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[1][TOP] >UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6T7E3_SOYBN Length = 291 Score = 297 bits (760), Expect = 5e-79 Identities = 154/192 (80%), Positives = 169/192 (88%) Frame = -1 Query: 578 SISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGG 399 S MSWDGPLSSVKL IQG+N+EL+DAVKQHVEDKVG+ +QKHS+LVREVDVRLS RGGG Sbjct: 58 SAHMSWDGPLSSVKLTIQGKNLELTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGG 117 Query: 398 EFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 219 EFGRGPRTRRCEVTL+TKRHGVVRAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGRH Sbjct: 118 EFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRH 177 Query: 218 MKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQ 39 MKG NRLK E + LP EEDEI ++PQ +EEE I+EVVRTKYFDMPPLTV EAI+Q Sbjct: 178 MKGFNRLKVREPVEQLPV--EEDEI-LSPQ--EEEESIDEVVRTKYFDMPPLTVAEAIEQ 232 Query: 38 LEMVDHDFYAFR 3 LE VDHDFY FR Sbjct: 233 LENVDHDFYGFR 244 [2][TOP] >UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001984F94 Length = 298 Score = 278 bits (711), Expect = 2e-73 Identities = 138/200 (69%), Positives = 168/200 (84%) Frame = -1 Query: 602 TTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDV 423 TT++ ++ MSWDGPLSSVKLI+QG+N+EL+D V+ HVE+KVG+ +QKHS+LVREVDV Sbjct: 58 TTRQTKPLAVRMSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDV 117 Query: 422 RLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 243 RLS RGG E G+GP+ RRCEVTL+TK+HGVVRAEEHAET YGSID+VSSIIQRKLRKIKE Sbjct: 118 RLSIRGG-ELGKGPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKE 176 Query: 242 KETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPL 63 K++DHGRHMKG NRLK + PL E+E ++ PQK+D +LI E+VRTKYFDMPPL Sbjct: 177 KDSDHGRHMKGFNRLKVRDPETPL----VEEEADVVPQKED-GDLINEIVRTKYFDMPPL 231 Query: 62 TVFEAIDQLEMVDHDFYAFR 3 TV EA++QLE VDHDF+ FR Sbjct: 232 TVPEAVEQLENVDHDFFGFR 251 [3][TOP] >UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR Length = 306 Score = 277 bits (708), Expect = 5e-73 Identities = 144/200 (72%), Positives = 162/200 (81%) Frame = -1 Query: 602 TTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDV 423 T G S+ MSWDGPL SVKLIIQG+N+EL+D VK+HVEDKVG+ +QKHS+LVREVDV Sbjct: 66 TPLTHGGCSVKMSWDGPLHSVKLIIQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDV 125 Query: 422 RLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 243 RLS RGG E G+GPR RRCEVTL+T RHGVVRAEE AET Y SIDLVSSIIQRKLRKIKE Sbjct: 126 RLSVRGG-ELGKGPRIRRCEVTLFTNRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKE 184 Query: 242 KETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPL 63 KE+DHGRHMKG NRLK E P+P E D E++ Q + E+ IEEVVRTK+FDMPPL Sbjct: 185 KESDHGRHMKGFNRLKVRE---PVPQVVEGDADEVSQQ--EVEDSIEEVVRTKFFDMPPL 239 Query: 62 TVFEAIDQLEMVDHDFYAFR 3 TV EAI+QLE VDHDFY FR Sbjct: 240 TVSEAIEQLENVDHDFYGFR 259 [4][TOP] >UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7QEV5_VITVI Length = 230 Score = 274 bits (700), Expect = 5e-72 Identities = 136/189 (71%), Positives = 162/189 (85%) Frame = -1 Query: 569 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 390 MSWDGPLSSVKLI+QG+N+EL+D V+ HVE+KVG+ +QKHS+LVREVDVRLS RGG E G Sbjct: 1 MSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGG-ELG 59 Query: 389 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 210 +GP+ RRCEVTL+TK+HGVVRAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG Sbjct: 60 KGPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKG 119 Query: 209 PNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 30 NRLK + PL E+E ++ PQK+D +LI E+VRTKYFDMPPLTV EA++QLE Sbjct: 120 FNRLKVRDPETPL----VEEEADVVPQKED-GDLINEIVRTKYFDMPPLTVPEAVEQLEN 174 Query: 29 VDHDFYAFR 3 VDHDF+ FR Sbjct: 175 VDHDFFGFR 183 [5][TOP] >UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SEK8_RICCO Length = 311 Score = 273 bits (699), Expect = 6e-72 Identities = 138/198 (69%), Positives = 166/198 (83%) Frame = -1 Query: 596 KRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRL 417 KR +++ MSW+GPLSSVKLI QG+N+EL+D VK+HVEDKVG+ +QKHS+LVREVDVRL Sbjct: 70 KRGRRSAVRMSWEGPLSSVKLITQGKNLELTDTVKKHVEDKVGKAVQKHSHLVREVDVRL 129 Query: 416 STRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 237 S RGG EFG+GP+ RRCEVTL+TK+HGV+RAEE AET Y SIDLVSSIIQRKLRKIKEK Sbjct: 130 SVRGG-EFGKGPKIRRCEVTLFTKKHGVIRAEEDAETIYASIDLVSSIIQRKLRKIKEKV 188 Query: 236 TDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTV 57 +DHGRHMKG NRLK E + P +D+ DE++ D++E+ I+EVVRTKYFDMPPLTV Sbjct: 189 SDHGRHMKGFNRLKVREPVAE-PVKDDTDEVD-GVLGDEDEDYIDEVVRTKYFDMPPLTV 246 Query: 56 FEAIDQLEMVDHDFYAFR 3 EAI+QL+ VDHDFY FR Sbjct: 247 SEAIEQLKNVDHDFYGFR 264 [6][TOP] >UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa RepID=A9PHY3_POPTR Length = 306 Score = 273 bits (697), Expect = 1e-71 Identities = 140/195 (71%), Positives = 162/195 (83%) Frame = -1 Query: 587 GAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTR 408 G +SI MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS R Sbjct: 70 GGSSIRMSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVR 129 Query: 407 GGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 228 GG E G+GPR RRCEVTL+TKRHGVVRAEE AET + SIDLVSSIIQRKLRKIK+KE+DH Sbjct: 130 GG-ELGKGPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDH 188 Query: 227 GRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEA 48 GRHMKG NRLK E + + ED+ DE+ + ++E+ IEEVVRTKYFDMPPLTV EA Sbjct: 189 GRHMKGFNRLKVREPMHQVVVEDDADEV----SQQEDEDYIEEVVRTKYFDMPPLTVSEA 244 Query: 47 IDQLEMVDHDFYAFR 3 I+QLE V HDFY FR Sbjct: 245 IEQLEHVHHDFYGFR 259 [7][TOP] >UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis thaliana RepID=Q9FLV3_ARATH Length = 365 Score = 271 bits (692), Expect = 4e-71 Identities = 132/197 (67%), Positives = 167/197 (84%), Gaps = 1/197 (0%) Frame = -1 Query: 590 RGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLST 411 R + ++ MSWDGPL+SVKLIIQG+N+ELS+ +KQHVE+KVG+ +QKHS+LVREVDVRLS Sbjct: 123 RSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSV 182 Query: 410 RGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 231 RGG EFG+GPR RRCEVTL+TK+HGVVRAEE AET Y IDLVS+IIQRKLRKIKEK++D Sbjct: 183 RGG-EFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSD 241 Query: 230 HGRHMKGPNRLKFSEVILPLPSEDEEDEIEIT-PQKDDEEELIEEVVRTKYFDMPPLTVF 54 HGRHMKG NRLK E ++ ED ED + + ++++E++LI+E+VRTK F+MPPLTV Sbjct: 242 HGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVA 301 Query: 53 EAIDQLEMVDHDFYAFR 3 EA++QLE+V HDFY F+ Sbjct: 302 EAVEQLELVSHDFYGFQ 318 [8][TOP] >UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR Length = 231 Score = 267 bits (683), Expect = 4e-70 Identities = 137/189 (72%), Positives = 158/189 (83%) Frame = -1 Query: 569 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 390 MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS RGG E G Sbjct: 1 MSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELG 59 Query: 389 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 210 +GPR RRCEVTL+TKRHGVVRAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG Sbjct: 60 KGPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKG 119 Query: 209 PNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 30 NRLK E + + ED+ DE+ + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE Sbjct: 120 FNRLKVREPMHQVVVEDDADEV----SQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEH 175 Query: 29 VDHDFYAFR 3 V HDFY FR Sbjct: 176 VHHDFYGFR 184 [9][TOP] >UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea RepID=RR30_SPIOL Length = 302 Score = 255 bits (652), Expect = 2e-66 Identities = 130/194 (67%), Positives = 155/194 (79%), Gaps = 3/194 (1%) Frame = -1 Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGE 396 + MSWDGPLSSVKLI+QGRN+E+SD V+ HVEDKVG+ + KHS+LVREVDVRLS RGG + Sbjct: 64 VCMSWDGPLSSVKLILQGRNLEVSDNVRSHVEDKVGKSVAKHSHLVREVDVRLSARGG-D 122 Query: 395 FGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM 216 +GP+ RRCEVTL+TKRHGV+RAEE AE+ Y SIDLVSSIIQRKLRKIK+K +DHGRHM Sbjct: 123 LSKGPKLRRCEVTLFTKRHGVIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHM 182 Query: 215 KGPNRLKFSE---VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAI 45 KG NR K + V + EE E P ++++ IEEVVRTKYFDMPPLT+ EA+ Sbjct: 183 KGFNRSKVRDPEPVRITREEVLEEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAV 242 Query: 44 DQLEMVDHDFYAFR 3 +QLE VDHDFYAFR Sbjct: 243 EQLENVDHDFYAFR 256 [10][TOP] >UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum RepID=C9EFD1_SOLTU Length = 280 Score = 250 bits (638), Expect = 7e-65 Identities = 127/196 (64%), Positives = 157/196 (80%), Gaps = 5/196 (2%) Frame = -1 Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGE 396 + MSWDGPLSSVKLI+QG+N+EL+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E Sbjct: 46 VRMSWDGPLSSVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-E 104 Query: 395 FGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM 216 G+GP+ RRCEVTL+TK+HGV+RAEE AE+ YGSID+VSSIIQRKLRKIKEK++DHGRHM Sbjct: 105 LGKGPKIRRCEVTLFTKKHGVIRAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHM 164 Query: 215 KGPNRLKFSEVILPLPSED-----EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFE 51 KG +RLK + + L ED +E+E+E D + + EVVR K FDMPPL+V E Sbjct: 165 KGFDRLKVRDPEVLLVQEDLETLPQEEEVE---DDDKSDGFVTEVVRKKSFDMPPLSVNE 221 Query: 50 AIDQLEMVDHDFYAFR 3 AI+QLE VDHDFY FR Sbjct: 222 AIEQLENVDHDFYGFR 237 [11][TOP] >UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum RepID=Q672Q2_SOLLC Length = 311 Score = 244 bits (623), Expect = 4e-63 Identities = 125/196 (63%), Positives = 154/196 (78%), Gaps = 5/196 (2%) Frame = -1 Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGE 396 + MSWDGPLSSVKLI+QG+N+EL+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E Sbjct: 74 VRMSWDGPLSSVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-E 132 Query: 395 FGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM 216 G+GP+ RRCEVTL+TK+HGV+RAEE E+ YGSID+VSSIIQRKLRKIKEK++D GRHM Sbjct: 133 LGKGPKIRRCEVTLFTKKHGVIRAEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHM 192 Query: 215 KGPNRLKFSEVILPLPSED-----EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFE 51 KG +RLK + L ED +E+E+E D + + EVVR K FDMPPL+V E Sbjct: 193 KGFDRLKVRDPEALLVQEDLETLSQEEEVE----DDKSDGFVTEVVRKKSFDMPPLSVNE 248 Query: 50 AIDQLEMVDHDFYAFR 3 AI+QLE VDHDFY FR Sbjct: 249 AIEQLENVDHDFYGFR 264 [12][TOP] >UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6TFU4_SOYBN Length = 208 Score = 232 bits (591), Expect = 2e-59 Identities = 119/163 (73%), Positives = 138/163 (84%) Frame = -1 Query: 608 TTTTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV 429 T+T+ R + S MSWDGPLSSVKLIIQG+N+EL+DAVK+HVEDKVG+ +QKHS+LVREV Sbjct: 48 TSTSNRGRSLSTRMSWDGPLSSVKLIIQGKNLELTDAVKRHVEDKVGKAVQKHSHLVREV 107 Query: 428 DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKI 249 DVRLS RGGGEFGRGPRTRRCEVTL+TKRHGVVRAEE AE+TYGSIDLVSSIIQRKLRKI Sbjct: 108 DVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKI 167 Query: 248 KEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDD 120 KEK +DHGRHMKG NRLK P DEI ++P++++ Sbjct: 168 KEKVSDHGRHMKGFNRLKLGS---PWSITYGRDEI-LSPREEE 206 [13][TOP] >UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum bicolor RepID=C5WRX8_SORBI Length = 310 Score = 231 bits (588), Expect = 5e-59 Identities = 119/200 (59%), Positives = 155/200 (77%), Gaps = 2/200 (1%) Frame = -1 Query: 596 KRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRL 417 +RR + S+ M+WDGPLSSV+LI+QGRN++LSD +K+H+EDKVGR + KH +LVREVDVRL Sbjct: 54 RRRVSFSVRMAWDGPLSSVRLIMQGRNVKLSDKLKEHIEDKVGRAVSKHCHLVREVDVRL 113 Query: 416 STRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 237 S R GGE GRGP+T RCE+TL++KRHGV+RAEE AE+TY SIDL ++II+RKLRKIKEKE Sbjct: 114 SAR-GGELGRGPKTSRCEITLFSKRHGVLRAEEDAESTYASIDLAAAIIKRKLRKIKEKE 172 Query: 236 TDHGRHMKGPNRLKFSEVILPLPSED--EEDEIEITPQKDDEEELIEEVVRTKYFDMPPL 63 T+ R G + E LPL +D E DE+ +DE+ ++ +VVRTK F+MPPL Sbjct: 173 TEVRRDGDGGAGGAWEEE-LPLLDDDLVEADELAAAVGAEDEQTVVAKVVRTKVFEMPPL 231 Query: 62 TVFEAIDQLEMVDHDFYAFR 3 TV EA++QL+ V H+FY FR Sbjct: 232 TVEEALEQLDNVGHNFYCFR 251 [14][TOP] >UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays RepID=B6TYP8_MAIZE Length = 309 Score = 231 bits (588), Expect = 5e-59 Identities = 120/202 (59%), Positives = 154/202 (76%), Gaps = 2/202 (0%) Frame = -1 Query: 602 TTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDV 423 T +RR + S+ M+WDGPLSSV+LI+Q RN +LS+ +K+H+EDKVGR + KH +LVREVDV Sbjct: 52 TRRRRVSVSVRMAWDGPLSSVRLIMQSRNAKLSEKLKEHIEDKVGRAVSKHCHLVREVDV 111 Query: 422 RLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 243 RLS RGG E GRGP+T RCE+TL+TKRHGV+RAEE AE+TY SIDL ++I++RKLRKIKE Sbjct: 112 RLSARGG-ELGRGPKTSRCEITLFTKRHGVLRAEEDAESTYASIDLAAAIVKRKLRKIKE 170 Query: 242 KETDHGRHMKGPNRLKFSEVILP--LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMP 69 KET+ R G + + I P L E D++E +DEE ++ +VVRTK F+MP Sbjct: 171 KETEVRR---GGDADGVWDEIPPADLLPPAEADDLEAAVGAEDEETVLAKVVRTKVFEMP 227 Query: 68 PLTVFEAIDQLEMVDHDFYAFR 3 PLTV EA++QLE VDHDFY FR Sbjct: 228 PLTVEEALEQLENVDHDFYCFR 249 [15][TOP] >UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ Length = 309 Score = 225 bits (573), Expect = 2e-57 Identities = 118/204 (57%), Positives = 155/204 (75%), Gaps = 5/204 (2%) Frame = -1 Query: 599 TKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 420 ++R A S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR Sbjct: 62 SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121 Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240 LS RGG E RGP+ RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180 Query: 239 ETDHGRHMKG--PNRLKFSEVILPLPSEDEE---DEIEITPQKDDEEELIEEVVRTKYFD 75 ETD RH+KG P + +L +D + ++E +DE+ ++ +VVRTK F+ Sbjct: 181 ETD-VRHLKGTKPPVSDWPPSLLDNNDDDAQAQLKDLEEAVGAEDEDTVLTKVVRTKVFE 239 Query: 74 MPPLTVFEAIDQLEMVDHDFYAFR 3 MPPL+V EA++QL VDH+FYAFR Sbjct: 240 MPPLSVEEAMEQLVNVDHNFYAFR 263 [16][TOP] >UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x Populus deltoides RepID=A9PJW3_9ROSI Length = 268 Score = 219 bits (558), Expect = 1e-55 Identities = 116/164 (70%), Positives = 134/164 (81%) Frame = -1 Query: 587 GAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTR 408 G +SI MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS R Sbjct: 70 GGSSIRMSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVR 129 Query: 407 GGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 228 GG E G+GPR RRCEVTL+TKRHGVVRAEE AET Y SIDL SSIIQRKLRKIK+KE+DH Sbjct: 130 GG-ELGKGPRIRRCEVTLFTKRHGVVRAEEDAETIYASIDLASSIIQRKLRKIKDKESDH 188 Query: 227 GRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEV 96 GRHMKG NRLK E P+ E+D E++ Q+D E+ IEEV Sbjct: 189 GRHMKGFNRLKVRE---PMHQVVEDDADEVSQQED--EDYIEEV 227 [17][TOP] >UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LMC5_PICSI Length = 321 Score = 218 bits (555), Expect = 3e-55 Identities = 118/207 (57%), Positives = 152/207 (73%), Gaps = 8/207 (3%) Frame = -1 Query: 599 TKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 420 T RG + ++ W GPLSSV+LIIQG+N +L+DAVK ++E+KVG +QKH+ LVREVDVR Sbjct: 70 TSSRGQINCTL-WSGPLSSVRLIIQGKNFQLTDAVKAYIEEKVGIAVQKHANLVREVDVR 128 Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240 LS RGG E G+GP+ RRCEVTL+TK+HGVVRAEE AET Y SID+VS II+RKLRKIKEK Sbjct: 129 LSIRGG-EVGKGPKIRRCEVTLFTKKHGVVRAEEEAETIYASIDIVSDIIRRKLRKIKEK 187 Query: 239 ETDHGRHMKGPNRLKFSEVILPLPSEDEED-EIEITPQKDDEE-------ELIEEVVRTK 84 + HGR K + K E++ + + +E + E+ D EE +L +EVVRTK Sbjct: 188 DGGHGRPSKMRKQPKLGELLSTVVMDVKETRDKELDDLADVEEMRYEKIDDLSDEVVRTK 247 Query: 83 YFDMPPLTVFEAIDQLEMVDHDFYAFR 3 YF+MPP++ EA++QL VDHDFYAFR Sbjct: 248 YFEMPPMSPEEALEQLMNVDHDFYAFR 274 [18][TOP] >UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group RepID=C6YXL0_ORYSJ Length = 321 Score = 212 bits (540), Expect = 2e-53 Identities = 113/202 (55%), Positives = 149/202 (73%), Gaps = 5/202 (2%) Frame = -1 Query: 599 TKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 420 ++R A S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR Sbjct: 62 SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121 Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240 LS RGG E RGP+ RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180 Query: 239 ETDHGRHMKG--PNRLKFSEVILPLPSEDEE---DEIEITPQKDDEEELIEEVVRTKYFD 75 ETD RH+KG P + +L +D + ++E +DE+ ++ VVRTK F+ Sbjct: 181 ETD-VRHLKGTKPPVSDWPPSLLDNNDDDAQAQLKDLEEAVGAEDEDTVLTRVVRTKVFE 239 Query: 74 MPPLTVFEAIDQLEMVDHDFYA 9 MPPL+ EA++QL DH F+A Sbjct: 240 MPPLSGEEAMEQLGNGDHTFHA 261 [19][TOP] >UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TA00_PHYPA Length = 297 Score = 197 bits (500), Expect = 7e-49 Identities = 107/197 (54%), Positives = 140/197 (71%) Frame = -1 Query: 593 RRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS 414 ++G + M+W G L+ V+L+IQG+++EL+DA+KQ+VE+KVG + S LV+EVDVR+S Sbjct: 71 QKGRVTTCMAWGGTLAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMS 130 Query: 413 TRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 234 RGG E GRG R +RCEVTL+TK+HGVVRAEE AE+ Y SID VS +I RKLRKIKEK+ Sbjct: 131 VRGG-ETGRGERLQRCEVTLFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDG 189 Query: 233 DHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 54 HGR K R+ EV+ S + D I +K D +L +EVVRTKYF+M P+ Sbjct: 190 GHGRPAKYSPRI--GEVL----SNEVVDLDPILERKPD--DLPDEVVRTKYFEMRPMKPL 241 Query: 53 EAIDQLEMVDHDFYAFR 3 EA++QL V HDFYAFR Sbjct: 242 EALEQLVNVGHDFYAFR 258 [20][TOP] >UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RWK9_PHYPA Length = 221 Score = 196 bits (498), Expect = 1e-48 Identities = 103/189 (54%), Positives = 137/189 (72%) Frame = -1 Query: 569 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 390 M+W G L+ V+L+IQG+++EL+DA+KQ+VE+KVG + S LV+EVDVR+S RGG E G Sbjct: 1 MAWGGALAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGG-ETG 59 Query: 389 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 210 RG + +RCEVTL+TK+HGVVRAEE AE+ Y SID VS +I RKLRKIKEK+ HGR K Sbjct: 60 RGGKLQRCEVTLFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPTKS 119 Query: 209 PNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 30 + + EV+ S++ D I +K D +L +E+VRTKYF+M P+ EA++QL Sbjct: 120 RHSPRIGEVL----SDEVVDLDPILGRKPD--DLPDEIVRTKYFEMRPMKPLEALEQLVN 173 Query: 29 VDHDFYAFR 3 V HDFYAFR Sbjct: 174 VGHDFYAFR 182 [21][TOP] >UniRef100_Q10AC8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative, expressed n=1 Tax=Oryza sativa Japonica Group RepID=Q10AC8_ORYSJ Length = 241 Score = 181 bits (459), Expect = 4e-44 Identities = 89/130 (68%), Positives = 110/130 (84%) Frame = -1 Query: 599 TKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 420 ++R A S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR Sbjct: 62 SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121 Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240 LS RGG E RGP+ RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180 Query: 239 ETDHGRHMKG 210 ETD RH+KG Sbjct: 181 ETD-VRHLKG 189 [22][TOP] >UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR Length = 127 Score = 142 bits (359), Expect = 2e-32 Identities = 81/148 (54%), Positives = 99/148 (66%) Frame = -1 Query: 515 MELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 336 M+L+D VK+HVEDKVG+ +QK S+LVREVD RLS R GGE G+GPR R+C RHG Sbjct: 1 MQLTDTVKEHVEDKVGKAVQKFSHLVREVDARLSVR-GGELGKGPRIRKC-------RHG 52 Query: 335 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 156 VVRAEE +ET Y +IDLV SIIQ KLRK+KE E+DHGRHMKG NRLK Sbjct: 53 VVRAEEDSETIYATIDLVLSIIQSKLRKMKE-ESDHGRHMKGLNRLKI------------ 99 Query: 155 EDEIEITPQKDDEEELIEEVVRTKYFDM 72 D+ + +K+D++ L E V Y M Sbjct: 100 RDDADAVSRKEDDDYLDELVSVASYHQM 127 [23][TOP] >UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4 Length = 209 Score = 129 bits (325), Expect = 1e-28 Identities = 82/184 (44%), Positives = 110/184 (59%), Gaps = 4/184 (2%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372 +KL+I G+N+E++DA++ +V+ K+ + L E+DV LS R PR + Sbjct: 1 MKLVIHGKNIEITDAIRDYVQQKIEKAANHFQNLTTEIDVHLSV------ARNPRINPKQ 54 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD-HGRHMKGPNRLK 195 EVT+YT V+RAEE +E Y SIDLVS I R+LRK KE+ D H R + P Sbjct: 55 TAEVTIYTNG-SVIRAEESSENLYASIDLVSDKIARQLRKFKERRQDKHSRSKEEP---- 109 Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15 V +PL ++ D TP EL EEVVRTKYF MPP+T+ EA++QLE+VDHDF Sbjct: 110 --VVSVPLVTDLTGDR---TP------ELPEEVVRTKYFAMPPMTLREALEQLELVDHDF 158 Query: 14 YAFR 3 Y FR Sbjct: 159 YMFR 162 [24][TOP] >UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J8B2_CHLRE Length = 286 Score = 125 bits (313), Expect = 3e-27 Identities = 83/220 (37%), Positives = 117/220 (53%), Gaps = 19/220 (8%) Frame = -1 Query: 605 TTTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVD 426 T R G + S +V++IIQGR + ++DA+K +VE+KV + + S+ ++EVD Sbjct: 49 TRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVD 108 Query: 425 VRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIK 246 V LS RGG G + ++ EVT+YT R+GVVR E+ Y +IDLV I+ KL+KIK Sbjct: 109 VTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQKIK 168 Query: 245 EKETDHGRHMKGPNRLKFSEVILPLPSEDEED------EIEITPQKDDEEELIE------ 102 EK G P R P DEED E+++ Q D+EE ++ Sbjct: 169 EKAISRG---AWPGRAG------PKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQRQFAEL 219 Query: 101 ------EVVRTKYFDM-PPLTVFEAIDQLEMVDHDFYAFR 3 V+R+K + P+TV EAID LE V H FY FR Sbjct: 220 NRIYPANVMRSKTVVLADPITVEEAIDALEAVGHSFYVFR 259 [25][TOP] >UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JS19_SYNJA Length = 191 Score = 124 bits (311), Expect = 6e-27 Identities = 78/183 (42%), Positives = 107/183 (58%), Gaps = 4/183 (2%) Frame = -1 Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRR 369 KL+IQG+N+E++DA++ +V++K+ R ++ + + EVDV LS R PR + Sbjct: 3 KLVIQGKNVEITDAIRSYVQEKIERAVKHFAQITSEVDVNLSV------ARNPRISANQS 56 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKF 192 EVT+Y V+RAEE +E Y SID V+ + RKLRK KE+ H RH K Sbjct: 57 AEVTVYANGT-VIRAEESSENLYASIDRVADKLARKLRKYKERNGVHRIRHSP-----KT 110 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 S + P D + + + EL EVVRTKYF MPP+TV EA+ QLE+VDHDFY Sbjct: 111 SVAVAQQPLTDPLNT-------ERQAELPPEVVRTKYFAMPPMTVQEALHQLELVDHDFY 163 Query: 11 AFR 3 FR Sbjct: 164 VFR 166 [26][TOP] >UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB Length = 190 Score = 124 bits (311), Expect = 6e-27 Identities = 78/183 (42%), Positives = 107/183 (58%), Gaps = 4/183 (2%) Frame = -1 Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRR 369 KL+IQG+N+E++DA++ +V++K+ R + + + EVDV LS R PR ++ Sbjct: 3 KLVIQGKNVEITDAIRSYVQEKIERAVSHFAQITSEVDVNLSV------ARNPRISASQS 56 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKF 192 EVT+Y V+RAEE +E Y SID V+ + RKLRK KE+ H RH K Sbjct: 57 AEVTVYANGT-VIRAEESSENLYASIDRVADKLARKLRKYKERNGIHRVRHTP-----KT 110 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 S + P D + + + EL EVVRTKYF MPP+TV EA+ QLE+VDHDFY Sbjct: 111 SVAVAQQPVTDPLNT-------ERQAELPAEVVRTKYFAMPPMTVQEALHQLELVDHDFY 163 Query: 11 AFR 3 FR Sbjct: 164 VFR 166 [27][TOP] >UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CDL4_ACAM1 Length = 212 Score = 124 bits (310), Expect = 8e-27 Identities = 75/183 (40%), Positives = 111/183 (60%), Gaps = 4/183 (2%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372 +KL+I G+N+E++DA++++V K+ + + L E+DV LS R PR + Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAANHYQNLTTEIDVHLSV------ARNPRITTKQ 54 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 EVTL+ V+RAEE +E Y SIDLV+ I R+LRK KEK R KGPN+ Sbjct: 55 TAEVTLFVNG-SVIRAEESSENLYASIDLVADKIARQLRKYKEK-----RQTKGPNKGSN 108 Query: 191 SEVILPLPSEDEEDEI-EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15 + L + +E+ I ++T +D EL EEVVR KYF + P++V +A++QL++VDHDF Sbjct: 109 RSKAVALQTPEEQPLIGDLT--RDRAPELPEEVVRCKYFAISPMSVHDALEQLDLVDHDF 166 Query: 14 YAF 6 Y F Sbjct: 167 YVF 169 [28][TOP] >UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA Length = 212 Score = 124 bits (310), Expect = 8e-27 Identities = 76/183 (41%), Positives = 107/183 (58%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372 +KL+IQG+N+E++DA+ ++V+ K+ + + L EVDV LS R PR + Sbjct: 1 MKLVIQGKNLEITDAIHEYVQQKIAKAVSHFQQLTNEVDVHLSV------ARNPRINPRQ 54 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 EVT+Y V+RA+E +E Y SIDLV+ I R+LRK KEK R K K Sbjct: 55 TAEVTIYANGT-VIRAQESSENLYASIDLVADKIARQLRKYKEK-----RMAKQYQLPKT 108 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 EV+ P D+ D +L EEVVRTKYF MPP+++ EA++QL+++DHDFY Sbjct: 109 GEVVAQKPIVDDLIG-------DRTVKLPEEVVRTKYFAMPPMSIQEALEQLQLIDHDFY 161 Query: 11 AFR 3 FR Sbjct: 162 MFR 164 [29][TOP] >UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT Length = 213 Score = 123 bits (309), Expect = 1e-26 Identities = 76/182 (41%), Positives = 108/182 (59%), Gaps = 3/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 369 +KL+I G+N+E++DA++++V K+ + + + EVDV LS R PR TR+ Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQ 54 Query: 368 C-EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 EVT+Y V+RAEE +E Y SIDLV+ I R+LRK KE++ D + L Sbjct: 55 AAEVTIYANG-SVIRAEESSENLYASIDLVADKISRQLRKYKERKQD-----QKTQALPT 108 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 +E I+P + + D EL EEVVRTKYF MPP+TV EA++QL++V HDFY Sbjct: 109 TETIVP-------ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFY 161 Query: 11 AF 6 F Sbjct: 162 MF 163 [30][TOP] >UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YIH4_9CYAN Length = 212 Score = 122 bits (307), Expect = 2e-26 Identities = 75/182 (41%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372 +KL++QG+N+E+++A+ ++V K+ + + + L EVDV LS R PR + Sbjct: 1 MKLVVQGKNLEITEAIHEYVHQKITKAVSHYQQLTNEVDVHLS------IARNPRINPKQ 54 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 EVT+Y V+RA+E +E Y SIDLV+ I R+LRK K+K G+H+ P K Sbjct: 55 TAEVTIYANGT-VIRAQESSENLYASIDLVADKIARQLRKFKDKR--QGKHLHPP---KL 108 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 +EV+ P ED I D + EL EVVRTKYF MPP+ + +A++QL++VDHDFY Sbjct: 109 AEVVENQPVI--EDLIG-----DRQPELPPEVVRTKYFAMPPMNLQDALEQLQLVDHDFY 161 Query: 11 AF 6 F Sbjct: 162 VF 163 [31][TOP] >UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YSA5_ANASP Length = 213 Score = 122 bits (305), Expect = 3e-26 Identities = 75/182 (41%), Positives = 107/182 (58%), Gaps = 3/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 369 +KL+I G+N+E++DA++++V K+ + + + EVDV LS R PR TR+ Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQ 54 Query: 368 C-EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 EVT+Y V+RAEE +E Y SIDLV+ I R+LRK KE++ D + Sbjct: 55 AAEVTIYANG-SVIRAEESSENLYASIDLVADKISRQLRKYKERKQDQKTQAQPT----- 108 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 +E I+P + + D EL EEVVRTKYF MPP+TV EA++QL++V HDFY Sbjct: 109 TETIVP-------ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFY 161 Query: 11 AF 6 F Sbjct: 162 MF 163 [32][TOP] >UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VJW0_9CYAN Length = 215 Score = 120 bits (302), Expect = 7e-26 Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372 +KL+IQG+N+E++D+++++V K+ + + + EVDV LS R PR + Sbjct: 1 MKLVIQGKNIEITDSIREYVNQKIEKAVNHFQNMTTEVDVHLSV------ARNPRINTKQ 54 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 EVT+Y + V+RA+E +E Y SIDLV+ IQR+LRK KEK+ K + K Sbjct: 55 TAEVTIYANKT-VIRAQESSEDLYASIDLVADKIQRQLRKYKEKQ-----QKKTQTQPKT 108 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 VI P ED I D EL EVVR KYF MPP+T+ EA +QL++VDHDFY Sbjct: 109 GAVIHEAPVV--EDLIG-----DRTPELPTEVVRMKYFAMPPMTIEEATEQLQLVDHDFY 161 Query: 11 AFR 3 FR Sbjct: 162 MFR 164 [33][TOP] >UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO Length = 284 Score = 120 bits (302), Expect = 7e-26 Identities = 68/185 (36%), Positives = 116/185 (62%), Gaps = 3/185 (1%) Frame = -1 Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHS-YLVREVDVRLSTRGGGEFGR-GPRT 375 +S K+I+QGR++E++D+++++ E+K+ + + + VREVDVR S+RGG + G Sbjct: 78 ASTKVIVQGRHLEITDSIREYAEEKINKAVAHFDQHDVREVDVRCSSRGGADKKTPGGAL 137 Query: 374 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMKGPNRL 198 ++ EVT+YT R+G++R+EE A+ Y SID VS ++RKLRK+KEK+ + +H K + Sbjct: 138 QKTEVTVYT-RNGIIRSEEEADDLYASIDAVSDKLERKLRKVKEKKISKRPKHNKNAPKA 196 Query: 197 KFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 18 + ++ + + DE DE +EVVR K+ + TV+EA +++E + H Sbjct: 197 QTDAIVEEMQAADE--------ALADESMDYDEVVREKFHPVRKCTVYEAAEEMENLGHT 248 Query: 17 FYAFR 3 F+AFR Sbjct: 249 FFAFR 253 [34][TOP] >UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806 RepID=A8YEZ8_MICAE Length = 199 Score = 120 bits (301), Expect = 9e-26 Identities = 73/179 (40%), Positives = 105/179 (58%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +KL+IQG N+ +++A+ +VE K+ + ++ + + +VDV LS R P + E Sbjct: 1 MKLLIQGNNIAVTEAIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHKAE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+Y V+RA+E +E Y SIDLVS I R+LRK KE+ DH H + +K SEV Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTH----STVKTSEV 112 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + P +D D EL EVVR KYF MPP+T+ EA+ QL++VDHDF+ F Sbjct: 113 VQEKPLDDNLIG-------DRTPELPAEVVRMKYFAMPPMTIEEALTQLQLVDHDFFMF 164 [35][TOP] >UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DKM6_THEEB Length = 209 Score = 119 bits (298), Expect = 2e-25 Identities = 73/180 (40%), Positives = 104/180 (57%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 ++L+I G+N++++D ++ ++ K+ R ++ EVDV LS P+ + E Sbjct: 1 MRLVIHGKNIDITDGIRSYLNQKIERATSHFQNVINEVDVHLSVARNRS--TAPK-QTAE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT++ V+RAEE +E Y SIDLV+ I RKLRK+KEK D R K N + EV Sbjct: 58 VTVFVNG-SVIRAEESSENLYASIDLVADKIARKLRKLKEKRQDKSR-AKDTNSVVEPEV 115 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 + L + TPQ L E+VVR KYF MPP+T+ EA++ LEMVDHDFY FR Sbjct: 116 VTDLVGDR-------TPQ------LPEQVVRMKYFAMPPMTIQEALEHLEMVDHDFYVFR 162 [36][TOP] >UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IVM1_NOSP7 Length = 214 Score = 119 bits (297), Expect = 2e-25 Identities = 75/183 (40%), Positives = 106/183 (57%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 369 +KL+I +N+E++DA++++V K+ + + EVDV LS R PR TR+ Sbjct: 1 MKLVIHSKNIEITDAIREYVHQKIEKAASHFQSITNEVDVHLSV------ARNPRINTRQ 54 Query: 368 C-EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 EVT+Y V+RAEE +E Y SIDLV+ I R+LRK KE+ D + P + Sbjct: 55 AAEVTIYANG-SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDQ-KTQSQPTEVVV 112 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 +E ++P D TP EL EVVRTKYF MPP+T+ EA++QL++V HDFY Sbjct: 113 AESVVPDLIGDR------TP------ELPNEVVRTKYFSMPPMTLAEALEQLQLVGHDFY 160 Query: 11 AFR 3 FR Sbjct: 161 MFR 163 [37][TOP] >UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2 Tax=Cyanothece RepID=C7QW97_CYAP0 Length = 205 Score = 119 bits (297), Expect = 2e-25 Identities = 73/186 (39%), Positives = 107/186 (57%) Frame = -1 Query: 560 DGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGP 381 D + S+KL+IQG N+++++++ +V++K+ + ++ + +VDV LS R Sbjct: 2 DNGVLSMKLLIQGNNIDVTESIHDYVQEKLEKAVKHFQSITTKVDVHLSVARNA---RIT 58 Query: 380 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 201 + EVT+Y V+RA+E +E+ Y SIDLVS I R+LRK KEK + K PN Sbjct: 59 NKHKAEVTVYANGT-VIRAQEGSESLYASIDLVSDKIARQLRKYKEKLNNK----KAPNP 113 Query: 200 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 21 +K EV E + D EL EV+R KYF MPP+T+ EA+ QLE+VDH Sbjct: 114 VKVGEVTTATAIEGDLIG-------DRTPELPAEVIRMKYFAMPPMTIDEALHQLELVDH 166 Query: 20 DFYAFR 3 DFY FR Sbjct: 167 DFYMFR 172 [38][TOP] >UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc azollae' 0708 RepID=B9YPU1_ANAAZ Length = 214 Score = 118 bits (296), Expect = 3e-25 Identities = 74/183 (40%), Positives = 102/183 (55%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372 +KL+I G+N+E++DA++++V K+ R + + EV+V LS R PR + Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIERAVNHFQSITNEVNVHLSV------ARNPRISTKQ 54 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 EVT+Y V+RAEE +E Y SIDLV+ I R+LRK KE+ DH N Sbjct: 55 AAEVTIYANG-SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDHKTQPIPTNEAVV 113 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 +E + D TP EL EVVRTKYF MPP+T+ EA +QL++V HDFY Sbjct: 114 AEPVADSLIGDR------TP------ELPGEVVRTKYFPMPPMTLAEAQEQLQLVGHDFY 161 Query: 11 AFR 3 FR Sbjct: 162 MFR 164 [39][TOP] >UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP Length = 213 Score = 117 bits (294), Expect = 6e-25 Identities = 72/182 (39%), Positives = 103/182 (56%), Gaps = 3/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372 +KL+I G+N+E++DA++++V K+ + + + EVDV LS R PR + Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVSHFQNITNEVDVHLSV------ARNPRITTKQ 54 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 EVT++ V+RAEE +E Y SIDLV+ I R+LRK KE+ D + N Sbjct: 55 AAEVTIFANG-SVIRAEESSENLYASIDLVADKIARQLRKYKERLQDQKTNAPPTN---- 109 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 +V++P P + D EL EVVRTKYF MPP+TV EA +QL++V HDFY Sbjct: 110 -QVLVPEP-------VAADLIGDRTPELPNEVVRTKYFSMPPMTVAEATEQLQLVGHDFY 161 Query: 11 AF 6 F Sbjct: 162 MF 163 [40][TOP] >UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7 Length = 199 Score = 117 bits (293), Expect = 7e-25 Identities = 69/180 (38%), Positives = 108/180 (60%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +KL+IQG N+ +++A+ +V+ K+ + ++ L +VDV LS + R + E Sbjct: 1 MKLLIQGNNITVTEAIHDYVQQKLEKAVKHFQTLTTKVDVHLSV---AKNARIQNKHKAE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+Y V+RA+E +E Y SIDLVS I R+LRK KE++ + H + +K EV Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERKLEQNAH----SPVKAGEV 112 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 + +++ IE D + EL EVVR KYF MPP+++ EA++QL++VDHDF+ FR Sbjct: 113 V-------QQETIEENLIGDRQPELPPEVVRMKYFGMPPMSIDEALEQLQLVDHDFFMFR 165 [41][TOP] >UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WZE1_CYAA5 Length = 201 Score = 117 bits (293), Expect = 7e-25 Identities = 74/181 (40%), Positives = 106/181 (58%) Frame = -1 Query: 545 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 366 S+KL+IQG N+++++++ +V K+ + ++ + L +VDV LS + R + Sbjct: 2 SMKLLIQGNNIDVTESINDYVTQKLEKAVKHYQTLTTKVDVHLSV---AKNARITNKHKA 58 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 EVT+Y V+RA+E +E Y SIDLVS I R+LRK KEK +H K + +K E Sbjct: 59 EVTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNH----KPQSSVKNPE 113 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 V+ E EIE D E L EV+R KYF MPP+++ EA QLE+VDHDFY F Sbjct: 114 VL-------PEREIEKDLIGDREAALPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYMF 166 Query: 5 R 3 R Sbjct: 167 R 167 [42][TOP] >UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI Length = 215 Score = 117 bits (292), Expect = 9e-25 Identities = 71/182 (39%), Positives = 102/182 (56%), Gaps = 3/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372 +KL+IQG+N+E++D++ ++V K+ + + L EVDV LS R PR + Sbjct: 1 MKLVIQGKNIEITDSIHEYVNQKIEKAVNHFQQLTTEVDVHLSV------ARNPRINPKQ 54 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 EVT+Y V+RA+E +E Y SIDLV+ I R+LRK KEK K + ++ Sbjct: 55 TAEVTIYANGT-VIRAQESSENLYASIDLVADKIARQLRKYKEKRQSKVNKTKTVDLIES 113 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 V+ L D + EL EVVRTKYF MP +TV EA++QL+++DHDFY Sbjct: 114 QPVVENLIG-------------DRQAELPSEVVRTKYFPMPSMTVEEALEQLQLIDHDFY 160 Query: 11 AF 6 F Sbjct: 161 MF 162 [43][TOP] >UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa NIES-843 RepID=B0JSS1_MICAN Length = 199 Score = 117 bits (292), Expect = 9e-25 Identities = 72/179 (40%), Positives = 105/179 (58%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +KL+IQG N+ +++ + +VE K+ + ++ + + +VDV LS R P R E Sbjct: 1 MKLLIQGNNIAVTEPIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHRAE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+Y V+RA+E +E Y SIDLVS I R+LRK KE+ DH + +K SEV Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTNAP----VKTSEV 112 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + +E ++ + D EL EVVR KYF MPP+T+ EA+ QL++VDHDFY F Sbjct: 113 V-------QEKPLDGSLIGDRTPELPAEVVRMKYFAMPPMTIEEALTQLQLVDHDFYMF 164 [44][TOP] >UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC 6803 RepID=LRTA_SYNY3 Length = 191 Score = 116 bits (290), Expect = 2e-24 Identities = 71/180 (39%), Positives = 104/180 (57%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +KL+IQG N+ +++A+ +VE+KV R ++ L +VDV LS R + E Sbjct: 1 MKLLIQGNNITVTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSVARNA---RITNKHKAE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+Y V+RA+E +E Y SIDLV+ I R+LRK KE+ D K +K SE+ Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVADKIARQLRKYKERIQD-----KQHGNVKTSEI 111 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 + E+ +E D EL EV+R KYF MPP+ + +A++QL++VDHDFY FR Sbjct: 112 V-------EDKPVEENLIGDRAPELPSEVLRMKYFAMPPMAIEDALEQLQLVDHDFYMFR 164 [45][TOP] >UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307 RepID=A5GUZ2_SYNR3 Length = 187 Score = 114 bits (284), Expect = 8e-24 Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 7/187 (3%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +KL+I GRN+E++ A++ + E K+ R + + +V+E DV LS R PR + Sbjct: 1 MKLLIHGRNLEVTPALRDYTETKLSRAVSHFNGMVQEADVHLSV------ARNPRVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVTL+ V+RA+E ++ Y SIDLV+ + R+L++ K++ HG H Sbjct: 55 AEVTLFASGT-VIRAQERSQNLYASIDLVAGKLARQLQRHKDRRQGHGHH---------- 103 Query: 188 EVILPLPSEDEEDEIEITPQKDD-----EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVD 24 D + E E+ P + D EL VVR KYF MPP++V EAI QLE++D Sbjct: 104 --------SDLQAEPEVMPLQGDMLQGRHAELPAPVVRRKYFAMPPMSVEEAIHQLEVID 155 Query: 23 HDFYAFR 3 HDFY FR Sbjct: 156 HDFYVFR 162 [46][TOP] >UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO Length = 199 Score = 113 bits (282), Expect = 1e-23 Identities = 67/180 (37%), Positives = 107/180 (59%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +KL+IQG N+ +++A+ +V++K+ + ++ + +VDV LS + GR + E Sbjct: 1 MKLLIQGNNITVTEAIHDYVQEKLEKAVKHFQAITTKVDVHLSV---AKNGRVQNKHKAE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+Y V+RA+E +E Y SIDLVS I R+LRK KE+ + K + +K +V Sbjct: 58 VTVYANG-AVIRAQEGSENLYASIDLVSDKIARQLRKYKERRLEQ----KAYSPVKTGDV 112 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 + ++ +E D + EL EVVR KYF MP +++ EA++QL++VDHDFY FR Sbjct: 113 V-------QDQPVEGNLIGDRQPELPPEVVRMKYFAMPLMSIEEALEQLQLVDHDFYMFR 165 [47][TOP] >UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IRI7_9CHRO Length = 199 Score = 113 bits (282), Expect = 1e-23 Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 2/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +KL+IQG N+++++++ +V K+ + ++ + +VDV LS + R + E Sbjct: 1 MKLLIQGNNIDVTESINDYVTQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH--MKGPNRLKFS 189 VT+Y V+RA+E +E Y SIDLVS I R+LRK KEK +H +K P+ L + Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNHKPQSSVKSPDVLPET 116 Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9 EV +ED I D E EL EV+R KYF MPP+++ EA QLE+VDHDFY Sbjct: 117 EV--------KEDLIG-----DREVELPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYM 163 Query: 8 FR 3 FR Sbjct: 164 FR 165 [48][TOP] >UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE Length = 224 Score = 112 bits (281), Expect = 2e-23 Identities = 68/181 (37%), Positives = 107/181 (59%), Gaps = 1/181 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +KL+IQG+N+E++DA++ HV K+ + L+ +VDV LS + P+ + E Sbjct: 1 MKLVIQGKNIEITDAIRSHVHQKIEKATAHFQTLINKVDVCLSVQNNPRIA--PK-QTAE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT++ + VVRAEE +E+ Y SID+V+ + R+LRK KEK D P ++V Sbjct: 58 VTVFLN-NVVVRAEESSESLYASIDMVTDKLTRQLRKYKEKRRDQDHATVRP-----TDV 111 Query: 182 ILPLPSED-EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + + D +I+ + + +L + VVR+KYF MPP+TV A++ LE+V HDFY F Sbjct: 112 DATINAPDITSHNADISEVLNHQPKLPDTVVRSKYFAMPPMTVQTALENLELVGHDFYMF 171 Query: 5 R 3 R Sbjct: 172 R 172 [49][TOP] >UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT Length = 199 Score = 112 bits (280), Expect = 2e-23 Identities = 69/180 (38%), Positives = 107/180 (59%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +KL+IQG N+++++++ +V+ K+ + ++ + +VDV LS + R + E Sbjct: 1 MKLLIQGNNIDVTESINDYVKQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+Y V+RA+E +E Y SIDLVS I R+LRK KEK ++H K + K EV Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKISRQLRKYKEKVSNH----KPQSSAKLPEV 112 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 LP ++ +++ D + EL EV+R KYF MP +++ EA QLE+VDHDFY FR Sbjct: 113 ---LPEKEVSEDLI----GDRQAELPPEVIRMKYFAMPSMSIEEAKHQLELVDHDFYMFR 165 [50][TOP] >UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803 RepID=A5GJ89_SYNPW Length = 195 Score = 112 bits (279), Expect = 3e-23 Identities = 71/183 (38%), Positives = 106/183 (57%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +KL+I GRN++++ A++ + E K+ R I LV+E DV LS R PR + Sbjct: 1 MKLLIHGRNLDVTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ V+RA+E +E Y SIDLV+S + R+LR+ K++ +DH H G + S Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRFKDRHSDH-HHSHGH---RAS 109 Query: 188 EVILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 E P +DE + D +E +L VR KYF MPP+T+ +A QL+++DHDFY Sbjct: 110 ET--PTTESVLDDEAIVESLLDGKEVQLPSPGVRRKYFSMPPMTLEQARQQLDLIDHDFY 167 Query: 11 AFR 3 FR Sbjct: 168 LFR 170 [51][TOP] >UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IMZ9_9CHRO Length = 195 Score = 112 bits (279), Expect = 3e-23 Identities = 72/186 (38%), Positives = 103/186 (55%), Gaps = 6/186 (3%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 369 +KL+I GRN+E++ A++++ E K+ R I +V+E DV LS R PR + Sbjct: 1 MKLLIHGRNLEVTPAIREYTETKLTRAITHFEGMVKEADVHLSV------ARNPRVPQQI 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ V+RA+EH++ Y SIDLV+S + R+L + KE+ H RH +R Sbjct: 55 AEVTMFANGT-VIRAQEHSDNLYASIDLVASKLTRQLNRYKERV--HERHQGPVHRSARD 111 Query: 188 E----VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 21 E LP P D E EL VR KYF MPP+++ EA+ QLE++DH Sbjct: 112 EEAGAASLPPPGSSLTD--------GKEPELPSRGVRRKYFAMPPMSLDEALHQLELIDH 163 Query: 20 DFYAFR 3 DFY FR Sbjct: 164 DFYVFR 169 [52][TOP] >UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002 RepID=LRTA_SYNP2 Length = 193 Score = 112 bits (279), Expect = 3e-23 Identities = 71/179 (39%), Positives = 100/179 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +KL+IQG N+ +++++ +VE K+ + + +VDV LS R + E Sbjct: 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNA---RITDKHKAE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+Y V+RA+E +E Y SIDLVS I R+LRK KEK H++ K SEV Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQE----KTSEV 112 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + ED + D EL EVVR KYF MPP+T+ EA++QL++VDHDFY F Sbjct: 113 L-------PEDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMF 164 [53][TOP] >UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp. CC9311 RepID=Q0ICJ8_SYNS3 Length = 191 Score = 111 bits (278), Expect = 4e-23 Identities = 71/182 (39%), Positives = 104/182 (57%), Gaps = 2/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +KL+I GRN++++ A++++ E K+ R I LV+E DV LS R PR + Sbjct: 1 MKLLIHGRNLDVTPALREYTETKLERAIHHFDDLVKEADVHLSV------ARNPRVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DHG H P Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRFKERHSDHG-HRTTPTAAN-D 111 Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9 ++ P+ED E E +L VR KYF MP +++ EA QLE++DHDFY Sbjct: 112 VLLTERPTEDSLLE-------GKEAQLPSPGVRRKYFAMPAMSLEEARHQLELIDHDFYL 164 Query: 8 FR 3 FR Sbjct: 165 FR 166 [54][TOP] >UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916 RepID=Q05SE1_9SYNE Length = 195 Score = 110 bits (275), Expect = 9e-23 Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +KL+I GRN+E++ A++++ E K+ R +Q + +V E DV LS R PR + Sbjct: 1 MKLLIHGRNLEVTAALREYTESKLERAVQHYDEMVVEADVHLSV------ARNPRVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKF 192 EVT++ V+RA+E +E Y SIDLV++ + R+LR+ KE+ +DH H + Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVANKLSRQLRRYKERHSDHHHSHGHRASTTPT 113 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 +E +L ++ ++ + E L + VR KYF MPP++V EA QL+++DHDF+ Sbjct: 114 TEAVL------DDSAVDGSLLDGKEAHLPDPGVRRKYFPMPPMSVEEARHQLDLIDHDFF 167 Query: 11 AFR 3 FR Sbjct: 168 LFR 170 [55][TOP] >UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805 RepID=A4CWK2_SYNPV Length = 195 Score = 110 bits (275), Expect = 9e-23 Identities = 71/183 (38%), Positives = 106/183 (57%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +KL+I GRN++++ A++ + E K+ R I LV+E DV LS R PR + Sbjct: 1 MKLLIHGRNLDVTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ V+RA+E +E Y SIDLV+S + R+LR+ K++ +DH H G K S Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRYKDRHSDH-HHSHGH---KAS 109 Query: 188 EVILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 E P ++E + D +E +L VR KYF MPP+T+ +A QL+++DHDFY Sbjct: 110 ET--PTTEAVLDNEAVVESLLDGKEVQLPSPGVRRKYFAMPPMTLEQARQQLDLIDHDFY 167 Query: 11 AFR 3 FR Sbjct: 168 VFR 170 [56][TOP] >UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. RS9917 RepID=A3ZA02_9SYNE Length = 195 Score = 109 bits (273), Expect = 2e-22 Identities = 68/182 (37%), Positives = 106/182 (58%), Gaps = 2/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +KL+I GRN+EL+ A++ + + K+ R +Q +V+E DV LS R PR + Sbjct: 1 MKLLIHGRNLELTPALRDYTQSKLERAVQHFDDMVKEADVHLSV------ARNPRVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H +R + Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRFKERHSDH--HHSNGHRASET 111 Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9 P + + I+ + E +L + VR KYF MPP+++ EA QL+++DHDFY Sbjct: 112 P---PTDAIADAAPIDGSLLDGKEVQLPDPGVRRKYFAMPPMSLEEARHQLDVIDHDFYL 168 Query: 8 FR 3 FR Sbjct: 169 FR 170 [57][TOP] >UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1 Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9 Length = 195 Score = 108 bits (270), Expect = 3e-22 Identities = 69/183 (37%), Positives = 101/183 (55%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +K++I GRN+E++ A++++ K+ R +RE DV LS R PR + Sbjct: 1 MKVLIHGRNLEITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ V+RA+E +E Y SIDLV + R+LRK KE+ DH H G S Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHG-----HS 107 Query: 188 EVILPLPSE-DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 + P E +E +E + E +L E VR KYF MPP+T+ +A QL+++DHDFY Sbjct: 108 ASLTPSTEEVSDESAVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFY 167 Query: 11 AFR 3 FR Sbjct: 168 LFR 170 [58][TOP] >UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. MIT 9303 RepID=A2CBL6_PROM3 Length = 195 Score = 108 bits (269), Expect = 4e-22 Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 4/184 (2%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +KL+I GRN+EL+ A++++ + K+ R IQ +V+E DV LS R P + Sbjct: 1 MKLLIHGRNLELTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLK 195 EVT++ V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H G + Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTP 112 Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15 +E ++ +E I+ + E L VR KYF MPP++V +A QL+++DHDF Sbjct: 113 TTEAVI------DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARHQLDLIDHDF 166 Query: 14 YAFR 3 Y FR Sbjct: 167 YLFR 170 [59][TOP] >UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N7A9_9CHLO Length = 245 Score = 108 bits (269), Expect = 4e-22 Identities = 72/198 (36%), Positives = 110/198 (55%), Gaps = 5/198 (2%) Frame = -1 Query: 581 ASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHS-YLVREVDVRLSTRG 405 AS + + P K+I+QGR++E+++A++ + E K+ + + + VREVDV S R Sbjct: 33 ASGARAMAAPAKGTKVIVQGRHLEITEAIRDYCEQKINKAVSHFDMHDVREVDVTCSARS 92 Query: 404 GGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH- 228 E +G + +VT+YT R+GVVR+EE A+ Y SID VS I+RKLRKIKEK+ Sbjct: 93 --EKQQGGDLQMTQVTVYT-RNGVVRSEEEADNLYASIDAVSDKIERKLRKIKEKKNSKK 149 Query: 227 -GRHMKGPNRLKFSEVILPLPSEDE--EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTV 57 G+ P + + ++++ DE DEIE EE V KY + T Sbjct: 150 AGKTKANP-KAQTADIVAAAAEADEARADEIE-----------FEETVGVKYMAVKTSTA 197 Query: 56 FEAIDQLEMVDHDFYAFR 3 EA +++E + H FYAF+ Sbjct: 198 MEAAEEMESLGHVFYAFK 215 [60][TOP] >UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus str. MIT 9313 RepID=Q7V8W0_PROMM Length = 195 Score = 107 bits (267), Expect = 8e-22 Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 4/184 (2%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +KL+I GRN+EL+ A++++ + K+ R IQ +V+E DV LS R P + Sbjct: 1 MKLLIHGRNLELTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLK 195 EVT++ V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H G + Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTP 112 Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15 +E ++ +E I+ + E L VR KYF MPP++V +A QL+++DHDF Sbjct: 113 TTEAVI------DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARYQLDLIDHDF 166 Query: 14 YAFR 3 Y FR Sbjct: 167 YLFR 170 [61][TOP] >UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE Length = 195 Score = 107 bits (266), Expect = 1e-21 Identities = 68/183 (37%), Positives = 101/183 (55%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +K++I GRN+E++ A++++ K+ R +RE DV LS R PR + Sbjct: 1 MKVLIHGRNLEITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ V+RA+E +E Y SIDLV + R+LRK KE+ DH H G S Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHG-----HS 107 Query: 188 EVILPLPSE-DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 + P E +E +E + E +L E VR KYF MPP+T+ +A QL+++DHDFY Sbjct: 108 ASLTPSTEEVSDESVVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFY 167 Query: 11 AFR 3 F+ Sbjct: 168 LFK 170 [62][TOP] >UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102 RepID=Q7U8F3_SYNPX Length = 195 Score = 106 bits (265), Expect = 1e-21 Identities = 65/183 (35%), Positives = 104/183 (56%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +KL+I GRN+E++ A++ + + K+ R VRE DV LS R PR + Sbjct: 1 MKLLIHGRNLEITPALRDYTQTKLERATHHFGNAVREADVHLSV------ARNPRVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKF 192 EVT++ V+RA+E +E Y SIDL +S + R+LR+ KE+ +DH H + Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLAASKLARQLRRWKERHSDHHHSHGHSASTTPA 113 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 +E + ++ +++ + + E EL + VR KYF MPP+++ EA QL+++DHDFY Sbjct: 114 TEAVT------DDSQVDGSLLQGREAELPDPGVRRKYFAMPPMSLEEARRQLDLIDHDFY 167 Query: 11 AFR 3 FR Sbjct: 168 LFR 170 [63][TOP] >UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. AS9601 RepID=A2BPM8_PROMS Length = 194 Score = 106 bits (265), Expect = 1e-21 Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 4/184 (2%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR + Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLK 195 EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL- 112 Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15 P+ S + + ++ E L E ++ KYF+M P++ EA QL+++DHDF Sbjct: 113 ------PIESMESNFLDKALFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDF 166 Query: 14 YAFR 3 Y FR Sbjct: 167 YVFR 170 [64][TOP] >UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. MIT 9301 RepID=A3PBB8_PROM0 Length = 194 Score = 106 bits (264), Expect = 2e-21 Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 4/184 (2%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR + Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLK 195 EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL- 112 Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15 P+ S + + ++ E L E ++ KYF+M P++ EA QL+++DHDF Sbjct: 113 ------PIESMESNFLDKAFFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDF 166 Query: 14 YAFR 3 Y FR Sbjct: 167 YVFR 170 [65][TOP] >UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus marinus clone HF10-88F10 RepID=Q1PJW9_PROMA Length = 194 Score = 105 bits (263), Expect = 2e-21 Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 6/186 (3%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR + Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLK 195 EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H K N+ Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNNQFK--NKES 111 Query: 194 FSEVILPLPSEDEEDEI--EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 21 F PSE+ E E + E L E ++ KYF+M P++ EA QL+++DH Sbjct: 112 F-------PSENTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDH 164 Query: 20 DFYAFR 3 DFY FR Sbjct: 165 DFYVFR 170 [66][TOP] >UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7 Length = 207 Score = 105 bits (262), Expect = 3e-21 Identities = 67/181 (37%), Positives = 105/181 (58%), Gaps = 1/181 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +KL++QG N++++ A+ +V+ K+ + + + + E+DV LS + + + E Sbjct: 1 MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+Y V+RAEE E Y SIDLVS I R+L+K KEK D KG +L +E Sbjct: 58 VTIYANGT-VIRAEECNENLYASIDLVSDKITRQLKKYKEKLRDR----KG--QLSTAET 110 Query: 182 ILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ++ D +T + + EL +++VRTKYF MP +TV +A+ QL++VDHDFY F Sbjct: 111 -----ADQLSDGALVTDLLNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMF 165 Query: 5 R 3 R Sbjct: 166 R 166 [67][TOP] >UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC Length = 195 Score = 105 bits (261), Expect = 4e-21 Identities = 65/183 (35%), Positives = 102/183 (55%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +KL+I GRN+E++ A++ + + K+ R VRE DV LS R PR + Sbjct: 1 MKLLIHGRNLEITPALRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKF 192 EVT++ V+RA+E +E Y SIDL + + R+LR+ KE+ +DH H + Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPS 113 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 ++V+ ++ +E + + E EL + VR KYF MPP+ + EA QL+++DHDFY Sbjct: 114 TDVV------NDASPVEASLLQGREAELPDPGVRRKYFAMPPMGLEEARRQLDLIDHDFY 167 Query: 11 AFR 3 FR Sbjct: 168 LFR 170 [68][TOP] >UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. NATL1A RepID=A2C0K6_PROM1 Length = 194 Score = 104 bits (260), Expect = 5e-21 Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 2/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +KL+I GRN+EL+ +++ + + K+ + +V+E DV LS R PR + Sbjct: 1 MKLLIHGRNLELTPSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ V+RA+E +E Y SIDLV++ + R+LRK KE+ H H + + Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHNNQSTKSVQN 113 Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9 E I S D + + E L VR KYF+M P+T+ +A QL+++DHDFY Sbjct: 114 EKIENFSSSDH------SLIEGKEPHLPNPGVRRKYFEMDPMTIEQARVQLDLIDHDFYL 167 Query: 8 FR 3 FR Sbjct: 168 FR 169 [69][TOP] >UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YVD7_9SYNE Length = 195 Score = 104 bits (260), Expect = 5e-21 Identities = 65/186 (34%), Positives = 104/186 (55%), Gaps = 6/186 (3%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 369 +KL+I GRN++++ A++ + E K+GR I + LV+E DV LS R PR + Sbjct: 1 MKLLIHGRNLDVTPAIRDYTEAKLGRAINHYEGLVKEADVHLSV------ARNPRVAQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ V+RA+E +E Y SID+V+ + R+LR+ K++ ++H N Sbjct: 55 AEVTVFANGV-VIRAQERSENLYASIDMVAGKLSRQLRRYKDRLSNHHGAGSPAN----- 108 Query: 188 EVILPLPSEDEEDEIE-ITPQK---DDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 21 + + E+ +E + P D E L VR KYF MP +++ +A+ QLE++DH Sbjct: 109 -----VGDDTEQPSLEGVLPNDLIGDREPALPVPAVRRKYFSMPAMSLDQALHQLELIDH 163 Query: 20 DFYAFR 3 DFY FR Sbjct: 164 DFYVFR 169 [70][TOP] >UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus PCC 6301 RepID=Q5N179_SYNP6 Length = 207 Score = 103 bits (258), Expect = 8e-21 Identities = 66/181 (36%), Positives = 105/181 (58%), Gaps = 1/181 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +KL++QG N++++ A+ +V+ K+ + + + + E+DV LS + + + E Sbjct: 1 MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+Y V+RAEE E Y SIDLVS I R+L+K KE+ D KG +L +E Sbjct: 58 VTIYANGT-VIRAEECNENLYASIDLVSDKITRQLKKYKEELRDR----KG--QLSTAET 110 Query: 182 ILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ++ D +T + + EL +++VRTKYF MP +TV +A+ QL++VDHDFY F Sbjct: 111 -----ADQLSDGALVTDLLNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMF 165 Query: 5 R 3 R Sbjct: 166 R 166 [71][TOP] >UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. MIT 9515 RepID=A2BV60_PROM5 Length = 194 Score = 103 bits (257), Expect = 1e-20 Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR + Sbjct: 1 MKILIHGKNIELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRLSYQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ ++RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F+ Sbjct: 55 AEVTIFASGT-IIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHYKNLNYNLEKNKHSFT 113 Query: 188 EVILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 + + D I+ D E +L E ++ KYF+M P+++ EA QL+++DHDFY Sbjct: 114 N------TNEHLDSIDKNIFNDKREAKLPEPSIKNKYFEMIPISLEEARKQLDLIDHDFY 167 Query: 11 AFR 3 FR Sbjct: 168 VFR 170 [72][TOP] >UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP Length = 194 Score = 103 bits (256), Expect = 1e-20 Identities = 63/183 (34%), Positives = 102/183 (55%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +K++I G+N+EL+ +K++ E K+ + + +V+E D+ LS + PR + Sbjct: 1 MKILIHGKNLELTGPLKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ ++RAEE E Y SIDLVS+ + RKLRK KE+ + N+ +S Sbjct: 55 AEVTIFANGT-IIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHNKKLHNNLVKNKNSYS 113 Query: 188 EVILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 I +E D I+ ++ E L E ++ KYF+M P+++ EA QL+ +DHDFY Sbjct: 114 NAI------EESDSIDKDIFNEEREVRLPEPSIKKKYFEMIPISLEEARKQLDFIDHDFY 167 Query: 11 AFR 3 FR Sbjct: 168 LFR 170 [73][TOP] >UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str. MIT 9215 RepID=A8G3B2_PROM2 Length = 194 Score = 103 bits (256), Expect = 1e-20 Identities = 65/183 (35%), Positives = 103/183 (56%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR + Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF- 112 Query: 188 EVILPLPSEDEEDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 L ++ E ++ KD E L E ++ KYF+M P++ EA QL+++DHDFY Sbjct: 113 -----LIADTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFY 167 Query: 11 AFR 3 FR Sbjct: 168 VFR 170 [74][TOP] >UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured Prochlorococcus marinus clone ASNC2259 RepID=Q1PKX8_PROMA Length = 194 Score = 103 bits (256), Expect = 1e-20 Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 4/184 (2%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR + Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLK 195 EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL- 112 Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15 P+ S + + + E L + ++ KYF+M P++ EA QL+++DHDF Sbjct: 113 ------PIESMESNFLDKAFFIEGTEASLPKPSIKNKYFEMTPISSDEARKQLDLIDHDF 166 Query: 14 YAFR 3 Y FR Sbjct: 167 YVFR 170 [75][TOP] >UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT 9202 RepID=B9P0E9_PROMA Length = 194 Score = 103 bits (256), Expect = 1e-20 Identities = 63/182 (34%), Positives = 100/182 (54%), Gaps = 2/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR + Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF- 112 Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9 P+ + E + E L E ++ KYF+M P++ EA QL+++DHDFY Sbjct: 113 ----PIADTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYV 168 Query: 8 FR 3 FR Sbjct: 169 FR 170 [76][TOP] >UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Prochlorococcus marinus str. NATL2A RepID=Q46H11_PROMT Length = 194 Score = 102 bits (255), Expect = 2e-20 Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 2/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +KL+I GRN+EL+ +++ + + K+ + +V+E DV LS R PR + Sbjct: 1 MKLLIHGRNLELTQSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ V+RA+E +E Y SIDLV++ + R+LRK KE+ H H + + Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHHNQSTKSVQN 113 Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9 E S D +T K E L VR KYF+M P+ + +A QL+++DHDFY Sbjct: 114 EDTQNFSSSDH----SLTEGK--EPHLPSPGVRRKYFEMTPMNIEQARVQLDLIDHDFYL 167 Query: 8 FR 3 FR Sbjct: 168 FR 169 [77][TOP] >UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109 RepID=D0CH01_9SYNE Length = 195 Score = 102 bits (254), Expect = 2e-20 Identities = 63/183 (34%), Positives = 102/183 (55%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +KL+I GRN+E++ +++ + + K+ R VRE DV LS R PR + Sbjct: 1 MKLLIHGRNLEITPSLRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKF 192 EVT++ V+RA+E +E Y SIDL + + R+LR+ KE+ +DH H + Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPS 113 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 ++V+ ++ +E + + E EL + VR KYF MPP+ + +A QL+++DHDFY Sbjct: 114 TDVV------NDASPVESSLLQGREAELPDPGVRRKYFAMPPMGLEDARRQLDLIDHDFY 167 Query: 11 AFR 3 FR Sbjct: 168 LFR 170 [78][TOP] >UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus RepID=Q7VDH9_PROMA Length = 195 Score = 101 bits (251), Expect = 5e-20 Identities = 64/183 (34%), Positives = 105/183 (57%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369 +K++I GRN+EL+ A++++ + K+ + I +V+E DV LS + PR + Sbjct: 1 MKVLIHGRNLELTPALREYTKSKLEKAIHHFGDMVKEADVHLSV------AKNPRVPQQT 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ V+RA+E ++ Y SIDLVS+ + R+LR+ KE+ +DH H G Sbjct: 55 AEVTVFANGT-VIRAQERSQNLYASIDLVSNKLCRQLRRYKERHSDH-HHSPG-----HR 107 Query: 188 EVILPLPSEDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 I P E ED+ I + + E +L + +R KYF M P+ + +A QL+++DHDFY Sbjct: 108 ASITPTTEEVLEDKSINGSLVEGKEAKLPKPGIRRKYFPMHPMNIEQAQHQLDLIDHDFY 167 Query: 11 AFR 3 F+ Sbjct: 168 LFK 170 [79][TOP] >UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1 Tax=Prochlorococcus marinus str. MIT 9312 RepID=Q31CD8_PROM9 Length = 194 Score = 100 bits (250), Expect = 7e-20 Identities = 62/180 (34%), Positives = 98/180 (54%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K++I G+N+EL+ A+K++ + K+ + + +V+E D+ LS E + E Sbjct: 1 MKILIHGKNLELTGALKEYTQAKIEKATHHYKDIVKEADIHLSI----EKNPSVSLQTAE 56 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ + N F Sbjct: 57 VTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNYKTNYINQFKNNESF--- 112 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 P+ S D + ++ E L E ++ KYF+M P++ EA QL+++DHDFY FR Sbjct: 113 --PIESADSNVLDKTLFKQGREASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFR 170 [80][TOP] >UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=A9BE19_PROM4 Length = 197 Score = 100 bits (250), Expect = 7e-20 Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 369 +KL+I GRN+EL+ +++++ + K+ + I +V+E DV LS + P + Sbjct: 1 MKLLIHGRNLELTPSLREYTQSKLEKAIHHFDGIVQEADVHLS------IAKNPSVPQQI 54 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EVT++ V+RA+E ++ Y SIDLV++ + R+LRK KE+ +DH H G S Sbjct: 55 AEVTVFANGT-VIRAQERSQNLYASIDLVATKLCRQLRKYKERHSDH-HHSHG-----HS 107 Query: 188 EVILPLPSEDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 + P ED+ I+ + + E L +R KYF MPP++ +A QL+++DHDFY Sbjct: 108 ASLTPTTEAVVEDKAIDSSLIQGKEAHLPTPGIRRKYFSMPPMSTEQARHQLDLIDHDFY 167 Query: 11 AFR 3 F+ Sbjct: 168 MFK 170 [81][TOP] >UniRef100_Q5MCR1 Chloroplast-specific ribosome-associated protein n=1 Tax=Volvox carteri f. nagariensis RepID=Q5MCR1_VOLCA Length = 232 Score = 98.2 bits (243), Expect = 5e-19 Identities = 46/109 (42%), Positives = 75/109 (68%) Frame = -1 Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR 369 S+V++IIQGR + +++A+K++VE+KV + IQ ++ ++EVDV LS RGG G + ++ Sbjct: 72 STVRIIIQGRKLPVTNAIKEYVEEKVAKAIQNFAHTLKEVDVTLSARGGDTGTHGKKEQK 131 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 222 +VT++T R+GVVR E+ Y +IDLV I+ KL ++KEK G+ Sbjct: 132 VDVTIFTLRNGVVRVEDRESNLYAAIDLVCDKIRSKLTRVKEKAITKGK 180 [82][TOP] >UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI Length = 187 Score = 97.1 bits (240), Expect = 1e-18 Identities = 64/183 (34%), Positives = 96/183 (52%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 369 ++ I G+N+E+++ ++ +V K+ +V L VDV LS R PR R Sbjct: 1 MQFAIHGKNIEVTEPIRDYVSSKLDKVFAHFDQLTMGVDVYLSV------ARNPRISRSH 54 Query: 368 -CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 EVT+ ++RAEE E Y SIDLV+ + R++RK KE+ + G Sbjct: 55 SAEVTVQASGT-IIRAEEETENLYASIDLVADKLHRQMRKYKERMQKKPKPKTG--LAVA 111 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 ++ + LP+ DE+ L +EVVRTKYF MPP++ EA+D L +VDHDF+ Sbjct: 112 NQAPISLPNGDEK-----------ATALPKEVVRTKYFAMPPMSPEEALDHLALVDHDFF 160 Query: 11 AFR 3 FR Sbjct: 161 VFR 163 [83][TOP] >UniRef100_C1CWW9 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWW9_DEIDV Length = 188 Score = 94.7 bits (234), Expect = 5e-18 Identities = 61/175 (34%), Positives = 97/175 (55%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 + GRN+E+SDA++ +V++K+ R + +++ + + V L+ R + GR R EV L Sbjct: 6 LSGRNVEVSDAMRDYVQEKLTR-LDRYNDQITDARVTLTVRDVRDAGR---RNRVEVQLN 61 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 +G++RAEEH Y +ID S +++R+LRK K R+MK + V P Sbjct: 62 VP-NGIIRAEEHHSDMYAAIDKASDVLERQLRKFKT------RYMKQ----RHETVPQPG 110 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 P E D + DD E + E+VR K FDM P++ +A+ Q+E + HDFY F Sbjct: 111 PGPAEAD---VNAGLDDVSEFMPEIVRQKRFDMRPMSPEDAVTQMEALGHDFYVF 162 [84][TOP] >UniRef100_B9I261 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I261_POPTR Length = 118 Score = 92.4 bits (228), Expect = 3e-17 Identities = 49/86 (56%), Positives = 60/86 (69%) Frame = -1 Query: 263 KLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTK 84 KLRKIK+KE+DHGRHMKG N+LK E P+ E E ++ +KDD+ ++E V TK Sbjct: 28 KLRKIKDKESDHGRHMKGFNKLKVRE---PMSQEVENVADTVSQRKDDDN--LDEAVHTK 82 Query: 83 YFDMPPLTVFEAIDQLEMVDHDFYAF 6 YFDMPPLTV EAI +L VDH FY F Sbjct: 83 YFDMPPLTVHEAIVRLGNVDHAFYGF 108 [85][TOP] >UniRef100_Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1IYK5_DEIGD Length = 186 Score = 91.3 bits (225), Expect = 6e-17 Identities = 59/176 (33%), Positives = 94/176 (53%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 + GRN++++DA++ +VE+K+ R + + S + + V L+ R + GR R EV L Sbjct: 6 LSGRNVDVTDAMRDYVEEKLTR-LDRFSDQITDARVVLTVRDVRDAGR---RNRVEVQLN 61 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 +G++RAEEH Y +ID S +++R+LRK K K H + P P Sbjct: 62 VP-NGIIRAEEHHADMYAAIDRASDVLERQLRKFKTKYLRHRQEAAPP----------PQ 110 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 P E D D+ E E+VRTK FD+ P++ +A+ Q+E + HDFY F+ Sbjct: 111 PGLAEAD----VNAGLDDTEFRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYVFK 162 [86][TOP] >UniRef100_C2D8Z3 Possible ribosome-associated inhibitor A n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8Z3_9ACTN Length = 192 Score = 90.9 bits (224), Expect = 7e-17 Identities = 59/175 (33%), Positives = 85/175 (48%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 I GR + +SDA++ HV+ KVG ++ DV L P + CEVT+Y Sbjct: 6 ISGRKVSVSDALRDHVQHKVGDALKVFDITPMSCDVVLRVDKNHS---NPDRKTCEVTVY 62 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 R+ VVR E +E Y +ID S + R+LRK K + D + + P P Sbjct: 63 V-RNNVVRVEASSEDMYAAIDAASDKVTRQLRKYKTRIIDRKQRSQAP---------APA 112 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 PS+D D I+ D +VR KY D+ P+T EA+ Q +++ HDFY F Sbjct: 113 PSKDLSDLIDEVADDD-------MLVREKYIDLHPMTEEEALVQTDLIGHDFYVF 160 [87][TOP] >UniRef100_Q9RVE7 Protein DR_1082 n=1 Tax=Deinococcus radiodurans RepID=UA82_DEIRA Length = 191 Score = 89.4 bits (220), Expect = 2e-16 Identities = 57/176 (32%), Positives = 97/176 (55%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 + GRN+E+++ ++++VE+K+ R + +++ + + V L+ R + R R EV L Sbjct: 6 LSGRNVEVTEPMREYVEEKLSR-LDRYTDQITDARVTLTVR---DVRNNERRNRVEVQLN 61 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 G++RAEEH Y +ID S +++R+LRK K R+MK R + LP Sbjct: 62 VPG-GIIRAEEHHADMYAAIDKASDVLERQLRKFKT------RYMK--QRQEGRPEPLPG 112 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 P+E E + DD E E+VR K F++ P++ +A+ Q+E + HDFY F+ Sbjct: 113 PAEAEVNAQGSGAAMDDVSEFHPEIVRQKRFELRPMSAEDAVVQMEALGHDFYVFQ 168 [88][TOP] >UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P2P9_9CLOT Length = 179 Score = 87.8 bits (216), Expect = 6e-16 Identities = 61/185 (32%), Positives = 103/185 (55%), Gaps = 2/185 (1%) Frame = -1 Query: 551 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVRE--VDVRLSTRGGGEFGRGPR 378 + ++K II G+N+E+++ +K +E+K+GR+ YLV + V+V LS + G + Sbjct: 1 MGAMKFIISGKNIEVTEGIKAAIEEKLGRL---DKYLVDDTIVNVTLSVQKGRQ------ 51 Query: 377 TRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 198 + EVT+ K H ++RAEE +E Y SIDLV +I+R++R+ K + + Sbjct: 52 --KIEVTIPMKGH-IIRAEEGSEDMYVSIDLVVDVIERQIRRYKTRLMNQ---------- 98 Query: 197 KFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 18 K+ ++ED++E DDE +I R+K F + P+ V EA Q+E++ HD Sbjct: 99 KYDGTSFKQEFMEQEDDVE-----DDEIRII----RSKKFAIKPMDVEEACVQMELLGHD 149 Query: 17 FYAFR 3 F+ FR Sbjct: 150 FFVFR 154 [89][TOP] >UniRef100_C8W7H2 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W7H2_ATOPD Length = 196 Score = 87.0 bits (214), Expect = 1e-15 Identities = 58/179 (32%), Positives = 91/179 (50%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 V + I GR + +S+A++ HV+ K+G ++ DV L P + E Sbjct: 2 VDIKISGRKVSISEALRAHVDQKIGDALKVFDITPMSCDVVLRVDKNPS---NPDRKTTE 58 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT++ R+ VVR ++ Y +ID + + R+LRK K K + HMK SE Sbjct: 59 VTVFV-RNNVVRVTASSDDMYAAIDEAADKVSRQLRKYKTKVVERRHHMK-------SER 110 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + L ED + IEI E+L +++VR KY D+ P+T EA+ Q +++ HDFY F Sbjct: 111 GIALTQEDLANLIEIPA-----EDLDDQLVREKYVDLEPMTEEEALVQTDLLGHDFYVF 164 [90][TOP] >UniRef100_B9I248 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I248_POPTR Length = 115 Score = 86.3 bits (212), Expect = 2e-15 Identities = 51/101 (50%), Positives = 61/101 (60%), Gaps = 14/101 (13%) Frame = -1 Query: 266 RKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDE--EELI---- 105 