
Score = 103 bits (256), Expect = 1e-20
Identities = 63/182 (34%), Positives = 100/182 (54%), Gaps = 2/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF- 112
Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
P+ + E + E L E ++ KYF+M P++ EA QL+++DHDFY
Sbjct: 113 ----PIADTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYV 168
Query: 8 FR 3
FR
Sbjct: 169 FR 170
[76][TOP]
>UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Prochlorococcus marinus str. NATL2A
RepID=Q46H11_PROMT
Length = 194
Score = 102 bits (255), Expect = 2e-20
Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 2/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+KL+I GRN+EL+ +++ + + K+ + +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLELTQSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ V+RA+E +E Y SIDLV++ + R+LRK KE+ H H + +
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHHNQSTKSVQN 113
Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
E S D +T K E L VR KYF+M P+ + +A QL+++DHDFY
Sbjct: 114 EDTQNFSSSDH----SLTEGK--EPHLPSPGVRRKYFEMTPMNIEQARVQLDLIDHDFYL 167
Query: 8 FR 3
FR
Sbjct: 168 FR 169
[77][TOP]
>UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CH01_9SYNE
Length = 195
Score = 102 bits (254), Expect = 2e-20
Identities = 63/183 (34%), Positives = 102/183 (55%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+KL+I GRN+E++ +++ + + K+ R VRE DV LS R PR +
Sbjct: 1 MKLLIHGRNLEITPSLRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKF 192
EVT++ V+RA+E +E Y SIDL + + R+LR+ KE+ +DH H +
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPS 113
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
++V+ ++ +E + + E EL + VR KYF MPP+ + +A QL+++DHDFY
Sbjct: 114 TDVV------NDASPVESSLLQGREAELPDPGVRRKYFAMPPMGLEDARRQLDLIDHDFY 167
Query: 11 AFR 3
FR
Sbjct: 168 LFR 170
[78][TOP]
>UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus
RepID=Q7VDH9_PROMA
Length = 195
Score = 101 bits (251), Expect = 5e-20
Identities = 64/183 (34%), Positives = 105/183 (57%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
+K++I GRN+EL+ A++++ + K+ + I +V+E DV LS + PR +
Sbjct: 1 MKVLIHGRNLELTPALREYTKSKLEKAIHHFGDMVKEADVHLSV------AKNPRVPQQT 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ V+RA+E ++ Y SIDLVS+ + R+LR+ KE+ +DH H G
Sbjct: 55 AEVTVFANGT-VIRAQERSQNLYASIDLVSNKLCRQLRRYKERHSDH-HHSPG-----HR 107
Query: 188 EVILPLPSEDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
I P E ED+ I + + E +L + +R KYF M P+ + +A QL+++DHDFY
Sbjct: 108 ASITPTTEEVLEDKSINGSLVEGKEAKLPKPGIRRKYFPMHPMNIEQAQHQLDLIDHDFY 167
Query: 11 AFR 3
F+
Sbjct: 168 LFK 170
[79][TOP]
>UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Prochlorococcus marinus str. MIT 9312
RepID=Q31CD8_PROM9
Length = 194
Score = 100 bits (250), Expect = 7e-20
Identities = 62/180 (34%), Positives = 98/180 (54%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K++I G+N+EL+ A+K++ + K+ + + +V+E D+ LS E + E
Sbjct: 1 MKILIHGKNLELTGALKEYTQAKIEKATHHYKDIVKEADIHLSI----EKNPSVSLQTAE 56
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ + N F
Sbjct: 57 VTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNYKTNYINQFKNNESF--- 112
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
P+ S D + ++ E L E ++ KYF+M P++ EA QL+++DHDFY FR
Sbjct: 113 --PIESADSNVLDKTLFKQGREASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFR 170
[80][TOP]
>UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9211 RepID=A9BE19_PROM4
Length = 197
Score = 100 bits (250), Expect = 7e-20
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 369
+KL+I GRN+EL+ +++++ + K+ + I +V+E DV LS + P +
Sbjct: 1 MKLLIHGRNLELTPSLREYTQSKLEKAIHHFDGIVQEADVHLS------IAKNPSVPQQI 54
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EVT++ V+RA+E ++ Y SIDLV++ + R+LRK KE+ +DH H G S
Sbjct: 55 AEVTVFANGT-VIRAQERSQNLYASIDLVATKLCRQLRKYKERHSDH-HHSHG-----HS 107
Query: 188 EVILPLPSEDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
+ P ED+ I+ + + E L +R KYF MPP++ +A QL+++DHDFY
Sbjct: 108 ASLTPTTEAVVEDKAIDSSLIQGKEAHLPTPGIRRKYFSMPPMSTEQARHQLDLIDHDFY 167
Query: 11 AFR 3
F+
Sbjct: 168 MFK 170
[81][TOP]
>UniRef100_Q5MCR1 Chloroplast-specific ribosome-associated protein n=1 Tax=Volvox
carteri f. nagariensis RepID=Q5MCR1_VOLCA
Length = 232
Score = 98.2 bits (243), Expect = 5e-19
Identities = 46/109 (42%), Positives = 75/109 (68%)
Frame = -1
Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR 369
S+V++IIQGR + +++A+K++VE+KV + IQ ++ ++EVDV LS RGG G + ++
Sbjct: 72 STVRIIIQGRKLPVTNAIKEYVEEKVAKAIQNFAHTLKEVDVTLSARGGDTGTHGKKEQK 131
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 222
+VT++T R+GVVR E+ Y +IDLV I+ KL ++KEK G+
Sbjct: 132 VDVTIFTLRNGVVRVEDRESNLYAAIDLVCDKIRSKLTRVKEKAITKGK 180
[82][TOP]
>UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI
Length = 187
Score = 97.1 bits (240), Expect = 1e-18
Identities = 64/183 (34%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 369
++ I G+N+E+++ ++ +V K+ +V L VDV LS R PR R
Sbjct: 1 MQFAIHGKNIEVTEPIRDYVSSKLDKVFAHFDQLTMGVDVYLSV------ARNPRISRSH 54
Query: 368 -CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
EVT+ ++RAEE E Y SIDLV+ + R++RK KE+ + G
Sbjct: 55 SAEVTVQASGT-IIRAEEETENLYASIDLVADKLHRQMRKYKERMQKKPKPKTG--LAVA 111
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
++ + LP+ DE+ L +EVVRTKYF MPP++ EA+D L +VDHDF+
Sbjct: 112 NQAPISLPNGDEK-----------ATALPKEVVRTKYFAMPPMSPEEALDHLALVDHDFF 160
Query: 11 AFR 3
FR
Sbjct: 161 VFR 163
[83][TOP]
>UniRef100_C1CWW9 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Deinococcus deserti VCD115 RepID=C1CWW9_DEIDV
Length = 188
Score = 94.7 bits (234), Expect = 5e-18
Identities = 61/175 (34%), Positives = 97/175 (55%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
+ GRN+E+SDA++ +V++K+ R + +++ + + V L+ R + GR R EV L
Sbjct: 6 LSGRNVEVSDAMRDYVQEKLTR-LDRYNDQITDARVTLTVRDVRDAGR---RNRVEVQLN 61
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
+G++RAEEH Y +ID S +++R+LRK K R+MK + V P
Sbjct: 62 VP-NGIIRAEEHHSDMYAAIDKASDVLERQLRKFKT------RYMKQ----RHETVPQPG 110
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
P E D + DD E + E+VR K FDM P++ +A+ Q+E + HDFY F
Sbjct: 111 PGPAEAD---VNAGLDDVSEFMPEIVRQKRFDMRPMSPEDAVTQMEALGHDFYVF 162
[84][TOP]
>UniRef100_B9I261 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I261_POPTR
Length = 118
Score = 92.4 bits (228), Expect = 3e-17
Identities = 49/86 (56%), Positives = 60/86 (69%)
Frame = -1
Query: 263 KLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTK 84
KLRKIK+KE+DHGRHMKG N+LK E P+ E E ++ +KDD+ ++E V TK
Sbjct: 28 KLRKIKDKESDHGRHMKGFNKLKVRE---PMSQEVENVADTVSQRKDDDN--LDEAVHTK 82
Query: 83 YFDMPPLTVFEAIDQLEMVDHDFYAF 6
YFDMPPLTV EAI +L VDH FY F
Sbjct: 83 YFDMPPLTVHEAIVRLGNVDHAFYGF 108
[85][TOP]
>UniRef100_Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Deinococcus geothermalis DSM 11300
RepID=Q1IYK5_DEIGD
Length = 186
Score = 91.3 bits (225), Expect = 6e-17
Identities = 59/176 (33%), Positives = 94/176 (53%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
+ GRN++++DA++ +VE+K+ R + + S + + V L+ R + GR R EV L
Sbjct: 6 LSGRNVDVTDAMRDYVEEKLTR-LDRFSDQITDARVVLTVRDVRDAGR---RNRVEVQLN 61
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
+G++RAEEH Y +ID S +++R+LRK K K H + P P
Sbjct: 62 VP-NGIIRAEEHHADMYAAIDRASDVLERQLRKFKTKYLRHRQEAAPP----------PQ 110
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
P E D D+ E E+VRTK FD+ P++ +A+ Q+E + HDFY F+
Sbjct: 111 PGLAEAD----VNAGLDDTEFRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYVFK 162
[86][TOP]
>UniRef100_C2D8Z3 Possible ribosome-associated inhibitor A n=1 Tax=Atopobium vaginae
DSM 15829 RepID=C2D8Z3_9ACTN
Length = 192
Score = 90.9 bits (224), Expect = 7e-17
Identities = 59/175 (33%), Positives = 85/175 (48%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
I GR + +SDA++ HV+ KVG ++ DV L P + CEVT+Y
Sbjct: 6 ISGRKVSVSDALRDHVQHKVGDALKVFDITPMSCDVVLRVDKNHS---NPDRKTCEVTVY 62
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
R+ VVR E +E Y +ID S + R+LRK K + D + + P P
Sbjct: 63 V-RNNVVRVEASSEDMYAAIDAASDKVTRQLRKYKTRIIDRKQRSQAP---------APA 112
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
PS+D D I+ D +VR KY D+ P+T EA+ Q +++ HDFY F
Sbjct: 113 PSKDLSDLIDEVADDD-------MLVREKYIDLHPMTEEEALVQTDLIGHDFYVF 160
[87][TOP]
>UniRef100_Q9RVE7 Protein DR_1082 n=1 Tax=Deinococcus radiodurans RepID=UA82_DEIRA
Length = 191
Score = 89.4 bits (220), Expect = 2e-16
Identities = 57/176 (32%), Positives = 97/176 (55%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
+ GRN+E+++ ++++VE+K+ R + +++ + + V L+ R + R R EV L
Sbjct: 6 LSGRNVEVTEPMREYVEEKLSR-LDRYTDQITDARVTLTVR---DVRNNERRNRVEVQLN 61
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
G++RAEEH Y +ID S +++R+LRK K R+MK R + LP
Sbjct: 62 VPG-GIIRAEEHHADMYAAIDKASDVLERQLRKFKT------RYMK--QRQEGRPEPLPG 112
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
P+E E + DD E E+VR K F++ P++ +A+ Q+E + HDFY F+
Sbjct: 113 PAEAEVNAQGSGAAMDDVSEFHPEIVRQKRFELRPMSAEDAVVQMEALGHDFYVFQ 168
[88][TOP]
>UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
RepID=B0P2P9_9CLOT
Length = 179
Score = 87.8 bits (216), Expect = 6e-16
Identities = 61/185 (32%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Frame = -1
Query: 551 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVRE--VDVRLSTRGGGEFGRGPR 378
+ ++K II G+N+E+++ +K +E+K+GR+ YLV + V+V LS + G +
Sbjct: 1 MGAMKFIISGKNIEVTEGIKAAIEEKLGRL---DKYLVDDTIVNVTLSVQKGRQ------ 51
Query: 377 TRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 198
+ EVT+ K H ++RAEE +E Y SIDLV +I+R++R+ K + +
Sbjct: 52 --KIEVTIPMKGH-IIRAEEGSEDMYVSIDLVVDVIERQIRRYKTRLMNQ---------- 98
Query: 197 KFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 18
K+ ++ED++E DDE +I R+K F + P+ V EA Q+E++ HD
Sbjct: 99 KYDGTSFKQEFMEQEDDVE-----DDEIRII----RSKKFAIKPMDVEEACVQMELLGHD 149
Query: 17 FYAFR 3
F+ FR
Sbjct: 150 FFVFR 154
[89][TOP]
>UniRef100_C8W7H2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Atopobium parvulum DSM 20469 RepID=C8W7H2_ATOPD
Length = 196
Score = 87.0 bits (214), Expect = 1e-15
Identities = 58/179 (32%), Positives = 91/179 (50%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
V + I GR + +S+A++ HV+ K+G ++ DV L P + E
Sbjct: 2 VDIKISGRKVSISEALRAHVDQKIGDALKVFDITPMSCDVVLRVDKNPS---NPDRKTTE 58
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT++ R+ VVR ++ Y +ID + + R+LRK K K + HMK SE
Sbjct: 59 VTVFV-RNNVVRVTASSDDMYAAIDEAADKVSRQLRKYKTKVVERRHHMK-------SER 110
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ L ED + IEI E+L +++VR KY D+ P+T EA+ Q +++ HDFY F
Sbjct: 111 GIALTQEDLANLIEIPA-----EDLDDQLVREKYVDLEPMTEEEALVQTDLLGHDFYVF 164
[90][TOP]
>UniRef100_B9I248 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I248_POPTR
Length = 115
Score = 86.3 bits (212), Expect = 2e-15
Identities = 51/101 (50%), Positives = 61/101 (60%), Gaps = 14/101 (13%)
Frame = -1
Query: 266 RKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDE--EELI---- 105
RKLRKIK+KE+DHGRHMKG N+LK E P+ E D ++ +KDD+ +EL
Sbjct: 8 RKLRKIKDKESDHGRHMKGFNKLKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHL 64
Query: 104 --------EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
V TKYFDMPPLTV EAI +L VDH FY F
Sbjct: 65 VTIHSIISSNAVHTKYFDMPPLTVDEAIVRLGNVDHAFYGF 105
[91][TOP]
>UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
16795 RepID=B0A7Y1_9CLOT
Length = 187
Score = 85.1 bits (209), Expect = 4e-15
Identities = 60/180 (33%), Positives = 96/180 (53%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K++I G+ +EL+D +K VEDK+ + + ++ + EV V +S R + + E
Sbjct: 7 MKILITGKKIELTDGIKGAVEDKLSK-LDRYLHEDTEVKVTVSARKAKQ--------KIE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ ++RAE+ E Y +ID+V + ++LR+ K K +KG + K E
Sbjct: 58 VTIIPINGPIIRAEDSEENLYAAIDVVYDKLNKQLRRYKNK-------LKGKYQSKGQES 110
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
I ED E KD E +++ E R K FDM P++ EA+ Q+E+V HDFY FR
Sbjct: 111 IRFQNIEDNAAE-----DKDGEFDIVIE--RHKKFDMKPMSPEEAVLQMELVGHDFYMFR 163
[92][TOP]
>UniRef100_C8WMZ8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Eggerthella lenta DSM 2243 RepID=C8WMZ8_9ACTN
Length = 191
Score = 84.3 bits (207), Expect = 7e-15
Identities = 57/181 (31%), Positives = 99/181 (54%), Gaps = 2/181 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRGPRTRR 369
+ + + GR M ++DA++++ E+K+G ++ LV E+ + + PR
Sbjct: 1 MSITVTGRKMPVTDALREYAEEKIGNSMKVMDIDPLVAEIVLFVEKNPAN-----PRPAV 55
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
CEVTL TK H ++R EEH E Y +ID+ ++ + R+LRK K K D R ++ +
Sbjct: 56 CEVTLRTKGH-IIRVEEHEEDMYAAIDVAAAKVVRQLRKYKTKVVD--RKLRAAD----- 107
Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
E I PS E +++ Q+ + +EVVR K + PLT EA+ +++++ HDF+A
Sbjct: 108 ETIRIEPSAAGELDVDGLMQELSD----DEVVRVKTIEFEPLTEEEALVKIDLLGHDFFA 163
Query: 8 F 6
+
Sbjct: 164 Y 164
[93][TOP]
>UniRef100_C4V4X1 Ribosome-associated inhibitor A n=1 Tax=Selenomonas flueggei ATCC
43531 RepID=C4V4X1_9FIRM
Length = 181
Score = 83.2 bits (204), Expect = 2e-14
Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 1/177 (0%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
I+G+N+E++ A++ +VE +VG+ I K+ V E+ V LS G + + EVT
Sbjct: 6 IRGKNVEVTPALRDYVEKRVGK-ITKYFDNVGEIAVLLSVEG--------KHHKVEVTAP 56
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-P 174
R ++R EEH+E Y SIDLV ++R++RK K K R +G + + E P
Sbjct: 57 VARGILLRGEEHSEDMYSSIDLVIEKLERQIRKQKTKLAR--RFRQGGFKAEAVETFAQP 114
Query: 173 LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
+P EDE + VV+TK F + P+ V EAI Q+ +++H F+ FR
Sbjct: 115 IPEEDE----------------LYPVVKTKRFTLQPMDVQEAIMQMNLLNHHFFVFR 155
[94][TOP]
>UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F5F53
Length = 183
Score = 82.8 bits (203), Expect = 2e-14
Identities = 52/180 (28%), Positives = 100/180 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+ +II G+ +EL+DA+K +E K+ ++ +Y+ + DV+++ R R ++ E
Sbjct: 1 MNIIISGKQIELTDAIKNKIESKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ T ++RAE+ E Y +ID+V + ++L+K K++ D + K ++F +
Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDA 108
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
+ L E E+ D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+
Sbjct: 109 EINLADEQED-------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159
[95][TOP]
>UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630
RepID=Q18CN1_CLOD6
Length = 183
Score = 82.4 bits (202), Expect = 3e-14
Identities = 52/180 (28%), Positives = 100/180 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+ +II G+ +EL+DA+K +E K+ ++ +Y+ + DV+++ R R ++ E
Sbjct: 1 MNIIISGKQIELTDAIKNKIETKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ T ++RAE+ E Y +ID+V + ++L+K K++ D + K ++F +
Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDA 108
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
+ L E E+ D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+
Sbjct: 109 EINLADEQED-------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159
[96][TOP]
>UniRef100_C2KX79 Ribosome-associated inhibitor A n=1 Tax=Oribacterium sinus F0268
RepID=C2KX79_9FIRM
Length = 176
Score = 82.4 bits (202), Expect = 3e-14
Identities = 60/180 (33%), Positives = 93/180 (51%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K+ I GRN+ L+D +K VE K+G+ + K +V LST+ ++ E
Sbjct: 1 MKITITGRNLSLTDGLKNGVEKKLGK-LDKFFQAETPCNVTLSTQKD--------MQKIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K V+RAEE Y SIDLV +++R++RK K K RH
Sbjct: 52 VTIPVKG-SVIRAEEATPDMYQSIDLVVDVLERQIRKYKNKLIQ--RHQAA--------- 99
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
S+ + IE P +D+EE ++VRTK+ D+ P+T EA Q+E++ H F+ F+
Sbjct: 100 -----SDFSSEFIEEKPAQDEEEI---KIVRTKHIDLKPMTAEEACLQMELLGHSFFVFQ 151
[97][TOP]
>UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile
RepID=C9XIR4_CLODI
Length = 183
Score = 81.6 bits (200), Expect = 4e-14
Identities = 52/180 (28%), Positives = 100/180 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+ +II G+ +EL+DA+K +E K+ ++ +Y+ + DV+++ R R ++ E
