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[1][TOP]
>UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TFU4_SOYBN
Length = 208
Score = 241 bits (615), Expect = 3e-62
Identities = 131/188 (69%), Positives = 151/188 (80%), Gaps = 1/188 (0%)
Frame = +3
Query: 6 FNFHTNLLRLSSYSSSHPSQ-FSSKTKLPSTTFLTGGSTSQLLKFKHATATTTTKRRGTA 182
FNF++ L R S Y PS + + STTFL ++ K+A AT+T+ R +
Sbjct: 5 FNFNSTL-RPSCYLPLSPSSSYPHFSNTLSTTFL-----GHIVTLKYA-ATSTSNRGRSL 57
Query: 183 SISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGG 362
S MSWDGPLSSVKLIIQG+N+EL+DAVK+HVEDKVG+ +QKHS+LVREVDVRLS RGGG
Sbjct: 58 STRMSWDGPLSSVKLIIQGKNLELTDAVKRHVEDKVGKAVQKHSHLVREVDVRLSIRGGG 117
Query: 363 EFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 542
EFGRGPRTRRCEVTL+TKRHGVVRAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGRH
Sbjct: 118 EFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRH 177
Query: 543 MKGPNRLK 566
MKG NRLK
Sbjct: 178 MKGFNRLK 185
[2][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T7E3_SOYBN
Length = 291
Score = 239 bits (611), Expect = 8e-62
Identities = 131/190 (68%), Positives = 148/190 (77%)
Frame = +3
Query: 6 FNFHTNLLRLSSYSSSHPSQFSSKTKLPSTTFLTGGSTSQLLKFKHATATTTTKRRGTAS 185
FNF++ L + SS S + K STTFL G T L K+A + + R + S
Sbjct: 5 FNFNSTLRPSCYHPSSPSSSYPHFFKTLSTTFL--GHTVTL---KYAATSASIPPR-SLS 58
Query: 186 ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGE 365
MSWDGPLSSVKL IQG+N+EL+DAVKQHVEDKVG+ +QKHS+LVREVDVRLS RGGGE
Sbjct: 59 AHMSWDGPLSSVKLTIQGKNLELTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGGE 118
Query: 366 FGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM 545
FGRGPRTRRCEVTL+TKRHGVVRAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGRHM
Sbjct: 119 FGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHM 178
Query: 546 KGPNRLKFSE 575
KG NRLK E
Sbjct: 179 KGFNRLKVRE 188
[3][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984F94
Length = 298
Score = 220 bits (560), Expect = 7e-56
Identities = 114/177 (64%), Positives = 140/177 (79%)
Frame = +3
Query: 36 SSYSSSHPSQFSSKTKLPSTTFLTGGSTSQLLKFKHATATTTTKRRGTASISMSWDGPLS 215
S YSSS + S L + + +GGS+ +LK TT++ ++ MSWDGPLS
Sbjct: 24 SPYSSSFLASSKSLRSLSNLSSSSGGSS--ILKLN-----ATTRQTKPLAVRMSWDGPLS 76
Query: 216 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 395
SVKLI+QG+N+EL+D V+ HVE+KVG+ +QKHS+LVREVDVRLS RGG E G+GP+ RRC
Sbjct: 77 SVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGG-ELGKGPKIRRC 135
Query: 396 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK 566
EVTL+TK+HGVVRAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG NRLK
Sbjct: 136 EVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLK 192
[4][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
Length = 306
Score = 219 bits (558), Expect = 1e-55
Identities = 113/177 (63%), Positives = 133/177 (75%)
Frame = +3
Query: 45 SSSHPSQFSSKTKLPSTTFLTGGSTSQLLKFKHATATTTTKRRGTASISMSWDGPLSSVK 224
S + S S+KT++P ++ + + + T G S+ MSWDGPL SVK
Sbjct: 28 SLASSSVISTKTQIPKSSLKSSFLGKNMSFIELGRTARTPLTHGGCSVKMSWDGPLHSVK 87
Query: 225 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT 404
LIIQG+N+EL+D VK+HVEDKVG+ +QKHS+LVREVDVRLS RGG E G+GPR RRCEVT
Sbjct: 88 LIIQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGG-ELGKGPRIRRCEVT 146
Query: 405 LYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 575
L+T RHGVVRAEE AET Y SIDLVSSIIQRKLRKIKEKE+DHGRHMKG NRLK E
Sbjct: 147 LFTNRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVRE 203
[5][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SEK8_RICCO
Length = 311
Score = 215 bits (547), Expect = 2e-54
Identities = 111/169 (65%), Positives = 131/169 (77%)
Frame = +3
Query: 69 SSKTKLPSTTFLTGGSTSQLLKFKHATATTTTKRRGTASISMSWDGPLSSVKLIIQGRNM 248
S K +LPS + + S LK KR +++ MSW+GPLSSVKLI QG+N+
Sbjct: 38 SKKLRLPSFSLSSKTSFLNPLKLGSNVKYFENKRGRRSAVRMSWEGPLSSVKLITQGKNL 97
Query: 249 ELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 428
EL+D VK+HVEDKVG+ +QKHS+LVREVDVRLS RGG EFG+GP+ RRCEVTL+TK+HGV
Sbjct: 98 ELTDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGG-EFGKGPKIRRCEVTLFTKKHGV 156
Query: 429 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 575
+RAEE AET Y SIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK E
Sbjct: 157 IRAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVRE 205
[6][TOP]
>UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJW3_9ROSI
Length = 268
Score = 211 bits (537), Expect = 3e-53
Identities = 120/196 (61%), Positives = 142/196 (72%), Gaps = 5/196 (2%)
Frame = +3
Query: 3 HFNFHTNLLRLSSYSS--SHPSQF--SSKTKLPSTTFLTGGSTSQLLKFKHATATTTTK- 167
H +F+ + L+S + S S F S+KT++P FL + + F T
Sbjct: 9 HASFNNRIAPLTSTTPTPSLASSFVNSTKTQVPKV-FLKSRFLGKNVNFAEIRRKTKIPL 67
Query: 168 RRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS 347
G +SI MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS
Sbjct: 68 SHGGSSIRMSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLS 127
Query: 348 TRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 527
RGG E G+GPR RRCEVTL+TKRHGVVRAEE AET Y SIDL SSIIQRKLRKIK+KE+
Sbjct: 128 VRGG-ELGKGPRIRRCEVTLFTKRHGVVRAEEDAETIYASIDLASSIIQRKLRKIKDKES 186
Query: 528 DHGRHMKGPNRLKFSE 575
DHGRHMKG NRLK E
Sbjct: 187 DHGRHMKGFNRLKVRE 202
[7][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
thaliana RepID=Q9FLV3_ARATH
Length = 365
Score = 210 bits (535), Expect = 5e-53
Identities = 102/135 (75%), Positives = 120/135 (88%)
Frame = +3
Query: 171 RGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLST 350
R + ++ MSWDGPL+SVKLIIQG+N+ELS+ +KQHVE+KVG+ +QKHS+LVREVDVRLS
Sbjct: 123 RSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSV 182
Query: 351 RGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
RGG EFG+GPR RRCEVTL+TK+HGVVRAEE AET Y IDLVS+IIQRKLRKIKEK++D
Sbjct: 183 RGG-EFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSD 241
Query: 531 HGRHMKGPNRLKFSE 575
HGRHMKG NRLK E
Sbjct: 242 HGRHMKGFNRLKVRE 256
[8][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PHY3_POPTR
Length = 306
Score = 210 bits (534), Expect = 7e-53
Identities = 120/196 (61%), Positives = 142/196 (72%), Gaps = 5/196 (2%)
Frame = +3
Query: 3 HFNFHTNLLRLSSYSS--SHPSQF--SSKTKLPSTTFLTGGSTSQLLKFKHATATTTTK- 167
H F+ + L+S + S S F S+KT++P FL + + F T
Sbjct: 9 HAGFNNRIAPLTSTTPTPSLASSFVNSTKTQVPKV-FLKSRFLGKNVNFVEIRRKTKIPL 67
Query: 168 RRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS 347
G +SI MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS
Sbjct: 68 SHGGSSIRMSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLS 127
Query: 348 TRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 527
RGG E G+GPR RRCEVTL+TKRHGVVRAEE AET + SIDLVSSIIQRKLRKIK+KE+
Sbjct: 128 VRGG-ELGKGPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKES 186
Query: 528 DHGRHMKGPNRLKFSE 575
DHGRHMKG NRLK E
Sbjct: 187 DHGRHMKGFNRLKVRE 202
[9][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QEV5_VITVI
Length = 230
Score = 209 bits (531), Expect = 2e-52
Identities = 100/125 (80%), Positives = 116/125 (92%)
Frame = +3
Query: 192 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 371
MSWDGPLSSVKLI+QG+N+EL+D V+ HVE+KVG+ +QKHS+LVREVDVRLS RGG E G
Sbjct: 1 MSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGG-ELG 59
Query: 372 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 551
+GP+ RRCEVTL+TK+HGVVRAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG
Sbjct: 60 KGPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKG 119
Query: 552 PNRLK 566
NRLK
Sbjct: 120 FNRLK 124
[10][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
Length = 231
Score = 202 bits (515), Expect = 1e-50
Identities = 102/128 (79%), Positives = 114/128 (89%)
Frame = +3
Query: 192 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 371
MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS RGG E G
Sbjct: 1 MSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELG 59
Query: 372 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 551
+GPR RRCEVTL+TKRHGVVRAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG
Sbjct: 60 KGPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKG 119
Query: 552 PNRLKFSE 575
NRLK E
Sbjct: 120 FNRLKVRE 127
[11][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
RepID=Q672Q2_SOLLC
Length = 311
Score = 202 bits (514), Expect = 1e-50
Identities = 108/181 (59%), Positives = 135/181 (74%), Gaps = 4/181 (2%)
Frame = +3
Query: 36 SSYSSSHPSQFSSKTKLPSTTFLTGGSTSQLLK--FKHATATTTTKRRGTAS--ISMSWD 203
SSYSSS P+ T P+ + + S+ L FK + R T S + MSWD
Sbjct: 25 SSYSSSCPA-----TASPALSLTLSSTNSRFLNSAFKMNEINVPVRNRVTKSFGVRMSWD 79
Query: 204 GPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR 383
GPLSSVKLI+QG+N+EL+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E G+GP+
Sbjct: 80 GPLSSVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-ELGKGPK 138
Query: 384 TRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 563
RRCEVTL+TK+HGV+RAEE E+ YGSID+VSSIIQRKLRKIKEK++D GRHMKG +RL
Sbjct: 139 IRRCEVTLFTKKHGVIRAEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHMKGFDRL 198
Query: 564 K 566
K
Sbjct: 199 K 199
[12][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
RepID=C9EFD1_SOLTU
Length = 280
Score = 198 bits (504), Expect = 2e-49
Identities = 103/167 (61%), Positives = 127/167 (76%), Gaps = 4/167 (2%)
Frame = +3
Query: 78 TKLPSTTFLTGGSTSQLLK--FKHATATTTTKRRGTAS--ISMSWDGPLSSVKLIIQGRN 245
T P+ + S S L FK + R S + MSWDGPLSSVKLI+QG+N
Sbjct: 6 TASPAFSLTLSSSNSGFLNSAFKKNEINVPVRNRVKXSFGVRMSWDGPLSSVKLILQGKN 65
Query: 246 MELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 425
+EL+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E G+GP+ RRCEVTL+TK+HG
Sbjct: 66 LELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-ELGKGPKIRRCEVTLFTKKHG 124
Query: 426 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK 566
V+RAEE AE+ YGSID+VSSIIQRKLRKIKEK++DHGRHMKG +RLK
Sbjct: 125 VIRAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLK 171
[13][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RR30_SPIOL
Length = 302
Score = 197 bits (501), Expect = 5e-49
Identities = 110/183 (60%), Positives = 129/183 (70%)
Frame = +3
Query: 18 TNLLRLSSYSSSHPSQFSSKTKLPSTTFLTGGSTSQLLKFKHATATTTTKRRGTASISMS 197
TN L S SS P+ SS +TF S L A + R + MS
Sbjct: 16 TNSLSNSINLSSTPTNLSSLR----STFTNSCS----LGLNVAVKSVQISRNKPNVVCMS 67
Query: 198 WDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRG 377
WDGPLSSVKLI+QGRN+E+SD V+ HVEDKVG+ + KHS+LVREVDVRLS RGG + +G
Sbjct: 68 WDGPLSSVKLILQGRNLEVSDNVRSHVEDKVGKSVAKHSHLVREVDVRLSARGG-DLSKG 126
