BB933078 ( RCC05189 )

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[1][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6T7E3_SOYBN
          Length = 291

 Score =  297 bits (760), Expect = 5e-79
 Identities = 154/192 (80%), Positives = 169/192 (88%)
 Frame = -1

Query: 578 SISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGG 399
           S  MSWDGPLSSVKL IQG+N+EL+DAVKQHVEDKVG+ +QKHS+LVREVDVRLS RGGG
Sbjct: 58  SAHMSWDGPLSSVKLTIQGKNLELTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGG 117

Query: 398 EFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 219
           EFGRGPRTRRCEVTL+TKRHGVVRAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGRH
Sbjct: 118 EFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRH 177

Query: 218 MKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQ 39
           MKG NRLK  E +  LP   EEDEI ++PQ  +EEE I+EVVRTKYFDMPPLTV EAI+Q
Sbjct: 178 MKGFNRLKVREPVEQLPV--EEDEI-LSPQ--EEEESIDEVVRTKYFDMPPLTVAEAIEQ 232

Query: 38  LEMVDHDFYAFR 3
           LE VDHDFY FR
Sbjct: 233 LENVDHDFYGFR 244

[2][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI0001984F94
          Length = 298

 Score =  278 bits (711), Expect = 2e-73
 Identities = 138/200 (69%), Positives = 168/200 (84%)
 Frame = -1

Query: 602 TTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDV 423
           TT++    ++ MSWDGPLSSVKLI+QG+N+EL+D V+ HVE+KVG+ +QKHS+LVREVDV
Sbjct: 58  TTRQTKPLAVRMSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDV 117

Query: 422 RLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 243
           RLS RGG E G+GP+ RRCEVTL+TK+HGVVRAEEHAET YGSID+VSSIIQRKLRKIKE
Sbjct: 118 RLSIRGG-ELGKGPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKE 176

Query: 242 KETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPL 63
           K++DHGRHMKG NRLK  +   PL     E+E ++ PQK+D  +LI E+VRTKYFDMPPL
Sbjct: 177 KDSDHGRHMKGFNRLKVRDPETPL----VEEEADVVPQKED-GDLINEIVRTKYFDMPPL 231

Query: 62  TVFEAIDQLEMVDHDFYAFR 3
           TV EA++QLE VDHDF+ FR
Sbjct: 232 TVPEAVEQLENVDHDFFGFR 251

[3][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
          Length = 306

 Score =  277 bits (708), Expect = 5e-73
 Identities = 144/200 (72%), Positives = 162/200 (81%)
 Frame = -1

Query: 602 TTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDV 423
           T    G  S+ MSWDGPL SVKLIIQG+N+EL+D VK+HVEDKVG+ +QKHS+LVREVDV
Sbjct: 66  TPLTHGGCSVKMSWDGPLHSVKLIIQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDV 125

Query: 422 RLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 243
           RLS RGG E G+GPR RRCEVTL+T RHGVVRAEE AET Y SIDLVSSIIQRKLRKIKE
Sbjct: 126 RLSVRGG-ELGKGPRIRRCEVTLFTNRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKE 184

Query: 242 KETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPL 63
           KE+DHGRHMKG NRLK  E   P+P   E D  E++ Q  + E+ IEEVVRTK+FDMPPL
Sbjct: 185 KESDHGRHMKGFNRLKVRE---PVPQVVEGDADEVSQQ--EVEDSIEEVVRTKFFDMPPL 239

Query: 62  TVFEAIDQLEMVDHDFYAFR 3
           TV EAI+QLE VDHDFY FR
Sbjct: 240 TVSEAIEQLENVDHDFYGFR 259

[4][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7QEV5_VITVI
          Length = 230

 Score =  274 bits (700), Expect = 5e-72
 Identities = 136/189 (71%), Positives = 162/189 (85%)
 Frame = -1

Query: 569 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 390
           MSWDGPLSSVKLI+QG+N+EL+D V+ HVE+KVG+ +QKHS+LVREVDVRLS RGG E G
Sbjct: 1   MSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGG-ELG 59

Query: 389 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 210
           +GP+ RRCEVTL+TK+HGVVRAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG
Sbjct: 60  KGPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKG 119

Query: 209 PNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 30
            NRLK  +   PL     E+E ++ PQK+D  +LI E+VRTKYFDMPPLTV EA++QLE 
Sbjct: 120 FNRLKVRDPETPL----VEEEADVVPQKED-GDLINEIVRTKYFDMPPLTVPEAVEQLEN 174

Query: 29  VDHDFYAFR 3
           VDHDF+ FR
Sbjct: 175 VDHDFFGFR 183

[5][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
           Tax=Ricinus communis RepID=B9SEK8_RICCO
          Length = 311

 Score =  273 bits (699), Expect = 6e-72
 Identities = 138/198 (69%), Positives = 166/198 (83%)
 Frame = -1

Query: 596 KRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRL 417
           KR   +++ MSW+GPLSSVKLI QG+N+EL+D VK+HVEDKVG+ +QKHS+LVREVDVRL
Sbjct: 70  KRGRRSAVRMSWEGPLSSVKLITQGKNLELTDTVKKHVEDKVGKAVQKHSHLVREVDVRL 129

Query: 416 STRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 237
           S RGG EFG+GP+ RRCEVTL+TK+HGV+RAEE AET Y SIDLVSSIIQRKLRKIKEK 
Sbjct: 130 SVRGG-EFGKGPKIRRCEVTLFTKKHGVIRAEEDAETIYASIDLVSSIIQRKLRKIKEKV 188

Query: 236 TDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTV 57
           +DHGRHMKG NRLK  E +   P +D+ DE++     D++E+ I+EVVRTKYFDMPPLTV
Sbjct: 189 SDHGRHMKGFNRLKVREPVAE-PVKDDTDEVD-GVLGDEDEDYIDEVVRTKYFDMPPLTV 246

Query: 56  FEAIDQLEMVDHDFYAFR 3
            EAI+QL+ VDHDFY FR
Sbjct: 247 SEAIEQLKNVDHDFYGFR 264

[6][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PHY3_POPTR
          Length = 306

 Score =  273 bits (697), Expect = 1e-71
 Identities = 140/195 (71%), Positives = 162/195 (83%)
 Frame = -1

Query: 587 GAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTR 408
           G +SI MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS R
Sbjct: 70  GGSSIRMSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVR 129

Query: 407 GGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 228
           GG E G+GPR RRCEVTL+TKRHGVVRAEE AET + SIDLVSSIIQRKLRKIK+KE+DH
Sbjct: 130 GG-ELGKGPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDH 188

Query: 227 GRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEA 48
           GRHMKG NRLK  E +  +  ED+ DE+     + ++E+ IEEVVRTKYFDMPPLTV EA
Sbjct: 189 GRHMKGFNRLKVREPMHQVVVEDDADEV----SQQEDEDYIEEVVRTKYFDMPPLTVSEA 244

Query: 47  IDQLEMVDHDFYAFR 3
           I+QLE V HDFY FR
Sbjct: 245 IEQLEHVHHDFYGFR 259

[7][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
           thaliana RepID=Q9FLV3_ARATH
          Length = 365

 Score =  271 bits (692), Expect = 4e-71
 Identities = 132/197 (67%), Positives = 167/197 (84%), Gaps = 1/197 (0%)
 Frame = -1

Query: 590 RGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLST 411
           R + ++ MSWDGPL+SVKLIIQG+N+ELS+ +KQHVE+KVG+ +QKHS+LVREVDVRLS 
Sbjct: 123 RSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSV 182

Query: 410 RGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 231
           RGG EFG+GPR RRCEVTL+TK+HGVVRAEE AET Y  IDLVS+IIQRKLRKIKEK++D
Sbjct: 183 RGG-EFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSD 241

Query: 230 HGRHMKGPNRLKFSEVILPLPSEDEEDEIEIT-PQKDDEEELIEEVVRTKYFDMPPLTVF 54
           HGRHMKG NRLK  E ++    ED ED  + +  ++++E++LI+E+VRTK F+MPPLTV 
Sbjct: 242 HGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVA 301

Query: 53  EAIDQLEMVDHDFYAFR 3
           EA++QLE+V HDFY F+
Sbjct: 302 EAVEQLELVSHDFYGFQ 318

[8][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
          Length = 231

 Score =  267 bits (683), Expect = 4e-70
 Identities = 137/189 (72%), Positives = 158/189 (83%)
 Frame = -1

Query: 569 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 390
           MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS RGG E G
Sbjct: 1   MSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELG 59

Query: 389 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 210
           +GPR RRCEVTL+TKRHGVVRAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG
Sbjct: 60  KGPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKG 119

Query: 209 PNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 30
            NRLK  E +  +  ED+ DE+     + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE 
Sbjct: 120 FNRLKVREPMHQVVVEDDADEV----SQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEH 175

Query: 29  VDHDFYAFR 3
           V HDFY FR
Sbjct: 176 VHHDFYGFR 184

[9][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
           RepID=RR30_SPIOL
          Length = 302

 Score =  255 bits (652), Expect = 2e-66
 Identities = 130/194 (67%), Positives = 155/194 (79%), Gaps = 3/194 (1%)
 Frame = -1

Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGE 396
           + MSWDGPLSSVKLI+QGRN+E+SD V+ HVEDKVG+ + KHS+LVREVDVRLS RGG +
Sbjct: 64  VCMSWDGPLSSVKLILQGRNLEVSDNVRSHVEDKVGKSVAKHSHLVREVDVRLSARGG-D 122

Query: 395 FGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM 216
             +GP+ RRCEVTL+TKRHGV+RAEE AE+ Y SIDLVSSIIQRKLRKIK+K +DHGRHM
Sbjct: 123 LSKGPKLRRCEVTLFTKRHGVIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHM 182

Query: 215 KGPNRLKFSE---VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAI 45
           KG NR K  +   V +      EE E    P   ++++ IEEVVRTKYFDMPPLT+ EA+
Sbjct: 183 KGFNRSKVRDPEPVRITREEVLEEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAV 242

Query: 44  DQLEMVDHDFYAFR 3
           +QLE VDHDFYAFR
Sbjct: 243 EQLENVDHDFYAFR 256

[10][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
           RepID=C9EFD1_SOLTU
          Length = 280

 Score =  250 bits (638), Expect = 7e-65
 Identities = 127/196 (64%), Positives = 157/196 (80%), Gaps = 5/196 (2%)
 Frame = -1

Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGE 396
           + MSWDGPLSSVKLI+QG+N+EL+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E
Sbjct: 46  VRMSWDGPLSSVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-E 104

Query: 395 FGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM 216
            G+GP+ RRCEVTL+TK+HGV+RAEE AE+ YGSID+VSSIIQRKLRKIKEK++DHGRHM
Sbjct: 105 LGKGPKIRRCEVTLFTKKHGVIRAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHM 164

Query: 215 KGPNRLKFSEVILPLPSED-----EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFE 51
           KG +RLK  +  + L  ED     +E+E+E     D  +  + EVVR K FDMPPL+V E
Sbjct: 165 KGFDRLKVRDPEVLLVQEDLETLPQEEEVE---DDDKSDGFVTEVVRKKSFDMPPLSVNE 221

Query: 50  AIDQLEMVDHDFYAFR 3
           AI+QLE VDHDFY FR
Sbjct: 222 AIEQLENVDHDFYGFR 237

[11][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
           RepID=Q672Q2_SOLLC
          Length = 311

 Score =  244 bits (623), Expect = 4e-63
 Identities = 125/196 (63%), Positives = 154/196 (78%), Gaps = 5/196 (2%)
 Frame = -1

Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGE 396
           + MSWDGPLSSVKLI+QG+N+EL+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E
Sbjct: 74  VRMSWDGPLSSVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-E 132

Query: 395 FGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM 216
            G+GP+ RRCEVTL+TK+HGV+RAEE  E+ YGSID+VSSIIQRKLRKIKEK++D GRHM
Sbjct: 133 LGKGPKIRRCEVTLFTKKHGVIRAEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHM 192

Query: 215 KGPNRLKFSEVILPLPSED-----EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFE 51
           KG +RLK  +    L  ED     +E+E+E     D  +  + EVVR K FDMPPL+V E
Sbjct: 193 KGFDRLKVRDPEALLVQEDLETLSQEEEVE----DDKSDGFVTEVVRKKSFDMPPLSVNE 248

Query: 50  AIDQLEMVDHDFYAFR 3
           AI+QLE VDHDFY FR
Sbjct: 249 AIEQLENVDHDFYGFR 264

[12][TOP]
>UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6TFU4_SOYBN
          Length = 208

 Score =  232 bits (591), Expect = 2e-59
 Identities = 119/163 (73%), Positives = 138/163 (84%)
 Frame = -1

Query: 608 TTTTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV 429
           T+T+ R  + S  MSWDGPLSSVKLIIQG+N+EL+DAVK+HVEDKVG+ +QKHS+LVREV
Sbjct: 48  TSTSNRGRSLSTRMSWDGPLSSVKLIIQGKNLELTDAVKRHVEDKVGKAVQKHSHLVREV 107

Query: 428 DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKI 249
           DVRLS RGGGEFGRGPRTRRCEVTL+TKRHGVVRAEE AE+TYGSIDLVSSIIQRKLRKI
Sbjct: 108 DVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKI 167

Query: 248 KEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDD 120
           KEK +DHGRHMKG NRLK      P       DEI ++P++++
Sbjct: 168 KEKVSDHGRHMKGFNRLKLGS---PWSITYGRDEI-LSPREEE 206

[13][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
           bicolor RepID=C5WRX8_SORBI
          Length = 310

 Score =  231 bits (588), Expect = 5e-59
 Identities = 119/200 (59%), Positives = 155/200 (77%), Gaps = 2/200 (1%)
 Frame = -1

Query: 596 KRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRL 417
           +RR + S+ M+WDGPLSSV+LI+QGRN++LSD +K+H+EDKVGR + KH +LVREVDVRL
Sbjct: 54  RRRVSFSVRMAWDGPLSSVRLIMQGRNVKLSDKLKEHIEDKVGRAVSKHCHLVREVDVRL 113

Query: 416 STRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 237
           S R GGE GRGP+T RCE+TL++KRHGV+RAEE AE+TY SIDL ++II+RKLRKIKEKE
Sbjct: 114 SAR-GGELGRGPKTSRCEITLFSKRHGVLRAEEDAESTYASIDLAAAIIKRKLRKIKEKE 172

Query: 236 TDHGRHMKGPNRLKFSEVILPLPSED--EEDEIEITPQKDDEEELIEEVVRTKYFDMPPL 63
           T+  R   G     + E  LPL  +D  E DE+      +DE+ ++ +VVRTK F+MPPL
Sbjct: 173 TEVRRDGDGGAGGAWEEE-LPLLDDDLVEADELAAAVGAEDEQTVVAKVVRTKVFEMPPL 231

Query: 62  TVFEAIDQLEMVDHDFYAFR 3
           TV EA++QL+ V H+FY FR
Sbjct: 232 TVEEALEQLDNVGHNFYCFR 251

[14][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
           RepID=B6TYP8_MAIZE
          Length = 309

 Score =  231 bits (588), Expect = 5e-59
 Identities = 120/202 (59%), Positives = 154/202 (76%), Gaps = 2/202 (0%)
 Frame = -1

Query: 602 TTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDV 423
           T +RR + S+ M+WDGPLSSV+LI+Q RN +LS+ +K+H+EDKVGR + KH +LVREVDV
Sbjct: 52  TRRRRVSVSVRMAWDGPLSSVRLIMQSRNAKLSEKLKEHIEDKVGRAVSKHCHLVREVDV 111

Query: 422 RLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 243
           RLS RGG E GRGP+T RCE+TL+TKRHGV+RAEE AE+TY SIDL ++I++RKLRKIKE
Sbjct: 112 RLSARGG-ELGRGPKTSRCEITLFTKRHGVLRAEEDAESTYASIDLAAAIVKRKLRKIKE 170

Query: 242 KETDHGRHMKGPNRLKFSEVILP--LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMP 69
           KET+  R   G +     + I P  L    E D++E     +DEE ++ +VVRTK F+MP
Sbjct: 171 KETEVRR---GGDADGVWDEIPPADLLPPAEADDLEAAVGAEDEETVLAKVVRTKVFEMP 227

Query: 68  PLTVFEAIDQLEMVDHDFYAFR 3
           PLTV EA++QLE VDHDFY FR
Sbjct: 228 PLTVEEALEQLENVDHDFYCFR 249

[15][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
          Length = 309

 Score =  225 bits (573), Expect = 2e-57
 Identities = 118/204 (57%), Positives = 155/204 (75%), Gaps = 5/204 (2%)
 Frame = -1

Query: 599 TKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 420
           ++R  A S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR
Sbjct: 62  SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121

Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240
           LS RGG E  RGP+  RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK
Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180

Query: 239 ETDHGRHMKG--PNRLKFSEVILPLPSEDEE---DEIEITPQKDDEEELIEEVVRTKYFD 75
           ETD  RH+KG  P    +   +L    +D +    ++E     +DE+ ++ +VVRTK F+
Sbjct: 181 ETD-VRHLKGTKPPVSDWPPSLLDNNDDDAQAQLKDLEEAVGAEDEDTVLTKVVRTKVFE 239

Query: 74  MPPLTVFEAIDQLEMVDHDFYAFR 3
           MPPL+V EA++QL  VDH+FYAFR
Sbjct: 240 MPPLSVEEAMEQLVNVDHNFYAFR 263

[16][TOP]
>UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJW3_9ROSI
          Length = 268

 Score =  219 bits (558), Expect = 1e-55
 Identities = 116/164 (70%), Positives = 134/164 (81%)
 Frame = -1

Query: 587 GAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTR 408
           G +SI MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS R
Sbjct: 70  GGSSIRMSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVR 129

Query: 407 GGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 228
           GG E G+GPR RRCEVTL+TKRHGVVRAEE AET Y SIDL SSIIQRKLRKIK+KE+DH
Sbjct: 130 GG-ELGKGPRIRRCEVTLFTKRHGVVRAEEDAETIYASIDLASSIIQRKLRKIKDKESDH 188

Query: 227 GRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEV 96
           GRHMKG NRLK  E   P+    E+D  E++ Q+D  E+ IEEV
Sbjct: 189 GRHMKGFNRLKVRE---PMHQVVEDDADEVSQQED--EDYIEEV 227

[17][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=B8LMC5_PICSI
          Length = 321

 Score =  218 bits (555), Expect = 3e-55
 Identities = 118/207 (57%), Positives = 152/207 (73%), Gaps = 8/207 (3%)
 Frame = -1

Query: 599 TKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 420
           T  RG  + ++ W GPLSSV+LIIQG+N +L+DAVK ++E+KVG  +QKH+ LVREVDVR
Sbjct: 70  TSSRGQINCTL-WSGPLSSVRLIIQGKNFQLTDAVKAYIEEKVGIAVQKHANLVREVDVR 128

Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240
           LS RGG E G+GP+ RRCEVTL+TK+HGVVRAEE AET Y SID+VS II+RKLRKIKEK
Sbjct: 129 LSIRGG-EVGKGPKIRRCEVTLFTKKHGVVRAEEEAETIYASIDIVSDIIRRKLRKIKEK 187

Query: 239 ETDHGRHMKGPNRLKFSEVILPLPSEDEED-EIEITPQKDDEE-------ELIEEVVRTK 84
           +  HGR  K   + K  E++  +  + +E  + E+    D EE       +L +EVVRTK
Sbjct: 188 DGGHGRPSKMRKQPKLGELLSTVVMDVKETRDKELDDLADVEEMRYEKIDDLSDEVVRTK 247

Query: 83  YFDMPPLTVFEAIDQLEMVDHDFYAFR 3
           YF+MPP++  EA++QL  VDHDFYAFR
Sbjct: 248 YFEMPPMSPEEALEQLMNVDHDFYAFR 274

[18][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
           RepID=C6YXL0_ORYSJ
          Length = 321

 Score =  212 bits (540), Expect = 2e-53
 Identities = 113/202 (55%), Positives = 149/202 (73%), Gaps = 5/202 (2%)
 Frame = -1

Query: 599 TKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 420
           ++R  A S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR
Sbjct: 62  SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121

Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240
           LS RGG E  RGP+  RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK
Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180

Query: 239 ETDHGRHMKG--PNRLKFSEVILPLPSEDEE---DEIEITPQKDDEEELIEEVVRTKYFD 75
           ETD  RH+KG  P    +   +L    +D +    ++E     +DE+ ++  VVRTK F+
Sbjct: 181 ETD-VRHLKGTKPPVSDWPPSLLDNNDDDAQAQLKDLEEAVGAEDEDTVLTRVVRTKVFE 239

Query: 74  MPPLTVFEAIDQLEMVDHDFYA 9
           MPPL+  EA++QL   DH F+A
Sbjct: 240 MPPLSGEEAMEQLGNGDHTFHA 261

[19][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TA00_PHYPA
          Length = 297

 Score =  197 bits (500), Expect = 7e-49
 Identities = 107/197 (54%), Positives = 140/197 (71%)
 Frame = -1

Query: 593 RRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS 414
           ++G  +  M+W G L+ V+L+IQG+++EL+DA+KQ+VE+KVG  +   S LV+EVDVR+S
Sbjct: 71  QKGRVTTCMAWGGTLAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMS 130

Query: 413 TRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 234
            RGG E GRG R +RCEVTL+TK+HGVVRAEE AE+ Y SID VS +I RKLRKIKEK+ 
Sbjct: 131 VRGG-ETGRGERLQRCEVTLFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDG 189

Query: 233 DHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 54
            HGR  K   R+   EV+    S +  D   I  +K D  +L +EVVRTKYF+M P+   
Sbjct: 190 GHGRPAKYSPRI--GEVL----SNEVVDLDPILERKPD--DLPDEVVRTKYFEMRPMKPL 241

Query: 53  EAIDQLEMVDHDFYAFR 3
           EA++QL  V HDFYAFR
Sbjct: 242 EALEQLVNVGHDFYAFR 258

[20][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RWK9_PHYPA
          Length = 221

 Score =  196 bits (498), Expect = 1e-48
 Identities = 103/189 (54%), Positives = 137/189 (72%)
 Frame = -1

Query: 569 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 390
           M+W G L+ V+L+IQG+++EL+DA+KQ+VE+KVG  +   S LV+EVDVR+S RGG E G
Sbjct: 1   MAWGGALAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGG-ETG 59

Query: 389 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 210
           RG + +RCEVTL+TK+HGVVRAEE AE+ Y SID VS +I RKLRKIKEK+  HGR  K 
Sbjct: 60  RGGKLQRCEVTLFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPTKS 119

Query: 209 PNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 30
            +  +  EV+    S++  D   I  +K D  +L +E+VRTKYF+M P+   EA++QL  
Sbjct: 120 RHSPRIGEVL----SDEVVDLDPILGRKPD--DLPDEIVRTKYFEMRPMKPLEALEQLVN 173

Query: 29  VDHDFYAFR 3
           V HDFYAFR
Sbjct: 174 VGHDFYAFR 182

[21][TOP]
>UniRef100_Q10AC8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative,
           expressed n=1 Tax=Oryza sativa Japonica Group
           RepID=Q10AC8_ORYSJ
          Length = 241

 Score =  181 bits (459), Expect = 4e-44
 Identities = 89/130 (68%), Positives = 110/130 (84%)
 Frame = -1

Query: 599 TKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 420
           ++R  A S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR
Sbjct: 62  SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121

Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240
           LS RGG E  RGP+  RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK
Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180

Query: 239 ETDHGRHMKG 210
           ETD  RH+KG
Sbjct: 181 ETD-VRHLKG 189

[22][TOP]
>UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR
          Length = 127

 Score =  142 bits (359), Expect = 2e-32
 Identities = 81/148 (54%), Positives = 99/148 (66%)
 Frame = -1

Query: 515 MELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 336
           M+L+D VK+HVEDKVG+ +QK S+LVREVD RLS R GGE G+GPR R+C       RHG
Sbjct: 1   MQLTDTVKEHVEDKVGKAVQKFSHLVREVDARLSVR-GGELGKGPRIRKC-------RHG 52

Query: 335 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 156
           VVRAEE +ET Y +IDLV SIIQ KLRK+KE E+DHGRHMKG NRLK             
Sbjct: 53  VVRAEEDSETIYATIDLVLSIIQSKLRKMKE-ESDHGRHMKGLNRLKI------------ 99

Query: 155 EDEIEITPQKDDEEELIEEVVRTKYFDM 72
            D+ +   +K+D++ L E V    Y  M
Sbjct: 100 RDDADAVSRKEDDDYLDELVSVASYHQM 127

[23][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
          Length = 209

 Score =  129 bits (325), Expect = 1e-28
 Identities = 82/184 (44%), Positives = 110/184 (59%), Gaps = 4/184 (2%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
           +KL+I G+N+E++DA++ +V+ K+ +       L  E+DV LS        R PR    +
Sbjct: 1   MKLVIHGKNIEITDAIRDYVQQKIEKAANHFQNLTTEIDVHLSV------ARNPRINPKQ 54

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD-HGRHMKGPNRLK 195
             EVT+YT    V+RAEE +E  Y SIDLVS  I R+LRK KE+  D H R  + P    
Sbjct: 55  TAEVTIYTNG-SVIRAEESSENLYASIDLVSDKIARQLRKFKERRQDKHSRSKEEP---- 109

Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
              V +PL ++   D    TP      EL EEVVRTKYF MPP+T+ EA++QLE+VDHDF
Sbjct: 110 --VVSVPLVTDLTGDR---TP------ELPEEVVRTKYFAMPPMTLREALEQLELVDHDF 158

Query: 14  YAFR 3
           Y FR
Sbjct: 159 YMFR 162

[24][TOP]
>UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8J8B2_CHLRE
          Length = 286

 Score =  125 bits (313), Expect = 3e-27
 Identities = 83/220 (37%), Positives = 117/220 (53%), Gaps = 19/220 (8%)
 Frame = -1

Query: 605 TTTKRRGAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVD 426
           T   R G    + S      +V++IIQGR + ++DA+K +VE+KV + +   S+ ++EVD
Sbjct: 49  TRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVD 108

Query: 425 VRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIK 246
           V LS RGG     G + ++ EVT+YT R+GVVR E+     Y +IDLV   I+ KL+KIK
Sbjct: 109 VTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQKIK 168

Query: 245 EKETDHGRHMKGPNRLKFSEVILPLPSEDEED------EIEITPQKDDEEELIE------ 102
           EK    G     P R        P    DEED      E+++  Q  D+EE ++      
Sbjct: 169 EKAISRG---AWPGRAG------PKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQRQFAEL 219

Query: 101 ------EVVRTKYFDM-PPLTVFEAIDQLEMVDHDFYAFR 3
                  V+R+K   +  P+TV EAID LE V H FY FR
Sbjct: 220 NRIYPANVMRSKTVVLADPITVEEAIDALEAVGHSFYVFR 259

[25][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
           JA-3-3Ab RepID=Q2JS19_SYNJA
          Length = 191

 Score =  124 bits (311), Expect = 6e-27
 Identities = 78/183 (42%), Positives = 107/183 (58%), Gaps = 4/183 (2%)
 Frame = -1

Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRR 369
           KL+IQG+N+E++DA++ +V++K+ R ++  + +  EVDV LS        R PR    + 
Sbjct: 3   KLVIQGKNVEITDAIRSYVQEKIERAVKHFAQITSEVDVNLSV------ARNPRISANQS 56

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKF 192
            EVT+Y     V+RAEE +E  Y SID V+  + RKLRK KE+   H  RH       K 
Sbjct: 57  AEVTVYANGT-VIRAEESSENLYASIDRVADKLARKLRKYKERNGVHRIRHSP-----KT 110

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
           S  +   P  D  +        + + EL  EVVRTKYF MPP+TV EA+ QLE+VDHDFY
Sbjct: 111 SVAVAQQPLTDPLNT-------ERQAELPPEVVRTKYFAMPPMTVQEALHQLELVDHDFY 163

Query: 11  AFR 3
            FR
Sbjct: 164 VFR 166

[26][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
           JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
          Length = 190

 Score =  124 bits (311), Expect = 6e-27
 Identities = 78/183 (42%), Positives = 107/183 (58%), Gaps = 4/183 (2%)
 Frame = -1

Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRR 369
           KL+IQG+N+E++DA++ +V++K+ R +   + +  EVDV LS        R PR   ++ 
Sbjct: 3   KLVIQGKNVEITDAIRSYVQEKIERAVSHFAQITSEVDVNLSV------ARNPRISASQS 56