RKLRKIK+KE+DHGRHMKG N+LK E P+ E D ++ +KDD+ +EL Sbjct: 8 RKLRKIKDKESDHGRHMKGFNKLKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHL 64 Query: 104 --------EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 V TKYFDMPPLTV EAI +L VDH FY F Sbjct: 65 VTIHSIISSNAVHTKYFDMPPLTVDEAIVRLGNVDHAFYGF 105 [91][TOP] >UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7Y1_9CLOT Length = 187 Score = 85.1 bits (209), Expect = 4e-15 Identities = 60/180 (33%), Positives = 96/180 (53%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K++I G+ +EL+D +K VEDK+ + + ++ + EV V +S R + + E Sbjct: 7 MKILITGKKIELTDGIKGAVEDKLSK-LDRYLHEDTEVKVTVSARKAKQ--------KIE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ ++RAE+ E Y +ID+V + ++LR+ K K +KG + K E Sbjct: 58 VTIIPINGPIIRAEDSEENLYAAIDVVYDKLNKQLRRYKNK-------LKGKYQSKGQES 110 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 I ED E KD E +++ E R K FDM P++ EA+ Q+E+V HDFY FR Sbjct: 111 IRFQNIEDNAAE-----DKDGEFDIVIE--RHKKFDMKPMSPEEAVLQMELVGHDFYMFR 163 [92][TOP] >UniRef100_C8WMZ8 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMZ8_9ACTN Length = 191 Score = 84.3 bits (207), Expect = 7e-15 Identities = 57/181 (31%), Positives = 99/181 (54%), Gaps = 2/181 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRGPRTRR 369 + + + GR M ++DA++++ E+K+G ++ LV E+ + + PR Sbjct: 1 MSITVTGRKMPVTDALREYAEEKIGNSMKVMDIDPLVAEIVLFVEKNPAN-----PRPAV 55 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 CEVTL TK H ++R EEH E Y +ID+ ++ + R+LRK K K D R ++ + Sbjct: 56 CEVTLRTKGH-IIRVEEHEEDMYAAIDVAAAKVVRQLRKYKTKVVD--RKLRAAD----- 107 Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9 E I PS E +++ Q+ + +EVVR K + PLT EA+ +++++ HDF+A Sbjct: 108 ETIRIEPSAAGELDVDGLMQELSD----DEVVRVKTIEFEPLTEEEALVKIDLLGHDFFA 163 Query: 8 F 6 + Sbjct: 164 Y 164 [93][TOP] >UniRef100_C4V4X1 Ribosome-associated inhibitor A n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V4X1_9FIRM Length = 181 Score = 83.2 bits (204), Expect = 2e-14 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 1/177 (0%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 I+G+N+E++ A++ +VE +VG+ I K+ V E+ V LS G + + EVT Sbjct: 6 IRGKNVEVTPALRDYVEKRVGK-ITKYFDNVGEIAVLLSVEG--------KHHKVEVTAP 56 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-P 174 R ++R EEH+E Y SIDLV ++R++RK K K R +G + + E P Sbjct: 57 VARGILLRGEEHSEDMYSSIDLVIEKLERQIRKQKTKLAR--RFRQGGFKAEAVETFAQP 114 Query: 173 LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 +P EDE + VV+TK F + P+ V EAI Q+ +++H F+ FR Sbjct: 115 IPEEDE----------------LYPVVKTKRFTLQPMDVQEAIMQMNLLNHHFFVFR 155 [94][TOP] >UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile QCD-23m63 RepID=UPI00017F5F53 Length = 183 Score = 82.8 bits (203), Expect = 2e-14 Identities = 52/180 (28%), Positives = 100/180 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 + +II G+ +EL+DA+K +E K+ ++ +Y+ + DV+++ R R ++ E Sbjct: 1 MNIIISGKQIELTDAIKNKIESKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ T ++RAE+ E Y +ID+V + ++L+K K++ D + K ++F + Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDA 108 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 + L E E+ D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+ Sbjct: 109 EINLADEQED-------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159 [95][TOP] >UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630 RepID=Q18CN1_CLOD6 Length = 183 Score = 82.4 bits (202), Expect = 3e-14 Identities = 52/180 (28%), Positives = 100/180 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 + +II G+ +EL+DA+K +E K+ ++ +Y+ + DV+++ R R ++ E Sbjct: 1 MNIIISGKQIELTDAIKNKIETKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ T ++RAE+ E Y +ID+V + ++L+K K++ D + K ++F + Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDA 108 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 + L E E+ D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+ Sbjct: 109 EINLADEQED-------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159 [96][TOP] >UniRef100_C2KX79 Ribosome-associated inhibitor A n=1 Tax=Oribacterium sinus F0268 RepID=C2KX79_9FIRM Length = 176 Score = 82.4 bits (202), Expect = 3e-14 Identities = 60/180 (33%), Positives = 93/180 (51%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K+ I GRN+ L+D +K VE K+G+ + K +V LST+ ++ E Sbjct: 1 MKITITGRNLSLTDGLKNGVEKKLGK-LDKFFQAETPCNVTLSTQKD--------MQKIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K V+RAEE Y SIDLV +++R++RK K K RH Sbjct: 52 VTIPVKG-SVIRAEEATPDMYQSIDLVVDVLERQIRKYKNKLIQ--RHQAA--------- 99 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 S+ + IE P +D+EE ++VRTK+ D+ P+T EA Q+E++ H F+ F+ Sbjct: 100 -----SDFSSEFIEEKPAQDEEEI---KIVRTKHIDLKPMTAEEACLQMELLGHSFFVFQ 151 [97][TOP] >UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile RepID=C9XIR4_CLODI Length = 183 Score = 81.6 bits (200), Expect = 4e-14 Identities = 52/180 (28%), Positives = 100/180 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 + +II G+ +EL+DA+K +E K+ ++ +Y+ + DV+++ R R ++ E Sbjct: 1 MNIIISGKQIELTDAIKNKIETKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ T ++RAE+ E Y +ID+V + ++L+K K++ D + K ++F + Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDS 108 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 + L E E+ D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+ Sbjct: 109 EINLADEQED-------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159 [98][TOP] >UniRef100_Q9CHS8 Putative uncharacterized protein ygdA n=1 Tax=Lactococcus lactis subsp. lactis RepID=Q9CHS8_LACLA Length = 185 Score = 81.6 bits (200), Expect = 4e-14 Identities = 55/179 (30%), Positives = 94/179 (52%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++DA++ +VEDK+G+ + K+ EV ++ + E + + E Sbjct: 2 IKFNIRGENVEVTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYSE-----KRAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VTL K + +RAE+ ++ Y SID V ++R++RK K + R+ P F + Sbjct: 56 VTLPAK-NVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQAFGDE 113 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 PL DE E + ++VRTK+ + P+ EA+ Q++M+ HDFY F Sbjct: 114 FAPLEKADEVAEDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVF 160 [99][TOP] >UniRef100_Q3CZ63 Ribosomal subunit interface protein n=6 Tax=Streptococcus agalactiae RepID=Q3CZ63_STRAG Length = 184 Score = 81.6 bits (200), Expect = 4e-14 Identities = 57/179 (31%), Positives = 101/179 (56%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++++VE K+ +V +K+ +E+D R++ + E +T + E Sbjct: 2 IKYSIRGENIEVTEAIREYVETKLSKV-EKYFNEAQELDTRVNLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V Sbjct: 56 VTILIDSI-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQV 109 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 E E P DEE + + +VRTK ++ P+ V EA+ Q+E++ HDF+ + Sbjct: 110 FTT--------EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIY 157 [100][TOP] >UniRef100_Q030Z0 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Lactococcus lactis subsp. cremoris SK11 RepID=Q030Z0_LACLS Length = 185 Score = 81.3 bits (199), Expect = 6e-14 Identities = 55/179 (30%), Positives = 95/179 (53%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++DA++ +VEDK+G+ + K+ EV ++ + E + + E Sbjct: 2 IKFNIRGENVEVTDAIRDYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTE-----KRAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VTL K + +RAE+ ++ Y SID V ++R++RK K + R+ P F + Sbjct: 56 VTLPAK-NVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQVFGDE 113 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 PL + DE E + ++VRTK+ + P+ EA+ Q++M+ HDFY F Sbjct: 114 FAPLDTTDEVAEDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVF 160 [101][TOP] >UniRef100_A2RIX0 Putative Sigma 54 modulation protein n=2 Tax=Lactococcus lactis RepID=A2RIX0_LACLM Length = 185 Score = 80.9 bits (198), Expect = 8e-14 Identities = 55/179 (30%), Positives = 95/179 (53%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++DA++ +VEDK+G+ + K+ EV ++ + E + + E Sbjct: 2 IKFNIRGENVEVTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTE-----KRAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VTL K + +RAE+ ++ Y SID V ++R++RK K + R+ P F + Sbjct: 56 VTLPAK-NVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQVFGDE 113 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 PL + DE E + ++VRTK+ + P+ EA+ Q++M+ HDFY F Sbjct: 114 FAPLDTTDEVAEDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVF 160 [102][TOP] >UniRef100_Q3DA79 Ribosomal subunit interface protein n=2 Tax=Streptococcus agalactiae RepID=Q3DA79_STRAG Length = 184 Score = 80.9 bits (198), Expect = 8e-14 Identities = 57/179 (31%), Positives = 101/179 (56%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++++VE K+ +V +K+ +E+D R++ + E +T + E Sbjct: 2 IKYSIRGENIEVTEAIREYVETKLSKV-EKYFNEEQELDTRVNLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V Sbjct: 56 VTILIDSI-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQV 109 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 E E P DEE + + +VRTK ++ P+ V EA+ Q+E++ HDF+ + Sbjct: 110 FTT--------EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIY 157 [103][TOP] >UniRef100_B1SBZ3 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SBZ3_9STRE Length = 182 Score = 80.1 bits (196), Expect = 1e-13 Identities = 53/179 (29%), Positives = 100/179 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K ++G N+E++DA++ +VE K+G+ I+K+ +E+D R++ + E +T + E Sbjct: 2 IKYSVRGENIEVTDAIRNYVESKLGK-IEKYFNAEQELDARVNLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV+ I+R++RK K K R +++ Sbjct: 56 VTILVNSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIAKKHREKVPASQI----- 109 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 SE E + ++ P + VVRTK+ + P+ + EA+ Q++++ HDF+ + Sbjct: 110 ---FTSEFEAEPVDEGPAVN--------VVRTKHVSLKPMDLDEALLQMDLLGHDFFIY 157 [104][TOP] >UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FVY1_9CLOT Length = 194 Score = 79.7 bits (195), Expect = 2e-13 Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 2/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +KL I G+ MEL+ +K ++E K+ ++ Y+ + DV+++ + GR + E Sbjct: 9 MKLTISGKQMELTQGIKDNIESKLSKL---DKYISPDTDVKVTV--SAKKGR----HKIE 59 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP--NRLKFS 189 VT+ K V+RAEE E Y +IDLV ++ +L+K K+K + K + + + Sbjct: 60 VTIAPKNGHVIRAEESQENLYPAIDLVVDKLKIQLKKYKDKMQKRHQENKSIRFDSPEIN 119 Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9 + IL ED EDE+ I + R K ++ P++ EA+ Q+E+V HDFY Sbjct: 120 DSILEEDLEDFEDELFI-------------IKRRKRINIKPMSEEEAVLQMELVGHDFYI 166 Query: 8 FR 3 FR Sbjct: 167 FR 168 [105][TOP] >UniRef100_B4U4G1 Ribosomal subunit interface protein n=1 Tax=Streptococcus equi subsp. zooepidemicus MGCS10565 RepID=B4U4G1_STREM Length = 182 Score = 79.3 bits (194), Expect = 2e-13 Identities = 58/179 (32%), Positives = 101/179 (56%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +VE K+ + I+K+ + +E+D R++ + E +T + E Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVVEQEIDARVNLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR-----EKMSTSQV 109 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 SE E ++ E TP+ +VVRTK + P+ V EA Q+E++ HDF+ + Sbjct: 110 ---FTSEFEAEQAEETPE--------IKVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157 [106][TOP] >UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH Length = 178 Score = 79.3 bits (194), Expect = 2e-13 Identities = 55/180 (30%), Positives = 94/180 (52%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 ++ II G+N+++++ +K + +K+G+ ++K+ E+ V LS + + E Sbjct: 1 MRYIISGKNIDVTEGLKSAIYEKIGK-LEKYFNPEAEIHVTLSVEKDRQ--------KIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K + +VRAE+ + Y SIDLV +I+R+L+K K K D + N F +V Sbjct: 52 VTIPMKGN-IVRAEQVSNDMYASIDLVEEVIERQLKKYKSKLKDMNQSAANFNPSFFEDV 110 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 L + +E++I IT R K F M P+ EA Q+E++ H+FY FR Sbjct: 111 ---LNEDSDEEDINIT--------------RVKRFAMKPMDAEEACVQMELLGHNFYVFR 153 [107][TOP] >UniRef100_A7NNI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NNI5_ROSCS Length = 198 Score = 79.3 bits (194), Expect = 2e-13 Identities = 56/180 (31%), Positives = 89/180 (49%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 + LI+ RN +LSD +QH+E K+ R+ + YL R V + G R + Sbjct: 6 MNLIVNSRNGKLSDRQRQHIEQKLSRLDR---YLDRIDKVTVEHMEEMRRNEG-NVHRVQ 61 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +VRAE A Y +ID V +QR++ + K+K GR R + ++ Sbjct: 62 VTVVGDHGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDKHWRRGRL-----RRQGGQI 116 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 + LP + P DEEE +VRTK F + P+ EA++Q+E++ H F+ F+ Sbjct: 117 VEALPEMNAA-----APAPIDEEEQRPRIVRTKEFQVKPMYSDEAVEQMELLGHSFFIFQ 171 [108][TOP] >UniRef100_C0MH43 Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Steptococcus equi subsp. zooepidemicus H70 RepID=C0MH43_STRS7 Length = 182 Score = 79.0 bits (193), Expect = 3e-13 Identities = 58/179 (32%), Positives = 101/179 (56%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E +T + E Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR-----EKVSTSQV 109 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 SE E +++E TP+ +VVRTK + P+ V EA Q+E++ HDF+ + Sbjct: 110 ---FTSEFEAEQVEETPE--------IKVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157 [109][TOP] >UniRef100_A8S366 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S366_9CLOT Length = 187 Score = 79.0 bits (193), Expect = 3e-13 Identities = 63/191 (32%), Positives = 103/191 (53%), Gaps = 1/191 (0%) Frame = -1 Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGG 399 +S+S + L ++ I GRN+E++ +K VE K+G++ +H + EV V LS + Sbjct: 1 MSLSQEKELMFMRYTITGRNIEVTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDR 58 Query: 398 EFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 219 + + EVT+ K + +RAEE + Y SIDLV II+R++R+ ++K D Sbjct: 59 Q--------KIEVTIPVKGN-TIRAEESSTDMYVSIDLVEEIIERQIRRYRKKLID---- 105 Query: 218 MKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQ 39 K + FS+ + +EEDE++ DDE ++V+TK F + P EA Q Sbjct: 106 -KKQAAISFSQAFI-----EEEDEVQ-----DDE----IQIVKTKKFAIKPTIPEEACLQ 150 Query: 38 LEMVDHDFYAF 6 +EM+ H+FY F Sbjct: 151 MEMLGHNFYVF 161 [110][TOP] >UniRef100_C7QZG8 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QZG8_JONDD Length = 219 Score = 78.6 bits (192), Expect = 4e-13 Identities = 51/190 (26%), Positives = 99/190 (52%), Gaps = 11/190 (5%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +++++ GR+ E++D ++H E+K+ ++ Q ++ R VDV ++ + R+ R E Sbjct: 1 MEIVVVGRHTEVADRFREHAEEKLSKIAQ-YAPTARRVDVEVTHEYNPR--QSARSERVE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH----MKGPNRLK 195 +T+ K V+RAE ++ +G++DL +Q +LR+ E++ R ++ P L Sbjct: 58 LTVRDKGP-VIRAEAASDDRFGALDLALDKLQERLRRAHERKYTSKRRIPRKLEVPKDLD 116 Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEE-------VVRTKYFDMPPLTVFEAIDQL 36 E+I +E+ P E +E ++R K + P+TV +AID++ Sbjct: 117 AIEMIPDPEPPTQEEATPSVPHPTQPGETVEVQLGDSPVIIRQKLHNASPMTVDDAIDEM 176 Query: 35 EMVDHDFYAF 6 E+V HDF+ F Sbjct: 177 ELVGHDFFLF 186 [111][TOP] >UniRef100_B9CNR8 Light-repressed protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CNR8_9ACTN Length = 195 Score = 78.6 bits (192), Expect = 4e-13 Identities = 55/179 (30%), Positives = 89/179 (49%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 V + I GR + +SDA++ HVE+K+G ++ DV L + E Sbjct: 2 VDIKISGRKVTVSDALRSHVEEKIGDALKVFDIQPMTCDVVLRVDKNPS---NLERKSVE 58 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT++ R+ VVR + YG+ID + + R+LRK K + D H + S+ Sbjct: 59 VTVFV-RNSVVRVVSSGDDMYGAIDEAAEKVTRQLRKYKTRIVDKHHHAQNTRGRALSQ- 116 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 E+ + IE TP +D +++L+ E KY D+ P+T EA+ Q +++ HDFY F Sbjct: 117 ------EELANLIE-TPAEDLDDQLVRE----KYIDLLPMTEEEALVQTDLLGHDFYVF 164 [112][TOP] >UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHR0_9FIRM Length = 178 Score = 78.6 bits (192), Expect = 4e-13 Identities = 60/179 (33%), Positives = 97/179 (54%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K II G+N++++ +++ VE K+G+ + ++ E+ V LS + G + + E Sbjct: 1 MKFIIIGKNIDVTPGLREAVESKLGK-LGRYFTPNTEIHVTLSVQKGHQ--------KIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K G+VR+E+ + Y SIDLV +I+R+LRK K K R +G N F + Sbjct: 52 VTIPVKG-GLVRSEQESSDMYVSIDLVEEVIERQLRKYKNKLV--AREQEGGN---FKQE 105 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 D ED IE D+ E+ ++VRTK F P+ +A Q+E++ HDFY F Sbjct: 106 FF-----DAEDNIE------DDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFYVF 151 [113][TOP] >UniRef100_Q4L4H7 Uncharacterized protein SH2139 n=1 Tax=Staphylococcus haemolyticus JCSC1435 RepID=Y2139_STAHJ Length = 192 Score = 78.6 bits (192), Expect = 4e-13 Identities = 54/180 (30%), Positives = 96/180 (53%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366 ++ I G N+ ++DA++ ++EDK+G++ + + + V V++ T T + Sbjct: 2 IRFEIHGDNLTITDAIRNYIEDKIGKLERYFNDVPNAVAHVKVKTYQNS-------TTKI 54 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 EVT+ K + +RAEE + Y IDLV+S ++R++RK K + + +H F Sbjct: 55 EVTIPLK-NVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRV--NRKHKTHGEPEAFVA 111 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + P E+ +D + P D E E+I R+K F + P+ EA+ Q+E++ HDFY F Sbjct: 112 EVQEAPPENVDD-VNAEPTNDSEIEII----RSKQFSLKPMDSEEAVLQMELLGHDFYIF 166 [114][TOP] >UniRef100_C5EVT1 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVT1_9FIRM Length = 187 Score = 78.2 bits (191), Expect = 5e-13 Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 1/191 (0%) Frame = -1 Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGG 399 +S+S + L ++ I GRN+E++ +K VE K+G++ +H + EV V LS + Sbjct: 1 MSLSQEKELMIMRYTITGRNIEVTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDR 58 Query: 398 EFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 219 + + EVT+ K + +RAEE + Y SIDLV +I+R++R+ ++K D Sbjct: 59 Q--------KIEVTIPVKGN-TIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID---- 105 Query: 218 MKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQ 39 K + FS+ + +EEDE++ DDE ++V+TK F + P EA Q Sbjct: 106 -KKQAAISFSQAFI-----EEEDEVQ-----DDE----IQIVKTKKFAIKPTIPEEACLQ 150 Query: 38 LEMVDHDFYAF 6 +EM+ H FY F Sbjct: 151 MEMLGHSFYVF 161 [115][TOP] >UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJJ3_EUBSP Length = 179 Score = 78.2 bits (191), Expect = 5e-13 Identities = 53/179 (29%), Positives = 97/179 (54%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K II G+N++++ +K+ VE+K+G+ ++++ E+ V LS + ++ E Sbjct: 1 MKFIIIGKNIDVTPGLKEAVENKLGK-LERYFTPDTEIHVTLSVQR--------ERQKIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K G++R+E+ + Y SIDLV +I+R+LRK K K RH +G K Sbjct: 52 VTIPVKG-GIIRSEQESSDMYVSIDLVEEVIERQLRKYKNKLI--ARHQEGSGNFK---- 104 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ++ + + +D+ E+ ++VRTK F P+ +A Q+E++ HDF+ F Sbjct: 105 ---------QEFFDSGERSEDDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFFVF 152 [116][TOP] >UniRef100_A8U6N5 Ribosomal subunit interface protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U6N5_9LACT Length = 180 Score = 78.2 bits (191), Expect = 5e-13 Identities = 57/180 (31%), Positives = 99/180 (55%), Gaps = 2/180 (1%) Frame = -1 Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360 K ++G N+E++ A++ +VE KVG+V +K+ V E ++ + + +T + EV Sbjct: 3 KYNVRGENIEVTAAIRSYVEKKVGKV-EKYFNDVPEATAHVNLKTYSD-----KTAKVEV 56 Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180 T+ + V+RAEE + YGS+DLVS ++R++RK K K R + S V+ Sbjct: 57 TIPLP-YLVLRAEETSPDLYGSVDLVSDKLERQMRKYKTKIN---------RRTRGSNVV 106 Query: 179 LP--LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +P LP E++E E+E+ +VRTK + P+ EA+ Q++M+ H+F+ F Sbjct: 107 VPPVLPGEEQESH---------EDEV--NIVRTKRLSLKPMDSEEAVLQMDMLGHNFFIF 155 [117][TOP] >UniRef100_B9ND14 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ND14_POPTR Length = 102 Score = 78.2 bits (191), Expect = 5e-13 Identities = 46/98 (46%), Positives = 57/98 (58%), Gaps = 14/98 (14%) Frame = -1 Query: 254 KIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDE--EELI-------- 105 KIK+KE+DHGRHMKG N+ K E P+ E D ++ +KDD+ +EL Sbjct: 2 KIKDKESDHGRHMKGFNKFKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHLVTIH 58 Query: 104 ----EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 V TKYFDMPP+TV EAI +L VDH FY FR Sbjct: 59 SIISSNAVHTKYFDMPPVTVDEAIVRLGNVDHAFYGFR 96 [118][TOP] >UniRef100_B8BRE6 Light-repressed protein a n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRE6_THAPS Length = 198 Score = 78.2 bits (191), Expect = 5e-13 Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 4/182 (2%) Frame = -1 Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT 357 +++ G N++L+ A+ +V K+ + + K V DV L+ + P+ + Sbjct: 7 IVVTGDNIDLTPALSDYVNSKIEKTVGKLPLAVSHCDVYLTVN------KNPKVKDAHTA 60 Query: 356 --LYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFS 189 + T + R E + Y SIDLV++ + RKLRK KE+ D HG G N + Sbjct: 61 EVVTTLKGTTFRVAESSPDMYASIDLVAARLARKLRKYKERRLDGYHGGPNMGEN---IA 117 Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9 EV+ + ++ ED E D ++ ++ +V T P+++ EAI L+ +DHDFY Sbjct: 118 EVLNAIEVDESEDGAEEESYIDPDQAVVTKVKST------PISIKEAIFALDYIDHDFYV 171 Query: 8 FR 3 FR Sbjct: 172 FR 173 [119][TOP] >UniRef100_Q5KV92 Ribosomal protein S30EA n=1 Tax=Geobacillus kaustophilus RepID=Q5KV92_GEOKA Length = 183 Score = 77.4 bits (189), Expect = 8e-13 Identities = 55/175 (31%), Positives = 103/175 (58%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 ++G N+E++ A++++VE K+G+ ++++ +V V ++ + + G+G + EVT+ Sbjct: 5 VRGENLEVTPALREYVEKKIGK-LERYFDGTEDVHVHVNLKVYND-GQG----KIEVTI- 57 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 H ++RAEE E Y +IDLV+ ++R++RK K K + K +R K +++ P+ Sbjct: 58 PMPHLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKEAKLAAPV 112 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 PS E ++EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F Sbjct: 113 PSGASAAE-------NNEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 158 [120][TOP] >UniRef100_C0M6F8 Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Streptococcus equi subsp. equi 4047 RepID=C0M6F8_STRE4 Length = 182 Score = 77.4 bits (189), Expect = 8e-13 Identities = 58/179 (32%), Positives = 100/179 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E +T + E Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR-----EKMSTSQV 109 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 SE E ++ E TP+ +VVRTK + P+ V EA Q+E++ HDF+ + Sbjct: 110 ---FTSEFEAEKAEETPE--------IKVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157 [121][TOP] >UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile ATCC 43255 RepID=UPI00017F5ACC Length = 185 Score = 77.0 bits (188), Expect = 1e-12 Identities = 53/180 (29%), Positives = 96/180 (53%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +++I+ GR M+L+D +K +V+ K+ R+ YL E +V+++ + ++ E Sbjct: 1 MQIIVSGRQMKLTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F Sbjct: 52 VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFEN- 107 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 L D E + ++DE +IE R K F++ P++ EAI Q+E+V H+FY FR Sbjct: 108 ---LDFIDNSSEFDDYDDEEDENIVIE---RRKKFNVKPMSSEEAILQMELVGHNFYMFR 161 [122][TOP] >UniRef100_Q5M196 Ribosomal subunit interface protein, ribosomal protein S30AE family n=2 Tax=Streptococcus