Query: 378 PRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN 557
P+ RRCEVTL+TKRHGV+RAEE AE+ Y SIDLVSSIIQRKLRKIK+K +DHGRHMKG N
Sbjct: 127 PKLRRCEVTLFTKRHGVIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHMKGFN 186
Query: 558 RLK 566
R K
Sbjct: 187 RSK 189
[14][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
Length = 309
Score = 179 bits (455), Expect = 1e-43
Identities = 88/130 (67%), Positives = 109/130 (83%)
Frame = +3
Query: 162 TKRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 341
++R S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR
Sbjct: 62 SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121
Query: 342 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
LS RGG E RGP+ RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK
Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180
Query: 522 ETDHGRHMKG 551
ETD RH+KG
Sbjct: 181 ETD-VRHLKG 189
[15][TOP]
>UniRef100_Q10AC8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative,
expressed n=1 Tax=Oryza sativa Japonica Group
RepID=Q10AC8_ORYSJ
Length = 241
Score = 179 bits (455), Expect = 1e-43
Identities = 88/130 (67%), Positives = 109/130 (83%)
Frame = +3
Query: 162 TKRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 341
++R S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR
Sbjct: 62 SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121
Query: 342 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
LS RGG E RGP+ RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK
Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180
Query: 522 ETDHGRHMKG 551
ETD RH+KG
Sbjct: 181 ETD-VRHLKG 189
[16][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
RepID=C6YXL0_ORYSJ
Length = 321
Score = 179 bits (455), Expect = 1e-43
Identities = 88/130 (67%), Positives = 109/130 (83%)
Frame = +3
Query: 162 TKRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 341
++R S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR
Sbjct: 62 SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121
Query: 342 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
LS RGG E RGP+ RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK
Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180
Query: 522 ETDHGRHMKG 551
ETD RH+KG
Sbjct: 181 ETD-VRHLKG 189
[17][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
bicolor RepID=C5WRX8_SORBI
Length = 310
Score = 179 bits (455), Expect = 1e-43
Identities = 87/129 (67%), Positives = 110/129 (85%)
Frame = +3
Query: 165 KRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRL 344
+RR + S+ M+WDGPLSSV+LI+QGRN++LSD +K+H+EDKVGR + KH +LVREVDVRL
Sbjct: 54 RRRVSFSVRMAWDGPLSSVRLIMQGRNVKLSDKLKEHIEDKVGRAVSKHCHLVREVDVRL 113
Query: 345 STRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 524
S R GGE GRGP+T RCE+TL++KRHGV+RAEE AE+TY SIDL ++II+RKLRKIKEKE
Sbjct: 114 SAR-GGELGRGPKTSRCEITLFSKRHGVLRAEEDAESTYASIDLAAAIIKRKLRKIKEKE 172
Query: 525 TDHGRHMKG 551
T+ R G
Sbjct: 173 TEVRRDGDG 181
[18][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
RepID=B6TYP8_MAIZE
Length = 309
Score = 178 bits (451), Expect = 3e-43
Identities = 84/124 (67%), Positives = 107/124 (86%)
Frame = +3
Query: 159 TTKRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDV 338
T +RR + S+ M+WDGPLSSV+LI+Q RN +LS+ +K+H+EDKVGR + KH +LVREVDV
Sbjct: 52 TRRRRVSVSVRMAWDGPLSSVRLIMQSRNAKLSEKLKEHIEDKVGRAVSKHCHLVREVDV 111
Query: 339 RLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 518
RLS RGG E GRGP+T RCE+TL+TKRHGV+RAEE AE+TY SIDL ++I++RKLRKIKE
Sbjct: 112 RLSARGG-ELGRGPKTSRCEITLFTKRHGVLRAEEDAESTYASIDLAAAIVKRKLRKIKE 170
Query: 519 KETD 530
KET+
Sbjct: 171 KETE 174
[19][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LMC5_PICSI
Length = 321
Score = 175 bits (443), Expect = 3e-42
Identities = 90/149 (60%), Positives = 113/149 (75%)
Frame = +3
Query: 129 LKFKHATATTTTKRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQK 308
L++K + T RG + ++ W GPLSSV+LIIQG+N +L+DAVK ++E+KVG +QK
Sbjct: 59 LRWKFSVCPIVTSSRGQINCTL-WSGPLSSVRLIIQGKNFQLTDAVKAYIEEKVGIAVQK 117
Query: 309 HSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSI 488
H+ LVREVDVRLS RGG E G+GP+ RRCEVTL+TK+HGVVRAEE AET Y SID+VS I
Sbjct: 118 HANLVREVDVRLSIRGG-EVGKGPKIRRCEVTLFTKKHGVVRAEEEAETIYASIDIVSDI 176
Query: 489 IQRKLRKIKEKETDHGRHMKGPNRLKFSE 575
I+RKLRKIKEK+ HGR K + K E
Sbjct: 177 IRRKLRKIKEKDGGHGRPSKMRKQPKLGE 205
[20][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TA00_PHYPA
Length = 297
Score = 157 bits (396), Expect = 7e-37
Identities = 77/132 (58%), Positives = 101/132 (76%)
Frame = +3
Query: 168 RRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS 347
++G + M+W G L+ V+L+IQG+++EL+DA+KQ+VE+KVG + S LV+EVDVR+S
Sbjct: 71 QKGRVTTCMAWGGTLAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMS 130
Query: 348 TRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 527
RGG E GRG R +RCEVTL+TK+HGVVRAEE AE+ Y SID VS +I RKLRKIKEK+
Sbjct: 131 VRGG-ETGRGERLQRCEVTLFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDG 189
Query: 528 DHGRHMKGPNRL 563
HGR K R+
Sbjct: 190 GHGRPAKYSPRI 201
[21][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWK9_PHYPA
Length = 221
Score = 153 bits (386), Expect = 1e-35
Identities = 75/128 (58%), Positives = 98/128 (76%)
Frame = +3
Query: 192 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 371
M+W G L+ V+L+IQG+++EL+DA+KQ+VE+KVG + S LV+EVDVR+S RGG E G
Sbjct: 1 MAWGGALAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGG-ETG 59
Query: 372 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 551
RG + +RCEVTL+TK+HGVVRAEE AE+ Y SID VS +I RKLRKIKEK+ HGR K
Sbjct: 60 RGGKLQRCEVTLFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPTKS 119
Query: 552 PNRLKFSE 575
+ + E
Sbjct: 120 RHSPRIGE 127
[22][TOP]
>UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR
Length = 127
Score = 138 bits (347), Expect = 3e-31
Identities = 73/110 (66%), Positives = 86/110 (78%)
Frame = +3
Query: 246 MELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 425
M+L+D VK+HVEDKVG+ +QK S+LVREVD RLS R GGE G+GPR R+C RHG
Sbjct: 1 MQLTDTVKEHVEDKVGKAVQKFSHLVREVDARLSVR-GGELGKGPRIRKC-------RHG 52
Query: 426 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 575
VVRAEE +ET Y +IDLV SIIQ KLRK+KE E+DHGRHMKG NRLK +
Sbjct: 53 VVRAEEDSETIYATIDLVLSIIQSKLRKMKE-ESDHGRHMKGLNRLKIRD 101
[23][TOP]
>UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas
reinhardtii RepID=A8J8B2_CHLRE
Length = 286
Score = 103 bits (256), Expect = 1e-20
Identities = 54/131 (41%), Positives = 78/131 (59%)
Frame = +3
Query: 144 ATATTTTKRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLV 323
A T R G + S +V++IIQGR + ++DA+K +VE+KV + + S+ +
Sbjct: 45 AVVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTL 104
Query: 324 REVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKL 503
+EVDV LS RGG G + ++ EVT+YT R+GVVR E+ Y +IDLV I+ KL
Sbjct: 105 KEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKL 164
Query: 504 RKIKEKETDHG 536
+KIKEK G
Sbjct: 165 QKIKEKAISRG 175
[24][TOP]
>UniRef100_Q5MCR1 Chloroplast-specific ribosome-associated protein n=1 Tax=Volvox
carteri f. nagariensis RepID=Q5MCR1_VOLCA
Length = 232
Score = 98.2 bits (243), Expect = 4e-19
Identities = 46/109 (42%), Positives = 75/109 (68%)
Frame = +3
Query: 213 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR 392
S+V++IIQGR + +++A+K++VE+KV + IQ ++ ++EVDV LS RGG G + ++
Sbjct: 72 STVRIIIQGRKLPVTNAIKEYVEEKVAKAIQNFAHTLKEVDVTLSARGGDTGTHGKKEQK 131
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 539
+VT++T R+GVVR E+ Y +IDLV I+ KL ++KEK G+
Sbjct: 132 VDVTIFTLRNGVVRVEDRESNLYAAIDLVCDKIRSKLTRVKEKAITKGK 180
[25][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
Length = 284
Score = 93.6 bits (231), Expect = 1e-17
Identities = 47/106 (44%), Positives = 78/106 (73%), Gaps = 2/106 (1%)
Frame = +3
Query: 213 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHS-YLVREVDVRLSTRGGGEFGR-GPRT 386
+S K+I+QGR++E++D+++++ E+K+ + + + VREVDVR S+RGG + G
Sbjct: 78 ASTKVIVQGRHLEITDSIREYAEEKINKAVAHFDQHDVREVDVRCSSRGGADKKTPGGAL 137
Query: 387 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 524
++ EVT+YT R+G++R+EE A+ Y SID VS ++RKLRK+KEK+
Sbjct: 138 QKTEVTVYT-RNGIIRSEEEADDLYASIDAVSDKLERKLRKVKEKK 182
[26][TOP]
>UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N7A9_9CHLO
Length = 245
Score = 89.4 bits (220), Expect = 2e-16
Identities = 53/138 (38%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +3
Query: 114 STSQLLKFKHATATTTTKRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVG 293
+T + L+ + +T + R + + +M+ P K+I+QGR++E+++A++ + E K+
Sbjct: 13 TTPRALRGRSLASTRVSSVRASGARAMA--APAKGTKVIVQGRHLEITEAIRDYCEQKIN 70
Query: 294 RVIQKHS-YLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSI 470
+ + + VREVDV S R E +G + +VT+YT R+GVVR+EE A+ Y SI
Sbjct: 71 KAVSHFDMHDVREVDVTCSARS--EKQQGGDLQMTQVTVYT-RNGVVRSEEEADNLYASI 127
Query: 471 DLVSSIIQRKLRKIKEKE 524
D VS I+RKLRKIKEK+
Sbjct: 128 DAVSDKIERKLRKIKEKK 145
[27][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
Length = 209
Score = 81.3 bits (199), Expect = 5e-14
Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 389
+KL+I G+N+E++DA++ +V+ K+ + L E+DV LS R PR +
Sbjct: 1 MKLVIHGKNIEITDAIRDYVQQKIEKAANHFQNLTTEIDVHLSV------ARNPRINPKQ 54
Query: 390 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD-HGRHMKGP 554
EVT+YT V+RAEE +E Y SIDLVS I R+LRK KE+ D H R + P
Sbjct: 55 TAEVTIYTNG-SVIRAEESSENLYASIDLVSDKIARQLRKFKERRQDKHSRSKEEP 109
[28][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0CDL4_ACAM1
Length = 212
Score = 80.9 bits (198), Expect = 7e-14
Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TR 389
+KL+I G+N+E++DA++++V K+ + + L E+DV LS R PR +
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAANHYQNLTTEIDVHLSV------ARNPRITTKQ 54
Query: 390 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 560
EVTL+ V+RAEE +E Y SIDLV+ I R+LRK KEK R KGPN+
Sbjct: 55 TAEVTLFV-NGSVIRAEESSENLYASIDLVADKIARQLRKYKEK-----RQTKGPNK 105
[29][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
azollae' 0708 RepID=B9YPU1_ANAAZ
Length = 214
Score = 79.7 bits (195), Expect = 1e-13
Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 389
+KL+I G+N+E++DA++++V K+ R + + EV+V LS R PR +
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIERAVNHFQSITNEVNVHLSV------ARNPRISTKQ 54
Query: 390 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT+Y V+RAEE +E Y SIDLV+ I R+LRK KE+ DH
Sbjct: 55 AAEVTIYANG-SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDH 101
[30][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VJW0_9CYAN
Length = 215
