[UP]
[1][TOP] >UniRef100_B7FGH5 Putative uncharacterized protein n=1 Tax=Medicago truncatula RepID=B7FGH5_MEDTR Length = 116 Score = 146 bits (368), Expect = 1e-33 Identities = 71/71 (100%), Positives = 71/71 (100%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF Sbjct: 46 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 105 Query: 402 EAELLKFSKDY 370 EAELLKFSKDY Sbjct: 106 EAELLKFSKDY 116 [2][TOP] >UniRef100_C6SW39 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6SW39_SOYBN Length = 116 Score = 136 bits (342), Expect = 1e-30 Identities = 63/71 (88%), Positives = 69/71 (97%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LRMQLH+DPNVLFAGYKLPHPLQYKII+RIHTTSQSSPMQAYNQS+NDLD+ELD LKS F Sbjct: 46 LRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAF 105 Query: 402 EAELLKFSKDY 370 EAE+LKFS+DY Sbjct: 106 EAEMLKFSRDY 116 [3][TOP] >UniRef100_A7P675 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7P675_VITVI Length = 116 Score = 125 bits (315), Expect = 2e-27 Identities = 60/71 (84%), Positives = 65/71 (91%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LRMQLH+D NVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQ+INDLDKELD LK+ F Sbjct: 46 LRMQLHRDENVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAF 105 Query: 402 EAELLKFSKDY 370 E EL K S++Y Sbjct: 106 EVELAKHSREY 116 [4][TOP] >UniRef100_A5BQX0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BQX0_VITVI Length = 129 Score = 125 bits (315), Expect = 2e-27 Identities = 60/71 (84%), Positives = 65/71 (91%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LRMQLH+D NVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQ+INDLDKELD LK+ F Sbjct: 59 LRMQLHRDENVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAF 118 Query: 402 EAELLKFSKDY 370 E EL K S++Y Sbjct: 119 EVELAKHSREY 129 [5][TOP] >UniRef100_Q38859 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Arabidopsis thaliana RepID=RPB11_ARATH Length = 116 Score = 120 bits (301), Expect = 8e-26 Identities = 56/71 (78%), Positives = 65/71 (91%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +RMQLH+D NVLFAGY+LPHPL+YKII+RIHTTSQSSPMQAYNQ+INDLDKELD LK+ F Sbjct: 46 VRMQLHRDENVLFAGYQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQF 105 Query: 402 EAELLKFSKDY 370 EAE+ KFS + Sbjct: 106 EAEVAKFSNQF 116 [6][TOP] >UniRef100_A9PCB4 Predicted protein n=1 Tax=Populus trichocarpa RepID=A9PCB4_POPTR Length = 116 Score = 118 bits (296), Expect = 3e-25 Identities = 56/64 (87%), Positives = 61/64 (95%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LRMQLH+D NVLFAGYKLPHPL+YKII+RIHTTSQSSPMQAYNQ+INDLDKELD LK+ F Sbjct: 46 LRMQLHRDDNVLFAGYKLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAF 105 Query: 402 EAEL 391 EAEL Sbjct: 106 EAEL 109 [7][TOP] >UniRef100_B9RVP3 DNA-directed RNA polymerase II 13.6 kD polypeptide, putative n=1 Tax=Ricinus communis RepID=B9RVP3_RICCO Length = 156 Score = 115 bits (287), Expect = 3e-24 Identities = 54/61 (88%), Positives = 58/61 (95%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LRMQLH+D NVLFAGY+LPHPLQYKII+RIHTTSQSSPMQAYNQ+INDLDKELD LKS F Sbjct: 46 LRMQLHRDENVLFAGYRLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSAF 105 Query: 402 E 400 E Sbjct: 106 E 106 [8][TOP] >UniRef100_C5YC44 Putative uncharacterized protein Sb06g001360 n=1 Tax=Sorghum bicolor RepID=C5YC44_SORBI