thermophilus RepID=Q5M196_STRT1 Length = 182 Score = 77.0 bits (188), Expect = 1e-12 Identities = 60/179 (33%), Positives = 99/179 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +VE K+ +V +K+ + +E+ R++ + E +T + E Sbjct: 2 IKCSIRGENIEVTEALRDYVESKLSKV-EKYFHEDQELHARVNLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ T +RAE+ + YGSIDLV I R++RK K K R K P FS Sbjct: 56 VTIPTGSV-TLRAEDVSLDMYGSIDLVVDKIARQIRKNKTKIARKYRE-KVPTGEMFS-- 111 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +E ++E+E P EVVRTK ++ P+ V EAI Q+E++ HDF+ + Sbjct: 112 -----TEFNKEEVEEAPAV--------EVVRTKNIELKPMDVEEAILQMELLGHDFFIY 157 [123][TOP] >UniRef100_A9W9Y4 Ribosomal subunit interface protein n=2 Tax=Chloroflexus RepID=A9W9Y4_CHLAA Length = 197 Score = 77.0 bits (188), Expect = 1e-12 Identities = 52/184 (28%), Positives = 97/184 (52%), Gaps = 4/184 (2%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS---TRGGGEFGRGPRTR 372 ++L I+ RN ++SD + H+E+K+ + ++++ + + + V + R GE Sbjct: 1 MELTIKSRNGKISDRQRAHIEEKLSK-LERYLHGITSITVEVQHEQQRNAGE------VY 53 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM-KGPNRLK 195 R + TL + ++RAEE A Y +ID V ++QR++ + K+K R + PN L Sbjct: 54 RVQTTLVAEHGVILRAEERAPDLYAAIDEVQEVLQRQIARYKDKYWRRSREQRRAPNGLT 113 Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15 +E + + E TP + E V+RTK F + P+ V +AI+Q+E++ H+F Sbjct: 114 PAEEV---AIAEAEAAALATPTEVGSE---ARVIRTKTFRLRPMFVDDAIEQMELLGHNF 167 Query: 14 YAFR 3 + F+ Sbjct: 168 FVFQ 171 [124][TOP] >UniRef100_A3CPW1 30S ribosomal interface protein S30EA, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CPW1_STRSV Length = 180 Score = 77.0 bits (188), Expect = 1e-12 Identities = 57/179 (31%), Positives = 101/179 (56%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++DA++ +V K+ + I+K+ +E+D R++ + E +T + E Sbjct: 2 LKYSIRGENLEVTDALRDYVVSKLEK-IEKYFQAEQELDARVNLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV+ I+R++RK K K ++ NR K + Sbjct: 56 VTIPLGSI-TLRAEDISQDMYGSIDLVTDKIERQIRKNKTK-------IERKNRNKVATS 107 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 L S EE EE+ +VVR+K+ D+ P+ + EAI Q++++ HDF+ + Sbjct: 108 QLFTDSFAEE-----------AEEVPSKVVRSKHIDLKPMDLEEAILQMDLLGHDFFIY 155 [125][TOP] >UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile RepID=C9XLM7_CLODI Length = 187 Score = 77.0 bits (188), Expect = 1e-12 Identities = 52/180 (28%), Positives = 98/180 (54%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +++I+ GR M+L+D +K +V+ K+ R+ YL E +V+++ + ++ E Sbjct: 1 MQIIVSGRQMKLTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F + Sbjct: 52 VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENL 108 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 + + E D+ + DDEE+ + R K F++ P++ EAI Q+E+V H+FY FR Sbjct: 109 DF-IDNSSEFDDYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 163 [126][TOP] >UniRef100_C7ML59 Ribosomal subunit interface protein n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7ML59_CRYCD Length = 188 Score = 77.0 bits (188), Expect = 1e-12 Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 3/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRG-PRTR 372 +++ + GR M ++DA+K + E+K+G ++ L+ EV + + E R R Sbjct: 1 MEISVTGRKMPVTDALKSYAEEKIGNSMKVMDIDPLIAEVILHV------EQNRAIARPA 54 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 CEVT+ K H ++R EEH E Y +ID+ ++ + R+LRK K + + + Sbjct: 55 ICEVTMTAKGH-IIRVEEHEEDMYAAIDVAAAKVLRQLRKFKTRVVERNTRTDAASIRSA 113 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 L L + EE DDE VVR K D+ PLT EA+ +++++ HDF+ Sbjct: 114 KSAKLDLDALMEE-------LSDDE------VVREKSIDLQPLTEEEALVEIDLLGHDFF 160 Query: 11 AF 6 A+ Sbjct: 161 AY 162 [127][TOP] >UniRef100_C5R7Z6 Ribosome-associated inhibitor protein Y n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R7Z6_WEIPA Length = 238 Score = 77.0 bits (188), Expect = 1e-12 Identities = 57/199 (28%), Positives = 107/199 (53%), Gaps = 4/199 (2%) Frame = -1 Query: 587 GAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQ----KHSYLVREVDVR 420 G S S G ++ ++G N+E++DA+ +++E ++ R+ + + SY+ R V+VR Sbjct: 35 GILSYKFSQTGDRIMLEFKVRGENIEITDAMSEYIEKRISRLERYLNTEASYIAR-VNVR 93 Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240 G T + EVT+ + ++RAE+ Y ++D VS ++R++RK K K Sbjct: 94 SYKEG---------TFKTEVTIQLP-YLLLRAEDTQTDMYQTVDFVSDKLERQIRKYKTK 143 Query: 239 ETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLT 60 R KG L+ ++ + P+ E+ P+ +D+ E+VRTK+ D+ P+ Sbjct: 144 VNRKSRE-KGYKGLENTDFMAVDPAAAVEE-----PEPEDDGL---EIVRTKHVDLKPMD 194 Query: 59 VFEAIDQLEMVDHDFYAFR 3 V EA+ Q+E++ H+F+ F+ Sbjct: 195 VEEAVLQMELLGHEFFIFQ 213 [128][TOP] >UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2X0_ABIDE Length = 175 Score = 77.0 bits (188), Expect = 1e-12 Identities = 52/180 (28%), Positives = 92/180 (51%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K II GR ++D ++ +E+K+G++ Y + +V ++ + + ++ E Sbjct: 1 MKYIINGRGTNVTDGLRNAIEEKLGKL---EHYFTPDTEVHVTLKVEKD------RQKVE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K H ++RAE+ ++ Y SIDL+ II+R+LR+ K K D + F+ Sbjct: 52 VTVPVKGH-IIRAEQVSDDMYVSIDLIEDIIERQLRRYKTKIVDSKQSASN-----FTSA 105 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 + Q DD E+ +V+RTK F + P+ EA Q+E+++H FY FR Sbjct: 106 FM---------------QDDDYEDEDVKVIRTKRFAVKPMDPEEACVQMELLNHSFYVFR 150 [129][TOP] >UniRef100_C2LVK8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus hominis SK119 RepID=C2LVK8_STAHO Length = 191 Score = 77.0 bits (188), Expect = 1e-12 Identities = 50/183 (27%), Positives = 97/183 (53%), Gaps = 4/183 (2%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366 ++ I G N+ ++DA++ ++E+K+G++ + + + V V++ T + Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYQNS-------ATKI 54 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 EVT+ K + +RAEE + Y IDLV+S ++R++RK K + R P Sbjct: 55 EVTIPLK-NVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKNRDNGEPE------ 107 Query: 185 VILPLPSEDE---EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15 P +E + +++E T + +E E+ E++R+K F + P+ EA+ Q++++ HDF Sbjct: 108 ---PFIAEQQTVVNEDVEATSESSNENEI--EIIRSKQFSLKPMDSEEAVLQMDLLGHDF 162 Query: 14 YAF 6 Y F Sbjct: 163 YIF 165 [130][TOP] >UniRef100_C0U8U2 SSU ribosomal protein S30P n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=C0U8U2_9ACTO Length = 228 Score = 77.0 bits (188), Expect = 1e-12 Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 4/183 (2%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRC 366 ++++++GRN+E+ + +QHVEDKVG+ + L + +DV L + + +R Sbjct: 1 MEIVVRGRNVEVPEHYRQHVEDKVGQSDRFDGKLKILRIDVELFHEKNPR--QSGKCQRV 58 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMKGPNRLKFS 189 E+TL K VVRAE A Y ++DL + + +LRK ++ HGR R+ Sbjct: 59 EITLRGKGP-VVRAEAAAPDFYAALDLAAGKLDHRLRKAADRRRVHHGRRTPASVRVGGG 117 Query: 188 EVILPLP-SEDEEDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15 + S D + E+ P D +E L ++VR K+ P+ V +A+ ++E+V HDF Sbjct: 118 APDTDVTESFDRDRELAEGPHVTDLDEHLPGQIVREKHHPATPMHVDQALHEMELVGHDF 177 Query: 14 YAF 6 + F Sbjct: 178 FLF 180 [131][TOP] >UniRef100_B0G387 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G387_9FIRM Length = 177 Score = 77.0 bits (188), Expect = 1e-12 Identities = 54/179 (30%), Positives = 97/179 (54%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K II G+N++++ +K VE K+G+ +Q++ E+ V LS + ++ E Sbjct: 1 MKFIIIGKNIDVTPGLKDAVESKLGK-LQRYFTPDTEIHVTLSVQ--------KEHQKIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K + ++R+E+ ++ Y SIDLV +I+R+LRK K K ++ +G N FS+ Sbjct: 52 VTIPVKGN-IIRSEQESDDMYVSIDLVEEVIERQLRKYKNKLV--AKNQEGNN---FSKT 105 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + E+DE++I VRTK F + P+ +A Q+E++ H+F+ F Sbjct: 106 LFETEESIEDDEVKI--------------VRTKRFGIKPMYPEDACVQMELLGHNFFVF 150 [132][TOP] >UniRef100_C2LQ50 Ribosomal subunit interface protein, ribosomal protein S30AE family n=1 Tax=Streptococcus salivarius SK126 RepID=C2LQ50_STRSL Length = 182 Score = 76.6 bits (187), Expect = 1e-12 Identities = 58/179 (32%), Positives = 100/179 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +VE K+ +V +K+ +E++ R++ + E +T + E Sbjct: 2 IKYSIRGENIEVTEALRDYVESKLSKV-EKYFNEDQELNARVNLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ T +RAE+ ++ YGSIDLV I+R++RK K K R K P FS Sbjct: 56 VTIPTGSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIARKHRE-KVPTGEVFS-- 111 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ++ +++E P EVVRTK ++ P+ V EAI Q+E++ HDF+ + Sbjct: 112 -----ADFNNEQVEEAPAV--------EVVRTKNIELKPMDVEEAILQMELLGHDFFIY 157 [133][TOP] >UniRef100_UPI0001BB5516 ribosomal subunit interface protein n=1 Tax=Streptococcus sp. 2_1_36FAA RepID=UPI0001BB5516 Length = 180 Score = 76.3 bits (186), Expect = 2e-12 Identities = 53/179 (29%), Positives = 102/179 (56%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +V K+ + I+K+ +E+D R++ + E +T + E Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQADQELDARVNLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV I+R++RK K K R +++ F++V Sbjct: 56 VTIPLGSI-TLRAEDISQDMYGSIDLVVDKIERQIRKNKTKIERKNRTKVSTSQI-FTDV 113 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ++ +E++ P K VVR+K+ D+ P+ + EA+ Q+E++ HDF+ + Sbjct: 114 VV--------EEVDEAPAK---------VVRSKHIDLKPMDLEEALLQMELLGHDFFIY 155 [134][TOP] >UniRef100_B8GDB0 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8GDB0_CHLAD Length = 197 Score = 76.3 bits (186), Expect = 2e-12 Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 4/184 (2%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKV---GRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 372 ++ I+ RN ++S+ ++H+E+K+ GR + + + EV G + Sbjct: 1 MEFTIKSRNGKISERQREHIEEKLAKLGRYLNGITSITVEVQHEQQRNVGEVY------- 53 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM-KGPNRLK 195 R + TL + ++RAEE A Y +ID V ++QR++++ K+K R + + N L Sbjct: 54 RVQTTLVAEHGVILRAEERAADLYAAIDAVQEVLQRQIQRYKDKYWRRSRELRRATNGLT 113 Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15 +E + +E E + E E + +V+RTK F + P+ V +AI+Q+E++ H F Sbjct: 114 PAEEVAIAEAETEAMTAPV------ETEPVAKVIRTKTFRLRPMFVDDAIEQMELLGHTF 167 Query: 14 YAFR 3 + F+ Sbjct: 168 FVFQ 171 [135][TOP] >UniRef100_C0BYR7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BYR7_9CLOT Length = 178 Score = 76.3 bits (186), Expect = 2e-12 Identities = 55/179 (30%), Positives = 94/179 (52%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K II G+N++++ +++ VE K+G+ ++K+ E+ V LS ++ E Sbjct: 1 MKFIISGKNIDVTPGLRETVEHKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K + ++R+E+ + Y SIDLV +I+R+LRK K K RH +G N Sbjct: 52 VTIPVKGN-IIRSEQVSSDMYVSIDLVEEVIERQLRKYKNKLV--ARHQEGGN------- 101 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 E E E + DDE ++VRTK F + P+ +A Q++++ HDF+ F Sbjct: 102 -----FRQEFFESEYATEDDDE----VKIVRTKRFGIKPMYPEDACIQMDLLGHDFFVF 151 [136][TOP] >UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AN97_9BACE Length = 179 Score = 76.3 bits (186), Expect = 2e-12 Identities = 53/179 (29%), Positives = 93/179 (51%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 ++ +I GRN+E++D +K+ VE+K+G+ + + EV V LS ++ E Sbjct: 4 MRFVIVGRNIEVTDGLKEAVEEKLGK-LDRFFAPDTEVKVTLSVE--------KERQKIE 54 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K ++R+E+ + Y SIDLV +I+R+L+K K K D K + F++ Sbjct: 55 VTIPVKG-SIIRSEQVSNDMYVSIDLVEEVIERQLKKYKNKLID-----KQQDAAAFAQE 108 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + D++ +++I +RTK FD+ P+ EA Q+E++ H FY F Sbjct: 109 YIDKEYVDDDADVKI--------------IRTKRFDVKPMDPEEACVQMELLGHSFYVF 153 [137][TOP] >UniRef100_C5WIE9 Ribosome-associated factor Y n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WIE9_STRDG Length = 182 Score = 75.9 bits (185), Expect = 2e-12 Identities = 56/179 (31%), Positives = 100/179 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E ++ + E Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KSSKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV I+R++RK K K R K P F+ Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-- 111 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +E E ++++ TP+ +VVRTK + P+ V EA Q+E++ HDF+ + Sbjct: 112 -----TEFEAEQVDETPE--------VKVVRTKNLTLKPMDVEEARLQMELLGHDFFIY 157 [138][TOP] >UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZI34_EUBR3 Length = 175 Score = 75.9 bits (185), Expect = 2e-12 Identities = 57/180 (31%), Positives = 96/180 (53%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +++ I G+N+EL++ +KQ VE+K+ + ++K +V V LS + + E Sbjct: 1 MRITISGKNIELTEGLKQAVEEKLSK-LEKFFKPDTDVYVTLSVEKDRQ--------KIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K H V+R+E+ + Y SIDLV +I+R+LRK + K + K++ Sbjct: 52 VTIPAKGH-VIRSEQVSNDMYVSIDLVEEVIERQLRKYRTKISAK----------KYAPA 100 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 I ++D +E DD E+ ++VRTK F M P+ +A Q+E+ HDF+ FR Sbjct: 101 IF------QDDFVEA----DDAEDEEIKIVRTKRFGMKPMYPEDACIQMELSGHDFFVFR 150 [139][TOP] >UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BAM2_9FIRM Length = 189 Score = 75.9 bits (185), Expect = 2e-12 Identities = 59/182 (32%), Positives = 93/182 (51%) Frame = -1 Query: 551 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 372 LS + II GRN++++ ++Q VE K+G++ Y E D+ ++ E + Sbjct: 9 LSCMNFIISGRNIDITPGLRQAVEQKLGKL---EKYFTPETDIIVTLSVEKE------RQ 59 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 + EVT+ K + ++R+E+ + Y SIDLV II+R+LRK K K +G + + Sbjct: 60 KIEVTIPVKGN-IIRSEQESSDMYVSIDLVEEIIERQLRKYKTKLI---AKQQGGHDFR- 114 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 E I S E DEIEI VRTK F + P+ +A Q+E++ H+FY Sbjct: 115 QEFIESDTSAAESDEIEI--------------VRTKRFGIKPMFPEDACIQMELLGHNFY 160 Query: 11 AF 6 F Sbjct: 161 VF 162 [140][TOP] >UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KKP2_9FIRM Length = 198 Score = 75.9 bits (185), Expect = 2e-12 Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 1/183 (0%) Frame = -1 Query: 551 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 372 L+S+ II G+N+E++ +K+ +E K+G+ ++++ E+ V LS G + Sbjct: 11 LNSMNFIISGKNIEVTPGLKEAIEQKLGK-LERYFTPETEIIVTLSVEKGRQ-------- 61 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 + EVT+ K ++R+E+ + Y SIDLV +I+R+LRK K K + Sbjct: 62 KIEVTIPVKG-SIIRSEQTSSDMYVSIDLVEEVIERQLRKYKNKLVAKSQ---------- 110 Query: 191 SEVILPLPSEDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15 +PS + E IE + D++E+ +VRTK F + P+ +A Q+E++ H F Sbjct: 111 GHPTAAVPSGSIKKEFIESDDESSDDDEI--RIVRTKKFGIKPMFPEDACIQMELLGHSF 168 Query: 14 YAF 6 + F Sbjct: 169 FVF 171 [141][TOP] >UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile QCD-23m63 RepID=UPI00017F60C6 Length = 185 Score = 75.5 bits (184), Expect = 3e-12 Identities = 53/180 (29%), Positives = 95/180 (52%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +++I+ GR M+L+D +K +V+ K+ R+ YL E +V+++ + ++ E Sbjct: 1 MQIIVSGRQMKLTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F V Sbjct: 52 VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENV 108 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 S + +D DDEE + R K F++ P++ EAI Q+E+V H+FY FR Sbjct: 109 DFIDNSSEFDDY-------DDEEYENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 161 [142][TOP] >UniRef100_UPI00004C2450 COG1544: Ribosome-associated protein Y (PSrp-1) n=1 Tax=Streptococcus pyogenes M49 591 RepID=UPI00004C2450 Length = 182 Score = 75.5 bits (184), Expect = 3e-12 Identities = 57/179 (31%), Positives = 99/179 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E R+ + E Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV I+R++RK K K R K P F+ Sbjct: 56 VTIPLDSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-- 111 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +E E +E++ P+ +VVRTK + P+ V EA Q+E++ HDF+ + Sbjct: 112 -----TEFEAEEVDEIPE--------VQVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157 [143][TOP] >UniRef100_B9MLV8 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLV8_ANATD Length = 181 Score = 75.5 bits (184), Expect = 3e-12 Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 2/181 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 + II G+N+E++DA+K+ +E K+ + ++++ L +V V LS E Sbjct: 1 MNFIISGKNIEVTDALKERIEKKLSK-LERYIKLNTDVHVTLSVEKISHI--------VE 51 Query: 362 VTLYTKRHGVV-RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ HG++ RAEE + Y +IDLV ++R++RK K K R K +E Sbjct: 52 VTI--PFHGMILRAEERSNDMYSAIDLVVDTLERQIRKFKTKIA---------KRAKDAE 100 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9 + + E EE P+K+ +EE E + +TK F + P++V EAI Q+ ++ H+F+ Sbjct: 101 SLRYMTFELEE------PEKEVQEENSEFRIAKTKRFPIKPMSVEEAILQMNLLGHNFFV 154 Query: 8 F 6 F Sbjct: 155 F 155 [144][TOP] >UniRef100_B9DV32 Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DV32_STRU0 Length = 182 Score = 75.5 bits (184), Expect = 3e-12 Identities = 59/179 (32%), Positives = 97/179 (54%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +VE K+ + I+K+ E+D R++ + E +T + E Sbjct: 2 IKFSIRGENIEVTEAIRDYVEAKLAK-IEKYFVEDSEIDTRVNLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ ++RAE+ ++ YGSIDLV I+R++RK K K R K P F Sbjct: 56 VTIILGSM-ILRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFR-- 111 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 SE E +E+ EE +VVRTK + P+ V EA Q+E++ HDF+ + Sbjct: 112 -----SEFETEEV--------EEGSEVKVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157 [145][TOP] >UniRef100_A7GUW3 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GUW3_BACCN Length = 179 Score = 75.5 bits (184), Expect = 3e-12 Identities = 62/180 (34%), Positives = 99/180 (55%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + I+++ EV V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-IERYFDTFPEVKVNLKVYSDKQ--------RVE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 52 VTIPFTDL--LLRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSAKTAFI- 107 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 LP + ++E++ E+EL E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 108 ----LPDQLGQEEVQ-------EDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 154 [146][TOP] >UniRef100_C2QJQ3 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Bacillus cereus R309803 RepID=C2QJQ3_BACCE Length = 180 Score = 75.5 bits (184), Expect = 3e-12 Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+G+ ++++ E+ V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLGK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 [147][TOP] >UniRef100_C0VBX3 SSU ribosomal protein S30P n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=C0VBX3_9MICO Length = 216 Score = 75.5 bits (184), Expect = 3e-12 Identities = 55/183 (30%), Positives = 101/183 (55%), Gaps = 4/183 (2%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +++++ GR+ ++ + ++HVEDK+ +V Q S LV+ VDV ++ + R E Sbjct: 1 MEIVVVGRHTDVPERFRRHVEDKLTKVTQL-SPLVQRVDVEVTHENNPKLS--DVRERVE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLK-FS 189 +T+ K V+RAE A+ YG++DL + +LR+ +++ DH R ++ P ++ + Sbjct: 58 LTVRAKGP-VIRAEAAADDRYGALDLAIDKLIERLRRSRDRRKDHRRTYVTAPVDVRPYD 116 Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEE--VVRTKYFDMPPLTVFEAIDQLEMVDHDF 15 EV P P E EE + + E +L + V+R K +TV +A+ ++E+V HDF Sbjct: 117 EVRSPEP-EPEESVPLVVDGEAVEHQLGDSPVVIRQKLHSADAMTVDDAVYEMELVGHDF 175 Query: 14 YAF 6 + F Sbjct: 176 FLF 178 [148][TOP] >UniRef100_A6CQE4 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CQE4_9BACI Length = 189 Score = 75.5 bits (184), Expect = 3e-12 Identities = 53/175 (30%), Positives = 91/175 (52%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 I+G N+E++ A++ HVE+K+G+ + ++ + DV ++ + + + + EVT+ Sbjct: 6 IRGENIEVTPAIRDHVENKIGK-LNRYFNETPDADVHVNLKVYPD-----KKTKVEVTI- 58 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 H V+RAEE E Y +IDL+ ++R++RK K K R P ++ L Sbjct: 59 PMPHLVLRAEERHEDMYAAIDLIVDKLERQIRKHKTKVNRKMREKGSPKEFFAAQEGLTT 118 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +E K E E +EVVRTK F++ P+ EAI Q+ ++ H F+ F Sbjct: 119 SQLNE---------KARETEENDEVVRTKQFNLKPMDSEEAILQMNLLGHSFFIF 164 [149][TOP] >UniRef100_Q5XAQ7 Ribosome-associated factor Y n=10 Tax=Streptococcus pyogenes RepID=RAFY_STRP6 Length = 182 Score = 75.5 bits (184), Expect = 3e-12 Identities = 57/179 (31%), Positives = 99/179 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E R+ + E Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV I+R++RK K K R K P F+ Sbjct: 56 VTIPLDSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-- 111 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +E E +E++ P+ +VVRTK + P+ V EA Q+E++ HDF+ + Sbjct: 112 -----TEFEAEEVDEIPE--------VQVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157 [150][TOP] >UniRef100_Q04E96 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Oenococcus oeni PSU-1 RepID=Q04E96_OENOB Length = 190 Score = 75.1 bits (183), Expect = 4e-12 Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 3/178 (1%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVE---DKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360 I+G NM +DA+ +++ +K+ I + + + ++VR +T + EV Sbjct: 6 IRGENMSTTDAINNYIKLRLEKLNNYIDQKNNPIAHINVRKYNE---------KTFKIEV 56 Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180 T+ + +RAEE Y ++DLVS+ + R++RK K + R +G + F+E I Sbjct: 57 TIPLP-YLTLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGIDFNEAI 114 Query: 179 LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 P+PS+ ED+ K D V+R K + P+ + EA+ Q+EM+DHDF+ F Sbjct: 115 DPVPSDTNEDK------KID-------VIRRKNLSLKPMDIEEAVLQMEMLDHDFFLF 159 [151][TOP] >UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z2Z4_EUBE2 Length = 175 Score = 75.1 bits (183), Expect = 4e-12 Identities = 53/179 (29%), Positives = 93/179 (51%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 ++ II GRN+++++ +K VE+K+G+ + + EV+V LS ++ E Sbjct: 1 MRFIITGRNIDITEGLKSAVEEKLGK-LDRFFAPETEVNVTLSVE--------KERQKIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K + ++R+E+ + Y SIDLV +I+R+L+K K K D K N F++ Sbjct: 52 VTIPVKGN-IIRSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVD-----KQQNAAAFAQE 105 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + +D+E +I +RTK F + P+ EA Q+E++ H+FY F Sbjct: 106 FVEKDYDDDEVKI----------------IRTKRFGIKPMDPEEACVQMELLGHNFYVF 148 [152][TOP] >UniRef100_C6SS06 Putative ribosome-associated protein n=2 Tax=Streptococcus mutans RepID=C6SS06_STRMN Length = 182 Score = 75.1 bits (183), Expect = 4e-12 Identities = 55/179 (30%), Positives = 96/179 (53%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++DA++ +VE K+ + I+K+ +E+D R++ + E +T + E Sbjct: 2 IKYSIRGENIEVTDAIRNYVESKLKK-IEKYFNAEQELDARINLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV I+R++RK K K R K + Sbjct: 56 VTI-PLAPVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHREKKPAAHV----- 109 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +E E +E+E P +VVRTK + P+ + EA Q++++ HDF+ + Sbjct: 110 ---FTAEFEAEEMEEAP--------AIKVVRTKNITLKPMDIEEARLQMDLLGHDFFIY 157 [153][TOP] >UniRef100_A0NI00 Ribosomal subunit interface protein n=1 Tax=Oenococcus oeni ATCC BAA-1163 RepID=A0NI00_OENOE Length = 190 Score = 75.1 bits (183), Expect = 4e-12 Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 3/178 (1%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVE---DKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360 I+G NM +DA+ +++ +K+ I + + + ++VR +T + EV Sbjct: 6 IRGENMSTTDAINNYIKLRLEKLNNYIDQKNNPIAHINVRKYNE---------KTFKIEV 56 Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180 