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TR 389
+KL+IQG+N+E++D+++++V K+ + + + EVDV LS R PR +
Sbjct: 1 MKLVIQGKNIEITDSIREYVNQKIEKAVNHFQNMTTEVDVHLSV------ARNPRINTKQ 54
Query: 390 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 524
EVT+Y + V+RA+E +E Y SIDLV+ IQR+LRK KEK+
Sbjct: 55 TAEVTIYANK-TVIRAQESSEDLYASIDLVADKIQRQLRKYKEKQ 98
[31][TOP]
>UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
CC9311 RepID=Q0ICJ8_SYNS3
Length = 191
Score = 79.0 bits (193), Expect = 2e-13
Identities = 44/108 (40%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+KL+I GRN++++ A++++ E K+ R I LV+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLDVTPALREYTETKLERAIHHFDDLVKEADVHLSV------ARNPRVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG 536
EVT++ V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DHG
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRFKERHSDHG 101
[32][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YIH4_9CYAN
Length = 212
Score = 79.0 bits (193), Expect = 2e-13
Identities = 44/115 (38%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TR 389
+KL++QG+N+E+++A+ ++V K+ + + + L EVDV LS R PR +
Sbjct: 1 MKLVVQGKNLEITEAIHEYVHQKITKAVSHYQQLTNEVDVHLS------IARNPRINPKQ 54
Query: 390 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP 554
EVT+Y V+RA+E +E Y SIDLV+ I R+LRK K+K G+H+ P
Sbjct: 55 TAEVTIYA-NGTVIRAQESSENLYASIDLVADKIARQLRKFKDKR--QGKHLHPP 106
[33][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YSA5_ANASP
Length = 213
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 392
+KL+I G+N+E++DA++++V K+ + + + EVDV LS R PR TR+
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQ 54
Query: 393 -CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
EVT+Y V+RAEE +E Y SIDLV+ I R+LRK KE++ D
Sbjct: 55 AAEVTIYA-NGSVIRAEESSENLYASIDLVADKISRQLRKYKERKQD 100
[34][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
Length = 213
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 392
+KL+I G+N+E++DA++++V K+ + + + EVDV LS R PR TR+
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQ 54
Query: 393 -CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
EVT+Y V+RAEE +E Y SIDLV+ I R+LRK KE++ D
Sbjct: 55 AAEVTIYA-NGSVIRAEESSENLYASIDLVADKISRQLRKYKERKQD 100
[35][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=Q2JS19_SYNJA
Length = 191
Score = 78.6 bits (192), Expect = 3e-13
Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Frame = +3
Query: 222 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRR 392
KL+IQG+N+E++DA++ +V++K+ R ++ + + EVDV LS R PR +
Sbjct: 3 KLVIQGKNVEITDAIRSYVQEKIERAVKHFAQITSEVDVNLSV------ARNPRISANQS 56
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT+Y V+RAEE +E Y SID V+ + RKLRK KE+ H
Sbjct: 57 AEVTVYA-NGTVIRAEESSENLYASIDRVADKLARKLRKYKERNGVH 102
[36][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
Length = 190
Score = 78.6 bits (192), Expect = 3e-13
Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Frame = +3
Query: 222 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRR 392
KL+IQG+N+E++DA++ +V++K+ R + + + EVDV LS R PR ++
Sbjct: 3 KLVIQGKNVEITDAIRSYVQEKIERAVSHFAQITSEVDVNLSV------ARNPRISASQS 56
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT+Y V+RAEE +E Y SID V+ + RKLRK KE+ H
Sbjct: 57 AEVTVYA-NGTVIRAEESSENLYASIDRVADKLARKLRKYKERNGIH 102
[37][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
Length = 212
Score = 78.6 bits (192), Expect = 3e-13
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TR 389
+KL+IQG+N+E++DA+ ++V+ K+ + + L EVDV LS R PR +
Sbjct: 1 MKLVIQGKNLEITDAIHEYVQQKIAKAVSHFQQLTNEVDVHLSV------ARNPRINPRQ 54
Query: 390 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
EVT+Y V+RA+E +E Y SIDLV+ I R+LRK KEK
Sbjct: 55 TAEVTIYA-NGTVIRAQESSENLYASIDLVADKIARQLRKYKEK 97
[38][TOP]
>UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp.
RS9917 RepID=A3ZA02_9SYNE
Length = 195
Score = 77.8 bits (190), Expect = 6e-13
Identities = 45/113 (39%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+KL+I GRN+EL+ A++ + + K+ R +Q +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLELTPALRDYTQSKLERAVQHFDDMVKEADVHLSV------ARNPRVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 551
EVT++ V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H G
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRFKERHSDH-HHSNG 105
[39][TOP]
>UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
RepID=Q05SE1_9SYNE
Length = 195
Score = 77.0 bits (188), Expect = 9e-13
Identities = 42/107 (39%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+KL+I GRN+E++ A++++ E K+ R +Q + +V E DV LS R PR +
Sbjct: 1 MKLLIHGRNLEVTAALREYTESKLERAVQHYDEMVVEADVHLSV------ARNPRVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT++ V+RA+E +E Y SIDLV++ + R+LR+ KE+ +DH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVANKLSRQLRRYKERHSDH 100
[40][TOP]
>UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YEZ8_MICAE
Length = 199
Score = 76.6 bits (187), Expect = 1e-12
Identities = 43/108 (39%), Positives = 65/108 (60%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+KL+IQG N+ +++A+ +VE K+ + ++ + + +VDV LS R P + E
Sbjct: 1 MKLLIQGNNIAVTEAIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHKAE 57
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 542
VT+Y V+RA+E +E Y SIDLVS I R+LRK KE+ DH H
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTH 104
[41][TOP]
>UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
str. MIT 9313 RepID=Q7V8W0_PROMM
Length = 195
Score = 75.9 bits (185), Expect = 2e-12
Identities = 43/107 (40%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+KL+I GRN+EL+ A++++ + K+ R IQ +V+E DV LS R P +
Sbjct: 1 MKLLIHGRNLELTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT++ V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH 100
[42][TOP]
>UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9303 RepID=A2CBL6_PROM3
Length = 195
Score = 75.9 bits (185), Expect = 2e-12
Identities = 43/107 (40%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+KL+I GRN+EL+ A++++ + K+ R IQ +V+E DV LS R P +
Sbjct: 1 MKLLIHGRNLELTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT++ V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH 100
[43][TOP]
>UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJ89_SYNPW
Length = 195
Score = 75.5 bits (184), Expect = 3e-12
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+KL+I GRN++++ A++ + E K+ R I LV+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLDVTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT++ V+RA+E +E Y SIDLV+S + R+LR+ K++ +DH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRFKDRHSDH 100
[44][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
Length = 224
Score = 75.5 bits (184), Expect = 3e-12
Identities = 42/104 (40%), Positives = 66/104 (63%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+KL+IQG+N+E++DA++ HV K+ + L+ +VDV LS + P+ + E
Sbjct: 1 MKLVIQGKNIEITDAIRSHVHQKIEKATAHFQTLINKVDVCLSVQNNPRI--APK-QTAE 57
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
VT++ + VVRAEE +E+ Y SID+V+ + R+LRK KEK D
Sbjct: 58 VTVFL-NNVVVRAEESSESLYASIDMVTDKLTRQLRKYKEKRRD 100
[45][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
Length = 213
Score = 75.5 bits (184), Expect = 3e-12
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TR 389
+KL+I G+N+E++DA++++V K+ + + + EVDV LS R PR +
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVSHFQNITNEVDVHLSV------ARNPRITTKQ 54
Query: 390 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 569
EVT++ V+RAEE +E Y SIDLV+ I R+LRK KE+ D + N++
Sbjct: 55 AAEVTIFA-NGSVIRAEESSENLYASIDLVADKIARQLRKYKERLQDQKTNAPPTNQVLV 113
Query: 570 SE 575
E
Sbjct: 114 PE 115
[46][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
Length = 215
Score = 75.1 bits (183), Expect = 4e-12
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TR 389
+KL+IQG+N+E++D++ ++V K+ + + L EVDV LS R PR +
Sbjct: 1 MKLVIQGKNIEITDSIHEYVNQKIEKAVNHFQQLTTEVDVHLSV------ARNPRINPKQ 54
Query: 390 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
EVT+Y V+RA+E +E Y SIDLV+ I R+LRK KEK
Sbjct: 55 TAEVTIYA-NGTVIRAQESSENLYASIDLVADKIARQLRKYKEK 97
[47][TOP]
>UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CWK2_SYNPV
Length = 195
Score = 75.1 bits (183), Expect = 4e-12
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+KL+I GRN++++ A++ + E K+ R I LV+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLDVTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT++ V+RA+E +E Y SIDLV+S + R+LR+ K++ +DH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRYKDRHSDH 100
[48][TOP]
>UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Cyanothece RepID=C7QW97_CYAP0
Length = 205
Score = 74.7 bits (182), Expect = 5e-12
Identities = 45/125 (36%), Positives = 73/125 (58%)
Frame = +3
Query: 201 DGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGP 380
D + S+KL+IQG N+++++++ +V++K+ + ++ + +VDV LS R
Sbjct: 2 DNGVLSMKLLIQGNNIDVTESIHDYVQEKLEKAVKHFQSITTKVDVHLSVARNA---RIT 58
Query: 381 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 560
+ EVT+Y V+RA+E +E+ Y SIDLVS I R+LRK KEK + K PN
Sbjct: 59 NKHKAEVTVYANGT-VIRAQEGSESLYASIDLVSDKIARQLRKYKEKL----NNKKAPNP 113
Query: 561 LKFSE 575
+K E
Sbjct: 114 VKVGE 118
[49][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2IVM1_NOSP7
Length = 214
Score = 73.9 bits (180), Expect = 8e-12
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 392
+KL+I +N+E++DA++++V K+ + + EVDV LS R PR TR+
Sbjct: 1 MKLVIHSKNIEITDAIREYVHQKIEKAASHFQSITNEVDVHLSV------ARNPRINTRQ 54
Query: 393 C-EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
EVT+Y V+RAEE +E Y SIDLV+ I R+LRK KE+ D
Sbjct: 55 AAEVTIYANG-SVIRAEESSENLYASIDLVADKIARQLRKYKERRQD 100
[50][TOP]
>UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JSS1_MICAN
Length = 199
Score = 73.9 bits (180), Expect = 8e-12
Identities = 42/105 (40%), Positives = 63/105 (60%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+KL+IQG N+ +++ + +VE K+ + ++ + + +VDV LS R P R E
Sbjct: 1 MKLLIQGNNIAVTEPIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHRAE 57
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
VT+Y V+RA+E +E Y SIDLVS I R+LRK KE+ DH
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERLVDH 101
[51][TOP]
>UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9301 RepID=A3PBB8_PROM0
Length = 194
Score = 73.6 bits (179), Expect = 1e-11
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRL 563
EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL 112
[52][TOP]
>UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str.
