[UP]
[1][TOP] >UniRef100_Q2HUT6 SH2 motif; Alcohol dehydrogenase, zinc-containing; Resolvase, RNase H-like fold; Nucleic acid-binding, OB-fold, subgroup n=1 Tax=Medicago truncatula RepID=Q2HUT6_MEDTR Length = 1640 Score = 201 bits (511), Expect = 3e-50 Identities = 100/142 (70%), Positives = 107/142 (75%), Gaps = 23/142 (16%) Frame = -2 Query: 577 PSGVPRPYGGGRGRGRGSYNNSSRGHNSNNERHDGA----TRWGSAATKDRDDNLSNFPG 410 PSGVPRPYGGGRGRGRGSYNN RGH NNER DGA + WGSAATKD+DD+LSNFPG Sbjct: 1503 PSGVPRPYGGGRGRGRGSYNN--RGH--NNERQDGASGWGSGWGSAATKDKDDSLSNFPG 1558 Query: 409 AKVQNSPGREAFPGSWGGTGGWGGGATTGDKSGWGAG-------------------PSDA 287 AKVQNSPGREAFPG WGG GWGGGA+TGDKSGWG G + A Sbjct: 1559 AKVQNSPGREAFPGGWGGGSGWGGGASTGDKSGWGGGANTGDKSGWGGGNGWGGGASTGA 1618 Query: 286 EHGSSGWGTGSKKAADIGWSGN 221 EHG+SGWG+GSKKAADIGWSGN Sbjct: 1619 EHGNSGWGSGSKKAADIGWSGN 1640 [2][TOP] >UniRef100_B9HDT6 Global transcription factor group n=1 Tax=Populus trichocarpa RepID=B9HDT6_POPTR Length = 1648 Score = 133 bits (335), Expect = 9e-30 Identities = 75/128 (58%), Positives = 81/128 (63%), Gaps = 11/128 (8%) Frame = -2 Query: 580 HPSGVPRPYGGGRGRGRGSYNNSSRGHNSNNERHDGA---TRWGSAATKDRDDNLSNFPG 410 H SG PRPY G RGRGRGSYNN G NS NER D RW S TKD D+ +FPG Sbjct: 1493 HQSGAPRPYSG-RGRGRGSYNNGG-GSNSGNERRDSGYDKPRWDSG-TKDGDEGWGSFPG 1549 Query: 409 AKVQNSPGREAFPGSWG-----GTGGWGGGATTGDKSGWGAG-PSDAEHGSSGWGTGSKK 248 AKVQNSPGREAFPG WG G GWGGGA+ GD SGWG G + G+SG GT S K Sbjct: 1550 AKVQNSPGREAFPGGWGAGASSGGNGWGGGASGGDNSGWGHGTDGGTDSGNSGRGTTSSK 1609 Query: 247 --AADIGW 230 +A GW Sbjct: 1610 RDSAQRGW 1617 [3][TOP] >UniRef100_UPI0001983C6D PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001983C6D Length = 1652 Score = 124 bits (311), Expect = 5e-27 Identities = 76/154 (49%), Positives = 93/154 (60%), Gaps = 38/154 (24%) Frame = -2 Query: 577 PSGVPRPYGGGRGRGRGSYNNSSRGHNSNNERHD---GATRWGSAATKDRDDNLSNFPGA 407 PSG+PRPYGG RGRGRGSY S+RG+ +NNER D G +W S + KD +D ++FPGA Sbjct: 1502 PSGLPRPYGG-RGRGRGSYG-SNRGYGANNERQDSGYGTPKWDSGS-KDGEDGWNSFPGA 1558 Query: 406 KVQNSPGREAFPGSWG--------GTGG--WGGGATTG--------DKSGW--------- 308 KVQNSPG+E+FPGSWG GTGG WGGG G D +GW Sbjct: 1559 KVQNSPGKESFPGSWGAGGSGSGSGTGGSNWGGGGGGGGGGGGGGSDSAGWGQGSSGGGG 1618 