T+ + +RAEE Y ++DLVS+ + R++RK K + R +G + F+E I Sbjct: 57 TIPLP-YLTLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGIDFNEAI 114 Query: 179 LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 P+PS+ ED+ K D V+R K + P+ + EA+ Q+EM+DHDF+ F Sbjct: 115 DPVPSDTNEDK------KID-------VIRRKTLSLKPMDIEEAVLQMEMLDHDFFLF 159 [154][TOP] >UniRef100_Q03M66 SSU ribosomal protein S30P / sigma 54 modulation protein n=1 Tax=Streptococcus thermophilus LMD-9 RepID=Q03M66_STRTD Length = 182 Score = 74.7 bits (182), Expect = 5e-12 Identities = 59/179 (32%), Positives = 98/179 (54%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +VE K+ +V +K+ + +E+ R++ + E +T + E Sbjct: 2 IKYSIRGENIEVTEALRDYVESKLSKV-EKYFHEDQELHARVNLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ T +RAE+ + YGSIDLV I R++RK K K R K P FS Sbjct: 56 VTIPTGSV-TLRAEDVSLDMYGSIDLVVDKIARQIRKNKTKIARKYRE-KVPTGEMFS-- 111 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +E ++E+E P EVVR K ++ P+ V EAI Q+E++ HDF+ + Sbjct: 112 -----TEFNKEEVEEAPAV--------EVVRIKNIELKPMDVEEAILQMELLGHDFFIY 157 [155][TOP] >UniRef100_A8AVW6 Ribosomal subunit interface protein n=1 Tax=Streptococcus gordonii str. Challis RepID=A8AVW6_STRGC Length = 180 Score = 74.7 bits (182), Expect = 5e-12 Identities = 52/179 (29%), Positives = 101/179 (56%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +V K+ + I+K+ +E+D R++ + E +T + E Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQADQELDARVNLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV I+R++RK K K R +++ F++ Sbjct: 56 VTIPLGSI-TLRAEDISQDMYGSIDLVVDKIERQIRKNKTKIERKNRTKVSTSQI-FTDA 113 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ++ +E++ P K VVR+K+ D+ P+ + EA+ Q+E++ HDF+ + Sbjct: 114 VV--------EEVDEAPAK---------VVRSKHIDLKPMDLEEALLQMELLGHDFFIY 155 [156][TOP] >UniRef100_D0BMS6 Ribosomal subunit interface protein n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BMS6_9LACT Length = 182 Score = 74.7 bits (182), Expect = 5e-12 Identities = 55/179 (30%), Positives = 96/179 (53%) Frame = -1 Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360 K I+G N+E+++A++ + E K+ + ++K+ V V ++ + E +T + EV Sbjct: 3 KYNIRGENIEVTEAIRNYAEKKLSK-LEKYFGDVANATVHVNLKVYTE-----KTAKVEV 56 Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180 T+ + V+RAEE + YGSIDLV ++R++RK K K R KG F + Sbjct: 57 TIPLP-YLVLRAEETSGDLYGSIDLVIDKLERQVRKYKTKINRKSRE-KG-----FDIPV 109 Query: 179 LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 P + P+ DE+E + E+VRTK D+ P+ EA+ Q+ M+ H+F+ ++ Sbjct: 110 AP-----------VVPEPVDEDESVLEIVRTKRVDLKPMDSEEAVLQMNMLGHNFFIYQ 157 [157][TOP] >UniRef100_C8NDQ1 Ribosomal subunit interface protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NDQ1_9LACT Length = 186 Score = 74.7 bits (182), Expect = 5e-12 Identities = 54/179 (30%), Positives = 97/179 (54%) Frame = -1 Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360 K I+G N+E+++A++Q+ E K+ + ++K+ V ++ + E +T + EV Sbjct: 9 KYNIRGENIEVTEAIRQYAEKKISK-LEKYFTDVANATAYVNLKVYTE-----KTAKVEV 62 Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180 T+ + V+RAEE + YGSIDLV ++R++RK K K + +R K +++ Sbjct: 63 TIPLP-YLVLRAEETSIDLYGSIDLVVDKLERQVRKHKTK-------INRKSREKGFDIV 114 Query: 179 LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 LP P+ +EEE E+VRTK D+ P+ EA+ Q+ M+ H+F+ ++ Sbjct: 115 LPT-----------LPEAPEEEETGLEIVRTKRIDLKPMDSEEAVLQMNMLGHNFFIYQ 162 [158][TOP] >UniRef100_C1WM73 SSU ribosomal protein S30P; sigma 54 modulation protein n=1 Tax=Kribbella flavida DSM 17836 RepID=C1WM73_9ACTO Length = 211 Score = 74.7 bits (182), Expect = 5e-12 Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 6/186 (3%) Frame = -1 Query: 545 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 366 SV ++++G + E+SD +Q+VE+K+ R I+K + V +V +S + R R Sbjct: 4 SVDVVVKGHHCEVSDRFRQYVEEKLAR-IEKVDHRVLRCEVEVSQEKNPR--QHDRAMRV 60 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH-GRHM-KGPNRLKF 192 E+T+YTK VVRAE ET + D+ ++ ++RK ++ H G H +G L Sbjct: 61 ELTMYTKGP-VVRAEACGETKQAAFDVSLDRLRAQVRKAADRRRVHRGEHAPEGLRHLNA 119 Query: 191 SEVILPL-PSEDEEDEIEITPQKDDEEELIEE---VVRTKYFDMPPLTVFEAIDQLEMVD 24 + + L P ++ E E+ QK + + V+R K P+++ +A+ +LE+V Sbjct: 120 KQPVNGLAPEAEDSTEDEVPTQKIGSLTVTGDGPLVMREKTHTAKPMSLDQALYELELVG 179 Query: 23 HDFYAF 6 HDFY F Sbjct: 180 HDFYLF 185 [159][TOP] >UniRef100_C0FTS3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FTS3_9FIRM Length = 176 Score = 74.7 bits (182), Expect = 5e-12 Identities = 55/179 (30%), Positives = 95/179 (53%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +++ I GRN+EL++ +K VEDK+ + ++K+ EV+V LS ++ E Sbjct: 1 MRIKITGRNIELTEGLKAAVEDKLNK-LEKYFTPDTEVNVTLSVE--------KERQKVE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K +R+E+ + Y SIDLV +I+R+L+K + K ++ + F Sbjct: 52 VTIPMKG-SYIRSEQVSSDMYVSIDLVEEVIERQLKKYRTKLVTKQQNAAAVFKQDFL-- 108 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 DE+ E D+EE+ +++RTK FDM P+ +A ++E++ HDFY F Sbjct: 109 -------DEKSE--------DDEEI--KIIRTKKFDMKPMYPEDACVEMELLGHDFYVF 150 [160][TOP] >UniRef100_C0CVD1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVD1_9CLOT Length = 176 Score = 74.7 bits (182), Expect = 5e-12 Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGGEFGRGPRTRRC 366 ++ I GRN+E++ +K VE K+G++ +H + EV V LS + + + Sbjct: 1 MRYTITGRNIEVTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDRQ--------KI 50 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 EVT+ K + +RAEE + Y SIDLV +I+R++R+ ++K D K L FS+ Sbjct: 51 EVTIPVKGN-TIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAALSFSQ 104 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + +++ED+I I V+TK F + P EA Q+EM+ H+FY F Sbjct: 105 AFIDEEEDEQEDDIRI--------------VKTKKFAIKPTIPEEACLQMEMLGHNFYVF 150 [161][TOP] >UniRef100_P28368 Uncharacterized protein yvyD n=1 Tax=Bacillus subtilis RepID=YVYD_BACSU Length = 189 Score = 74.7 bits (182), Expect = 5e-12 Identities = 52/175 (29%), Positives = 92/175 (52%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 I+G N+E++ A+K HVE K+G++ + + V + DV ++ + + + + EVT+ Sbjct: 5 IRGENIEVTPALKDHVERKIGKLERYFDHSV-DADVNVNLKFYND-----KESKVEVTI- 57 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 +R+E H E Y +IDL ++ ++R++RK K K R P L + + Sbjct: 58 PMTDLALRSEVHNEDMYNAIDLATNKLERQIRKHKTKVNRKFREQGSPKYLLANGL---- 113 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + +I Q D EEE ++VR K F++ P+ EAI Q+ M+ H+F+ F Sbjct: 114 -----GSDTDIAVQDDIEEEESLDIVRQKRFNLKPMDSEEAILQMNMLGHNFFVF 163 [162][TOP] >UniRef100_C2AF84 SSU ribosomal protein S30P; sigma 54 modulation protein n=1 Tax=Thermomonospora curvata DSM 43183 RepID=C2AF84_THECU Length = 221 Score = 74.3 bits (181), Expect = 7e-12 Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 19/197 (9%) Frame = -1 Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT 357 +I++GR+ E++D ++HV++K+ + I++ + + VDV +S R R E+T Sbjct: 3 IIVKGRHTEVNDRFREHVDNKLAK-IERFARKIIRVDVEVSEEHNPRLA--DRRERVELT 59 Query: 356 LYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH-GRHMKGPNRLKFSEVI 180 + + R V+RAE AE YG++DL ++ +LR+ ++ H + P +L E + Sbjct: 60 IRS-RGPVIRAEAAAEDRYGALDLALDKLEARLRRSADRRKIHYNSGTRAPAKLAHLEPL 118 Query: 179 LPLPSE-DEEDEIEITPQKDDEE--ELIEE---------------VVRTKYFDMPPLTVF 54 P+ ED E P + E EE VVR K+ P+T+ Sbjct: 119 TEPPAAAPPEDSAEGAPAAEPAAATEPAEEGGNVVPIAMDGDGPLVVREKFHRSAPMTID 178 Query: 53 EAIDQLEMVDHDFYAFR 3 +A+ ++E+V HDF+ FR Sbjct: 179 QALYEMELVGHDFFLFR 195 [163][TOP] >UniRef100_B0MGZ9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MGZ9_9FIRM Length = 176 Score = 74.3 bits (181), Expect = 7e-12 Identities = 49/180 (27%), Positives = 98/180 (54%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 + II G+N+E+++ ++ +E+K+GR+ YL ++D+ ++ E ++ E Sbjct: 1 MNFIISGKNIEVTEGIRAAIEEKLGRL---DKYLTDDIDIIVTLSVQKE------RQKIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K H ++RAE+ + Y SIDLV I++R++R+ K + K+ Sbjct: 52 VTIPMKGH-IIRAEQDSADMYVSIDLVIDILERQIRRYKTRLMSK----------KYEGA 100 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 L D+++++ DE+E+ ++R+K F + P+ V EA Q++++ H+F+ FR Sbjct: 101 GLKQEFIDKDEDV-------DEDEI--RIIRSKKFAIKPMDVEEACIQMDLLGHNFFVFR 151 [164][TOP] >UniRef100_A7BEC8 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEC8_9ACTO Length = 214 Score = 74.3 bits (181), Expect = 7e-12 Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 18/195 (9%) Frame = -1 Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR----TRR 369 + + RN E+ +++VE+KV ++ Q + R VDV L+ R PR R Sbjct: 3 ITVVARNAEIHPNFREYVEEKVSKITQFYPRAQR-VDVELTHE------RNPRQADTAER 55 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 E+T+Y K ++RAE + Y ++D+ + + +LR+++++ DH R P L + Sbjct: 56 IELTVYGKGP-IIRAEAQSADRYAAVDIAAGKLYERLRRLRDRVKDHRRRY--PRDLAEA 112 Query: 188 EVI--------------LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFE 51 E++ P P ED +++ ++++ +VR K + PP++V E Sbjct: 113 EILEAPVVEETATFEPEAPKPLRSAED-LKVGEAREEQWGDTPIIVRQKVHEAPPMSVDE 171 Query: 50 AIDQLEMVDHDFYAF 6 A+DQ+ MV H F+ F Sbjct: 172 ALDQMMMVGHPFFLF 186 [165][TOP] >UniRef100_A4ECY7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECY7_9ACTN Length = 194 Score = 74.3 bits (181), Expect = 7e-12 Identities = 53/175 (30%), Positives = 82/175 (46%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 + GR ++DA++ HV++K+G ++ VDV L P EVT Sbjct: 5 VSGRKTTVTDALRAHVDEKIGEALKVFDIEPMTVDVVLRYEKNPS---NPNPAIVEVTAR 61 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 R V+R EH Y +IDL + + R+LRK K K D NR + Sbjct: 62 A-RGSVIRVAEHGADMYAAIDLSADKVTRQLRKFKTKVVD--------NRQGGASAADVA 112 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 P E ED ++ ++D++ L VR K D+ P+T +A+ Q +++ HDFY F Sbjct: 113 PVERVEDLADLLLPEEDDDLL----VREKVIDVTPMTEEQALVQTDLLGHDFYVF 163 [166][TOP] >UniRef100_C0Z6T8 Putative uncharacterized protein yvyD n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6T8_BREBN Length = 185 Score = 73.9 bits (180), Expect = 9e-12 Identities = 52/180 (28%), Positives = 96/180 (53%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N++++ A++++VE KVGR ++K+ + +V+++ RG T Sbjct: 1 MKFNIRGENIQVTAALREYVEKKVGR-LEKYFETPQPTEVQVTMH----VHRGEGTIEVT 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 + L ++RAEE E Y +IDLV ++R++RK K K R + R+ Sbjct: 56 IPLSGV---IIRAEETHEDMYAAIDLVVEKLERQIRKHKTKLMRKLR-VDSTGRI----- 106 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 ++ E + + DEE++ ++VRTK FD+ P+ EA+ Q++M+ H F+ F+ Sbjct: 107 -----AQRESQPVAVMIPDVDEEDIDIDIVRTKRFDLKPMDAQEAVMQMDMLGHSFFVFQ 161 [167][TOP] >UniRef100_A5UVY5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UVY5_ROSS1 Length = 193 Score = 73.9 bits (180), Expect = 9e-12 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 1/179 (0%) Frame = -1 Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT 357 LI++ RN ++S+ +QH+E K+ R+ + YL R V + G R +VT Sbjct: 3 LIVKSRNGKISERQRQHIEQKLSRLDR---YLDRIAQVTVEHMEEMRRNEG-NVHRVQVT 58 Query: 356 LYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL 177 + +VRAE A Y +ID V +QR++ + K+K H R +G R + +++ Sbjct: 59 VVGDHGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDK---HWR--RGKLRRQGGQIVE 113 Query: 176 PLPSEDEEDEIEITPQKD-DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 LP E+ D EEE +VRTK F + P+ EA++Q+E++ H+F+ F+ Sbjct: 114 ALP------ELAAPSLADTQEEEERPRIVRTKEFQVKPMYSDEAVEQMELLGHNFFIFQ 166 [168][TOP] >UniRef100_C4FCG3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCG3_9ACTN Length = 194 Score = 73.9 bits (180), Expect = 9e-12 Identities = 51/179 (28%), Positives = 88/179 (49%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +++ + GR ++DA++ HV++K+G ++ DV L P E Sbjct: 1 MEIKVSGRKTTVTDALRAHVDEKIGEALKVFDIEPMTADVVLRYEKNPS---NPNPAIVE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ R V+R EH Y +IDL + + R+LRK K + D+ + L +EV Sbjct: 58 VTVRA-RGSVIRVAEHGADMYAAIDLAAEKVTRQLRKFKTRVVDNRQQ-----GLSAAEV 111 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 P E D ++ +D++++L VR K ++ P+T EA+ Q +++ HDFY F Sbjct: 112 A---PVEPVADLADLLLPEDEDDQL----VRVKEVELTPMTDEEALVQTDLIGHDFYVF 163 [169][TOP] >UniRef100_B7IPV2 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group RepID=B7IPV2_BACC2 Length = 180 Score = 73.9 bits (180), Expect = 9e-12 Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVMDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 [170][TOP] >UniRef100_A5Z528 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z528_9FIRM Length = 179 Score = 73.9 bits (180), Expect = 9e-12 Identities = 53/179 (29%), Positives = 95/179 (53%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K+ I G+N+E+++ ++ VE+K+G+ + K+ VDV LS ++ E Sbjct: 1 MKIKIFGKNIEVTEGIRSAVEEKIGK-LDKYFAEETRVDVTLSVN--------KNEQKVE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K ++RAEE ++ Y SID+V I+R+L K K K D + +K F+E Sbjct: 52 VTIPVKGR-IIRAEEISDDMYVSIDMVEETIERQLVKYKNKIIDKKKSIKE----AFTET 106 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + EDE DE+++ ++ +TK F + P+ EA ++E++ H+F+ F Sbjct: 107 YIEADYEDE-----------DEDQI--KIKKTKRFGIKPMDPEEACVEMELLGHNFFVF 152 [171][TOP] >UniRef100_Q49VV1 Uncharacterized protein SSP1964 n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Y1964_STAS1 Length = 190 Score = 73.9 bits (180), Expect = 9e-12 Identities = 49/180 (27%), Positives = 94/180 (52%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366 ++ I G N+ ++DA++ ++E+K+G++ + + + V++ T + Sbjct: 2 IRFEIHGENLTITDAIRNYIEEKIGKLERYFNDVPNATAHVKVKTYQNS-------ATKI 54 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 EVT+ K+ +RAEE + Y IDL+++ ++R++RK K + R+ +G E Sbjct: 55 EVTIPLKKV-TLRAEERNDDLYAGIDLINNKLERQVRKYKTRVNRRNRN-RGEQ-----E 107 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 LP E E EI+ + D E E++R K F + P+ EA+ Q++++ HDF+ F Sbjct: 108 AFASLPEEKEAVEIQNDENEADNEI---EIIRAKNFSLKPMDSEEAVLQMDLLGHDFFIF 164 [172][TOP] >UniRef100_Q5WDF7 Ribosomal protein S30EA n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDF7_BACSK Length = 184 Score = 73.6 bits (179), Expect = 1e-11 Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 1/176 (0%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRCEVTL 354 I+G N+E++ A+++++E KVG++ + +V+V+L G GE EVT+ Sbjct: 5 IRGENIEVTPAIREYIEKKVGKLERYFDTTPTADVNVKLQVLGSGESS-------IEVTI 57 Query: 353 YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP 174 + ++R EE Y +ID+V ++R++RK K K R +G + F + P Sbjct: 58 PMPKL-LLRGEEINADMYAAIDIVVEKLERQIRKYKTKVNRKFRQ-EGSLKYMFKNELEP 115 Query: 173 LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 L E ED+ EL EVVRTK F++ P+ EAI Q++++ H+F+ F Sbjct: 116 LRDEVAEDD-----------EL--EVVRTKRFNLKPMDAEEAILQMDLLGHNFFVF 158 [173][TOP] >UniRef100_B7GL70 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GL70_ANOFW Length = 182 Score = 73.6 bits (179), Expect = 1e-11 Identities = 54/179 (30%), Positives = 93/179 (51%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A++++VE K+G+ ++++ V V ++ + + + + E Sbjct: 1 MKYNIRGENIEVTQAIREYVEKKIGK-LERYFESTEGVTVHVNLKVYND-----KQAKIE 54 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ + V+RAEE + Y +IDLV ++R++RK K K R K N + + Sbjct: 55 VTIPMPQI-VLRAEERHDDMYAAIDLVVDKLERQIRKHKTKVNRKMRE-KEANGVTLTAT 112 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + E EE+E E VVRTK F + P+ EAI Q+ M+ H+FY F Sbjct: 113 VPVATEEHEEEEFE--------------VVRTKRFSLKPMDSEEAILQMNMLGHNFYVF 157 [174][TOP] >UniRef100_B5UPY3 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group RepID=B5UPY3_BACCE Length = 180 Score = 73.6 bits (179), Expect = 1e-11 Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 [175][TOP] >UniRef100_C7G8P2 Ribosomal subunit interface protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8P2_9FIRM Length = 176 Score = 73.2 bits (178), Expect = 2e-11 Identities = 51/179 (28%), Positives = 91/179 (50%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +++ I GRN+EL+D +K VEDK+ ++ Y + DV ++ E ++ E Sbjct: 1 MRIKITGRNIELTDGIKDAVEDKLNKL---EKYFTPDTDVYVTLSVEKE------RQKVE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K + +R+E+ + Y SIDLV +I+R+L+K + K + + F + Sbjct: 52 VTIPMKGN-YIRSEQVSNDMYVSIDLVEEVIERQLKKYRTKLVTKQQSAASVFKQDFLDA 110 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 DD+EE+ +++R+K FDM P+ +A Q+E++ HDF+ F Sbjct: 111 A-----------------SDDDEEI--KIIRSKKFDMKPMYPEDACVQMELLGHDFFVF 150 [176][TOP] >UniRef100_C2U573 Ribosome-associated factor Y n=3 Tax=Bacillus cereus RepID=C2U573_BACCE Length = 180 Score = 73.2 bits (178), Expect = 2e-11 Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 [177][TOP] >UniRef100_B7HEI9 Ribosomal subunit interface protein n=9 Tax=Bacillus cereus group RepID=B7HEI9_BACC4 Length = 180 Score = 73.2 bits (178), Expect = 2e-11 Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF-- 106 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 [178][TOP] >UniRef100_A8W0Z3 Maf protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W0Z3_9BACI Length = 197 Score = 73.2 bits (178), Expect = 2e-11 Identities = 55/180 (30%), Positives = 94/180 (52%) Frame = -1 Query: 545 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 366 S+ I+G N+E++ A++ +VE KVG+ ++K+ DV + + ++ Sbjct: 14 SMNFNIRGENLEITPALRDYVEKKVGK-LEKYFETTPSSDVHV------KMSVVNTDQKV 66 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 E+T+ + ++RAEE Y ++DLV ++R++RK K K R +G + LK+ Sbjct: 67 EITIPMPKL-LLRAEEKHADMYAAVDLVIEKLERQIRKHKTKVN---RKFRGEDSLKYM- 121 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +E E E TP D E+VRTK FD+ P+ EAI Q++M+ H+F+ F Sbjct: 122 ----FKNELEPISEEETPDDD------YEIVRTKRFDLKPMDAEEAILQMDMLGHNFFVF 171 [179][TOP] >UniRef100_C3AT15 Ribosome-associated factor Y n=3 Tax=Bacillus RepID=C3AT15_BACMY Length = 180 Score = 72.8 bits (177), Expect = 2e-11 Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ EV V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEVKVNLKVYSDKQ--------RVE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV ++R++RK K K R P + Sbjct: 52 VTIPFTDL--LLRAEETHSDMYAAIDLVVDKVERQIRKHKTKVNRKLREKGSPK----TA 105 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 IL P+ E+ K+DE EL VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 106 FILTEPAATLEEV------KEDELEL----VRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 [180][TOP] >UniRef100_B7HX18 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group RepID=B7HX18_BACC7 Length = 180 Score = 72.8 bits (177), Expect = 2e-11 Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV ++R++RK K K R KG + F Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDEVEEDQLELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 [181][TOP] >UniRef100_Q72XS8 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group RepID=Q72XS8_BACC1 Length = 180 Score = 72.8 bits (177), Expect = 2e-11 Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV ++R++RK K K R KG + F Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ILP E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 [182][TOP] >UniRef100_B4VG26 Ribosomal subunit interface protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4VG26_9ACTO Length = 250 Score = 72.8 bits (177), Expect = 2e-11 Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 18/214 (8%) Frame = -1 Query: 593 RRGAAS-ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVG-RVIQKHSYLVREVDVR 420 R+G AS + S+ G V ++++GR E+ + ++HV +K+ IQK V +DV Sbjct: 2 RKGDASPLGRSYPGTEFCVDIVVKGRKTEVPERFRKHVAEKLNPERIQKLDAKVISLDVE 61 Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240 +S + R+ R E+TL++ R V+RAE A Y ++DL ++ +LRK +K Sbjct: 62 VSKEHNPR--QADRSDRVEITLHS-RGPVIRAEAAAADAYAALDLAQDKLEARLRKQHDK 118 Query: 239 ETDHGRHMKGPNRLKFSEVILPLP------------SEDEEDEIEITP----QKDDEEEL 108 +G RL +EV +P +E++ D I T + E L Sbjct: 119 RYTR----RGNGRLSAAEVADVVPGVAQLNGNGQPFTEEQADAIPTTRIGSLEVQGEGPL 174 Query: 107 IEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 I VR K P+++ +A+ ++E+V HDFY F Sbjct: 175 I---VREKTHSAAPMSLDQALYEMELVGHDFYLF 205 [183][TOP] >UniRef100_A5ZRI8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRI8_9FIRM Length = 175 Score = 72.8 bits (177), Expect = 2e-11 Identities = 55/179 (30%), Positives = 91/179 (50%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K II G+N+ +S +K VEDK+G+ ++++ EV V LS ++ E Sbjct: 1 MKFIISGKNITVSQGLKTAVEDKLGK-LERYFTPDTEVVVTLSVE--------KERQKIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K + ++R+E+ + Y SIDLV +I+R+LRK K K D K F + Sbjct: 52 VTIPMKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVD-----KQQAAANFQKE 105 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 L KD EE+ +++RTK F + P+ +A Q+E++ H+F+ F Sbjct: 106 YL---------------DKDYEEDEEVKIIRTKKFGIKPMYPEDACVQMELLGHNFFVF 149 [184][TOP] >UniRef100_B1IAC2 Ribosome-associated protein Y n=15 Tax=Streptococcus pneumoniae RepID=B1IAC2_STRPI Length = 182 Score = 72.8 bits (177), Expect = 2e-11 Identities = 50/179 (27%), Positives = 99/179 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +V K+ + I+K+ +E+D R++ + E +T + E Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV+ I+R++RK K K ++ +L F++ Sbjct: 56 VTIPLGSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQL-FTDA 113 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ++ +D + +VVR+K D+ P+ + EAI Q++++ HDF+ + Sbjct: 114 LV-----------------EDSNVVQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFIY 155 [185][TOP] >UniRef100_UPI000196CE6C hypothetical protein CATMIT_02221 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CE6C Length = 193 Score = 72.4 bits (176), Expect = 3e-11 Identities = 48/180 (26%), Positives = 101/180 (56%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K+I++G+N+ ++DA++ + K+ ++ K+ + ++V+ ++ R P ++ E Sbjct: 16 MKVIVRGKNVTITDAIEDKITKKLA-LLDKYFIMGQDVEAKVLIR------TYPFGQKIE 68 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ T+ + ++RAEE ++ Y +IDLV ++R++RK K K + ++ N+L F+ Sbjct: 69 VTIPTE-YVLLRAEETSDDLYEAIDLVIDKLERQIRKYKTKLSRKSKN----NKLAFNIN 123 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 L E EE+++ VV+TK + P+ + EAI Q+E++ H F+ ++ Sbjct: 124 TLEALEEPEEEDV---------------VVKTKTINPKPMDMEEAIMQMELIGHSFFVYK 168 [186][TOP] >UniRef100_C6D4V5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D4V5_PAESJ Length = 182 Score = 72.4 bits (176), Expect = 3e-11 Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 3/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K II+G +++++A++++ K+ R+ + E V LS G E Sbjct: 1 MKYIIRGHRIQVTEALREYAVKKISRLEKYFEAPASETTVTLSVTKG--------KHAVE 52 Query: 362 VTLYTKRHGVV-RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ GV+ RAE+ +E Y SID+V ++R++RK K K RH G L F E Sbjct: 53 VTIPLV--GVMLRAEDKSEDMYSSIDVVVDKLERQIRKHKTKMNRKFRHESGVKAL-FKE 109 Query: 185 VI--LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 + + DEEDE+E+ VRTK F + P+ V EAI Q+ MV H+F+ Sbjct: 110 GLSQTAVSVMDEEDELEL--------------VRTKRFMLKPMDVEEAILQMNMVGHNFF 155 Query: 11 AF 6 F Sbjct: 156 VF 157 [187][TOP] >UniRef100_B5E3V2 Ribosomal subunit interface protein n=1 Tax=Streptococcus pneumoniae G54 RepID=B5E3V2_STRP4 Length = 182 Score = 72.4 bits (176), Expect = 3e-11 Identities = 50/179 (27%), Positives = 99/179 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +V K+ + I+K+ +E+D R++ + E +T + E Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV+ I+R++RK K K ++ +L F++ Sbjct: 56 VTIPLGSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQL-FTDA 113 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ++ +D + +VVR+K D+ P+ + EAI Q++++ HDF+ + Sbjct: 114 LV-----------------EDSNIVQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFXY 155 [188][TOP] >UniRef100_A9AY42 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AY42_HERA2 Length = 186 Score = 72.4 bits (176), Expect = 3e-11 Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 4/180 (2%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVRE--VDVRLST-RGGGEFGRGPRTRRCEV 360 I+ RN++L DA K +++K+G+ ++++ + + V+ R T RG GE T + Sbjct: 5 IKSRNIKLHDAQKAFIQEKLGK-LERYLDGINDWKVECRFETLRGSGE------TYTVQA 57 Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180 TL ++RAEE Y +++ V +QR++R+ KEK + +G R E+I Sbjct: 58 TLLADHGIILRAEERDRELYAAVEAVHDNLQRQIRRFKEKH-----YRRGKLRRTAGEII 112 Query: 179 L-PLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 PLP+ E D E+ +++R K + P+ EAI+Q+E++ H F+ FR Sbjct: 113 AAPLPALPE----------DAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFVFR 162 [189][TOP] >UniRef100_C9L411 Ribosomal subunit interface protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L411_RUMHA Length = 176 Score = 72.4 bits (176), Expect = 3e-11 Identities = 55/179 (30%), Positives = 93/179 (51%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K II G+N+E++ ++ VEDK+G+ ++K+ E+ V LS ++ E Sbjct: 1 MKFIISGKNIEVTQGLRSAVEDKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K + ++R+E+ + Y SIDLV II+R+LRK K K D + + +F E Sbjct: 52 VTIPVKGN-IIRSEQVSSDMYVSIDLVEEIIERQLRKYKNKIID--KKQSAGFQPEFVE- 107 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + EED EI +++RTK F P+ +A Q+E++ H+F+ F Sbjct: 108 -----KDYEEDTNEI------------KIIRTKKFGFKPMYPEDACVQMELLGHNFFVF 149 [190][TOP] >UniRef100_B6G8G1 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G8G1_9ACTN Length = 194 Score = 72.4 bits (176), Expect = 3e-11 Identities = 50/179 (27%), Positives = 88/179 (49%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +++ + GR ++DA++ HV++K+G ++ DV L P E Sbjct: 1 MEIKVSGRKTTVTDALRAHVDEKIGEALKVFDIEPMTADVVLRYEKNPS---NPNPAIVE 57 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ R V+R EH Y +IDL + + R+LRK K + D+ + L +EV Sbjct: 58 VTVRA-RGSVIRVAEHGADMYAAIDLAADKVTRQLRKFKTRVVDNRQQ-----GLSAAEV 111 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 P D D + P+++D++ +VR K ++ P+T +A+ Q +++ HDFY F Sbjct: 112 APVEPVADLADLL--IPEEEDDQ-----LVRVKEIELTPMTEEQALVQTDLLGHDFYVF 163 [191][TOP] >UniRef100_C1CNI0 Ribosome-associated protein Y n=9 Tax=Streptococcus pneumoniae RepID=C1CNI0_STRZP Length = 182 Score = 72.4 bits (176), Expect = 3e-11 Identities = 50/179 (27%), Positives = 99/179 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +V K+ + I+K+ +E+D R++ + E +T + E Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV+ I+R++RK K K ++ +L F++ Sbjct: 56 VTIPLGSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQL-FTDA 113 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ++ +D + +VVR+K D+ P+ + EAI Q++++ HDF+ + Sbjct: 114 LV-----------------EDSNIVQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFIY 155 [192][TOP] >UniRef100_C1CBI3 Ribosome-associated protein Y n=1 Tax=Streptococcus pneumoniae 70585 RepID=C1CBI3_STRP7 Length = 182 Score = 72.0 bits (175), Expect = 4e-11 Identities = 50/179 (27%), Positives = 98/179 (54%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +V K+ + I+K+ +E+D R++ + E +T + E Sbjct: 2 IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ ++ YGSIDLV+ I+R++RK K K ++ +L F++ Sbjct: 56 VTIPLGSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQL-FTDA 113 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ++ +D + +VVR K D+ P+ + EAI Q++++ HDF+ + Sbjct: 114 LV-----------------EDSNVVQSKVVRLKQIDLKPMDLEEAILQMDLLGHDFFIY 155 [193][TOP] >UniRef100_B5XMH0 Ribosomal subunit interface protein n=1 Tax=Streptococcus pyogenes NZ131 RepID=B5XMH0_STRPZ Length = 182 Score = 71.6 bits (174), Expect = 5e-11 Identities = 56/179 (31%), Positives = 97/179 (54%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E R+ + E Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAE+ + YGSI LV I+R++RK K K R K P F+ Sbjct: 56 VTIPLDSV-TLRAEDVSXDMYGSIXLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-- 111 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +E E +E++ P+ +VVRTK + P+ V EA Q+E++ HDF+ + Sbjct: 112 -----TEFEAEEVDEIPEV--------QVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157 [194][TOP] >UniRef100_A8M3Q2 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Salinispora arenicola CNS-205 RepID=A8M3Q2_SALAI Length = 208 Score = 71.6 bits (174), Expect = 5e-11 Identities = 50/189 (26%), Positives = 96/189 (50%), Gaps = 11/189 (5%) Frame = -1 Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT----RR 369 ++++GRN+E+ D + HV +K+ + I+++ + V VDV L R PR +R Sbjct: 3 IVVKGRNVEVPDHYRVHVAEKLAK-IERYDHKVIRVDVELFHE------RNPRQSDHCQR 55 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMK-----GP 207 E+T ++ R V+RAE Y ++D + + ++R+ ++ HGRH Sbjct: 56 VEITCFS-RGPVMRAEACTSDFYSALDAAIARLDTRMRRAADRRRVHHGRHAPISVAAAT 114 Query: 206 NRLKFSEVIL-PLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 30 RL ++++ PL + + +++ ++ + R K P+TV +A+ Q+E+ Sbjct: 115 ARLPVTDLVAAPLSHDGATATVAAERPEEERDDQPWHIAREKVHPAEPMTVDDALFQMEL 174 Query: 29 VDHDFYAFR 3 V HDFY F+ Sbjct: 175 VGHDFYLFQ 183 [195][TOP] >UniRef100_C8P6S3 Ribosomal subunit interface protein n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P6S3_9LACO Length = 179 Score = 71.6 bits (174), Expect = 5e-11 Identities = 53/180 (29%), Positives = 94/180 (52%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++DA++ +V ++ + +QK E ++ + RT + E Sbjct: 2 LKFNIRGENVEVTDAIRDYVVKRISK-LQKFFEDSVEATAHVNLKVYPN-----RTYKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ + +RAEE + YGS+DLV+ ++R++RK K K R KG L+F Sbjct: 56 VTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF--- 110 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 +PS+D+ E+ ++VRTK + P+ EA+ Q++M+ HDF+ F+ Sbjct: 111 ---VPSDDDAASDEL------------KIVRTKQVSLKPMDPEEAVLQMDMLGHDFFVFQ 155 [196][TOP] >UniRef100_A9VQA3 Sigma 54 modulation protein/ribosomal protein S30EA n=2 Tax=Bacillus cereus group RepID=A9VQA3_BACWK Length = 180 Score = 71.6 bits (174), Expect = 5e-11 Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155 [197][TOP] >UniRef100_C2ETD9 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus vaginalis ATCC 49540 RepID=C2ETD9_9LACO Length = 189 Score = 71.6 bits (174), Expect = 5e-11 Identities = 51/188 (27%), Positives = 100/188 (53%), Gaps = 3/188 (1%) Frame = -1 Query: 557 GPLSSVKLIIQGRNMELSDAVKQHVEDKVGRV---IQKHSYLVREVDVRLSTRGGGEFGR 387 G ++ +K I+G N+E++D+++ +V ++ ++ + + V++++ Sbjct: 6 GEITMLKFNIRGENIEVTDSIRDYVVKRINKLQKFFEDNVEATAHVNLKVYPN------- 58 Query: 386 GPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP 207 RT + EVT+ + +RAEE + YGS+DLV+ ++R++RK K K R KG Sbjct: 59 --RTYKVEVTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGF 114 Query: 206 NRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMV 27 L+F +P++D+ + +DD ++VRTK + P+ EA+ Q++M+ Sbjct: 115 KSLEF------VPTDDDAE------SQDD-----LKIVRTKQISLKPMDPEEAVLQMDML 157 Query: 26 DHDFYAFR 3 HDF+ F+ Sbjct: 158 GHDFFVFQ 165 [198][TOP] >UniRef100_C0GF81 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF81_9FIRM Length = 177 Score = 71.6 bits (174), Expect = 5e-11 Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 3/182 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +KLI++G+N+E+++A++++V ++G+ I K+ + E V L+ G R E Sbjct: 1 MKLILRGKNIEVTNALEEYVNKRIGK-IDKYFDVDTEAQVTLTVEHG--------MHRVE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIK---EKETDHGRHMKGPNRLKF 192 VT + ++RAEE Y SID V ++R++ K K ++ G +K N L Sbjct: 52 VTAAIEGM-ILRAEESTGDMYASIDSVVDKLERQIAKYKTRINRKARQGGGIKAMNEL-- 108 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 PQ +DEEE +VV+TK F + P+ V EAI Q+ ++ HDF+ Sbjct: 109 -------------------PQVEDEEE-DWDVVKTKRFVVKPMPVEEAILQMNLLGHDFF 148 Query: 11 AF 6 F Sbjct: 149 VF 150 [199][TOP] >UniRef100_B7GE66 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GE66_PHATR Length = 209 Score = 71.6 bits (174), Expect = 5e-11 Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 8/190 (4%) Frame = -1 Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQK--HSYLVREVDVRLSTRGGGEFGRGPRT 375 + V +II G+N+EL+ A+ +HV ++G I K + ++E DV LS + G Sbjct: 9 TEVPVIINGQNIELTPALVEHVNKRIGGQINKLASNGAIQECDVILSVSKNPKVKNG--- 65 Query: 374 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNR 201 R EV K ++ E + Y SID S + RKL K K+ HG G + Sbjct: 66 HRVEVVTNLKGTSIICHNESPDM-YASIDAASHALYRKLCKYKDNRVAGWHGGEKMGNDI 124 Query: 200 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEE---VVRTKYFDMP-PLTVFEAIDQLE 33 + EV+ E+ ED E T EE + E + + K FD+ P++V EA+ L+ Sbjct: 125 M---EVL-----ENLEDVSEYTATPVAEEYVDPEAPTITKVKNFDLTKPMSVQEAVFALD 176 Query: 32 MVDHDFYAFR 3 +DHDFY FR Sbjct: 177 YIDHDFYVFR 186 [200][TOP] >UniRef100_Q1AVJ5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ5_RUBXD Length = 189 Score = 71.2 bits (173), Expect = 6e-11 Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 7/186 (3%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEF--GRGPRTRR 369 ++++++GRN+ ++D+++++ +KV RV + D R R E R P Sbjct: 1 MEIVVKGRNIPVTDSLERYAVEKVERVRKFFD------DDRSVARAEVELIHERNPSIAA 54 Query: 368 CEVTLYTK--RHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNR 201 EV T V++A E +E Y SID +S ++R++++ + ++ D HGR Sbjct: 55 SEVAETTLFINGAVLKAREASEDMYASIDRMSDKLERQVKRYRGRQVDRWHGR------- 107 Query: 200 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVD 24 LK E E P +EEE IE +VRTK F M P++ EA+ Q+E++D Sbjct: 108 LK----------NHEGARAEPQPFVAEEEEDIEPRIVRTKQFQMKPMSAEEAVLQMELLD 157 Query: 23 HDFYAF 6 HDF+ F Sbjct: 158 HDFFVF 163 [201][TOP] >UniRef100_C5QVF5 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QVF5_STAEP Length = 189 Score = 71.2 bits (173), Expect = 6e-11 Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 2/181 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366 ++ I G N+ ++DA++ ++E+KVG++ + + + V VR+ T T + Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKVGKLERYFNNVPNAVAHVRVKTYSNS-------TTKI 54 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 EVT+ K +RAEE + Y IDL+++ ++R++RK K + R +G + +E Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRVNRKHRD-RGDQDIFVAE 112 Query: 185 VILPLPSEDEEDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9 V E Q DD E E E++R+K F + P+ EA+ Q+ ++ HDF+ Sbjct: 113 V----------QESTANNQADDIESENDIEIIRSKQFSLKPMDSEEAVLQMNLLGHDFFI 162 Query: 8 F 6 F Sbjct: 163 F 163 [202][TOP] >UniRef100_C5QQC2 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus epidermidis M23864:W1 RepID=C5QQC2_STAEP Length = 191 Score = 71.2 bits (173), Expect = 6e-11 Identities = 46/180 (25%), Positives = 96/180 (53%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366 ++ I G N+ ++DA++ ++E+K+G++ + + + V V++ T + Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYSNS-------ATKI 54 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 EVT+ K +RAEE + Y IDL+++ ++R++RK K + R +G + +E Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRVNRKHRD-RGDQEVFVAE 112 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 V E +E+ + D++ ++ E++R+K F + P+ EA+ Q+ ++ HDF+ F Sbjct: 113 V-----QEATPEEVSGAEEPDNDSDI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIF 165 [203][TOP] >UniRef100_C9RVC1 Sigma 54 modulation protein/ribosomal protein S30EA n=2 Tax=Geobacillus RepID=C9RVC1_9BACI Length = 182 Score = 71.2 bits (173), Expect = 6e-11 Identities = 51/175 (29%), Positives = 97/175 (55%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 ++G N+E++ A++++VE K+G+ ++++ +V+V ++ + + G+G + EVT+ Sbjct: 5 VRGENIEVTPALREYVEKKIGK-LERYFDRTDDVNVHVNLKVYND-GQG----KIEVTIP 58 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 H ++RAEE E Y +IDLV+ ++R++RK K K R + +L I Sbjct: 59 IP-HLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKVNRKLRDREKEAKLAAPVSIGAS 117 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +E+EE+ E+VRTK+F + P+ EAI Q+ ++ H+F+ F Sbjct: 118 AAENEEEF---------------EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157 [204][TOP] >UniRef100_C2SSP0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus BDRD-ST196 RepID=C2SSP0_BACCE Length = 180 Score = 71.2 bits (173), Expect = 6e-11 Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155 [205][TOP] >UniRef100_C2Q3D0 Ribosome-associated factor Y n=2 Tax=Bacillus cereus RepID=C2Q3D0_BACCE Length = 180 Score = 71.2 bits (173), Expect = 6e-11 Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV I+R++RK K K R KG + F Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF-- 106 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155 [206][TOP] >UniRef100_C0CJV5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CJV5_9FIRM Length = 175 Score = 71.2 bits (173), Expect = 6e-11 Identities = 54/179 (30%), Positives = 94/179 (52%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 + II G+N+ ++D ++ VEDK+G+ ++++ E+ V LS + + E Sbjct: 1 MNFIISGKNLTVTDGLRTAVEDKLGK-LERYFTPDTEIIVTLSVEKSRQ--------KIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K + ++R+E+ + Y SIDLV +I+R+LRK K K D + G + F + Sbjct: 52 VTIPVKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKTKIVD--KEKAGDH---FQKA 105 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + E EEDE++I RTK FD+ P+ +A Q+E++ H+F+ F Sbjct: 106 FIEKEYE-EEDEVKIQ--------------RTKKFDIKPMYPEDACVQMELLGHNFFVF 149 [207][TOP] >UniRef100_A0RKX8 Sigma 54 modulation protein / SSU ribosomal protein S30P n=26 Tax=Bacillus cereus group RepID=A0RKX8_BACAH Length = 180 Score = 71.2 bits (173), Expect = 6e-11 Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV ++R++RK K K R KG + F Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 [208][TOP] >UniRef100_A9BI17 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BI17_PETMO Length = 199 Score = 70.9 bits (172), Expect = 8e-11 Identities = 48/182 (26%), Positives = 96/182 (52%), Gaps = 9/182 (4%) Frame = -1 Query: 521 RNMELSDAVKQHVEDKVGR---VIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 + +EL++A++ ++E ++ + +++KH +V DVR++ G + E+T + Sbjct: 8 KEVELTEALENYIEKRMSKPDHLLKKHPDIVSPSDVRITKERG--------IYKVEITTH 59 Query: 350 TKRHG-VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK-----ETDHGRHMKGPNRLKFS 189 +++ EE + Y +ID V+ ++RK+RK+K + TD M+ L+ Sbjct: 60 INPLSKIIKVEERSNDLYEAIDEVTDSLERKIRKLKNRLQEQSRTDKKARMEIEQNLQNP 119 Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9 ++ +E+ E EIE P ++VRTK FD+ ++V EA+ Q++++ H F+ Sbjct: 120 DIKNLDLAEENESEIEEKPDAP-------KIVRTKNFDLTLMSVEEAMLQMQLLGHSFFV 172 Query: 8 FR 3 FR Sbjct: 173 FR 174 [209][TOP] >UniRef100_Q2B1U0 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B1U0_9BACI Length = 184 Score = 70.9 bits (172), Expect = 8e-11 Identities = 53/175 (30%), Positives = 93/175 (53%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 I+G N+E++ A++++VE K+ + ++K+ + +V ++ + + EVT+ Sbjct: 5 IRGENIEVTPAIREYVEKKIAK-LEKYFTETPDANVHVNLKTYNN-----NRSKVEVTI- 57 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 ++ V+RAEE E Y +IDL+ ++R++RK K K R KG L F+ Sbjct: 58 PMQNLVLRAEEDHEDMYAAIDLIVDKLERQIRKHKTKVNRKFRE-KGSPTLMFASF---- 112 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 DE E ++++ +L EVVR K FD+ P+ EAI Q+ ++ H FY F Sbjct: 113 ------DEPEAPVLEEEDNDL--EVVRQKSFDLKPMDNEEAILQMNLLGHSFYVF 159 [210][TOP] >UniRef100_C2ZFA1 Ribosome-associated factor Y n=2 Tax=Bacillus cereus RepID=C2ZFA1_BACCE Length = 180 Score = 70.9 bits (172), Expect = 8e-11 Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV ++R++RK K K R KG + F Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF-- 106 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 [211][TOP] >UniRef100_C2YZ14 Ribosome-associated factor Y n=1 Tax=Bacillus cereus AH1271 RepID=C2YZ14_BACCE Length = 180 Score = 70.9 bits (172), Expect = 8e-11 Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ E+ V L + R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV ++R++RK K K R KG + F Sbjct: 52 VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF-- 106 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ILP E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 [212][TOP] >UniRef100_C2WEE0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus Rock3-44 RepID=C2WEE0_BACCE Length = 180 Score = 70.9 bits (172), Expect = 8e-11 Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ E+ V L +R E Sbjct: 1 MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYS--------EKQRVE 51 Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 VT+ +T ++RAEE Y +IDLV I+R++RK K K R P Sbjct: 52 VTIPFTDL--LLRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLREKGSPKTTFILT 109 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 E +ED++E+ VRTK FD+ P+ V EAI Q++M+ H+F+ F Sbjct: 110 ESAATLEEVKEDDLEL--------------VRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155 [213][TOP] >UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CNW3_9FIRM Length = 186 Score = 70.9 bits (172), Expect = 8e-11 Identities = 54/179 (30%), Positives = 92/179 (51%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 + II G+N+E++ +K +E K+G+ ++++ E++V LS G + + E Sbjct: 1 MNFIISGKNIEVTPGLKDAIEQKLGK-LERYFTPETEINVTLSVEKGRQ--------KIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K + ++R+E+ ++ Y SIDLV +I+R+LRK K K R P S Sbjct: 52 VTIPVKGN-IIRSEQTSDNMYVSIDLVEEVIERQLRKYKNKLV--ARSQGHPT----SYT 104 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 E E E +DDE ++VRTK F + P+ +A Q+E++ H F+ F Sbjct: 105 STGNSFRKEFFETEDDAAEDDE----IQIVRTKKFGIKPMFPEDACIQMELLGHSFFVF 159 [214][TOP] >UniRef100_P47995 Uncharacterized protein Sca_0400 n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=Y400_STACT Length = 188 Score = 70.9 bits (172), Expect = 8e-11 Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 2/181 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 ++ I G N+ ++DA++ ++EDKVG+ ++++ V V+ + + + + E Sbjct: 2 IRFEIHGDNLTITDAIRNYIEDKVGK-LERYFTNVPNVNAHVKVKTYAN-----SSTKIE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ +RAEE + Y IDL+++ ++R++RK K + NR K E Sbjct: 56 VTI-PLNDVTLRAEERNDDLYAGIDLITNKLERQVRKYKTRV----------NRKKRKES 104 Query: 182 IL-PLPSEDEED-EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9 P P+ E E + KDDE E+I R+K F + P+ EA+ Q++++ HDF+ Sbjct: 105 EHEPFPATPETPPETAVDHDKDDEIEII----RSKQFSLKPMDSEEAVLQMDLLGHDFFI 160 Query: 8 F 6 F Sbjct: 161 F 161 [215][TOP] >UniRef100_Q1WSW6 Ribosome-associated factor Y n=1 Tax=Lactobacillus salivarius UCC118 RepID=Q1WSW6_LACS1 Length = 184 Score = 70.5 bits (171), Expect = 1e-10 Identities = 52/179 (29%), Positives = 94/179 (52%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K+ ++G N+E++ A++++VE ++ ++ + D ST +T + E Sbjct: 2 LKINVRGENIEVTGAIREYVEKRLAKL---EKFFDNTAD---STAHVNLKVYSDKTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ + V+RAEE + Y SIDLV+ ++R++RK K K R KG +F+ Sbjct: 56 VTIPLP-YLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKNFEFA-- 111 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 P DE++E+E + E+VRTK + P+ EA+ Q++M+ HDF+ + Sbjct: 112 ----PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGHDFFIY 157 [216][TOP] >UniRef100_C5D7S1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Geobacillus sp. WCH70 RepID=C5D7S1_GEOSW Length = 182 Score = 70.5 bits (171), Expect = 1e-10 Identities = 48/175 (27%), Positives = 99/175 (56%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 I+G N+E++ A++++VE K+G+ ++++ ++ V ++ + + + + EVT+ Sbjct: 5 IRGENIEVTPALREYVEKKIGK-LERYFENTEDIHVHVNLKVYND-----KQGKIEVTIP 58 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 + ++RAEE + Y +IDLV+ ++R++RK K K +L+ E L Sbjct: 59 MPQL-LLRAEERHDDMYAAIDLVADKLERQIRKHKTKVN---------RKLRNKETKQVL 108 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +++ +E +++EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F Sbjct: 109 VTQNNNPPVE----ENEEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157 [217][TOP] >UniRef100_C9YZK5 Putative uncharacterized protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YZK5_STRSC Length = 241 Score = 70.5 bits (171), Expect = 1e-10 Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 14/193 (7%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVG-RVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 366 V ++++GR E+ + ++HV +K+ IQK V +DV +S + R+ R Sbjct: 12 VDIVVKGRKTEVPERFRKHVAEKLKLEKIQKLDGKVISLDVEVSKEPNPR--QADRSDRV 69 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 E+TL++ R V+RAE A Y ++DL + ++ +LRK +K +G RL +E Sbjct: 70 EITLHS-RGPVIRAEAAASDPYAALDLAADKLEARLRKQHDKRYTR----RGARRLTAAE 124 Query: 185 VILPLPS----------EDEEDEIEITPQKDDEEELIEE---VVRTKYFDMPPLTVFEAI 45 V +P DEE + +K E+ E +VR K P+T+ +A+ Sbjct: 125 VADHVPGVATLNGNGYVADEEKAEGVPTKKIGSLEVKGEGPLIVREKTHVASPMTLDQAL 184 Query: 44 DQLEMVDHDFYAF 6 ++E+V HDFY F Sbjct: 185 YEMELVGHDFYLF 197 [218][TOP] >UniRef100_C4W9L5 Ribosomal subunit interface protein n=1 Tax=Staphylococcus warneri L37603 RepID=C4W9L5_STAWA Length = 191 Score = 70.5 bits (171), Expect = 1e-10 Identities = 47/180 (26%), Positives = 95/180 (52%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366 ++ I G N+ ++DA++ ++E+K+G++ + + + V V++ T T + Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYSNS-------TTKV 54 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 EVT+ K +RAEE + Y +DL+++ ++R++RK K + R +G + +E Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGVDLITNKLERQVRKYKTRVNRKHRD-RGDQEVFVAE 112 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 V E +EI + +D + E++R+K F + P+ EA+ Q+ ++ HDF+ F Sbjct: 113 V-----QEAPPEEISGAEENNDNDI---EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIF 164 [219][TOP] >UniRef100_C2KSB4 Ribosome-associated inhibitor protein Y n=1 Tax=Mobiluncus mulieris ATCC 35243 RepID=C2KSB4_9ACTO Length = 209 Score = 70.5 bits (171), Expect = 1e-10 Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 15/194 (7%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR----T 375 +++ ++ RN E+ +++VE+K+ +V Q R VDV L+ R PR Sbjct: 1 MEITLKARNAEIHPNFREYVEEKIAKVEQLAPRTQR-VDVELTHE------RNPRQVDTA 53 Query: 374 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN--- 204 R E+T++ K VVRAE + Y ++D+ + + +LR+ +++ +H R+ P+ Sbjct: 54 ERIEITVHGKGP-VVRAEASSSDRYAAVDIAAGKLYERLRRARDRIKNHRRYDIPPDVDL 112 Query: 203 -------RLKFSEVILPL-PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEA 48 + K + V PL P E ED++ +P +VR K + P++V EA Sbjct: 113 DVAMPEPQAKPAPVRAPLKPGEVREDQLGDSPV----------IVREKLHETTPVSVEEA 162 Query: 47 IDQLEMVDHDFYAF 6 +D++E+V H FY F Sbjct: 163 LDEMELVGHPFYLF 176 [220][TOP] >UniRef100_C2EGB2 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EGB2_9LACO Length = 184 Score = 70.5 bits (171), Expect = 1e-10 Identities = 52/179 (29%), Positives = 94/179 (52%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K+ ++G N+E++ A++++VE ++ ++ + D ST +T + E Sbjct: 2 LKINVRGENIEVTGAIREYVEKRLAKL---EKFFDNTAD---STAHVNLKVYSDKTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ + V+RAEE + Y SIDLV+ ++R++RK K K R KG +F+ Sbjct: 56 VTIPLP-YLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKNFEFA-- 111 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 P DE++E+E + E+VRTK + P+ EA+ Q++M+ HDF+ + Sbjct: 112 ----PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGHDFFIY 157 [221][TOP] >UniRef100_C0W8H6 