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKF 192
            EVT+Y     V+RAEE +E  Y SID V+  + RKLRK KE+   H  RH       K 
Sbjct: 57  AEVTVYANGT-VIRAEESSENLYASIDRVADKLARKLRKYKERNGIHRVRHTP-----KT 110

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
           S  +   P  D  +        + + EL  EVVRTKYF MPP+TV EA+ QLE+VDHDFY
Sbjct: 111 SVAVAQQPVTDPLNT-------ERQAELPAEVVRTKYFAMPPMTVQEALHQLELVDHDFY 163

Query: 11  AFR 3
            FR
Sbjct: 164 VFR 166

[27][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
           RepID=B0CDL4_ACAM1
          Length = 212

 Score =  124 bits (310), Expect = 8e-27
 Identities = 75/183 (40%), Positives = 111/183 (60%), Gaps = 4/183 (2%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
           +KL+I G+N+E++DA++++V  K+ +    +  L  E+DV LS        R PR    +
Sbjct: 1   MKLVIHGKNIEITDAIREYVHQKIEKAANHYQNLTTEIDVHLSV------ARNPRITTKQ 54

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
             EVTL+     V+RAEE +E  Y SIDLV+  I R+LRK KEK     R  KGPN+   
Sbjct: 55  TAEVTLFVNG-SVIRAEESSENLYASIDLVADKIARQLRKYKEK-----RQTKGPNKGSN 108

Query: 191 SEVILPLPSEDEEDEI-EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
               + L + +E+  I ++T  +D   EL EEVVR KYF + P++V +A++QL++VDHDF
Sbjct: 109 RSKAVALQTPEEQPLIGDLT--RDRAPELPEEVVRCKYFAISPMSVHDALEQLDLVDHDF 166

Query: 14  YAF 6
           Y F
Sbjct: 167 YVF 169

[28][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
          Length = 212

 Score =  124 bits (310), Expect = 8e-27
 Identities = 76/183 (41%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
           +KL+IQG+N+E++DA+ ++V+ K+ + +     L  EVDV LS        R PR    +
Sbjct: 1   MKLVIQGKNLEITDAIHEYVQQKIAKAVSHFQQLTNEVDVHLSV------ARNPRINPRQ 54

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
             EVT+Y     V+RA+E +E  Y SIDLV+  I R+LRK KEK     R  K     K 
Sbjct: 55  TAEVTIYANGT-VIRAQESSENLYASIDLVADKIARQLRKYKEK-----RMAKQYQLPKT 108

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
            EV+   P  D+          D   +L EEVVRTKYF MPP+++ EA++QL+++DHDFY
Sbjct: 109 GEVVAQKPIVDDLIG-------DRTVKLPEEVVRTKYFAMPPMSIQEALEQLQLIDHDFY 161

Query: 11  AFR 3
            FR
Sbjct: 162 MFR 164

[29][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
           Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
          Length = 213

 Score =  123 bits (309), Expect = 1e-26
 Identities = 76/182 (41%), Positives = 108/182 (59%), Gaps = 3/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 369
           +KL+I G+N+E++DA++++V  K+ + +     +  EVDV LS        R PR  TR+
Sbjct: 1   MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQ 54

Query: 368 C-EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
             EVT+Y     V+RAEE +E  Y SIDLV+  I R+LRK KE++ D     +    L  
Sbjct: 55  AAEVTIYANG-SVIRAEESSENLYASIDLVADKISRQLRKYKERKQD-----QKTQALPT 108

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
           +E I+P       + +      D   EL EEVVRTKYF MPP+TV EA++QL++V HDFY
Sbjct: 109 TETIVP-------ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFY 161

Query: 11  AF 6
            F
Sbjct: 162 MF 163

[30][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
           RepID=A0YIH4_9CYAN
          Length = 212

 Score =  122 bits (307), Expect = 2e-26
 Identities = 75/182 (41%), Positives = 110/182 (60%), Gaps = 3/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
           +KL++QG+N+E+++A+ ++V  K+ + +  +  L  EVDV LS        R PR    +
Sbjct: 1   MKLVVQGKNLEITEAIHEYVHQKITKAVSHYQQLTNEVDVHLS------IARNPRINPKQ 54

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
             EVT+Y     V+RA+E +E  Y SIDLV+  I R+LRK K+K    G+H+  P   K 
Sbjct: 55  TAEVTIYANGT-VIRAQESSENLYASIDLVADKIARQLRKFKDKR--QGKHLHPP---KL 108

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
           +EV+   P    ED I      D + EL  EVVRTKYF MPP+ + +A++QL++VDHDFY
Sbjct: 109 AEVVENQPVI--EDLIG-----DRQPELPPEVVRTKYFAMPPMNLQDALEQLQLVDHDFY 161

Query: 11  AF 6
            F
Sbjct: 162 VF 163

[31][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
           RepID=Q8YSA5_ANASP
          Length = 213

 Score =  122 bits (305), Expect = 3e-26
 Identities = 75/182 (41%), Positives = 107/182 (58%), Gaps = 3/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 369
           +KL+I G+N+E++DA++++V  K+ + +     +  EVDV LS        R PR  TR+
Sbjct: 1   MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQ 54

Query: 368 C-EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
             EVT+Y     V+RAEE +E  Y SIDLV+  I R+LRK KE++ D     +       
Sbjct: 55  AAEVTIYANG-SVIRAEESSENLYASIDLVADKISRQLRKYKERKQDQKTQAQPT----- 108

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
           +E I+P       + +      D   EL EEVVRTKYF MPP+TV EA++QL++V HDFY
Sbjct: 109 TETIVP-------ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFY 161

Query: 11  AF 6
            F
Sbjct: 162 MF 163

[32][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Microcoleus chthonoplastes PCC 7420
           RepID=B4VJW0_9CYAN
          Length = 215

 Score =  120 bits (302), Expect = 7e-26
 Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
           +KL+IQG+N+E++D+++++V  K+ + +     +  EVDV LS        R PR    +
Sbjct: 1   MKLVIQGKNIEITDSIREYVNQKIEKAVNHFQNMTTEVDVHLSV------ARNPRINTKQ 54

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
             EVT+Y  +  V+RA+E +E  Y SIDLV+  IQR+LRK KEK+       K   + K 
Sbjct: 55  TAEVTIYANKT-VIRAQESSEDLYASIDLVADKIQRQLRKYKEKQ-----QKKTQTQPKT 108

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
             VI   P    ED I      D   EL  EVVR KYF MPP+T+ EA +QL++VDHDFY
Sbjct: 109 GAVIHEAPVV--EDLIG-----DRTPELPTEVVRMKYFAMPPMTIEEATEQLQLVDHDFY 161

Query: 11  AFR 3
            FR
Sbjct: 162 MFR 164

[33][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
          Length = 284

 Score =  120 bits (302), Expect = 7e-26
 Identities = 68/185 (36%), Positives = 116/185 (62%), Gaps = 3/185 (1%)
 Frame = -1

Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHS-YLVREVDVRLSTRGGGEFGR-GPRT 375
           +S K+I+QGR++E++D+++++ E+K+ + +     + VREVDVR S+RGG +    G   
Sbjct: 78  ASTKVIVQGRHLEITDSIREYAEEKINKAVAHFDQHDVREVDVRCSSRGGADKKTPGGAL 137

Query: 374 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMKGPNRL 198
           ++ EVT+YT R+G++R+EE A+  Y SID VS  ++RKLRK+KEK+ +   +H K   + 
Sbjct: 138 QKTEVTVYT-RNGIIRSEEEADDLYASIDAVSDKLERKLRKVKEKKISKRPKHNKNAPKA 196

Query: 197 KFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 18
           +   ++  + + DE           DE    +EVVR K+  +   TV+EA +++E + H 
Sbjct: 197 QTDAIVEEMQAADE--------ALADESMDYDEVVREKFHPVRKCTVYEAAEEMENLGHT 248

Query: 17  FYAFR 3
           F+AFR
Sbjct: 249 FFAFR 253

[34][TOP]
>UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806
           RepID=A8YEZ8_MICAE
          Length = 199

 Score =  120 bits (301), Expect = 9e-26
 Identities = 73/179 (40%), Positives = 105/179 (58%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +KL+IQG N+ +++A+  +VE K+ + ++  + +  +VDV LS        R P   + E
Sbjct: 1   MKLLIQGNNIAVTEAIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHKAE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KE+  DH  H    + +K SEV
Sbjct: 58  VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTH----STVKTSEV 112

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           +   P +D           D   EL  EVVR KYF MPP+T+ EA+ QL++VDHDF+ F
Sbjct: 113 VQEKPLDDNLIG-------DRTPELPAEVVRMKYFAMPPMTIEEALTQLQLVDHDFFMF 164

[35][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
           RepID=Q8DKM6_THEEB
          Length = 209

 Score =  119 bits (298), Expect = 2e-25
 Identities = 73/180 (40%), Positives = 104/180 (57%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           ++L+I G+N++++D ++ ++  K+ R       ++ EVDV LS          P+ +  E
Sbjct: 1   MRLVIHGKNIDITDGIRSYLNQKIERATSHFQNVINEVDVHLSVARNRS--TAPK-QTAE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT++     V+RAEE +E  Y SIDLV+  I RKLRK+KEK  D  R  K  N +   EV
Sbjct: 58  VTVFVNG-SVIRAEESSENLYASIDLVADKIARKLRKLKEKRQDKSR-AKDTNSVVEPEV 115

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
           +  L  +        TPQ      L E+VVR KYF MPP+T+ EA++ LEMVDHDFY FR
Sbjct: 116 VTDLVGDR-------TPQ------LPEQVVRMKYFAMPPMTIQEALEHLEMVDHDFYVFR 162

[36][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
           punctiforme PCC 73102 RepID=B2IVM1_NOSP7
          Length = 214

 Score =  119 bits (297), Expect = 2e-25
 Identities = 75/183 (40%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 369
           +KL+I  +N+E++DA++++V  K+ +       +  EVDV LS        R PR  TR+
Sbjct: 1   MKLVIHSKNIEITDAIREYVHQKIEKAASHFQSITNEVDVHLSV------ARNPRINTRQ 54

Query: 368 C-EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
             EVT+Y     V+RAEE +E  Y SIDLV+  I R+LRK KE+  D  +    P  +  
Sbjct: 55  AAEVTIYANG-SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDQ-KTQSQPTEVVV 112

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
           +E ++P    D       TP      EL  EVVRTKYF MPP+T+ EA++QL++V HDFY
Sbjct: 113 AESVVPDLIGDR------TP------ELPNEVVRTKYFSMPPMTLAEALEQLQLVGHDFY 160

Query: 11  AFR 3
            FR
Sbjct: 161 MFR 163

[37][TOP]
>UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2
           Tax=Cyanothece RepID=C7QW97_CYAP0
          Length = 205

 Score =  119 bits (297), Expect = 2e-25
 Identities = 73/186 (39%), Positives = 107/186 (57%)
 Frame = -1

Query: 560 DGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGP 381
           D  + S+KL+IQG N+++++++  +V++K+ + ++    +  +VDV LS        R  
Sbjct: 2   DNGVLSMKLLIQGNNIDVTESIHDYVQEKLEKAVKHFQSITTKVDVHLSVARNA---RIT 58

Query: 380 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 201
              + EVT+Y     V+RA+E +E+ Y SIDLVS  I R+LRK KEK  +     K PN 
Sbjct: 59  NKHKAEVTVYANGT-VIRAQEGSESLYASIDLVSDKIARQLRKYKEKLNNK----KAPNP 113

Query: 200 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 21
           +K  EV      E +          D   EL  EV+R KYF MPP+T+ EA+ QLE+VDH
Sbjct: 114 VKVGEVTTATAIEGDLIG-------DRTPELPAEVIRMKYFAMPPMTIDEALHQLELVDH 166

Query: 20  DFYAFR 3
           DFY FR
Sbjct: 167 DFYMFR 172

[38][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
           azollae' 0708 RepID=B9YPU1_ANAAZ
          Length = 214

 Score =  118 bits (296), Expect = 3e-25
 Identities = 74/183 (40%), Positives = 102/183 (55%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
           +KL+I G+N+E++DA++++V  K+ R +     +  EV+V LS        R PR    +
Sbjct: 1   MKLVIHGKNIEITDAIREYVHQKIERAVNHFQSITNEVNVHLSV------ARNPRISTKQ 54

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
             EVT+Y     V+RAEE +E  Y SIDLV+  I R+LRK KE+  DH       N    
Sbjct: 55  AAEVTIYANG-SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDHKTQPIPTNEAVV 113

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
           +E +      D       TP      EL  EVVRTKYF MPP+T+ EA +QL++V HDFY
Sbjct: 114 AEPVADSLIGDR------TP------ELPGEVVRTKYFPMPPMTLAEAQEQLQLVGHDFY 161

Query: 11  AFR 3
            FR
Sbjct: 162 MFR 164

[39][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
          Length = 213

 Score =  117 bits (294), Expect = 6e-25
 Identities = 72/182 (39%), Positives = 103/182 (56%), Gaps = 3/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
           +KL+I G+N+E++DA++++V  K+ + +     +  EVDV LS        R PR    +
Sbjct: 1   MKLVIHGKNIEITDAIREYVHQKIEKAVSHFQNITNEVDVHLSV------ARNPRITTKQ 54

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
             EVT++     V+RAEE +E  Y SIDLV+  I R+LRK KE+  D   +    N    
Sbjct: 55  AAEVTIFANG-SVIRAEESSENLYASIDLVADKIARQLRKYKERLQDQKTNAPPTN---- 109

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
            +V++P P       +      D   EL  EVVRTKYF MPP+TV EA +QL++V HDFY
Sbjct: 110 -QVLVPEP-------VAADLIGDRTPELPNEVVRTKYFSMPPMTVAEATEQLQLVGHDFY 161

Query: 11  AF 6
            F
Sbjct: 162 MF 163

[40][TOP]
>UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7
          Length = 199

 Score =  117 bits (293), Expect = 7e-25
 Identities = 69/180 (38%), Positives = 108/180 (60%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +KL+IQG N+ +++A+  +V+ K+ + ++    L  +VDV LS     +  R     + E
Sbjct: 1   MKLLIQGNNITVTEAIHDYVQQKLEKAVKHFQTLTTKVDVHLSV---AKNARIQNKHKAE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KE++ +   H    + +K  EV
Sbjct: 58  VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERKLEQNAH----SPVKAGEV 112

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
           +       +++ IE     D + EL  EVVR KYF MPP+++ EA++QL++VDHDF+ FR
Sbjct: 113 V-------QQETIEENLIGDRQPELPPEVVRMKYFGMPPMSIDEALEQLQLVDHDFFMFR 165

[41][TOP]
>UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142
           RepID=B1WZE1_CYAA5
          Length = 201

 Score =  117 bits (293), Expect = 7e-25
 Identities = 74/181 (40%), Positives = 106/181 (58%)
 Frame = -1

Query: 545 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 366
           S+KL+IQG N+++++++  +V  K+ + ++ +  L  +VDV LS     +  R     + 
Sbjct: 2   SMKLLIQGNNIDVTESINDYVTQKLEKAVKHYQTLTTKVDVHLSV---AKNARITNKHKA 58

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           EVT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KEK  +H    K  + +K  E
Sbjct: 59  EVTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNH----KPQSSVKNPE 113

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           V+        E EIE     D E  L  EV+R KYF MPP+++ EA  QLE+VDHDFY F
Sbjct: 114 VL-------PEREIEKDLIGDREAALPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYMF 166

Query: 5   R 3
           R
Sbjct: 167 R 167

[42][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
          Length = 215

 Score =  117 bits (292), Expect = 9e-25
 Identities = 71/182 (39%), Positives = 102/182 (56%), Gaps = 3/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 372
           +KL+IQG+N+E++D++ ++V  K+ + +     L  EVDV LS        R PR    +
Sbjct: 1   MKLVIQGKNIEITDSIHEYVNQKIEKAVNHFQQLTTEVDVHLSV------ARNPRINPKQ 54

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
             EVT+Y     V+RA+E +E  Y SIDLV+  I R+LRK KEK        K  + ++ 
Sbjct: 55  TAEVTIYANGT-VIRAQESSENLYASIDLVADKIARQLRKYKEKRQSKVNKTKTVDLIES 113

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
             V+  L               D + EL  EVVRTKYF MP +TV EA++QL+++DHDFY
Sbjct: 114 QPVVENLIG-------------DRQAELPSEVVRTKYFPMPSMTVEEALEQLQLIDHDFY 160

Query: 11  AF 6
            F
Sbjct: 161 MF 162

[43][TOP]
>UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa
           NIES-843 RepID=B0JSS1_MICAN
          Length = 199

 Score =  117 bits (292), Expect = 9e-25
 Identities = 72/179 (40%), Positives = 105/179 (58%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +KL+IQG N+ +++ +  +VE K+ + ++  + +  +VDV LS        R P   R E
Sbjct: 1   MKLLIQGNNIAVTEPIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHRAE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KE+  DH  +      +K SEV
Sbjct: 58  VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTNAP----VKTSEV 112

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           +       +E  ++ +   D   EL  EVVR KYF MPP+T+ EA+ QL++VDHDFY F
Sbjct: 113 V-------QEKPLDGSLIGDRTPELPAEVVRMKYFAMPPMTIEEALTQLQLVDHDFYMF 164

[44][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
           6803 RepID=LRTA_SYNY3
          Length = 191

 Score =  116 bits (290), Expect = 2e-24
 Identities = 71/180 (39%), Positives = 104/180 (57%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +KL+IQG N+ +++A+  +VE+KV R ++    L  +VDV LS        R     + E
Sbjct: 1   MKLLIQGNNITVTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSVARNA---RITNKHKAE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+Y     V+RA+E +E  Y SIDLV+  I R+LRK KE+  D     K    +K SE+
Sbjct: 58  VTVYANGT-VIRAQEGSENLYASIDLVADKIARQLRKYKERIQD-----KQHGNVKTSEI 111

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
           +       E+  +E     D   EL  EV+R KYF MPP+ + +A++QL++VDHDFY FR
Sbjct: 112 V-------EDKPVEENLIGDRAPELPSEVLRMKYFAMPPMAIEDALEQLQLVDHDFYMFR 164

[45][TOP]
>UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307
           RepID=A5GUZ2_SYNR3
          Length = 187

 Score =  114 bits (284), Expect = 8e-24
 Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 7/187 (3%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +KL+I GRN+E++ A++ + E K+ R +   + +V+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLEVTPALRDYTETKLSRAVSHFNGMVQEADVHLSV------ARNPRVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVTL+     V+RA+E ++  Y SIDLV+  + R+L++ K++   HG H          
Sbjct: 55  AEVTLFASGT-VIRAQERSQNLYASIDLVAGKLARQLQRHKDRRQGHGHH---------- 103

Query: 188 EVILPLPSEDEEDEIEITPQKDD-----EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVD 24
                    D + E E+ P + D       EL   VVR KYF MPP++V EAI QLE++D
Sbjct: 104 --------SDLQAEPEVMPLQGDMLQGRHAELPAPVVRRKYFAMPPMSVEEAIHQLEVID 155

Query: 23  HDFYAFR 3
           HDFY FR
Sbjct: 156 HDFYVFR 162

[46][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
          Length = 199

 Score =  113 bits (282), Expect = 1e-23
 Identities = 67/180 (37%), Positives = 107/180 (59%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +KL+IQG N+ +++A+  +V++K+ + ++    +  +VDV LS     + GR     + E
Sbjct: 1   MKLLIQGNNITVTEAIHDYVQEKLEKAVKHFQAITTKVDVHLSV---AKNGRVQNKHKAE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KE+  +     K  + +K  +V
Sbjct: 58  VTVYANG-AVIRAQEGSENLYASIDLVSDKIARQLRKYKERRLEQ----KAYSPVKTGDV 112

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
           +       ++  +E     D + EL  EVVR KYF MP +++ EA++QL++VDHDFY FR
Sbjct: 113 V-------QDQPVEGNLIGDRQPELPPEVVRMKYFAMPLMSIEEALEQLQLVDHDFYMFR 165

[47][TOP]
>UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110
           RepID=A3IRI7_9CHRO
          Length = 199

 Score =  113 bits (282), Expect = 1e-23
 Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 2/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +KL+IQG N+++++++  +V  K+ + ++ +     +VDV LS     +  R     + E
Sbjct: 1   MKLLIQGNNIDVTESINDYVTQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH--MKGPNRLKFS 189
           VT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KEK  +H     +K P+ L  +
Sbjct: 58  VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNHKPQSSVKSPDVLPET 116

Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
           EV        +ED I      D E EL  EV+R KYF MPP+++ EA  QLE+VDHDFY 
Sbjct: 117 EV--------KEDLIG-----DREVELPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYM 163

Query: 8   FR 3
           FR
Sbjct: 164 FR 165

[48][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
          Length = 224

 Score =  112 bits (281), Expect = 2e-23
 Identities = 68/181 (37%), Positives = 107/181 (59%), Gaps = 1/181 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +KL+IQG+N+E++DA++ HV  K+ +       L+ +VDV LS +        P+ +  E
Sbjct: 1   MKLVIQGKNIEITDAIRSHVHQKIEKATAHFQTLINKVDVCLSVQNNPRIA--PK-QTAE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT++   + VVRAEE +E+ Y SID+V+  + R+LRK KEK  D       P     ++V
Sbjct: 58  VTVFLN-NVVVRAEESSESLYASIDMVTDKLTRQLRKYKEKRRDQDHATVRP-----TDV 111

Query: 182 ILPLPSED-EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
              + + D      +I+   + + +L + VVR+KYF MPP+TV  A++ LE+V HDFY F
Sbjct: 112 DATINAPDITSHNADISEVLNHQPKLPDTVVRSKYFAMPPMTVQTALENLELVGHDFYMF 171

Query: 5   R 3
           R
Sbjct: 172 R 172

[49][TOP]
>UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT
          Length = 199

 Score =  112 bits (280), Expect = 2e-23
 Identities = 69/180 (38%), Positives = 107/180 (59%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +KL+IQG N+++++++  +V+ K+ + ++ +     +VDV LS     +  R     + E
Sbjct: 1   MKLLIQGNNIDVTESINDYVKQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KEK ++H    K  +  K  EV
Sbjct: 58  VTVYANGT-VIRAQEGSENLYASIDLVSDKISRQLRKYKEKVSNH----KPQSSAKLPEV 112

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
              LP ++  +++      D + EL  EV+R KYF MP +++ EA  QLE+VDHDFY FR
Sbjct: 113 ---LPEKEVSEDLI----GDRQAELPPEVIRMKYFAMPSMSIEEAKHQLELVDHDFYMFR 165

[50][TOP]
>UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803
           RepID=A5GJ89_SYNPW
          Length = 195

 Score =  112 bits (279), Expect = 3e-23
 Identities = 71/183 (38%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +KL+I GRN++++ A++ + E K+ R I     LV+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLDVTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     V+RA+E +E  Y SIDLV+S + R+LR+ K++ +DH  H  G    + S
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRFKDRHSDH-HHSHGH---RAS 109

Query: 188 EVILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
           E   P      +DE  +    D +E +L    VR KYF MPP+T+ +A  QL+++DHDFY
Sbjct: 110 ET--PTTESVLDDEAIVESLLDGKEVQLPSPGVRRKYFSMPPMTLEQARQQLDLIDHDFY 167

Query: 11  AFR 3
            FR
Sbjct: 168 LFR 170

[51][TOP]
>UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001
           RepID=B5IMZ9_9CHRO
          Length = 195

 Score =  112 bits (279), Expect = 3e-23
 Identities = 72/186 (38%), Positives = 103/186 (55%), Gaps = 6/186 (3%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 369
           +KL+I GRN+E++ A++++ E K+ R I     +V+E DV LS        R PR  +  
Sbjct: 1   MKLLIHGRNLEVTPAIREYTETKLTRAITHFEGMVKEADVHLSV------ARNPRVPQQI 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     V+RA+EH++  Y SIDLV+S + R+L + KE+   H RH    +R    
Sbjct: 55  AEVTMFANGT-VIRAQEHSDNLYASIDLVASKLTRQLNRYKERV--HERHQGPVHRSARD 111

Query: 188 E----VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 21
           E      LP P     D          E EL    VR KYF MPP+++ EA+ QLE++DH
Sbjct: 112 EEAGAASLPPPGSSLTD--------GKEPELPSRGVRRKYFAMPPMSLDEALHQLELIDH 163

Query: 20  DFYAFR 3
           DFY FR
Sbjct: 164 DFYVFR 169

[52][TOP]
>UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002
           RepID=LRTA_SYNP2
          Length = 193

 Score =  112 bits (279), Expect = 3e-23
 Identities = 71/179 (39%), Positives = 100/179 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +KL+IQG N+ +++++  +VE K+ +  +       +VDV LS        R     + E
Sbjct: 1   MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNA---RITDKHKAE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KEK      H++     K SEV
Sbjct: 58  VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQE----KTSEV 112

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           +        ED +      D   EL  EVVR KYF MPP+T+ EA++QL++VDHDFY F
Sbjct: 113 L-------PEDPVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMF 164

[53][TOP]
>UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
           CC9311 RepID=Q0ICJ8_SYNS3
          Length = 191

 Score =  111 bits (278), Expect = 4e-23
 Identities = 71/182 (39%), Positives = 104/182 (57%), Gaps = 2/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +KL+I GRN++++ A++++ E K+ R I     LV+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLDVTPALREYTETKLERAIHHFDDLVKEADVHLSV------ARNPRVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     V+RA+E +E  Y SIDLV+S + R+LR+ KE+ +DHG H   P      
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRFKERHSDHG-HRTTPTAAN-D 111

Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
            ++   P+ED   E         E +L    VR KYF MP +++ EA  QLE++DHDFY 
Sbjct: 112 VLLTERPTEDSLLE-------GKEAQLPSPGVRRKYFAMPAMSLEEARHQLELIDHDFYL 164

Query: 8   FR 3
           FR
Sbjct: 165 FR 166

[54][TOP]
>UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
           RepID=Q05SE1_9SYNE
          Length = 195

 Score =  110 bits (275), Expect = 9e-23
 Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +KL+I GRN+E++ A++++ E K+ R +Q +  +V E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLEVTAALREYTESKLERAVQHYDEMVVEADVHLSV------ARNPRVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKF 192
            EVT++     V+RA+E +E  Y SIDLV++ + R+LR+ KE+ +DH   H    +    
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVANKLSRQLRRYKERHSDHHHSHGHRASTTPT 113

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
           +E +L      ++  ++ +     E  L +  VR KYF MPP++V EA  QL+++DHDF+
Sbjct: 114 TEAVL------DDSAVDGSLLDGKEAHLPDPGVRRKYFPMPPMSVEEARHQLDLIDHDFF 167

Query: 11  AFR 3
            FR
Sbjct: 168 LFR 170

[55][TOP]
>UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
           RepID=A4CWK2_SYNPV
          Length = 195

 Score =  110 bits (275), Expect = 9e-23
 Identities = 71/183 (38%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +KL+I GRN++++ A++ + E K+ R I     LV+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLDVTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     V+RA+E +E  Y SIDLV+S + R+LR+ K++ +DH  H  G    K S
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRYKDRHSDH-HHSHGH---KAS 109

Query: 188 EVILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
           E   P      ++E  +    D +E +L    VR KYF MPP+T+ +A  QL+++DHDFY
Sbjct: 110 ET--PTTEAVLDNEAVVESLLDGKEVQLPSPGVRRKYFAMPPMTLEQARQQLDLIDHDFY 167

Query: 11  AFR 3
            FR
Sbjct: 168 VFR 170

[56][TOP]
>UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp.
           RS9917 RepID=A3ZA02_9SYNE
          Length = 195

 Score =  109 bits (273), Expect = 2e-22
 Identities = 68/182 (37%), Positives = 106/182 (58%), Gaps = 2/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +KL+I GRN+EL+ A++ + + K+ R +Q    +V+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLELTPALRDYTQSKLERAVQHFDDMVKEADVHLSV------ARNPRVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     V+RA+E +E  Y SIDLV+S + R+LR+ KE+ +DH  H    +R   +
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRFKERHSDH--HHSNGHRASET 111

Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
               P  +  +   I+ +     E +L +  VR KYF MPP+++ EA  QL+++DHDFY 
Sbjct: 112 P---PTDAIADAAPIDGSLLDGKEVQLPDPGVRRKYFAMPPMSLEEARHQLDVIDHDFYL 168

Query: 8   FR 3
           FR
Sbjct: 169 FR 170

[57][TOP]
>UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
           Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9
          Length = 195