Length = 117 Score = 112 bits (281), Expect = 2e-23 Identities = 52/67 (77%), Positives = 60/67 (89%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +RMQLH+DPNVLFAGYKLPHPLQYKII+RIHTTSQSSP QAY+Q++NDLDKEL+ LK F Sbjct: 46 VRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPTQAYSQAVNDLDKELEYLKQAF 105 Query: 402 EAELLKF 382 E E +F Sbjct: 106 EDEKNRF 112 [9][TOP] >UniRef100_B4FJS1 DNA-directed RNA polymerase II subunit J n=1 Tax=Zea mays RepID=B4FJS1_MAIZE Length = 120 Score = 112 bits (281), Expect = 2e-23 Identities = 53/63 (84%), Positives = 57/63 (90%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LRMQLH+DPNVLFAGYKLPHPLQYKII+RIHTTSQSSP QAY Q+INDLDKEL+ LK F Sbjct: 46 LRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPTQAYTQAINDLDKELEYLKQAF 105 Query: 402 EAE 394 E E Sbjct: 106 EDE 108 [10][TOP] >UniRef100_A9NN58 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=A9NN58_PICSI Length = 120 Score = 111 bits (277), Expect = 5e-23 Identities = 51/70 (72%), Positives = 61/70 (87%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +RMQLH+DPNVLFAGYKLPHPLQYKI++RI TTSQSSPMQAYN +I+DLDKELD LK F Sbjct: 46 VRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTTSQSSPMQAYNLAIDDLDKELDHLKRSF 105 Query: 402 EAELLKFSKD 373 E E+++ + Sbjct: 106 EDEMVRLQSE 115 [11][TOP] >UniRef100_C5X6I3 Putative uncharacterized protein Sb02g000210 n=1 Tax=Sorghum bicolor RepID=C5X6I3_SORBI Length = 120 Score = 110 bits (276), Expect = 6e-23 Identities = 51/69 (73%), Positives = 60/69 (86%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LRMQLH+DPNVLFAGYKLPHPLQYKII+RIHT SQSSP QAY+Q++NDLDKEL+ LK F Sbjct: 46 LRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTMSQSSPTQAYSQAVNDLDKELEYLKQAF 105 Query: 402 EAELLKFSK 376 E E ++ + Sbjct: 106 EDEKNRYEE 114 [12][TOP] >UniRef100_Q6ZA50 Os07g0172500 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6ZA50_ORYSJ Length = 120 Score = 110 bits (275), Expect = 8e-23 Identities = 48/69 (69%), Positives = 60/69 (86%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LRMQLH+DPNVLFAGYKLPHPLQYKI++R+HT +QS+P QAY Q+INDLDKEL+ LK F Sbjct: 46 LRMQLHRDPNVLFAGYKLPHPLQYKILVRVHTANQSTPTQAYTQAINDLDKELENLKQAF 105 Query: 402 EAELLKFSK 376 E E +++ + Sbjct: 106 EDEKIRYEE 114 [13][TOP] >UniRef100_A3BH10 Putative uncharacterized protein n=2 Tax=Oryza sativa RepID=A3BH10_ORYSJ Length = 135 Score = 110 bits (275), Expect = 8e-23 Identities = 48/69 (69%), Positives = 60/69 (86%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LRMQLH+DPNVLFAGYKLPHPLQYKI++R+HT +QS+P QAY Q+INDLDKEL+ LK F Sbjct: 61 LRMQLHRDPNVLFAGYKLPHPLQYKILVRVHTANQSTPTQAYTQAINDLDKELENLKQAF 120 Query: 402 EAELLKFSK 376 E E +++ + Sbjct: 121 EDEKIRYEE 129 [14][TOP] >UniRef100_A9RYQ0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RYQ0_PHYPA Length = 137 Score = 103 bits (258), Expect = 8e-21 Identities = 48/79 (60%), Positives = 61/79 (77%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LRMQLH+DP+VLFAGYKLPHPLQY+++++I T SQSSPMQAYN +I DL KELD LK+ F Sbjct: 46 LRMQLHRDPSVLFAGYKLPHPLQYRVVVKIQTNSQSSPMQAYNLAITDLTKELDHLKATF 105 Query: 402 EAELLKFSKDY*LTTTVKM 346 E L++ K T + + Sbjct: 106 EVNLMQILKVLVFVTEISL 124 [15][TOP] >UniRef100_A9RFS8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RFS8_PHYPA Length = 117 Score = 102 bits (253), Expect = 3e-20 Identities = 47/71 (66%), Positives = 59/71 (83%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +RMQLH+DP+VLFAGY+LPHPLQY+++++I TTSQSSPMQAYN +I DL KELD LK+ F Sbjct: 46 IRMQLHRDPSVLFAGYRLPHPLQYRLVVKIQTTSQSSPMQAYNLAITDLIKELDHLKAVF 105 Query: 402 EAELLKFSKDY 370 E E + DY Sbjct: 106 EHETSQKQADY 116 [16][TOP] >UniRef100_C6T5N7 Putative uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=C6T5N7_SOYBN Length = 130 Score = 81.3 bits (199), Expect = 5e-14 Identities = 38/54 (70%), Positives = 45/54 (83%) Frame = +1 Query: 421 IKFLVQIVDRLIICLHW*RLAGSVYPNNNFVLKRMRKFVSSK*HIGVFVKLHAQ 582 IKF VQI++RL+ICLHW RL VYP++NFVLKR+RK VS K HIGV VKLHA+ Sbjct: 2 IKFPVQIINRLVICLHWRRLTSGVYPDDNFVLKRVRKLVSGKQHIGVSVKLHAE 55 [17][TOP] >UniRef100_C6TI25 Putative uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=C6TI25_SOYBN Length = 128 Score = 79.7 bits (195), Expect = 2e-13 Identities = 38/54 (70%), Positives = 44/54 (81%) Frame = +1 Query: 421 IKFLVQIVDRLIICLHW*RLAGSVYPNNNFVLKRMRKFVSSK*HIGVFVKLHAQ 582 IKF VQI++RL+ICLHW RL VYP+NNFVLKRMRK VS K IGV V+LHA+ Sbjct: 2 IKFPVQIINRLVICLHWRRLTSGVYPDNNFVLKRMRKLVSGKQDIGVSVQLHAE 55 [18][TOP] >UniRef100_UPI0000EB32C9 UPI0000EB32C9 related cluster n=1 Tax=Canis lupus familiaris RepID=UPI0000EB32C9 Length = 129 Score = 75.5 bits (184), Expect = 3e-12 Identities = 35/66 (53%), Positives = 46/66 (69%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 59 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 118 Query: 402 EAELLK 385 L+K Sbjct: 119 RPSLVK 124 [19][TOP] >UniRef100_C1EAB7 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299 RepID=C1EAB7_9CHLO Length = 101 Score = 74.7 bits (182), Expect = 5e-12 Identities = 31/56 (55%), Positives = 44/56 (78%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTL 415 +RMQLH+DPNV+FAGY++PHP +I+I++HT SSPMQA +S+N L +E+ L Sbjct: 46 VRMQLHRDPNVVFAGYQVPHPSDNRIVIKVHTNKNSSPMQAMTESVNCLSEEVSRL 101 [20][TOP] >UniRef100_Q16IF1 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Aedes aegypti RepID=Q16IF1_AEDAE Length = 117 Score = 74.3 bits (181), Expect = 6e-12 Identities = 35/61 (57%), Positives = 44/61 (72%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDPNVLFAGYKLPHPL++K +IRI TTS SP +A+ +I DL EL + F Sbjct: 46 IRNQLLKDPNVLFAGYKLPHPLEHKFVIRIQTTSDYSPQEAFMNAITDLLSELSLFEERF 105 Query: 402 E 400 + Sbjct: 106 K 106 [21][TOP] >UniRef100_Q7PVQ9 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Anopheles gambiae RepID=RPB11_ANOGA Length = 117 Score = 74.3 bits (181), Expect = 6e-12 Identities = 37/70 (52%), Positives = 49/70 (70%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDPNVLFAGYKLPHPL++K ++RI TTS+ SP +A+ +I DL EL + F Sbjct: 46 IRNQLLKDPNVLFAGYKLPHPLEHKFVLRIQTTSEYSPHEAFMNAITDLLSELSLFEERF 105 Query: 402 EAELLKFSKD 373 E +K K+ Sbjct: 106 R-EAMKEKKE 114 [22][TOP] >UniRef100_B3S6B1 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S6B1_TRIAD Length = 116 Score = 73.9 bits (180), Expect = 8e-12 Identities = 32/62 (51%), Positives = 46/62 (74%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDP V+FAGYK+PHPL+Y ++IR+ TTS SP +A++ ++ DL EL+ L F Sbjct: 46 IRAQLLKDPQVIFAGYKVPHPLEYDVVIRVQTTSNYSPEEAFSNALTDLISELNVLDDRF 105 Query: 402 EA 397 +A Sbjct: 106 KA 107 [23][TOP] >UniRef100_B0WDB4 DNA-directed RNA polymerase II subunit J n=1 Tax=Culex quinquefasciatus RepID=B0WDB4_CULQU Length = 117 Score = 