Sbjct: 1 MNIIISGKQIELTDAIKNKIETKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ T ++RAE+ E Y +ID+V + ++L+K K++ D + K ++F +
Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDS 108
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
+ L E E+ D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+
Sbjct: 109 EINLADEQED-------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159
[98][TOP]
>UniRef100_Q9CHS8 Putative uncharacterized protein ygdA n=1 Tax=Lactococcus lactis
subsp. lactis RepID=Q9CHS8_LACLA
Length = 185
Score = 81.6 bits (200), Expect = 4e-14
Identities = 55/179 (30%), Positives = 94/179 (52%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++DA++ +VEDK+G+ + K+ EV ++ + E + + E
Sbjct: 2 IKFNIRGENVEVTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYSE-----KRAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VTL K + +RAE+ ++ Y SID V ++R++RK K + R+ P F +
Sbjct: 56 VTLPAK-NVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQAFGDE 113
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
PL DE E + ++VRTK+ + P+ EA+ Q++M+ HDFY F
Sbjct: 114 FAPLEKADEVAEDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVF 160
[99][TOP]
>UniRef100_Q3CZ63 Ribosomal subunit interface protein n=6 Tax=Streptococcus
agalactiae RepID=Q3CZ63_STRAG
Length = 184
Score = 81.6 bits (200), Expect = 4e-14
Identities = 57/179 (31%), Positives = 101/179 (56%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++++VE K+ +V +K+ +E+D R++ + E +T + E
Sbjct: 2 IKYSIRGENIEVTEAIREYVETKLSKV-EKYFNEAQELDTRVNLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V
Sbjct: 56 VTILIDSI-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQV 109
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
E E P DEE + + +VRTK ++ P+ V EA+ Q+E++ HDF+ +
Sbjct: 110 FTT--------EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIY 157
[100][TOP]
>UniRef100_Q030Z0 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Lactococcus lactis subsp. cremoris SK11
RepID=Q030Z0_LACLS
Length = 185
Score = 81.3 bits (199), Expect = 6e-14
Identities = 55/179 (30%), Positives = 95/179 (53%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++DA++ +VEDK+G+ + K+ EV ++ + E + + E
Sbjct: 2 IKFNIRGENVEVTDAIRDYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTE-----KRAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VTL K + +RAE+ ++ Y SID V ++R++RK K + R+ P F +
Sbjct: 56 VTLPAK-NVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQVFGDE 113
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
PL + DE E + ++VRTK+ + P+ EA+ Q++M+ HDFY F
Sbjct: 114 FAPLDTTDEVAEDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVF 160
[101][TOP]
>UniRef100_A2RIX0 Putative Sigma 54 modulation protein n=2 Tax=Lactococcus lactis
RepID=A2RIX0_LACLM
Length = 185
Score = 80.9 bits (198), Expect = 8e-14
Identities = 55/179 (30%), Positives = 95/179 (53%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++DA++ +VEDK+G+ + K+ EV ++ + E + + E
Sbjct: 2 IKFNIRGENVEVTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTE-----KRAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VTL K + +RAE+ ++ Y SID V ++R++RK K + R+ P F +
Sbjct: 56 VTLPAK-NVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQVFGDE 113
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
PL + DE E + ++VRTK+ + P+ EA+ Q++M+ HDFY F
Sbjct: 114 FAPLDTTDEVAEDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVF 160
[102][TOP]
>UniRef100_Q3DA79 Ribosomal subunit interface protein n=2 Tax=Streptococcus
agalactiae RepID=Q3DA79_STRAG
Length = 184
Score = 80.9 bits (198), Expect = 8e-14
Identities = 57/179 (31%), Positives = 101/179 (56%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++++VE K+ +V +K+ +E+D R++ + E +T + E
Sbjct: 2 IKYSIRGENIEVTEAIREYVETKLSKV-EKYFNEEQELDTRVNLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V
Sbjct: 56 VTILIDSI-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQV 109
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
E E P DEE + + +VRTK ++ P+ V EA+ Q+E++ HDF+ +
Sbjct: 110 FTT--------EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIY 157
[103][TOP]
>UniRef100_B1SBZ3 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius
subsp. infantarius ATCC BAA-102 RepID=B1SBZ3_9STRE
Length = 182
Score = 80.1 bits (196), Expect = 1e-13
Identities = 53/179 (29%), Positives = 100/179 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K ++G N+E++DA++ +VE K+G+ I+K+ +E+D R++ + E +T + E
Sbjct: 2 IKYSVRGENIEVTDAIRNYVESKLGK-IEKYFNAEQELDARVNLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV+ I+R++RK K K R +++
Sbjct: 56 VTILVNSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIAKKHREKVPASQI----- 109
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
SE E + ++ P + VVRTK+ + P+ + EA+ Q++++ HDF+ +
Sbjct: 110 ---FTSEFEAEPVDEGPAVN--------VVRTKHVSLKPMDLDEALLQMDLLGHDFFIY 157
[104][TOP]
>UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6FVY1_9CLOT
Length = 194
Score = 79.7 bits (195), Expect = 2e-13
Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 2/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+KL I G+ MEL+ +K ++E K+ ++ Y+ + DV+++ + GR + E
Sbjct: 9 MKLTISGKQMELTQGIKDNIESKLSKL---DKYISPDTDVKVTV--SAKKGR----HKIE 59
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP--NRLKFS 189
VT+ K V+RAEE E Y +IDLV ++ +L+K K+K + K + + +
Sbjct: 60 VTIAPKNGHVIRAEESQENLYPAIDLVVDKLKIQLKKYKDKMQKRHQENKSIRFDSPEIN 119
Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
+ IL ED EDE+ I + R K ++ P++ EA+ Q+E+V HDFY
Sbjct: 120 DSILEEDLEDFEDELFI-------------IKRRKRINIKPMSEEEAVLQMELVGHDFYI 166
Query: 8 FR 3
FR
Sbjct: 167 FR 168
[105][TOP]
>UniRef100_B4U4G1 Ribosomal subunit interface protein n=1 Tax=Streptococcus equi
subsp. zooepidemicus MGCS10565 RepID=B4U4G1_STREM
Length = 182
Score = 79.3 bits (194), Expect = 2e-13
Identities = 58/179 (32%), Positives = 101/179 (56%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +VE K+ + I+K+ + +E+D R++ + E +T + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVVEQEIDARVNLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V
Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR-----EKMSTSQV 109
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
SE E ++ E TP+ +VVRTK + P+ V EA Q+E++ HDF+ +
Sbjct: 110 ---FTSEFEAEQAEETPE--------IKVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157
[106][TOP]
>UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH
Length = 178
Score = 79.3 bits (194), Expect = 2e-13
Identities = 55/180 (30%), Positives = 94/180 (52%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
++ II G+N+++++ +K + +K+G+ ++K+ E+ V LS + + E
Sbjct: 1 MRYIISGKNIDVTEGLKSAIYEKIGK-LEKYFNPEAEIHVTLSVEKDRQ--------KIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K + +VRAE+ + Y SIDLV +I+R+L+K K K D + N F +V
Sbjct: 52 VTIPMKGN-IVRAEQVSNDMYASIDLVEEVIERQLKKYKSKLKDMNQSAANFNPSFFEDV 110
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
L + +E++I IT R K F M P+ EA Q+E++ H+FY FR
Sbjct: 111 ---LNEDSDEEDINIT--------------RVKRFAMKPMDAEEACVQMELLGHNFYVFR 153
[107][TOP]
>UniRef100_A7NNI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Roseiflexus castenholzii DSM 13941
RepID=A7NNI5_ROSCS
Length = 198
Score = 79.3 bits (194), Expect = 2e-13
Identities = 56/180 (31%), Positives = 89/180 (49%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+ LI+ RN +LSD +QH+E K+ R+ + YL R V + G R +
Sbjct: 6 MNLIVNSRNGKLSDRQRQHIEQKLSRLDR---YLDRIDKVTVEHMEEMRRNEG-NVHRVQ 61
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +VRAE A Y +ID V +QR++ + K+K GR R + ++
Sbjct: 62 VTVVGDHGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDKHWRRGRL-----RRQGGQI 116
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
+ LP + P DEEE +VRTK F + P+ EA++Q+E++ H F+ F+
Sbjct: 117 VEALPEMNAA-----APAPIDEEEQRPRIVRTKEFQVKPMYSDEAVEQMELLGHSFFIFQ 171
[108][TOP]
>UniRef100_C0MH43 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Steptococcus equi subsp. zooepidemicus H70
RepID=C0MH43_STRS7
Length = 182
Score = 79.0 bits (193), Expect = 3e-13
Identities = 58/179 (32%), Positives = 101/179 (56%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E +T + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V
Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR-----EKVSTSQV 109
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
SE E +++E TP+ +VVRTK + P+ V EA Q+E++ HDF+ +
Sbjct: 110 ---FTSEFEAEQVEETPE--------IKVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157
[109][TOP]
>UniRef100_A8S366 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
BAA-613 RepID=A8S366_9CLOT
Length = 187
Score = 79.0 bits (193), Expect = 3e-13
Identities = 63/191 (32%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
Frame = -1
Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGG 399
+S+S + L ++ I GRN+E++ +K VE K+G++ +H + EV V LS +
Sbjct: 1 MSLSQEKELMFMRYTITGRNIEVTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDR 58
Query: 398 EFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 219
+ + EVT+ K + +RAEE + Y SIDLV II+R++R+ ++K D
Sbjct: 59 Q--------KIEVTIPVKGN-TIRAEESSTDMYVSIDLVEEIIERQIRRYRKKLID---- 105
Query: 218 MKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQ 39
K + FS+ + +EEDE++ DDE ++V+TK F + P EA Q
Sbjct: 106 -KKQAAISFSQAFI-----EEEDEVQ-----DDE----IQIVKTKKFAIKPTIPEEACLQ 150
Query: 38 LEMVDHDFYAF 6
+EM+ H+FY F
Sbjct: 151 MEMLGHNFYVF 161
[110][TOP]
>UniRef100_C7QZG8 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Jonesia
denitrificans DSM 20603 RepID=C7QZG8_JONDD
Length = 219
Score = 78.6 bits (192), Expect = 4e-13
Identities = 51/190 (26%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+++++ GR+ E++D ++H E+K+ ++ Q ++ R VDV ++ + R+ R E
Sbjct: 1 MEIVVVGRHTEVADRFREHAEEKLSKIAQ-YAPTARRVDVEVTHEYNPR--QSARSERVE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH----MKGPNRLK 195
+T+ K V+RAE ++ +G++DL +Q +LR+ E++ R ++ P L
Sbjct: 58 LTVRDKGP-VIRAEAASDDRFGALDLALDKLQERLRRAHERKYTSKRRIPRKLEVPKDLD 116
Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEE-------VVRTKYFDMPPLTVFEAIDQL 36
E+I +E+ P E +E ++R K + P+TV +AID++
Sbjct: 117 AIEMIPDPEPPTQEEATPSVPHPTQPGETVEVQLGDSPVIIRQKLHNASPMTVDDAIDEM 176
Query: 35 EMVDHDFYAF 6
E+V HDF+ F
Sbjct: 177 ELVGHDFFLF 186
[111][TOP]
>UniRef100_B9CNR8 Light-repressed protein n=1 Tax=Atopobium rimae ATCC 49626
RepID=B9CNR8_9ACTN
Length = 195
Score = 78.6 bits (192), Expect = 4e-13
Identities = 55/179 (30%), Positives = 89/179 (49%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
V + I GR + +SDA++ HVE+K+G ++ DV L + E
Sbjct: 2 VDIKISGRKVTVSDALRSHVEEKIGDALKVFDIQPMTCDVVLRVDKNPS---NLERKSVE 58
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT++ R+ VVR + YG+ID + + R+LRK K + D H + S+
Sbjct: 59 VTVFV-RNSVVRVVSSGDDMYGAIDEAAEKVTRQLRKYKTRIVDKHHHAQNTRGRALSQ- 116
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
E+ + IE TP +D +++L+ E KY D+ P+T EA+ Q +++ HDFY F
Sbjct: 117 ------EELANLIE-TPAEDLDDQLVRE----KYIDLLPMTEEEALVQTDLLGHDFYVF 164
[112][TOP]
>UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
13814 RepID=A6BHR0_9FIRM
Length = 178
Score = 78.6 bits (192), Expect = 4e-13
Identities = 60/179 (33%), Positives = 97/179 (54%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K II G+N++++ +++ VE K+G+ + ++ E+ V LS + G + + E
Sbjct: 1 MKFIIIGKNIDVTPGLREAVESKLGK-LGRYFTPNTEIHVTLSVQKGHQ--------KIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K G+VR+E+ + Y SIDLV +I+R+LRK K K R +G N F +
Sbjct: 52 VTIPVKG-GLVRSEQESSDMYVSIDLVEEVIERQLRKYKNKLV--AREQEGGN---FKQE 105
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
D ED IE D+ E+ ++VRTK F P+ +A Q+E++ HDFY F
Sbjct: 106 FF-----DAEDNIE------DDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFYVF 151
[113][TOP]
>UniRef100_Q4L4H7 Uncharacterized protein SH2139 n=1 Tax=Staphylococcus haemolyticus
JCSC1435 RepID=Y2139_STAHJ
Length = 192
Score = 78.6 bits (192), Expect = 4e-13
Identities = 54/180 (30%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
++ I G N+ ++DA++ ++EDK+G++ + + + V V++ T T +
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEDKIGKLERYFNDVPNAVAHVKVKTYQNS-------TTKI 54
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
EVT+ K + +RAEE + Y IDLV+S ++R++RK K + + +H F
Sbjct: 55 EVTIPLK-NVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRV--NRKHKTHGEPEAFVA 111
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ P E+ +D + P D E E+I R+K F + P+ EA+ Q+E++ HDFY F
Sbjct: 112 EVQEAPPENVDD-VNAEPTNDSEIEII----RSKQFSLKPMDSEEAVLQMELLGHDFYIF 166
[114][TOP]
>UniRef100_C5EVT1 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
1_7_47FAA RepID=C5EVT1_9FIRM
Length = 187
Score = 78.2 bits (191), Expect = 5e-13
Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
Frame = -1
Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGG 399
+S+S + L ++ I GRN+E++ +K VE K+G++ +H + EV V LS +
Sbjct: 1 MSLSQEKELMIMRYTITGRNIEVTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDR 58
Query: 398 EFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 219
+ + EVT+ K + +RAEE + Y SIDLV +I+R++R+ ++K D
Sbjct: 59 Q--------KIEVTIPVKGN-TIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID---- 105
Query: 218 MKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQ 39
K + FS+ + +EEDE++ DDE ++V+TK F + P EA Q
Sbjct: 106 -KKQAAISFSQAFI-----EEEDEVQ-----DDE----IQIVKTKKFAIKPTIPEEACLQ 150
Query: 38 LEMVDHDFYAF 6
+EM+ H FY F
Sbjct: 151 MEMLGHSFYVF 161
[115][TOP]
>UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
35704 RepID=B0NJJ3_EUBSP
Length = 179
Score = 78.2 bits (191), Expect = 5e-13
Identities = 53/179 (29%), Positives = 97/179 (54%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K II G+N++++ +K+ VE+K+G+ ++++ E+ V LS + ++ E
Sbjct: 1 MKFIIIGKNIDVTPGLKEAVENKLGK-LERYFTPDTEIHVTLSVQR--------ERQKIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K G++R+E+ + Y SIDLV +I+R+LRK K K RH +G K
Sbjct: 52 VTIPVKG-GIIRSEQESSDMYVSIDLVEEVIERQLRKYKNKLI--ARHQEGSGNFK---- 104
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
++ + + +D+ E+ ++VRTK F P+ +A Q+E++ HDF+ F
Sbjct: 105 ---------QEFFDSGERSEDDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFFVF 152
[116][TOP]
>UniRef100_A8U6N5 Ribosomal subunit interface protein n=1 Tax=Carnobacterium sp. AT7
RepID=A8U6N5_9LACT
Length = 180
Score = 78.2 bits (191), Expect = 5e-13
Identities = 57/180 (31%), Positives = 99/180 (55%), Gaps = 2/180 (1%)
Frame = -1
Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360
K ++G N+E++ A++ +VE KVG+V +K+ V E ++ + + +T + EV
Sbjct: 3 KYNVRGENIEVTAAIRSYVEKKVGKV-EKYFNDVPEATAHVNLKTYSD-----KTAKVEV 56
Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180
T+ + V+RAEE + YGS+DLVS ++R++RK K K R + S V+
Sbjct: 57 TIPLP-YLVLRAEETSPDLYGSVDLVSDKLERQMRKYKTKIN---------RRTRGSNVV 106
Query: 179 LP--LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+P LP E++E E+E+ +VRTK + P+ EA+ Q++M+ H+F+ F
Sbjct: 107 VPPVLPGEEQESH---------EDEV--NIVRTKRLSLKPMDSEEAVLQMDMLGHNFFIF 155
[117][TOP]
>UniRef100_B9ND14 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ND14_POPTR
Length = 102
Score = 78.2 bits (191), Expect = 5e-13
Identities = 46/98 (46%), Positives = 57/98 (58%), Gaps = 14/98 (14%)
Frame = -1
Query: 254 KIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDE--EELI-------- 105
KIK+KE+DHGRHMKG N+ K E P+ E D ++ +KDD+ +EL
Sbjct: 2 KIKDKESDHGRHMKGFNKFKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHLVTIH 58
Query: 104 ----EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
V TKYFDMPP+TV EAI +L VDH FY FR
Sbjct: 59 SIISSNAVHTKYFDMPPVTVDEAIVRLGNVDHAFYGFR 96
[118][TOP]
>UniRef100_B8BRE6 Light-repressed protein a n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BRE6_THAPS
Length = 198
Score = 78.2 bits (191), Expect = 5e-13
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
Frame = -1
Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT 357
