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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
virus China/Mar2007 RepID=A8W7G1_9VIRU
Length = 723
Score = 295 bits (755), Expect = 1e-78
Identities = 139/148 (93%), Positives = 143/148 (96%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
LFTRNHISKR G LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSN
Sbjct: 311 LFTRNHISKRSGTLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNH 370
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
YI+++AR YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD
Sbjct: 371 YIDRLARPYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 430
Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPD 444
EHKLY RMDNLL+FLHTWYNNMTFLLPD
Sbjct: 431 EHKLYSRMDNLLYFLHTWYNNMTFLLPD 458
[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
partitivirus 1-W8 RepID=Q50LH7_9VIRU
Length = 709
Score = 237 bits (605), Expect = 3e-61
Identities = 110/152 (72%), Positives = 126/152 (82%), Gaps = 4/152 (2%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKP----SCCIMYGLETIR 168
LFTRNHIS RDG LK RPVYAVDD FI+ ELM++FPL + AR P CIMY ETIR
Sbjct: 296 LFTRNHISDRDGFLKQRPVYAVDDFFILCELMISFPLHVMARYPINGIKSCIMYSFETIR 355
Query: 169 GSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY 348
GSNRY++ IARD+ +FF++DWSS+DQR+PRVITDI++TDFLR LIVINHGYQPTYEYP Y
Sbjct: 356 GSNRYLDSIARDFISFFTIDWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQPTYEYPAY 415
Query: 349 PDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPD 444
PDL EH LY RM+NLLHFLHTWYNNM F+ D
Sbjct: 416 PDLSEHDLYKRMNNLLHFLHTWYNNMVFVTAD 447
[3][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-1 RepID=Q6BE43_9VIRU
Length = 706
Score = 224 bits (570), Expect = 3e-57
Identities = 100/148 (67%), Positives = 120/148 (81%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
LFTRNHIS RDG LK RPVYAVDD+F+I+E+MLTFPL + AR P CCIMYGLETIRGSN
Sbjct: 296 LFTRNHISDRDGNLKQRPVYAVDDLFLILEVMLTFPLLVMARLPECCIMYGLETIRGSNH 355
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
+I+ A+ + ++F++DWS YDQRLPR ITD+YYTDFL SLI+IN GYQPT +Y YPDL
Sbjct: 356 WIDSTAKRFRSYFTIDWSQYDQRLPRCITDLYYTDFLESLIIINFGYQPTADYADYPDLT 415
Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPD 444
++ RM NLLHFLHTWYNNM ++ D
Sbjct: 416 PDMMFTRMTNLLHFLHTWYNNMVYVTAD 443
[4][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
RepID=Q5GHF1_9VIRU
Length = 706
Score = 223 bits (569), Expect = 4e-57
Identities = 99/148 (66%), Positives = 123/148 (83%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
LFTRNHIS RDG LK RPVYA+DD+FI +E M+TFPL + ARK CCIMYG ETIRGSNR
Sbjct: 295 LFTRNHISDRDGNLKQRPVYAMDDLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNR 354
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
I++IA + +FF++DWS +DQRLPRVITDI+++DFL +IVI+HGYQPTY+YP+YPDL
Sbjct: 355 QIDKIASSFRSFFTIDWSGFDQRLPRVITDIFWSDFLERMIVISHGYQPTYDYPSYPDLT 414
Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPD 444
K++ RMDN+L FLHTWYNN+ F+ D
Sbjct: 415 PDKMFQRMDNILFFLHTWYNNLVFVTAD 442
[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=D0EIN9_9VIRU
Length = 502
Score = 218 bits (554), Expect = 2e-55
Identities = 95/148 (64%), Positives = 122/148 (82%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
LFTRNHIS RDG LK RPVYA+DD+FI +E +TFPL + ARK CCIMYG ETIRGSNR
Sbjct: 295 LFTRNHISDRDGNLKQRPVYAMDDLFIRLESKITFPLHVMARKIECCIMYGYETIRGSNR 354
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
I+++A +Y ++F++DWS +DQRLPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL
Sbjct: 355 QIDKLASNYKSYFTIDWSGFDQRLPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLT 414
Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPD 444
K++ RM N+L FLHTWYNN+ ++ D
Sbjct: 415 PDKMFQRMSNILTFLHTWYNNLVYVTAD 442
[6][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
RepID=Q9YX75_9VIRU
Length = 673
Score = 206 bits (524), Expect = 6e-52
Identities = 92/148 (62%), Positives = 117/148 (79%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
LFTRNHIS RDG LK RPVYAVDD+F+ IE MLTFP + ARKP CCIMYGLETIRGSN+