 Score =  108 bits (270), Expect = 3e-22
 Identities = 69/183 (37%), Positives = 101/183 (55%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +K++I GRN+E++ A++++   K+ R        +RE DV LS        R PR   + 
Sbjct: 1   MKVLIHGRNLEITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     V+RA+E +E  Y SIDLV   + R+LRK KE+  DH  H  G      S
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHG-----HS 107

Query: 188 EVILPLPSE-DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
             + P   E  +E  +E +     E +L E  VR KYF MPP+T+ +A  QL+++DHDFY
Sbjct: 108 ASLTPSTEEVSDESAVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFY 167

Query: 11  AFR 3
            FR
Sbjct: 168 LFR 170

[58][TOP]
>UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9303 RepID=A2CBL6_PROM3
          Length = 195

 Score =  108 bits (269), Expect = 4e-22
 Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +KL+I GRN+EL+ A++++ + K+ R IQ    +V+E DV LS        R P    + 
Sbjct: 1   MKLLIHGRNLELTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLK 195
            EVT++     V+RA+E +E  Y SIDLV+S + R+LR+ KE+ +DH  H  G   +   
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTP 112

Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
            +E ++      +E  I+ +     E  L    VR KYF MPP++V +A  QL+++DHDF
Sbjct: 113 TTEAVI------DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARHQLDLIDHDF 166

Query: 14  YAFR 3
           Y FR
Sbjct: 167 YLFR 170

[59][TOP]
>UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N7A9_9CHLO
          Length = 245

 Score =  108 bits (269), Expect = 4e-22
 Identities = 72/198 (36%), Positives = 110/198 (55%), Gaps = 5/198 (2%)
 Frame = -1

Query: 581 ASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHS-YLVREVDVRLSTRG 405
           AS + +   P    K+I+QGR++E+++A++ + E K+ + +     + VREVDV  S R 
Sbjct: 33  ASGARAMAAPAKGTKVIVQGRHLEITEAIRDYCEQKINKAVSHFDMHDVREVDVTCSARS 92

Query: 404 GGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH- 228
             E  +G   +  +VT+YT R+GVVR+EE A+  Y SID VS  I+RKLRKIKEK+    
Sbjct: 93  --EKQQGGDLQMTQVTVYT-RNGVVRSEEEADNLYASIDAVSDKIERKLRKIKEKKNSKK 149

Query: 227 -GRHMKGPNRLKFSEVILPLPSEDE--EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTV 57
            G+    P + + ++++      DE   DEIE            EE V  KY  +   T 
Sbjct: 150 AGKTKANP-KAQTADIVAAAAEADEARADEIE-----------FEETVGVKYMAVKTSTA 197

Query: 56  FEAIDQLEMVDHDFYAFR 3
            EA +++E + H FYAF+
Sbjct: 198 MEAAEEMESLGHVFYAFK 215

[60][TOP]
>UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
           str. MIT 9313 RepID=Q7V8W0_PROMM
          Length = 195

 Score =  107 bits (267), Expect = 8e-22
 Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +KL+I GRN+EL+ A++++ + K+ R IQ    +V+E DV LS        R P    + 
Sbjct: 1   MKLLIHGRNLELTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLK 195
            EVT++     V+RA+E +E  Y SIDLV+S + R+LR+ KE+ +DH  H  G   +   
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTP 112

Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
            +E ++      +E  I+ +     E  L    VR KYF MPP++V +A  QL+++DHDF
Sbjct: 113 TTEAVI------DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARYQLDLIDHDF 166

Query: 14  YAFR 3
           Y FR
Sbjct: 167 YLFR 170

[61][TOP]
>UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE
          Length = 195

 Score =  107 bits (266), Expect = 1e-21
 Identities = 68/183 (37%), Positives = 101/183 (55%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +K++I GRN+E++ A++++   K+ R        +RE DV LS        R PR   + 
Sbjct: 1   MKVLIHGRNLEITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     V+RA+E +E  Y SIDLV   + R+LRK KE+  DH  H  G      S
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHG-----HS 107

Query: 188 EVILPLPSE-DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
             + P   E  +E  +E +     E +L E  VR KYF MPP+T+ +A  QL+++DHDFY
Sbjct: 108 ASLTPSTEEVSDESVVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFY 167

Query: 11  AFR 3
            F+
Sbjct: 168 LFK 170

[62][TOP]
>UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102
           RepID=Q7U8F3_SYNPX
          Length = 195

 Score =  106 bits (265), Expect = 1e-21
 Identities = 65/183 (35%), Positives = 104/183 (56%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +KL+I GRN+E++ A++ + + K+ R        VRE DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLEITPALRDYTQTKLERATHHFGNAVREADVHLSV------ARNPRVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKF 192
            EVT++     V+RA+E +E  Y SIDL +S + R+LR+ KE+ +DH   H    +    
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLAASKLARQLRRWKERHSDHHHSHGHSASTTPA 113

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
           +E +       ++ +++ +  +  E EL +  VR KYF MPP+++ EA  QL+++DHDFY
Sbjct: 114 TEAVT------DDSQVDGSLLQGREAELPDPGVRRKYFAMPPMSLEEARRQLDLIDHDFY 167

Query: 11  AFR 3
            FR
Sbjct: 168 LFR 170

[63][TOP]
>UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str.
           AS9601 RepID=A2BPM8_PROMS
          Length = 194

 Score =  106 bits (265), Expect = 1e-21
 Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 4/184 (2%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +K++I G+N+EL+ A+K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLK 195
            EVT++     V+RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H +  K  + L 
Sbjct: 55  AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL- 112

Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
                 P+ S +     +   ++  E  L E  ++ KYF+M P++  EA  QL+++DHDF
Sbjct: 113 ------PIESMESNFLDKALFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDF 166

Query: 14  YAFR 3
           Y FR
Sbjct: 167 YVFR 170

[64][TOP]
>UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9301 RepID=A3PBB8_PROM0
          Length = 194

 Score =  106 bits (264), Expect = 2e-21
 Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 4/184 (2%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +K++I G+N+EL+ A+K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLK 195
            EVT++     V+RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H +  K  + L 
Sbjct: 55  AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL- 112

Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
                 P+ S +     +   ++  E  L E  ++ KYF+M P++  EA  QL+++DHDF
Sbjct: 113 ------PIESMESNFLDKAFFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDF 166

Query: 14  YAFR 3
           Y FR
Sbjct: 167 YVFR 170

[65][TOP]
>UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus
           marinus clone HF10-88F10 RepID=Q1PJW9_PROMA
          Length = 194

 Score =  105 bits (263), Expect = 2e-21
 Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +K++I G+N+EL+ A+K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLK 195
            EVT++     V+RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H    K  N+  
Sbjct: 55  AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNNQFK--NKES 111

Query: 194 FSEVILPLPSEDEEDEI--EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 21
           F       PSE+ E     E   +   E  L E  ++ KYF+M P++  EA  QL+++DH
Sbjct: 112 F-------PSENTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDH 164

Query: 20  DFYAFR 3
           DFY FR
Sbjct: 165 DFYVFR 170

[66][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
          Length = 207

 Score =  105 bits (262), Expect = 3e-21
 Identities = 67/181 (37%), Positives = 105/181 (58%), Gaps = 1/181 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +KL++QG N++++ A+  +V+ K+ + +  +   + E+DV LS     +  +    +  E
Sbjct: 1   MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+Y     V+RAEE  E  Y SIDLVS  I R+L+K KEK  D     KG  +L  +E 
Sbjct: 58  VTIYANGT-VIRAEECNENLYASIDLVSDKITRQLKKYKEKLRDR----KG--QLSTAET 110

Query: 182 ILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                ++   D   +T   +  + EL +++VRTKYF MP +TV +A+ QL++VDHDFY F
Sbjct: 111 -----ADQLSDGALVTDLLNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMF 165

Query: 5   R 3
           R
Sbjct: 166 R 166

[67][TOP]
>UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC
          Length = 195

 Score =  105 bits (261), Expect = 4e-21
 Identities = 65/183 (35%), Positives = 102/183 (55%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +KL+I GRN+E++ A++ + + K+ R        VRE DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLEITPALRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKF 192
            EVT++     V+RA+E +E  Y SIDL +  + R+LR+ KE+ +DH   H    +    
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPS 113

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
           ++V+      ++   +E +  +  E EL +  VR KYF MPP+ + EA  QL+++DHDFY
Sbjct: 114 TDVV------NDASPVEASLLQGREAELPDPGVRRKYFAMPPMGLEEARRQLDLIDHDFY 167

Query: 11  AFR 3
            FR
Sbjct: 168 LFR 170

[68][TOP]
>UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. NATL1A RepID=A2C0K6_PROM1
          Length = 194

 Score =  104 bits (260), Expect = 5e-21
 Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +KL+I GRN+EL+ +++ + + K+ +       +V+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLELTPSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     V+RA+E +E  Y SIDLV++ + R+LRK KE+   H  H     +   +
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHNNQSTKSVQN 113

Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
           E I    S D       +  +  E  L    VR KYF+M P+T+ +A  QL+++DHDFY 
Sbjct: 114 EKIENFSSSDH------SLIEGKEPHLPNPGVRRKYFEMDPMTIEQARVQLDLIDHDFYL 167

Query: 8   FR 3
           FR
Sbjct: 168 FR 169

[69][TOP]
>UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH
           5701 RepID=A3YVD7_9SYNE
          Length = 195

 Score =  104 bits (260), Expect = 5e-21
 Identities = 65/186 (34%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 369
           +KL+I GRN++++ A++ + E K+GR I  +  LV+E DV LS        R PR  +  
Sbjct: 1   MKLLIHGRNLDVTPAIRDYTEAKLGRAINHYEGLVKEADVHLSV------ARNPRVAQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     V+RA+E +E  Y SID+V+  + R+LR+ K++ ++H       N     
Sbjct: 55  AEVTVFANGV-VIRAQERSENLYASIDMVAGKLSRQLRRYKDRLSNHHGAGSPAN----- 108

Query: 188 EVILPLPSEDEEDEIE-ITPQK---DDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 21
                +  + E+  +E + P     D E  L    VR KYF MP +++ +A+ QLE++DH
Sbjct: 109 -----VGDDTEQPSLEGVLPNDLIGDREPALPVPAVRRKYFSMPAMSLDQALHQLELIDH 163

Query: 20  DFYAFR 3
           DFY FR
Sbjct: 164 DFYVFR 169

[70][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
           PCC 6301 RepID=Q5N179_SYNP6
          Length = 207

 Score =  103 bits (258), Expect = 8e-21
 Identities = 66/181 (36%), Positives = 105/181 (58%), Gaps = 1/181 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +KL++QG N++++ A+  +V+ K+ + +  +   + E+DV LS     +  +    +  E
Sbjct: 1   MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+Y     V+RAEE  E  Y SIDLVS  I R+L+K KE+  D     KG  +L  +E 
Sbjct: 58  VTIYANGT-VIRAEECNENLYASIDLVSDKITRQLKKYKEELRDR----KG--QLSTAET 110

Query: 182 ILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                ++   D   +T   +  + EL +++VRTKYF MP +TV +A+ QL++VDHDFY F
Sbjct: 111 -----ADQLSDGALVTDLLNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMF 165

Query: 5   R 3
           R
Sbjct: 166 R 166

[71][TOP]
>UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9515 RepID=A2BV60_PROM5
          Length = 194

 Score =  103 bits (257), Expect = 1e-20
 Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +K++I G+N+EL+ A+K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNIELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRLSYQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     ++RAEE  E  Y SIDLVS+ + RKLRK KE+   +  +    N+  F+
Sbjct: 55  AEVTIFASGT-IIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHYKNLNYNLEKNKHSFT 113

Query: 188 EVILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
                  + +  D I+     D  E +L E  ++ KYF+M P+++ EA  QL+++DHDFY
Sbjct: 114 N------TNEHLDSIDKNIFNDKREAKLPEPSIKNKYFEMIPISLEEARKQLDLIDHDFY 167

Query: 11  AFR 3
            FR
Sbjct: 168 VFR 170

[72][TOP]
>UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
           subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP
          Length = 194

 Score =  103 bits (256), Expect = 1e-20
 Identities = 63/183 (34%), Positives = 102/183 (55%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +K++I G+N+EL+  +K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNLELTGPLKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     ++RAEE  E  Y SIDLVS+ + RKLRK KE+      +    N+  +S
Sbjct: 55  AEVTIFANGT-IIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHNKKLHNNLVKNKNSYS 113

Query: 188 EVILPLPSEDEEDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
             I      +E D I+     ++ E  L E  ++ KYF+M P+++ EA  QL+ +DHDFY
Sbjct: 114 NAI------EESDSIDKDIFNEEREVRLPEPSIKKKYFEMIPISLEEARKQLDFIDHDFY 167

Query: 11  AFR 3
            FR
Sbjct: 168 LFR 170

[73][TOP]
>UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str.
           MIT 9215 RepID=A8G3B2_PROM2
          Length = 194

 Score =  103 bits (256), Expect = 1e-20
 Identities = 65/183 (35%), Positives = 103/183 (56%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +K++I G+N+EL+ A+K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     V+RAEE  E  Y SIDLVS+ + RKLRK KE+      + +  N+  F 
Sbjct: 55  AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF- 112

Query: 188 EVILPLPSEDEEDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
                L ++ E   ++    KD  E  L E  ++ KYF+M P++  EA  QL+++DHDFY
Sbjct: 113 -----LIADTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFY 167

Query: 11  AFR 3
            FR
Sbjct: 168 VFR 170

[74][TOP]
>UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured
           Prochlorococcus marinus clone ASNC2259
           RepID=Q1PKX8_PROMA
          Length = 194

 Score =  103 bits (256), Expect = 1e-20
 Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 4/184 (2%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +K++I G+N+EL+ A+K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLK 195
            EVT++     V+RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H +  K  + L 
Sbjct: 55  AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL- 112

Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
                 P+ S +     +    +  E  L +  ++ KYF+M P++  EA  QL+++DHDF
Sbjct: 113 ------PIESMESNFLDKAFFIEGTEASLPKPSIKNKYFEMTPISSDEARKQLDLIDHDF 166

Query: 14  YAFR 3
           Y FR
Sbjct: 167 YVFR 170

[75][TOP]
>UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT
           9202 RepID=B9P0E9_PROMA
          Length = 194

 Score =  103 bits (256), Expect = 1e-20
 Identities = 63/182 (34%), Positives = 100/182 (54%), Gaps = 2/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +K++I G+N+EL+ A+K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     V+RAEE  E  Y SIDLVS+ + RKLRK KE+      + +  N+  F 
Sbjct: 55  AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF- 112

Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
               P+   +     E   +   E  L E  ++ KYF+M P++  EA  QL+++DHDFY 
Sbjct: 113 ----PIADTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYV 168

Query: 8   FR 3
           FR
Sbjct: 169 FR 170

[76][TOP]
>UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Prochlorococcus marinus str. NATL2A
           RepID=Q46H11_PROMT
          Length = 194

 Score =  102 bits (255), Expect = 2e-20
 Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 2/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +KL+I GRN+EL+ +++ + + K+ +       +V+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLELTQSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     V+RA+E +E  Y SIDLV++ + R+LRK KE+   H  H     +   +
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHHNQSTKSVQN 113

Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
           E      S D      +T  K  E  L    VR KYF+M P+ + +A  QL+++DHDFY 
Sbjct: 114 EDTQNFSSSDH----SLTEGK--EPHLPSPGVRRKYFEMTPMNIEQARVQLDLIDHDFYL 167

Query: 8   FR 3
           FR
Sbjct: 168 FR 169

[77][TOP]
>UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109
           RepID=D0CH01_9SYNE
          Length = 195

 Score =  102 bits (254), Expect = 2e-20
 Identities = 63/183 (34%), Positives = 102/183 (55%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +KL+I GRN+E++ +++ + + K+ R        VRE DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLEITPSLRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKF 192
            EVT++     V+RA+E +E  Y SIDL +  + R+LR+ KE+ +DH   H    +    
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPS 113

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
           ++V+      ++   +E +  +  E EL +  VR KYF MPP+ + +A  QL+++DHDFY
Sbjct: 114 TDVV------NDASPVESSLLQGREAELPDPGVRRKYFAMPPMGLEDARRQLDLIDHDFY 167

Query: 11  AFR 3
            FR
Sbjct: 168 LFR 170

[78][TOP]
>UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus
           RepID=Q7VDH9_PROMA
          Length = 195

 Score =  101 bits (251), Expect = 5e-20
 Identities = 64/183 (34%), Positives = 105/183 (57%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 369
           +K++I GRN+EL+ A++++ + K+ + I     +V+E DV LS        + PR   + 
Sbjct: 1   MKVLIHGRNLELTPALREYTKSKLEKAIHHFGDMVKEADVHLSV------AKNPRVPQQT 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     V+RA+E ++  Y SIDLVS+ + R+LR+ KE+ +DH  H  G       
Sbjct: 55  AEVTVFANGT-VIRAQERSQNLYASIDLVSNKLCRQLRRYKERHSDH-HHSPG-----HR 107

Query: 188 EVILPLPSEDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
             I P   E  ED+ I  +  +  E +L +  +R KYF M P+ + +A  QL+++DHDFY
Sbjct: 108 ASITPTTEEVLEDKSINGSLVEGKEAKLPKPGIRRKYFPMHPMNIEQAQHQLDLIDHDFY 167

Query: 11  AFR 3
            F+
Sbjct: 168 LFK 170

[79][TOP]
>UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
           Tax=Prochlorococcus marinus str. MIT 9312
           RepID=Q31CD8_PROM9
          Length = 194

 Score =  100 bits (250), Expect = 7e-20
 Identities = 62/180 (34%), Positives = 98/180 (54%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K++I G+N+EL+ A+K++ + K+ +    +  +V+E D+ LS     E       +  E
Sbjct: 1   MKILIHGKNLELTGALKEYTQAKIEKATHHYKDIVKEADIHLSI----EKNPSVSLQTAE 56

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT++     V+RAEE  E  Y SIDLVS+ + RKLRK KE+        +  N   F   
Sbjct: 57  VTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNYKTNYINQFKNNESF--- 112

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
             P+ S D     +   ++  E  L E  ++ KYF+M P++  EA  QL+++DHDFY FR
Sbjct: 113 --PIESADSNVLDKTLFKQGREASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFR 170

[80][TOP]
>UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9211 RepID=A9BE19_PROM4
          Length = 197

 Score =  100 bits (250), Expect = 7e-20
 Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 369
           +KL+I GRN+EL+ +++++ + K+ + I     +V+E DV LS        + P   +  
Sbjct: 1   MKLLIHGRNLELTPSLREYTQSKLEKAIHHFDGIVQEADVHLS------IAKNPSVPQQI 54

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EVT++     V+RA+E ++  Y SIDLV++ + R+LRK KE+ +DH  H  G      S
Sbjct: 55  AEVTVFANGT-VIRAQERSQNLYASIDLVATKLCRQLRKYKERHSDH-HHSHG-----HS 107

Query: 188 EVILPLPSEDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
             + P      ED+ I+ +  +  E  L    +R KYF MPP++  +A  QL+++DHDFY
Sbjct: 108 ASLTPTTEAVVEDKAIDSSLIQGKEAHLPTPGIRRKYFSMPPMSTEQARHQLDLIDHDFY 167

Query: 11  AFR 3
            F+
Sbjct: 168 MFK 170

[81][TOP]
>UniRef100_Q5MCR1 Chloroplast-specific ribosome-associated protein n=1 Tax=Volvox
           carteri f. nagariensis RepID=Q5MCR1_VOLCA
          Length = 232

 Score = 98.2 bits (243), Expect = 5e-19
 Identities = 46/109 (42%), Positives = 75/109 (68%)
 Frame = -1

Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR 369
           S+V++IIQGR + +++A+K++VE+KV + IQ  ++ ++EVDV LS RGG     G + ++
Sbjct: 72  STVRIIIQGRKLPVTNAIKEYVEEKVAKAIQNFAHTLKEVDVTLSARGGDTGTHGKKEQK 131

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 222
            +VT++T R+GVVR E+     Y +IDLV   I+ KL ++KEK    G+
Sbjct: 132 VDVTIFTLRNGVVRVEDRESNLYAAIDLVCDKIRSKLTRVKEKAITKGK 180

[82][TOP]
>UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI
          Length = 187

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 64/183 (34%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 369
           ++  I G+N+E+++ ++ +V  K+ +V      L   VDV LS        R PR  R  
Sbjct: 1   MQFAIHGKNIEVTEPIRDYVSSKLDKVFAHFDQLTMGVDVYLSV------ARNPRISRSH 54

Query: 368 -CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
             EVT+      ++RAEE  E  Y SIDLV+  + R++RK KE+     +   G      
Sbjct: 55  SAEVTVQASGT-IIRAEEETENLYASIDLVADKLHRQMRKYKERMQKKPKPKTG--LAVA 111

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
           ++  + LP+ DE+              L +EVVRTKYF MPP++  EA+D L +VDHDF+
Sbjct: 112 NQAPISLPNGDEK-----------ATALPKEVVRTKYFAMPPMSPEEALDHLALVDHDFF 160

Query: 11  AFR 3
            FR
Sbjct: 161 VFR 163

[83][TOP]
>UniRef100_C1CWW9 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Deinococcus deserti VCD115 RepID=C1CWW9_DEIDV
          Length = 188

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 61/175 (34%), Positives = 97/175 (55%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           + GRN+E+SDA++ +V++K+ R + +++  + +  V L+ R   + GR     R EV L 
Sbjct: 6   LSGRNVEVSDAMRDYVQEKLTR-LDRYNDQITDARVTLTVRDVRDAGR---RNRVEVQLN 61

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
              +G++RAEEH    Y +ID  S +++R+LRK K       R+MK     +   V  P 
Sbjct: 62  VP-NGIIRAEEHHSDMYAAIDKASDVLERQLRKFKT------RYMKQ----RHETVPQPG 110

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           P   E D   +    DD  E + E+VR K FDM P++  +A+ Q+E + HDFY F
Sbjct: 111 PGPAEAD---VNAGLDDVSEFMPEIVRQKRFDMRPMSPEDAVTQMEALGHDFYVF 162

[84][TOP]
>UniRef100_B9I261 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I261_POPTR
          Length = 118

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 49/86 (56%), Positives = 60/86 (69%)
 Frame = -1

Query: 263 KLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTK 84
           KLRKIK+KE+DHGRHMKG N+LK  E   P+  E E     ++ +KDD+   ++E V TK
Sbjct: 28  KLRKIKDKESDHGRHMKGFNKLKVRE---PMSQEVENVADTVSQRKDDDN--LDEAVHTK 82

Query: 83  YFDMPPLTVFEAIDQLEMVDHDFYAF 6
           YFDMPPLTV EAI +L  VDH FY F
Sbjct: 83  YFDMPPLTVHEAIVRLGNVDHAFYGF 108

[85][TOP]
>UniRef100_Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Deinococcus geothermalis DSM 11300
           RepID=Q1IYK5_DEIGD
          Length = 186

 Score = 91.3 bits (225), Expect = 6e-17
 Identities = 59/176 (33%), Positives = 94/176 (53%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           + GRN++++DA++ +VE+K+ R + + S  + +  V L+ R   + GR     R EV L 
Sbjct: 6   LSGRNVDVTDAMRDYVEEKLTR-LDRFSDQITDARVVLTVRDVRDAGR---RNRVEVQLN 61

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
              +G++RAEEH    Y +ID  S +++R+LRK K K   H +    P          P 
Sbjct: 62  VP-NGIIRAEEHHADMYAAIDRASDVLERQLRKFKTKYLRHRQEAAPP----------PQ 110

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
           P   E D         D+ E   E+VRTK FD+ P++  +A+ Q+E + HDFY F+
Sbjct: 111 PGLAEAD----VNAGLDDTEFRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYVFK 162

[86][TOP]
>UniRef100_C2D8Z3 Possible ribosome-associated inhibitor A n=1 Tax=Atopobium vaginae
           DSM 15829 RepID=C2D8Z3_9ACTN
          Length = 192

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 59/175 (33%), Positives = 85/175 (48%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           I GR + +SDA++ HV+ KVG  ++         DV L           P  + CEVT+Y
Sbjct: 6   ISGRKVSVSDALRDHVQHKVGDALKVFDITPMSCDVVLRVDKNHS---NPDRKTCEVTVY 62

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
             R+ VVR E  +E  Y +ID  S  + R+LRK K +  D  +  + P          P 
Sbjct: 63  V-RNNVVRVEASSEDMYAAIDAASDKVTRQLRKYKTRIIDRKQRSQAP---------APA 112

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           PS+D  D I+     D        +VR KY D+ P+T  EA+ Q +++ HDFY F
Sbjct: 113 PSKDLSDLIDEVADDD-------MLVREKYIDLHPMTEEEALVQTDLIGHDFYVF 160

[87][TOP]
>UniRef100_Q9RVE7 Protein DR_1082 n=1 Tax=Deinococcus radiodurans RepID=UA82_DEIRA
          Length = 191

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 57/176 (32%), Positives = 97/176 (55%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           + GRN+E+++ ++++VE+K+ R + +++  + +  V L+ R   +     R  R EV L 
Sbjct: 6   LSGRNVEVTEPMREYVEEKLSR-LDRYTDQITDARVTLTVR---DVRNNERRNRVEVQLN 61

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
               G++RAEEH    Y +ID  S +++R+LRK K       R+MK   R +     LP 
Sbjct: 62  VPG-GIIRAEEHHADMYAAIDKASDVLERQLRKFKT------RYMK--QRQEGRPEPLPG 112

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
           P+E E +        DD  E   E+VR K F++ P++  +A+ Q+E + HDFY F+
Sbjct: 113 PAEAEVNAQGSGAAMDDVSEFHPEIVRQKRFELRPMSAEDAVVQMEALGHDFYVFQ 168

[88][TOP]
>UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
           RepID=B0P2P9_9CLOT
          Length = 179

 Score = 87.8 bits (216), Expect = 6e-16
 Identities = 61/185 (32%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
 Frame = -1

Query: 551 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVRE--VDVRLSTRGGGEFGRGPR 378
           + ++K II G+N+E+++ +K  +E+K+GR+     YLV +  V+V LS + G +      
Sbjct: 1   MGAMKFIISGKNIEVTEGIKAAIEEKLGRL---DKYLVDDTIVNVTLSVQKGRQ------ 51

Query: 377 TRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 198
             + EVT+  K H ++RAEE +E  Y SIDLV  +I+R++R+ K +  +           
Sbjct: 52  --KIEVTIPMKGH-IIRAEEGSEDMYVSIDLVVDVIERQIRRYKTRLMNQ---------- 98

Query: 197 KFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHD 18
           K+          ++ED++E     DDE  +I    R+K F + P+ V EA  Q+E++ HD
Sbjct: 99  KYDGTSFKQEFMEQEDDVE-----DDEIRII----RSKKFAIKPMDVEEACVQMELLGHD 149

Query: 17  FYAFR 3
           F+ FR
Sbjct: 150 FFVFR 154

[89][TOP]
>UniRef100_C8W7H2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Atopobium parvulum DSM 20469 RepID=C8W7H2_ATOPD
          Length = 196

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 58/179 (32%), Positives = 91/179 (50%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           V + I GR + +S+A++ HV+ K+G  ++         DV L           P  +  E
Sbjct: 2   VDIKISGRKVSISEALRAHVDQKIGDALKVFDITPMSCDVVLRVDKNPS---NPDRKTTE 58

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT++  R+ VVR    ++  Y +ID  +  + R+LRK K K  +   HMK       SE 
Sbjct: 59  VTVFV-RNNVVRVTASSDDMYAAIDEAADKVSRQLRKYKTKVVERRHHMK-------SER 110

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            + L  ED  + IEI       E+L +++VR KY D+ P+T  EA+ Q +++ HDFY F
Sbjct: 111 GIALTQEDLANLIEIPA-----EDLDDQLVREKYVDLEPMTEEEALVQTDLLGHDFYVF 164

[90][TOP]
>UniRef100_B9I248 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I248_POPTR
          Length = 115

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 51/101 (50%), Positives = 61/101 (60%), Gaps = 14/101 (13%)
 Frame = -1

Query: 266 RKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDE--EELI---- 105
           RKLRKIK+KE+DHGRHMKG N+LK  E   P+    E D   ++ +KDD+  +EL     
Sbjct: 8   RKLRKIKDKESDHGRHMKGFNKLKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHL 64

Query: 104 --------EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                      V TKYFDMPPLTV EAI +L  VDH FY F
Sbjct: 65  VTIHSIISSNAVHTKYFDMPPLTVDEAIVRLGNVDHAFYGF 105