+++ G N++L+ A+ +V K+ + + K V DV L+ + P+ +
Sbjct: 7 IVVTGDNIDLTPALSDYVNSKIEKTVGKLPLAVSHCDVYLTVN------KNPKVKDAHTA 60
Query: 356 --LYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFS 189
+ T + R E + Y SIDLV++ + RKLRK KE+ D HG G N +
Sbjct: 61 EVVTTLKGTTFRVAESSPDMYASIDLVAARLARKLRKYKERRLDGYHGGPNMGEN---IA 117
Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
EV+ + ++ ED E D ++ ++ +V T P+++ EAI L+ +DHDFY
Sbjct: 118 EVLNAIEVDESEDGAEEESYIDPDQAVVTKVKST------PISIKEAIFALDYIDHDFYV 171
Query: 8 FR 3
FR
Sbjct: 172 FR 173
[119][TOP]
>UniRef100_Q5KV92 Ribosomal protein S30EA n=1 Tax=Geobacillus kaustophilus
RepID=Q5KV92_GEOKA
Length = 183
Score = 77.4 bits (189), Expect = 8e-13
Identities = 55/175 (31%), Positives = 103/175 (58%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
++G N+E++ A++++VE K+G+ ++++ +V V ++ + + G+G + EVT+
Sbjct: 5 VRGENLEVTPALREYVEKKIGK-LERYFDGTEDVHVHVNLKVYND-GQG----KIEVTI- 57
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
H ++RAEE E Y +IDLV+ ++R++RK K K + K +R K +++ P+
Sbjct: 58 PMPHLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKEAKLAAPV 112
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
PS E ++EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F
Sbjct: 113 PSGASAAE-------NNEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 158
[120][TOP]
>UniRef100_C0M6F8 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Streptococcus equi subsp. equi 4047
RepID=C0M6F8_STRE4
Length = 182
Score = 77.4 bits (189), Expect = 8e-13
Identities = 58/179 (32%), Positives = 100/179 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E +T + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V
Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR-----EKMSTSQV 109
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
SE E ++ E TP+ +VVRTK + P+ V EA Q+E++ HDF+ +
Sbjct: 110 ---FTSEFEAEKAEETPE--------IKVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157
[121][TOP]
>UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
ATCC 43255 RepID=UPI00017F5ACC
Length = 185
Score = 77.0 bits (188), Expect = 1e-12
Identities = 53/180 (29%), Positives = 96/180 (53%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+++I+ GR M+L+D +K +V+ K+ R+ YL E +V+++ + ++ E
Sbjct: 1 MQIIVSGRQMKLTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F
Sbjct: 52 VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFEN- 107
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
L D E + ++DE +IE R K F++ P++ EAI Q+E+V H+FY FR
Sbjct: 108 ---LDFIDNSSEFDDYDDEEDENIVIE---RRKKFNVKPMSSEEAILQMELVGHNFYMFR 161
[122][TOP]
>UniRef100_Q5M196 Ribosomal subunit interface protein, ribosomal protein S30AE family
n=2 Tax=Streptococcus thermophilus RepID=Q5M196_STRT1
Length = 182
Score = 77.0 bits (188), Expect = 1e-12
Identities = 60/179 (33%), Positives = 99/179 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +VE K+ +V +K+ + +E+ R++ + E +T + E
Sbjct: 2 IKCSIRGENIEVTEALRDYVESKLSKV-EKYFHEDQELHARVNLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ T +RAE+ + YGSIDLV I R++RK K K R K P FS
Sbjct: 56 VTIPTGSV-TLRAEDVSLDMYGSIDLVVDKIARQIRKNKTKIARKYRE-KVPTGEMFS-- 111
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+E ++E+E P EVVRTK ++ P+ V EAI Q+E++ HDF+ +
Sbjct: 112 -----TEFNKEEVEEAPAV--------EVVRTKNIELKPMDVEEAILQMELLGHDFFIY 157
[123][TOP]
>UniRef100_A9W9Y4 Ribosomal subunit interface protein n=2 Tax=Chloroflexus
RepID=A9W9Y4_CHLAA
Length = 197
Score = 77.0 bits (188), Expect = 1e-12
Identities = 52/184 (28%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS---TRGGGEFGRGPRTR 372
++L I+ RN ++SD + H+E+K+ + ++++ + + + V + R GE
Sbjct: 1 MELTIKSRNGKISDRQRAHIEEKLSK-LERYLHGITSITVEVQHEQQRNAGE------VY 53
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM-KGPNRLK 195
R + TL + ++RAEE A Y +ID V ++QR++ + K+K R + PN L
Sbjct: 54 RVQTTLVAEHGVILRAEERAPDLYAAIDEVQEVLQRQIARYKDKYWRRSREQRRAPNGLT 113
Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
+E + + E TP + E V+RTK F + P+ V +AI+Q+E++ H+F
Sbjct: 114 PAEEV---AIAEAEAAALATPTEVGSE---ARVIRTKTFRLRPMFVDDAIEQMELLGHNF 167
Query: 14 YAFR 3
+ F+
Sbjct: 168 FVFQ 171
[124][TOP]
>UniRef100_A3CPW1 30S ribosomal interface protein S30EA, putative n=1
Tax=Streptococcus sanguinis SK36 RepID=A3CPW1_STRSV
Length = 180
Score = 77.0 bits (188), Expect = 1e-12
Identities = 57/179 (31%), Positives = 101/179 (56%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++DA++ +V K+ + I+K+ +E+D R++ + E +T + E
Sbjct: 2 LKYSIRGENLEVTDALRDYVVSKLEK-IEKYFQAEQELDARVNLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV+ I+R++RK K K ++ NR K +
Sbjct: 56 VTIPLGSI-TLRAEDISQDMYGSIDLVTDKIERQIRKNKTK-------IERKNRNKVATS 107
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
L S EE EE+ +VVR+K+ D+ P+ + EAI Q++++ HDF+ +
Sbjct: 108 QLFTDSFAEE-----------AEEVPSKVVRSKHIDLKPMDLEEAILQMDLLGHDFFIY 155
[125][TOP]
>UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile
RepID=C9XLM7_CLODI
Length = 187
Score = 77.0 bits (188), Expect = 1e-12
Identities = 52/180 (28%), Positives = 98/180 (54%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+++I+ GR M+L+D +K +V+ K+ R+ YL E +V+++ + ++ E
Sbjct: 1 MQIIVSGRQMKLTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F +
Sbjct: 52 VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENL 108
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
+ + E D+ + DDEE+ + R K F++ P++ EAI Q+E+V H+FY FR
Sbjct: 109 DF-IDNSSEFDDYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 163
[126][TOP]
>UniRef100_C7ML59 Ribosomal subunit interface protein n=1 Tax=Cryptobacterium curtum
DSM 15641 RepID=C7ML59_CRYCD
Length = 188
Score = 77.0 bits (188), Expect = 1e-12
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 3/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRG-PRTR 372
+++ + GR M ++DA+K + E+K+G ++ L+ EV + + E R R
Sbjct: 1 MEISVTGRKMPVTDALKSYAEEKIGNSMKVMDIDPLIAEVILHV------EQNRAIARPA 54
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
CEVT+ K H ++R EEH E Y +ID+ ++ + R+LRK K + + +
Sbjct: 55 ICEVTMTAKGH-IIRVEEHEEDMYAAIDVAAAKVLRQLRKFKTRVVERNTRTDAASIRSA 113
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
L L + EE DDE VVR K D+ PLT EA+ +++++ HDF+
Sbjct: 114 KSAKLDLDALMEE-------LSDDE------VVREKSIDLQPLTEEEALVEIDLLGHDFF 160
Query: 11 AF 6
A+
Sbjct: 161 AY 162
[127][TOP]
>UniRef100_C5R7Z6 Ribosome-associated inhibitor protein Y n=1 Tax=Weissella
paramesenteroides ATCC 33313 RepID=C5R7Z6_WEIPA
Length = 238
Score = 77.0 bits (188), Expect = 1e-12
Identities = 57/199 (28%), Positives = 107/199 (53%), Gaps = 4/199 (2%)
Frame = -1
Query: 587 GAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQ----KHSYLVREVDVR 420
G S S G ++ ++G N+E++DA+ +++E ++ R+ + + SY+ R V+VR
Sbjct: 35 GILSYKFSQTGDRIMLEFKVRGENIEITDAMSEYIEKRISRLERYLNTEASYIAR-VNVR 93
Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240
G T + EVT+ + ++RAE+ Y ++D VS ++R++RK K K
Sbjct: 94 SYKEG---------TFKTEVTIQLP-YLLLRAEDTQTDMYQTVDFVSDKLERQIRKYKTK 143
Query: 239 ETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLT 60
R KG L+ ++ + P+ E+ P+ +D+ E+VRTK+ D+ P+
Sbjct: 144 VNRKSRE-KGYKGLENTDFMAVDPAAAVEE-----PEPEDDGL---EIVRTKHVDLKPMD 194
Query: 59 VFEAIDQLEMVDHDFYAFR 3
V EA+ Q+E++ H+F+ F+
Sbjct: 195 VEEAVLQMELLGHEFFIFQ 213
[128][TOP]
>UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
49176 RepID=C4G2X0_ABIDE
Length = 175
Score = 77.0 bits (188), Expect = 1e-12
Identities = 52/180 (28%), Positives = 92/180 (51%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K II GR ++D ++ +E+K+G++ Y + +V ++ + + ++ E
Sbjct: 1 MKYIINGRGTNVTDGLRNAIEEKLGKL---EHYFTPDTEVHVTLKVEKD------RQKVE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K H ++RAE+ ++ Y SIDL+ II+R+LR+ K K D + F+
Sbjct: 52 VTVPVKGH-IIRAEQVSDDMYVSIDLIEDIIERQLRRYKTKIVDSKQSASN-----FTSA 105
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
+ Q DD E+ +V+RTK F + P+ EA Q+E+++H FY FR
Sbjct: 106 FM---------------QDDDYEDEDVKVIRTKRFAVKPMDPEEACVQMELLNHSFYVFR 150
[129][TOP]
>UniRef100_C2LVK8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus hominis
SK119 RepID=C2LVK8_STAHO
Length = 191
Score = 77.0 bits (188), Expect = 1e-12
Identities = 50/183 (27%), Positives = 97/183 (53%), Gaps = 4/183 (2%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
++ I G N+ ++DA++ ++E+K+G++ + + + V V++ T +
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYQNS-------ATKI 54
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
EVT+ K + +RAEE + Y IDLV+S ++R++RK K + R P
Sbjct: 55 EVTIPLK-NVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKNRDNGEPE------ 107
Query: 185 VILPLPSEDE---EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
P +E + +++E T + +E E+ E++R+K F + P+ EA+ Q++++ HDF
Sbjct: 108 ---PFIAEQQTVVNEDVEATSESSNENEI--EIIRSKQFSLKPMDSEEAVLQMDLLGHDF 162
Query: 14 YAF 6
Y F
Sbjct: 163 YIF 165
[130][TOP]
>UniRef100_C0U8U2 SSU ribosomal protein S30P n=1 Tax=Geodermatophilus obscurus DSM
43160 RepID=C0U8U2_9ACTO
Length = 228
Score = 77.0 bits (188), Expect = 1e-12
Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 4/183 (2%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRC 366
++++++GRN+E+ + +QHVEDKVG+ + L + +DV L + + +R
Sbjct: 1 MEIVVRGRNVEVPEHYRQHVEDKVGQSDRFDGKLKILRIDVELFHEKNPR--QSGKCQRV 58
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMKGPNRLKFS 189
E+TL K VVRAE A Y ++DL + + +LRK ++ HGR R+
Sbjct: 59 EITLRGKGP-VVRAEAAAPDFYAALDLAAGKLDHRLRKAADRRRVHHGRRTPASVRVGGG 117
Query: 188 EVILPLP-SEDEEDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
+ S D + E+ P D +E L ++VR K+ P+ V +A+ ++E+V HDF
Sbjct: 118 APDTDVTESFDRDRELAEGPHVTDLDEHLPGQIVREKHHPATPMHVDQALHEMELVGHDF 177
Query: 14 YAF 6
+ F
Sbjct: 178 FLF 180
[131][TOP]
>UniRef100_B0G387 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC
27755 RepID=B0G387_9FIRM
Length = 177
Score = 77.0 bits (188), Expect = 1e-12
Identities = 54/179 (30%), Positives = 97/179 (54%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K II G+N++++ +K VE K+G+ +Q++ E+ V LS + ++ E
Sbjct: 1 MKFIIIGKNIDVTPGLKDAVESKLGK-LQRYFTPDTEIHVTLSVQ--------KEHQKIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K + ++R+E+ ++ Y SIDLV +I+R+LRK K K ++ +G N FS+
Sbjct: 52 VTIPVKGN-IIRSEQESDDMYVSIDLVEEVIERQLRKYKNKLV--AKNQEGNN---FSKT 105
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ E+DE++I VRTK F + P+ +A Q+E++ H+F+ F
Sbjct: 106 LFETEESIEDDEVKI--------------VRTKRFGIKPMYPEDACVQMELLGHNFFVF 150
[132][TOP]
>UniRef100_C2LQ50 Ribosomal subunit interface protein, ribosomal protein S30AE family
n=1 Tax=Streptococcus salivarius SK126
RepID=C2LQ50_STRSL
Length = 182
Score = 76.6 bits (187), Expect = 1e-12
Identities = 58/179 (32%), Positives = 100/179 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +VE K+ +V +K+ +E++ R++ + E +T + E
Sbjct: 2 IKYSIRGENIEVTEALRDYVESKLSKV-EKYFNEDQELNARVNLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ T +RAE+ ++ YGSIDLV I+R++RK K K R K P FS
Sbjct: 56 VTIPTGSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIARKHRE-KVPTGEVFS-- 111
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
++ +++E P EVVRTK ++ P+ V EAI Q+E++ HDF+ +
Sbjct: 112 -----ADFNNEQVEEAPAV--------EVVRTKNIELKPMDVEEAILQMELLGHDFFIY 157
[133][TOP]
>UniRef100_UPI0001BB5516 ribosomal subunit interface protein n=1 Tax=Streptococcus sp.
2_1_36FAA RepID=UPI0001BB5516
Length = 180
Score = 76.3 bits (186), Expect = 2e-12
Identities = 53/179 (29%), Positives = 102/179 (56%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +V K+ + I+K+ +E+D R++ + E +T + E
Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQADQELDARVNLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R +++ F++V
Sbjct: 56 VTIPLGSI-TLRAEDISQDMYGSIDLVVDKIERQIRKNKTKIERKNRTKVSTSQI-FTDV 113
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
++ +E++ P K VVR+K+ D+ P+ + EA+ Q+E++ HDF+ +
Sbjct: 114 VV--------EEVDEAPAK---------VVRSKHIDLKPMDLEEALLQMELLGHDFFIY 155
[134][TOP]
>UniRef100_B8GDB0 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Chloroflexus aggregans DSM 9485 RepID=B8GDB0_CHLAD
Length = 197
Score = 76.3 bits (186), Expect = 2e-12
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKV---GRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 372
++ I+ RN ++S+ ++H+E+K+ GR + + + EV G +
Sbjct: 1 MEFTIKSRNGKISERQREHIEEKLAKLGRYLNGITSITVEVQHEQQRNVGEVY------- 53
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM-KGPNRLK 195
R + TL + ++RAEE A Y +ID V ++QR++++ K+K R + + N L
Sbjct: 54 RVQTTLVAEHGVILRAEERAADLYAAIDAVQEVLQRQIQRYKDKYWRRSRELRRATNGLT 113
Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
+E + +E E + E E + +V+RTK F + P+ V +AI+Q+E++ H F
Sbjct: 114 PAEEVAIAEAETEAMTAPV------ETEPVAKVIRTKTFRLRPMFVDDAIEQMELLGHTF 167
Query: 14 YAFR 3
+ F+
Sbjct: 168 FVFQ 171
[135][TOP]
>UniRef100_C0BYR7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
15053 RepID=C0BYR7_9CLOT
Length = 178
Score = 76.3 bits (186), Expect = 2e-12
Identities = 55/179 (30%), Positives = 94/179 (52%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K II G+N++++ +++ VE K+G+ ++K+ E+ V LS ++ E
Sbjct: 1 MKFIISGKNIDVTPGLRETVEHKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K + ++R+E+ + Y SIDLV +I+R+LRK K K RH +G N
Sbjct: 52 VTIPVKGN-IIRSEQVSSDMYVSIDLVEEVIERQLRKYKNKLV--ARHQEGGN------- 101
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
E E E + DDE ++VRTK F + P+ +A Q++++ HDF+ F
Sbjct: 102 -----FRQEFFESEYATEDDDE----VKIVRTKRFGIKPMYPEDACIQMDLLGHDFFVF 151
[136][TOP]
>UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
ATCC 43243 RepID=B7AN97_9BACE
Length = 179
Score = 76.3 bits (186), Expect = 2e-12
Identities = 53/179 (29%), Positives = 93/179 (51%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
++ +I GRN+E++D +K+ VE+K+G+ + + EV V LS ++ E
Sbjct: 4 MRFVIVGRNIEVTDGLKEAVEEKLGK-LDRFFAPDTEVKVTLSVE--------KERQKIE 54
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K ++R+E+ + Y SIDLV +I+R+L+K K K D K + F++
Sbjct: 55 VTIPVKG-SIIRSEQVSNDMYVSIDLVEEVIERQLKKYKNKLID-----KQQDAAAFAQE 108
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ D++ +++I +RTK FD+ P+ EA Q+E++ H FY F
Sbjct: 109 YIDKEYVDDDADVKI--------------IRTKRFDVKPMDPEEACVQMELLGHSFYVF 153
[137][TOP]
>UniRef100_C5WIE9 Ribosome-associated factor Y n=1 Tax=Streptococcus dysgalactiae
subsp. equisimilis GGS_124 RepID=C5WIE9_STRDG
Length = 182
Score = 75.9 bits (185), Expect = 2e-12
Identities = 56/179 (31%), Positives = 100/179 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E ++ + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KSSKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R K P F+
Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-- 111
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+E E ++++ TP+ +VVRTK + P+ V EA Q+E++ HDF+ +
Sbjct: 112 -----TEFEAEQVDETPE--------VKVVRTKNLTLKPMDVEEARLQMELLGHDFFIY 157
[138][TOP]
>UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale
ATCC 33656 RepID=C4ZI34_EUBR3
Length = 175
Score = 75.9 bits (185), Expect = 2e-12
Identities = 57/180 (31%), Positives = 96/180 (53%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+++ I G+N+EL++ +KQ VE+K+ + ++K +V V LS + + E
Sbjct: 1 MRITISGKNIELTEGLKQAVEEKLSK-LEKFFKPDTDVYVTLSVEKDRQ--------KIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K H V+R+E+ + Y SIDLV +I+R+LRK + K + K++
Sbjct: 52 VTIPAKGH-VIRSEQVSNDMYVSIDLVEEVIERQLRKYRTKISAK----------KYAPA 100
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
I ++D +E DD E+ ++VRTK F M P+ +A Q+E+ HDF+ FR
Sbjct: 101 IF------QDDFVEA----DDAEDEEIKIVRTKRFGMKPMYPEDACIQMELSGHDFFVFR 150
[139][TOP]
>UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
27758 RepID=C0BAM2_9FIRM
Length = 189
Score = 75.9 bits (185), Expect = 2e-12
Identities = 59/182 (32%), Positives = 93/182 (51%)
Frame = -1
Query: 551 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 372
LS + II GRN++++ ++Q VE K+G++ Y E D+ ++ E +
Sbjct: 9 LSCMNFIISGRNIDITPGLRQAVEQKLGKL---EKYFTPETDIIVTLSVEKE------RQ 59