AS9601 RepID=A2BPM8_PROMS
Length = 194
Score = 73.6 bits (179), Expect = 1e-11
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRL 563
EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL 112
[53][TOP]
>UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured
Prochlorococcus marinus clone ASNC2259
RepID=Q1PKX8_PROMA
Length = 194
Score = 73.6 bits (179), Expect = 1e-11
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRL 563
EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL 112
[54][TOP]
>UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IMZ9_9CHRO
Length = 195
Score = 73.6 bits (179), Expect = 1e-11
Identities = 45/114 (39%), Positives = 70/114 (61%), Gaps = 2/114 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 392
+KL+I GRN+E++ A++++ E K+ R I +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLEVTPAIREYTETKLTRAITHFEGMVKEADVHLSV------ARNPRVPQQI 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP 554
EVT++ V+RA+EH++ Y SIDLV+S + R+L + KE+ H RH +GP
Sbjct: 55 AEVTMFANGT-VIRAQEHSDNLYASIDLVASKLTRQLNRYKERV--HERH-QGP 104
[55][TOP]
>UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH
5701 RepID=A3YVD7_9SYNE
Length = 195
Score = 73.6 bits (179), Expect = 1e-11
Identities = 40/107 (37%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+KL+I GRN++++ A++ + E K+GR I + LV+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLDVTPAIRDYTEAKLGRAINHYEGLVKEADVHLSV------ARNPRVAQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT++ V+RA+E +E Y SID+V+ + R+LR+ K++ ++H
Sbjct: 55 AEVTVFA-NGVVIRAQERSENLYASIDMVAGKLSRQLRRYKDRLSNH 100
[56][TOP]
>UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WZE1_CYAA5
Length = 201
Score = 73.2 bits (178), Expect = 1e-11
Identities = 41/106 (38%), Positives = 65/106 (61%)
Frame = +3
Query: 216 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 395
S+KL+IQG N+++++++ +V K+ + ++ + L +VDV LS + R +
Sbjct: 2 SMKLLIQGNNIDVTESINDYVTQKLEKAVKHYQTLTTKVDVHLSV---AKNARITNKHKA 58
Query: 396 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT+Y V+RA+E +E Y SIDLVS I R+LRK KEK +H
Sbjct: 59 EVTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNH 103
[57][TOP]
>UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307
RepID=A5GUZ2_SYNR3
Length = 187
Score = 73.2 bits (178), Expect = 1e-11
Identities = 40/110 (36%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+KL+I GRN+E++ A++ + E K+ R + + +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLEVTPALRDYTETKLSRAVSHFNGMVQEADVHLSV------ARNPRVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 542
EVTL+ V+RA+E ++ Y SIDLV+ + R+L++ K++ HG H
Sbjct: 55 AEVTLFASGT-VIRAQERSQNLYASIDLVAGKLARQLQRHKDRRQGHGHH 103
[58][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DKM6_THEEB
Length = 209
Score = 72.8 bits (177), Expect = 2e-11
Identities = 40/107 (37%), Positives = 63/107 (58%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
++L+I G+N++++D ++ ++ K+ R ++ EVDV LS P+ + E
Sbjct: 1 MRLVIHGKNIDITDGIRSYLNQKIERATSHFQNVINEVDVHLSVARNRS--TAPK-QTAE 57
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 539
VT++ V+RAEE +E Y SIDLV+ I RKLRK+KEK D R
Sbjct: 58 VTVFVNG-SVIRAEESSENLYASIDLVADKIARKLRKLKEKRQDKSR 103
[59][TOP]
>UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Prochlorococcus marinus str. NATL2A
RepID=Q46H11_PROMT
Length = 194
Score = 72.4 bits (176), Expect = 2e-11
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+KL+I GRN+EL+ +++ + + K+ + +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLELTQSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 542
EVT++ V+RA+E +E Y SIDLV++ + R+LRK KE+ H H
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVH 103
[60][TOP]
>UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. NATL1A RepID=A2C0K6_PROM1
Length = 194
Score = 72.0 bits (175), Expect = 3e-11
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+KL+I GRN+EL+ +++ + + K+ + +V+E DV LS R PR +
Sbjct: 1 MKLLIHGRNLELTPSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 542
EVT++ V+RA+E +E Y SIDLV++ + R+LRK KE+ H H
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVH 103
[61][TOP]
>UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus
marinus clone HF10-88F10 RepID=Q1PJW9_PROMA
Length = 194
Score = 71.6 bits (174), Expect = 4e-11
Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMK 548
EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H K
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNNQFK 107
[62][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
Length = 199
Score = 71.6 bits (174), Expect = 4e-11
Identities = 39/104 (37%), Positives = 64/104 (61%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+KL+IQG N+ +++A+ +V++K+ + ++ + +VDV LS + GR + E
Sbjct: 1 MKLLIQGNNITVTEAIHDYVQEKLEKAVKHFQAITTKVDVHLSV---AKNGRVQNKHKAE 57
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
VT+Y V+RA+E +E Y SIDLVS I R+LRK KE+ +
Sbjct: 58 VTVYANG-AVIRAQEGSENLYASIDLVSDKIARQLRKYKERRLE 100
[63][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
6803 RepID=LRTA_SYNY3
Length = 191
Score = 71.6 bits (174), Expect = 4e-11
Identities = 44/108 (40%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+KL+IQG N+ +++A+ +VE+KV R ++ L +VDV LS R + E
Sbjct: 1 MKLLIQGNNITVTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSV---ARNARITNKHKAE 57
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HG 536
VT+Y V+RA+E +E Y SIDLV+ I R+LRK KE+ D HG
Sbjct: 58 VTVYA-NGTVIRAQEGSENLYASIDLVADKIARQLRKYKERIQDKQHG 104
[64][TOP]
>UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus
RepID=Q7VDH9_PROMA
Length = 195
Score = 71.2 bits (173), Expect = 5e-11
Identities = 39/107 (36%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+K++I GRN+EL+ A++++ + K+ + I +V+E DV LS + PR +
Sbjct: 1 MKVLIHGRNLELTPALREYTKSKLEKAIHHFGDMVKEADVHLSV------AKNPRVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT++ V+RA+E ++ Y SIDLVS+ + R+LR+ KE+ +DH
Sbjct: 55 AEVTVFANGT-VIRAQERSQNLYASIDLVSNKLCRQLRRYKERHSDH 100
[65][TOP]
>UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U8F3_SYNPX
Length = 195
Score = 71.2 bits (173), Expect = 5e-11
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+KL+I GRN+E++ A++ + + K+ R VRE DV LS R PR +
Sbjct: 1 MKLLIHGRNLEITPALRDYTQTKLERATHHFGNAVREADVHLSV------ARNPRVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT++ V+RA+E +E Y SIDL +S + R+LR+ KE+ +DH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLAASKLARQLRRWKERHSDH 100
[66][TOP]
>UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7
Length = 199
Score = 71.2 bits (173), Expect = 5e-11
Identities = 40/108 (37%), Positives = 64/108 (59%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+KL+IQG N+ +++A+ +V+ K+ + ++ L +VDV LS + R + E
Sbjct: 1 MKLLIQGNNITVTEAIHDYVQQKLEKAVKHFQTLTTKVDVHLSV---AKNARIQNKHKAE 57
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 542
VT+Y V+RA+E +E Y SIDLVS I R+LRK KE++ + H
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERKLEQNAH 104
[67][TOP]
>UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT
Length = 199
Score = 71.2 bits (173), Expect = 5e-11
Identities = 39/105 (37%), Positives = 65/105 (61%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+KL+IQG N+++++++ +V+ K+ + ++ + +VDV LS + R + E
Sbjct: 1 MKLLIQGNNIDVTESINDYVKQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAE 57
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
VT+Y V+RA+E +E Y SIDLVS I R+LRK KEK ++H
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKISRQLRKYKEKVSNH 101
[68][TOP]
>UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str.