Query: 307 -----GAGPSDA--EHGSSGWGTGSKKA-ADIGW 230 GAG +DA E G+SGWG+G K++ A W Sbjct: 1619 GGSWNGAGANDAGTETGNSGWGSGPKRSVAGTSW 1652 [4][TOP] >UniRef100_B9IHK1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IHK1_POPTR Length = 287 Score = 118 bits (296), Expect = 3e-25 Identities = 71/158 (44%), Positives = 81/158 (51%), Gaps = 41/158 (25%) Frame = -2 Query: 580 HPSGVPRPYGGGRGRGRGSYNNSSRGHNSNNERHDGA---TRWGSAATKDRDDNLSNFPG 410 H +G PRP+ G RGRGRGSYN S+RG+NS NER D RW S TKD D+ +FPG Sbjct: 85 HQNGPPRPFSG-RGRGRGSYN-STRGNNSGNERQDSGYDKPRWDSG-TKDNDEGWGSFPG 141 Query: 409 AKVQNSPGREAFPGSWG---------------------GTGGW----------------G 341 AKVQNSPGREAFPG WG G GW G Sbjct: 142 AKVQNSPGREAFPGGWGTGASGGDNGGRGHGNGGDTDSGNAGWGNTSLKRDSAQGGWGAG 201 Query: 340 GGATTGDKSGWGAGPSDAEHGSSGWGTGSKK-AADIGW 230 GG + G SG G G ++G+SGWG SKK GW Sbjct: 202 GGGSGGGDSGHGTGGGGTDNGNSGWGNSSKKGGTQSGW 239 [5][TOP] >UniRef100_B9SEX9 Suppressor of ty, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9SEX9_RICCO Length = 1650 Score = 115 bits (287), Expect = 3e-24 Identities = 65/129 (50%), Positives = 82/129 (63%), Gaps = 10/129 (7%) Frame = -2 Query: 580 HPSGVPRPYGGGRGRGRGSYNNSSRGHNSNNERHDGA---TRWGSAATKDRDDNLSNFPG 410 H SG+PRPYGG RG GRGSYN SRG+++ N++ + ++W S A KD D +FPG Sbjct: 1512 HQSGLPRPYGG-RGHGRGSYN--SRGNSTGNDKQESGYDNSKWDSVA-KDSDAGWGSFPG 1567 Query: 409 AKVQNSPGREAFPGSWG-GTGGWGGGATTGDKSGWGAGP-SDAEHGSSGWGTGSKKA--- 245 AKVQNSPGREAFPG WG G G G G+ G+ WG G ++ G+SGWG+ K+ Sbjct: 1568 AKVQNSPGREAFPGGWGTGGSGSGSGSVNGN---WGHGTGGGSDKGNSGWGSSLKRGFSQ 1624 Query: 244 --ADIGWSG 224 D GWSG Sbjct: 1625 SQGDGGWSG 1633 [6][TOP] >UniRef100_B9REE5 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9REE5_RICCO Length = 170 Score = 97.4 bits (241), Expect = 7e-19 Identities = 56/111 (50%), Positives = 67/111 (60%), Gaps = 1/111 (0%) Frame = -2 Query: 580 HPSGVPRPYGGGRGRGRGSYNNSSRGHNSNNERHDGATRWGSAATKDRDDNLSNFPGAKV 401 H SG+PRPYGG +G G GSY SS G NSN+ +W S A KD + + +FPGAKV Sbjct: 34 HQSGLPRPYGG-QGHGPGSY--SSSGGNSNS-------KWDSVA-KDSNSDWGSFPGAKV 82 Query: 400 QNSPGREAFPGSWGGTGGWGGGATTGDKSGWGAGPSDAEHG-SSGWGTGSK 251 QNSPGR+AFP W G+GG G G S WG G + SGWG+G K Sbjct: 83 QNSPGRQAFPAGW-GSGGNGSGDGVASGSNWGHGTGGRSYNEKSGWGSGFK 