73.9 bits (180), Expect = 8e-12 Identities = 35/60 (58%), Positives = 43/60 (71%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDPNVLFAGYKLPHPL++K +IRI TTS SP +A+ +I DL EL + F Sbjct: 46 IRNQLLKDPNVLFAGYKLPHPLEHKFVIRIQTTSDYSPQEAFMNAITDLLSELSLFEERF 105 [24][TOP] >UniRef100_UPI0000D5702A PREDICTED: similar to DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Tribolium castaneum RepID=UPI0000D5702A Length = 117 Score = 73.6 bits (179), Expect = 1e-11 Identities = 37/70 (52%), Positives = 48/70 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDPNVLFAGYK+PHPL++K ++RI TTS SP +A SI DL EL + F Sbjct: 46 IRNQLLKDPNVLFAGYKVPHPLEHKFVLRIQTTSDYSPQEALMNSITDLISELSLFEERF 105 Query: 402 EAELLKFSKD 373 + E +K K+ Sbjct: 106 K-EAIKEKKE 114 [25][TOP] >UniRef100_UPI000020F7F2 DNA directed RNA polymerase II polypeptide J-related n=1 Tax=Homo sapiens RepID=UPI000020F7F2 Length = 115 Score = 73.6 bits (179), Expect = 1e-11 Identities = 35/65 (53%), Positives = 45/65 (69%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 45 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104 Query: 402 EAELL 388 LL Sbjct: 105 RTCLL 109 [26][TOP] >UniRef100_Q4TAB3 Chromosome undetermined SCAF7390, whole genome shotgun sequence n=1 Tax=Tetraodon nigroviridis RepID=Q4TAB3_TETNG Length = 117 Score = 73.6 bits (179), Expect = 1e-11 Identities = 33/64 (51%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDP VLFAGYK+PHPL++KI+IR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IRAQLMKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 Query: 402 EAEL 391 + Sbjct: 106 RVAI 109 [27][TOP] >UniRef100_C1BLH2 DNA-directed RNA polymerase II subunit J n=1 Tax=Osmerus mordax RepID=C1BLH2_OSMMO Length = 117 Score = 73.6 bits (179), Expect = 1e-11 Identities = 33/64 (51%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDP VLFAGYK+PHPL++KI+IR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IRSQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 Query: 402 EAEL 391 + Sbjct: 106 RVSI 109 [28][TOP] >UniRef100_B5XEX2 DNA-directed RNA polymerase II subunit RPB11-a n=3 Tax=Euteleostei RepID=B5XEX2_SALSA Length = 117 Score = 73.6 bits (179), Expect = 1e-11 Identities = 33/64 (51%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDP VLFAGYK+PHPL++KI+IR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IRQQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 Query: 402 EAEL 391 + Sbjct: 106 RVAI 109 [29][TOP] >UniRef100_Q9H1A7 DNA-directed RNA polymerase II subunit RPB11-b2 n=1 Tax=Homo sapiens RepID=RPB1C_HUMAN Length = 115 Score = 73.6 bits (179), Expect = 1e-11 Identities = 35/65 (53%), Positives = 45/65 (69%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 45 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104 Query: 402 EAELL 388 LL Sbjct: 105 RTCLL 109 [30][TOP] >UniRef100_Q9GZM3 DNA-directed RNA polymerase II subunit RPB11-b1 n=1 Tax=Homo sapiens RepID=RPB1B_HUMAN Length = 115 Score = 73.6 bits (179), Expect = 1e-11 Identities = 35/65 (53%), Positives = 45/65 (69%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 45 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104 Query: 402 EAELL 388 LL Sbjct: 105 RTCLL 109 [31][TOP] >UniRef100_UPI000180BEE7 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide J n=1 Tax=Ciona intestinalis RepID=UPI000180BEE7 