MIT 9215 RepID=A8G3B2_PROM2
Length = 194
Score = 70.5 bits (171), Expect = 9e-11
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKER 96
[69][TOP]
>UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT
9202 RepID=B9P0E9_PROMA
Length = 194
Score = 70.5 bits (171), Expect = 9e-11
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
EVT++ V+RAEE E Y SIDLVS+ + RKLRK KE+
Sbjct: 55 AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKER 96
[70][TOP]
>UniRef100_Q00W70 Chloroplast-specific ribosomal protein (ISS) n=1 Tax=Ostreococcus
tauri RepID=Q00W70_OSTTA
Length = 184
Score = 70.1 bits (170), Expect = 1e-10
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Frame = +3
Query: 213 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQK-HSYLVREVDVRLSTRGGGEFGRGPRTR 389
+ VK+++QG ++E++ A+ ++V K+GR S +REVDVR S RGG E +G
Sbjct: 48 TDVKMLVQGLHLEITPAIDEYVRSKIGRACSHVDSRDIREVDVRCSARGG-EGSKGGVEH 106
Query: 390 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RH 542
+ EVT+ R + A+ E Y +ID + I+ R +RK KEK G RH
Sbjct: 107 KTEVTVLMTRGPTLHADGVGENLYATIDQCADIVTRSIRKHKEKHGGKGARH 158
[71][TOP]
>UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9515 RepID=A2BV60_PROM5
Length = 194
Score = 69.7 bits (169), Expect = 2e-10
Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+K++I G+N+EL+ A+K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNIELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRLSYQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN 557
EVT++ ++RAEE E Y SIDLVS+ + RKLRK KE RH K N
Sbjct: 55 AEVTIFASGT-IIRAEEKTENLYSSIDLVSNKLCRKLRKYKE------RHYKNLN 102
[72][TOP]
>UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC
Length = 195
Score = 69.3 bits (168), Expect = 2e-10
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+KL+I GRN+E++ A++ + + K+ R VRE DV LS R PR +
Sbjct: 1 MKLLIHGRNLEITPALRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT++ V+RA+E +E Y SIDL + + R+LR+ KE+ +DH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDH 100
[73][TOP]
>UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110
RepID=A3IRI7_9CHRO
Length = 199
Score = 69.3 bits (168), Expect = 2e-10
Identities = 39/105 (37%), Positives = 63/105 (60%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+KL+IQG N+++++++ +V K+ + ++ + +VDV LS + R + E
Sbjct: 1 MKLLIQGNNIDVTESINDYVTQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAE 57
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
VT+Y V+RA+E +E Y SIDLVS I R+LRK KEK +H
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNH 101
[74][TOP]
>UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP
Length = 194
Score = 68.9 bits (167), Expect = 3e-10
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+K++I G+N+EL+ +K++ E K+ + + +V+E D+ LS + PR +
Sbjct: 1 MKILIHGKNLELTGPLKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPN 557
EVT++ ++RAEE E Y SIDLVS+ + RKLRK KE+ H +K N
Sbjct: 55 AEVTIFANGT-IIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHNKKLHNNLVKNKN 110
[75][TOP]
>UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9
Length = 195
Score = 68.9 bits (167), Expect = 3e-10
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+K++I GRN+E++ A++++ K+ R +RE DV LS R PR +
Sbjct: 1 MKVLIHGRNLEITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT++ V+RA+E +E Y SIDLV + R+LRK KE+ DH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH 100
[76][TOP]
>UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE
Length = 195
Score = 68.9 bits (167), Expect = 3e-10
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+K++I GRN+E++ A++++ K+ R +RE DV LS R PR +
Sbjct: 1 MKVLIHGRNLEITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT++ V+RA+E +E Y SIDLV + R+LRK KE+ DH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH 100
[77][TOP]
>UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9211 RepID=A9BE19_PROM4
Length = 197
Score = 68.6 bits (166), Expect = 3e-10
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 392
+KL+I GRN+EL+ +++++ + K+ + I +V+E DV LS + P +
Sbjct: 1 MKLLIHGRNLELTPSLREYTQSKLEKAIHHFDGIVQEADVHLS------IAKNPSVPQQI 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT++ V+RA+E ++ Y SIDLV++ + R+LRK KE+ +DH
Sbjct: 55 AEVTVFANGT-VIRAQERSQNLYASIDLVATKLCRQLRKYKERHSDH 100
[78][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
Length = 207
Score = 68.2 bits (165), Expect = 4e-10
Identities = 38/104 (36%), Positives = 61/104 (58%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+KL++QG N++++ A+ +V+ K+ + + + + E+DV LS + + + E
Sbjct: 1 MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAE 57
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
VT+Y V+RAEE E Y SIDLVS I R+L+K KEK D
Sbjct: 58 VTIYANGT-VIRAEECNENLYASIDLVSDKITRQLKKYKEKLRD 100
[79][TOP]
>UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Prochlorococcus marinus str. MIT 9312
RepID=Q31CD8_PROM9
Length = 194
Score = 68.2 bits (165), Expect = 4e-10
Identities = 38/101 (37%), Positives = 61/101 (60%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K++I G+N+EL+ A+K++ + K+ + + +V+E D+ LS E + E
Sbjct: 1 MKILIHGKNLELTGALKEYTQAKIEKATHHYKDIVKEADIHLSI----EKNPSVSLQTAE 56
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT++ V+RAEE E Y SIDLVS+ + RKLRK KE+
Sbjct: 57 VTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKER 96
[80][TOP]
>UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CH01_9SYNE
Length = 195
Score = 68.2 bits (165), Expect = 4e-10
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 392
+KL+I GRN+E++ +++ + + K+ R VRE DV LS R PR +
Sbjct: 1 MKLLIHGRNLEITPSLRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQT 54
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 533
EVT++ V+RA+E +E Y SIDL + + R+LR+ KE+ +DH
Sbjct: 55 AEVTVFANGT-VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDH 100
[81][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
PCC 6301 RepID=Q5N179_SYNP6
Length = 207
Score = 66.6 bits (161), Expect = 1e-09
Identities = 37/104 (35%), Positives = 61/104 (58%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+KL++QG N++++ A+ +V+ K+ + + + + E+DV LS + + + E
Sbjct: 1 MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAE 57
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
VT+Y V+RAEE E Y SIDLVS I R+L+K KE+ D
Sbjct: 58 VTIYANGT-VIRAEECNENLYASIDLVSDKITRQLKKYKEELRD 100
[82][TOP]
>UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002
RepID=LRTA_SYNP2
Length = 193
Score = 66.6 bits (161), Expect = 1e-09
Identities = 40/110 (36%), Positives = 61/110 (55%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+KL+IQG N+ +++++ +VE K+ + + +VDV LS R + E
Sbjct: 1 MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNA---RITDKHKAE 57
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK 548
VT+Y V+RA+E +E Y SIDLVS I R+LRK KEK H++
Sbjct: 58 VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQ 106
[83][TOP]
>UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
RepID=B0P2P9_9CLOT
Length = 179
Score = 64.3 bits (155), Expect = 6e-09
Identities = 39/106 (36%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Frame = +3
Query: 210 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVRE--VDVRLSTRGGGEFGRGPR 383
+ ++K II G+N+E+++ +K +E+K+GR+ YLV + V+V LS + G +
Sbjct: 1 MGAMKFIISGKNIEVTEGIKAAIEEKLGRL---DKYLVDDTIVNVTLSVQKGRQ------ 51
Query: 384 TRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
+ EVT+ K H ++RAEE +E Y SIDLV +I+R++R+ K +
Sbjct: 52 --KIEVTIPMKGH-IIRAEEGSEDMYVSIDLVVDVIERQIRRYKTR 94
[84][TOP]
>UniRef100_A4SAX9 Plastid-specific ribosomal protein 1 n=1 Tax=Ostreococcus
lucimarinus CCE9901 RepID=A4SAX9_OSTLU
Length = 132
Score = 64.3 bits (155), Expect = 6e-09
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +3
Query: 225 LIIQGRNMELSDAVKQHVEDKVGRVIQK-HSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 401
+++QG ++E++ A+ ++ K+G+ +REVDVR S RGG E RG + EV
Sbjct: 1 MLVQGLHLEITPAIDEYCRAKIGKACSHVDPREIREVDVRCSARGG-EDSRGGHEHKTEV 59
Query: 402 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RH 542
T+ R + A+ E Y +ID + I+ R +RK KEK + G RH
Sbjct: 60 TVLMTRGTTLHADGTGENLYATIDSCADIVTRAIRKHKEKHSGKGSRH 107
[85][TOP]
>UniRef100_C0PND1 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0PND1_MAIZE
Length = 325
Score = 63.9 bits (154), Expect = 8e-09
Identities = 43/131 (32%), Positives = 68/131 (51%)
Frame = -1
Query: 551 SLHVATMISLFFLDLSQLSLNDRGHQIYTPIGSFCMLLSPHHPMSLCIQSHLTSTRSRST 372
S+ A + L LDL++L+L+D G ++ +G +LL M+L + L + R +
Sbjct: 136 SVSAAAHLRLLLLDLAELALDDGGGEVDAGVGGLGVLLGAQDAMALGEEGDLAARRLGAP 195
Query: 371 AKLSSSASR*PDINFPD*VAMLLNYSSHFILHVLLHSITQLHISTLDD*FDGREWTIP*H 192
A+L+++ + PD VA+L + +H +L VLL + QL I L D RE T+P H
Sbjct: 196 AELAAARGE-AHVYLPDQVAVLGHRPTHLVLDVLLELLAQLRIPALHDEAHRRERTVPGH 254
Query: 191 GD*SGTAAFGG 159
G AA G
Sbjct: 255 PHRHGDAAAPG 265
[86][TOP]
>UniRef100_C8WMZ8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Eggerthella lenta DSM 2243 RepID=C8WMZ8_9ACTN
Length = 191
Score = 62.8 bits (151), Expect = 2e-08
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRGPRTRR 392
+ + + GR M ++DA++++ E+K+G ++ LV E+ + + PR
Sbjct: 1 MSITVTGRKMPVTDALREYAEEKIGNSMKVMDIDPLVAEIVLFVEKNPAN-----PRPAV 55
Query: 393 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