[91][TOP]
>UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
           16795 RepID=B0A7Y1_9CLOT
          Length = 187

 Score = 85.1 bits (209), Expect = 4e-15
 Identities = 60/180 (33%), Positives = 96/180 (53%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K++I G+ +EL+D +K  VEDK+ + + ++ +   EV V +S R   +        + E
Sbjct: 7   MKILITGKKIELTDGIKGAVEDKLSK-LDRYLHEDTEVKVTVSARKAKQ--------KIE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+      ++RAE+  E  Y +ID+V   + ++LR+ K K       +KG  + K  E 
Sbjct: 58  VTIIPINGPIIRAEDSEENLYAAIDVVYDKLNKQLRRYKNK-------LKGKYQSKGQES 110

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
           I     ED   E      KD E +++ E  R K FDM P++  EA+ Q+E+V HDFY FR
Sbjct: 111 IRFQNIEDNAAE-----DKDGEFDIVIE--RHKKFDMKPMSPEEAVLQMELVGHDFYMFR 163

[92][TOP]
>UniRef100_C8WMZ8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Eggerthella lenta DSM 2243 RepID=C8WMZ8_9ACTN
          Length = 191

 Score = 84.3 bits (207), Expect = 7e-15
 Identities = 57/181 (31%), Positives = 99/181 (54%), Gaps = 2/181 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRGPRTRR 369
           + + + GR M ++DA++++ E+K+G  ++      LV E+ + +           PR   
Sbjct: 1   MSITVTGRKMPVTDALREYAEEKIGNSMKVMDIDPLVAEIVLFVEKNPAN-----PRPAV 55

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
           CEVTL TK H ++R EEH E  Y +ID+ ++ + R+LRK K K  D  R ++  +     
Sbjct: 56  CEVTLRTKGH-IIRVEEHEEDMYAAIDVAAAKVVRQLRKYKTKVVD--RKLRAAD----- 107

Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
           E I   PS   E +++   Q+  +    +EVVR K  +  PLT  EA+ +++++ HDF+A
Sbjct: 108 ETIRIEPSAAGELDVDGLMQELSD----DEVVRVKTIEFEPLTEEEALVKIDLLGHDFFA 163

Query: 8   F 6
           +
Sbjct: 164 Y 164

[93][TOP]
>UniRef100_C4V4X1 Ribosome-associated inhibitor A n=1 Tax=Selenomonas flueggei ATCC
           43531 RepID=C4V4X1_9FIRM
          Length = 181

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 1/177 (0%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           I+G+N+E++ A++ +VE +VG+ I K+   V E+ V LS  G        +  + EVT  
Sbjct: 6   IRGKNVEVTPALRDYVEKRVGK-ITKYFDNVGEIAVLLSVEG--------KHHKVEVTAP 56

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-P 174
             R  ++R EEH+E  Y SIDLV   ++R++RK K K     R  +G  + +  E    P
Sbjct: 57  VARGILLRGEEHSEDMYSSIDLVIEKLERQIRKQKTKLAR--RFRQGGFKAEAVETFAQP 114

Query: 173 LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
           +P EDE                +  VV+TK F + P+ V EAI Q+ +++H F+ FR
Sbjct: 115 IPEEDE----------------LYPVVKTKRFTLQPMDVQEAIMQMNLLNHHFFVFR 155

[94][TOP]
>UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile
           QCD-23m63 RepID=UPI00017F5F53
          Length = 183

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 52/180 (28%), Positives = 100/180 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           + +II G+ +EL+DA+K  +E K+ ++    +Y+  + DV+++        R  R ++ E
Sbjct: 1   MNIIISGKQIELTDAIKNKIESKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+ T    ++RAE+  E  Y +ID+V   + ++L+K K++  D  +  K    ++F + 
Sbjct: 52  VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDA 108

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
            + L  E E+         D+ +EL+  + R K F + P++  EA+ Q+E++ HDFY F+
Sbjct: 109 EINLADEQED-------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159

[95][TOP]
>UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630
           RepID=Q18CN1_CLOD6
          Length = 183

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 52/180 (28%), Positives = 100/180 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           + +II G+ +EL+DA+K  +E K+ ++    +Y+  + DV+++        R  R ++ E
Sbjct: 1   MNIIISGKQIELTDAIKNKIETKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+ T    ++RAE+  E  Y +ID+V   + ++L+K K++  D  +  K    ++F + 
Sbjct: 52  VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDA 108

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
            + L  E E+         D+ +EL+  + R K F + P++  EA+ Q+E++ HDFY F+
Sbjct: 109 EINLADEQED-------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159

[96][TOP]
>UniRef100_C2KX79 Ribosome-associated inhibitor A n=1 Tax=Oribacterium sinus F0268
           RepID=C2KX79_9FIRM
          Length = 176

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 60/180 (33%), Positives = 93/180 (51%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K+ I GRN+ L+D +K  VE K+G+ + K        +V LST+           ++ E
Sbjct: 1   MKITITGRNLSLTDGLKNGVEKKLGK-LDKFFQAETPCNVTLSTQKD--------MQKIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K   V+RAEE     Y SIDLV  +++R++RK K K     RH            
Sbjct: 52  VTIPVKG-SVIRAEEATPDMYQSIDLVVDVLERQIRKYKNKLIQ--RHQAA--------- 99

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
                S+   + IE  P +D+EE    ++VRTK+ D+ P+T  EA  Q+E++ H F+ F+
Sbjct: 100 -----SDFSSEFIEEKPAQDEEEI---KIVRTKHIDLKPMTAEEACLQMELLGHSFFVFQ 151

[97][TOP]
>UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile
           RepID=C9XIR4_CLODI
          Length = 183

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 52/180 (28%), Positives = 100/180 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           + +II G+ +EL+DA+K  +E K+ ++    +Y+  + DV+++        R  R ++ E
Sbjct: 1   MNIIISGKQIELTDAIKNKIETKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+ T    ++RAE+  E  Y +ID+V   + ++L+K K++  D  +  K    ++F + 
Sbjct: 52  VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDS 108

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
            + L  E E+         D+ +EL+  + R K F + P++  EA+ Q+E++ HDFY F+
Sbjct: 109 EINLADEQED-------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFK 159

[98][TOP]
>UniRef100_Q9CHS8 Putative uncharacterized protein ygdA n=1 Tax=Lactococcus lactis
           subsp. lactis RepID=Q9CHS8_LACLA
          Length = 185

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 55/179 (30%), Positives = 94/179 (52%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++DA++ +VEDK+G+ + K+     EV   ++ +   E     +  + E
Sbjct: 2   IKFNIRGENVEVTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYSE-----KRAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VTL  K +  +RAE+ ++  Y SID V   ++R++RK K +     R+   P    F + 
Sbjct: 56  VTLPAK-NVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQAFGDE 113

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
             PL   DE  E  +            ++VRTK+  + P+   EA+ Q++M+ HDFY F
Sbjct: 114 FAPLEKADEVAEDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVF 160

[99][TOP]
>UniRef100_Q3CZ63 Ribosomal subunit interface protein n=6 Tax=Streptococcus
           agalactiae RepID=Q3CZ63_STRAG
          Length = 184

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 57/179 (31%), Positives = 101/179 (56%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++++VE K+ +V +K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKYSIRGENIEVTEAIREYVETKLSKV-EKYFNEAQELDTRVNLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R      ++  S+V
Sbjct: 56  VTILIDSI-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQV 109

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                      E E  P   DEE + + +VRTK  ++ P+ V EA+ Q+E++ HDF+ +
Sbjct: 110 FTT--------EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIY 157

[100][TOP]
>UniRef100_Q030Z0 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Lactococcus lactis subsp. cremoris SK11
           RepID=Q030Z0_LACLS
          Length = 185

 Score = 81.3 bits (199), Expect = 6e-14
 Identities = 55/179 (30%), Positives = 95/179 (53%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++DA++ +VEDK+G+ + K+     EV   ++ +   E     +  + E
Sbjct: 2   IKFNIRGENVEVTDAIRDYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTE-----KRAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VTL  K +  +RAE+ ++  Y SID V   ++R++RK K +     R+   P    F + 
Sbjct: 56  VTLPAK-NVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQVFGDE 113

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
             PL + DE  E  +            ++VRTK+  + P+   EA+ Q++M+ HDFY F
Sbjct: 114 FAPLDTTDEVAEDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVF 160

[101][TOP]
>UniRef100_A2RIX0 Putative Sigma 54 modulation protein n=2 Tax=Lactococcus lactis
           RepID=A2RIX0_LACLM
          Length = 185

 Score = 80.9 bits (198), Expect = 8e-14
 Identities = 55/179 (30%), Positives = 95/179 (53%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++DA++ +VEDK+G+ + K+     EV   ++ +   E     +  + E
Sbjct: 2   IKFNIRGENVEVTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTE-----KRAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VTL  K +  +RAE+ ++  Y SID V   ++R++RK K +     R+   P    F + 
Sbjct: 56  VTLPAK-NVTLRAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQVFGDE 113

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
             PL + DE  E  +            ++VRTK+  + P+   EA+ Q++M+ HDFY F
Sbjct: 114 FAPLDTTDEVAEDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVF 160

[102][TOP]
>UniRef100_Q3DA79 Ribosomal subunit interface protein n=2 Tax=Streptococcus
           agalactiae RepID=Q3DA79_STRAG
          Length = 184

 Score = 80.9 bits (198), Expect = 8e-14
 Identities = 57/179 (31%), Positives = 101/179 (56%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++++VE K+ +V +K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKYSIRGENIEVTEAIREYVETKLSKV-EKYFNEEQELDTRVNLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R      ++  S+V
Sbjct: 56  VTILIDSI-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQV 109

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                      E E  P   DEE + + +VRTK  ++ P+ V EA+ Q+E++ HDF+ +
Sbjct: 110 FTT--------EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIY 157

[103][TOP]
>UniRef100_B1SBZ3 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius
           subsp. infantarius ATCC BAA-102 RepID=B1SBZ3_9STRE
          Length = 182

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 53/179 (29%), Positives = 100/179 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  ++G N+E++DA++ +VE K+G+ I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKYSVRGENIEVTDAIRNYVESKLGK-IEKYFNAEQELDARVNLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV+  I+R++RK K K     R     +++     
Sbjct: 56  VTILVNSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIAKKHREKVPASQI----- 109

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                SE E + ++  P  +        VVRTK+  + P+ + EA+ Q++++ HDF+ +
Sbjct: 110 ---FTSEFEAEPVDEGPAVN--------VVRTKHVSLKPMDLDEALLQMDLLGHDFFIY 157

[104][TOP]
>UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
           13275 RepID=B6FVY1_9CLOT
          Length = 194

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 2/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +KL I G+ MEL+  +K ++E K+ ++     Y+  + DV+++     + GR     + E
Sbjct: 9   MKLTISGKQMELTQGIKDNIESKLSKL---DKYISPDTDVKVTV--SAKKGR----HKIE 59

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP--NRLKFS 189
           VT+  K   V+RAEE  E  Y +IDLV   ++ +L+K K+K     +  K    +  + +
Sbjct: 60  VTIAPKNGHVIRAEESQENLYPAIDLVVDKLKIQLKKYKDKMQKRHQENKSIRFDSPEIN 119

Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
           + IL    ED EDE+ I             + R K  ++ P++  EA+ Q+E+V HDFY 
Sbjct: 120 DSILEEDLEDFEDELFI-------------IKRRKRINIKPMSEEEAVLQMELVGHDFYI 166

Query: 8   FR 3
           FR
Sbjct: 167 FR 168

[105][TOP]
>UniRef100_B4U4G1 Ribosomal subunit interface protein n=1 Tax=Streptococcus equi
           subsp. zooepidemicus MGCS10565 RepID=B4U4G1_STREM
          Length = 182

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 58/179 (32%), Positives = 101/179 (56%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +VE K+ + I+K+  + +E+D R++ +   E     +T + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVVEQEIDARVNLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R      ++  S+V
Sbjct: 56  VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR-----EKMSTSQV 109

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                SE E ++ E TP+         +VVRTK   + P+ V EA  Q+E++ HDF+ +
Sbjct: 110 ---FTSEFEAEQAEETPE--------IKVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157

[106][TOP]
>UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH
          Length = 178

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 55/180 (30%), Positives = 94/180 (52%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           ++ II G+N+++++ +K  + +K+G+ ++K+     E+ V LS     +        + E
Sbjct: 1   MRYIISGKNIDVTEGLKSAIYEKIGK-LEKYFNPEAEIHVTLSVEKDRQ--------KIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K + +VRAE+ +   Y SIDLV  +I+R+L+K K K  D  +     N   F +V
Sbjct: 52  VTIPMKGN-IVRAEQVSNDMYASIDLVEEVIERQLKKYKSKLKDMNQSAANFNPSFFEDV 110

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
              L  + +E++I IT              R K F M P+   EA  Q+E++ H+FY FR
Sbjct: 111 ---LNEDSDEEDINIT--------------RVKRFAMKPMDAEEACVQMELLGHNFYVFR 153

[107][TOP]
>UniRef100_A7NNI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Roseiflexus castenholzii DSM 13941
           RepID=A7NNI5_ROSCS
          Length = 198

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 56/180 (31%), Positives = 89/180 (49%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           + LI+  RN +LSD  +QH+E K+ R+ +   YL R   V +          G    R +
Sbjct: 6   MNLIVNSRNGKLSDRQRQHIEQKLSRLDR---YLDRIDKVTVEHMEEMRRNEG-NVHRVQ 61

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+      +VRAE  A   Y +ID V   +QR++ + K+K    GR      R +  ++
Sbjct: 62  VTVVGDHGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDKHWRRGRL-----RRQGGQI 116

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
           +  LP  +        P   DEEE    +VRTK F + P+   EA++Q+E++ H F+ F+
Sbjct: 117 VEALPEMNAA-----APAPIDEEEQRPRIVRTKEFQVKPMYSDEAVEQMELLGHSFFIFQ 171

[108][TOP]
>UniRef100_C0MH43 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Steptococcus equi subsp. zooepidemicus H70
           RepID=C0MH43_STRS7
          Length = 182

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 58/179 (32%), Positives = 101/179 (56%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +VE K+ + I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R      ++  S+V
Sbjct: 56  VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR-----EKVSTSQV 109

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                SE E +++E TP+         +VVRTK   + P+ V EA  Q+E++ HDF+ +
Sbjct: 110 ---FTSEFEAEQVEETPE--------IKVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157

[109][TOP]
>UniRef100_A8S366 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
           BAA-613 RepID=A8S366_9CLOT
          Length = 187

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 63/191 (32%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
 Frame = -1

Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGG 399
           +S+S +  L  ++  I GRN+E++  +K  VE K+G++  +H +    EV V LS +   
Sbjct: 1   MSLSQEKELMFMRYTITGRNIEVTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDR 58

Query: 398 EFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 219
           +        + EVT+  K +  +RAEE +   Y SIDLV  II+R++R+ ++K  D    
Sbjct: 59  Q--------KIEVTIPVKGN-TIRAEESSTDMYVSIDLVEEIIERQIRRYRKKLID---- 105

Query: 218 MKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQ 39
            K    + FS+  +     +EEDE++     DDE     ++V+TK F + P    EA  Q
Sbjct: 106 -KKQAAISFSQAFI-----EEEDEVQ-----DDE----IQIVKTKKFAIKPTIPEEACLQ 150

Query: 38  LEMVDHDFYAF 6
           +EM+ H+FY F
Sbjct: 151 MEMLGHNFYVF 161

[110][TOP]
>UniRef100_C7QZG8 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Jonesia
           denitrificans DSM 20603 RepID=C7QZG8_JONDD
          Length = 219

 Score = 78.6 bits (192), Expect = 4e-13
 Identities = 51/190 (26%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +++++ GR+ E++D  ++H E+K+ ++ Q ++   R VDV ++        +  R+ R E
Sbjct: 1   MEIVVVGRHTEVADRFREHAEEKLSKIAQ-YAPTARRVDVEVTHEYNPR--QSARSERVE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH----MKGPNRLK 195
           +T+  K   V+RAE  ++  +G++DL    +Q +LR+  E++    R     ++ P  L 
Sbjct: 58  LTVRDKGP-VIRAEAASDDRFGALDLALDKLQERLRRAHERKYTSKRRIPRKLEVPKDLD 116

Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEE-------VVRTKYFDMPPLTVFEAIDQL 36
             E+I       +E+     P      E +E        ++R K  +  P+TV +AID++
Sbjct: 117 AIEMIPDPEPPTQEEATPSVPHPTQPGETVEVQLGDSPVIIRQKLHNASPMTVDDAIDEM 176

Query: 35  EMVDHDFYAF 6
           E+V HDF+ F
Sbjct: 177 ELVGHDFFLF 186

[111][TOP]
>UniRef100_B9CNR8 Light-repressed protein n=1 Tax=Atopobium rimae ATCC 49626
           RepID=B9CNR8_9ACTN
          Length = 195

 Score = 78.6 bits (192), Expect = 4e-13
 Identities = 55/179 (30%), Positives = 89/179 (49%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           V + I GR + +SDA++ HVE+K+G  ++         DV L              +  E
Sbjct: 2   VDIKISGRKVTVSDALRSHVEEKIGDALKVFDIQPMTCDVVLRVDKNPS---NLERKSVE 58

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT++  R+ VVR     +  YG+ID  +  + R+LRK K +  D   H +       S+ 
Sbjct: 59  VTVFV-RNSVVRVVSSGDDMYGAIDEAAEKVTRQLRKYKTRIVDKHHHAQNTRGRALSQ- 116

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                 E+  + IE TP +D +++L+ E    KY D+ P+T  EA+ Q +++ HDFY F
Sbjct: 117 ------EELANLIE-TPAEDLDDQLVRE----KYIDLLPMTEEEALVQTDLLGHDFYVF 164

[112][TOP]
>UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
           13814 RepID=A6BHR0_9FIRM
          Length = 178

 Score = 78.6 bits (192), Expect = 4e-13
 Identities = 60/179 (33%), Positives = 97/179 (54%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K II G+N++++  +++ VE K+G+ + ++     E+ V LS + G +        + E
Sbjct: 1   MKFIIIGKNIDVTPGLREAVESKLGK-LGRYFTPNTEIHVTLSVQKGHQ--------KIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K  G+VR+E+ +   Y SIDLV  +I+R+LRK K K     R  +G N   F + 
Sbjct: 52  VTIPVKG-GLVRSEQESSDMYVSIDLVEEVIERQLRKYKNKLV--AREQEGGN---FKQE 105

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                  D ED IE      D+ E+  ++VRTK F   P+   +A  Q+E++ HDFY F
Sbjct: 106 FF-----DAEDNIE------DDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFYVF 151

[113][TOP]
>UniRef100_Q4L4H7 Uncharacterized protein SH2139 n=1 Tax=Staphylococcus haemolyticus
           JCSC1435 RepID=Y2139_STAHJ
          Length = 192

 Score = 78.6 bits (192), Expect = 4e-13
 Identities = 54/180 (30%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
           ++  I G N+ ++DA++ ++EDK+G++ +  + +   V  V++ T           T + 
Sbjct: 2   IRFEIHGDNLTITDAIRNYIEDKIGKLERYFNDVPNAVAHVKVKTYQNS-------TTKI 54

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           EVT+  K +  +RAEE  +  Y  IDLV+S ++R++RK K +   + +H        F  
Sbjct: 55  EVTIPLK-NVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRV--NRKHKTHGEPEAFVA 111

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            +   P E+ +D +   P  D E E+I    R+K F + P+   EA+ Q+E++ HDFY F
Sbjct: 112 EVQEAPPENVDD-VNAEPTNDSEIEII----RSKQFSLKPMDSEEAVLQMELLGHDFYIF 166

[114][TOP]
>UniRef100_C5EVT1 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
           1_7_47FAA RepID=C5EVT1_9FIRM
          Length = 187

 Score = 78.2 bits (191), Expect = 5e-13
 Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
 Frame = -1

Query: 575 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGG 399
           +S+S +  L  ++  I GRN+E++  +K  VE K+G++  +H +    EV V LS +   
Sbjct: 1   MSLSQEKELMIMRYTITGRNIEVTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDR 58

Query: 398 EFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 219
           +        + EVT+  K +  +RAEE +   Y SIDLV  +I+R++R+ ++K  D    
Sbjct: 59  Q--------KIEVTIPVKGN-TIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID---- 105

Query: 218 MKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQ 39
            K    + FS+  +     +EEDE++     DDE     ++V+TK F + P    EA  Q
Sbjct: 106 -KKQAAISFSQAFI-----EEEDEVQ-----DDE----IQIVKTKKFAIKPTIPEEACLQ 150

Query: 38  LEMVDHDFYAF 6
           +EM+ H FY F
Sbjct: 151 MEMLGHSFYVF 161

[115][TOP]
>UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
           35704 RepID=B0NJJ3_EUBSP
          Length = 179

 Score = 78.2 bits (191), Expect = 5e-13
 Identities = 53/179 (29%), Positives = 97/179 (54%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K II G+N++++  +K+ VE+K+G+ ++++     E+ V LS +           ++ E
Sbjct: 1   MKFIIIGKNIDVTPGLKEAVENKLGK-LERYFTPDTEIHVTLSVQR--------ERQKIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K  G++R+E+ +   Y SIDLV  +I+R+LRK K K     RH +G    K    
Sbjct: 52  VTIPVKG-GIIRSEQESSDMYVSIDLVEEVIERQLRKYKNKLI--ARHQEGSGNFK---- 104

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                    ++  +   + +D+ E+  ++VRTK F   P+   +A  Q+E++ HDF+ F
Sbjct: 105 ---------QEFFDSGERSEDDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFFVF 152

[116][TOP]
>UniRef100_A8U6N5 Ribosomal subunit interface protein n=1 Tax=Carnobacterium sp. AT7
           RepID=A8U6N5_9LACT
          Length = 180

 Score = 78.2 bits (191), Expect = 5e-13
 Identities = 57/180 (31%), Positives = 99/180 (55%), Gaps = 2/180 (1%)
 Frame = -1

Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360
           K  ++G N+E++ A++ +VE KVG+V +K+   V E    ++ +   +     +T + EV
Sbjct: 3   KYNVRGENIEVTAAIRSYVEKKVGKV-EKYFNDVPEATAHVNLKTYSD-----KTAKVEV 56

Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180
           T+    + V+RAEE +   YGS+DLVS  ++R++RK K K            R + S V+
Sbjct: 57  TIPLP-YLVLRAEETSPDLYGSVDLVSDKLERQMRKYKTKIN---------RRTRGSNVV 106

Query: 179 LP--LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           +P  LP E++E           E+E+   +VRTK   + P+   EA+ Q++M+ H+F+ F
Sbjct: 107 VPPVLPGEEQESH---------EDEV--NIVRTKRLSLKPMDSEEAVLQMDMLGHNFFIF 155

[117][TOP]
>UniRef100_B9ND14 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ND14_POPTR
          Length = 102

 Score = 78.2 bits (191), Expect = 5e-13
 Identities = 46/98 (46%), Positives = 57/98 (58%), Gaps = 14/98 (14%)
 Frame = -1

Query: 254 KIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDE--EELI-------- 105
           KIK+KE+DHGRHMKG N+ K  E   P+    E D   ++ +KDD+  +EL         
Sbjct: 2   KIKDKESDHGRHMKGFNKFKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHLVTIH 58

Query: 104 ----EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
                  V TKYFDMPP+TV EAI +L  VDH FY FR
Sbjct: 59  SIISSNAVHTKYFDMPPVTVDEAIVRLGNVDHAFYGFR 96

[118][TOP]
>UniRef100_B8BRE6 Light-repressed protein a n=1 Tax=Thalassiosira pseudonana CCMP1335
           RepID=B8BRE6_THAPS
          Length = 198

 Score = 78.2 bits (191), Expect = 5e-13
 Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
 Frame = -1

Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT 357
           +++ G N++L+ A+  +V  K+ + + K    V   DV L+        + P+ +     
Sbjct: 7   IVVTGDNIDLTPALSDYVNSKIEKTVGKLPLAVSHCDVYLTVN------KNPKVKDAHTA 60

Query: 356 --LYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFS 189
             + T +    R  E +   Y SIDLV++ + RKLRK KE+  D  HG    G N    +
Sbjct: 61  EVVTTLKGTTFRVAESSPDMYASIDLVAARLARKLRKYKERRLDGYHGGPNMGEN---IA 117

Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
           EV+  +  ++ ED  E     D ++ ++ +V  T      P+++ EAI  L+ +DHDFY 
Sbjct: 118 EVLNAIEVDESEDGAEEESYIDPDQAVVTKVKST------PISIKEAIFALDYIDHDFYV 171

Query: 8   FR 3
           FR
Sbjct: 172 FR 173

[119][TOP]
>UniRef100_Q5KV92 Ribosomal protein S30EA n=1 Tax=Geobacillus kaustophilus
           RepID=Q5KV92_GEOKA
          Length = 183

 Score = 77.4 bits (189), Expect = 8e-13
 Identities = 55/175 (31%), Positives = 103/175 (58%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           ++G N+E++ A++++VE K+G+ ++++     +V V ++ +   + G+G    + EVT+ 
Sbjct: 5   VRGENLEVTPALREYVEKKIGK-LERYFDGTEDVHVHVNLKVYND-GQG----KIEVTI- 57

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
              H ++RAEE  E  Y +IDLV+  ++R++RK K K      + K  +R K +++  P+
Sbjct: 58  PMPHLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKEAKLAAPV 112

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           PS     E       ++EEE   E+VRTK+F + P+   EAI Q+ ++ H+F+ F
Sbjct: 113 PSGASAAE-------NNEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 158

[120][TOP]
>UniRef100_C0M6F8 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Streptococcus equi subsp. equi 4047
           RepID=C0M6F8_STRE4
          Length = 182

 Score = 77.4 bits (189), Expect = 8e-13
 Identities = 58/179 (32%), Positives = 100/179 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +VE K+ + I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R      ++  S+V
Sbjct: 56  VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHR-----EKMSTSQV 109

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                SE E ++ E TP+         +VVRTK   + P+ V EA  Q+E++ HDF+ +
Sbjct: 110 ---FTSEFEAEKAEETPE--------IKVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157

[121][TOP]
>UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
           ATCC 43255 RepID=UPI00017F5ACC
          Length = 185

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 53/180 (29%), Positives = 96/180 (53%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +++I+ GR M+L+D +K +V+ K+ R+     YL  E +V+++     +       ++ E
Sbjct: 1   MQIIVSGRQMKLTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+      ++RAE+  +  Y +ID+V   + R++ K K K  D  ++ K    ++F   
Sbjct: 52  VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFEN- 107

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
              L   D   E +    ++DE  +IE   R K F++ P++  EAI Q+E+V H+FY FR
Sbjct: 108 ---LDFIDNSSEFDDYDDEEDENIVIE---RRKKFNVKPMSSEEAILQMELVGHNFYMFR 161

[122][TOP]
>UniRef100_Q5M196 Ribosomal subunit interface protein, ribosomal protein S30AE family
           n=2 Tax=Streptococcus thermophilus RepID=Q5M196_STRT1
          Length = 182

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 60/179 (33%), Positives = 99/179 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +VE K+ +V +K+ +  +E+  R++ +   E     +T + E
Sbjct: 2   IKCSIRGENIEVTEALRDYVESKLSKV-EKYFHEDQELHARVNLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+ T     +RAE+ +   YGSIDLV   I R++RK K K     R  K P    FS  
Sbjct: 56  VTIPTGSV-TLRAEDVSLDMYGSIDLVVDKIARQIRKNKTKIARKYRE-KVPTGEMFS-- 111

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                +E  ++E+E  P          EVVRTK  ++ P+ V EAI Q+E++ HDF+ +
Sbjct: 112 -----TEFNKEEVEEAPAV--------EVVRTKNIELKPMDVEEAILQMELLGHDFFIY 157

[123][TOP]
>UniRef100_A9W9Y4 Ribosomal subunit interface protein n=2 Tax=Chloroflexus
           RepID=A9W9Y4_CHLAA
          Length = 197

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 52/184 (28%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS---TRGGGEFGRGPRTR 372
           ++L I+ RN ++SD  + H+E+K+ + ++++ + +  + V +     R  GE        
Sbjct: 1   MELTIKSRNGKISDRQRAHIEEKLSK-LERYLHGITSITVEVQHEQQRNAGE------VY 53