132 [7][TOP] >UniRef100_O80815 T8F5.22 protein n=1 Tax=Arabidopsis thaliana RepID=O80815_ARATH Length = 1684 Score = 79.7 bits (195), Expect = 2e-13 Identities = 50/124 (40%), Positives = 63/124 (50%), Gaps = 4/124 (3%) Frame = -2 Query: 580 HPSGVPRPYGG-GRGRGRGSYNNSSRGHNSNNERHDGATRWGSAATKDRDDNLSNFPGAK 404 HPSG PRPYGG GRGRGRG R + N++R DG WG+ T D N G Sbjct: 1514 HPSGAPRPYGGRGRGRGRG------RRDDMNSDRQDGNGDWGNNDTGTADGGWGNSGGGG 1567 Query: 403 V-QNSPGREAFPGSWGGTGGWGGGATTGDKSGWGAGPSDAEHGSSGWG--TGSKKAADIG 233 S G++ GS GG G GG + WG+G GS GWG +G KK+++ G Sbjct: 1568 WGSESAGKKTGGGSTGGWGSESGGNKSDGAGSWGSGSGGG--GSGGWGNDSGGKKSSEDG 1625 Query: 232 WSGN 221 G+ Sbjct: 1626 GFGS 1629 [8][TOP] >UniRef100_A8MS85 Uncharacterized protein At1g65440.1 n=1 Tax=Arabidopsis thaliana RepID=A8MS85_ARATH Length = 1647 Score = 79.7 bits (195), Expect = 2e-13 Identities = 50/124 (40%), Positives = 63/124 (50%), Gaps = 4/124 (3%) Frame = -2 Query: 580 HPSGVPRPYGG-GRGRGRGSYNNSSRGHNSNNERHDGATRWGSAATKDRDDNLSNFPGAK 404 HPSG PRPYGG GRGRGRG R + N++R DG WG+ T D N G Sbjct: 1477 HPSGAPRPYGGRGRGRGRG------RRDDMNSDRQDGNGDWGNNDTGTADGGWGNSGGGG 1530 Query: 403 V-QNSPGREAFPGSWGGTGGWGGGATTGDKSGWGAGPSDAEHGSSGWG--TGSKKAADIG 233 S G++ GS GG G GG + WG+G GS GWG +G KK+++ G Sbjct: 1531 WGSESAGKKTGGGSTGGWGSESGGNKSDGAGSWGSGSGGG--GSGGWGNDSGGKKSSEDG 1588 Query: 232 WSGN 221 G+ Sbjct: 1589 GFGS 1592 [9][TOP] >UniRef100_UPI00019861D7 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI00019861D7 Length = 1891 Score = 63.5 bits (153), Expect = 1e-08 Identities = 51/137 (37%), Positives = 58/137 (42%), Gaps = 22/137 (16%) Frame = -2 Query: 568 VPRPYGGG----RGRGRGSYNNS--------SRGHNSNNERHDGATRWGSAATKDRDDNL 425 V P GGG G RG +N+S SRG N N R DG W Sbjct: 1539 VGAPTGGGWESNTGGWRGQFNSSRDKTCTPSSRGGNENRSRGDGGDGW------------ 1586 Query: 424 SNFPGAKVQNSPGREAFPGSWGGTGG------WGGGATTGDKSGWGAGPSDAEHGSS--G 269 S+FPGA+V NSPGRE P WG + G GGG T KS +G HG S Sbjct: 1587 SSFPGAEVLNSPGREVPPAGWGSSSGRAGVENLGGGGRT--KSWGSSGVGSWGHGRSTHH 1644 Query: 268 WGTGSK--KAADIGWSG 224 WG S+ A W G Sbjct: 1645 WGGSSRGGTARGSNWGG 1661 Score = 58.2 bits (139), Expect = 5e-07 Identities = 44/136 (32%), Positives = 53/136 (38%), Gaps = 36/136 (26%) Frame = -2 Query: 