Sbjct: 292 LFTRNHISDRDGILKQRPVYAVDDLFLTIESMLTFPAHVIARKPECCIMYGLETIRGSNQ 351
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
+++IA DY +FF++DWS +DQRLP VI +++T+++ L+V+NHGY PTYEYP+YPDL
Sbjct: 352 ILDKIASDYKSFFTIDWSGFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYEYPSYPDLT 411
Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPD 444
+ + R+ NL+ FL TWY NM F+ D
Sbjct: 412 TNDMVSRLTNLITFLATWYFNMVFVTAD 439
[7][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=B2L075_9VIRU
Length = 185
Score = 184 bits (466), Expect = 3e-45
Identities = 78/125 (62%), Positives = 103/125 (82%)
Frame = +1
Query: 70 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 249
D+FI +E M+TFPL + ARK CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1 DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60
Query: 250 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 429
LPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWYNN+
Sbjct: 61 LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120
Query: 430 FLLPD 444
++ D
Sbjct: 121 YVTAD 125
[8][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
virus 717 RepID=Q9Q9X2_9VIRU
Length = 730
Score = 174 bits (441), Expect = 3e-42
Identities = 82/148 (55%), Positives = 108/148 (72%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
+FTRNHISKRDG LKVRPVYAVD++F+ +E ML FP T+QARKP CCIMYGLETIRGSN
Sbjct: 323 MFTRNHISKRDGTLKVRPVYAVDELFLDLECMLAFPATVQARKPECCIMYGLETIRGSNI 382
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
++ +A+ + +F ++DWS YDQRLP I ++ +L SL++I+HGY PT EY ++
Sbjct: 383 KLDSLAQGFISFATIDWSGYDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSEYED-TSMN 441
Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPD 444
++ R NL++F TWY NM FL D
Sbjct: 442 ISDMFTRFFNLINFTATWYFNMVFLSAD 469
[9][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
hypoxylon virus RepID=Q85055_AHV
Length = 665
Score = 119 bits (299), Expect = 8e-26
Identities = 68/171 (39%), Positives = 94/171 (54%), Gaps = 23/171 (13%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
L R+HISKRD LKVRPVY I+I IE ML +PL QARK CCIMYGLETIRG
Sbjct: 257 LLVRSHISKRDN-LKVRPVYNAPMIYIRIECMLFYPLLAQARKRDCCIMYGLETIRGGMN 315
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQP----------- 327
+E+I+ +++F +DWS +D P I++ ++ +L + I+I+HGY
Sbjct: 316 ELERISNAFNSFLLIDWSRFDHLAPFTISNFFFKKWLPTKILIDHGYAQISNYHDHVHSF 375
Query: 328 ------------TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPD 444
+ EY T P+ ++ NL+ FL WY +M F+ PD
Sbjct: 376 SAQAQSHGIPMISKEYQTPPEAT--VFAKKVLNLISFLERWYRDMVFVTPD 424
[10][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6X9T6_9VIRU
Length = 663
Score = 114 bits (286), Expect = 3e-24
Identities = 63/169 (37%), Positives = 93/169 (55%), Gaps = 21/169 (12%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGLETIRG
Sbjct: 261 LLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMM 319
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY---- 348
IE +A +S F +DWS +DQ +P + D++Y D++ +LI+++ GY + Y +
Sbjct: 320 EIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSF 379
Query: 349 ------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPD 444
+L+E ++++NLL F++TW+ M ++ PD
Sbjct: 380 AAQARKLGVHGDSNLNEAPPEAAVFANKVENLLKFINTWFKEMVYITPD 428
[11][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
1 RepID=Q5DM90_9VIRU
Length = 663
Score = 114 bits (286), Expect = 3e-24
Identities = 63/169 (37%), Positives = 93/169 (55%), Gaps = 21/169 (12%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGLETIRG
Sbjct: 261 LLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMM 319
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY---- 348
IE +A +S F +DWS +DQ +P + D++Y D++ +LI+++ GY + Y +
Sbjct: 320 EIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSF 379
Query: 349 ------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPD 444
+L+E ++++NLL F++TW+ M ++ PD
Sbjct: 380 AAQARKLGVHGNSNLNEAPPETAIFANKVENLLKFINTWFKEMVYITPD 428
[12][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6EM35_9VIRU
Length = 663
Score = 113 bits (283), Expect = 6e-24