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
+ EVT+ K + ++R+E+ + Y SIDLV II+R+LRK K K +G + +
Sbjct: 60 KIEVTIPVKGN-IIRSEQESSDMYVSIDLVEEIIERQLRKYKTKLI---AKQQGGHDFR- 114
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
E I S E DEIEI VRTK F + P+ +A Q+E++ H+FY
Sbjct: 115 QEFIESDTSAAESDEIEI--------------VRTKRFGIKPMFPEDACIQMELLGHNFY 160
Query: 11 AF 6
F
Sbjct: 161 VF 162
[140][TOP]
>UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
27756 RepID=A5KKP2_9FIRM
Length = 198
Score = 75.9 bits (185), Expect = 2e-12
Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
Frame = -1
Query: 551 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 372
L+S+ II G+N+E++ +K+ +E K+G+ ++++ E+ V LS G +
Sbjct: 11 LNSMNFIISGKNIEVTPGLKEAIEQKLGK-LERYFTPETEIIVTLSVEKGRQ-------- 61
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
+ EVT+ K ++R+E+ + Y SIDLV +I+R+LRK K K +
Sbjct: 62 KIEVTIPVKG-SIIRSEQTSSDMYVSIDLVEEVIERQLRKYKNKLVAKSQ---------- 110
Query: 191 SEVILPLPSEDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
+PS + E IE + D++E+ +VRTK F + P+ +A Q+E++ H F
Sbjct: 111 GHPTAAVPSGSIKKEFIESDDESSDDDEI--RIVRTKKFGIKPMFPEDACIQMELLGHSF 168
Query: 14 YAF 6
+ F
Sbjct: 169 FVF 171
[141][TOP]
>UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F60C6
Length = 185
Score = 75.5 bits (184), Expect = 3e-12
Identities = 53/180 (29%), Positives = 95/180 (52%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+++I+ GR M+L+D +K +V+ K+ R+ YL E +V+++ + ++ E
Sbjct: 1 MQIIVSGRQMKLTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F V
Sbjct: 52 VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENV 108
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
S + +D DDEE + R K F++ P++ EAI Q+E+V H+FY FR
Sbjct: 109 DFIDNSSEFDDY-------DDEEYENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 161
[142][TOP]
>UniRef100_UPI00004C2450 COG1544: Ribosome-associated protein Y (PSrp-1) n=1
Tax=Streptococcus pyogenes M49 591 RepID=UPI00004C2450
Length = 182
Score = 75.5 bits (184), Expect = 3e-12
Identities = 57/179 (31%), Positives = 99/179 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E R+ + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R K P F+
Sbjct: 56 VTIPLDSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-- 111
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+E E +E++ P+ +VVRTK + P+ V EA Q+E++ HDF+ +
Sbjct: 112 -----TEFEAEEVDEIPE--------VQVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157
[143][TOP]
>UniRef100_B9MLV8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Anaerocellum thermophilum DSM 6725
RepID=B9MLV8_ANATD
Length = 181
Score = 75.5 bits (184), Expect = 3e-12
Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 2/181 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+ II G+N+E++DA+K+ +E K+ + ++++ L +V V LS E
Sbjct: 1 MNFIISGKNIEVTDALKERIEKKLSK-LERYIKLNTDVHVTLSVEKISHI--------VE 51
Query: 362 VTLYTKRHGVV-RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ HG++ RAEE + Y +IDLV ++R++RK K K R K +E
Sbjct: 52 VTI--PFHGMILRAEERSNDMYSAIDLVVDTLERQIRKFKTKIA---------KRAKDAE 100
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
+ + E EE P+K+ +EE E + +TK F + P++V EAI Q+ ++ H+F+
Sbjct: 101 SLRYMTFELEE------PEKEVQEENSEFRIAKTKRFPIKPMSVEEAILQMNLLGHNFFV 154
Query: 8 F 6
F
Sbjct: 155 F 155
[144][TOP]
>UniRef100_B9DV32 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Streptococcus uberis 0140J RepID=B9DV32_STRU0
Length = 182
Score = 75.5 bits (184), Expect = 3e-12
Identities = 59/179 (32%), Positives = 97/179 (54%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +VE K+ + I+K+ E+D R++ + E +T + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVEAKLAK-IEKYFVEDSEIDTRVNLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ ++RAE+ ++ YGSIDLV I+R++RK K K R K P F
Sbjct: 56 VTIILGSM-ILRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFR-- 111
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
SE E +E+ EE +VVRTK + P+ V EA Q+E++ HDF+ +
Sbjct: 112 -----SEFETEEV--------EEGSEVKVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157
[145][TOP]
>UniRef100_A7GUW3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GUW3_BACCN
Length = 179
Score = 75.5 bits (184), Expect = 3e-12
Identities = 62/180 (34%), Positives = 99/180 (55%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + I+++ EV V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-IERYFDTFPEVKVNLKVYSDKQ--------RVE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 52 VTIPFTDL--LLRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSAKTAFI- 107
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
LP + ++E++ E+EL E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 108 ----LPDQLGQEEVQ-------EDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 154
[146][TOP]
>UniRef100_C2QJQ3 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Bacillus cereus R309803 RepID=C2QJQ3_BACCE
Length = 180
Score = 75.5 bits (184), Expect = 3e-12
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+G+ ++++ E+ V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLGK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
[147][TOP]
>UniRef100_C0VBX3 SSU ribosomal protein S30P n=1 Tax=Xylanimonas cellulosilytica DSM
15894 RepID=C0VBX3_9MICO
Length = 216
Score = 75.5 bits (184), Expect = 3e-12
Identities = 55/183 (30%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+++++ GR+ ++ + ++HVEDK+ +V Q S LV+ VDV ++ + R E
Sbjct: 1 MEIVVVGRHTDVPERFRRHVEDKLTKVTQL-SPLVQRVDVEVTHENNPKLS--DVRERVE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLK-FS 189
+T+ K V+RAE A+ YG++DL + +LR+ +++ DH R ++ P ++ +
Sbjct: 58 LTVRAKGP-VIRAEAAADDRYGALDLAIDKLIERLRRSRDRRKDHRRTYVTAPVDVRPYD 116
Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEE--VVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
EV P P E EE + + E +L + V+R K +TV +A+ ++E+V HDF
Sbjct: 117 EVRSPEP-EPEESVPLVVDGEAVEHQLGDSPVVIRQKLHSADAMTVDDAVYEMELVGHDF 175
Query: 14 YAF 6
+ F
Sbjct: 176 FLF 178
[148][TOP]
>UniRef100_A6CQE4 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. SG-1
RepID=A6CQE4_9BACI
Length = 189
Score = 75.5 bits (184), Expect = 3e-12
Identities = 53/175 (30%), Positives = 91/175 (52%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
I+G N+E++ A++ HVE+K+G+ + ++ + DV ++ + + + + EVT+
Sbjct: 6 IRGENIEVTPAIRDHVENKIGK-LNRYFNETPDADVHVNLKVYPD-----KKTKVEVTI- 58
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
H V+RAEE E Y +IDL+ ++R++RK K K R P ++ L
Sbjct: 59 PMPHLVLRAEERHEDMYAAIDLIVDKLERQIRKHKTKVNRKMREKGSPKEFFAAQEGLTT 118
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+E K E E +EVVRTK F++ P+ EAI Q+ ++ H F+ F
Sbjct: 119 SQLNE---------KARETEENDEVVRTKQFNLKPMDSEEAILQMNLLGHSFFIF 164
[149][TOP]
>UniRef100_Q5XAQ7 Ribosome-associated factor Y n=10 Tax=Streptococcus pyogenes
RepID=RAFY_STRP6
Length = 182
Score = 75.5 bits (184), Expect = 3e-12
Identities = 57/179 (31%), Positives = 99/179 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E R+ + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R K P F+
Sbjct: 56 VTIPLDSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-- 111
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+E E +E++ P+ +VVRTK + P+ V EA Q+E++ HDF+ +
Sbjct: 112 -----TEFEAEEVDEIPE--------VQVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157
[150][TOP]
>UniRef100_Q04E96 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Oenococcus oeni PSU-1 RepID=Q04E96_OENOB
Length = 190
Score = 75.1 bits (183), Expect = 4e-12
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVE---DKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360
I+G NM +DA+ +++ +K+ I + + + ++VR +T + EV
Sbjct: 6 IRGENMSTTDAINNYIKLRLEKLNNYIDQKNNPIAHINVRKYNE---------KTFKIEV 56
Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180
T+ + +RAEE Y ++DLVS+ + R++RK K + R +G + F+E I
Sbjct: 57 TIPLP-YLTLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGIDFNEAI 114
Query: 179 LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
P+PS+ ED+ K D V+R K + P+ + EA+ Q+EM+DHDF+ F
Sbjct: 115 DPVPSDTNEDK------KID-------VIRRKNLSLKPMDIEEAVLQMEMLDHDFFLF 159
[151][TOP]
>UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens
ATCC 27750 RepID=C4Z2Z4_EUBE2
Length = 175
Score = 75.1 bits (183), Expect = 4e-12
Identities = 53/179 (29%), Positives = 93/179 (51%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
++ II GRN+++++ +K VE+K+G+ + + EV+V LS ++ E
Sbjct: 1 MRFIITGRNIDITEGLKSAVEEKLGK-LDRFFAPETEVNVTLSVE--------KERQKIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K + ++R+E+ + Y SIDLV +I+R+L+K K K D K N F++
Sbjct: 52 VTIPVKGN-IIRSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVD-----KQQNAAAFAQE 105
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ +D+E +I +RTK F + P+ EA Q+E++ H+FY F
Sbjct: 106 FVEKDYDDDEVKI----------------IRTKRFGIKPMDPEEACVQMELLGHNFYVF 148
[152][TOP]
>UniRef100_C6SS06 Putative ribosome-associated protein n=2 Tax=Streptococcus mutans
RepID=C6SS06_STRMN
Length = 182
Score = 75.1 bits (183), Expect = 4e-12
Identities = 55/179 (30%), Positives = 96/179 (53%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++DA++ +VE K+ + I+K+ +E+D R++ + E +T + E
Sbjct: 2 IKYSIRGENIEVTDAIRNYVESKLKK-IEKYFNAEQELDARINLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R K +
Sbjct: 56 VTI-PLAPVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHREKKPAAHV----- 109
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+E E +E+E P +VVRTK + P+ + EA Q++++ HDF+ +
Sbjct: 110 ---FTAEFEAEEMEEAP--------AIKVVRTKNITLKPMDIEEARLQMDLLGHDFFIY 157
[153][TOP]
>UniRef100_A0NI00 Ribosomal subunit interface protein n=1 Tax=Oenococcus oeni ATCC
BAA-1163 RepID=A0NI00_OENOE
Length = 190
Score = 75.1 bits (183), Expect = 4e-12
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVE---DKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360
I+G NM +DA+ +++ +K+ I + + + ++VR +T + EV
Sbjct: 6 IRGENMSTTDAINNYIKLRLEKLNNYIDQKNNPIAHINVRKYNE---------KTFKIEV 56
Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180
T+ + +RAEE Y ++DLVS+ + R++RK K + R +G + F+E I
Sbjct: 57 TIPLP-YLTLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGIDFNEAI 114
Query: 179 LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
P+PS+ ED+ K D V+R K + P+ + EA+ Q+EM+DHDF+ F
Sbjct: 115 DPVPSDTNEDK------KID-------VIRRKTLSLKPMDIEEAVLQMEMLDHDFFLF 159
[154][TOP]
>UniRef100_Q03M66 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Streptococcus thermophilus LMD-9 RepID=Q03M66_STRTD
Length = 182
Score = 74.7 bits (182), Expect = 5e-12
Identities = 59/179 (32%), Positives = 98/179 (54%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +VE K+ +V +K+ + +E+ R++ + E +T + E
Sbjct: 2 IKYSIRGENIEVTEALRDYVESKLSKV-EKYFHEDQELHARVNLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ T +RAE+ + YGSIDLV I R++RK K K R K P FS
Sbjct: 56 VTIPTGSV-TLRAEDVSLDMYGSIDLVVDKIARQIRKNKTKIARKYRE-KVPTGEMFS-- 111
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+E ++E+E P EVVR K ++ P+ V EAI Q+E++ HDF+ +
Sbjct: 112 -----TEFNKEEVEEAPAV--------EVVRIKNIELKPMDVEEAILQMELLGHDFFIY 157
[155][TOP]
>UniRef100_A8AVW6 Ribosomal subunit interface protein n=1 Tax=Streptococcus gordonii
str. Challis RepID=A8AVW6_STRGC
Length = 180
Score = 74.7 bits (182), Expect = 5e-12
Identities = 52/179 (29%), Positives = 101/179 (56%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +V K+ + I+K+ +E+D R++ + E +T + E
Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQADQELDARVNLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R +++ F++
Sbjct: 56 VTIPLGSI-TLRAEDISQDMYGSIDLVVDKIERQIRKNKTKIERKNRTKVSTSQI-FTDA 113
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
++ +E++ P K VVR+K+ D+ P+ + EA+ Q+E++ HDF+ +
Sbjct: 114 VV--------EEVDEAPAK---------VVRSKHIDLKPMDLEEALLQMELLGHDFFIY 155
[156][TOP]
>UniRef100_D0BMS6 Ribosomal subunit interface protein n=1 Tax=Granulicatella elegans
ATCC 700633 RepID=D0BMS6_9LACT
Length = 182
Score = 74.7 bits (182), Expect = 5e-12
Identities = 55/179 (30%), Positives = 96/179 (53%)
Frame = -1
Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360
K I+G N+E+++A++ + E K+ + ++K+ V V ++ + E +T + EV
Sbjct: 3 KYNIRGENIEVTEAIRNYAEKKLSK-LEKYFGDVANATVHVNLKVYTE-----KTAKVEV 56
Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180
T+ + V+RAEE + YGSIDLV ++R++RK K K R KG F +
Sbjct: 57 TIPLP-YLVLRAEETSGDLYGSIDLVIDKLERQVRKYKTKINRKSRE-KG-----FDIPV 109
Query: 179 LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
P + P+ DE+E + E+VRTK D+ P+ EA+ Q+ M+ H+F+ ++
Sbjct: 110 AP-----------VVPEPVDEDESVLEIVRTKRVDLKPMDSEEAVLQMNMLGHNFFIYQ 157
[157][TOP]
>UniRef100_C8NDQ1 Ribosomal subunit interface protein n=1 Tax=Granulicatella adiacens
ATCC 49175 RepID=C8NDQ1_9LACT
Length = 186
Score = 74.7 bits (182), Expect = 5e-12
Identities = 54/179 (30%), Positives = 97/179 (54%)
Frame = -1
Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360
K I+G N+E+++A++Q+ E K+ + ++K+ V ++ + E +T + EV
Sbjct: 9 KYNIRGENIEVTEAIRQYAEKKISK-LEKYFTDVANATAYVNLKVYTE-----KTAKVEV 62
Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180
T+ + V+RAEE + YGSIDLV ++R++RK K K + +R K +++
Sbjct: 63 TIPLP-YLVLRAEETSIDLYGSIDLVVDKLERQVRKHKTK-------INRKSREKGFDIV 114
Query: 179 LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
LP P+ +EEE E+VRTK D+ P+ EA+ Q+ M+ H+F+ ++
Sbjct: 115 LPT-----------LPEAPEEEETGLEIVRTKRIDLKPMDSEEAVLQMNMLGHNFFIYQ 162
[158][TOP]
>UniRef100_C1WM73 SSU ribosomal protein S30P; sigma 54 modulation protein n=1
Tax=Kribbella flavida DSM 17836 RepID=C1WM73_9ACTO
Length = 211
Score = 74.7 bits (182), Expect = 5e-12
Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 6/186 (3%)
Frame = -1
Query: 545 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 366
SV ++++G + E+SD +Q+VE+K+ R I+K + V +V +S + R R
Sbjct: 4 SVDVVVKGHHCEVSDRFRQYVEEKLAR-IEKVDHRVLRCEVEVSQEKNPR--QHDRAMRV 60
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH-GRHM-KGPNRLKF 192
E+T+YTK VVRAE ET + D+ ++ ++RK ++ H G H +G L
Sbjct: 61 ELTMYTKGP-VVRAEACGETKQAAFDVSLDRLRAQVRKAADRRRVHRGEHAPEGLRHLNA 119
Query: 191 SEVILPL-PSEDEEDEIEITPQKDDEEELIEE---VVRTKYFDMPPLTVFEAIDQLEMVD 24
+ + L P ++ E E+ QK + + V+R K P+++ +A+ +LE+V
Sbjct: 120 KQPVNGLAPEAEDSTEDEVPTQKIGSLTVTGDGPLVMREKTHTAKPMSLDQALYELELVG 179
Query: 23 HDFYAF 6
HDFY F
Sbjct: 180 HDFYLF 185
[159][TOP]
>UniRef100_C0FTS3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans
DSM 16841 RepID=C0FTS3_9FIRM
Length = 176
Score = 74.7 bits (182), Expect = 5e-12
Identities = 55/179 (30%), Positives = 95/179 (53%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+++ I GRN+EL++ +K VEDK+ + ++K+ EV+V LS ++ E
Sbjct: 1 MRIKITGRNIELTEGLKAAVEDKLNK-LEKYFTPDTEVNVTLSVE--------KERQKVE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K +R+E+ + Y SIDLV +I+R+L+K + K ++ + F
Sbjct: 52 VTIPMKG-SYIRSEQVSSDMYVSIDLVEEVIERQLKKYRTKLVTKQQNAAAVFKQDFL-- 108
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
DE+ E D+EE+ +++RTK FDM P+ +A ++E++ HDFY F
Sbjct: 109 -------DEKSE--------DDEEI--KIIRTKKFDMKPMYPEDACVEMELLGHDFYVF 150
[160][TOP]
>UniRef100_C0CVD1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
DSM 15981 RepID=C0CVD1_9CLOT
Length = 176
Score = 74.7 bits (182), Expect = 5e-12
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGGEFGRGPRTRRC 366
++ I GRN+E++ +K VE K+G++ +H + EV V LS + + +
Sbjct: 1 MRYTITGRNIEVTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDRQ--------KI 50
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
EVT+ K + +RAEE + Y SIDLV +I+R++R+ ++K D K L FS+
Sbjct: 51 EVTIPVKGN-TIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAALSFSQ 104
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ +++ED+I I V+TK F + P EA Q+EM+ H+FY F
Sbjct: 105 AFIDEEEDEQEDDIRI--------------VKTKKFAIKPTIPEEACLQMEMLGHNFYVF 150
[161][TOP]
>UniRef100_P28368 Uncharacterized protein yvyD n=1 Tax=Bacillus subtilis
RepID=YVYD_BACSU
Length = 189