Length = 117 Score = 73.2 bits (178), Expect = 1e-11 Identities = 33/62 (53%), Positives = 44/62 (70%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR QL KDP VLFAGYK+PHPL++K I+R+ TT SP +A+ +I DL E+ L+ F Sbjct: 46 LRTQLLKDPKVLFAGYKVPHPLEHKFILRVQTTGDYSPQEAFTNAITDLISEISLLEERF 105 Query: 402 EA 397 +A Sbjct: 106 KA 107 [32][TOP] >UniRef100_UPI0000019E7A UPI0000019E7A related cluster n=1 Tax=Takifugu rubripes RepID=UPI0000019E7A Length = 117 Score = 73.2 bits (178), Expect = 1e-11 Identities = 33/64 (51%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDP VLFAGYK+PHPL++KI+IR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IRAQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 Query: 402 EAEL 391 + Sbjct: 106 RVAI 109 [33][TOP] >UniRef100_C1BJJ1 DNA-directed RNA polymerase II subunit J n=1 Tax=Osmerus mordax RepID=C1BJJ1_OSMMO Length = 117 Score = 73.2 bits (178), Expect = 1e-11 Identities = 33/64 (51%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDP VLFAGYK+PHPL++KI+IR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IRSQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 Query: 402 EAEL 391 + Sbjct: 106 RVAI 109 [34][TOP] >UniRef100_Q4VBU5 Novel protein (Zgc:110005) n=1 Tax=Danio rerio RepID=Q4VBU5_DANRE Length = 117 Score = 72.8 bits (177), Expect = 2e-11 Identities = 32/64 (50%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDP VLFAGYK+PHPL++K++IR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IRSQLLKDPQVLFAGYKVPHPLEHKVVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 Query: 402 EAEL 391 + Sbjct: 106 RVAI 109 [35][TOP] >UniRef100_Q59FR2 MGC13098 protein variant (Fragment) n=1 Tax=Homo sapiens RepID=Q59FR2_HUMAN Length = 180 Score = 72.8 bits (177), Expect = 2e-11 Identities = 33/60 (55%), Positives = 44/60 (73%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL +EL L+ F Sbjct: 67 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLIRELSLLEERF 126 [36][TOP] >UniRef100_UPI000194D687 PREDICTED: putative DNA directed RNA polymerase II polypeptide J n=1 Tax=Taeniopygia guttata RepID=UPI000194D687 Length = 113 Score = 72.4 bits (176), Expect = 2e-11 Identities = 33/64 (51%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 42 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 101 Query: 402 EAEL 391 + Sbjct: 102 RVAI 105 [37][TOP] >UniRef100_UPI0000E81348 PREDICTED: similar to Ras GTPase-activating protein 4 (RasGAP-activating-like protein 2) (Calcium-promoted Ras inactivator) n=1 Tax=Gallus gallus RepID=UPI0000E81348 Length = 763 Score = 72.4 bits (176), Expect = 2e-11 Identities = 33/64 (51%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 692 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 751 Query: 402 EAEL 391 + Sbjct: 752 RVAI 755 [38][TOP] >UniRef100_UPI0000E2167E PREDICTED: similar to RAS p21 protein activator 4, partial n=1 Tax=Pan troglodytes RepID=UPI0000E2167E Length = 262 Score = 72.4 bits (176), Expect = 2e-11 Identities = 33/64 (51%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 191 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 250 Query: 402 EAEL 391 + Sbjct: 251 RVAI 254 [39][TOP] >UniRef100_UPI0000D9A6ED PREDICTED: similar to DNA-directed RNA polymerase II subunit J (DNA-directed RNA polymerase II 13.3 kDa polypeptide) (RPB11) n=1 Tax=Macaca mulatta