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM-KGPNRLK 195
           R + TL  +   ++RAEE A   Y +ID V  ++QR++ + K+K     R   + PN L 
Sbjct: 54  RVQTTLVAEHGVILRAEERAPDLYAAIDEVQEVLQRQIARYKDKYWRRSREQRRAPNGLT 113

Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
            +E +      + E     TP +   E     V+RTK F + P+ V +AI+Q+E++ H+F
Sbjct: 114 PAEEV---AIAEAEAAALATPTEVGSE---ARVIRTKTFRLRPMFVDDAIEQMELLGHNF 167

Query: 14  YAFR 3
           + F+
Sbjct: 168 FVFQ 171

[124][TOP]
>UniRef100_A3CPW1 30S ribosomal interface protein S30EA, putative n=1
           Tax=Streptococcus sanguinis SK36 RepID=A3CPW1_STRSV
          Length = 180

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 57/179 (31%), Positives = 101/179 (56%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++DA++ +V  K+ + I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   LKYSIRGENLEVTDALRDYVVSKLEK-IEKYFQAEQELDARVNLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV+  I+R++RK K K       ++  NR K +  
Sbjct: 56  VTIPLGSI-TLRAEDISQDMYGSIDLVTDKIERQIRKNKTK-------IERKNRNKVATS 107

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            L   S  EE            EE+  +VVR+K+ D+ P+ + EAI Q++++ HDF+ +
Sbjct: 108 QLFTDSFAEE-----------AEEVPSKVVRSKHIDLKPMDLEEAILQMDLLGHDFFIY 155

[125][TOP]
>UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile
           RepID=C9XLM7_CLODI
          Length = 187

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 52/180 (28%), Positives = 98/180 (54%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +++I+ GR M+L+D +K +V+ K+ R+     YL  E +V+++     +       ++ E
Sbjct: 1   MQIIVSGRQMKLTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+      ++RAE+  +  Y +ID+V   + R++ K K K  D  ++ K    ++F  +
Sbjct: 52  VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENL 108

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
              + +  E D+ +     DDEE+    + R K F++ P++  EAI Q+E+V H+FY FR
Sbjct: 109 DF-IDNSSEFDDYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 163

[126][TOP]
>UniRef100_C7ML59 Ribosomal subunit interface protein n=1 Tax=Cryptobacterium curtum
           DSM 15641 RepID=C7ML59_CRYCD
          Length = 188

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 3/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRG-PRTR 372
           +++ + GR M ++DA+K + E+K+G  ++      L+ EV + +      E  R   R  
Sbjct: 1   MEISVTGRKMPVTDALKSYAEEKIGNSMKVMDIDPLIAEVILHV------EQNRAIARPA 54

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
            CEVT+  K H ++R EEH E  Y +ID+ ++ + R+LRK K +  +        +    
Sbjct: 55  ICEVTMTAKGH-IIRVEEHEEDMYAAIDVAAAKVLRQLRKFKTRVVERNTRTDAASIRSA 113

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
               L L +  EE         DDE      VVR K  D+ PLT  EA+ +++++ HDF+
Sbjct: 114 KSAKLDLDALMEE-------LSDDE------VVREKSIDLQPLTEEEALVEIDLLGHDFF 160

Query: 11  AF 6
           A+
Sbjct: 161 AY 162

[127][TOP]
>UniRef100_C5R7Z6 Ribosome-associated inhibitor protein Y n=1 Tax=Weissella
           paramesenteroides ATCC 33313 RepID=C5R7Z6_WEIPA
          Length = 238

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 57/199 (28%), Positives = 107/199 (53%), Gaps = 4/199 (2%)
 Frame = -1

Query: 587 GAASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQ----KHSYLVREVDVR 420
           G  S   S  G    ++  ++G N+E++DA+ +++E ++ R+ +    + SY+ R V+VR
Sbjct: 35  GILSYKFSQTGDRIMLEFKVRGENIEITDAMSEYIEKRISRLERYLNTEASYIAR-VNVR 93

Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240
               G         T + EVT+    + ++RAE+     Y ++D VS  ++R++RK K K
Sbjct: 94  SYKEG---------TFKTEVTIQLP-YLLLRAEDTQTDMYQTVDFVSDKLERQIRKYKTK 143

Query: 239 ETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLT 60
                R  KG   L+ ++ +   P+   E+     P+ +D+     E+VRTK+ D+ P+ 
Sbjct: 144 VNRKSRE-KGYKGLENTDFMAVDPAAAVEE-----PEPEDDGL---EIVRTKHVDLKPMD 194

Query: 59  VFEAIDQLEMVDHDFYAFR 3
           V EA+ Q+E++ H+F+ F+
Sbjct: 195 VEEAVLQMELLGHEFFIFQ 213

[128][TOP]
>UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
           49176 RepID=C4G2X0_ABIDE
          Length = 175

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 52/180 (28%), Positives = 92/180 (51%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K II GR   ++D ++  +E+K+G++     Y   + +V ++ +   +       ++ E
Sbjct: 1   MKYIINGRGTNVTDGLRNAIEEKLGKL---EHYFTPDTEVHVTLKVEKD------RQKVE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K H ++RAE+ ++  Y SIDL+  II+R+LR+ K K  D  +         F+  
Sbjct: 52  VTVPVKGH-IIRAEQVSDDMYVSIDLIEDIIERQLRRYKTKIVDSKQSASN-----FTSA 105

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
            +               Q DD E+   +V+RTK F + P+   EA  Q+E+++H FY FR
Sbjct: 106 FM---------------QDDDYEDEDVKVIRTKRFAVKPMDPEEACVQMELLNHSFYVFR 150

[129][TOP]
>UniRef100_C2LVK8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus hominis
           SK119 RepID=C2LVK8_STAHO
          Length = 191

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 50/183 (27%), Positives = 97/183 (53%), Gaps = 4/183 (2%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
           ++  I G N+ ++DA++ ++E+K+G++ +  + +   V  V++ T             + 
Sbjct: 2   IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYQNS-------ATKI 54

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           EVT+  K +  +RAEE  +  Y  IDLV+S ++R++RK K +     R    P       
Sbjct: 55  EVTIPLK-NVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKNRDNGEPE------ 107

Query: 185 VILPLPSEDE---EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
              P  +E +    +++E T +  +E E+  E++R+K F + P+   EA+ Q++++ HDF
Sbjct: 108 ---PFIAEQQTVVNEDVEATSESSNENEI--EIIRSKQFSLKPMDSEEAVLQMDLLGHDF 162

Query: 14  YAF 6
           Y F
Sbjct: 163 YIF 165

[130][TOP]
>UniRef100_C0U8U2 SSU ribosomal protein S30P n=1 Tax=Geodermatophilus obscurus DSM
           43160 RepID=C0U8U2_9ACTO
          Length = 228

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 4/183 (2%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRC 366
           ++++++GRN+E+ +  +QHVEDKVG+  +    L +  +DV L         +  + +R 
Sbjct: 1   MEIVVRGRNVEVPEHYRQHVEDKVGQSDRFDGKLKILRIDVELFHEKNPR--QSGKCQRV 58

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMKGPNRLKFS 189
           E+TL  K   VVRAE  A   Y ++DL +  +  +LRK  ++    HGR      R+   
Sbjct: 59  EITLRGKGP-VVRAEAAAPDFYAALDLAAGKLDHRLRKAADRRRVHHGRRTPASVRVGGG 117

Query: 188 EVILPLP-SEDEEDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
                +  S D + E+   P   D +E L  ++VR K+    P+ V +A+ ++E+V HDF
Sbjct: 118 APDTDVTESFDRDRELAEGPHVTDLDEHLPGQIVREKHHPATPMHVDQALHEMELVGHDF 177

Query: 14  YAF 6
           + F
Sbjct: 178 FLF 180

[131][TOP]
>UniRef100_B0G387 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC
           27755 RepID=B0G387_9FIRM
          Length = 177

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 54/179 (30%), Positives = 97/179 (54%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K II G+N++++  +K  VE K+G+ +Q++     E+ V LS +           ++ E
Sbjct: 1   MKFIIIGKNIDVTPGLKDAVESKLGK-LQRYFTPDTEIHVTLSVQ--------KEHQKIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K + ++R+E+ ++  Y SIDLV  +I+R+LRK K K     ++ +G N   FS+ 
Sbjct: 52  VTIPVKGN-IIRSEQESDDMYVSIDLVEEVIERQLRKYKNKLV--AKNQEGNN---FSKT 105

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           +       E+DE++I              VRTK F + P+   +A  Q+E++ H+F+ F
Sbjct: 106 LFETEESIEDDEVKI--------------VRTKRFGIKPMYPEDACVQMELLGHNFFVF 150

[132][TOP]
>UniRef100_C2LQ50 Ribosomal subunit interface protein, ribosomal protein S30AE family
           n=1 Tax=Streptococcus salivarius SK126
           RepID=C2LQ50_STRSL
          Length = 182

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 58/179 (32%), Positives = 100/179 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +VE K+ +V +K+    +E++ R++ +   E     +T + E
Sbjct: 2   IKYSIRGENIEVTEALRDYVESKLSKV-EKYFNEDQELNARVNLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+ T     +RAE+ ++  YGSIDLV   I+R++RK K K     R  K P    FS  
Sbjct: 56  VTIPTGSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIARKHRE-KVPTGEVFS-- 111

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                ++   +++E  P          EVVRTK  ++ P+ V EAI Q+E++ HDF+ +
Sbjct: 112 -----ADFNNEQVEEAPAV--------EVVRTKNIELKPMDVEEAILQMELLGHDFFIY 157

[133][TOP]
>UniRef100_UPI0001BB5516 ribosomal subunit interface protein n=1 Tax=Streptococcus sp.
           2_1_36FAA RepID=UPI0001BB5516
          Length = 180

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 53/179 (29%), Positives = 102/179 (56%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +V  K+ + I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQADQELDARVNLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R     +++ F++V
Sbjct: 56  VTIPLGSI-TLRAEDISQDMYGSIDLVVDKIERQIRKNKTKIERKNRTKVSTSQI-FTDV 113

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           ++        +E++  P K         VVR+K+ D+ P+ + EA+ Q+E++ HDF+ +
Sbjct: 114 VV--------EEVDEAPAK---------VVRSKHIDLKPMDLEEALLQMELLGHDFFIY 155

[134][TOP]
>UniRef100_B8GDB0 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Chloroflexus aggregans DSM 9485 RepID=B8GDB0_CHLAD
          Length = 197

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKV---GRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 372
           ++  I+ RN ++S+  ++H+E+K+   GR +   + +  EV        G  +       
Sbjct: 1   MEFTIKSRNGKISERQREHIEEKLAKLGRYLNGITSITVEVQHEQQRNVGEVY------- 53

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM-KGPNRLK 195
           R + TL  +   ++RAEE A   Y +ID V  ++QR++++ K+K     R + +  N L 
Sbjct: 54  RVQTTLVAEHGVILRAEERAADLYAAIDAVQEVLQRQIQRYKDKYWRRSRELRRATNGLT 113

Query: 194 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
            +E +    +E E     +      E E + +V+RTK F + P+ V +AI+Q+E++ H F
Sbjct: 114 PAEEVAIAEAETEAMTAPV------ETEPVAKVIRTKTFRLRPMFVDDAIEQMELLGHTF 167

Query: 14  YAFR 3
           + F+
Sbjct: 168 FVFQ 171

[135][TOP]
>UniRef100_C0BYR7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
           15053 RepID=C0BYR7_9CLOT
          Length = 178

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 55/179 (30%), Positives = 94/179 (52%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K II G+N++++  +++ VE K+G+ ++K+     E+ V LS             ++ E
Sbjct: 1   MKFIISGKNIDVTPGLRETVEHKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K + ++R+E+ +   Y SIDLV  +I+R+LRK K K     RH +G N       
Sbjct: 52  VTIPVKGN-IIRSEQVSSDMYVSIDLVEEVIERQLRKYKNKLV--ARHQEGGN------- 101

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                   E  E E   + DDE     ++VRTK F + P+   +A  Q++++ HDF+ F
Sbjct: 102 -----FRQEFFESEYATEDDDE----VKIVRTKRFGIKPMYPEDACIQMDLLGHDFFVF 151

[136][TOP]
>UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
           ATCC 43243 RepID=B7AN97_9BACE
          Length = 179

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 53/179 (29%), Positives = 93/179 (51%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           ++ +I GRN+E++D +K+ VE+K+G+ + +      EV V LS             ++ E
Sbjct: 4   MRFVIVGRNIEVTDGLKEAVEEKLGK-LDRFFAPDTEVKVTLSVE--------KERQKIE 54

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K   ++R+E+ +   Y SIDLV  +I+R+L+K K K  D     K  +   F++ 
Sbjct: 55  VTIPVKG-SIIRSEQVSNDMYVSIDLVEEVIERQLKKYKNKLID-----KQQDAAAFAQE 108

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            +     D++ +++I              +RTK FD+ P+   EA  Q+E++ H FY F
Sbjct: 109 YIDKEYVDDDADVKI--------------IRTKRFDVKPMDPEEACVQMELLGHSFYVF 153

[137][TOP]
>UniRef100_C5WIE9 Ribosome-associated factor Y n=1 Tax=Streptococcus dysgalactiae
           subsp. equisimilis GGS_124 RepID=C5WIE9_STRDG
          Length = 182

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 56/179 (31%), Positives = 100/179 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +VE K+ + I+K+    +E+D R++ +   E     ++ + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KSSKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R  K P    F+  
Sbjct: 56  VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-- 111

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                +E E ++++ TP+         +VVRTK   + P+ V EA  Q+E++ HDF+ +
Sbjct: 112 -----TEFEAEQVDETPE--------VKVVRTKNLTLKPMDVEEARLQMELLGHDFFIY 157

[138][TOP]
>UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale
           ATCC 33656 RepID=C4ZI34_EUBR3
          Length = 175

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 57/180 (31%), Positives = 96/180 (53%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +++ I G+N+EL++ +KQ VE+K+ + ++K      +V V LS     +        + E
Sbjct: 1   MRITISGKNIELTEGLKQAVEEKLSK-LEKFFKPDTDVYVTLSVEKDRQ--------KIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K H V+R+E+ +   Y SIDLV  +I+R+LRK + K +            K++  
Sbjct: 52  VTIPAKGH-VIRSEQVSNDMYVSIDLVEEVIERQLRKYRTKISAK----------KYAPA 100

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
           I       ++D +E     DD E+   ++VRTK F M P+   +A  Q+E+  HDF+ FR
Sbjct: 101 IF------QDDFVEA----DDAEDEEIKIVRTKRFGMKPMYPEDACIQMELSGHDFFVFR 150

[139][TOP]
>UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
           27758 RepID=C0BAM2_9FIRM
          Length = 189

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 59/182 (32%), Positives = 93/182 (51%)
 Frame = -1

Query: 551 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 372
           LS +  II GRN++++  ++Q VE K+G++     Y   E D+ ++     E       +
Sbjct: 9   LSCMNFIISGRNIDITPGLRQAVEQKLGKL---EKYFTPETDIIVTLSVEKE------RQ 59

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
           + EVT+  K + ++R+E+ +   Y SIDLV  II+R+LRK K K        +G +  + 
Sbjct: 60  KIEVTIPVKGN-IIRSEQESSDMYVSIDLVEEIIERQLRKYKTKLI---AKQQGGHDFR- 114

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
            E I    S  E DEIEI              VRTK F + P+   +A  Q+E++ H+FY
Sbjct: 115 QEFIESDTSAAESDEIEI--------------VRTKRFGIKPMFPEDACIQMELLGHNFY 160

Query: 11  AF 6
            F
Sbjct: 161 VF 162

[140][TOP]
>UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
           27756 RepID=A5KKP2_9FIRM
          Length = 198

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
 Frame = -1

Query: 551 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 372
           L+S+  II G+N+E++  +K+ +E K+G+ ++++     E+ V LS   G +        
Sbjct: 11  LNSMNFIISGKNIEVTPGLKEAIEQKLGK-LERYFTPETEIIVTLSVEKGRQ-------- 61

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
           + EVT+  K   ++R+E+ +   Y SIDLV  +I+R+LRK K K     +          
Sbjct: 62  KIEVTIPVKG-SIIRSEQTSSDMYVSIDLVEEVIERQLRKYKNKLVAKSQ---------- 110

Query: 191 SEVILPLPSEDEEDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
                 +PS   + E IE   +  D++E+   +VRTK F + P+   +A  Q+E++ H F
Sbjct: 111 GHPTAAVPSGSIKKEFIESDDESSDDDEI--RIVRTKKFGIKPMFPEDACIQMELLGHSF 168

Query: 14  YAF 6
           + F
Sbjct: 169 FVF 171

[141][TOP]
>UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
           QCD-23m63 RepID=UPI00017F60C6
          Length = 185

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 53/180 (29%), Positives = 95/180 (52%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +++I+ GR M+L+D +K +V+ K+ R+     YL  E +V+++     +       ++ E
Sbjct: 1   MQIIVSGRQMKLTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+      ++RAE+  +  Y +ID+V   + R++ K K K  D  ++ K    ++F  V
Sbjct: 52  VTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENV 108

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
                S + +D        DDEE     + R K F++ P++  EAI Q+E+V H+FY FR
Sbjct: 109 DFIDNSSEFDDY-------DDEEYENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFR 161

[142][TOP]
>UniRef100_UPI00004C2450 COG1544: Ribosome-associated protein Y (PSrp-1) n=1
           Tax=Streptococcus pyogenes M49 591 RepID=UPI00004C2450
          Length = 182

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 57/179 (31%), Positives = 99/179 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +VE K+ + I+K+    +E+D R++ +   E     R+ + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R  K P    F+  
Sbjct: 56  VTIPLDSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-- 111

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                +E E +E++  P+         +VVRTK   + P+ V EA  Q+E++ HDF+ +
Sbjct: 112 -----TEFEAEEVDEIPE--------VQVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157

[143][TOP]
>UniRef100_B9MLV8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Anaerocellum thermophilum DSM 6725
           RepID=B9MLV8_ANATD
          Length = 181

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 2/181 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +  II G+N+E++DA+K+ +E K+ + ++++  L  +V V LS                E
Sbjct: 1   MNFIISGKNIEVTDALKERIEKKLSK-LERYIKLNTDVHVTLSVEKISHI--------VE 51

Query: 362 VTLYTKRHGVV-RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+    HG++ RAEE +   Y +IDLV   ++R++RK K K            R K +E
Sbjct: 52  VTI--PFHGMILRAEERSNDMYSAIDLVVDTLERQIRKFKTKIA---------KRAKDAE 100

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
            +  +  E EE      P+K+ +EE  E  + +TK F + P++V EAI Q+ ++ H+F+ 
Sbjct: 101 SLRYMTFELEE------PEKEVQEENSEFRIAKTKRFPIKPMSVEEAILQMNLLGHNFFV 154

Query: 8   F 6
           F
Sbjct: 155 F 155

[144][TOP]
>UniRef100_B9DV32 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Streptococcus uberis 0140J RepID=B9DV32_STRU0
          Length = 182

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 59/179 (32%), Positives = 97/179 (54%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +VE K+ + I+K+     E+D R++ +   E     +T + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVEAKLAK-IEKYFVEDSEIDTRVNLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+      ++RAE+ ++  YGSIDLV   I+R++RK K K     R  K P    F   
Sbjct: 56  VTIILGSM-ILRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFR-- 111

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                SE E +E+        EE    +VVRTK   + P+ V EA  Q+E++ HDF+ +
Sbjct: 112 -----SEFETEEV--------EEGSEVKVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157

[145][TOP]
>UniRef100_A7GUW3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GUW3_BACCN
          Length = 179

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 62/180 (34%), Positives = 99/180 (55%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + I+++     EV V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-IERYFDTFPEVKVNLKVYSDKQ--------RVE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 52  VTIPFTDL--LLRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSAKTAFI- 107

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
               LP +  ++E++       E+EL  E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 108 ----LPDQLGQEEVQ-------EDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 154

[146][TOP]
>UniRef100_C2QJQ3 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Bacillus cereus R309803 RepID=C2QJQ3_BACCE
          Length = 180

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+G+ ++++     E+ V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLGK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 52  VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            ILP          E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

[147][TOP]
>UniRef100_C0VBX3 SSU ribosomal protein S30P n=1 Tax=Xylanimonas cellulosilytica DSM
           15894 RepID=C0VBX3_9MICO
          Length = 216

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 55/183 (30%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +++++ GR+ ++ +  ++HVEDK+ +V Q  S LV+ VDV ++     +        R E
Sbjct: 1   MEIVVVGRHTDVPERFRRHVEDKLTKVTQL-SPLVQRVDVEVTHENNPKLS--DVRERVE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLK-FS 189
           +T+  K   V+RAE  A+  YG++DL    +  +LR+ +++  DH R ++  P  ++ + 
Sbjct: 58  LTVRAKGP-VIRAEAAADDRYGALDLAIDKLIERLRRSRDRRKDHRRTYVTAPVDVRPYD 116

Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEE--VVRTKYFDMPPLTVFEAIDQLEMVDHDF 15
           EV  P P E EE    +   +  E +L +   V+R K      +TV +A+ ++E+V HDF
Sbjct: 117 EVRSPEP-EPEESVPLVVDGEAVEHQLGDSPVVIRQKLHSADAMTVDDAVYEMELVGHDF 175

Query: 14  YAF 6
           + F
Sbjct: 176 FLF 178

[148][TOP]
>UniRef100_A6CQE4 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. SG-1
           RepID=A6CQE4_9BACI
          Length = 189

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 53/175 (30%), Positives = 91/175 (52%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           I+G N+E++ A++ HVE+K+G+ + ++     + DV ++ +   +     +  + EVT+ 
Sbjct: 6   IRGENIEVTPAIRDHVENKIGK-LNRYFNETPDADVHVNLKVYPD-----KKTKVEVTI- 58

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
              H V+RAEE  E  Y +IDL+   ++R++RK K K     R    P     ++  L  
Sbjct: 59  PMPHLVLRAEERHEDMYAAIDLIVDKLERQIRKHKTKVNRKMREKGSPKEFFAAQEGLTT 118

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
              +E         K  E E  +EVVRTK F++ P+   EAI Q+ ++ H F+ F
Sbjct: 119 SQLNE---------KARETEENDEVVRTKQFNLKPMDSEEAILQMNLLGHSFFIF 164

[149][TOP]
>UniRef100_Q5XAQ7 Ribosome-associated factor Y n=10 Tax=Streptococcus pyogenes
           RepID=RAFY_STRP6
          Length = 182

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 57/179 (31%), Positives = 99/179 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +VE K+ + I+K+    +E+D R++ +   E     R+ + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R  K P    F+  
Sbjct: 56  VTIPLDSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-- 111

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                +E E +E++  P+         +VVRTK   + P+ V EA  Q+E++ HDF+ +
Sbjct: 112 -----TEFEAEEVDEIPE--------VQVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157

[150][TOP]
>UniRef100_Q04E96 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Oenococcus oeni PSU-1 RepID=Q04E96_OENOB
          Length = 190

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVE---DKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360
           I+G NM  +DA+  +++   +K+   I + +  +  ++VR             +T + EV
Sbjct: 6   IRGENMSTTDAINNYIKLRLEKLNNYIDQKNNPIAHINVRKYNE---------KTFKIEV 56

Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180
           T+    +  +RAEE     Y ++DLVS+ + R++RK K +     R  +G   + F+E I
Sbjct: 57  TIPLP-YLTLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGIDFNEAI 114

Query: 179 LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            P+PS+  ED+      K D       V+R K   + P+ + EA+ Q+EM+DHDF+ F
Sbjct: 115 DPVPSDTNEDK------KID-------VIRRKNLSLKPMDIEEAVLQMEMLDHDFFLF 159

[151][TOP]
>UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens
           ATCC 27750 RepID=C4Z2Z4_EUBE2
          Length = 175

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 53/179 (29%), Positives = 93/179 (51%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           ++ II GRN+++++ +K  VE+K+G+ + +      EV+V LS             ++ E
Sbjct: 1   MRFIITGRNIDITEGLKSAVEEKLGK-LDRFFAPETEVNVTLSVE--------KERQKIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K + ++R+E+ +   Y SIDLV  +I+R+L+K K K  D     K  N   F++ 
Sbjct: 52  VTIPVKGN-IIRSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVD-----KQQNAAAFAQE 105

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            +    +D+E +I                +RTK F + P+   EA  Q+E++ H+FY F
Sbjct: 106 FVEKDYDDDEVKI----------------IRTKRFGIKPMDPEEACVQMELLGHNFYVF 148

[152][TOP]
>UniRef100_C6SS06 Putative ribosome-associated protein n=2 Tax=Streptococcus mutans
           RepID=C6SS06_STRMN
          Length = 182

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 55/179 (30%), Positives = 96/179 (53%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++DA++ +VE K+ + I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKYSIRGENIEVTDAIRNYVESKLKK-IEKYFNAEQELDARINLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R  K    +     
Sbjct: 56  VTI-PLAPVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHREKKPAAHV----- 109

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                +E E +E+E  P          +VVRTK   + P+ + EA  Q++++ HDF+ +
Sbjct: 110 ---FTAEFEAEEMEEAP--------AIKVVRTKNITLKPMDIEEARLQMDLLGHDFFIY 157

[153][TOP]
>UniRef100_A0NI00 Ribosomal subunit interface protein n=1 Tax=Oenococcus oeni ATCC
           BAA-1163 RepID=A0NI00_OENOE
          Length = 190

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVE---DKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360
           I+G NM  +DA+  +++   +K+   I + +  +  ++VR             +T + EV
Sbjct: 6   IRGENMSTTDAINNYIKLRLEKLNNYIDQKNNPIAHINVRKYNE---------KTFKIEV 56

Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180
           T+    +  +RAEE     Y ++DLVS+ + R++RK K +     R  +G   + F+E I
Sbjct: 57  TIPLP-YLTLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGIDFNEAI 114

Query: 179 LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            P+PS+  ED+      K D       V+R K   + P+ + EA+ Q+EM+DHDF+ F
Sbjct: 115 DPVPSDTNEDK------KID-------VIRRKTLSLKPMDIEEAVLQMEMLDHDFFLF 159

[154][TOP]
>UniRef100_Q03M66 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
           Tax=Streptococcus thermophilus LMD-9 RepID=Q03M66_STRTD
          Length = 182

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 59/179 (32%), Positives = 98/179 (54%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +VE K+ +V +K+ +  +E+  R++ +   E     +T + E
Sbjct: 2   IKYSIRGENIEVTEALRDYVESKLSKV-EKYFHEDQELHARVNLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+ T     +RAE+ +   YGSIDLV   I R++RK K K     R  K P    FS  
Sbjct: 56  VTIPTGSV-TLRAEDVSLDMYGSIDLVVDKIARQIRKNKTKIARKYRE-KVPTGEMFS-- 111

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                +E  ++E+E  P          EVVR K  ++ P+ V EAI Q+E++ HDF+ +
Sbjct: 112 -----TEFNKEEVEEAPAV--------EVVRIKNIELKPMDVEEAILQMELLGHDFFIY 157

[155][TOP]
>UniRef100_A8AVW6 Ribosomal subunit interface protein n=1 Tax=Streptococcus gordonii
           str. Challis RepID=A8AVW6_STRGC
          Length = 180

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 52/179 (29%), Positives = 101/179 (56%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +V  K+ + I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQADQELDARVNLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R     +++ F++ 
Sbjct: 56  VTIPLGSI-TLRAEDISQDMYGSIDLVVDKIERQIRKNKTKIERKNRTKVSTSQI-FTDA 113

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           ++        +E++  P K         VVR+K+ D+ P+ + EA+ Q+E++ HDF+ +
Sbjct: 114 VV--------EEVDEAPAK---------VVRSKHIDLKPMDLEEALLQMELLGHDFFIY 155

[156][TOP]
>UniRef100_D0BMS6 Ribosomal subunit interface protein n=1 Tax=Granulicatella elegans
           ATCC 700633 RepID=D0BMS6_9LACT
          Length = 182

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 55/179 (30%), Positives = 96/179 (53%)
 Frame = -1

Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360
           K  I+G N+E+++A++ + E K+ + ++K+   V    V ++ +   E     +T + EV
Sbjct: 3   KYNIRGENIEVTEAIRNYAEKKLSK-LEKYFGDVANATVHVNLKVYTE-----KTAKVEV 56

Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180
           T+    + V+RAEE +   YGSIDLV   ++R++RK K K     R  KG     F   +
Sbjct: 57  TIPLP-YLVLRAEETSGDLYGSIDLVIDKLERQVRKYKTKINRKSRE-KG-----FDIPV 109