556 YGGGRGRGRGSYNNS------------SRGHNSNNERHDGATRWGSAATKDR-------- 437 +GG RG GRGS + GH S N + +G+ + + Sbjct: 1659 WGGARGNGRGSGSQGCGSNGHGPGRGCGHGHGSYNAKDQKEFGYGAGSERGSVLNVEDKS 1718 Query: 436 --DDNLSNFPGAKVQNSPGREAFPGSWGGTGG--------WGGGATTG---DKSGWGAGP 296 D N PG KVQN P R A WG G GGG+T G DK+ G G Sbjct: 1719 WDSDGWGNLPGFKVQNPPSRAASSDGWGSWGRSKASDNNEGGGGSTDGWGNDKASGGNGS 1778 Query: 295 SDAEHGSSG---WGTG 257 E GSSG WG G Sbjct: 1779 GSGEAGSSGPCTWGNG 1794 [10][TOP] >UniRef100_C5Z0A7 Putative uncharacterized protein Sb09g024270 n=1 Tax=Sorghum bicolor RepID=C5Z0A7_SORBI Length = 1687 Score = 56.2 bits (134), Expect = 2e-06 Identities = 42/134 (31%), Positives = 56/134 (41%), Gaps = 14/134 (10%) Frame = -2 Query: 553 GGGRGRGRGSYNNSSRGHNSNNERHDGATRWGSAATKDRDDNLSNFPGAKVQNSPGREAF 374 G GRGRGRG++ N G G + G + DN+ + G G ++ Sbjct: 1551 GRGRGRGRGNFGNDDNGGG-------GWSGGGGGNSGGWTDNIGSGGGGWGTGGSGGSSW 1603 Query: 373 PGSWGGTGG------WGGG-----ATTGDKSGWGAGPSDAEH---GSSGWGTGSKKAADI 236 G GGTGG WGGG + G SGWG+ S A+ G+ WG + + D Sbjct: 1604 GG--GGTGGGSDAAGWGGGIGGDDSNRGGGSGWGSAASGADSAGGGNGAWGAAAGGSNDS 1661 Query: 235 GWSGN*LTVAALAG 194 GW V A G Sbjct: 1662 GWGSAKKAVPAQEG 1675 [11][TOP] >UniRef100_Q13UU1 Putative lipoprotein n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13UU1_BURXL Length = 351 Score = 54.7 bits (130), Expect = 5e-06 Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 1/118 (0%) Frame = -2 Query: 574 SGVPRPYGGGRGRGRGSYNNSSRGHNSNNERHDGATRWGSAATKDRDDNLSNFPGAKVQN 395 SG GGG+G G GS N SS G +S G + G ++ S+ G+ Sbjct: 154 SGSAGASGGGKGNGNGSGNGSSGGGSSGGGSSGGGSSGGGSSGGGSSGGGSSGGGSSGGG 213 Query: 394 SPGREAFPGSWGGTGGWGGGATTGDKSGWG-AGPSDAEHGSSGWGTGSKKAADIGWSG 224 S G + G G G GGG++ G SG G +G + GSSG G+ ++ G SG Sbjct: 214 SSGGGSSGGGSSGGGSSGGGSSGGGSSGGGSSGGGSSGGGSSGGGSSGGGSSGGGSSG 271 [12][TOP] >UniRef100_UPI0001505667 GTB1; RNA binding / hydrolase, acting on ester bonds / transcription elongation regulator n=1 Tax=Arabidopsis thaliana RepID=UPI0001505667 Length = 1642 Score = 54.3 bits (129), Expect = 7e-06 Identities = 33/84 (39%), Positives = 39/84 (46%), Gaps = 1/84 (1%) Frame = -2 Query: 580 HPSGVPRPYGG-GRGRGRGSYNNSSRGHNSNNERHDGATRWGSAATKDRDDNLSNFPGAK 404 HPSG PRPYGG GRGRGRG