Ribosome-associated inhibitor protein Y n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8H6_9ACTO Length = 214 Score = 70.5 bits (171), Expect = 1e-10 Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 14/191 (7%) Frame = -1 Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR----TRR 369 + + GRN E+S ++ +VE+K +V ++ V+ V+V ++ R PR R Sbjct: 3 ITVVGRNAEISSRLRDYVEEKATKV-EQFDPRVQRVEVEVTHE------RNPRQADTAER 55 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 E+T+ +K ++RAE + + + D+ + +LR+ ++++ DH R+ + Sbjct: 56 AEITVISKGP-IIRAEASSSDRFAAFDIAMGKLTERLRRARDRKKDHRRYPVDVPEGTQA 114 Query: 188 EVILPLPSEDEEDE--IEITPQKDDEEELIEE--------VVRTKYFDMPPLTVFEAIDQ 39 L S E D+ IE +P+ E+ + E +VR K D P+TV EA+ Q Sbjct: 115 PAAEELRSLHETDDAPIEDSPKAPTEKGVAVESQLGDSPVIVRQKLHDATPMTVDEALYQ 174 Query: 38 LEMVDHDFYAF 6 +E+V H FY F Sbjct: 175 MELVGHPFYLF 185 [222][TOP] >UniRef100_Q9K6W6 Ribosomal protein S30AE family n=1 Tax=Bacillus halodurans RepID=Q9K6W6_BACHD Length = 187 Score = 70.1 bits (170), Expect = 1e-10 Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 1/176 (0%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRCEVTL 354 ++G N+E++ A++++VE KVG++ + V +V+VR+ EVT+ Sbjct: 5 VRGENLEVTPALREYVEKKVGKLERYFDTTPVADVNVRMQVLNNLHI--------IEVTI 56 Query: 353 YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP 174 R ++RAEE Y +IDLV ++R++RK K K R +G + F + P Sbjct: 57 PMSRL-LLRAEEKHSDMYAAIDLVIEKLERQIRKHKTKVNRKFRQ-EGSLKYMFKNDLEP 114 Query: 173 LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + EE +E +E++L +VVR K F++ P+ EAI Q++M+ H+F+ F Sbjct: 115 MDGMREEILLE------EEDDL--QVVRKKRFNLKPMDTEEAILQMDMLGHNFFVF 162 [223][TOP] >UniRef100_C7XW84 Sigma 54 modulation protein/SSU ribosomal protein S30P n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XW84_9LACO Length = 179 Score = 70.1 bits (170), Expect = 1e-10 Identities = 53/180 (29%), Positives = 91/180 (50%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N++L+DA++ +VE ++ ++ + +L VD +T +T + E Sbjct: 2 LKFNIRGENVDLTDAIRDYVEKRISKI---NKFLEDNVD---ATAHVNLKVYKNKTFKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ + +RAEE + Y SIDLV+ ++R++RK K K R KG L+F Sbjct: 56 VTIPLP-YLTLRAEETSNDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF--- 110 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 P D E+ ++VRTK + P+ EA+ Q++M+ HDF+ F+ Sbjct: 111 ---------------VPGDDGTEDDSLKIVRTKEISLKPMDSEEAVLQMDMLGHDFFIFQ 155 [224][TOP] >UniRef100_C7ME61 SSU ribosomal protein S30P/sigma 54 modulation protein n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7ME61_BRAFD Length = 219 Score = 70.1 bits (170), Expect = 1e-10 Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 17/196 (8%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR----T 375 +++ + GR+M++ D ++H+ DK+ +V Q +R VDV +S + PR + Sbjct: 1 MEINVVGRHMDVPDRFRRHLTDKLDKVTQLAPAALR-VDVEISQE------KNPRQAELS 53 Query: 374 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR------HMK 213 R E+T++ + V+R+E A+ YG++D+ + +LR+ +++ DH R K Sbjct: 54 DRVELTVH-ENGTVIRSEARADDLYGALDVAYGKLLERLRRARDRRKDHRRGRDRSHQGK 112 Query: 212 GPN-RLKFSEVILPLPSED------EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 54 G + R ++ LP P +D E E T + D E V+R K P++V Sbjct: 113 GASLRTMPADQELPAPLQDLPPEPAEPAETPQTAETDLAEAGSPVVIREKKHPAKPMSVD 172 Query: 53 EAIDQLEMVDHDFYAF 6 +A+ +E+V HDF+ F Sbjct: 173 DALYHMELVGHDFFLF 188 [225][TOP] >UniRef100_B2GAI6 Ribosomal subunit interface protein n=3 Tax=Lactobacillus fermentum RepID=B2GAI6_LACF3 Length = 181 Score = 70.1 bits (170), Expect = 1e-10 Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 3/183 (1%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVG---RVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 372 +K I+G N+E++DA++ +V ++ R ++ + V++++ + RT Sbjct: 2 LKFNIRGENVEVTDAIRDYVVKRISKLERFLEPNVEANAHVNLKVYSN---------RTY 52 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192 + EVT+ + +RAEE + YGS+DLV+ ++R++RK K K R KG L+F Sbjct: 53 KVEVTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGYKNLEF 110 Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12 + PSE+ E + ++VRTK + P+ EA+ Q++M+ HDF+ Sbjct: 111 VDT----PSEEVEASDSL------------KIVRTKQIPLKPMDSEEAVLQMDMLGHDFF 154 Query: 11 AFR 3 ++ Sbjct: 155 VYQ 157 [226][TOP] >UniRef100_C0FKQ0 Putative uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=C0FKQ0_9CLOT Length = 175 Score = 70.1 bits (170), Expect = 1e-10 Identities = 55/179 (30%), Positives = 91/179 (50%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 ++ I GRN++++ +++ V +K+G+ ++++ E + LS + + E Sbjct: 1 MRYTITGRNIDVTPGLREAVIEKIGK-LERYFNQDTEAIITLSVTKDRQ--------KIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K H ++RAEE + Y SIDLV II+R+L+K K K D K + FSE+ Sbjct: 52 VTIPVKGH-IIRAEEQSTDMYVSIDLVEEIIERQLKKYKRKLID-----KKQAPVDFSEL 105 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + SE +DEI+I + K F M P+ EA Q+E++ H FY F Sbjct: 106 FVQEESE-PDDEIKIE--------------KVKKFAMKPMDPEEACVQMELLGHSFYVF 149 [227][TOP] >UniRef100_B6G1P8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1P8_9CLOT Length = 190 Score = 70.1 bits (170), Expect = 1e-10 Identities = 47/182 (25%), Positives = 94/182 (51%) Frame = -1 Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR 369 S +++ + G++++L+D +K + EDK+ ++ YL + +V+++ G ++ Sbjct: 7 SFMRVTVTGKHVKLTDGIKGYTEDKLKKL---GKYLDEDTEVKVTVSAG------KNRQK 57 Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189 EV + +R EE + Y +IDLV + R++ K K+K + G +++ Sbjct: 58 VEVMIPNVNGHTIRVEEEQDNLYPAIDLVCDKLSRQIIKYKDK---FKTRVPGNFSIRYE 114 Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9 + EE E+ + ++ E +IE R K F++ P+++ EAI Q+ + DHDFY Sbjct: 115 GI--------EELAQELDYEVEEPEVVIE---RRKKFNLKPMSIEEAILQMNLTDHDFYM 163 Query: 8 FR 3 F+ Sbjct: 164 FK 165 [228][TOP] >UniRef100_B4BN91 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Geobacillus sp. G11MC16 RepID=B4BN91_9BACI Length = 182 Score = 70.1 bits (170), Expect = 1e-10 Identities = 54/175 (30%), Positives = 100/175 (57%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 I+G N+E++ A++++VE K+G+ ++++ V V ++ + + G+G + EVT+ Sbjct: 5 IRGENIEVTPALREYVEKKIGK-LERYFDDTDHVHVNVNLKVYND-GQG----KIEVTIP 58 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 H ++RAEE + Y +IDLV+ ++R++RK K K + K +R K ++ P+ Sbjct: 59 IP-HLLLRAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVKLAAPV 112 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 P+ E +DEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F Sbjct: 113 PNGAAAAE-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157 [229][TOP] >UniRef100_Q00W70 Chloroplast-specific ribosomal protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00W70_OSTTA Length = 184 Score = 70.1 bits (170), Expect = 1e-10 Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 2/112 (1%) Frame = -1 Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQK-HSYLVREVDVRLSTRGGGEFGRGPRTR 372 + VK+++QG ++E++ A+ ++V K+GR S +REVDVR S RGG E +G Sbjct: 48 TDVKMLVQGLHLEITPAIDEYVRSKIGRACSHVDSRDIREVDVRCSARGG-EGSKGGVEH 106 Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RH 219 + EVT+ R + A+ E Y +ID + I+ R +RK KEK G RH Sbjct: 107 KTEVTVLMTRGPTLHADGVGENLYATIDQCADIVTRSIRKHKEKHGGKGARH 158 [230][TOP] >UniRef100_Q5HHR8 Uncharacterized protein SACOL0815 n=1 Tax=Staphylococcus aureus subsp. aureus COL RepID=Y815_STAAC Length = 190 Score = 70.1 bits (170), Expect = 1e-10 Identities = 46/180 (25%), Positives = 95/180 (52%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366 ++ I G N+ ++DA++ ++E+K+G++ + + + V V++ T + Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNS-------ATKI 54 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 EVT+ K + +RAEE + Y IDL+++ ++R++RK K + R +G + +E Sbjct: 55 EVTIPLK-NVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD-RGDQEVFVAE 112 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + E E ++ D+ E+ E++R+K F + P+ EA+ Q+ ++ HDF+ F Sbjct: 113 L-------QEMQETQVDNDAYDDNEI--EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVF 163 [231][TOP] >UniRef100_Q2YSH7 Uncharacterized protein SAB0704 n=35 Tax=Staphylococcus aureus RepID=Y704_STAAB Length = 190 Score = 70.1 bits (170), Expect = 1e-10 Identities = 46/180 (25%), Positives = 95/180 (52%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366 ++ I G N+ ++DA++ ++E+K+G++ + + + V V++ T + Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNS-------ATKI 54 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 EVT+ K + +RAEE + Y IDL+++ ++R++RK K + R +G + +E Sbjct: 55 EVTIPLK-NVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD-RGDQEVFVAE 112 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + E E ++ D+ E+ E++R+K F + P+ EA+ Q+ ++ HDF+ F Sbjct: 113 L-------QEMQETQVDNDAYDDNEI--EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVF 163 [232][TOP] >UniRef100_Q5HQX7 Uncharacterized protein SERP0419 n=3 Tax=Staphylococcus epidermidis RepID=Y419_STAEQ Length = 189 Score = 70.1 bits (170), Expect = 1e-10 Identities = 48/180 (26%), Positives = 96/180 (53%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366 ++ I G N+ ++DA++ ++E+KVG++ + + + V VR+ T T + Sbjct: 2 IRFEIHGDNLTITDAIRNYIEEKVGKLERYFNNVPNAVAHVRVKTYSNS-------TTKI 54 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 EVT+ K +RAEE + Y IDL+++ ++R++RK K + + +H ++ F Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRV--NRKHRDRGDQDIFVA 111 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + + + D+IE E ++ E++R+K F + P+ EA+ Q+ ++ HDF+ F Sbjct: 112 EVQESTTNNHADDIE------SENDI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIF 163 [233][TOP] >UniRef100_Q8ENI5 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ENI5_OCEIH Length = 185 Score = 69.7 bits (169), Expect = 2e-10 Identities = 51/179 (28%), Positives = 94/179 (52%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E++ A+K++VE K+ + ++++ DV ++ + +R E Sbjct: 1 MKFNIRGENIEVTGAIKEYVEKKISK-LERYFDSAPNTDVHVNLSVYND------EQRIE 53 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ + ++R E Y ++DLV ++R++RK K K R P F+E+ Sbjct: 54 VTI-PMTNLLLRGEVQHIDLYAAVDLVVDKLERQIRKHKTKINRKFRQNGSPKHA-FAEM 111 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 E E + ++DE +L E+VRTK F++ P+ EAI Q++M+ H+F+ F Sbjct: 112 ---------EKEARLAEDEEDENQL--EIVRTKRFNLKPMDSEEAILQMDMLGHEFFVF 159 [234][TOP] >UniRef100_A4VTG7 Ribosome-associated protein Y (PSrp-1) n=6 Tax=Streptococcus suis RepID=A4VTG7_STRSY Length = 192 Score = 69.7 bits (169), Expect = 2e-10 Identities = 51/180 (28%), Positives = 97/180 (53%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I+G N+E+++A++ +VE+KV + I+K+ +E++ +++ + R +R + Sbjct: 14 IKFSIRGENLEVTEALRTYVEEKVAK-IEKYFNEEQELNAKVNLKVY-------RDKRAK 65 Query: 362 VTLYTKRHGV-VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 V + V +RAE+ ++ YGSIDLV I+R++R+ K K R ++ E Sbjct: 66 VEVTIPVGAVTLRAEDISQEMYGSIDLVVDKIERQIRRNKTKIERKHRQKVATGQVFTDE 125 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 ++ E +E++ VVRTK D+ P+ + EA+ QLE++ HDF+ + Sbjct: 126 LV-----EQTGEEVK--------------VVRTKQVDLKPMDMEEAVLQLELLGHDFFIY 166 [235][TOP] >UniRef100_A4ISU0 Ribosomal subunit interface protein n=1 Tax=Geobacillus thermodenitrificans NG80-2 RepID=A4ISU0_GEOTN Length = 182 Score = 69.7 bits (169), Expect = 2e-10 Identities = 54/175 (30%), Positives = 100/175 (57%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 I+G N+E++ A++++VE K+G+ ++++ V V ++ + + G+G + EVT+ Sbjct: 5 IRGENIEVTPALREYVEKKIGK-LERYFDDTDHVHVNVNLKVYND-GQG----KIEVTIP 58 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 H ++RAEE + Y +IDLV+ ++R++RK K K + K +R K ++ P+ Sbjct: 59 IP-HLLLRAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVKLAAPV 112 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 P+ E +DEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F Sbjct: 113 PNGAAAVE-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157 [236][TOP] >UniRef100_Q8XIE9 30S ribosomal protein S30AE family n=1 Tax=Clostridium perfringens RepID=Q8XIE9_CLOPE Length = 179 Score = 69.3 bits (168), Expect = 2e-10 Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 1/181 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K+ + +N+EL++A+K VE K+ + + K+ E LS + Sbjct: 1 MKVTVHAKNIELTNALKDCVEKKISK-LSKYFEPGVEAKATLSVEKNKQI---------- 49 Query: 362 VTLYTKRHGVV-RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 V + +G++ R EE + Y SIDLV I+R++RK K + + R+ + L+F+ Sbjct: 50 VEIMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150 Query: 5 R 3 + Sbjct: 151 Q 151 [237][TOP] >UniRef100_B8FYZ1 Sigma 54 modulation protein/ribosomal protein S30EA n=2 Tax=Desulfitobacterium hafniense RepID=B8FYZ1_DESHD Length = 175 Score = 69.3 bits (168), Expect = 2e-10 Identities = 56/179 (31%), Positives = 89/179 (49%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 + + ++G+ ME++DA+K++V +VG+ ++K+S +V V L G R E Sbjct: 1 MNISVRGKQMEVTDALKEYVLKRVGK-LEKYSDEFMDVKVTLLVEEG--------RHRVE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT + ++R EE + Y SIDLV ++R++ K + + R LK E+ Sbjct: 52 VTAPLQGM-ILRGEEESGDMYASIDLVVEKLERQIDKYRTRINKRMR----TKVLKDHEI 106 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 P ED+ EEVVR K F P++V EAI Q+ +V H+FYAF Sbjct: 107 EHPALYEDDS----------------EEVVRHKKFGTKPMSVEEAIMQMNLVGHNFYAF 149 [238][TOP] >UniRef100_Q1GB46 Ribosomal protein S30EA n=2 Tax=Lactobacillus delbrueckii RepID=Q1GB46_LACDA Length = 185 Score = 69.3 bits (168), Expect = 2e-10 Identities = 50/180 (27%), Positives = 100/180 (55%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K ++G N+E+++A++ +VE ++ + ++K+ L ++V ++ + + + + E Sbjct: 2 LKYNVRGENIEVTEALRDYVEKRLTK-LEKYFDLSQDVIAHVNLKVYRD-----HSAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ + V+RAEE + Y SID VS ++R++RK K + R KG E Sbjct: 56 VTIPLP-YLVLRAEETTDDMYRSIDFVSEKLERQIRKYKTRVNRKSRE-KG-----VEEF 108 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 +P + EE+++E P + ++VR K ++ P+ EAI Q++M++HDF+ F+ Sbjct: 109 FIPEDAPVEEEKVEKAP--------MFKIVRNKRVNLKPMDPEEAILQMDMLEHDFFVFQ 160 [239][TOP] >UniRef100_C4GCR0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GCR0_9FIRM Length = 176 Score = 69.3 bits (168), Expect = 2e-10 Identities = 59/179 (32%), Positives = 88/179 (49%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K I GRN+EL+D +K VED + K RE + T + G+ R E Sbjct: 1 MKTTITGRNIELTDGLKSAVED----ALSKLDRYFREDTLAHVTMSVDKAGQ-----RVE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 +T+ K G+VR E+ + Y SID S I+ +L K + K D R KG Sbjct: 52 LTIPVKG-GIVRCEKTTDDMYVSIDAASEGIEDQLTKYRHKLVD--RAHKG--------A 100 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +L E+ DE D+EEE+ ++VRTK FD+ P+ +A Q+E++ H F+ F Sbjct: 101 VLNAAFEEGFDE-------DEEEEI--KIVRTKKFDLKPMYAEDACAQMELLGHSFFVF 150 [240][TOP] >UniRef100_C6VLR5 Ribosomal protein S30EA n=3 Tax=Lactobacillus plantarum RepID=C6VLR5_LACPJ Length = 188 Score = 69.3 bits (168), Expect = 2e-10 Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 4/179 (2%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVD----VRLSTRGGGEFGRGPRTRRCE 363 I+G N+E++ A++ +V+ +VG++ Y VD V L +T + E Sbjct: 6 IRGENIEVTQAIRDYVQKRVGKL---QKYFDNNVDSIAHVNLKVHPD-------KTAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ + V+RAEE + Y S+DLV+ ++R++RK K K R KG + F+ Sbjct: 56 VTIPLP-YLVLRAEETSPDMYASVDLVTDKLERQIRKYKTKVNRKSRE-KGYKAIDFAAT 113 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 DE D +++L +VVRTK + P+ EAI Q++M+ HDF+ + Sbjct: 114 ----------DETVAAADNDQDDKL--DVVRTKRVALKPMDNEEAILQMDMLGHDFFIY 160 [241][TOP] >UniRef100_C2EM10 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus ultunensis DSM 16047 RepID=C2EM10_9LACO Length = 181 Score = 69.3 bits (168), Expect = 2e-10 Identities = 50/179 (27%), Positives = 95/179 (53%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K ++G N+E++DA++ +VE ++ + ++K+ L ++V ++ R + + + E Sbjct: 2 LKYNVRGENIEVTDALRSYVEKRLNK-LEKYFELSQDVIAHVNLRVYRD-----HSAKVE 55 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ + V+RAEE+ + Y SID VS ++R++RK K + R KG + Sbjct: 56 VTIPLP-YLVLRAEENTDDMYRSIDFVSEKLERQIRKYKTRVNRKSRE-KG-----MQDF 108 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 + P E+E+ E ++VR K + P+ EAI Q++M++HDF+ F Sbjct: 109 FVEQPEEEEKKPSEF------------DIVRNKRVSLKPMDPEEAILQMDMLEHDFFVF 155 [242][TOP] >UniRef100_C0X601 Ribosome-associated inhibitor protein Y n=22 Tax=Enterococcus faecalis RepID=C0X601_ENTFA Length = 189 Score = 69.3 bits (168), Expect = 2e-10 Identities = 53/175 (30%), Positives = 93/175 (53%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 ++G N+E+++A++ +VE KVG+ ++++ E V ++ + E +T + EVT+ Sbjct: 12 VRGENIEVTEAIRDYVEKKVGK-LERYFSDSPEATVHVNLKVYTE-----KTAKVEVTIP 65 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 + V+RAEE + Y SIDLV ++R++RK K K R G N K + ++ Sbjct: 66 LP-YLVLRAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSRE-TGRNNTKAAVFLV-- 121 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +E E TP + D +VRTK + P+ EA+ Q+ M+ H+F+ F Sbjct: 122 -----GEETEETPSELD-------IVRTKRLSLKPMDSEEAVLQMNMLGHNFFIF 164 [243][TOP] >UniRef100_C0VZW2 Ribosome-associated inhibitor protein Y n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZW2_9ACTO Length = 220 Score = 69.3 bits (168), Expect = 2e-10 Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 18/198 (9%) Frame = -1 Query: 545 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---- 378 ++ + I GRN E+ + +VE+KV +V Q + R +DV L+ R PR Sbjct: 4 TMDITIVGRNAEIHPNFRAYVEEKVAKVTQLYPRAQR-IDVELTHE------RNPRQAET 56 Query: 377 TRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 198 R E+T++ K ++RAE + + ++D+ + +LR+ +++ DH R P + Sbjct: 57 AERIELTVFGKGP-IIRAEASSSDRHAAVDIAVGKLFERLRRARDRAKDHRRRYDTPIAV 115 Query: 197 KFSEVILPLPSEDEEDEIEITPQKDDEE-------ELIEE-------VVRTKYFDMPPLT 60 ++ P E E +E +T ++ E+ EE +VR K + P+T Sbjct: 116 DLGGIV---PDEVEVEEAPVTAEESLRSAADLKPGEVREEQFGDSPVIVRQKLHEAEPMT 172 Query: 59 VFEAIDQLEMVDHDFYAF 6 V +A+ Q+E+V H F+ F Sbjct: 173 VDQALYQMELVGHPFFLF 190 [244][TOP] >UniRef100_B9CQX8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus capitis SK14 RepID=B9CQX8_STACP Length = 191 Score = 69.3 bits (168), Expect = 2e-10 Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366 ++ I G N+ ++DA++ ++EDK+G++ + + + V V++ T + Sbjct: 2 IRFEIHGDNLTITDAIRNYIEDKIGKLERYFNNVPNAVAHVKVKTYSNS-------ATKI 54 Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 EVT+ K +RAEE + Y IDL++ ++R++RK K + R +G + +E Sbjct: 55 EVTIPLK-DVTLRAEERHDDLYAGIDLITGKLERQVRKYKTRVNRKHRD-RGDQEVFVAE 112 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 V E E+ + + E+ E++R+K F + P+ EA+ Q+ ++ HDF+ F Sbjct: 113 V-----QEASPGEVSGAEESVSDSEI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIF 165 [245][TOP] >UniRef100_Q0SR10 Ribosomal subunit interface protein n=1 Tax=Clostridium perfringens SM101 RepID=Q0SR10_CLOPS Length = 179 Score = 68.9 bits (167), Expect = 3e-10 Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 1/181 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K+ + +N+EL++A+K VE K+ + + K+ E LS + Sbjct: 1 MKVTVHAKNIELTNALKDCVEKKISK-LSKYFEPGVEAKATLSVEKNKQI---------- 49 Query: 362 VTLYTKRHGVV-RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186 V + +G++ R EE + Y SIDLV I+R++RK K + + R+ + L+F+ Sbjct: 50 VEVMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150 Query: 5 R 3 + Sbjct: 151 Q 151 [246][TOP] >UniRef100_C6LIX7 Ribosomal subunit interface protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LIX7_9FIRM Length = 176 Score = 68.9 bits (167), Expect = 3e-10 Identities = 51/180 (28%), Positives = 98/180 (54%), Gaps = 1/180 (0%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 ++ I G+N+E+++ ++ V DK+G+ ++++ E+ V +S ++ E Sbjct: 1 MRFTISGKNIEITEGLRTTVMDKLGK-LERYFTPDTEIIVTMSVE--------KERQKIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN-RLKFSE 186 VT+ K + ++R+E+ + Y SIDLV +I+R+LRK K K +H +G N R +F E Sbjct: 52 VTIPVKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKLI--AKHQEGSNFRREFIE 108 Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 +E+ +E EE+ ++RTK+F + P+ +A Q+E++ H+F+ F Sbjct: 109 ---------KEETVE-------PEEV--NIIRTKHFGIKPMYPEDACIQMELLGHNFFVF 150 [247][TOP] >UniRef100_C6JE61 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE61_9FIRM Length = 175 Score = 68.9 bits (167), Expect = 3e-10 Identities = 51/179 (28%), Positives = 91/179 (50%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K II G+N+ +++ +K V+DK+ + ++++ EV V LS ++ E Sbjct: 1 MKFIISGKNITVTEGLKTAVQDKLSK-LERYFTPDTEVVVTLSVE--------KERQKIE 51 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 VT+ K + ++R+E+ + Y SIDLV +I+R+LRK K K D K F + Sbjct: 52 VTIPVKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVD-----KQQAAANFQKA 105 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 L KD +E+ +++RTK F + P+ +A Q+E++ H+F+ F Sbjct: 106 YL---------------DKDYDEDEEVKIIRTKKFGIKPMYPEDACVQMELLGHNFFVF 149 [248][TOP] >UniRef100_B2TK14 Ribosome-associated protein Y n=3 Tax=Clostridium botulinum RepID=B2TK14_CLOBB Length = 177 Score = 68.9 bits (167), Expect = 3e-10 Identities = 52/180 (28%), Positives = 94/180 (52%) Frame = -1 Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363 +K+I+ +N+EL++A+++ VE K+ + + K+ E LS + R R+ Sbjct: 1 MKVIVIAKNIELTNALREMVEKKISK-LGKYFNSDIEAKATLSVQ---------RNRQIV 50 Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183 + V+R EE E Y +IDLV+ ++R++RK K K + K LKF E+ Sbjct: 51 EVMIPFNGVVLRGEEANEDMYRAIDLVAEKLERQIRKQKTKLS-----RKKSGSLKFGEI 105 Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3 + +++P DEEE ++V+ K F + P+ + EAI Q+E+V H+F+ ++ Sbjct: 106 V------------DLSPVAVDEEEA--KLVKRKRFGVKPMDIDEAILQMELVGHNFFVYQ 151 [249][TOP] >UniRef100_C5NVZ2 Ribosome-associated factor Y n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVZ2_9BACL Length = 181 Score = 68.9 bits (167), Expect = 3e-10 Identities = 51/175 (29%), Positives = 94/175 (53%) Frame = -1 Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351 ++G N+E++ A++++VE+KV + ++K+ E +V + + ++ E+T+ Sbjct: 6 VRGENLEITQAIREYVENKVSK-LEKYFADSLEANVYANAKVYKN-----NKKKIEITV- 58 Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171 R +RAEE E Y ++DLV ++R++RK K K GR KG F+E Sbjct: 59 PLRGVTLRAEETNEDLYAAVDLVVDKLERQMRKHKTKINRKGRE-KG-----FAE----- 107 Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6 EI +T + ++ EE ++ + K + P+T EA+ Q+E++ HDF+AF Sbjct: 108 -------EIILTSELEEAEETTLDLGKVKQLKVEPMTREEAVFQMELLGHDFFAF 155 [250][TOP] >UniRef100_C4E796 SSU ribosomal protein S30P; sigma 54 modulation protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=C4E796_STRRS Length = 218 Score = 68.9 bits (167), Expect = 3e-10 Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 17/195 (8%) Frame = -1 Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT 357 +I++GR+ +SD + HV K+ R I++ + + VDV ++ G R R E+T Sbjct: 3 IIVKGRHTGVSDRFRDHVTTKLAR-IERLDHKLISVDVEVTKESNPRI-IGQR-ERVELT 59 Query: 356 LYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK-ETDHGRHMKGPNRLKFS--- 189 +++ R VRAE A+ + ++D+ ++ +LR++ ++ + HG H P+ + + Sbjct: 60 IHS-RGPAVRAEATADDRFAALDIALGKLEGRLRRLADRRKIHHGNHCP-PSLAELAATA 117 Query: 188 -----EVILPLPSEDEEDEIEITPQKDDEEELIEE--------VVRTKYFDMPPLTVFEA 48 E + P P E+ E + + +++ ++ VVR K P+T+ +A Sbjct: 118 LAETLEAVPPRPREEPEVQSDFEADLSEDKTIVPIHMDGDGPLVVREKAHQADPMTIDQA 177 Query: 47 IDQLEMVDHDFYAFR 3 + ++E+V HDFY FR Sbjct: 178 LLEMELVGHDFYLFR 192