Score = 74.7 bits (182), Expect = 5e-12
Identities = 52/175 (29%), Positives = 92/175 (52%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
I+G N+E++ A+K HVE K+G++ + + V + DV ++ + + + + EVT+
Sbjct: 5 IRGENIEVTPALKDHVERKIGKLERYFDHSV-DADVNVNLKFYND-----KESKVEVTI- 57
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
+R+E H E Y +IDL ++ ++R++RK K K R P L + +
Sbjct: 58 PMTDLALRSEVHNEDMYNAIDLATNKLERQIRKHKTKVNRKFREQGSPKYLLANGL---- 113
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ +I Q D EEE ++VR K F++ P+ EAI Q+ M+ H+F+ F
Sbjct: 114 -----GSDTDIAVQDDIEEEESLDIVRQKRFNLKPMDSEEAILQMNMLGHNFFVF 163
[162][TOP]
>UniRef100_C2AF84 SSU ribosomal protein S30P; sigma 54 modulation protein n=1
Tax=Thermomonospora curvata DSM 43183 RepID=C2AF84_THECU
Length = 221
Score = 74.3 bits (181), Expect = 7e-12
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Frame = -1
Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT 357
+I++GR+ E++D ++HV++K+ + I++ + + VDV +S R R E+T
Sbjct: 3 IIVKGRHTEVNDRFREHVDNKLAK-IERFARKIIRVDVEVSEEHNPRLA--DRRERVELT 59
Query: 356 LYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH-GRHMKGPNRLKFSEVI 180
+ + R V+RAE AE YG++DL ++ +LR+ ++ H + P +L E +
Sbjct: 60 IRS-RGPVIRAEAAAEDRYGALDLALDKLEARLRRSADRRKIHYNSGTRAPAKLAHLEPL 118
Query: 179 LPLPSE-DEEDEIEITPQKDDEE--ELIEE---------------VVRTKYFDMPPLTVF 54
P+ ED E P + E EE VVR K+ P+T+
Sbjct: 119 TEPPAAAPPEDSAEGAPAAEPAAATEPAEEGGNVVPIAMDGDGPLVVREKFHRSAPMTID 178
Query: 53 EAIDQLEMVDHDFYAFR 3
+A+ ++E+V HDF+ FR
Sbjct: 179 QALYEMELVGHDFFLFR 195
[163][TOP]
>UniRef100_B0MGZ9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
14662 RepID=B0MGZ9_9FIRM
Length = 176
Score = 74.3 bits (181), Expect = 7e-12
Identities = 49/180 (27%), Positives = 98/180 (54%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+ II G+N+E+++ ++ +E+K+GR+ YL ++D+ ++ E ++ E
Sbjct: 1 MNFIISGKNIEVTEGIRAAIEEKLGRL---DKYLTDDIDIIVTLSVQKE------RQKIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K H ++RAE+ + Y SIDLV I++R++R+ K + K+
Sbjct: 52 VTIPMKGH-IIRAEQDSADMYVSIDLVIDILERQIRRYKTRLMSK----------KYEGA 100
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
L D+++++ DE+E+ ++R+K F + P+ V EA Q++++ H+F+ FR
Sbjct: 101 GLKQEFIDKDEDV-------DEDEI--RIIRSKKFAIKPMDVEEACIQMDLLGHNFFVFR 151
[164][TOP]
>UniRef100_A7BEC8 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus
ATCC 17982 RepID=A7BEC8_9ACTO
Length = 214
Score = 74.3 bits (181), Expect = 7e-12
Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 18/195 (9%)
Frame = -1
Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR----TRR 369
+ + RN E+ +++VE+KV ++ Q + R VDV L+ R PR R
Sbjct: 3 ITVVARNAEIHPNFREYVEEKVSKITQFYPRAQR-VDVELTHE------RNPRQADTAER 55
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
E+T+Y K ++RAE + Y ++D+ + + +LR+++++ DH R P L +
Sbjct: 56 IELTVYGKGP-IIRAEAQSADRYAAVDIAAGKLYERLRRLRDRVKDHRRRY--PRDLAEA 112
Query: 188 EVI--------------LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFE 51
E++ P P ED +++ ++++ +VR K + PP++V E
Sbjct: 113 EILEAPVVEETATFEPEAPKPLRSAED-LKVGEAREEQWGDTPIIVRQKVHEAPPMSVDE 171
Query: 50 AIDQLEMVDHDFYAF 6
A+DQ+ MV H F+ F
Sbjct: 172 ALDQMMMVGHPFFLF 186
[165][TOP]
>UniRef100_A4ECY7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
ATCC 25986 RepID=A4ECY7_9ACTN
Length = 194
Score = 74.3 bits (181), Expect = 7e-12
Identities = 53/175 (30%), Positives = 82/175 (46%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
+ GR ++DA++ HV++K+G ++ VDV L P EVT
Sbjct: 5 VSGRKTTVTDALRAHVDEKIGEALKVFDIEPMTVDVVLRYEKNPS---NPNPAIVEVTAR 61
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
R V+R EH Y +IDL + + R+LRK K K D NR +
Sbjct: 62 A-RGSVIRVAEHGADMYAAIDLSADKVTRQLRKFKTKVVD--------NRQGGASAADVA 112
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
P E ED ++ ++D++ L VR K D+ P+T +A+ Q +++ HDFY F
Sbjct: 113 PVERVEDLADLLLPEEDDDLL----VREKVIDVTPMTEEQALVQTDLLGHDFYVF 163
[166][TOP]
>UniRef100_C0Z6T8 Putative uncharacterized protein yvyD n=1 Tax=Brevibacillus brevis
NBRC 100599 RepID=C0Z6T8_BREBN
Length = 185
Score = 73.9 bits (180), Expect = 9e-12
Identities = 52/180 (28%), Positives = 96/180 (53%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N++++ A++++VE KVGR ++K+ + +V+++ RG T
Sbjct: 1 MKFNIRGENIQVTAALREYVEKKVGR-LEKYFETPQPTEVQVTMH----VHRGEGTIEVT 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
+ L ++RAEE E Y +IDLV ++R++RK K K R + R+
Sbjct: 56 IPLSGV---IIRAEETHEDMYAAIDLVVEKLERQIRKHKTKLMRKLR-VDSTGRI----- 106
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
++ E + + DEE++ ++VRTK FD+ P+ EA+ Q++M+ H F+ F+
Sbjct: 107 -----AQRESQPVAVMIPDVDEEDIDIDIVRTKRFDLKPMDAQEAVMQMDMLGHSFFVFQ 161
[167][TOP]
>UniRef100_A5UVY5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Roseiflexus sp. RS-1 RepID=A5UVY5_ROSS1
Length = 193
Score = 73.9 bits (180), Expect = 9e-12
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 1/179 (0%)
Frame = -1
Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT 357
LI++ RN ++S+ +QH+E K+ R+ + YL R V + G R +VT
Sbjct: 3 LIVKSRNGKISERQRQHIEQKLSRLDR---YLDRIAQVTVEHMEEMRRNEG-NVHRVQVT 58
Query: 356 LYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL 177
+ +VRAE A Y +ID V +QR++ + K+K H R +G R + +++
Sbjct: 59 VVGDHGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDK---HWR--RGKLRRQGGQIVE 113
Query: 176 PLPSEDEEDEIEITPQKD-DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
LP E+ D EEE +VRTK F + P+ EA++Q+E++ H+F+ F+
Sbjct: 114 ALP------ELAAPSLADTQEEEERPRIVRTKEFQVKPMYSDEAVEQMELLGHNFFIFQ 166
[168][TOP]
>UniRef100_C4FCG3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis
DSM 13280 RepID=C4FCG3_9ACTN
Length = 194
Score = 73.9 bits (180), Expect = 9e-12
Identities = 51/179 (28%), Positives = 88/179 (49%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+++ + GR ++DA++ HV++K+G ++ DV L P E
Sbjct: 1 MEIKVSGRKTTVTDALRAHVDEKIGEALKVFDIEPMTADVVLRYEKNPS---NPNPAIVE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ R V+R EH Y +IDL + + R+LRK K + D+ + L +EV
Sbjct: 58 VTVRA-RGSVIRVAEHGADMYAAIDLAAEKVTRQLRKFKTRVVDNRQQ-----GLSAAEV 111
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
P E D ++ +D++++L VR K ++ P+T EA+ Q +++ HDFY F
Sbjct: 112 A---PVEPVADLADLLLPEDEDDQL----VRVKEVELTPMTDEEALVQTDLIGHDFYVF 163
[169][TOP]
>UniRef100_B7IPV2 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
RepID=B7IPV2_BACC2
Length = 180
Score = 73.9 bits (180), Expect = 9e-12
Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVMDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
[170][TOP]
>UniRef100_A5Z528 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
ATCC 27560 RepID=A5Z528_9FIRM
Length = 179
Score = 73.9 bits (180), Expect = 9e-12
Identities = 53/179 (29%), Positives = 95/179 (53%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K+ I G+N+E+++ ++ VE+K+G+ + K+ VDV LS ++ E
Sbjct: 1 MKIKIFGKNIEVTEGIRSAVEEKIGK-LDKYFAEETRVDVTLSVN--------KNEQKVE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K ++RAEE ++ Y SID+V I+R+L K K K D + +K F+E
Sbjct: 52 VTIPVKGR-IIRAEEISDDMYVSIDMVEETIERQLVKYKNKIIDKKKSIKE----AFTET 106
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ EDE DE+++ ++ +TK F + P+ EA ++E++ H+F+ F
Sbjct: 107 YIEADYEDE-----------DEDQI--KIKKTKRFGIKPMDPEEACVEMELLGHNFFVF 152
[171][TOP]
>UniRef100_Q49VV1 Uncharacterized protein SSP1964 n=1 Tax=Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305
RepID=Y1964_STAS1
Length = 190
Score = 73.9 bits (180), Expect = 9e-12
Identities = 49/180 (27%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
++ I G N+ ++DA++ ++E+K+G++ + + + V++ T +
Sbjct: 2 IRFEIHGENLTITDAIRNYIEEKIGKLERYFNDVPNATAHVKVKTYQNS-------ATKI 54
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
EVT+ K+ +RAEE + Y IDL+++ ++R++RK K + R+ +G E
Sbjct: 55 EVTIPLKKV-TLRAEERNDDLYAGIDLINNKLERQVRKYKTRVNRRNRN-RGEQ-----E 107
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
LP E E EI+ + D E E++R K F + P+ EA+ Q++++ HDF+ F
Sbjct: 108 AFASLPEEKEAVEIQNDENEADNEI---EIIRAKNFSLKPMDSEEAVLQMDLLGHDFFIF 164
[172][TOP]
>UniRef100_Q5WDF7 Ribosomal protein S30EA n=1 Tax=Bacillus clausii KSM-K16
RepID=Q5WDF7_BACSK
Length = 184
Score = 73.6 bits (179), Expect = 1e-11
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRCEVTL 354
I+G N+E++ A+++++E KVG++ + +V+V+L G GE EVT+
Sbjct: 5 IRGENIEVTPAIREYIEKKVGKLERYFDTTPTADVNVKLQVLGSGESS-------IEVTI 57
Query: 353 YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP 174
+ ++R EE Y +ID+V ++R++RK K K R +G + F + P
Sbjct: 58 PMPKL-LLRGEEINADMYAAIDIVVEKLERQIRKYKTKVNRKFRQ-EGSLKYMFKNELEP 115
Query: 173 LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
L E ED+ EL EVVRTK F++ P+ EAI Q++++ H+F+ F
Sbjct: 116 LRDEVAEDD-----------EL--EVVRTKRFNLKPMDAEEAILQMDLLGHNFFVF 158
[173][TOP]
>UniRef100_B7GL70 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Anoxybacillus
flavithermus WK1 RepID=B7GL70_ANOFW
Length = 182
Score = 73.6 bits (179), Expect = 1e-11
Identities = 54/179 (30%), Positives = 93/179 (51%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A++++VE K+G+ ++++ V V ++ + + + + E
Sbjct: 1 MKYNIRGENIEVTQAIREYVEKKIGK-LERYFESTEGVTVHVNLKVYND-----KQAKIE 54
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ + V+RAEE + Y +IDLV ++R++RK K K R K N + +
Sbjct: 55 VTIPMPQI-VLRAEERHDDMYAAIDLVVDKLERQIRKHKTKVNRKMRE-KEANGVTLTAT 112
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ E EE+E E VVRTK F + P+ EAI Q+ M+ H+FY F
Sbjct: 113 VPVATEEHEEEEFE--------------VVRTKRFSLKPMDSEEAILQMNMLGHNFYVF 157
[174][TOP]
>UniRef100_B5UPY3 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
RepID=B5UPY3_BACCE
Length = 180
Score = 73.6 bits (179), Expect = 1e-11
Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
[175][TOP]
>UniRef100_C7G8P2 Ribosomal subunit interface protein n=1 Tax=Roseburia intestinalis
L1-82 RepID=C7G8P2_9FIRM
Length = 176
Score = 73.2 bits (178), Expect = 2e-11
Identities = 51/179 (28%), Positives = 91/179 (50%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+++ I GRN+EL+D +K VEDK+ ++ Y + DV ++ E ++ E
Sbjct: 1 MRIKITGRNIELTDGIKDAVEDKLNKL---EKYFTPDTDVYVTLSVEKE------RQKVE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K + +R+E+ + Y SIDLV +I+R+L+K + K + + F +
Sbjct: 52 VTIPMKGN-YIRSEQVSNDMYVSIDLVEEVIERQLKKYRTKLVTKQQSAASVFKQDFLDA 110
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
DD+EE+ +++R+K FDM P+ +A Q+E++ HDF+ F
Sbjct: 111 A-----------------SDDDEEI--KIIRSKKFDMKPMYPEDACVQMELLGHDFFVF 150
[176][TOP]
>UniRef100_C2U573 Ribosome-associated factor Y n=3 Tax=Bacillus cereus
RepID=C2U573_BACCE
Length = 180
Score = 73.2 bits (178), Expect = 2e-11
Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
[177][TOP]
>UniRef100_B7HEI9 Ribosomal subunit interface protein n=9 Tax=Bacillus cereus group
RepID=B7HEI9_BACC4
Length = 180
Score = 73.2 bits (178), Expect = 2e-11
Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF-- 106
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
[178][TOP]
>UniRef100_A8W0Z3 Maf protein n=1 Tax=Bacillus selenitireducens MLS10
RepID=A8W0Z3_9BACI
Length = 197
Score = 73.2 bits (178), Expect = 2e-11
Identities = 55/180 (30%), Positives = 94/180 (52%)
Frame = -1
Query: 545 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 366
S+ I+G N+E++ A++ +VE KVG+ ++K+ DV + + ++
Sbjct: 14 SMNFNIRGENLEITPALRDYVEKKVGK-LEKYFETTPSSDVHV------KMSVVNTDQKV 66
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
E+T+ + ++RAEE Y ++DLV ++R++RK K K R +G + LK+
Sbjct: 67 EITIPMPKL-LLRAEEKHADMYAAVDLVIEKLERQIRKHKTKVN---RKFRGEDSLKYM- 121
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+E E E TP D E+VRTK FD+ P+ EAI Q++M+ H+F+ F
Sbjct: 122 ----FKNELEPISEEETPDDD------YEIVRTKRFDLKPMDAEEAILQMDMLGHNFFVF 171
[179][TOP]
>UniRef100_C3AT15 Ribosome-associated factor Y n=3 Tax=Bacillus RepID=C3AT15_BACMY
Length = 180
Score = 72.8 bits (177), Expect = 2e-11
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ EV V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEVKVNLKVYSDKQ--------RVE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV ++R++RK K K R P +
Sbjct: 52 VTIPFTDL--LLRAEETHSDMYAAIDLVVDKVERQIRKHKTKVNRKLREKGSPK----TA 105
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
IL P+ E+ K+DE EL VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 106 FILTEPAATLEEV------KEDELEL----VRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
[180][TOP]
>UniRef100_B7HX18 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
RepID=B7HX18_BACC7
Length = 180
Score = 72.8 bits (177), Expect = 2e-11
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV ++R++RK K K R KG + F
Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDQLELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
[181][TOP]
>UniRef100_Q72XS8 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
RepID=Q72XS8_BACC1
Length = 180
Score = 72.8 bits (177), Expect = 2e-11
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV ++R++RK K K R KG + F
Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
[182][TOP]
>UniRef100_B4VG26 Ribosomal subunit interface protein n=1 Tax=Streptomyces sp. Mg1
RepID=B4VG26_9ACTO
Length = 250
Score = 72.8 bits (177), Expect = 2e-11
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Frame = -1
Query: 593 RRGAAS-ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVG-RVIQKHSYLVREVDVR 420
R+G AS + S+ G V ++++GR E+ + ++HV +K+ IQK V +DV
Sbjct: 2 RKGDASPLGRSYPGTEFCVDIVVKGRKTEVPERFRKHVAEKLNPERIQKLDAKVISLDVE 61
Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240
+S + R+ R E+TL++ R V+RAE A Y ++DL ++ +LRK +K
Sbjct: 62 VSKEHNPR--QADRSDRVEITLHS-RGPVIRAEAAAADAYAALDLAQDKLEARLRKQHDK 118
Query: 239 ETDHGRHMKGPNRLKFSEVILPLP------------SEDEEDEIEITP----QKDDEEEL 108
+G RL +EV +P +E++ D I T + E L
Sbjct: 119 RYTR----RGNGRLSAAEVADVVPGVAQLNGNGQPFTEEQADAIPTTRIGSLEVQGEGPL 174
Query: 107 IEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
I VR K P+++ +A+ ++E+V HDFY F
Sbjct: 175 I---VREKTHSAAPMSLDQALYEMELVGHDFYLF 205
[183][TOP]
>UniRef100_A5ZRI8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
29174 RepID=A5ZRI8_9FIRM
Length = 175
Score = 72.8 bits (177), Expect = 2e-11
Identities = 55/179 (30%), Positives = 91/179 (50%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K II G+N+ +S +K VEDK+G+ ++++ EV V LS ++ E
Sbjct: 1 MKFIISGKNITVSQGLKTAVEDKLGK-LERYFTPDTEVVVTLSVE--------KERQKIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K + ++R+E+ + Y SIDLV +I+R+LRK K K D K F +
Sbjct: 52 VTIPMKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVD-----KQQAAANFQKE 105
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
L KD EE+ +++RTK F + P+ +A Q+E++ H+F+ F
Sbjct: 106 YL---------------DKDYEEDEEVKIIRTKKFGIKPMYPEDACVQMELLGHNFFVF 149
[184][TOP]
>UniRef100_B1IAC2 Ribosome-associated protein Y n=15 Tax=Streptococcus pneumoniae
RepID=B1IAC2_STRPI
Length = 182
Score = 72.8 bits (177), Expect = 2e-11
Identities = 50/179 (27%), Positives = 99/179 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +V K+ + I+K+ +E+D R++ + E +T + E
Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV+ I+R++RK K K ++ +L F++
Sbjct: 56 VTIPLGSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQL-FTDA 113
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
++ +D + +VVR+K D+ P+ + EAI Q++++ HDF+ +
Sbjct: 114 LV-----------------EDSNVVQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFIY 155
[185][TOP]
>UniRef100_UPI000196CE6C hypothetical protein CATMIT_02221 n=1 Tax=Catenibacterium mitsuokai
DSM 15897 RepID=UPI000196CE6C
Length = 193
Score = 72.4 bits (176), Expect = 3e-11
Identities = 48/180 (26%), Positives = 101/180 (56%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K+I++G+N+ ++DA++ + K+ ++ K+ + ++V+ ++ R P ++ E
Sbjct: 16 MKVIVRGKNVTITDAIEDKITKKLA-LLDKYFIMGQDVEAKVLIR------TYPFGQKIE 68
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ T+ + ++RAEE ++ Y +IDLV ++R++RK K K + ++ N+L F+
Sbjct: 69 VTIPTE-YVLLRAEETSDDLYEAIDLVIDKLERQIRKYKTKLSRKSKN----NKLAFNIN 123