Identities = 63/169 (37%), Positives = 92/169 (54%), Gaps = 21/169 (12%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYG ETIRG
Sbjct: 261 LLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGFETIRGGMM 319
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY---- 348
IE +A +S F +DWS +DQ +P + D++Y D++ +LI+I+ GY + Y +
Sbjct: 320 EIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHNYNDHVHSF 379
Query: 349 ------------PDLDE-----HKLYHRMDNLLHFLHTWYNNMTFLLPD 444
+L+E ++++NLL F++TW+ M ++ PD
Sbjct: 380 AAQARKLGVHGNSNLNEAPPEASVFANKVENLLKFINTWFKEMVYITPD 428
[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
annosum P-type partitivirus RepID=Q8QY51_9VIRU
Length = 734
Score = 87.0 bits (214), Expect = 6e-16
Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 31/179 (17%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
++ R+ ISK LKVRPVY +F+++E MLT L Q RKP CI++ ETIRG
Sbjct: 284 MYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRGGMH 342
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT--YEYPTYPD 354
+ +I+ +++ F D+S +DQ P I ++ F+ +I ++ GYQ + Y Y
Sbjct: 343 ELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQYA- 401
Query: 355 LDEHKLYHRMD-----------------------------NLLHFLHTWYNNMTFLLPD 444
D K Y +D N+L F+ WY M F+ PD
Sbjct: 402 YDFEKKYDNLDKSEPKFQEFAKKSNNLFPKHVVAFSFVIFNILSFIWWWYVFMVFITPD 460
[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
Length = 576
Score = 77.0 bits (188), Expect = 6e-13
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Frame = +1
Query: 4 FTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLETIRGSN 177
F R H+ + D P KVR V+ ++ ELM +PL + AR P +++G ET+ G
Sbjct: 207 FARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYETLTGGW 266
Query: 178 RYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT 345
+ A D YST +LDWS +D+ + + +R + GY PT YP
Sbjct: 267 SRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPTISYPN 326
Query: 346 YPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPD 444
PD + R++NL +++ + +LPD
Sbjct: 327 APDTNP----DRLENLWNWMTDAILTVPLMLPD 355
[15][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
virus RepID=C0STM0_9VIRU
Length = 580
Score = 55.5 bits (132), Expect = 2e-06
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETIRGS- 174
+ T++ I P KVR ++ V + +++E M +PL R + +++G ET+ G
Sbjct: 203 IHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETMLGGW 262
Query: 175 ---NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYP 342
N + + SLDWS +D R L VI D+Y ++S N+GY PT +YP
Sbjct: 263 YKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPTVDYP 322
Query: 343 ---TYPDLDEHKLYHRMDNLLHF 402
T+P H L+ M L F
Sbjct: 323 DSSTHPQ-KLHNLWDWMLTALKF 344
[16][TOP]
>UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus
partitivirus RepID=A2VA07_9VIRU
Length = 132
Score = 54.7 bits (130), Expect = 3e-06
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETIRG 171
L +R+H+ + D P K+R V+ V + +++E M + + + +++G ETIRG
Sbjct: 10 LHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETIRG 69
Query: 172 S-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 330
+ I Q+ ++ S+ S DWS +D + L VI D++ D +S N GY+P+
Sbjct: 70 GWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123
[17][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
virus II RepID=Q7TDZ9_9VIRU
Length = 610
Score = 53.9 bits (128), Expect = 5e-06
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 12/159 (7%)
Frame = +1
Query: 4 FTRNHI-SKRDGPL---KVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLETI 165
F R HI K+ G L KVR V+ + EL+ +PL + + +++G ETI
Sbjct: 242 FARQHIVEKKPGILAQPKVRLVFGAPFTLLTAELIFIWPLQTHLLLMQDFSPMLWGYETI 301
Query: 166 RGS-NRYIEQIARDYST---FFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 333
G R ++ T +LDWS +D+ + +T +R +GY PT+
Sbjct: 302 LGGWYRLRGHLSGKIDTDKLVATLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNGYHPTH 361
Query: 334 EYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPD 444
YP T D DE + R++NL +++ + L+PD
Sbjct: 362 RYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPD 400