CEVTL TK H ++R EEH E Y +ID+ ++ + R+LRK K K D
Sbjct: 56 CEVTLRTKGH-IIRVEEHEEDMYAAIDVAAAKVVRQLRKYKTKVVD 100
[87][TOP]
>UniRef100_Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Deinococcus geothermalis DSM 11300
RepID=Q1IYK5_DEIGD
Length = 186
Score = 62.0 bits (149), Expect = 3e-08
Identities = 37/108 (34%), Positives = 62/108 (57%)
Frame = +3
Query: 231 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 410
+ GRN++++DA++ +VE+K+ R + + S + + V L+ R + GR R EV L
Sbjct: 6 LSGRNVDVTDAMRDYVEEKLTR-LDRFSDQITDARVVLTVRDVRDAGR---RNRVEVQLN 61
Query: 411 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP 554
+G++RAEEH Y +ID S +++R+LRK K K H + P
Sbjct: 62 VP-NGIIRAEEHHADMYAAIDRASDVLERQLRKFKTKYLRHRQEAAPP 108
[88][TOP]
>UniRef100_B1SBZ3 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius
subsp. infantarius ATCC BAA-102 RepID=B1SBZ3_9STRE
Length = 182
Score = 62.0 bits (149), Expect = 3e-08
Identities = 36/101 (35%), Positives = 65/101 (64%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K ++G N+E++DA++ +VE K+G+ I+K+ +E+D R++ + E +T + E
Sbjct: 2 IKYSVRGENIEVTDAIRNYVESKLGK-IEKYFNAEQELDARVNLKVYRE-----KTAKVE 55
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ +RAE+ ++ YGSIDLV+ I+R++RK K K
Sbjct: 56 VTILVNSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTK 95
[89][TOP]
>UniRef100_C1CWW9 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Deinococcus deserti VCD115 RepID=C1CWW9_DEIDV
Length = 188
Score = 61.2 bits (147), Expect = 5e-08
Identities = 34/97 (35%), Positives = 60/97 (61%)
Frame = +3
Query: 231 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 410
+ GRN+E+SDA++ +V++K+ R + +++ + + V L+ R + GR R EV L
Sbjct: 6 LSGRNVEVSDAMRDYVQEKLTR-LDRYNDQITDARVTLTVRDVRDAGR---RNRVEVQLN 61
Query: 411 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
+G++RAEEH Y +ID S +++R+LRK K +
Sbjct: 62 VP-NGIIRAEEHHSDMYAAIDKASDVLERQLRKFKTR 97
[90][TOP]
>UniRef100_C2D8Z3 Possible ribosome-associated inhibitor A n=1 Tax=Atopobium vaginae
DSM 15829 RepID=C2D8Z3_9ACTN
Length = 192
Score = 61.2 bits (147), Expect = 5e-08
Identities = 37/108 (34%), Positives = 54/108 (50%)
Frame = +3
Query: 231 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 410
I GR + +SDA++ HV+ KVG ++ DV L P + CEVT+Y
Sbjct: 6 ISGRKVSVSDALRDHVQHKVGDALKVFDITPMSCDVVLRVDKNHS---NPDRKTCEVTVY 62
Query: 411 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP 554
R+ VVR E +E Y +ID S + R+LRK K + D + + P
Sbjct: 63 V-RNNVVRVEASSEDMYAAIDAASDKVTRQLRKYKTRIIDRKQRSQAP 109
[91][TOP]
>UniRef100_C4V4X1 Ribosome-associated inhibitor A n=1 Tax=Selenomonas flueggei ATCC
43531 RepID=C4V4X1_9FIRM
Length = 181
Score = 59.3 bits (142), Expect = 2e-07
Identities = 37/97 (38%), Positives = 58/97 (59%)
Frame = +3
Query: 231 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 410
I+G+N+E++ A++ +VE +VG+ I K+ V E+ V LS G + + EVT
Sbjct: 6 IRGKNVEVTPALRDYVEKRVGK-ITKYFDNVGEIAVLLSVEG--------KHHKVEVTAP 56
Query: 411 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
R ++R EEH+E Y SIDLV ++R++RK K K
Sbjct: 57 VARGILLRGEEHSEDMYSSIDLVIEKLERQIRKQKTK 93
[92][TOP]
>UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
35704 RepID=B0NJJ3_EUBSP
Length = 179
Score = 59.3 bits (142), Expect = 2e-07
Identities = 38/116 (32%), Positives = 67/116 (57%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K II G+N++++ +K+ VE+K+G+ ++++ E+ V LS + ++ E
Sbjct: 1 MKFIIIGKNIDVTPGLKEAVENKLGK-LERYFTPDTEIHVTLSVQR--------ERQKIE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK 566
VT+ K G++R+E+ + Y SIDLV +I+R+LRK K K RH +G K
Sbjct: 52 VTIPVKG-GIIRSEQESSDMYVSIDLVEEVIERQLRKYKNKLI--ARHQEGSGNFK 104
[93][TOP]
>UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI
Length = 187
Score = 58.9 bits (141), Expect = 3e-07
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 392
++ I G+N+E+++ ++ +V K+ +V L VDV LS R PR R
Sbjct: 1 MQFAIHGKNIEVTEPIRDYVSSKLDKVFAHFDQLTMGVDVYLSV------ARNPRISRSH 54
Query: 393 -CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
EVT+ ++RAEE E Y SIDLV+ + R++RK KE+
Sbjct: 55 SAEVTVQASGT-IIRAEEETENLYASIDLVADKLHRQMRKYKER 97
[94][TOP]
>UniRef100_B4U4G1 Ribosomal subunit interface protein n=1 Tax=Streptococcus equi
subsp. zooepidemicus MGCS10565 RepID=B4U4G1_STREM
Length = 182
Score = 58.2 bits (139), Expect = 5e-07
Identities = 38/119 (31%), Positives = 70/119 (58%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K I+G N+E+++A++ +VE K+ + I+K+ + +E+D R++ + E +T + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVVEQEIDARVNLKVYRE-----KTAKVE 55
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 575
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R +++ SE
Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHREKMSTSQVFTSE 113
[95][TOP]
>UniRef100_C9L411 Ribosomal subunit interface protein n=1 Tax=Blautia hansenii DSM
20583 RepID=C9L411_RUMHA
Length = 176
Score = 58.2 bits (139), Expect = 5e-07
Identities = 37/104 (35%), Positives = 61/104 (58%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K II G+N+E++ ++ VEDK+G+ ++K+ E+ V LS ++ E
Sbjct: 1 MKFIISGKNIEVTQGLRSAVEDKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
VT+ K + ++R+E+ + Y SIDLV II+R+LRK K K D
Sbjct: 52 VTIPVKGN-IIRSEQVSSDMYVSIDLVEEIIERQLRKYKNKIID 94
[96][TOP]
>UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
27758 RepID=C0BAM2_9FIRM
Length = 189
Score = 58.2 bits (139), Expect = 5e-07
Identities = 36/104 (34%), Positives = 60/104 (57%)
Frame = +3
Query: 210 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 389
LS + II GRN++++ ++Q VE K+G++ Y E D+ ++ E +
Sbjct: 9 LSCMNFIISGRNIDITPGLRQAVEQKLGKL---EKYFTPETDIIVTLSVEKE------RQ 59
Query: 390 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
+ EVT+ K + ++R+E+ + Y SIDLV II+R+LRK K K
Sbjct: 60 KIEVTIPVKGN-IIRSEQESSDMYVSIDLVEEIIERQLRKYKTK 102
[97][TOP]
>UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
27756 RepID=A5KKP2_9FIRM
Length = 198
Score = 58.2 bits (139), Expect = 5e-07
Identities = 35/104 (33%), Positives = 62/104 (59%)
Frame = +3
Query: 210 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 389
L+S+ II G+N+E++ +K+ +E K+G+ ++++ E+ V LS G +
Sbjct: 11 LNSMNFIISGKNIEVTPGLKEAIEQKLGK-LERYFTPETEIIVTLSVEKGRQ-------- 61
Query: 390 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
+ EVT+ K ++R+E+ + Y SIDLV +I+R+LRK K K
Sbjct: 62 KIEVTIPVKG-SIIRSEQTSSDMYVSIDLVEEVIERQLRKYKNK 104
[98][TOP]
>UniRef100_C6SS06 Putative ribosome-associated protein n=2 Tax=Streptococcus mutans
RepID=C6SS06_STRMN
Length = 182
Score = 57.8 bits (138), Expect = 6e-07
Identities = 38/110 (34%), Positives = 65/110 (59%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K I+G N+E++DA++ +VE K+ + I+K+ +E+D R++ + E +T + E
Sbjct: 2 IKYSIRGENIEVTDAIRNYVESKLKK-IEKYFNAEQELDARINLKVYRE-----KTAKVE 55
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK 548
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R K
Sbjct: 56 VTI-PLAPVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHREKK 104
[99][TOP]
>UniRef100_Q9RVE7 Protein DR_1082 n=1 Tax=Deinococcus radiodurans RepID=UA82_DEIRA
Length = 191
Score = 57.4 bits (137), Expect = 8e-07
Identities = 34/106 (32%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Frame = +3
Query: 231 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 410
+ GRN+E+++ ++++VE+K+ R + +++ + + V L+ R + R R EV L
Sbjct: 6 LSGRNVEVTEPMREYVEEKLSR-LDRYTDQITDARVTLTVR---DVRNNERRNRVEVQLN 61
Query: 411 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE---KETDHGR 539
G++RAEEH Y +ID S +++R+LRK K K+ GR
Sbjct: 62 VPG-GIIRAEEHHADMYAAIDKASDVLERQLRKFKTRYMKQRQEGR 106
[100][TOP]
>UniRef100_Q3CZ63 Ribosomal subunit interface protein n=6 Tax=Streptococcus
agalactiae RepID=Q3CZ63_STRAG
Length = 184
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/101 (34%), Positives = 64/101 (63%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K I+G N+E+++A++++VE K+ +V +K+ +E+D R++ + E +T + E
Sbjct: 2 IKYSIRGENIEVTEAIREYVETKLSKV-EKYFNEAQELDTRVNLKVYRE-----KTAKVE 55
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ +RAE+ ++ YGSIDLV I+R++RK K K
Sbjct: 56 VTILIDSI-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTK 95
[101][TOP]
>UniRef100_C7N909 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Leptotrichia buccalis DSM 1135 RepID=C7N909_LEPBD
Length = 106
Score = 57.0 bits (136), Expect = 1e-06
Identities = 32/107 (29%), Positives = 60/107 (56%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K+II G+ ++++DA+K + E+K+ R I K+S + E+DV L+ G +
Sbjct: 1 MKIIISGKQLKITDAIKNYTEEKISR-ISKYSDAITEIDVVLTVEDTKSEGPVHKADGLV 59
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 539
TK ++ E + Y +ID +S ++R++RK KE++ DH +
Sbjct: 60 FASGTK----IKIEAENKDLYAAIDDLSDRLERQVRKYKERQKDHNK 102
[102][TOP]
>UniRef100_C0BYR7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
15053 RepID=C0BYR7_9CLOT
Length = 178
Score = 57.0 bits (136), Expect = 1e-06
Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K II G+N++++ +++ VE K+G+ ++K+ E+ V LS ++ E
Sbjct: 1 MKFIISGKNIDVTPGLRETVEHKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN-RLKFSE 575
VT+ K + ++R+E+ + Y SIDLV +I+R+LRK K K RH +G N R +F E
Sbjct: 52 VTIPVKGN-IIRSEQVSSDMYVSIDLVEEVIERQLRKYKNKLV--ARHQEGGNFRQEFFE 108
[103][TOP]
>UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
29176 RepID=B5CNW3_9FIRM