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
L E EE+++ VV+TK + P+ + EAI Q+E++ H F+ ++
Sbjct: 124 TLEALEEPEEEDV---------------VVKTKTINPKPMDMEEAIMQMELIGHSFFVYK 168
[186][TOP]
>UniRef100_C6D4V5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Paenibacillus sp. JDR-2 RepID=C6D4V5_PAESJ
Length = 182
Score = 72.4 bits (176), Expect = 3e-11
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 3/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K II+G +++++A++++ K+ R+ + E V LS G E
Sbjct: 1 MKYIIRGHRIQVTEALREYAVKKISRLEKYFEAPASETTVTLSVTKG--------KHAVE 52
Query: 362 VTLYTKRHGVV-RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ GV+ RAE+ +E Y SID+V ++R++RK K K RH G L F E
Sbjct: 53 VTIPLV--GVMLRAEDKSEDMYSSIDVVVDKLERQIRKHKTKMNRKFRHESGVKAL-FKE 109
Query: 185 VI--LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
+ + DEEDE+E+ VRTK F + P+ V EAI Q+ MV H+F+
Sbjct: 110 GLSQTAVSVMDEEDELEL--------------VRTKRFMLKPMDVEEAILQMNMVGHNFF 155
Query: 11 AF 6
F
Sbjct: 156 VF 157
[187][TOP]
>UniRef100_B5E3V2 Ribosomal subunit interface protein n=1 Tax=Streptococcus
pneumoniae G54 RepID=B5E3V2_STRP4
Length = 182
Score = 72.4 bits (176), Expect = 3e-11
Identities = 50/179 (27%), Positives = 99/179 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +V K+ + I+K+ +E+D R++ + E +T + E
Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV+ I+R++RK K K ++ +L F++
Sbjct: 56 VTIPLGSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQL-FTDA 113
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
++ +D + +VVR+K D+ P+ + EAI Q++++ HDF+ +
Sbjct: 114 LV-----------------EDSNIVQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFXY 155
[188][TOP]
>UniRef100_A9AY42 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Herpetosiphon aurantiacus ATCC 23779
RepID=A9AY42_HERA2
Length = 186
Score = 72.4 bits (176), Expect = 3e-11
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 4/180 (2%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVRE--VDVRLST-RGGGEFGRGPRTRRCEV 360
I+ RN++L DA K +++K+G+ ++++ + + V+ R T RG GE T +
Sbjct: 5 IKSRNIKLHDAQKAFIQEKLGK-LERYLDGINDWKVECRFETLRGSGE------TYTVQA 57
Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180
TL ++RAEE Y +++ V +QR++R+ KEK + +G R E+I
Sbjct: 58 TLLADHGIILRAEERDRELYAAVEAVHDNLQRQIRRFKEKH-----YRRGKLRRTAGEII 112
Query: 179 L-PLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
PLP+ E D E+ +++R K + P+ EAI+Q+E++ H F+ FR
Sbjct: 113 AAPLPALPE----------DAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFVFR 162
[189][TOP]
>UniRef100_C9L411 Ribosomal subunit interface protein n=1 Tax=Blautia hansenii DSM
20583 RepID=C9L411_RUMHA
Length = 176
Score = 72.4 bits (176), Expect = 3e-11
Identities = 55/179 (30%), Positives = 93/179 (51%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K II G+N+E++ ++ VEDK+G+ ++K+ E+ V LS ++ E
Sbjct: 1 MKFIISGKNIEVTQGLRSAVEDKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K + ++R+E+ + Y SIDLV II+R+LRK K K D + + +F E
Sbjct: 52 VTIPVKGN-IIRSEQVSSDMYVSIDLVEEIIERQLRKYKNKIID--KKQSAGFQPEFVE- 107
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ EED EI +++RTK F P+ +A Q+E++ H+F+ F
Sbjct: 108 -----KDYEEDTNEI------------KIIRTKKFGFKPMYPEDACVQMELLGHNFFVF 149
[190][TOP]
>UniRef100_B6G8G1 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM
13279 RepID=B6G8G1_9ACTN
Length = 194
Score = 72.4 bits (176), Expect = 3e-11
Identities = 50/179 (27%), Positives = 88/179 (49%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+++ + GR ++DA++ HV++K+G ++ DV L P E
Sbjct: 1 MEIKVSGRKTTVTDALRAHVDEKIGEALKVFDIEPMTADVVLRYEKNPS---NPNPAIVE 57
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ R V+R EH Y +IDL + + R+LRK K + D+ + L +EV
Sbjct: 58 VTVRA-RGSVIRVAEHGADMYAAIDLAADKVTRQLRKFKTRVVDNRQQ-----GLSAAEV 111
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
P D D + P+++D++ +VR K ++ P+T +A+ Q +++ HDFY F
Sbjct: 112 APVEPVADLADLL--IPEEEDDQ-----LVRVKEIELTPMTEEQALVQTDLLGHDFYVF 163
[191][TOP]
>UniRef100_C1CNI0 Ribosome-associated protein Y n=9 Tax=Streptococcus pneumoniae
RepID=C1CNI0_STRZP
Length = 182
Score = 72.4 bits (176), Expect = 3e-11
Identities = 50/179 (27%), Positives = 99/179 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +V K+ + I+K+ +E+D R++ + E +T + E
Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV+ I+R++RK K K ++ +L F++
Sbjct: 56 VTIPLGSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQL-FTDA 113
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
++ +D + +VVR+K D+ P+ + EAI Q++++ HDF+ +
Sbjct: 114 LV-----------------EDSNIVQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFIY 155
[192][TOP]
>UniRef100_C1CBI3 Ribosome-associated protein Y n=1 Tax=Streptococcus pneumoniae
70585 RepID=C1CBI3_STRP7
Length = 182
Score = 72.0 bits (175), Expect = 4e-11
Identities = 50/179 (27%), Positives = 98/179 (54%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +V K+ + I+K+ +E+D R++ + E +T + E
Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ ++ YGSIDLV+ I+R++RK K K ++ +L F++
Sbjct: 56 VTIPLGSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQL-FTDA 113
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
++ +D + +VVR K D+ P+ + EAI Q++++ HDF+ +
Sbjct: 114 LV-----------------EDSNVVQSKVVRLKQIDLKPMDLEEAILQMDLLGHDFFIY 155
[193][TOP]
>UniRef100_B5XMH0 Ribosomal subunit interface protein n=1 Tax=Streptococcus pyogenes
NZ131 RepID=B5XMH0_STRPZ
Length = 182
Score = 71.6 bits (174), Expect = 5e-11
Identities = 56/179 (31%), Positives = 97/179 (54%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E R+ + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAE+ + YGSI LV I+R++RK K K R K P F+
Sbjct: 56 VTIPLDSV-TLRAEDVSXDMYGSIXLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-- 111
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+E E +E++ P+ +VVRTK + P+ V EA Q+E++ HDF+ +
Sbjct: 112 -----TEFEAEEVDEIPEV--------QVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157
[194][TOP]
>UniRef100_A8M3Q2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Salinispora arenicola CNS-205 RepID=A8M3Q2_SALAI
Length = 208
Score = 71.6 bits (174), Expect = 5e-11
Identities = 50/189 (26%), Positives = 96/189 (50%), Gaps = 11/189 (5%)
Frame = -1
Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT----RR 369
++++GRN+E+ D + HV +K+ + I+++ + V VDV L R PR +R
Sbjct: 3 IVVKGRNVEVPDHYRVHVAEKLAK-IERYDHKVIRVDVELFHE------RNPRQSDHCQR 55
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMK-----GP 207
E+T ++ R V+RAE Y ++D + + ++R+ ++ HGRH
Sbjct: 56 VEITCFS-RGPVMRAEACTSDFYSALDAAIARLDTRMRRAADRRRVHHGRHAPISVAAAT 114
Query: 206 NRLKFSEVIL-PLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 30
RL ++++ PL + + +++ ++ + R K P+TV +A+ Q+E+
Sbjct: 115 ARLPVTDLVAAPLSHDGATATVAAERPEEERDDQPWHIAREKVHPAEPMTVDDALFQMEL 174
Query: 29 VDHDFYAFR 3
V HDFY F+
Sbjct: 175 VGHDFYLFQ 183
[195][TOP]
>UniRef100_C8P6S3 Ribosomal subunit interface protein n=1 Tax=Lactobacillus antri DSM
16041 RepID=C8P6S3_9LACO
Length = 179
Score = 71.6 bits (174), Expect = 5e-11
Identities = 53/180 (29%), Positives = 94/180 (52%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++DA++ +V ++ + +QK E ++ + RT + E
Sbjct: 2 LKFNIRGENVEVTDAIRDYVVKRISK-LQKFFEDSVEATAHVNLKVYPN-----RTYKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ + +RAEE + YGS+DLV+ ++R++RK K K R KG L+F
Sbjct: 56 VTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF--- 110
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
+PS+D+ E+ ++VRTK + P+ EA+ Q++M+ HDF+ F+
Sbjct: 111 ---VPSDDDAASDEL------------KIVRTKQVSLKPMDPEEAVLQMDMLGHDFFVFQ 155
[196][TOP]
>UniRef100_A9VQA3 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Bacillus cereus group RepID=A9VQA3_BACWK
Length = 180
Score = 71.6 bits (174), Expect = 5e-11
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155
[197][TOP]
>UniRef100_C2ETD9 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
vaginalis ATCC 49540 RepID=C2ETD9_9LACO
Length = 189
Score = 71.6 bits (174), Expect = 5e-11
Identities = 51/188 (27%), Positives = 100/188 (53%), Gaps = 3/188 (1%)
Frame = -1
Query: 557 GPLSSVKLIIQGRNMELSDAVKQHVEDKVGRV---IQKHSYLVREVDVRLSTRGGGEFGR 387
G ++ +K I+G N+E++D+++ +V ++ ++ + + V++++
Sbjct: 6 GEITMLKFNIRGENIEVTDSIRDYVVKRINKLQKFFEDNVEATAHVNLKVYPN------- 58
Query: 386 GPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP 207
RT + EVT+ + +RAEE + YGS+DLV+ ++R++RK K K R KG
Sbjct: 59 --RTYKVEVTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGF 114
Query: 206 NRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMV 27
L+F +P++D+ + +DD ++VRTK + P+ EA+ Q++M+
Sbjct: 115 KSLEF------VPTDDDAE------SQDD-----LKIVRTKQISLKPMDPEEAVLQMDML 157
Query: 26 DHDFYAFR 3
HDF+ F+
Sbjct: 158 GHDFFVFQ 165
[198][TOP]
>UniRef100_C0GF81 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF81_9FIRM
Length = 177
Score = 71.6 bits (174), Expect = 5e-11
Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+KLI++G+N+E+++A++++V ++G+ I K+ + E V L+ G R E
Sbjct: 1 MKLILRGKNIEVTNALEEYVNKRIGK-IDKYFDVDTEAQVTLTVEHG--------MHRVE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIK---EKETDHGRHMKGPNRLKF 192
VT + ++RAEE Y SID V ++R++ K K ++ G +K N L
Sbjct: 52 VTAAIEGM-ILRAEESTGDMYASIDSVVDKLERQIAKYKTRINRKARQGGGIKAMNEL-- 108
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
PQ +DEEE +VV+TK F + P+ V EAI Q+ ++ HDF+
Sbjct: 109 -------------------PQVEDEEE-DWDVVKTKRFVVKPMPVEEAILQMNLLGHDFF 148
Query: 11 AF 6
F
Sbjct: 149 VF 150
[199][TOP]
>UniRef100_B7GE66 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7GE66_PHATR
Length = 209
Score = 71.6 bits (174), Expect = 5e-11
Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 8/190 (4%)
Frame = -1
Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQK--HSYLVREVDVRLSTRGGGEFGRGPRT 375
+ V +II G+N+EL+ A+ +HV ++G I K + ++E DV LS + G
Sbjct: 9 TEVPVIINGQNIELTPALVEHVNKRIGGQINKLASNGAIQECDVILSVSKNPKVKNG--- 65
Query: 374 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNR 201
R EV K ++ E + Y SID S + RKL K K+ HG G +
Sbjct: 66 HRVEVVTNLKGTSIICHNESPDM-YASIDAASHALYRKLCKYKDNRVAGWHGGEKMGNDI 124
Query: 200 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEE---VVRTKYFDMP-PLTVFEAIDQLE 33
+ EV+ E+ ED E T EE + E + + K FD+ P++V EA+ L+
Sbjct: 125 M---EVL-----ENLEDVSEYTATPVAEEYVDPEAPTITKVKNFDLTKPMSVQEAVFALD 176
Query: 32 MVDHDFYAFR 3
+DHDFY FR
Sbjct: 177 YIDHDFYVFR 186
[200][TOP]
>UniRef100_Q1AVJ5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ5_RUBXD
Length = 189
Score = 71.2 bits (173), Expect = 6e-11
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 7/186 (3%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEF--GRGPRTRR 369
++++++GRN+ ++D+++++ +KV RV + D R R E R P
Sbjct: 1 MEIVVKGRNIPVTDSLERYAVEKVERVRKFFD------DDRSVARAEVELIHERNPSIAA 54
Query: 368 CEVTLYTK--RHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNR 201
EV T V++A E +E Y SID +S ++R++++ + ++ D HGR
Sbjct: 55 SEVAETTLFINGAVLKAREASEDMYASIDRMSDKLERQVKRYRGRQVDRWHGR------- 107
Query: 200 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVD 24
LK E E P +EEE IE +VRTK F M P++ EA+ Q+E++D
Sbjct: 108 LK----------NHEGARAEPQPFVAEEEEDIEPRIVRTKQFQMKPMSAEEAVLQMELLD 157
Query: 23 HDFYAF 6
HDF+ F
Sbjct: 158 HDFFVF 163
[201][TOP]
>UniRef100_C5QVF5 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus
epidermidis W23144 RepID=C5QVF5_STAEP
Length = 189
Score = 71.2 bits (173), Expect = 6e-11
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 2/181 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
++ I G N+ ++DA++ ++E+KVG++ + + + V VR+ T T +
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKVGKLERYFNNVPNAVAHVRVKTYSNS-------TTKI 54
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
EVT+ K +RAEE + Y IDL+++ ++R++RK K + R +G + +E
Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRVNRKHRD-RGDQDIFVAE 112
Query: 185 VILPLPSEDEEDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
V E Q DD E E E++R+K F + P+ EA+ Q+ ++ HDF+
Sbjct: 113 V----------QESTANNQADDIESENDIEIIRSKQFSLKPMDSEEAVLQMNLLGHDFFI 162
Query: 8 F 6
F
Sbjct: 163 F 163
[202][TOP]
>UniRef100_C5QQC2 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus
epidermidis M23864:W1 RepID=C5QQC2_STAEP
Length = 191
Score = 71.2 bits (173), Expect = 6e-11
Identities = 46/180 (25%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
++ I G N+ ++DA++ ++E+K+G++ + + + V V++ T +
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYSNS-------ATKI 54
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
EVT+ K +RAEE + Y IDL+++ ++R++RK K + R +G + +E
Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRVNRKHRD-RGDQEVFVAE 112
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
V E +E+ + D++ ++ E++R+K F + P+ EA+ Q+ ++ HDF+ F
Sbjct: 113 V-----QEATPEEVSGAEEPDNDSDI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIF 165
[203][TOP]
>UniRef100_C9RVC1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Geobacillus RepID=C9RVC1_9BACI
Length = 182
Score = 71.2 bits (173), Expect = 6e-11
Identities = 51/175 (29%), Positives = 97/175 (55%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
++G N+E++ A++++VE K+G+ ++++ +V+V ++ + + G+G + EVT+
Sbjct: 5 VRGENIEVTPALREYVEKKIGK-LERYFDRTDDVNVHVNLKVYND-GQG----KIEVTIP 58
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
H ++RAEE E Y +IDLV+ ++R++RK K K R + +L I
Sbjct: 59 IP-HLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKVNRKLRDREKEAKLAAPVSIGAS 117
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+E+EE+ E+VRTK+F + P+ EAI Q+ ++ H+F+ F
Sbjct: 118 AAENEEEF---------------EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157
[204][TOP]
>UniRef100_C2SSP0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus BDRD-ST196
RepID=C2SSP0_BACCE
Length = 180
Score = 71.2 bits (173), Expect = 6e-11
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155
[205][TOP]
>UniRef100_C2Q3D0 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
RepID=C2Q3D0_BACCE
Length = 180
Score = 71.2 bits (173), Expect = 6e-11
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F
Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF-- 106
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155
[206][TOP]
>UniRef100_C0CJV5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
DSM 10507 RepID=C0CJV5_9FIRM
Length = 175
Score = 71.2 bits (173), Expect = 6e-11
Identities = 54/179 (30%), Positives = 94/179 (52%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+ II G+N+ ++D ++ VEDK+G+ ++++ E+ V LS + + E
Sbjct: 1 MNFIISGKNLTVTDGLRTAVEDKLGK-LERYFTPDTEIIVTLSVEKSRQ--------KIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K + ++R+E+ + Y SIDLV +I+R+LRK K K D + G + F +
Sbjct: 52 VTIPVKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKTKIVD--KEKAGDH---FQKA 105
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ E EEDE++I RTK FD+ P+ +A Q+E++ H+F+ F
Sbjct: 106 FIEKEYE-EEDEVKIQ--------------RTKKFDIKPMYPEDACVQMELLGHNFFVF 149
[207][TOP]
>UniRef100_A0RKX8 Sigma 54 modulation protein / SSU ribosomal protein S30P n=26
Tax=Bacillus cereus group RepID=A0RKX8_BACAH
Length = 180
Score = 71.2 bits (173), Expect = 6e-11
Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV ++R++RK K K R KG + F
Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
[208][TOP]
>UniRef100_A9BI17 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Petrotoga mobilis SJ95 RepID=A9BI17_PETMO
Length = 199
Score = 70.9 bits (172), Expect = 8e-11
Identities = 48/182 (26%), Positives = 96/182 (52%), Gaps = 9/182 (4%)
Frame = -1
Query: 521 RNMELSDAVKQHVEDKVGR---VIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
+ +EL++A++ ++E ++ + +++KH +V DVR++ G + E+T +
Sbjct: 8 KEVELTEALENYIEKRMSKPDHLLKKHPDIVSPSDVRITKERG--------IYKVEITTH 59
Query: 350 TKRHG-VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK-----ETDHGRHMKGPNRLKFS 189
+++ EE + Y +ID V+ ++RK+RK+K + TD M+ L+
Sbjct: 60 INPLSKIIKVEERSNDLYEAIDEVTDSLERKIRKLKNRLQEQSRTDKKARMEIEQNLQNP 119
Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
++ +E+ E EIE P ++VRTK FD+ ++V EA+ Q++++ H F+
Sbjct: 120 DIKNLDLAEENESEIEEKPDAP-------KIVRTKNFDLTLMSVEEAMLQMQLLGHSFFV 172
Query: 8 FR 3
FR
Sbjct: 173 FR 174
[209][TOP]
>UniRef100_Q2B1U0 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. NRRL
B-14911 RepID=Q2B1U0_9BACI
Length = 184
Score = 70.9 bits (172), Expect = 8e-11
Identities = 53/175 (30%), Positives = 93/175 (53%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
I+G N+E++ A++++VE K+ + ++K+ + +V ++ + + EVT+
Sbjct: 5 IRGENIEVTPAIREYVEKKIAK-LEKYFTETPDANVHVNLKTYNN-----NRSKVEVTI- 57
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
++ V+RAEE E Y +IDL+ ++R++RK K K R KG L F+
Sbjct: 58 PMQNLVLRAEEDHEDMYAAIDLIVDKLERQIRKHKTKVNRKFRE-KGSPTLMFASF---- 112
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
DE E ++++ +L EVVR K FD+ P+ EAI Q+ ++ H FY F
Sbjct: 113 ------DEPEAPVLEEEDNDL--EVVRQKSFDLKPMDNEEAILQMNLLGHSFYVF 159
[210][TOP]
>UniRef100_C2ZFA1 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
RepID=C2ZFA1_BACCE
Length = 180
Score = 70.9 bits (172), Expect = 8e-11
Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV ++R++RK K K R KG + F
Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF-- 106
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
[211][TOP]
>UniRef100_C2YZ14 Ribosome-associated factor Y n=1 Tax=Bacillus cereus AH1271
RepID=C2YZ14_BACCE
Length = 180
Score = 70.9 bits (172), Expect = 8e-11
Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV ++R++RK K K R KG + F
Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF-- 106
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
[212][TOP]
>UniRef100_C2WEE0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus Rock3-44
RepID=C2WEE0_BACCE
Length = 180
Score = 70.9 bits (172), Expect = 8e-11
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ E+ V L +R E
Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYS--------EKQRVE 51
Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
VT+ +T ++RAEE Y +IDLV I+R++RK K K R P
Sbjct: 52 VTIPFTDL--LLRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLREKGSPKTTFILT 109
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
E +ED++E+ VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 110 ESAATLEEVKEDDLEL--------------VRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155
[213][TOP]
>UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
29176 RepID=B5CNW3_9FIRM
Length = 186
Score = 70.9 bits (172), Expect = 8e-11
Identities = 54/179 (30%), Positives = 92/179 (51%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+ II G+N+E++ +K +E K+G+ ++++ E++V LS G + + E
Sbjct: 1 MNFIISGKNIEVTPGLKDAIEQKLGK-LERYFTPETEINVTLSVEKGRQ--------KIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K + ++R+E+ ++ Y SIDLV +I+R+LRK K K R P S
Sbjct: 52 VTIPVKGN-IIRSEQTSDNMYVSIDLVEEVIERQLRKYKNKLV--ARSQGHPT----SYT 104
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
E E E +DDE ++VRTK F + P+ +A Q+E++ H F+ F
Sbjct: 105 STGNSFRKEFFETEDDAAEDDE----IQIVRTKKFGIKPMFPEDACIQMELLGHSFFVF 159
[214][TOP]
>UniRef100_P47995 Uncharacterized protein Sca_0400 n=1 Tax=Staphylococcus carnosus
subsp. carnosus TM300 RepID=Y400_STACT
Length = 188
Score = 70.9 bits (172), Expect = 8e-11
Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
++ I G N+ ++DA++ ++EDKVG+ ++++ V V+ + + + + E
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEDKVGK-LERYFTNVPNVNAHVKVKTYAN-----SSTKIE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ +RAEE + Y IDL+++ ++R++RK K + NR K E
Sbjct: 56 VTI-PLNDVTLRAEERNDDLYAGIDLITNKLERQVRKYKTRV----------NRKKRKES 104
Query: 182 IL-PLPSEDEED-EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
P P+ E E + KDDE E+I R+K F + P+ EA+ Q++++ HDF+
Sbjct: 105 EHEPFPATPETPPETAVDHDKDDEIEII----RSKQFSLKPMDSEEAVLQMDLLGHDFFI 160
Query: 8 F 6
F
Sbjct: 161 F 161
[215][TOP]
>UniRef100_Q1WSW6 Ribosome-associated factor Y n=1 Tax=Lactobacillus salivarius
UCC118 RepID=Q1WSW6_LACS1
Length = 184
Score = 70.5 bits (171), Expect = 1e-10
Identities = 52/179 (29%), Positives = 94/179 (52%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K+ ++G N+E++ A++++VE ++ ++ + D ST +T + E
Sbjct: 2 LKINVRGENIEVTGAIREYVEKRLAKL---EKFFDNTAD---STAHVNLKVYSDKTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ + V+RAEE + Y SIDLV+ ++R++RK K K R KG +F+
Sbjct: 56 VTIPLP-YLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKNFEFA-- 111
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
P DE++E+E + E+VRTK + P+ EA+ Q++M+ HDF+ +
Sbjct: 112 ----PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGHDFFIY 157
[216][TOP]
>UniRef100_C5D7S1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. WCH70 RepID=C5D7S1_GEOSW
Length = 182
Score = 70.5 bits (171), Expect = 1e-10
Identities = 48/175 (27%), Positives = 99/175 (56%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
I+G N+E++ A++++VE K+G+ ++++ ++ V ++ + + + + EVT+
Sbjct: 5 IRGENIEVTPALREYVEKKIGK-LERYFENTEDIHVHVNLKVYND-----KQGKIEVTIP 58
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
+ ++RAEE + Y +IDLV+ ++R++RK K K +L+ E L
Sbjct: 59 MPQL-LLRAEERHDDMYAAIDLVADKLERQIRKHKTKVN---------RKLRNKETKQVL 108
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+++ +E +++EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F
Sbjct: 109 VTQNNNPPVE----ENEEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157
[217][TOP]
>UniRef100_C9YZK5 Putative uncharacterized protein n=1 Tax=Streptomyces scabiei 87.22
RepID=C9YZK5_STRSC
Length = 241
Score = 70.5 bits (171), Expect = 1e-10
Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVG-RVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 366
V ++++GR E+ + ++HV +K+ IQK V +DV +S + R+ R
Sbjct: 12 VDIVVKGRKTEVPERFRKHVAEKLKLEKIQKLDGKVISLDVEVSKEPNPR--QADRSDRV 69
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
E+TL++ R V+RAE A Y ++DL + ++ +LRK +K +G RL +E
Sbjct: 70 EITLHS-RGPVIRAEAAASDPYAALDLAADKLEARLRKQHDKRYTR----RGARRLTAAE 124
Query: 185 VILPLPS----------EDEEDEIEITPQKDDEEELIEE---VVRTKYFDMPPLTVFEAI 45
V +P DEE + +K E+ E +VR K P+T+ +A+
Sbjct: 125 VADHVPGVATLNGNGYVADEEKAEGVPTKKIGSLEVKGEGPLIVREKTHVASPMTLDQAL 184
Query: 44 DQLEMVDHDFYAF 6
++E+V HDFY F
Sbjct: 185 YEMELVGHDFYLF 197
[218][TOP]
>UniRef100_C4W9L5 Ribosomal subunit interface protein n=1 Tax=Staphylococcus warneri
L37603 RepID=C4W9L5_STAWA
Length = 191
Score = 70.5 bits (171), Expect = 1e-10
Identities = 47/180 (26%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
++ I G N+ ++DA++ ++E+K+G++ + + + V V++ T T +
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYSNS-------TTKV 54
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
EVT+ K +RAEE + Y +DL+++ ++R++RK K + R +G + +E
Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGVDLITNKLERQVRKYKTRVNRKHRD-RGDQEVFVAE 112
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
V E +EI + +D + E++R+K F + P+ EA+ Q+ ++ HDF+ F
Sbjct: 113 V-----QEAPPEEISGAEENNDNDI---EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIF 164
[219][TOP]
>UniRef100_C2KSB4 Ribosome-associated inhibitor protein Y n=1 Tax=Mobiluncus mulieris
ATCC 35243 RepID=C2KSB4_9ACTO
Length = 209
Score = 70.5 bits (171), Expect = 1e-10
Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 15/194 (7%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR----T 375
+++ ++ RN E+ +++VE+K+ +V Q R VDV L+ R PR
Sbjct: 1 MEITLKARNAEIHPNFREYVEEKIAKVEQLAPRTQR-VDVELTHE------RNPRQVDTA 53
Query: 374 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN--- 204
R E+T++ K VVRAE + Y ++D+ + + +LR+ +++ +H R+ P+
Sbjct: 54 ERIEITVHGKGP-VVRAEASSSDRYAAVDIAAGKLYERLRRARDRIKNHRRYDIPPDVDL 112
Query: 203 -------RLKFSEVILPL-PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEA 48
+ K + V PL P E ED++ +P +VR K + P++V EA
Sbjct: 113 DVAMPEPQAKPAPVRAPLKPGEVREDQLGDSPV----------IVREKLHETTPVSVEEA 162
Query: 47 IDQLEMVDHDFYAF 6
+D++E+V H FY F
Sbjct: 163 LDEMELVGHPFYLF 176
[220][TOP]
>UniRef100_C2EGB2 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
salivarius ATCC 11741 RepID=C2EGB2_9LACO
Length = 184
Score = 70.5 bits (171), Expect = 1e-10
Identities = 52/179 (29%), Positives = 94/179 (52%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K+ ++G N+E++ A++++VE ++ ++ + D ST +T + E
Sbjct: 2 LKINVRGENIEVTGAIREYVEKRLAKL---EKFFDNTAD---STAHVNLKVYSDKTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ + V+RAEE + Y SIDLV+ ++R++RK K K R KG +F+
Sbjct: 56 VTIPLP-YLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKNFEFA-- 111
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
P DE++E+E + E+VRTK + P+ EA+ Q++M+ HDF+ +
Sbjct: 112 ----PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGHDFFIY 157
[221][TOP]
>UniRef100_C0W8H6 Ribosome-associated inhibitor protein Y n=1 Tax=Actinomyces
urogenitalis DSM 15434 RepID=C0W8H6_9ACTO
Length = 214
Score = 70.5 bits (171), Expect = 1e-10
Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 14/191 (7%)
Frame = -1
Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR----TRR 369
+ + GRN E+S ++ +VE+K +V ++ V+ V+V ++ R PR R
Sbjct: 3 ITVVGRNAEISSRLRDYVEEKATKV-EQFDPRVQRVEVEVTHE------RNPRQADTAER 55
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
E+T+ +K ++RAE + + + D+ + +LR+ ++++ DH R+ +
Sbjct: 56 AEITVISKGP-IIRAEASSSDRFAAFDIAMGKLTERLRRARDRKKDHRRYPVDVPEGTQA 114
Query: 188 EVILPLPSEDEEDE--IEITPQKDDEEELIEE--------VVRTKYFDMPPLTVFEAIDQ 39
L S E D+ IE +P+ E+ + E +VR K D P+TV EA+ Q
Sbjct: 115 PAAEELRSLHETDDAPIEDSPKAPTEKGVAVESQLGDSPVIVRQKLHDATPMTVDEALYQ 174
Query: 38 LEMVDHDFYAF 6
+E+V H FY F
Sbjct: 175 MELVGHPFYLF 185
[222][TOP]
>UniRef100_Q9K6W6 Ribosomal protein S30AE family n=1 Tax=Bacillus halodurans
RepID=Q9K6W6_BACHD
Length = 187
Score = 70.1 bits (170), Expect = 1e-10
Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 1/176 (0%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRCEVTL 354
++G N+E++ A++++VE KVG++ + V +V+VR+ EVT+
Sbjct: 5 VRGENLEVTPALREYVEKKVGKLERYFDTTPVADVNVRMQVLNNLHI--------IEVTI 56
Query: 353 YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP 174
R ++RAEE Y +IDLV ++R++RK K K R +G + F + P
Sbjct: 57 PMSRL-LLRAEEKHSDMYAAIDLVIEKLERQIRKHKTKVNRKFRQ-EGSLKYMFKNDLEP 114
Query: 173 LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ EE +E +E++L +VVR K F++ P+ EAI Q++M+ H+F+ F
Sbjct: 115 MDGMREEILLE------EEDDL--QVVRKKRFNLKPMDTEEAILQMDMLGHNFFVF 162
[223][TOP]
>UniRef100_C7XW84 Sigma 54 modulation protein/SSU ribosomal protein S30P n=1
Tax=Lactobacillus coleohominis 101-4-CHN
RepID=C7XW84_9LACO
Length = 179
Score = 70.1 bits (170), Expect = 1e-10
Identities = 53/180 (29%), Positives = 91/180 (50%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N++L+DA++ +VE ++ ++ + +L VD +T +T + E
Sbjct: 2 LKFNIRGENVDLTDAIRDYVEKRISKI---NKFLEDNVD---ATAHVNLKVYKNKTFKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ + +RAEE + Y SIDLV+ ++R++RK K K R KG L+F
Sbjct: 56 VTIPLP-YLTLRAEETSNDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF--- 110
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
P D E+ ++VRTK + P+ EA+ Q++M+ HDF+ F+
Sbjct: 111 ---------------VPGDDGTEDDSLKIVRTKEISLKPMDSEEAVLQMDMLGHDFFIFQ 155
[224][TOP]
>UniRef100_C7ME61 SSU ribosomal protein S30P/sigma 54 modulation protein n=1
Tax=Brachybacterium faecium DSM 4810 RepID=C7ME61_BRAFD
Length = 219
Score = 70.1 bits (170), Expect = 1e-10
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 17/196 (8%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR----T 375
+++ + GR+M++ D ++H+ DK+ +V Q +R VDV +S + PR +
Sbjct: 1 MEINVVGRHMDVPDRFRRHLTDKLDKVTQLAPAALR-VDVEISQE------KNPRQAELS 53
Query: 374 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR------HMK 213
R E+T++ + V+R+E A+ YG++D+ + +LR+ +++ DH R K
Sbjct: 54 DRVELTVH-ENGTVIRSEARADDLYGALDVAYGKLLERLRRARDRRKDHRRGRDRSHQGK 112
Query: 212 GPN-RLKFSEVILPLPSED------EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 54
G + R ++ LP P +D E E T + D E V+R K P++V
Sbjct: 113 GASLRTMPADQELPAPLQDLPPEPAEPAETPQTAETDLAEAGSPVVIREKKHPAKPMSVD 172
Query: 53 EAIDQLEMVDHDFYAF 6
+A+ +E+V HDF+ F
Sbjct: 173 DALYHMELVGHDFFLF 188
[225][TOP]
>UniRef100_B2GAI6 Ribosomal subunit interface protein n=3 Tax=Lactobacillus fermentum
RepID=B2GAI6_LACF3
Length = 181
Score = 70.1 bits (170), Expect = 1e-10
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVG---RVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 372
+K I+G N+E++DA++ +V ++ R ++ + V++++ + RT
Sbjct: 2 LKFNIRGENVEVTDAIRDYVVKRISKLERFLEPNVEANAHVNLKVYSN---------RTY 52
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
+ EVT+ + +RAEE + YGS+DLV+ ++R++RK K K R KG L+F
Sbjct: 53 KVEVTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGYKNLEF 110
Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
+ PSE+ E + ++VRTK + P+ EA+ Q++M+ HDF+
Sbjct: 111 VDT----PSEEVEASDSL------------KIVRTKQIPLKPMDSEEAVLQMDMLGHDFF 154
Query: 11 AFR 3
++
Sbjct: 155 VYQ 157
[226][TOP]
>UniRef100_C0FKQ0 Putative uncharacterized protein n=1 Tax=Clostridium sp. M62/1
RepID=C0FKQ0_9CLOT
Length = 175
Score = 70.1 bits (170), Expect = 1e-10
Identities = 55/179 (30%), Positives = 91/179 (50%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
++ I GRN++++ +++ V +K+G+ ++++ E + LS + + E
Sbjct: 1 MRYTITGRNIDVTPGLREAVIEKIGK-LERYFNQDTEAIITLSVTKDRQ--------KIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K H ++RAEE + Y SIDLV II+R+L+K K K D K + FSE+
Sbjct: 52 VTIPVKGH-IIRAEEQSTDMYVSIDLVEEIIERQLKKYKRKLID-----KKQAPVDFSEL 105
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ SE +DEI+I + K F M P+ EA Q+E++ H FY F
Sbjct: 106 FVQEESE-PDDEIKIE--------------KVKKFAMKPMDPEEACVQMELLGHSFYVF 149
[227][TOP]
>UniRef100_B6G1P8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6G1P8_9CLOT
Length = 190
Score = 70.1 bits (170), Expect = 1e-10
Identities = 47/182 (25%), Positives = 94/182 (51%)
Frame = -1
Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR 369
S +++ + G++++L+D +K + EDK+ ++ YL + +V+++ G ++
Sbjct: 7 SFMRVTVTGKHVKLTDGIKGYTEDKLKKL---GKYLDEDTEVKVTVSAG------KNRQK 57
Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
EV + +R EE + Y +IDLV + R++ K K+K + G +++
Sbjct: 58 VEVMIPNVNGHTIRVEEEQDNLYPAIDLVCDKLSRQIIKYKDK---FKTRVPGNFSIRYE 114
Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
+ EE E+ + ++ E +IE R K F++ P+++ EAI Q+ + DHDFY
Sbjct: 115 GI--------EELAQELDYEVEEPEVVIE---RRKKFNLKPMSIEEAILQMNLTDHDFYM 163
Query: 8 FR 3
F+
Sbjct: 164 FK 165
[228][TOP]
>UniRef100_B4BN91 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. G11MC16 RepID=B4BN91_9BACI
Length = 182
Score = 70.1 bits (170), Expect = 1e-10
Identities = 54/175 (30%), Positives = 100/175 (57%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
I+G N+E++ A++++VE K+G+ ++++ V V ++ + + G+G + EVT+
Sbjct: 5 IRGENIEVTPALREYVEKKIGK-LERYFDDTDHVHVNVNLKVYND-GQG----KIEVTIP 58
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
H ++RAEE + Y +IDLV+ ++R++RK K K + K +R K ++ P+
Sbjct: 59 IP-HLLLRAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVKLAAPV 112
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
P+ E +DEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F
Sbjct: 113 PNGAAAAE-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157
[229][TOP]
>UniRef100_Q00W70 Chloroplast-specific ribosomal protein (ISS) n=1 Tax=Ostreococcus
tauri RepID=Q00W70_OSTTA
Length = 184
Score = 70.1 bits (170), Expect = 1e-10
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Frame = -1
Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQK-HSYLVREVDVRLSTRGGGEFGRGPRTR 372
+ VK+++QG ++E++ A+ ++V K+GR S +REVDVR S RGG E +G
Sbjct: 48 TDVKMLVQGLHLEITPAIDEYVRSKIGRACSHVDSRDIREVDVRCSARGG-EGSKGGVEH 106
Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RH 219
+ EVT+ R + A+ E Y +ID + I+ R +RK KEK G RH
Sbjct: 107 KTEVTVLMTRGPTLHADGVGENLYATIDQCADIVTRSIRKHKEKHGGKGARH 158
[230][TOP]
>UniRef100_Q5HHR8 Uncharacterized protein SACOL0815 n=1 Tax=Staphylococcus aureus