Query: 179 LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
            P           + P+  DE+E + E+VRTK  D+ P+   EA+ Q+ M+ H+F+ ++
Sbjct: 110 AP-----------VVPEPVDEDESVLEIVRTKRVDLKPMDSEEAVLQMNMLGHNFFIYQ 157

[157][TOP]
>UniRef100_C8NDQ1 Ribosomal subunit interface protein n=1 Tax=Granulicatella adiacens
           ATCC 49175 RepID=C8NDQ1_9LACT
          Length = 186

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 54/179 (30%), Positives = 97/179 (54%)
 Frame = -1

Query: 539 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 360
           K  I+G N+E+++A++Q+ E K+ + ++K+   V      ++ +   E     +T + EV
Sbjct: 9   KYNIRGENIEVTEAIRQYAEKKISK-LEKYFTDVANATAYVNLKVYTE-----KTAKVEV 62

Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180
           T+    + V+RAEE +   YGSIDLV   ++R++RK K K       +   +R K  +++
Sbjct: 63  TIPLP-YLVLRAEETSIDLYGSIDLVVDKLERQVRKHKTK-------INRKSREKGFDIV 114

Query: 179 LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
           LP             P+  +EEE   E+VRTK  D+ P+   EA+ Q+ M+ H+F+ ++
Sbjct: 115 LPT-----------LPEAPEEEETGLEIVRTKRIDLKPMDSEEAVLQMNMLGHNFFIYQ 162

[158][TOP]
>UniRef100_C1WM73 SSU ribosomal protein S30P; sigma 54 modulation protein n=1
           Tax=Kribbella flavida DSM 17836 RepID=C1WM73_9ACTO
          Length = 211

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 6/186 (3%)
 Frame = -1

Query: 545 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 366
           SV ++++G + E+SD  +Q+VE+K+ R I+K  + V   +V +S        +  R  R 
Sbjct: 4   SVDVVVKGHHCEVSDRFRQYVEEKLAR-IEKVDHRVLRCEVEVSQEKNPR--QHDRAMRV 60

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH-GRHM-KGPNRLKF 192
           E+T+YTK   VVRAE   ET   + D+    ++ ++RK  ++   H G H  +G   L  
Sbjct: 61  ELTMYTKGP-VVRAEACGETKQAAFDVSLDRLRAQVRKAADRRRVHRGEHAPEGLRHLNA 119

Query: 191 SEVILPL-PSEDEEDEIEITPQKDDEEELIEE---VVRTKYFDMPPLTVFEAIDQLEMVD 24
            + +  L P  ++  E E+  QK     +  +   V+R K     P+++ +A+ +LE+V 
Sbjct: 120 KQPVNGLAPEAEDSTEDEVPTQKIGSLTVTGDGPLVMREKTHTAKPMSLDQALYELELVG 179

Query: 23  HDFYAF 6
           HDFY F
Sbjct: 180 HDFYLF 185

[159][TOP]
>UniRef100_C0FTS3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans
           DSM 16841 RepID=C0FTS3_9FIRM
          Length = 176

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 55/179 (30%), Positives = 95/179 (53%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +++ I GRN+EL++ +K  VEDK+ + ++K+     EV+V LS             ++ E
Sbjct: 1   MRIKITGRNIELTEGLKAAVEDKLNK-LEKYFTPDTEVNVTLSVE--------KERQKVE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K    +R+E+ +   Y SIDLV  +I+R+L+K + K     ++     +  F   
Sbjct: 52  VTIPMKG-SYIRSEQVSSDMYVSIDLVEEVIERQLKKYRTKLVTKQQNAAAVFKQDFL-- 108

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                  DE+ E        D+EE+  +++RTK FDM P+   +A  ++E++ HDFY F
Sbjct: 109 -------DEKSE--------DDEEI--KIIRTKKFDMKPMYPEDACVEMELLGHDFYVF 150

[160][TOP]
>UniRef100_C0CVD1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
           DSM 15981 RepID=C0CVD1_9CLOT
          Length = 176

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGGEFGRGPRTRRC 366
           ++  I GRN+E++  +K  VE K+G++  +H +    EV V LS +   +        + 
Sbjct: 1   MRYTITGRNIEVTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDRQ--------KI 50

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           EVT+  K +  +RAEE +   Y SIDLV  +I+R++R+ ++K  D     K    L FS+
Sbjct: 51  EVTIPVKGN-TIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAALSFSQ 104

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
             +    +++ED+I I              V+TK F + P    EA  Q+EM+ H+FY F
Sbjct: 105 AFIDEEEDEQEDDIRI--------------VKTKKFAIKPTIPEEACLQMEMLGHNFYVF 150

[161][TOP]
>UniRef100_P28368 Uncharacterized protein yvyD n=1 Tax=Bacillus subtilis
           RepID=YVYD_BACSU
          Length = 189

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 52/175 (29%), Positives = 92/175 (52%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           I+G N+E++ A+K HVE K+G++ +   + V + DV ++ +   +     +  + EVT+ 
Sbjct: 5   IRGENIEVTPALKDHVERKIGKLERYFDHSV-DADVNVNLKFYND-----KESKVEVTI- 57

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
                 +R+E H E  Y +IDL ++ ++R++RK K K     R    P  L  + +    
Sbjct: 58  PMTDLALRSEVHNEDMYNAIDLATNKLERQIRKHKTKVNRKFREQGSPKYLLANGL---- 113

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                  + +I  Q D EEE   ++VR K F++ P+   EAI Q+ M+ H+F+ F
Sbjct: 114 -----GSDTDIAVQDDIEEEESLDIVRQKRFNLKPMDSEEAILQMNMLGHNFFVF 163

[162][TOP]
>UniRef100_C2AF84 SSU ribosomal protein S30P; sigma 54 modulation protein n=1
           Tax=Thermomonospora curvata DSM 43183 RepID=C2AF84_THECU
          Length = 221

 Score = 74.3 bits (181), Expect = 7e-12
 Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
 Frame = -1

Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT 357
           +I++GR+ E++D  ++HV++K+ + I++ +  +  VDV +S           R  R E+T
Sbjct: 3   IIVKGRHTEVNDRFREHVDNKLAK-IERFARKIIRVDVEVSEEHNPRLA--DRRERVELT 59

Query: 356 LYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH-GRHMKGPNRLKFSEVI 180
           + + R  V+RAE  AE  YG++DL    ++ +LR+  ++   H     + P +L   E +
Sbjct: 60  IRS-RGPVIRAEAAAEDRYGALDLALDKLEARLRRSADRRKIHYNSGTRAPAKLAHLEPL 118

Query: 179 LPLPSE-DEEDEIEITPQKDDEE--ELIEE---------------VVRTKYFDMPPLTVF 54
              P+    ED  E  P  +     E  EE               VVR K+    P+T+ 
Sbjct: 119 TEPPAAAPPEDSAEGAPAAEPAAATEPAEEGGNVVPIAMDGDGPLVVREKFHRSAPMTID 178

Query: 53  EAIDQLEMVDHDFYAFR 3
           +A+ ++E+V HDF+ FR
Sbjct: 179 QALYEMELVGHDFFLFR 195

[163][TOP]
>UniRef100_B0MGZ9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
           14662 RepID=B0MGZ9_9FIRM
          Length = 176

 Score = 74.3 bits (181), Expect = 7e-12
 Identities = 49/180 (27%), Positives = 98/180 (54%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +  II G+N+E+++ ++  +E+K+GR+     YL  ++D+ ++     E       ++ E
Sbjct: 1   MNFIISGKNIEVTEGIRAAIEEKLGRL---DKYLTDDIDIIVTLSVQKE------RQKIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K H ++RAE+ +   Y SIDLV  I++R++R+ K +              K+   
Sbjct: 52  VTIPMKGH-IIRAEQDSADMYVSIDLVIDILERQIRRYKTRLMSK----------KYEGA 100

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
            L     D+++++       DE+E+   ++R+K F + P+ V EA  Q++++ H+F+ FR
Sbjct: 101 GLKQEFIDKDEDV-------DEDEI--RIIRSKKFAIKPMDVEEACIQMDLLGHNFFVFR 151

[164][TOP]
>UniRef100_A7BEC8 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus
           ATCC 17982 RepID=A7BEC8_9ACTO
          Length = 214

 Score = 74.3 bits (181), Expect = 7e-12
 Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 18/195 (9%)
 Frame = -1

Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR----TRR 369
           + +  RN E+    +++VE+KV ++ Q +    R VDV L+        R PR      R
Sbjct: 3   ITVVARNAEIHPNFREYVEEKVSKITQFYPRAQR-VDVELTHE------RNPRQADTAER 55

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            E+T+Y K   ++RAE  +   Y ++D+ +  +  +LR+++++  DH R    P  L  +
Sbjct: 56  IELTVYGKGP-IIRAEAQSADRYAAVDIAAGKLYERLRRLRDRVKDHRRRY--PRDLAEA 112

Query: 188 EVI--------------LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFE 51
           E++               P P    ED +++   ++++      +VR K  + PP++V E
Sbjct: 113 EILEAPVVEETATFEPEAPKPLRSAED-LKVGEAREEQWGDTPIIVRQKVHEAPPMSVDE 171

Query: 50  AIDQLEMVDHDFYAF 6
           A+DQ+ MV H F+ F
Sbjct: 172 ALDQMMMVGHPFFLF 186

[165][TOP]
>UniRef100_A4ECY7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
           ATCC 25986 RepID=A4ECY7_9ACTN
          Length = 194

 Score = 74.3 bits (181), Expect = 7e-12
 Identities = 53/175 (30%), Positives = 82/175 (46%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           + GR   ++DA++ HV++K+G  ++        VDV L           P     EVT  
Sbjct: 5   VSGRKTTVTDALRAHVDEKIGEALKVFDIEPMTVDVVLRYEKNPS---NPNPAIVEVTAR 61

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
             R  V+R  EH    Y +IDL +  + R+LRK K K  D        NR   +      
Sbjct: 62  A-RGSVIRVAEHGADMYAAIDLSADKVTRQLRKFKTKVVD--------NRQGGASAADVA 112

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           P E  ED  ++   ++D++ L    VR K  D+ P+T  +A+ Q +++ HDFY F
Sbjct: 113 PVERVEDLADLLLPEEDDDLL----VREKVIDVTPMTEEQALVQTDLLGHDFYVF 163

[166][TOP]
>UniRef100_C0Z6T8 Putative uncharacterized protein yvyD n=1 Tax=Brevibacillus brevis
           NBRC 100599 RepID=C0Z6T8_BREBN
          Length = 185

 Score = 73.9 bits (180), Expect = 9e-12
 Identities = 52/180 (28%), Positives = 96/180 (53%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N++++ A++++VE KVGR ++K+    +  +V+++        RG  T    
Sbjct: 1   MKFNIRGENIQVTAALREYVEKKVGR-LEKYFETPQPTEVQVTMH----VHRGEGTIEVT 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           + L      ++RAEE  E  Y +IDLV   ++R++RK K K     R +    R+     
Sbjct: 56  IPLSGV---IIRAEETHEDMYAAIDLVVEKLERQIRKHKTKLMRKLR-VDSTGRI----- 106

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
                ++ E   + +     DEE++  ++VRTK FD+ P+   EA+ Q++M+ H F+ F+
Sbjct: 107 -----AQRESQPVAVMIPDVDEEDIDIDIVRTKRFDLKPMDAQEAVMQMDMLGHSFFVFQ 161

[167][TOP]
>UniRef100_A5UVY5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Roseiflexus sp. RS-1 RepID=A5UVY5_ROSS1
          Length = 193

 Score = 73.9 bits (180), Expect = 9e-12
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 1/179 (0%)
 Frame = -1

Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT 357
           LI++ RN ++S+  +QH+E K+ R+ +   YL R   V +          G    R +VT
Sbjct: 3   LIVKSRNGKISERQRQHIEQKLSRLDR---YLDRIAQVTVEHMEEMRRNEG-NVHRVQVT 58

Query: 356 LYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL 177
           +      +VRAE  A   Y +ID V   +QR++ + K+K   H R  +G  R +  +++ 
Sbjct: 59  VVGDHGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDK---HWR--RGKLRRQGGQIVE 113

Query: 176 PLPSEDEEDEIEITPQKD-DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
            LP      E+      D  EEE    +VRTK F + P+   EA++Q+E++ H+F+ F+
Sbjct: 114 ALP------ELAAPSLADTQEEEERPRIVRTKEFQVKPMYSDEAVEQMELLGHNFFIFQ 166

[168][TOP]
>UniRef100_C4FCG3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis
           DSM 13280 RepID=C4FCG3_9ACTN
          Length = 194

 Score = 73.9 bits (180), Expect = 9e-12
 Identities = 51/179 (28%), Positives = 88/179 (49%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +++ + GR   ++DA++ HV++K+G  ++         DV L           P     E
Sbjct: 1   MEIKVSGRKTTVTDALRAHVDEKIGEALKVFDIEPMTADVVLRYEKNPS---NPNPAIVE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+   R  V+R  EH    Y +IDL +  + R+LRK K +  D+ +       L  +EV
Sbjct: 58  VTVRA-RGSVIRVAEHGADMYAAIDLAAEKVTRQLRKFKTRVVDNRQQ-----GLSAAEV 111

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
               P E   D  ++   +D++++L    VR K  ++ P+T  EA+ Q +++ HDFY F
Sbjct: 112 A---PVEPVADLADLLLPEDEDDQL----VRVKEVELTPMTDEEALVQTDLIGHDFYVF 163

[169][TOP]
>UniRef100_B7IPV2 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
           RepID=B7IPV2_BACC2
          Length = 180

 Score = 73.9 bits (180), Expect = 9e-12
 Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++     E+ V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 52  VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            ILP          E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVMDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

[170][TOP]
>UniRef100_A5Z528 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
           ATCC 27560 RepID=A5Z528_9FIRM
          Length = 179

 Score = 73.9 bits (180), Expect = 9e-12
 Identities = 53/179 (29%), Positives = 95/179 (53%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K+ I G+N+E+++ ++  VE+K+G+ + K+      VDV LS             ++ E
Sbjct: 1   MKIKIFGKNIEVTEGIRSAVEEKIGK-LDKYFAEETRVDVTLSVN--------KNEQKVE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K   ++RAEE ++  Y SID+V   I+R+L K K K  D  + +K      F+E 
Sbjct: 52  VTIPVKGR-IIRAEEISDDMYVSIDMVEETIERQLVKYKNKIIDKKKSIKE----AFTET 106

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            +    EDE           DE+++  ++ +TK F + P+   EA  ++E++ H+F+ F
Sbjct: 107 YIEADYEDE-----------DEDQI--KIKKTKRFGIKPMDPEEACVEMELLGHNFFVF 152

[171][TOP]
>UniRef100_Q49VV1 Uncharacterized protein SSP1964 n=1 Tax=Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305
           RepID=Y1964_STAS1
          Length = 190

 Score = 73.9 bits (180), Expect = 9e-12
 Identities = 49/180 (27%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
           ++  I G N+ ++DA++ ++E+K+G++ +  + +      V++ T             + 
Sbjct: 2   IRFEIHGENLTITDAIRNYIEEKIGKLERYFNDVPNATAHVKVKTYQNS-------ATKI 54

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           EVT+  K+   +RAEE  +  Y  IDL+++ ++R++RK K +     R+ +G       E
Sbjct: 55  EVTIPLKKV-TLRAEERNDDLYAGIDLINNKLERQVRKYKTRVNRRNRN-RGEQ-----E 107

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
               LP E E  EI+    + D E    E++R K F + P+   EA+ Q++++ HDF+ F
Sbjct: 108 AFASLPEEKEAVEIQNDENEADNEI---EIIRAKNFSLKPMDSEEAVLQMDLLGHDFFIF 164

[172][TOP]
>UniRef100_Q5WDF7 Ribosomal protein S30EA n=1 Tax=Bacillus clausii KSM-K16
           RepID=Q5WDF7_BACSK
          Length = 184

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRCEVTL 354
           I+G N+E++ A+++++E KVG++ +        +V+V+L   G GE          EVT+
Sbjct: 5   IRGENIEVTPAIREYIEKKVGKLERYFDTTPTADVNVKLQVLGSGESS-------IEVTI 57

Query: 353 YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP 174
              +  ++R EE     Y +ID+V   ++R++RK K K     R  +G  +  F   + P
Sbjct: 58  PMPKL-LLRGEEINADMYAAIDIVVEKLERQIRKYKTKVNRKFRQ-EGSLKYMFKNELEP 115

Query: 173 LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           L  E  ED+           EL  EVVRTK F++ P+   EAI Q++++ H+F+ F
Sbjct: 116 LRDEVAEDD-----------EL--EVVRTKRFNLKPMDAEEAILQMDLLGHNFFVF 158

[173][TOP]
>UniRef100_B7GL70 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Anoxybacillus
           flavithermus WK1 RepID=B7GL70_ANOFW
          Length = 182

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 54/179 (30%), Positives = 93/179 (51%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A++++VE K+G+ ++++      V V ++ +   +     +  + E
Sbjct: 1   MKYNIRGENIEVTQAIREYVEKKIGK-LERYFESTEGVTVHVNLKVYND-----KQAKIE 54

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+   +  V+RAEE  +  Y +IDLV   ++R++RK K K     R  K  N +  +  
Sbjct: 55  VTIPMPQI-VLRAEERHDDMYAAIDLVVDKLERQIRKHKTKVNRKMRE-KEANGVTLTAT 112

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           +     E EE+E E              VVRTK F + P+   EAI Q+ M+ H+FY F
Sbjct: 113 VPVATEEHEEEEFE--------------VVRTKRFSLKPMDSEEAILQMNMLGHNFYVF 157

[174][TOP]
>UniRef100_B5UPY3 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
           RepID=B5UPY3_BACCE
          Length = 180

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++     E+ V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 52  VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            ILP          E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

[175][TOP]
>UniRef100_C7G8P2 Ribosomal subunit interface protein n=1 Tax=Roseburia intestinalis
           L1-82 RepID=C7G8P2_9FIRM
          Length = 176

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 51/179 (28%), Positives = 91/179 (50%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +++ I GRN+EL+D +K  VEDK+ ++     Y   + DV ++     E       ++ E
Sbjct: 1   MRIKITGRNIELTDGIKDAVEDKLNKL---EKYFTPDTDVYVTLSVEKE------RQKVE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K +  +R+E+ +   Y SIDLV  +I+R+L+K + K     +      +  F + 
Sbjct: 52  VTIPMKGN-YIRSEQVSNDMYVSIDLVEEVIERQLKKYRTKLVTKQQSAASVFKQDFLDA 110

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                              DD+EE+  +++R+K FDM P+   +A  Q+E++ HDF+ F
Sbjct: 111 A-----------------SDDDEEI--KIIRSKKFDMKPMYPEDACVQMELLGHDFFVF 150

[176][TOP]
>UniRef100_C2U573 Ribosome-associated factor Y n=3 Tax=Bacillus cereus
           RepID=C2U573_BACCE
          Length = 180

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++     E+ V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 52  VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            ILP          E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

[177][TOP]
>UniRef100_B7HEI9 Ribosomal subunit interface protein n=9 Tax=Bacillus cereus group
           RepID=B7HEI9_BACC4
          Length = 180

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++     E+ V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 52  VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF-- 106

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            ILP          E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

[178][TOP]
>UniRef100_A8W0Z3 Maf protein n=1 Tax=Bacillus selenitireducens MLS10
           RepID=A8W0Z3_9BACI
          Length = 197

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 55/180 (30%), Positives = 94/180 (52%)
 Frame = -1

Query: 545 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 366
           S+   I+G N+E++ A++ +VE KVG+ ++K+       DV +      +       ++ 
Sbjct: 14  SMNFNIRGENLEITPALRDYVEKKVGK-LEKYFETTPSSDVHV------KMSVVNTDQKV 66

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           E+T+   +  ++RAEE     Y ++DLV   ++R++RK K K     R  +G + LK+  
Sbjct: 67  EITIPMPKL-LLRAEEKHADMYAAVDLVIEKLERQIRKHKTKVN---RKFRGEDSLKYM- 121

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                 +E E    E TP  D       E+VRTK FD+ P+   EAI Q++M+ H+F+ F
Sbjct: 122 ----FKNELEPISEEETPDDD------YEIVRTKRFDLKPMDAEEAILQMDMLGHNFFVF 171

[179][TOP]
>UniRef100_C3AT15 Ribosome-associated factor Y n=3 Tax=Bacillus RepID=C3AT15_BACMY
          Length = 180

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++     EV V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEVKVNLKVYSDKQ--------RVE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   ++R++RK K K     R    P     + 
Sbjct: 52  VTIPFTDL--LLRAEETHSDMYAAIDLVVDKVERQIRKHKTKVNRKLREKGSPK----TA 105

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            IL  P+   E+       K+DE EL    VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 106 FILTEPAATLEEV------KEDELEL----VRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

[180][TOP]
>UniRef100_B7HX18 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
           RepID=B7HX18_BACC7
          Length = 180

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++     E+ V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F  
Sbjct: 52  VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            ILP          E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDQLELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

[181][TOP]
>UniRef100_Q72XS8 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
           RepID=Q72XS8_BACC1
          Length = 180

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++     E+ V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F  
Sbjct: 52  VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            ILP          E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

[182][TOP]
>UniRef100_B4VG26 Ribosomal subunit interface protein n=1 Tax=Streptomyces sp. Mg1
           RepID=B4VG26_9ACTO
          Length = 250

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
 Frame = -1

Query: 593 RRGAAS-ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVG-RVIQKHSYLVREVDVR 420
           R+G AS +  S+ G    V ++++GR  E+ +  ++HV +K+    IQK    V  +DV 
Sbjct: 2   RKGDASPLGRSYPGTEFCVDIVVKGRKTEVPERFRKHVAEKLNPERIQKLDAKVISLDVE 61

Query: 419 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 240
           +S        +  R+ R E+TL++ R  V+RAE  A   Y ++DL    ++ +LRK  +K
Sbjct: 62  VSKEHNPR--QADRSDRVEITLHS-RGPVIRAEAAAADAYAALDLAQDKLEARLRKQHDK 118

Query: 239 ETDHGRHMKGPNRLKFSEVILPLP------------SEDEEDEIEITP----QKDDEEEL 108
                   +G  RL  +EV   +P            +E++ D I  T     +   E  L
Sbjct: 119 RYTR----RGNGRLSAAEVADVVPGVAQLNGNGQPFTEEQADAIPTTRIGSLEVQGEGPL 174

Query: 107 IEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           I   VR K     P+++ +A+ ++E+V HDFY F
Sbjct: 175 I---VREKTHSAAPMSLDQALYEMELVGHDFYLF 205

[183][TOP]
>UniRef100_A5ZRI8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
           29174 RepID=A5ZRI8_9FIRM
          Length = 175

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 55/179 (30%), Positives = 91/179 (50%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K II G+N+ +S  +K  VEDK+G+ ++++     EV V LS             ++ E
Sbjct: 1   MKFIISGKNITVSQGLKTAVEDKLGK-LERYFTPDTEVVVTLSVE--------KERQKIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K + ++R+E+ +   Y SIDLV  +I+R+LRK K K  D     K      F + 
Sbjct: 52  VTIPMKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVD-----KQQAAANFQKE 105

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            L                KD EE+   +++RTK F + P+   +A  Q+E++ H+F+ F
Sbjct: 106 YL---------------DKDYEEDEEVKIIRTKKFGIKPMYPEDACVQMELLGHNFFVF 149

[184][TOP]
>UniRef100_B1IAC2 Ribosome-associated protein Y n=15 Tax=Streptococcus pneumoniae
           RepID=B1IAC2_STRPI
          Length = 182

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 50/179 (27%), Positives = 99/179 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +V  K+ + I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV+  I+R++RK K K     ++     +L F++ 
Sbjct: 56  VTIPLGSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQL-FTDA 113

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           ++                 +D   +  +VVR+K  D+ P+ + EAI Q++++ HDF+ +
Sbjct: 114 LV-----------------EDSNVVQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFIY 155

[185][TOP]
>UniRef100_UPI000196CE6C hypothetical protein CATMIT_02221 n=1 Tax=Catenibacterium mitsuokai
           DSM 15897 RepID=UPI000196CE6C
          Length = 193

 Score = 72.4 bits (176), Expect = 3e-11
 Identities = 48/180 (26%), Positives = 101/180 (56%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K+I++G+N+ ++DA++  +  K+  ++ K+  + ++V+ ++  R        P  ++ E
Sbjct: 16  MKVIVRGKNVTITDAIEDKITKKLA-LLDKYFIMGQDVEAKVLIR------TYPFGQKIE 68

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+ T+ + ++RAEE ++  Y +IDLV   ++R++RK K K +   ++    N+L F+  
Sbjct: 69  VTIPTE-YVLLRAEETSDDLYEAIDLVIDKLERQIRKYKTKLSRKSKN----NKLAFNIN 123

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
            L    E EE+++               VV+TK  +  P+ + EAI Q+E++ H F+ ++
Sbjct: 124 TLEALEEPEEEDV---------------VVKTKTINPKPMDMEEAIMQMELIGHSFFVYK 168

[186][TOP]
>UniRef100_C6D4V5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Paenibacillus sp. JDR-2 RepID=C6D4V5_PAESJ
          Length = 182

 Score = 72.4 bits (176), Expect = 3e-11
 Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 3/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K II+G  +++++A++++   K+ R+ +       E  V LS   G            E
Sbjct: 1   MKYIIRGHRIQVTEALREYAVKKISRLEKYFEAPASETTVTLSVTKG--------KHAVE 52

Query: 362 VTLYTKRHGVV-RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+     GV+ RAE+ +E  Y SID+V   ++R++RK K K     RH  G   L F E
Sbjct: 53  VTIPLV--GVMLRAEDKSEDMYSSIDVVVDKLERQIRKHKTKMNRKFRHESGVKAL-FKE 109

Query: 185 VI--LPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
            +    +   DEEDE+E+              VRTK F + P+ V EAI Q+ MV H+F+
Sbjct: 110 GLSQTAVSVMDEEDELEL--------------VRTKRFMLKPMDVEEAILQMNMVGHNFF 155

Query: 11  AF 6
            F
Sbjct: 156 VF 157

[187][TOP]
>UniRef100_B5E3V2 Ribosomal subunit interface protein n=1 Tax=Streptococcus
           pneumoniae G54 RepID=B5E3V2_STRP4
          Length = 182

 Score = 72.4 bits (176), Expect = 3e-11
 Identities = 50/179 (27%), Positives = 99/179 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +V  K+ + I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV+  I+R++RK K K     ++     +L F++ 
Sbjct: 56  VTIPLGSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQL-FTDA 113

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           ++                 +D   +  +VVR+K  D+ P+ + EAI Q++++ HDF+ +
Sbjct: 114 LV-----------------EDSNIVQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFXY 155

[188][TOP]
>UniRef100_A9AY42 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Herpetosiphon aurantiacus ATCC 23779
           RepID=A9AY42_HERA2
          Length = 186

 Score = 72.4 bits (176), Expect = 3e-11
 Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 4/180 (2%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVRE--VDVRLST-RGGGEFGRGPRTRRCEV 360
           I+ RN++L DA K  +++K+G+ ++++   + +  V+ R  T RG GE      T   + 
Sbjct: 5   IKSRNIKLHDAQKAFIQEKLGK-LERYLDGINDWKVECRFETLRGSGE------TYTVQA 57

Query: 359 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI 180
           TL      ++RAEE     Y +++ V   +QR++R+ KEK      + +G  R    E+I
Sbjct: 58  TLLADHGIILRAEERDRELYAAVEAVHDNLQRQIRRFKEKH-----YRRGKLRRTAGEII 112

Query: 179 L-PLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
             PLP+  E          D E+    +++R K   + P+   EAI+Q+E++ H F+ FR
Sbjct: 113 AAPLPALPE----------DAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFVFR 162

[189][TOP]
>UniRef100_C9L411 Ribosomal subunit interface protein n=1 Tax=Blautia hansenii DSM
           20583 RepID=C9L411_RUMHA
          Length = 176

 Score = 72.4 bits (176), Expect = 3e-11
 Identities = 55/179 (30%), Positives = 93/179 (51%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K II G+N+E++  ++  VEDK+G+ ++K+     E+ V LS             ++ E
Sbjct: 1   MKFIISGKNIEVTQGLRSAVEDKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K + ++R+E+ +   Y SIDLV  II+R+LRK K K  D  +      + +F E 
Sbjct: 52  VTIPVKGN-IIRSEQVSSDMYVSIDLVEEIIERQLRKYKNKIID--KKQSAGFQPEFVE- 107