Length = 186
Score = 57.0 bits (136), Expect = 1e-06
Identities = 33/101 (32%), Positives = 61/101 (60%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+ II G+N+E++ +K +E K+G+ ++++ E++V LS G + + E
Sbjct: 1 MNFIISGKNIEVTPGLKDAIEQKLGK-LERYFTPETEINVTLSVEKGRQ--------KIE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ K + ++R+E+ ++ Y SIDLV +I+R+LRK K K
Sbjct: 52 VTIPVKGN-IIRSEQTSDNMYVSIDLVEEVIERQLRKYKNK 91
[104][TOP]
>UniRef100_C0M6F8 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Streptococcus equi subsp. equi 4047
RepID=C0M6F8_STRE4
Length = 182
Score = 56.6 bits (135), Expect = 1e-06
Identities = 38/119 (31%), Positives = 69/119 (57%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E +T + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVE 55
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 575
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R +++ SE
Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHREKMSTSQVFTSE 113
[105][TOP]
>UniRef100_B9DV32 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Streptococcus uberis 0140J RepID=B9DV32_STRU0
Length = 182
Score = 56.6 bits (135), Expect = 1e-06
Identities = 35/101 (34%), Positives = 63/101 (62%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K I+G N+E+++A++ +VE K+ + I+K+ E+D R++ + E +T + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVEAKLAK-IEKYFVEDSEIDTRVNLKVYRE-----KTAKVE 55
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ ++RAE+ ++ YGSIDLV I+R++RK K K
Sbjct: 56 VTIILGSM-ILRAEDVSQDMYGSIDLVVDKIERQIRKNKTK 95
[106][TOP]
>UniRef100_C4BVH6 Sigma 54 modulation protein; SSU ribosomal protein S30P n=1
Tax=Sebaldella termitidis ATCC 33386 RepID=C4BVH6_9FUSO
Length = 106
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+ +II GR +E+++ +K++ E+K+GRV K+ + E+DV LS G R +
Sbjct: 1 MNIIISGRRLEVTEPIKKYAEEKIGRV-NKYFDHITEIDVTLSVEKSKVEG---EIHRAD 56
Query: 399 VTLYTKRHGV-VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 539
V L+ +G+ ++ E + Y +ID + +++RK+R+ KEK DH +
Sbjct: 57 VLLF--GNGLKLKVEMEDKDLYAAIDKATDVLERKVRQHKEKLKDHNK 102
[107][TOP]
>UniRef100_C0MH43 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Steptococcus equi subsp. zooepidemicus H70
RepID=C0MH43_STRS7
Length = 182
Score = 56.2 bits (134), Expect = 2e-06
Identities = 38/119 (31%), Positives = 69/119 (57%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E +T + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVE 55
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 575
VT+ +RAE+ ++ YGSIDLV I+R++RK K K R +++ SE
Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHREKVSTSQVFTSE 113
[108][TOP]
>UniRef100_Q3DA79 Ribosomal subunit interface protein n=2 Tax=Streptococcus
agalactiae RepID=Q3DA79_STRAG
Length = 184
Score = 56.2 bits (134), Expect = 2e-06
Identities = 35/101 (34%), Positives = 64/101 (63%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K I+G N+E+++A++++VE K+ +V +K+ +E+D R++ + E +T + E
Sbjct: 2 IKYSIRGENIEVTEAIREYVETKLSKV-EKYFNEEQELDTRVNLKVYRE-----KTAKVE 55
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ +RAE+ ++ YGSIDLV I+R++RK K K
Sbjct: 56 VTILIDSI-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTK 95
[109][TOP]
>UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6FVY1_9CLOT
Length = 194
Score = 56.2 bits (134), Expect = 2e-06
Identities = 34/101 (33%), Positives = 58/101 (57%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+KL I G+ MEL+ +K ++E K+ ++ Y+ + DV+++ + GR + E
Sbjct: 9 MKLTISGKQMELTQGIKDNIESKLSKL---DKYISPDTDVKVTV--SAKKGR----HKIE 59
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ K V+RAEE E Y +IDLV ++ +L+K K+K
Sbjct: 60 VTIAPKNGHVIRAEESQENLYPAIDLVVDKLKIQLKKYKDK 100
[110][TOP]
>UniRef100_A5ZRI8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
29174 RepID=A5ZRI8_9FIRM
Length = 175
Score = 56.2 bits (134), Expect = 2e-06
Identities = 37/104 (35%), Positives = 60/104 (57%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K II G+N+ +S +K VEDK+G+ ++++ EV V LS ++ E
Sbjct: 1 MKFIISGKNITVSQGLKTAVEDKLGK-LERYFTPDTEVVVTLSVE--------KERQKIE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
VT+ K + ++R+E+ + Y SIDLV +I+R+LRK K K D
Sbjct: 52 VTIPMKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVD 94
[111][TOP]
>UniRef100_A6WEN5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Kineococcus radiotolerans SRS30216
RepID=A6WEN5_KINRD
Length = 256
Score = 55.5 bits (132), Expect = 3e-06
Identities = 32/109 (29%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+++++ GR+ ++ + ++HVEDK+ +V+Q + + +DV LS + + R E
Sbjct: 1 MEVVVTGRHTDVKERFRRHVEDKLEKVVQ-FAPRAQRIDVELSHENNRR--QASSSERVE 57
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE-KETDHGRH 542
+T+ K VVRAE A+ Y ++DL ++ + +LR+ ++ ++ HGRH
Sbjct: 58 ITVRDK-GPVVRAEACADDPYAALDLATTKLYERLRRSRDRRKVHHGRH 105
[112][TOP]
>UniRef100_C2KX79 Ribosome-associated inhibitor A n=1 Tax=Oribacterium sinus F0268
RepID=C2KX79_9FIRM
Length = 176
Score = 55.5 bits (132), Expect = 3e-06
Identities = 37/101 (36%), Positives = 56/101 (55%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K+ I GRN+ L+D +K VE K+G+ + K +V LST+ ++ E
Sbjct: 1 MKITITGRNLSLTDGLKNGVEKKLGK-LDKFFQAETPCNVTLSTQKD--------MQKIE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ K V+RAEE Y SIDLV +++R++RK K K
Sbjct: 52 VTIPVKG-SVIRAEEATPDMYQSIDLVVDVLERQIRKYKNK 91
[113][TOP]
>UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
ATCC 43243 RepID=B7AN97_9BACE
Length = 179
Score = 55.5 bits (132), Expect = 3e-06
Identities = 35/104 (33%), Positives = 60/104 (57%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
++ +I GRN+E++D +K+ VE+K+G+ + + EV V LS ++ E
Sbjct: 4 MRFVIVGRNIEVTDGLKEAVEEKLGK-LDRFFAPDTEVKVTLSVE--------KERQKIE 54
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
VT+ K ++R+E+ + Y SIDLV +I+R+L+K K K D
Sbjct: 55 VTIPVK-GSIIRSEQVSNDMYVSIDLVEEVIERQLKKYKNKLID 97
[114][TOP]
>UniRef100_B0MGZ9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
14662 RepID=B0MGZ9_9FIRM
Length = 176
Score = 55.5 bits (132), Expect = 3e-06
Identities = 31/101 (30%), Positives = 61/101 (60%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+ II G+N+E+++ ++ +E+K+GR+ YL ++D+ ++ E ++ E
Sbjct: 1 MNFIISGKNIEVTEGIRAAIEEKLGRL---DKYLTDDIDIIVTLSVQKE------RQKIE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ K H ++RAE+ + Y SIDLV I++R++R+ K +
Sbjct: 52 VTIPMKGH-IIRAEQDSADMYVSIDLVIDILERQIRRYKTR 91
[115][TOP]
>UniRef100_B0G387 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC
27755 RepID=B0G387_9FIRM
Length = 177
Score = 55.5 bits (132), Expect = 3e-06
Identities = 34/101 (33%), Positives = 61/101 (60%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K II G+N++++ +K VE K+G+ +Q++ E+ V LS + ++ E
Sbjct: 1 MKFIIIGKNIDVTPGLKDAVESKLGK-LQRYFTPDTEIHVTLSVQ--------KEHQKIE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ K + ++R+E+ ++ Y SIDLV +I+R+LRK K K
Sbjct: 52 VTIPVKGN-IIRSEQESDDMYVSIDLVEEVIERQLRKYKNK 91
[116][TOP]
>UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
13814 RepID=A6BHR0_9FIRM
Length = 178
Score = 55.5 bits (132), Expect = 3e-06
Identities = 35/101 (34%), Positives = 61/101 (60%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K II G+N++++ +++ VE K+G+ + ++ E+ V LS + G + + E
Sbjct: 1 MKFIIIGKNIDVTPGLREAVESKLGK-LGRYFTPNTEIHVTLSVQKGHQ--------KIE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ K G+VR+E+ + Y SIDLV +I+R+LRK K K
Sbjct: 52 VTIPVKG-GLVRSEQESSDMYVSIDLVEEVIERQLRKYKNK 91
[117][TOP]
>UniRef100_A5Z528 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
ATCC 27560 RepID=A5Z528_9FIRM
Length = 179
Score = 55.5 bits (132), Expect = 3e-06
Identities = 36/110 (32%), Positives = 62/110 (56%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K+ I G+N+E+++ ++ VE+K+G+ + K+ VDV LS ++ E
Sbjct: 1 MKIKIFGKNIEVTEGIRSAVEEKIGK-LDKYFAEETRVDVTLSVN--------KNEQKVE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK 548
VT+ K ++RAEE ++ Y SID+V I+R+L K K K D + +K
Sbjct: 52 VTIPVKGR-IIRAEEISDDMYVSIDMVEETIERQLVKYKNKIIDKKKSIK 100
[118][TOP]
>UniRef100_UPI00004C2450 COG1544: Ribosome-associated protein Y (PSrp-1) n=1
Tax=Streptococcus pyogenes M49 591 RepID=UPI00004C2450
Length = 182
Score = 55.1 bits (131), Expect = 4e-06
Identities = 35/101 (34%), Positives = 63/101 (62%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E R+ + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ +RAE+ ++ YGSIDLV I+R++RK K K
Sbjct: 56 VTIPLDSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTK 95
[119][TOP]
>UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens
ATCC 27750 RepID=C4Z2Z4_EUBE2
Length = 175
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/104 (32%), Positives = 61/104 (58%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
++ II GRN+++++ +K VE+K+G+ + + EV+V LS ++ E
Sbjct: 1 MRFIITGRNIDITEGLKSAVEEKLGK-LDRFFAPETEVNVTLSVE--------KERQKIE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
VT+ K + ++R+E+ + Y SIDLV +I+R+L+K K K D
Sbjct: 52 VTIPVKGN-IIRSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVD 94
[120][TOP]
>UniRef100_C9MUU2 Ribosomal subunit interface protein n=1 Tax=Leptotrichia hofstadii
F0254 RepID=C9MUU2_9FUSO
Length = 106
Score = 55.1 bits (131), Expect = 4e-06