R + N++R DG WG+ T D Sbjct: 1477 HPSGAPRPYGGRGRGRGRG------RRDDMNSDRQDGNGDWGNNDTGTAD---------- 1520 Query: 403 VQNSPGREAFPGSWGGTGGWGGGA 332 G WG +GG G G+ Sbjct: 1521 -----------GGWGNSGGGGWGS 1533 [13][TOP] >UniRef100_UPI0000221C5C Hypothetical protein CBG24057 n=1 Tax=Caenorhabditis briggsae AF16 RepID=UPI0000221C5C Length = 294 Score = 53.9 bits (128), Expect = 9e-06 Identities = 41/133 (30%), Positives = 52/133 (39%), Gaps = 22/133 (16%) Frame = -2 Query: 553 GGGRGRGRG-SYNNSSRGHNSNNERHDGATRWGSAATKDRDDNLSNFPGAKVQNSPGREA 377 GGGRG G+G S RG + G + G ++D S+ G +S G+ Sbjct: 63 GGGRGGGQGGSGRGGGRGGGQGGQGGQGGGQGGWGGSQDSG---SSGQGGWGGSSGGQGG 119 Query: 376 FPGSWGG--------TGGWGG---GATTGDKSGW--------GAGPSDAEHGSSGWG--T 260 PG WGG GGWGG G G+ GW G G + G GWG Sbjct: 120 SPGGWGGDSGSQGGSQGGWGGSQNGGQGGNSGGWGGSQGGQQGGGGRGGQGGQGGWGGSQ 179 Query: 259 GSKKAADIGWSGN 221 S GW G+ Sbjct: 180 DSGSGGQGGWGGS 192 [14][TOP] >UniRef100_A8WJW4 C. briggsae CBR-GRSP-2 protein n=1 Tax=Caenorhabditis briggsae RepID=A8WJW4_CAEBR Length = 255 Score = 53.9 bits (128), Expect = 9e-06 Identities = 41/133 (30%), Positives = 52/133 (39%), Gaps = 22/133 (16%) Frame = -2 Query: 553 GGGRGRGRG-SYNNSSRGHNSNNERHDGATRWGSAATKDRDDNLSNFPGAKVQNSPGREA 377 GGGRG G+G S RG + G + G ++D S+ G +S G+ Sbjct: 63 GGGRGGGQGGSGRGGGRGGGQGGQGGQGGGQGGWGGSQDSG---SSGQGGWGGSSGGQGG 119 Query: 376 FPGSWGG--------TGGWGG---GATTGDKSGW--------GAGPSDAEHGSSGWG--T 260 PG WGG GGWGG G G+ GW G G + G GWG Sbjct: 120 SPGGWGGDSGSQGGSQGGWGGSQNGGQGGNSGGWGGSQGGQQGGGGRGGQGGQGGWGGSQ 179 Query: 259 GSKKAADIGWSGN 221 S GW G+ Sbjct: 180 DSGSGGQGGWGGS 192 [15][TOP] >UniRef100_A4I8P4 RNA binding protein rggm, putative n=1 Tax=Leishmania infantum RepID=A4I8P4_LEIIN Length = 327 Score = 53.9 bits (128), Expect = 9e-06 Identities = 37/114 (32%), Positives = 46/114 (40%), Gaps = 3/114 (2%) Frame = -2 Query: 553 GGGRGRGRGSYNNSSRGHNSNNERHDGATRWGSAATKDRDD---NLSNFPGAKVQNSPGR 383 GGG G G + S+ G S + A WGSA + + A S G Sbjct: 25 GGGGGWGSAGNSTSAGGWGSAGDT-TSAGGWGSAGDSTSAGGWGSAGDTTSAGGWGSAGN 83 Query: 382 EAFPGSWGGTGGWGGGATTGDKSGWGAGPSDAEHGSSGWGTGSKKAADIGWSGN 221 G WG GG G G + KSGWG A+ S GWG G + GW G+ Sbjct: 84 STSAGGWGSAGGRGRGCGSRGKSGWG-----AKESSDGWG-GGRGGGQSGWGGD 131