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                 + EED  EI            +++RTK F   P+   +A  Q+E++ H+F+ F
Sbjct: 108 -----KDYEEDTNEI------------KIIRTKKFGFKPMYPEDACVQMELLGHNFFVF 149

[190][TOP]
>UniRef100_B6G8G1 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM
           13279 RepID=B6G8G1_9ACTN
          Length = 194

 Score = 72.4 bits (176), Expect = 3e-11
 Identities = 50/179 (27%), Positives = 88/179 (49%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +++ + GR   ++DA++ HV++K+G  ++         DV L           P     E
Sbjct: 1   MEIKVSGRKTTVTDALRAHVDEKIGEALKVFDIEPMTADVVLRYEKNPS---NPNPAIVE 57

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+   R  V+R  EH    Y +IDL +  + R+LRK K +  D+ +       L  +EV
Sbjct: 58  VTVRA-RGSVIRVAEHGADMYAAIDLAADKVTRQLRKFKTRVVDNRQQ-----GLSAAEV 111

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
               P  D  D +   P+++D++     +VR K  ++ P+T  +A+ Q +++ HDFY F
Sbjct: 112 APVEPVADLADLL--IPEEEDDQ-----LVRVKEIELTPMTEEQALVQTDLLGHDFYVF 163

[191][TOP]
>UniRef100_C1CNI0 Ribosome-associated protein Y n=9 Tax=Streptococcus pneumoniae
           RepID=C1CNI0_STRZP
          Length = 182

 Score = 72.4 bits (176), Expect = 3e-11
 Identities = 50/179 (27%), Positives = 99/179 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +V  K+ + I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV+  I+R++RK K K     ++     +L F++ 
Sbjct: 56  VTIPLGSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQL-FTDA 113

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           ++                 +D   +  +VVR+K  D+ P+ + EAI Q++++ HDF+ +
Sbjct: 114 LV-----------------EDSNIVQSKVVRSKQIDLKPMDLEEAILQMDLLGHDFFIY 155

[192][TOP]
>UniRef100_C1CBI3 Ribosome-associated protein Y n=1 Tax=Streptococcus pneumoniae
           70585 RepID=C1CBI3_STRP7
          Length = 182

 Score = 72.0 bits (175), Expect = 4e-11
 Identities = 50/179 (27%), Positives = 98/179 (54%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +V  K+ + I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKYSIRGENLEVTEAIRDYVVSKLEK-IEKYFQPEQELDARINLKVYRE-----KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ ++  YGSIDLV+  I+R++RK K K     ++     +L F++ 
Sbjct: 56  VTIPLGSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIERKNKNKVATGQL-FTDA 113

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           ++                 +D   +  +VVR K  D+ P+ + EAI Q++++ HDF+ +
Sbjct: 114 LV-----------------EDSNVVQSKVVRLKQIDLKPMDLEEAILQMDLLGHDFFIY 155

[193][TOP]
>UniRef100_B5XMH0 Ribosomal subunit interface protein n=1 Tax=Streptococcus pyogenes
           NZ131 RepID=B5XMH0_STRPZ
          Length = 182

 Score = 71.6 bits (174), Expect = 5e-11
 Identities = 56/179 (31%), Positives = 97/179 (54%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +VE K+ + I+K+    +E+D R++ +   E     R+ + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAE+ +   YGSI LV   I+R++RK K K     R  K P    F+  
Sbjct: 56  VTIPLDSV-TLRAEDVSXDMYGSIXLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-- 111

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                +E E +E++  P+         +VVRTK   + P+ V EA  Q+E++ HDF+ +
Sbjct: 112 -----TEFEAEEVDEIPEV--------QVVRTKNVTLKPMDVEEARLQMELLGHDFFIY 157

[194][TOP]
>UniRef100_A8M3Q2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Salinispora arenicola CNS-205 RepID=A8M3Q2_SALAI
          Length = 208

 Score = 71.6 bits (174), Expect = 5e-11
 Identities = 50/189 (26%), Positives = 96/189 (50%), Gaps = 11/189 (5%)
 Frame = -1

Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT----RR 369
           ++++GRN+E+ D  + HV +K+ + I+++ + V  VDV L         R PR     +R
Sbjct: 3   IVVKGRNVEVPDHYRVHVAEKLAK-IERYDHKVIRVDVELFHE------RNPRQSDHCQR 55

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMK-----GP 207
            E+T ++ R  V+RAE      Y ++D   + +  ++R+  ++    HGRH         
Sbjct: 56  VEITCFS-RGPVMRAEACTSDFYSALDAAIARLDTRMRRAADRRRVHHGRHAPISVAAAT 114

Query: 206 NRLKFSEVIL-PLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEM 30
            RL  ++++  PL  +     +     +++ ++    + R K     P+TV +A+ Q+E+
Sbjct: 115 ARLPVTDLVAAPLSHDGATATVAAERPEEERDDQPWHIAREKVHPAEPMTVDDALFQMEL 174

Query: 29  VDHDFYAFR 3
           V HDFY F+
Sbjct: 175 VGHDFYLFQ 183

[195][TOP]
>UniRef100_C8P6S3 Ribosomal subunit interface protein n=1 Tax=Lactobacillus antri DSM
           16041 RepID=C8P6S3_9LACO
          Length = 179

 Score = 71.6 bits (174), Expect = 5e-11
 Identities = 53/180 (29%), Positives = 94/180 (52%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++DA++ +V  ++ + +QK      E    ++ +         RT + E
Sbjct: 2   LKFNIRGENVEVTDAIRDYVVKRISK-LQKFFEDSVEATAHVNLKVYPN-----RTYKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+    +  +RAEE +   YGS+DLV+  ++R++RK K K     R  KG   L+F   
Sbjct: 56  VTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF--- 110

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
              +PS+D+    E+            ++VRTK   + P+   EA+ Q++M+ HDF+ F+
Sbjct: 111 ---VPSDDDAASDEL------------KIVRTKQVSLKPMDPEEAVLQMDMLGHDFFVFQ 155

[196][TOP]
>UniRef100_A9VQA3 Sigma 54 modulation protein/ribosomal protein S30EA n=2
           Tax=Bacillus cereus group RepID=A9VQA3_BACWK
          Length = 180

 Score = 71.6 bits (174), Expect = 5e-11
 Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++     E+ V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 52  VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF-- 106

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            ILP          E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155

[197][TOP]
>UniRef100_C2ETD9 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
           vaginalis ATCC 49540 RepID=C2ETD9_9LACO
          Length = 189

 Score = 71.6 bits (174), Expect = 5e-11
 Identities = 51/188 (27%), Positives = 100/188 (53%), Gaps = 3/188 (1%)
 Frame = -1

Query: 557 GPLSSVKLIIQGRNMELSDAVKQHVEDKVGRV---IQKHSYLVREVDVRLSTRGGGEFGR 387
           G ++ +K  I+G N+E++D+++ +V  ++ ++    + +      V++++          
Sbjct: 6   GEITMLKFNIRGENIEVTDSIRDYVVKRINKLQKFFEDNVEATAHVNLKVYPN------- 58

Query: 386 GPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP 207
             RT + EVT+    +  +RAEE +   YGS+DLV+  ++R++RK K K     R  KG 
Sbjct: 59  --RTYKVEVTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGF 114

Query: 206 NRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMV 27
             L+F      +P++D+ +       +DD      ++VRTK   + P+   EA+ Q++M+
Sbjct: 115 KSLEF------VPTDDDAE------SQDD-----LKIVRTKQISLKPMDPEEAVLQMDML 157

Query: 26  DHDFYAFR 3
            HDF+ F+
Sbjct: 158 GHDFFVFQ 165

[198][TOP]
>UniRef100_C0GF81 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF81_9FIRM
          Length = 177

 Score = 71.6 bits (174), Expect = 5e-11
 Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +KLI++G+N+E+++A++++V  ++G+ I K+  +  E  V L+   G          R E
Sbjct: 1   MKLILRGKNIEVTNALEEYVNKRIGK-IDKYFDVDTEAQVTLTVEHG--------MHRVE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIK---EKETDHGRHMKGPNRLKF 192
           VT   +   ++RAEE     Y SID V   ++R++ K K    ++   G  +K  N L  
Sbjct: 52  VTAAIEGM-ILRAEESTGDMYASIDSVVDKLERQIAKYKTRINRKARQGGGIKAMNEL-- 108

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
                              PQ +DEEE   +VV+TK F + P+ V EAI Q+ ++ HDF+
Sbjct: 109 -------------------PQVEDEEE-DWDVVKTKRFVVKPMPVEEAILQMNLLGHDFF 148

Query: 11  AF 6
            F
Sbjct: 149 VF 150

[199][TOP]
>UniRef100_B7GE66 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
           RepID=B7GE66_PHATR
          Length = 209

 Score = 71.6 bits (174), Expect = 5e-11
 Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 8/190 (4%)
 Frame = -1

Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQK--HSYLVREVDVRLSTRGGGEFGRGPRT 375
           + V +II G+N+EL+ A+ +HV  ++G  I K   +  ++E DV LS     +   G   
Sbjct: 9   TEVPVIINGQNIELTPALVEHVNKRIGGQINKLASNGAIQECDVILSVSKNPKVKNG--- 65

Query: 374 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNR 201
            R EV    K   ++   E  +  Y SID  S  + RKL K K+      HG    G + 
Sbjct: 66  HRVEVVTNLKGTSIICHNESPDM-YASIDAASHALYRKLCKYKDNRVAGWHGGEKMGNDI 124

Query: 200 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEE---VVRTKYFDMP-PLTVFEAIDQLE 33
           +   EV+     E+ ED  E T     EE +  E   + + K FD+  P++V EA+  L+
Sbjct: 125 M---EVL-----ENLEDVSEYTATPVAEEYVDPEAPTITKVKNFDLTKPMSVQEAVFALD 176

Query: 32  MVDHDFYAFR 3
            +DHDFY FR
Sbjct: 177 YIDHDFYVFR 186

[200][TOP]
>UniRef100_Q1AVJ5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ5_RUBXD
          Length = 189

 Score = 71.2 bits (173), Expect = 6e-11
 Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 7/186 (3%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEF--GRGPRTRR 369
           ++++++GRN+ ++D+++++  +KV RV +         D R   R   E    R P    
Sbjct: 1   MEIVVKGRNIPVTDSLERYAVEKVERVRKFFD------DDRSVARAEVELIHERNPSIAA 54

Query: 368 CEVTLYTK--RHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNR 201
            EV   T      V++A E +E  Y SID +S  ++R++++ + ++ D  HGR       
Sbjct: 55  SEVAETTLFINGAVLKAREASEDMYASIDRMSDKLERQVKRYRGRQVDRWHGR------- 107

Query: 200 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVD 24
           LK            E    E  P   +EEE IE  +VRTK F M P++  EA+ Q+E++D
Sbjct: 108 LK----------NHEGARAEPQPFVAEEEEDIEPRIVRTKQFQMKPMSAEEAVLQMELLD 157

Query: 23  HDFYAF 6
           HDF+ F
Sbjct: 158 HDFFVF 163

[201][TOP]
>UniRef100_C5QVF5 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus
           epidermidis W23144 RepID=C5QVF5_STAEP
          Length = 189

 Score = 71.2 bits (173), Expect = 6e-11
 Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 2/181 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
           ++  I G N+ ++DA++ ++E+KVG++ +  + +   V  VR+ T           T + 
Sbjct: 2   IRFEIHGDNLTITDAIRNYIEEKVGKLERYFNNVPNAVAHVRVKTYSNS-------TTKI 54

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           EVT+  K    +RAEE  +  Y  IDL+++ ++R++RK K +     R  +G   +  +E
Sbjct: 55  EVTIPLK-DVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRVNRKHRD-RGDQDIFVAE 112

Query: 185 VILPLPSEDEEDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
           V           E     Q DD E E   E++R+K F + P+   EA+ Q+ ++ HDF+ 
Sbjct: 113 V----------QESTANNQADDIESENDIEIIRSKQFSLKPMDSEEAVLQMNLLGHDFFI 162

Query: 8   F 6
           F
Sbjct: 163 F 163

[202][TOP]
>UniRef100_C5QQC2 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus
           epidermidis M23864:W1 RepID=C5QQC2_STAEP
          Length = 191

 Score = 71.2 bits (173), Expect = 6e-11
 Identities = 46/180 (25%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
           ++  I G N+ ++DA++ ++E+K+G++ +  + +   V  V++ T             + 
Sbjct: 2   IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYSNS-------ATKI 54

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           EVT+  K    +RAEE  +  Y  IDL+++ ++R++RK K +     R  +G   +  +E
Sbjct: 55  EVTIPLK-DVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRVNRKHRD-RGDQEVFVAE 112

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           V      E   +E+    + D++ ++  E++R+K F + P+   EA+ Q+ ++ HDF+ F
Sbjct: 113 V-----QEATPEEVSGAEEPDNDSDI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIF 165

[203][TOP]
>UniRef100_C9RVC1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
           Tax=Geobacillus RepID=C9RVC1_9BACI
          Length = 182

 Score = 71.2 bits (173), Expect = 6e-11
 Identities = 51/175 (29%), Positives = 97/175 (55%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           ++G N+E++ A++++VE K+G+ ++++     +V+V ++ +   + G+G    + EVT+ 
Sbjct: 5   VRGENIEVTPALREYVEKKIGK-LERYFDRTDDVNVHVNLKVYND-GQG----KIEVTIP 58

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
              H ++RAEE  E  Y +IDLV+  ++R++RK K K     R  +   +L     I   
Sbjct: 59  IP-HLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKVNRKLRDREKEAKLAAPVSIGAS 117

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            +E+EE+                E+VRTK+F + P+   EAI Q+ ++ H+F+ F
Sbjct: 118 AAENEEEF---------------EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157

[204][TOP]
>UniRef100_C2SSP0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus BDRD-ST196
           RepID=C2SSP0_BACCE
          Length = 180

 Score = 71.2 bits (173), Expect = 6e-11
 Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++     E+ V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 52  VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF-- 106

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            ILP          E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155

[205][TOP]
>UniRef100_C2Q3D0 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
           RepID=C2Q3D0_BACCE
          Length = 180

 Score = 71.2 bits (173), Expect = 6e-11
 Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++     E+ V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F  
Sbjct: 52  VTIPFTDL--LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF-- 106

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            ILP          E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVF 155

[206][TOP]
>UniRef100_C0CJV5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
           DSM 10507 RepID=C0CJV5_9FIRM
          Length = 175

 Score = 71.2 bits (173), Expect = 6e-11
 Identities = 54/179 (30%), Positives = 94/179 (52%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +  II G+N+ ++D ++  VEDK+G+ ++++     E+ V LS     +        + E
Sbjct: 1   MNFIISGKNLTVTDGLRTAVEDKLGK-LERYFTPDTEIIVTLSVEKSRQ--------KIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K + ++R+E+ +   Y SIDLV  +I+R+LRK K K  D  +   G +   F + 
Sbjct: 52  VTIPVKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKTKIVD--KEKAGDH---FQKA 105

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            +    E EEDE++I               RTK FD+ P+   +A  Q+E++ H+F+ F
Sbjct: 106 FIEKEYE-EEDEVKIQ--------------RTKKFDIKPMYPEDACVQMELLGHNFFVF 149

[207][TOP]
>UniRef100_A0RKX8 Sigma 54 modulation protein / SSU ribosomal protein S30P n=26
           Tax=Bacillus cereus group RepID=A0RKX8_BACAH
          Length = 180

 Score = 71.2 bits (173), Expect = 6e-11
 Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++     E+ V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F  
Sbjct: 52  VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF-- 106

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            ILP          E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

[208][TOP]
>UniRef100_A9BI17 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Petrotoga mobilis SJ95 RepID=A9BI17_PETMO
          Length = 199

 Score = 70.9 bits (172), Expect = 8e-11
 Identities = 48/182 (26%), Positives = 96/182 (52%), Gaps = 9/182 (4%)
 Frame = -1

Query: 521 RNMELSDAVKQHVEDKVGR---VIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           + +EL++A++ ++E ++ +   +++KH  +V   DVR++   G          + E+T +
Sbjct: 8   KEVELTEALENYIEKRMSKPDHLLKKHPDIVSPSDVRITKERG--------IYKVEITTH 59

Query: 350 TKRHG-VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK-----ETDHGRHMKGPNRLKFS 189
                 +++ EE +   Y +ID V+  ++RK+RK+K +      TD    M+    L+  
Sbjct: 60  INPLSKIIKVEERSNDLYEAIDEVTDSLERKIRKLKNRLQEQSRTDKKARMEIEQNLQNP 119

Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
           ++     +E+ E EIE  P          ++VRTK FD+  ++V EA+ Q++++ H F+ 
Sbjct: 120 DIKNLDLAEENESEIEEKPDAP-------KIVRTKNFDLTLMSVEEAMLQMQLLGHSFFV 172

Query: 8   FR 3
           FR
Sbjct: 173 FR 174

[209][TOP]
>UniRef100_Q2B1U0 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. NRRL
           B-14911 RepID=Q2B1U0_9BACI
          Length = 184

 Score = 70.9 bits (172), Expect = 8e-11
 Identities = 53/175 (30%), Positives = 93/175 (53%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           I+G N+E++ A++++VE K+ + ++K+     + +V ++ +            + EVT+ 
Sbjct: 5   IRGENIEVTPAIREYVEKKIAK-LEKYFTETPDANVHVNLKTYNN-----NRSKVEVTI- 57

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
             ++ V+RAEE  E  Y +IDL+   ++R++RK K K     R  KG   L F+      
Sbjct: 58  PMQNLVLRAEEDHEDMYAAIDLIVDKLERQIRKHKTKVNRKFRE-KGSPTLMFASF---- 112

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                 DE E    ++++ +L  EVVR K FD+ P+   EAI Q+ ++ H FY F
Sbjct: 113 ------DEPEAPVLEEEDNDL--EVVRQKSFDLKPMDNEEAILQMNLLGHSFYVF 159

[210][TOP]
>UniRef100_C2ZFA1 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
           RepID=C2ZFA1_BACCE
          Length = 180

 Score = 70.9 bits (172), Expect = 8e-11
 Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++     E+ V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F  
Sbjct: 52  VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF-- 106

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            ILP          E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

[211][TOP]
>UniRef100_C2YZ14 Ribosome-associated factor Y n=1 Tax=Bacillus cereus AH1271
           RepID=C2YZ14_BACCE
          Length = 180

 Score = 70.9 bits (172), Expect = 8e-11
 Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++     E+ V L      +        R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F  
Sbjct: 52  VTIPFTDL--LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF-- 106

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            ILP          E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 107 -ILP----------EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

[212][TOP]
>UniRef100_C2WEE0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus Rock3-44
           RepID=C2WEE0_BACCE
          Length = 180

 Score = 70.9 bits (172), Expect = 8e-11
 Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++     E+ V L              +R E
Sbjct: 1   MKFNIRGENIEVTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYS--------EKQRVE 51

Query: 362 VTL-YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           VT+ +T    ++RAEE     Y +IDLV   I+R++RK K K     R    P       
Sbjct: 52  VTIPFTDL--LLRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLREKGSPKTTFILT 109

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                  E +ED++E+              VRTK FD+ P+ V EAI Q++M+ H+F+ F
Sbjct: 110 ESAATLEEVKEDDLEL--------------VRTKRFDLKPMDVEEAILQMDMLGHNFFVF 155

[213][TOP]
>UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
           29176 RepID=B5CNW3_9FIRM
          Length = 186

 Score = 70.9 bits (172), Expect = 8e-11
 Identities = 54/179 (30%), Positives = 92/179 (51%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +  II G+N+E++  +K  +E K+G+ ++++     E++V LS   G +        + E
Sbjct: 1   MNFIISGKNIEVTPGLKDAIEQKLGK-LERYFTPETEINVTLSVEKGRQ--------KIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K + ++R+E+ ++  Y SIDLV  +I+R+LRK K K     R    P     S  
Sbjct: 52  VTIPVKGN-IIRSEQTSDNMYVSIDLVEEVIERQLRKYKNKLV--ARSQGHPT----SYT 104

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                   E  E E    +DDE     ++VRTK F + P+   +A  Q+E++ H F+ F
Sbjct: 105 STGNSFRKEFFETEDDAAEDDE----IQIVRTKKFGIKPMFPEDACIQMELLGHSFFVF 159

[214][TOP]
>UniRef100_P47995 Uncharacterized protein Sca_0400 n=1 Tax=Staphylococcus carnosus
           subsp. carnosus TM300 RepID=Y400_STACT
          Length = 188

 Score = 70.9 bits (172), Expect = 8e-11
 Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           ++  I G N+ ++DA++ ++EDKVG+ ++++   V  V+  +  +          + + E
Sbjct: 2   IRFEIHGDNLTITDAIRNYIEDKVGK-LERYFTNVPNVNAHVKVKTYAN-----SSTKIE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+       +RAEE  +  Y  IDL+++ ++R++RK K +           NR K  E 
Sbjct: 56  VTI-PLNDVTLRAEERNDDLYAGIDLITNKLERQVRKYKTRV----------NRKKRKES 104

Query: 182 IL-PLPSEDEED-EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
              P P+  E   E  +   KDDE E+I    R+K F + P+   EA+ Q++++ HDF+ 
Sbjct: 105 EHEPFPATPETPPETAVDHDKDDEIEII----RSKQFSLKPMDSEEAVLQMDLLGHDFFI 160

Query: 8   F 6
           F
Sbjct: 161 F 161

[215][TOP]
>UniRef100_Q1WSW6 Ribosome-associated factor Y n=1 Tax=Lactobacillus salivarius
           UCC118 RepID=Q1WSW6_LACS1
          Length = 184

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 52/179 (29%), Positives = 94/179 (52%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K+ ++G N+E++ A++++VE ++ ++     +     D   ST          +T + E
Sbjct: 2   LKINVRGENIEVTGAIREYVEKRLAKL---EKFFDNTAD---STAHVNLKVYSDKTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+    + V+RAEE +   Y SIDLV+  ++R++RK K K     R  KG    +F+  
Sbjct: 56  VTIPLP-YLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKNFEFA-- 111

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
               P  DE++E+E         +   E+VRTK   + P+   EA+ Q++M+ HDF+ +
Sbjct: 112 ----PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGHDFFIY 157

[216][TOP]
>UniRef100_C5D7S1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Geobacillus sp. WCH70 RepID=C5D7S1_GEOSW
          Length = 182

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 48/175 (27%), Positives = 99/175 (56%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           I+G N+E++ A++++VE K+G+ ++++     ++ V ++ +   +     +  + EVT+ 
Sbjct: 5   IRGENIEVTPALREYVEKKIGK-LERYFENTEDIHVHVNLKVYND-----KQGKIEVTIP 58

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
             +  ++RAEE  +  Y +IDLV+  ++R++RK K K            +L+  E    L
Sbjct: 59  MPQL-LLRAEERHDDMYAAIDLVADKLERQIRKHKTKVN---------RKLRNKETKQVL 108

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            +++    +E    +++EEE   E+VRTK+F + P+   EAI Q+ ++ H+F+ F
Sbjct: 109 VTQNNNPPVE----ENEEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157

[217][TOP]
>UniRef100_C9YZK5 Putative uncharacterized protein n=1 Tax=Streptomyces scabiei 87.22
           RepID=C9YZK5_STRSC
          Length = 241

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVG-RVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 366
           V ++++GR  E+ +  ++HV +K+    IQK    V  +DV +S        +  R+ R 
Sbjct: 12  VDIVVKGRKTEVPERFRKHVAEKLKLEKIQKLDGKVISLDVEVSKEPNPR--QADRSDRV 69

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           E+TL++ R  V+RAE  A   Y ++DL +  ++ +LRK  +K        +G  RL  +E
Sbjct: 70  EITLHS-RGPVIRAEAAASDPYAALDLAADKLEARLRKQHDKRYTR----RGARRLTAAE 124

Query: 185 VILPLPS----------EDEEDEIEITPQKDDEEELIEE---VVRTKYFDMPPLTVFEAI 45
           V   +P            DEE    +  +K    E+  E   +VR K     P+T+ +A+
Sbjct: 125 VADHVPGVATLNGNGYVADEEKAEGVPTKKIGSLEVKGEGPLIVREKTHVASPMTLDQAL 184

Query: 44  DQLEMVDHDFYAF 6
            ++E+V HDFY F
Sbjct: 185 YEMELVGHDFYLF 197

[218][TOP]
>UniRef100_C4W9L5 Ribosomal subunit interface protein n=1 Tax=Staphylococcus warneri
           L37603 RepID=C4W9L5_STAWA
          Length = 191

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 47/180 (26%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
           ++  I G N+ ++DA++ ++E+K+G++ +  + +   V  V++ T           T + 
Sbjct: 2   IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYSNS-------TTKV 54

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           EVT+  K    +RAEE  +  Y  +DL+++ ++R++RK K +     R  +G   +  +E
Sbjct: 55  EVTIPLK-DVTLRAEERHDDLYAGVDLITNKLERQVRKYKTRVNRKHRD-RGDQEVFVAE 112

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           V      E   +EI    + +D +    E++R+K F + P+   EA+ Q+ ++ HDF+ F
Sbjct: 113 V-----QEAPPEEISGAEENNDNDI---EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIF 164

[219][TOP]
>UniRef100_C2KSB4 Ribosome-associated inhibitor protein Y n=1 Tax=Mobiluncus mulieris
           ATCC 35243 RepID=C2KSB4_9ACTO
          Length = 209

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 15/194 (7%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR----T 375
           +++ ++ RN E+    +++VE+K+ +V Q      R VDV L+        R PR     
Sbjct: 1   MEITLKARNAEIHPNFREYVEEKIAKVEQLAPRTQR-VDVELTHE------RNPRQVDTA 53

Query: 374 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN--- 204
            R E+T++ K   VVRAE  +   Y ++D+ +  +  +LR+ +++  +H R+   P+   
Sbjct: 54  ERIEITVHGKGP-VVRAEASSSDRYAAVDIAAGKLYERLRRARDRIKNHRRYDIPPDVDL 112

Query: 203 -------RLKFSEVILPL-PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEA 48
                  + K + V  PL P E  ED++  +P           +VR K  +  P++V EA
Sbjct: 113 DVAMPEPQAKPAPVRAPLKPGEVREDQLGDSPV----------IVREKLHETTPVSVEEA 162

Query: 47  IDQLEMVDHDFYAF 6
           +D++E+V H FY F
Sbjct: 163 LDEMELVGHPFYLF 176

[220][TOP]
>UniRef100_C2EGB2 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
           salivarius ATCC 11741 RepID=C2EGB2_9LACO
          Length = 184

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 52/179 (29%), Positives = 94/179 (52%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K+ ++G N+E++ A++++VE ++ ++     +     D   ST          +T + E
Sbjct: 2   LKINVRGENIEVTGAIREYVEKRLAKL---EKFFDNTAD---STAHVNLKVYSDKTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+    + V+RAEE +   Y SIDLV+  ++R++RK K K     R  KG    +F+  
Sbjct: 56  VTIPLP-YLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKNFEFA-- 111

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
               P  DE++E+E         +   E+VRTK   + P+   EA+ Q++M+ HDF+ +
Sbjct: 112 ----PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGHDFFIY 157

[221][TOP]
>UniRef100_C0W8H6 Ribosome-associated inhibitor protein Y n=1 Tax=Actinomyces
           urogenitalis DSM 15434 RepID=C0W8H6_9ACTO
          Length = 214

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 14/191 (7%)
 Frame = -1

Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR----TRR 369
           + + GRN E+S  ++ +VE+K  +V ++    V+ V+V ++        R PR      R
Sbjct: 3   ITVVGRNAEISSRLRDYVEEKATKV-EQFDPRVQRVEVEVTHE------RNPRQADTAER 55

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            E+T+ +K   ++RAE  +   + + D+    +  +LR+ ++++ DH R+         +
Sbjct: 56  AEITVISKGP-IIRAEASSSDRFAAFDIAMGKLTERLRRARDRKKDHRRYPVDVPEGTQA 114

Query: 188 EVILPLPSEDEEDE--IEITPQKDDEEELIEE--------VVRTKYFDMPPLTVFEAIDQ 39
                L S  E D+  IE +P+   E+ +  E        +VR K  D  P+TV EA+ Q
Sbjct: 115 PAAEELRSLHETDDAPIEDSPKAPTEKGVAVESQLGDSPVIVRQKLHDATPMTVDEALYQ 174