subsp. aureus COL RepID=Y815_STAAC
Length = 190
Score = 70.1 bits (170), Expect = 1e-10
Identities = 46/180 (25%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
++ I G N+ ++DA++ ++E+K+G++ + + + V V++ T +
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNS-------ATKI 54
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
EVT+ K + +RAEE + Y IDL+++ ++R++RK K + R +G + +E
Sbjct: 55 EVTIPLK-NVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD-RGDQEVFVAE 112
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ E E ++ D+ E+ E++R+K F + P+ EA+ Q+ ++ HDF+ F
Sbjct: 113 L-------QEMQETQVDNDAYDDNEI--EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVF 163
[231][TOP]
>UniRef100_Q2YSH7 Uncharacterized protein SAB0704 n=35 Tax=Staphylococcus aureus
RepID=Y704_STAAB
Length = 190
Score = 70.1 bits (170), Expect = 1e-10
Identities = 46/180 (25%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
++ I G N+ ++DA++ ++E+K+G++ + + + V V++ T +
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNS-------ATKI 54
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
EVT+ K + +RAEE + Y IDL+++ ++R++RK K + R +G + +E
Sbjct: 55 EVTIPLK-NVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD-RGDQEVFVAE 112
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ E E ++ D+ E+ E++R+K F + P+ EA+ Q+ ++ HDF+ F
Sbjct: 113 L-------QEMQETQVDNDAYDDNEI--EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVF 163
[232][TOP]
>UniRef100_Q5HQX7 Uncharacterized protein SERP0419 n=3 Tax=Staphylococcus epidermidis
RepID=Y419_STAEQ
Length = 189
Score = 70.1 bits (170), Expect = 1e-10
Identities = 48/180 (26%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
++ I G N+ ++DA++ ++E+KVG++ + + + V VR+ T T +
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKVGKLERYFNNVPNAVAHVRVKTYSNS-------TTKI 54
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
EVT+ K +RAEE + Y IDL+++ ++R++RK K + + +H ++ F
Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRV--NRKHRDRGDQDIFVA 111
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ + + D+IE E ++ E++R+K F + P+ EA+ Q+ ++ HDF+ F
Sbjct: 112 EVQESTTNNHADDIE------SENDI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIF 163
[233][TOP]
>UniRef100_Q8ENI5 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis
RepID=Q8ENI5_OCEIH
Length = 185
Score = 69.7 bits (169), Expect = 2e-10
Identities = 51/179 (28%), Positives = 94/179 (52%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E++ A+K++VE K+ + ++++ DV ++ + +R E
Sbjct: 1 MKFNIRGENIEVTGAIKEYVEKKISK-LERYFDSAPNTDVHVNLSVYND------EQRIE 53
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ + ++R E Y ++DLV ++R++RK K K R P F+E+
Sbjct: 54 VTI-PMTNLLLRGEVQHIDLYAAVDLVVDKLERQIRKHKTKINRKFRQNGSPKHA-FAEM 111
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
E E + ++DE +L E+VRTK F++ P+ EAI Q++M+ H+F+ F
Sbjct: 112 ---------EKEARLAEDEEDENQL--EIVRTKRFNLKPMDSEEAILQMDMLGHEFFVF 159
[234][TOP]
>UniRef100_A4VTG7 Ribosome-associated protein Y (PSrp-1) n=6 Tax=Streptococcus suis
RepID=A4VTG7_STRSY
Length = 192
Score = 69.7 bits (169), Expect = 2e-10
Identities = 51/180 (28%), Positives = 97/180 (53%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I+G N+E+++A++ +VE+KV + I+K+ +E++ +++ + R +R +
Sbjct: 14 IKFSIRGENLEVTEALRTYVEEKVAK-IEKYFNEEQELNAKVNLKVY-------RDKRAK 65
Query: 362 VTLYTKRHGV-VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
V + V +RAE+ ++ YGSIDLV I+R++R+ K K R ++ E
Sbjct: 66 VEVTIPVGAVTLRAEDISQEMYGSIDLVVDKIERQIRRNKTKIERKHRQKVATGQVFTDE 125
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
++ E +E++ VVRTK D+ P+ + EA+ QLE++ HDF+ +
Sbjct: 126 LV-----EQTGEEVK--------------VVRTKQVDLKPMDMEEAVLQLELLGHDFFIY 166
[235][TOP]
>UniRef100_A4ISU0 Ribosomal subunit interface protein n=1 Tax=Geobacillus
thermodenitrificans NG80-2 RepID=A4ISU0_GEOTN
Length = 182
Score = 69.7 bits (169), Expect = 2e-10
Identities = 54/175 (30%), Positives = 100/175 (57%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
I+G N+E++ A++++VE K+G+ ++++ V V ++ + + G+G + EVT+
Sbjct: 5 IRGENIEVTPALREYVEKKIGK-LERYFDDTDHVHVNVNLKVYND-GQG----KIEVTIP 58
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
H ++RAEE + Y +IDLV+ ++R++RK K K + K +R K ++ P+
Sbjct: 59 IP-HLLLRAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVKLAAPV 112
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
P+ E +DEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F
Sbjct: 113 PNGAAAVE-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157
[236][TOP]
>UniRef100_Q8XIE9 30S ribosomal protein S30AE family n=1 Tax=Clostridium perfringens
RepID=Q8XIE9_CLOPE
Length = 179
Score = 69.3 bits (168), Expect = 2e-10
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K+ + +N+EL++A+K VE K+ + + K+ E LS +
Sbjct: 1 MKVTVHAKNIELTNALKDCVEKKISK-LSKYFEPGVEAKATLSVEKNKQI---------- 49
Query: 362 VTLYTKRHGVV-RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
V + +G++ R EE + Y SIDLV I+R++RK K + + R+ + L+F+
Sbjct: 50 VEIMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F
Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150
Query: 5 R 3
+
Sbjct: 151 Q 151
[237][TOP]
>UniRef100_B8FYZ1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Desulfitobacterium hafniense RepID=B8FYZ1_DESHD
Length = 175
Score = 69.3 bits (168), Expect = 2e-10
Identities = 56/179 (31%), Positives = 89/179 (49%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+ + ++G+ ME++DA+K++V +VG+ ++K+S +V V L G R E
Sbjct: 1 MNISVRGKQMEVTDALKEYVLKRVGK-LEKYSDEFMDVKVTLLVEEG--------RHRVE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT + ++R EE + Y SIDLV ++R++ K + + R LK E+
Sbjct: 52 VTAPLQGM-ILRGEEESGDMYASIDLVVEKLERQIDKYRTRINKRMR----TKVLKDHEI 106
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
P ED+ EEVVR K F P++V EAI Q+ +V H+FYAF
Sbjct: 107 EHPALYEDDS----------------EEVVRHKKFGTKPMSVEEAIMQMNLVGHNFYAF 149
[238][TOP]
>UniRef100_Q1GB46 Ribosomal protein S30EA n=2 Tax=Lactobacillus delbrueckii
RepID=Q1GB46_LACDA
Length = 185
Score = 69.3 bits (168), Expect = 2e-10
Identities = 50/180 (27%), Positives = 100/180 (55%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K ++G N+E+++A++ +VE ++ + ++K+ L ++V ++ + + + + E
Sbjct: 2 LKYNVRGENIEVTEALRDYVEKRLTK-LEKYFDLSQDVIAHVNLKVYRD-----HSAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ + V+RAEE + Y SID VS ++R++RK K + R KG E
Sbjct: 56 VTIPLP-YLVLRAEETTDDMYRSIDFVSEKLERQIRKYKTRVNRKSRE-KG-----VEEF 108
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
+P + EE+++E P + ++VR K ++ P+ EAI Q++M++HDF+ F+
Sbjct: 109 FIPEDAPVEEEKVEKAP--------MFKIVRNKRVNLKPMDPEEAILQMDMLEHDFFVFQ 160
[239][TOP]
>UniRef100_C4GCR0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles
DSM 14600 RepID=C4GCR0_9FIRM
Length = 176
Score = 69.3 bits (168), Expect = 2e-10
Identities = 59/179 (32%), Positives = 88/179 (49%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K I GRN+EL+D +K VED + K RE + T + G+ R E
Sbjct: 1 MKTTITGRNIELTDGLKSAVED----ALSKLDRYFREDTLAHVTMSVDKAGQ-----RVE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
+T+ K G+VR E+ + Y SID S I+ +L K + K D R KG
Sbjct: 52 LTIPVKG-GIVRCEKTTDDMYVSIDAASEGIEDQLTKYRHKLVD--RAHKG--------A 100
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+L E+ DE D+EEE+ ++VRTK FD+ P+ +A Q+E++ H F+ F
Sbjct: 101 VLNAAFEEGFDE-------DEEEEI--KIVRTKKFDLKPMYAEDACAQMELLGHSFFVF 150
[240][TOP]
>UniRef100_C6VLR5 Ribosomal protein S30EA n=3 Tax=Lactobacillus plantarum
RepID=C6VLR5_LACPJ
Length = 188
Score = 69.3 bits (168), Expect = 2e-10
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVD----VRLSTRGGGEFGRGPRTRRCE 363
I+G N+E++ A++ +V+ +VG++ Y VD V L +T + E
Sbjct: 6 IRGENIEVTQAIRDYVQKRVGKL---QKYFDNNVDSIAHVNLKVHPD-------KTAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ + V+RAEE + Y S+DLV+ ++R++RK K K R KG + F+
Sbjct: 56 VTIPLP-YLVLRAEETSPDMYASVDLVTDKLERQIRKYKTKVNRKSRE-KGYKAIDFAAT 113
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
DE D +++L +VVRTK + P+ EAI Q++M+ HDF+ +
Sbjct: 114 ----------DETVAAADNDQDDKL--DVVRTKRVALKPMDNEEAILQMDMLGHDFFIY 160
[241][TOP]
>UniRef100_C2EM10 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
ultunensis DSM 16047 RepID=C2EM10_9LACO
Length = 181
Score = 69.3 bits (168), Expect = 2e-10
Identities = 50/179 (27%), Positives = 95/179 (53%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K ++G N+E++DA++ +VE ++ + ++K+ L ++V ++ R + + + E
Sbjct: 2 LKYNVRGENIEVTDALRSYVEKRLNK-LEKYFELSQDVIAHVNLRVYRD-----HSAKVE 55
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ + V+RAEE+ + Y SID VS ++R++RK K + R KG +
Sbjct: 56 VTIPLP-YLVLRAEENTDDMYRSIDFVSEKLERQIRKYKTRVNRKSRE-KG-----MQDF 108
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+ P E+E+ E ++VR K + P+ EAI Q++M++HDF+ F
Sbjct: 109 FVEQPEEEEKKPSEF------------DIVRNKRVSLKPMDPEEAILQMDMLEHDFFVF 155
[242][TOP]
>UniRef100_C0X601 Ribosome-associated inhibitor protein Y n=22 Tax=Enterococcus
faecalis RepID=C0X601_ENTFA
Length = 189
Score = 69.3 bits (168), Expect = 2e-10
Identities = 53/175 (30%), Positives = 93/175 (53%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
++G N+E+++A++ +VE KVG+ ++++ E V ++ + E +T + EVT+
Sbjct: 12 VRGENIEVTEAIRDYVEKKVGK-LERYFSDSPEATVHVNLKVYTE-----KTAKVEVTIP 65
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
+ V+RAEE + Y SIDLV ++R++RK K K R G N K + ++
Sbjct: 66 LP-YLVLRAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSRE-TGRNNTKAAVFLV-- 121
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+E E TP + D +VRTK + P+ EA+ Q+ M+ H+F+ F
Sbjct: 122 -----GEETEETPSELD-------IVRTKRLSLKPMDSEEAVLQMNMLGHNFFIF 164
[243][TOP]
>UniRef100_C0VZW2 Ribosome-associated inhibitor protein Y n=1 Tax=Actinomyces
coleocanis DSM 15436 RepID=C0VZW2_9ACTO
Length = 220
Score = 69.3 bits (168), Expect = 2e-10
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 18/198 (9%)
Frame = -1
Query: 545 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---- 378
++ + I GRN E+ + +VE+KV +V Q + R +DV L+ R PR
Sbjct: 4 TMDITIVGRNAEIHPNFRAYVEEKVAKVTQLYPRAQR-IDVELTHE------RNPRQAET 56
Query: 377 TRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 198
R E+T++ K ++RAE + + ++D+ + +LR+ +++ DH R P +
Sbjct: 57 AERIELTVFGKGP-IIRAEASSSDRHAAVDIAVGKLFERLRRARDRAKDHRRRYDTPIAV 115
Query: 197 KFSEVILPLPSEDEEDEIEITPQKDDEE-------ELIEE-------VVRTKYFDMPPLT 60
++ P E E +E +T ++ E+ EE +VR K + P+T
Sbjct: 116 DLGGIV---PDEVEVEEAPVTAEESLRSAADLKPGEVREEQFGDSPVIVRQKLHEAEPMT 172
Query: 59 VFEAIDQLEMVDHDFYAF 6
V +A+ Q+E+V H F+ F
Sbjct: 173 VDQALYQMELVGHPFFLF 190
[244][TOP]
>UniRef100_B9CQX8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus capitis
SK14 RepID=B9CQX8_STACP
Length = 191
Score = 69.3 bits (168), Expect = 2e-10
Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
++ I G N+ ++DA++ ++EDK+G++ + + + V V++ T +
Sbjct: 2 IRFEIHGDNLTITDAIRNYIEDKIGKLERYFNNVPNAVAHVKVKTYSNS-------ATKI 54
Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
EVT+ K +RAEE + Y IDL++ ++R++RK K + R +G + +E
Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGIDLITGKLERQVRKYKTRVNRKHRD-RGDQEVFVAE 112
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
V E E+ + + E+ E++R+K F + P+ EA+ Q+ ++ HDF+ F
Sbjct: 113 V-----QEASPGEVSGAEESVSDSEI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIF 165
[245][TOP]
>UniRef100_Q0SR10 Ribosomal subunit interface protein n=1 Tax=Clostridium perfringens
SM101 RepID=Q0SR10_CLOPS
Length = 179
Score = 68.9 bits (167), Expect = 3e-10
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K+ + +N+EL++A+K VE K+ + + K+ E LS +
Sbjct: 1 MKVTVHAKNIELTNALKDCVEKKISK-LSKYFEPGVEAKATLSVEKNKQI---------- 49
Query: 362 VTLYTKRHGVV-RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
V + +G++ R EE + Y SIDLV I+R++RK K + + R+ + L+F+
Sbjct: 50 VEVMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F
Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150
Query: 5 R 3
+
Sbjct: 151 Q 151
[246][TOP]
>UniRef100_C6LIX7 Ribosomal subunit interface protein n=1 Tax=Bryantella
formatexigens DSM 14469 RepID=C6LIX7_9FIRM
Length = 176
Score = 68.9 bits (167), Expect = 3e-10
Identities = 51/180 (28%), Positives = 98/180 (54%), Gaps = 1/180 (0%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
++ I G+N+E+++ ++ V DK+G+ ++++ E+ V +S ++ E
Sbjct: 1 MRFTISGKNIEITEGLRTTVMDKLGK-LERYFTPDTEIIVTMSVE--------KERQKIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN-RLKFSE 186
VT+ K + ++R+E+ + Y SIDLV +I+R+LRK K K +H +G N R +F E
Sbjct: 52 VTIPVKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKLI--AKHQEGSNFRREFIE 108
Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
+E+ +E EE+ ++RTK+F + P+ +A Q+E++ H+F+ F
Sbjct: 109 ---------KEETVE-------PEEV--NIIRTKHFGIKPMYPEDACIQMELLGHNFFVF 150
[247][TOP]
>UniRef100_C6JE61 Putative uncharacterized protein n=1 Tax=Ruminococcus sp.
5_1_39BFAA RepID=C6JE61_9FIRM
Length = 175
Score = 68.9 bits (167), Expect = 3e-10
Identities = 51/179 (28%), Positives = 91/179 (50%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K II G+N+ +++ +K V+DK+ + ++++ EV V LS ++ E
Sbjct: 1 MKFIISGKNITVTEGLKTAVQDKLSK-LERYFTPDTEVVVTLSVE--------KERQKIE 51
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
VT+ K + ++R+E+ + Y SIDLV +I+R+LRK K K D K F +
Sbjct: 52 VTIPVKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVD-----KQQAAANFQKA 105
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
L KD +E+ +++RTK F + P+ +A Q+E++ H+F+ F
Sbjct: 106 YL---------------DKDYDEDEEVKIIRTKKFGIKPMYPEDACVQMELLGHNFFVF 149
[248][TOP]
>UniRef100_B2TK14 Ribosome-associated protein Y n=3 Tax=Clostridium botulinum
RepID=B2TK14_CLOBB
Length = 177
Score = 68.9 bits (167), Expect = 3e-10
Identities = 52/180 (28%), Positives = 94/180 (52%)
Frame = -1
Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
+K+I+ +N+EL++A+++ VE K+ + + K+ E LS + R R+
Sbjct: 1 MKVIVIAKNIELTNALREMVEKKISK-LGKYFNSDIEAKATLSVQ---------RNRQIV 50
Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
+ V+R EE E Y +IDLV+ ++R++RK K K + K LKF E+
Sbjct: 51 EVMIPFNGVVLRGEEANEDMYRAIDLVAEKLERQIRKQKTKLS-----RKKSGSLKFGEI 105
Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
+ +++P DEEE ++V+ K F + P+ + EAI Q+E+V H+F+ ++
Sbjct: 106 V------------DLSPVAVDEEEA--KLVKRKRFGVKPMDIDEAILQMELVGHNFFVYQ 151
[249][TOP]
>UniRef100_C5NVZ2 Ribosome-associated factor Y n=1 Tax=Gemella haemolysans ATCC 10379
RepID=C5NVZ2_9BACL
Length = 181
Score = 68.9 bits (167), Expect = 3e-10
Identities = 51/175 (29%), Positives = 94/175 (53%)
Frame = -1
Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
++G N+E++ A++++VE+KV + ++K+ E +V + + ++ E+T+
Sbjct: 6 VRGENLEITQAIREYVENKVSK-LEKYFADSLEANVYANAKVYKN-----NKKKIEITV- 58
Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
R +RAEE E Y ++DLV ++R++RK K K GR KG F+E
Sbjct: 59 PLRGVTLRAEETNEDLYAAVDLVVDKLERQMRKHKTKINRKGRE-KG-----FAE----- 107
Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
EI +T + ++ EE ++ + K + P+T EA+ Q+E++ HDF+AF
Sbjct: 108 -------EIILTSELEEAEETTLDLGKVKQLKVEPMTREEAVFQMELLGHDFFAF 155
[250][TOP]
>UniRef100_C4E796 SSU ribosomal protein S30P; sigma 54 modulation protein n=1
Tax=Streptosporangium roseum DSM 43021
RepID=C4E796_STRRS
Length = 218
Score = 68.9 bits (167), Expect = 3e-10
Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 17/195 (8%)
Frame = -1
Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT 357
+I++GR+ +SD + HV K+ R I++ + + VDV ++ G R R E+T
Sbjct: 3 IIVKGRHTGVSDRFRDHVTTKLAR-IERLDHKLISVDVEVTKESNPRI-IGQR-ERVELT 59
Query: 356 LYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK-ETDHGRHMKGPNRLKFS--- 189
+++ R VRAE A+ + ++D+ ++ +LR++ ++ + HG H P+ + +
Sbjct: 60 IHS-RGPAVRAEATADDRFAALDIALGKLEGRLRRLADRRKIHHGNHCP-PSLAELAATA 117
Query: 188 -----EVILPLPSEDEEDEIEITPQKDDEEELIEE--------VVRTKYFDMPPLTVFEA 48
E + P P E+ E + + +++ ++ VVR K P+T+ +A
Sbjct: 118 LAETLEAVPPRPREEPEVQSDFEADLSEDKTIVPIHMDGDGPLVVREKAHQADPMTIDQA 177
Query: 47 IDQLEMVDHDFYAFR 3
+ ++E+V HDFY FR
Sbjct: 178 LLEMELVGHDFYLFR 192