Identities = 32/107 (29%), Positives = 60/107 (56%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K+II G+ ++++DA+K + E+KV + I K+S + E+DV L+ G +
Sbjct: 1 MKIIISGKQLKITDAIKNYTEEKVSK-ISKYSDAITEIDVVLTVEDTKSEGPVHKADGLV 59
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 539
TK ++ E + Y +ID +S ++R++RK KEK+ D+ +
Sbjct: 60 YASGTK----IKIEAENKDLYAAIDDLSDRLERQVRKYKEKQKDYNK 102
[121][TOP]
>UniRef100_C7ML59 Ribosomal subunit interface protein n=1 Tax=Cryptobacterium curtum
DSM 15641 RepID=C7ML59_CRYCD
Length = 188
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRG-PRTR 389
+++ + GR M ++DA+K + E+K+G ++ L+ EV + + E R R
Sbjct: 1 MEISVTGRKMPVTDALKSYAEEKIGNSMKVMDIDPLIAEVILHV------EQNRAIARPA 54
Query: 390 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
CEVT+ K H ++R EEH E Y +ID+ ++ + R+LRK K +
Sbjct: 55 ICEVTMTAKGH-IIRVEEHEEDMYAAIDVAAAKVLRQLRKFKTR 97
[122][TOP]
>UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
49176 RepID=C4G2X0_ABIDE
Length = 175
Score = 55.1 bits (131), Expect = 4e-06
Identities = 32/104 (30%), Positives = 60/104 (57%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K II GR ++D ++ +E+K+G++ Y + +V ++ + + ++ E
Sbjct: 1 MKYIINGRGTNVTDGLRNAIEEKLGKL---EHYFTPDTEVHVTLKVEKD------RQKVE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
VT+ K H ++RAE+ ++ Y SIDL+ II+R+LR+ K K D
Sbjct: 52 VTVPVKGH-IIRAEQVSDDMYVSIDLIEDIIERQLRRYKTKIVD 94
[123][TOP]
>UniRef100_A8U6N5 Ribosomal subunit interface protein n=1 Tax=Carnobacterium sp. AT7
RepID=A8U6N5_9LACT
Length = 180
Score = 55.1 bits (131), Expect = 4e-06
Identities = 35/100 (35%), Positives = 61/100 (61%)
Frame = +3
Query: 222 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 401
K ++G N+E++ A++ +VE KVG+V +K+ V E ++ + + +T + EV
Sbjct: 3 KYNVRGENIEVTAAIRSYVEKKVGKV-EKYFNDVPEATAHVNLKTYSD-----KTAKVEV 56
Query: 402 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
T+ + V+RAEE + YGS+DLVS ++R++RK K K
Sbjct: 57 TIPLP-YLVLRAEETSPDLYGSVDLVSDKLERQMRKYKTK 95
[124][TOP]
>UniRef100_Q5XAQ7 Ribosome-associated factor Y n=10 Tax=Streptococcus pyogenes
RepID=RAFY_STRP6
Length = 182
Score = 55.1 bits (131), Expect = 4e-06
Identities = 35/101 (34%), Positives = 63/101 (62%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E R+ + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ +RAE+ ++ YGSIDLV I+R++RK K K
Sbjct: 56 VTIPLDSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTK 95
[125][TOP]
>UniRef100_C8W7H2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Atopobium parvulum DSM 20469 RepID=C8W7H2_ATOPD
Length = 196
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/119 (27%), Positives = 57/119 (47%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
V + I GR + +S+A++ HV+ K+G ++ DV L P + E
Sbjct: 2 VDIKISGRKVSISEALRAHVDQKIGDALKVFDITPMSCDVVLRVDKNPS---NPDRKTTE 58
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 575
VT++ R+ VVR ++ Y +ID + + R+LRK K K + HMK + ++
Sbjct: 59 VTVFV-RNNVVRVTASSDDMYAAIDEAADKVSRQLRKYKTKVVERRHHMKSERGIALTQ 116
[126][TOP]
>UniRef100_C0VBX3 SSU ribosomal protein S30P n=1 Tax=Xylanimonas cellulosilytica DSM
15894 RepID=C0VBX3_9MICO
Length = 216
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/107 (30%), Positives = 62/107 (57%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+++++ GR+ ++ + ++HVEDK+ +V Q S LV+ VDV ++ + R E
Sbjct: 1 MEIVVVGRHTDVPERFRRHVEDKLTKVTQL-SPLVQRVDVEVTHENNPKLS--DVRERVE 57
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 539
+T+ K V+RAE A+ YG++DL + +LR+ +++ DH R
Sbjct: 58 LTVRAKGP-VIRAEAAADDRYGALDLAIDKLIERLRRSRDRRKDHRR 103
[127][TOP]
>UniRef100_B4VG26 Ribosomal subunit interface protein n=1 Tax=Streptomyces sp. Mg1
RepID=B4VG26_9ACTO
Length = 250
Score = 54.7 bits (130), Expect = 5e-06
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Frame = +3
Query: 168 RRGTAS-ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVG-RVIQKHSYLVREVDVR 341
R+G AS + S+ G V ++++GR E+ + ++HV +K+ IQK V +DV
Sbjct: 2 RKGDASPLGRSYPGTEFCVDIVVKGRKTEVPERFRKHVAEKLNPERIQKLDAKVISLDVE 61
Query: 342 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
+S + R+ R E+TL++ R V+RAE A Y ++DL ++ +LRK +K
Sbjct: 62 VSKEHNPR--QADRSDRVEITLHS-RGPVIRAEAAAADAYAALDLAQDKLEARLRKQHDK 118
Query: 522 ETDHGRHMKGPNRLKFSE 575
+G RL +E
Sbjct: 119 RYTR----RGNGRLSAAE 132
[128][TOP]
>UniRef100_A3S9C1 Ribosomal subunit interface protein, putative n=2 Tax=Sulfitobacter
RepID=A3S9C1_9RHOB
Length = 188
Score = 54.7 bits (130), Expect = 5e-06
Identities = 31/111 (27%), Positives = 58/111 (52%)
Frame = +3
Query: 231 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 410
I G+ +++ +A++ HV+ ++G +QK++ + +V S + G EF CE T++
Sbjct: 5 ISGKQIDIGEALQTHVKTELGEAVQKYAERPTDANVIFS-KSGHEFV-------CETTVH 56
Query: 411 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 563
A+ HA YGS D ++ ++++LR+ K + DH R P L
Sbjct: 57 LSTGLTASAKAHATDIYGSFDSCAAKMEKQLRRYKRRLKDHHRERAQPVEL 107
[129][TOP]
>UniRef100_C5WIE9 Ribosome-associated factor Y n=1 Tax=Streptococcus dysgalactiae
subsp. equisimilis GGS_124 RepID=C5WIE9_STRDG
Length = 182
Score = 54.3 bits (129), Expect = 7e-06
Identities = 34/101 (33%), Positives = 63/101 (62%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K I+G N+E+++A++ +VE K+ + I+K+ +E+D R++ + E ++ + E
Sbjct: 2 IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KSSKVE 55
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ +RAE+ ++ YGSIDLV I+R++RK K K
Sbjct: 56 VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTK 95
[130][TOP]
>UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale
ATCC 33656 RepID=C4ZI34_EUBR3
Length = 175
Score = 54.3 bits (129), Expect = 7e-06
Identities = 35/101 (34%), Positives = 60/101 (59%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+++ I G+N+EL++ +KQ VE+K+ + ++K +V V LS + + E
Sbjct: 1 MRITISGKNIELTEGLKQAVEEKLSK-LEKFFKPDTDVYVTLSVEKDRQ--------KIE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ K H V+R+E+ + Y SIDLV +I+R+LRK + K
Sbjct: 52 VTIPAKGH-VIRSEQVSNDMYVSIDLVEEVIERQLRKYRTK 91
[131][TOP]
>UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH
Length = 178
Score = 54.3 bits (129), Expect = 7e-06
Identities = 33/104 (31%), Positives = 61/104 (58%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
++ II G+N+++++ +K + +K+G+ ++K+ E+ V LS + + E
Sbjct: 1 MRYIISGKNIDVTEGLKSAIYEKIGK-LEKYFNPEAEIHVTLSVEKDRQ--------KIE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
VT+ K + +VRAE+ + Y SIDLV +I+R+L+K K K D
Sbjct: 52 VTIPMKGN-IVRAEQVSNDMYASIDLVEEVIERQLKKYKSKLKD 94
[132][TOP]
>UniRef100_A3CPW1 30S ribosomal interface protein S30EA, putative n=1
Tax=Streptococcus sanguinis SK36 RepID=A3CPW1_STRSV
Length = 180
Score = 54.3 bits (129), Expect = 7e-06
Identities = 37/115 (32%), Positives = 68/115 (59%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K I+G N+E++DA++ +V K+ + I+K+ +E+D R++ + E +T + E
Sbjct: 2 LKYSIRGENLEVTDALRDYVVSKLEK-IEKYFQAEQELDARVNLKVYRE-----KTAKVE 55
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 563
VT+ +RAE+ ++ YGSIDLV+ I+R++RK K K R+ ++L
Sbjct: 56 VTIPLGSI-TLRAEDISQDMYGSIDLVTDKIERQIRKNKTKIERKNRNKVATSQL 109
[133][TOP]
>UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F5F53
Length = 183
Score = 53.9 bits (128), Expect = 9e-06
Identities = 32/110 (29%), Positives = 63/110 (57%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+ +II G+ +EL+DA+K +E K+ ++ +Y+ + DV+++ R R ++ E
Sbjct: 1 MNIIISGKQIELTDAIKNKIESKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK 548
VT+ T ++RAE+ E Y +ID+V + ++L+K K++ D + K
Sbjct: 52 VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNK 101
[134][TOP]
>UniRef100_C2LQ50 Ribosomal subunit interface protein, ribosomal protein S30AE family
n=1 Tax=Streptococcus salivarius SK126
RepID=C2LQ50_STRSL
Length = 182
Score = 53.9 bits (128), Expect = 9e-06
Identities = 35/101 (34%), Positives = 64/101 (63%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+K I+G N+E+++A++ +VE K+ +V +K+ +E++ R++ + E +T + E
Sbjct: 2 IKYSIRGENIEVTEALRDYVESKLSKV-EKYFNEDQELNARVNLKVYRE-----KTAKVE 55
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 521
VT+ T +RAE+ ++ YGSIDLV I+R++RK K K
Sbjct: 56 VTIPTGSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTK 95
[135][TOP]
>UniRef100_C0U8U2 SSU ribosomal protein S30P n=1 Tax=Geodermatophilus obscurus DSM
43160 RepID=C0U8U2_9ACTO
Length = 228
Score = 53.9 bits (128), Expect = 9e-06
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRC 395
++++++GRN+E+ + +QHVEDKVG+ + L + +DV L + + +R
Sbjct: 1 MEIVVRGRNVEVPEHYRQHVEDKVGQSDRFDGKLKILRIDVELFHEKNPR--QSGKCQRV 58
Query: 396 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE-KETDHGR 539
E+TL K VVRAE A Y ++DL + + +LRK + + HGR
Sbjct: 59 EITLRGK-GPVVRAEAAAPDFYAALDLAAGKLDHRLRKAADRRRVHHGR 106
[136][TOP]
>UniRef100_C0CJV5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
DSM 10507 RepID=C0CJV5_9FIRM
Length = 175
Score = 53.9 bits (128), Expect = 9e-06
Identities = 34/104 (32%), Positives = 60/104 (57%)
Frame = +3
Query: 219 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 398
+ II G+N+ ++D ++ VEDK+G+ ++++ E+ V LS + + E
Sbjct: 1 MNFIISGKNLTVTDGLRTAVEDKLGK-LERYFTPDTEIIVTLSVEKSRQ--------KIE 51
Query: 399 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 530
VT+ K + ++R+E+ + Y SIDLV +I+R+LRK K K D
Sbjct: 52 VTIPVKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKTKIVD 94