Query: 38  LEMVDHDFYAF 6
           +E+V H FY F
Sbjct: 175 MELVGHPFYLF 185

[222][TOP]
>UniRef100_Q9K6W6 Ribosomal protein S30AE family n=1 Tax=Bacillus halodurans
           RepID=Q9K6W6_BACHD
          Length = 187

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 1/176 (0%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRCEVTL 354
           ++G N+E++ A++++VE KVG++ +      V +V+VR+                 EVT+
Sbjct: 5   VRGENLEVTPALREYVEKKVGKLERYFDTTPVADVNVRMQVLNNLHI--------IEVTI 56

Query: 353 YTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP 174
              R  ++RAEE     Y +IDLV   ++R++RK K K     R  +G  +  F   + P
Sbjct: 57  PMSRL-LLRAEEKHSDMYAAIDLVIEKLERQIRKHKTKVNRKFRQ-EGSLKYMFKNDLEP 114

Query: 173 LPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           +    EE  +E      +E++L  +VVR K F++ P+   EAI Q++M+ H+F+ F
Sbjct: 115 MDGMREEILLE------EEDDL--QVVRKKRFNLKPMDTEEAILQMDMLGHNFFVF 162

[223][TOP]
>UniRef100_C7XW84 Sigma 54 modulation protein/SSU ribosomal protein S30P n=1
           Tax=Lactobacillus coleohominis 101-4-CHN
           RepID=C7XW84_9LACO
          Length = 179

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 53/180 (29%), Positives = 91/180 (50%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N++L+DA++ +VE ++ ++   + +L   VD   +T          +T + E
Sbjct: 2   LKFNIRGENVDLTDAIRDYVEKRISKI---NKFLEDNVD---ATAHVNLKVYKNKTFKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+    +  +RAEE +   Y SIDLV+  ++R++RK K K     R  KG   L+F   
Sbjct: 56  VTIPLP-YLTLRAEETSNDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGLKNLEF--- 110

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
                           P  D  E+   ++VRTK   + P+   EA+ Q++M+ HDF+ F+
Sbjct: 111 ---------------VPGDDGTEDDSLKIVRTKEISLKPMDSEEAVLQMDMLGHDFFIFQ 155

[224][TOP]
>UniRef100_C7ME61 SSU ribosomal protein S30P/sigma 54 modulation protein n=1
           Tax=Brachybacterium faecium DSM 4810 RepID=C7ME61_BRAFD
          Length = 219

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 17/196 (8%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR----T 375
           +++ + GR+M++ D  ++H+ DK+ +V Q     +R VDV +S        + PR    +
Sbjct: 1   MEINVVGRHMDVPDRFRRHLTDKLDKVTQLAPAALR-VDVEISQE------KNPRQAELS 53

Query: 374 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR------HMK 213
            R E+T++ +   V+R+E  A+  YG++D+    +  +LR+ +++  DH R        K
Sbjct: 54  DRVELTVH-ENGTVIRSEARADDLYGALDVAYGKLLERLRRARDRRKDHRRGRDRSHQGK 112

Query: 212 GPN-RLKFSEVILPLPSED------EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVF 54
           G + R   ++  LP P +D      E  E   T + D  E     V+R K     P++V 
Sbjct: 113 GASLRTMPADQELPAPLQDLPPEPAEPAETPQTAETDLAEAGSPVVIREKKHPAKPMSVD 172

Query: 53  EAIDQLEMVDHDFYAF 6
           +A+  +E+V HDF+ F
Sbjct: 173 DALYHMELVGHDFFLF 188

[225][TOP]
>UniRef100_B2GAI6 Ribosomal subunit interface protein n=3 Tax=Lactobacillus fermentum
           RepID=B2GAI6_LACF3
          Length = 181

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 3/183 (1%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVG---RVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 372
           +K  I+G N+E++DA++ +V  ++    R ++ +      V++++ +          RT 
Sbjct: 2   LKFNIRGENVEVTDAIRDYVVKRISKLERFLEPNVEANAHVNLKVYSN---------RTY 52

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 192
           + EVT+    +  +RAEE +   YGS+DLV+  ++R++RK K K     R  KG   L+F
Sbjct: 53  KVEVTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGYKNLEF 110

Query: 191 SEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFY 12
            +     PSE+ E    +            ++VRTK   + P+   EA+ Q++M+ HDF+
Sbjct: 111 VDT----PSEEVEASDSL------------KIVRTKQIPLKPMDSEEAVLQMDMLGHDFF 154

Query: 11  AFR 3
            ++
Sbjct: 155 VYQ 157

[226][TOP]
>UniRef100_C0FKQ0 Putative uncharacterized protein n=1 Tax=Clostridium sp. M62/1
           RepID=C0FKQ0_9CLOT
          Length = 175

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 55/179 (30%), Positives = 91/179 (50%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           ++  I GRN++++  +++ V +K+G+ ++++     E  + LS     +        + E
Sbjct: 1   MRYTITGRNIDVTPGLREAVIEKIGK-LERYFNQDTEAIITLSVTKDRQ--------KIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K H ++RAEE +   Y SIDLV  II+R+L+K K K  D     K    + FSE+
Sbjct: 52  VTIPVKGH-IIRAEEQSTDMYVSIDLVEEIIERQLKKYKRKLID-----KKQAPVDFSEL 105

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            +   SE  +DEI+I               + K F M P+   EA  Q+E++ H FY F
Sbjct: 106 FVQEESE-PDDEIKIE--------------KVKKFAMKPMDPEEACVQMELLGHSFYVF 149

[227][TOP]
>UniRef100_B6G1P8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
           13275 RepID=B6G1P8_9CLOT
          Length = 190

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 47/182 (25%), Positives = 94/182 (51%)
 Frame = -1

Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR 369
           S +++ + G++++L+D +K + EDK+ ++     YL  + +V+++   G         ++
Sbjct: 7   SFMRVTVTGKHVKLTDGIKGYTEDKLKKL---GKYLDEDTEVKVTVSAG------KNRQK 57

Query: 368 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFS 189
            EV +       +R EE  +  Y +IDLV   + R++ K K+K       + G   +++ 
Sbjct: 58  VEVMIPNVNGHTIRVEEEQDNLYPAIDLVCDKLSRQIIKYKDK---FKTRVPGNFSIRYE 114

Query: 188 EVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYA 9
            +        EE   E+  + ++ E +IE   R K F++ P+++ EAI Q+ + DHDFY 
Sbjct: 115 GI--------EELAQELDYEVEEPEVVIE---RRKKFNLKPMSIEEAILQMNLTDHDFYM 163

Query: 8   FR 3
           F+
Sbjct: 164 FK 165

[228][TOP]
>UniRef100_B4BN91 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Geobacillus sp. G11MC16 RepID=B4BN91_9BACI
          Length = 182

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 54/175 (30%), Positives = 100/175 (57%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           I+G N+E++ A++++VE K+G+ ++++      V V ++ +   + G+G    + EVT+ 
Sbjct: 5   IRGENIEVTPALREYVEKKIGK-LERYFDDTDHVHVNVNLKVYND-GQG----KIEVTIP 58

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
              H ++RAEE  +  Y +IDLV+  ++R++RK K K      + K  +R K  ++  P+
Sbjct: 59  IP-HLLLRAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVKLAAPV 112

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           P+     E       +DEE    E+VRTK+F + P+   EAI Q+ ++ H+F+ F
Sbjct: 113 PNGAAAAE-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157

[229][TOP]
>UniRef100_Q00W70 Chloroplast-specific ribosomal protein (ISS) n=1 Tax=Ostreococcus
           tauri RepID=Q00W70_OSTTA
          Length = 184

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
 Frame = -1

Query: 548 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQK-HSYLVREVDVRLSTRGGGEFGRGPRTR 372
           + VK+++QG ++E++ A+ ++V  K+GR      S  +REVDVR S RGG E  +G    
Sbjct: 48  TDVKMLVQGLHLEITPAIDEYVRSKIGRACSHVDSRDIREVDVRCSARGG-EGSKGGVEH 106

Query: 371 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RH 219
           + EVT+   R   + A+   E  Y +ID  + I+ R +RK KEK    G RH
Sbjct: 107 KTEVTVLMTRGPTLHADGVGENLYATIDQCADIVTRSIRKHKEKHGGKGARH 158

[230][TOP]
>UniRef100_Q5HHR8 Uncharacterized protein SACOL0815 n=1 Tax=Staphylococcus aureus
           subsp. aureus COL RepID=Y815_STAAC
          Length = 190

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 46/180 (25%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
           ++  I G N+ ++DA++ ++E+K+G++ +  + +   V  V++ T             + 
Sbjct: 2   IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNS-------ATKI 54

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           EVT+  K +  +RAEE  +  Y  IDL+++ ++R++RK K +     R  +G   +  +E
Sbjct: 55  EVTIPLK-NVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD-RGDQEVFVAE 112

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           +        E  E ++     D+ E+  E++R+K F + P+   EA+ Q+ ++ HDF+ F
Sbjct: 113 L-------QEMQETQVDNDAYDDNEI--EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVF 163

[231][TOP]
>UniRef100_Q2YSH7 Uncharacterized protein SAB0704 n=35 Tax=Staphylococcus aureus
           RepID=Y704_STAAB
          Length = 190

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 46/180 (25%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
           ++  I G N+ ++DA++ ++E+K+G++ +  + +   V  V++ T             + 
Sbjct: 2   IRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNS-------ATKI 54

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           EVT+  K +  +RAEE  +  Y  IDL+++ ++R++RK K +     R  +G   +  +E
Sbjct: 55  EVTIPLK-NVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD-RGDQEVFVAE 112

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           +        E  E ++     D+ E+  E++R+K F + P+   EA+ Q+ ++ HDF+ F
Sbjct: 113 L-------QEMQETQVDNDAYDDNEI--EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVF 163

[232][TOP]
>UniRef100_Q5HQX7 Uncharacterized protein SERP0419 n=3 Tax=Staphylococcus epidermidis
           RepID=Y419_STAEQ
          Length = 189

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 48/180 (26%), Positives = 96/180 (53%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
           ++  I G N+ ++DA++ ++E+KVG++ +  + +   V  VR+ T           T + 
Sbjct: 2   IRFEIHGDNLTITDAIRNYIEEKVGKLERYFNNVPNAVAHVRVKTYSNS-------TTKI 54

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           EVT+  K    +RAEE  +  Y  IDL+++ ++R++RK K +   + +H    ++  F  
Sbjct: 55  EVTIPLK-DVTLRAEERHDDLYAGIDLITNKLERQVRKYKTRV--NRKHRDRGDQDIFVA 111

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            +    + +  D+IE       E ++  E++R+K F + P+   EA+ Q+ ++ HDF+ F
Sbjct: 112 EVQESTTNNHADDIE------SENDI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIF 163

[233][TOP]
>UniRef100_Q8ENI5 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis
           RepID=Q8ENI5_OCEIH
          Length = 185

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 51/179 (28%), Positives = 94/179 (52%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E++ A+K++VE K+ + ++++       DV ++     +       +R E
Sbjct: 1   MKFNIRGENIEVTGAIKEYVEKKISK-LERYFDSAPNTDVHVNLSVYND------EQRIE 53

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+    + ++R E      Y ++DLV   ++R++RK K K     R    P    F+E+
Sbjct: 54  VTI-PMTNLLLRGEVQHIDLYAAVDLVVDKLERQIRKHKTKINRKFRQNGSPKHA-FAEM 111

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                    E E  +   ++DE +L  E+VRTK F++ P+   EAI Q++M+ H+F+ F
Sbjct: 112 ---------EKEARLAEDEEDENQL--EIVRTKRFNLKPMDSEEAILQMDMLGHEFFVF 159

[234][TOP]
>UniRef100_A4VTG7 Ribosome-associated protein Y (PSrp-1) n=6 Tax=Streptococcus suis
           RepID=A4VTG7_STRSY
          Length = 192

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 51/180 (28%), Positives = 97/180 (53%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I+G N+E+++A++ +VE+KV + I+K+    +E++ +++ +         R +R +
Sbjct: 14  IKFSIRGENLEVTEALRTYVEEKVAK-IEKYFNEEQELNAKVNLKVY-------RDKRAK 65

Query: 362 VTLYTKRHGV-VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           V +      V +RAE+ ++  YGSIDLV   I+R++R+ K K     R      ++   E
Sbjct: 66  VEVTIPVGAVTLRAEDISQEMYGSIDLVVDKIERQIRRNKTKIERKHRQKVATGQVFTDE 125

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           ++     E   +E++              VVRTK  D+ P+ + EA+ QLE++ HDF+ +
Sbjct: 126 LV-----EQTGEEVK--------------VVRTKQVDLKPMDMEEAVLQLELLGHDFFIY 166

[235][TOP]
>UniRef100_A4ISU0 Ribosomal subunit interface protein n=1 Tax=Geobacillus
           thermodenitrificans NG80-2 RepID=A4ISU0_GEOTN
          Length = 182

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 54/175 (30%), Positives = 100/175 (57%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           I+G N+E++ A++++VE K+G+ ++++      V V ++ +   + G+G    + EVT+ 
Sbjct: 5   IRGENIEVTPALREYVEKKIGK-LERYFDDTDHVHVNVNLKVYND-GQG----KIEVTIP 58

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
              H ++RAEE  +  Y +IDLV+  ++R++RK K K      + K  +R K  ++  P+
Sbjct: 59  IP-HLLLRAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVKLAAPV 112

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           P+     E       +DEE    E+VRTK+F + P+   EAI Q+ ++ H+F+ F
Sbjct: 113 PNGAAAVE-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIF 157

[236][TOP]
>UniRef100_Q8XIE9 30S ribosomal protein S30AE family n=1 Tax=Clostridium perfringens
           RepID=Q8XIE9_CLOPE
          Length = 179

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K+ +  +N+EL++A+K  VE K+ + + K+     E    LS     +           
Sbjct: 1   MKVTVHAKNIELTNALKDCVEKKISK-LSKYFEPGVEAKATLSVEKNKQI---------- 49

Query: 362 VTLYTKRHGVV-RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           V +    +G++ R EE  +  Y SIDLV   I+R++RK K + +   R+    + L+F+ 
Sbjct: 50  VEIMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                          I P +D +EE   ++V+TK FD+ P+   EA+ Q+E++ HDF+ F
Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150

Query: 5   R 3
           +
Sbjct: 151 Q 151

[237][TOP]
>UniRef100_B8FYZ1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
           Tax=Desulfitobacterium hafniense RepID=B8FYZ1_DESHD
          Length = 175

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 56/179 (31%), Positives = 89/179 (49%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           + + ++G+ ME++DA+K++V  +VG+ ++K+S    +V V L    G          R E
Sbjct: 1   MNISVRGKQMEVTDALKEYVLKRVGK-LEKYSDEFMDVKVTLLVEEG--------RHRVE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT   +   ++R EE +   Y SIDLV   ++R++ K + +     R       LK  E+
Sbjct: 52  VTAPLQGM-ILRGEEESGDMYASIDLVVEKLERQIDKYRTRINKRMR----TKVLKDHEI 106

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
             P   ED+                 EEVVR K F   P++V EAI Q+ +V H+FYAF
Sbjct: 107 EHPALYEDDS----------------EEVVRHKKFGTKPMSVEEAIMQMNLVGHNFYAF 149

[238][TOP]
>UniRef100_Q1GB46 Ribosomal protein S30EA n=2 Tax=Lactobacillus delbrueckii
           RepID=Q1GB46_LACDA
          Length = 185

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 50/180 (27%), Positives = 100/180 (55%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  ++G N+E+++A++ +VE ++ + ++K+  L ++V   ++ +   +      + + E
Sbjct: 2   LKYNVRGENIEVTEALRDYVEKRLTK-LEKYFDLSQDVIAHVNLKVYRD-----HSAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+    + V+RAEE  +  Y SID VS  ++R++RK K +     R  KG       E 
Sbjct: 56  VTIPLP-YLVLRAEETTDDMYRSIDFVSEKLERQIRKYKTRVNRKSRE-KG-----VEEF 108

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
            +P  +  EE+++E  P        + ++VR K  ++ P+   EAI Q++M++HDF+ F+
Sbjct: 109 FIPEDAPVEEEKVEKAP--------MFKIVRNKRVNLKPMDPEEAILQMDMLEHDFFVFQ 160

[239][TOP]
>UniRef100_C4GCR0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles
           DSM 14600 RepID=C4GCR0_9FIRM
          Length = 176

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 59/179 (32%), Positives = 88/179 (49%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  I GRN+EL+D +K  VED     + K     RE  +   T    + G+     R E
Sbjct: 1   MKTTITGRNIELTDGLKSAVED----ALSKLDRYFREDTLAHVTMSVDKAGQ-----RVE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           +T+  K  G+VR E+  +  Y SID  S  I+ +L K + K  D  R  KG         
Sbjct: 52  LTIPVKG-GIVRCEKTTDDMYVSIDAASEGIEDQLTKYRHKLVD--RAHKG--------A 100

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           +L    E+  DE       D+EEE+  ++VRTK FD+ P+   +A  Q+E++ H F+ F
Sbjct: 101 VLNAAFEEGFDE-------DEEEEI--KIVRTKKFDLKPMYAEDACAQMELLGHSFFVF 150

[240][TOP]
>UniRef100_C6VLR5 Ribosomal protein S30EA n=3 Tax=Lactobacillus plantarum
           RepID=C6VLR5_LACPJ
          Length = 188

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVD----VRLSTRGGGEFGRGPRTRRCE 363
           I+G N+E++ A++ +V+ +VG++     Y    VD    V L            +T + E
Sbjct: 6   IRGENIEVTQAIRDYVQKRVGKL---QKYFDNNVDSIAHVNLKVHPD-------KTAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+    + V+RAEE +   Y S+DLV+  ++R++RK K K     R  KG   + F+  
Sbjct: 56  VTIPLP-YLVLRAEETSPDMYASVDLVTDKLERQIRKYKTKVNRKSRE-KGYKAIDFAAT 113

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                     DE       D +++L  +VVRTK   + P+   EAI Q++M+ HDF+ +
Sbjct: 114 ----------DETVAAADNDQDDKL--DVVRTKRVALKPMDNEEAILQMDMLGHDFFIY 160

[241][TOP]
>UniRef100_C2EM10 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
           ultunensis DSM 16047 RepID=C2EM10_9LACO
          Length = 181

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 50/179 (27%), Positives = 95/179 (53%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K  ++G N+E++DA++ +VE ++ + ++K+  L ++V   ++ R   +      + + E
Sbjct: 2   LKYNVRGENIEVTDALRSYVEKRLNK-LEKYFELSQDVIAHVNLRVYRD-----HSAKVE 55

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+    + V+RAEE+ +  Y SID VS  ++R++RK K +     R  KG       + 
Sbjct: 56  VTIPLP-YLVLRAEENTDDMYRSIDFVSEKLERQIRKYKTRVNRKSRE-KG-----MQDF 108

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            +  P E+E+   E             ++VR K   + P+   EAI Q++M++HDF+ F
Sbjct: 109 FVEQPEEEEKKPSEF------------DIVRNKRVSLKPMDPEEAILQMDMLEHDFFVF 155

[242][TOP]
>UniRef100_C0X601 Ribosome-associated inhibitor protein Y n=22 Tax=Enterococcus
           faecalis RepID=C0X601_ENTFA
          Length = 189

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 53/175 (30%), Positives = 93/175 (53%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           ++G N+E+++A++ +VE KVG+ ++++     E  V ++ +   E     +T + EVT+ 
Sbjct: 12  VRGENIEVTEAIRDYVEKKVGK-LERYFSDSPEATVHVNLKVYTE-----KTAKVEVTIP 65

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
              + V+RAEE +   Y SIDLV   ++R++RK K K     R   G N  K +  ++  
Sbjct: 66  LP-YLVLRAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSRE-TGRNNTKAAVFLV-- 121

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                 +E E TP + D       +VRTK   + P+   EA+ Q+ M+ H+F+ F
Sbjct: 122 -----GEETEETPSELD-------IVRTKRLSLKPMDSEEAVLQMNMLGHNFFIF 164

[243][TOP]
>UniRef100_C0VZW2 Ribosome-associated inhibitor protein Y n=1 Tax=Actinomyces
           coleocanis DSM 15436 RepID=C0VZW2_9ACTO
          Length = 220

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 18/198 (9%)
 Frame = -1

Query: 545 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---- 378
           ++ + I GRN E+    + +VE+KV +V Q +    R +DV L+        R PR    
Sbjct: 4   TMDITIVGRNAEIHPNFRAYVEEKVAKVTQLYPRAQR-IDVELTHE------RNPRQAET 56

Query: 377 TRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 198
             R E+T++ K   ++RAE  +   + ++D+    +  +LR+ +++  DH R    P  +
Sbjct: 57  AERIELTVFGKGP-IIRAEASSSDRHAAVDIAVGKLFERLRRARDRAKDHRRRYDTPIAV 115

Query: 197 KFSEVILPLPSEDEEDEIEITPQKDDEE-------ELIEE-------VVRTKYFDMPPLT 60
               ++   P E E +E  +T ++           E+ EE       +VR K  +  P+T
Sbjct: 116 DLGGIV---PDEVEVEEAPVTAEESLRSAADLKPGEVREEQFGDSPVIVRQKLHEAEPMT 172

Query: 59  VFEAIDQLEMVDHDFYAF 6
           V +A+ Q+E+V H F+ F
Sbjct: 173 VDQALYQMELVGHPFFLF 190

[244][TOP]
>UniRef100_B9CQX8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus capitis
           SK14 RepID=B9CQX8_STACP
          Length = 191

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRC 366
           ++  I G N+ ++DA++ ++EDK+G++ +  + +   V  V++ T             + 
Sbjct: 2   IRFEIHGDNLTITDAIRNYIEDKIGKLERYFNNVPNAVAHVKVKTYSNS-------ATKI 54

Query: 365 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           EVT+  K    +RAEE  +  Y  IDL++  ++R++RK K +     R  +G   +  +E
Sbjct: 55  EVTIPLK-DVTLRAEERHDDLYAGIDLITGKLERQVRKYKTRVNRKHRD-RGDQEVFVAE 112

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
           V      E    E+    +   + E+  E++R+K F + P+   EA+ Q+ ++ HDF+ F
Sbjct: 113 V-----QEASPGEVSGAEESVSDSEI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIF 165

[245][TOP]
>UniRef100_Q0SR10 Ribosomal subunit interface protein n=1 Tax=Clostridium perfringens
           SM101 RepID=Q0SR10_CLOPS
          Length = 179

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K+ +  +N+EL++A+K  VE K+ + + K+     E    LS     +           
Sbjct: 1   MKVTVHAKNIELTNALKDCVEKKISK-LSKYFEPGVEAKATLSVEKNKQI---------- 49

Query: 362 VTLYTKRHGVV-RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 186
           V +    +G++ R EE  +  Y SIDLV   I+R++RK K + +   R+    + L+F+ 
Sbjct: 50  VEVMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH 105

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                          I P +D +EE   ++V+TK FD+ P+   EA+ Q+E++ HDF+ F
Sbjct: 106 ---------------IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVF 150

Query: 5   R 3
           +
Sbjct: 151 Q 151

[246][TOP]
>UniRef100_C6LIX7 Ribosomal subunit interface protein n=1 Tax=Bryantella
           formatexigens DSM 14469 RepID=C6LIX7_9FIRM
          Length = 176

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 51/180 (28%), Positives = 98/180 (54%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           ++  I G+N+E+++ ++  V DK+G+ ++++     E+ V +S             ++ E
Sbjct: 1   MRFTISGKNIEITEGLRTTVMDKLGK-LERYFTPDTEIIVTMSVE--------KERQKIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN-RLKFSE 186
           VT+  K + ++R+E+ +   Y SIDLV  +I+R+LRK K K     +H +G N R +F E
Sbjct: 52  VTIPVKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKLI--AKHQEGSNFRREFIE 108

Query: 185 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                    +E+ +E        EE+   ++RTK+F + P+   +A  Q+E++ H+F+ F
Sbjct: 109 ---------KEETVE-------PEEV--NIIRTKHFGIKPMYPEDACIQMELLGHNFFVF 150

[247][TOP]
>UniRef100_C6JE61 Putative uncharacterized protein n=1 Tax=Ruminococcus sp.
           5_1_39BFAA RepID=C6JE61_9FIRM
          Length = 175

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 51/179 (28%), Positives = 91/179 (50%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K II G+N+ +++ +K  V+DK+ + ++++     EV V LS             ++ E
Sbjct: 1   MKFIISGKNITVTEGLKTAVQDKLSK-LERYFTPDTEVVVTLSVE--------KERQKIE 51

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
           VT+  K + ++R+E+ +   Y SIDLV  +I+R+LRK K K  D     K      F + 
Sbjct: 52  VTIPVKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVD-----KQQAAANFQKA 105

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
            L                KD +E+   +++RTK F + P+   +A  Q+E++ H+F+ F
Sbjct: 106 YL---------------DKDYDEDEEVKIIRTKKFGIKPMYPEDACVQMELLGHNFFVF 149

[248][TOP]
>UniRef100_B2TK14 Ribosome-associated protein Y n=3 Tax=Clostridium botulinum
           RepID=B2TK14_CLOBB
          Length = 177

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 52/180 (28%), Positives = 94/180 (52%)
 Frame = -1

Query: 542 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 363
           +K+I+  +N+EL++A+++ VE K+ + + K+     E    LS +         R R+  
Sbjct: 1   MKVIVIAKNIELTNALREMVEKKISK-LGKYFNSDIEAKATLSVQ---------RNRQIV 50

Query: 362 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEV 183
             +      V+R EE  E  Y +IDLV+  ++R++RK K K +      K    LKF E+
Sbjct: 51  EVMIPFNGVVLRGEEANEDMYRAIDLVAEKLERQIRKQKTKLS-----RKKSGSLKFGEI 105

Query: 182 ILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFR 3
           +            +++P   DEEE   ++V+ K F + P+ + EAI Q+E+V H+F+ ++
Sbjct: 106 V------------DLSPVAVDEEEA--KLVKRKRFGVKPMDIDEAILQMELVGHNFFVYQ 151

[249][TOP]
>UniRef100_C5NVZ2 Ribosome-associated factor Y n=1 Tax=Gemella haemolysans ATCC 10379
           RepID=C5NVZ2_9BACL
          Length = 181

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 51/175 (29%), Positives = 94/175 (53%)
 Frame = -1

Query: 530 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 351
           ++G N+E++ A++++VE+KV + ++K+     E +V  + +           ++ E+T+ 
Sbjct: 6   VRGENLEITQAIREYVENKVSK-LEKYFADSLEANVYANAKVYKN-----NKKKIEITV- 58

Query: 350 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPL 171
             R   +RAEE  E  Y ++DLV   ++R++RK K K    GR  KG     F+E     
Sbjct: 59  PLRGVTLRAEETNEDLYAAVDLVVDKLERQMRKHKTKINRKGRE-KG-----FAE----- 107

Query: 170 PSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 6
                  EI +T + ++ EE   ++ + K   + P+T  EA+ Q+E++ HDF+AF
Sbjct: 108 -------EIILTSELEEAEETTLDLGKVKQLKVEPMTREEAVFQMELLGHDFFAF 155

[250][TOP]
>UniRef100_C4E796 SSU ribosomal protein S30P; sigma 54 modulation protein n=1
           Tax=Streptosporangium roseum DSM 43021
           RepID=C4E796_STRRS
          Length = 218

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 17/195 (8%)
 Frame = -1

Query: 536 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT 357
           +I++GR+  +SD  + HV  K+ R I++  + +  VDV ++         G R  R E+T
Sbjct: 3   IIVKGRHTGVSDRFRDHVTTKLAR-IERLDHKLISVDVEVTKESNPRI-IGQR-ERVELT 59

Query: 356 LYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK-ETDHGRHMKGPNRLKFS--- 189
           +++ R   VRAE  A+  + ++D+    ++ +LR++ ++ +  HG H   P+  + +   
Sbjct: 60  IHS-RGPAVRAEATADDRFAALDIALGKLEGRLRRLADRRKIHHGNHCP-PSLAELAATA 117

Query: 188 -----EVILPLPSEDEEDEIEITPQKDDEEELIEE--------VVRTKYFDMPPLTVFEA 48
                E + P P E+ E + +      +++ ++          VVR K     P+T+ +A
Sbjct: 118 LAETLEAVPPRPREEPEVQSDFEADLSEDKTIVPIHMDGDGPLVVREKAHQADPMTIDQA 177

Query: 47  IDQLEMVDHDFYAFR 3
           + ++E+V HDFY FR
Sbjct: 178 LLEMELVGHDFYLFR 192