BB931966 ( RCC03844 )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BB931966  RCC03844
         (187 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q2HT28 Transcription Factor IIF, Rap30/Rap74, interact...    67   5e-10
UniRef100_Q2HT32 Transcription Factor IIF, Rap30/Rap74, interact...    67   8e-10
UniRef100_Q9SU25 Transcription initiation factor IIF subunit alp...    64   5e-09
UniRef100_B9IH94 Predicted protein (Fragment) n=1 Tax=Populus tr...    62   2e-08
UniRef100_B9HCF8 Predicted protein n=1 Tax=Populus trichocarpa R...    62   2e-08
UniRef100_B9SUD1 Tfiif-alpha, putative n=1 Tax=Ricinus communis ...    62   3e-08
UniRef100_UPI0001985F1F PREDICTED: hypothetical protein, partial...    61   3e-08
UniRef100_A7R6U3 Chromosome undetermined scaffold_1426, whole ge...    61   3e-08
UniRef100_A5BCP5 Putative uncharacterized protein n=1 Tax=Vitis ...    61   3e-08
UniRef100_B9S068 Tfiif-alpha, putative n=1 Tax=Ricinus communis ...    59   2e-07
UniRef100_A9RBE5 Predicted protein (Fragment) n=1 Tax=Physcomitr...    58   4e-07
UniRef100_Q8LMN8 Mutant TFIIF-alpha, putative, expressed n=1 Tax...    54   7e-06
UniRef100_Q53QT1 Os10g0188100 protein n=1 Tax=Oryza sativa Japon...    54   7e-06
UniRef100_Q53QT0 Mutant TFIIF-alpha, putative, expressed n=1 Tax...    54   7e-06
UniRef100_C6JRY0 Putative uncharacterized protein Sb0013s009080 ...    54   7e-06
UniRef100_C0PBP2 Putative uncharacterized protein n=1 Tax=Zea ma...    54   7e-06
UniRef100_B9G7U1 Putative uncharacterized protein n=1 Tax=Oryza ...    54   7e-06
UniRef100_B8A2T7 Putative uncharacterized protein n=1 Tax=Zea ma...    54   7e-06
UniRef100_B6T7E5 Transcription initiation factor IIF, alpha subu...    54   7e-06
UniRef100_A2Z5M1 Putative uncharacterized protein n=1 Tax=Oryza ...    54   7e-06
graphical overview:
alignment
UniRef100_Q2HT28 UniRef100_Q2HT28 UniRef100_Q2HT32 UniRef100_Q2HT32 UniRef100_Q9SU25 UniRef100_Q9SU25 UniRef100_B9IH94 UniRef100_B9IH94 UniRef100_B9HCF8 UniRef100_B9HCF8 UniRef100_B9SUD1 UniRef100_B9SUD1 UniRef100_UPI0001985F1F UniRef100_UPI0001985F1F UniRef100_A7R6U3 UniRef100_A7R6U3 UniRef100_A5BCP5 UniRef100_A5BCP5 UniRef100_B9S068 UniRef100_B9S068 UniRef100_A9RBE5 UniRef100_A9RBE5 UniRef100_Q8LMN8 UniRef100_Q8LMN8 UniRef100_Q53QT1 UniRef100_Q53QT1 UniRef100_Q53QT0 UniRef100_Q53QT0 UniRef100_C6JRY0 UniRef100_C6JRY0 UniRef100_C0PBP2 UniRef100_C0PBP2 UniRef100_B9G7U1 UniRef100_B9G7U1 UniRef100_B8A2T7 UniRef100_B8A2T7 UniRef100_B6T7E5 UniRef100_B6T7E5