RepID=UPI0000D9A6ED Length = 191 Score = 72.4 bits (176), Expect = 2e-11 Identities = 33/64 (51%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 120 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 179 Query: 402 EAEL 391 + Sbjct: 180 RVAI 183 [40][TOP] >UniRef100_UPI00005A0EE3 PREDICTED: similar to RAS p21 protein activator 4 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0EE3 Length = 1108 Score = 72.4 bits (176), Expect = 2e-11 Identities = 33/64 (51%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 1037 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 1096 Query: 402 EAEL 391 + Sbjct: 1097 RVAI 1100 [41][TOP] >UniRef100_UPI00003AB60B UPI00003AB60B related cluster n=1 Tax=Gallus gallus RepID=UPI00003AB60B Length = 100 Score = 72.4 bits (176), Expect = 2e-11 Identities = 33/64 (51%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 29 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 88 Query: 402 EAEL 391 + Sbjct: 89 RVAI 92 [42][TOP] >UniRef100_Q28CA5 Polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa n=1 Tax=Xenopus (Silurana) tropicalis RepID=Q28CA5_XENTR Length = 117 Score = 72.4 bits (176), Expect = 2e-11 Identities = 33/64 (51%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 Query: 402 EAEL 391 + Sbjct: 106 RVAI 109 [43][TOP] >UniRef100_Q29MR4 GA19897 n=2 Tax=pseudoobscura subgroup RepID=Q29MR4_DROPS Length = 117 Score = 72.4 bits (176), Expect = 2e-11 Identities = 33/61 (54%), Positives = 45/61 (73%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDPNVLFAGYK+PHPL++K +IRI TT++ SP +A+ +I DL EL + F Sbjct: 46 IRNQLLKDPNVLFAGYKVPHPLEHKFVIRIQTTAEYSPQEAFMNAITDLLAELSLFEERF 105 Query: 402 E 400 + Sbjct: 106 K 106 [44][TOP] >UniRef100_O08740 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Mus musculus RepID=RPB11_MOUSE Length = 117 Score = 72.4 bits (176), Expect = 2e-11 Identities = 33/64 (51%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 Query: 402 EAEL 391 + Sbjct: 106 RGAI 109 [45][TOP] >UniRef100_P52435 DNA-directed RNA polymerase II subunit RPB11-a n=5 Tax=Amniota RepID=RPB11_HUMAN Length = 117 Score = 72.4 bits (176), Expect = 2e-11 Identities = 33/64 (51%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 Query: 402 EAEL 391 + Sbjct: 106 RVAI 109 [46][TOP] >UniRef100_UPI0000E4A5EB PREDICTED: similar to RNA polymerase II subunit n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A5EB Length = 117 Score = 72.0 bits (175), Expect = 3e-11 Identities = 31/70 (44%), Positives = 45/70 (64%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR QL KDP VLFAGYK+PHPL++K ++R+ TT SP +A+ +I DL E+ L+ F Sbjct: 46 LRAQLLKDPQVLFAGYKVPHPLEHKFVLRVQTTPDYSPQEAFTNAITDLISEISLLEERF 105 Query: 402 EAELLKFSKD 373 ++ + Sbjct: 106 NVSSIRLDSE 115 [47][TOP] >UniRef100_UPI0000E49F0F PREDICTED: similar to RNA polymerase II subunit, partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E49F0F Length = 99 Score = 72.0 bits (175), Expect = 3e-11 Identities = 31/70 (44%), Positives = 45/70 (64%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR QL KDP VLFAGYK+PHPL++K ++R+ TT SP +A+ +I DL E+ L+ F Sbjct: 28 LRAQLLKDPQVLFAGYKVPHPLEHKFVLRVQTTPDYSPQEAFTNAITDLISEISLLEERF 87 Query: 402 EAELLKFSKD 373 ++ + Sbjct: 88 NVSSIRLDSE 97 [48][TOP] >UniRef100_UPI0000E21685 PREDICTED: RAS p21 protein activator 4 isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E21685 Length = 576 Score = 72.0 bits (175), Expect = 3e-11 Identities = 33/60 (55%), Positives = 43/60 (71%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 463 IKTQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 522 [49][TOP] >UniRef100_UPI00005EC058 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis domestica RepID=UPI00005EC058 Length = 128 Score = 72.0 bits (175), Expect = 3e-11 Identities = 33/60 (55%), Positives = 43/60 (71%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 [50][TOP] >UniRef100_UPI00001F2CA1 polymerase (RNA) II (DNA directed) polypeptide J n=1 Tax=Mus musculus RepID=UPI00001F2CA1 Length = 111 Score = 72.0 bits (175), Expect = 3e-11 Identities = 33/60 (55%), Positives = 43/60 (71%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 [51][TOP] >UniRef100_UPI0001AE70B6 UPI0001AE70B6 related cluster n=1 Tax=Homo sapiens RepID=UPI0001AE70B6 Length = 180 Score = 72.0 bits (175), Expect = 3e-11 Identities = 33/60 (55%), Positives = 43/60 (71%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 67 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 126 [52][TOP] >UniRef100_UPI0000163C17 UPI0000163C17 related cluster n=1 Tax=Homo sapiens RepID=UPI0000163C17 Length = 158 Score = 72.0 bits (175), Expect = 3e-11 Identities = 33/60 (55%), Positives = 43/60 (71%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 45 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104 [53][TOP] >UniRef100_Q5M778 LOC496260 protein n=1 Tax=Xenopus laevis RepID=Q5M778_XENLA Length = 117 Score = 72.0 bits (175), Expect = 3e-11 Identities = 32/64 (50%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KI+IR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IKSQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 Query: 402 EAEL 391 + Sbjct: 106 RVAI 109 [54][TOP] >UniRef100_Q9H1A6 RPB11a protein n=1 Tax=Homo sapiens RepID=Q9H1A6_HUMAN Length = 127 Score = 72.0 bits (175), Expect = 3e-11 Identities = 33/60 (55%), Positives = 43/60 (71%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 [55][TOP] >UniRef100_Q8TDE6 DNA-directed RNA polymerase II subunit 11 n=1 Tax=Homo sapiens RepID=Q8TDE6_HUMAN Length = 158 Score = 72.0 bits (175), Expect = 3e-11 Identities = 33/60 (55%), Positives = 43/60 (71%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 45 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104 [56][TOP] >UniRef100_A6NK79 Putative uncharacterized protein POLR2J n=1 Tax=Homo sapiens RepID=A6NK79_HUMAN Length = 116 Score = 72.0 bits (175), Expect = 3e-11 Identities = 33/60 (55%), Positives = 43/60 (71%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 [57][TOP] >UniRef100_A6NFM0 Putative uncharacterized protein POLR2J2 n=1 Tax=Homo sapiens RepID=A6NFM0_HUMAN Length = 158 Score = 72.0 bits (175), Expect = 3e-11 Identities = 33/60 (55%), Positives = 43/60 (71%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 45 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104 [58][TOP] >UniRef100_UPI000194D688 PREDICTED: similar to DNA directed RNA polymerase II polypeptide J n=1 Tax=Taeniopygia guttata RepID=UPI000194D688 Length = 137 Score = 71.6 bits (174), Expect = 4e-11 Identities = 33/62 (53%), Positives = 43/62 (69%) Frame = -1 Query: 576 MQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFEA 397 +QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 68 VQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRV 127 Query: 396 EL 391 + Sbjct: 128 AI 129 [59][TOP] >UniRef100_UPI0000F4F017 polymerase (RNA) II (DNA directed) polypeptide J n=1 Tax=Mus musculus RepID=UPI0000F4F017 Length = 87 Score = 71.6 bits (174), Expect = 4e-11 Identities = 33/63 (52%), Positives = 43/63 (68%) Frame = -1 Query: 579 RMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFE 400 + QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 17 KKQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFR 76 Query: 399 AEL 391 + Sbjct: 77 VAI 79 [60][TOP] >UniRef100_Q9VJE4 DNA-directed RNA polymerase II subunit RPB11 n=9 Tax=Drosophila RepID=RPB11_DROME Length = 117 Score = 71.6 bits (174), Expect = 4e-11 Identities = 33/61 (54%), Positives = 44/61 (72%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDPNVLFAGYK+PHPL++K +IRI TT+ SP +A+ +I DL EL + F Sbjct: 46 IRNQLLKDPNVLFAGYKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLFEERF 105 Query: 402 E 400 + Sbjct: 106 K 106 [61][TOP] >UniRef100_UPI00015B4993 PREDICTED: similar to DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Nasonia vitripennis RepID=UPI00015B4993 Length = 117 Score = 71.2 bits (173), Expect = 5e-11 Identities = 35/70 (50%), Positives = 48/70 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDP VLFAGYKLPHPL++K +IRI TTS +P +A+ ++ DL EL + F Sbjct: 46 IRNQLLKDPQVLFAGYKLPHPLEHKFVIRIQTTSDHTPHEAFMNAVTDLIAELSLFEERF 105 Query: 402 EAELLKFSKD 373 + E +K K+ Sbjct: 106 K-EAIKEKKE 114 [62][TOP] >UniRef100_B7PS85 RNA polymerases L, putative n=1 Tax=Ixodes scapularis RepID=B7PS85_IXOSC Length = 117 Score = 71.2 bits (173), Expect = 5e-11 Identities = 32/61 (52%), Positives = 44/61 (72%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDP VLFAGYK+PHPL++K I+R+ TT S+P +A+ +I DL EL L+ F Sbjct: 46 IRAQLLKDPCVLFAGYKVPHPLEHKFILRVQTTPDSTPQEAFTNAITDLISELSLLEERF 105 Query: 402 E 400 + Sbjct: 106 K 106 [63][TOP] >UniRef100_Q3TYI2 Putative uncharacterized protein n=1 Tax=Mus musculus RepID=Q3TYI2_MOUSE Length = 117 Score = 70.9 bits (172), Expect = 7e-11 Identities = 32/64 (50%), Positives = 43/64 (67%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLF GYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IKSQLLKDPQVLFVGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 Query: 402 EAEL 391 + Sbjct: 106 RVAI 109 [64][TOP] >UniRef100_C9JYL5 Putative uncharacterized protein POLR2J3 n=1 Tax=Homo sapiens RepID=C9JYL5_HUMAN Length = 128 Score = 70.9 bits (172), Expect = 7e-11 Identities = 33/57 (57%), Positives = 41/57 (71%) Frame = -1 Query: 573 QLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 QL KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 18 QLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 74 [65][TOP] >UniRef100_UPI000051A5CD PREDICTED: similar to DNA-directed RNA polymerase II subunit J (DNA-directed RNA polymerase II 13.3 kDa polypeptide) (RPB11) n=1 Tax=Apis mellifera RepID=UPI000051A5CD Length = 117 Score = 70.1 bits (170), Expect = 1e-10 Identities = 35/70 (50%), Positives = 48/70 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDP VLFAGYK+PHPL++K +IRI TTS +P +A+ +I DL EL + F Sbjct: 46 IRNQLLKDPQVLFAGYKVPHPLEHKFVIRIQTTSDYTPHEAFMHAITDLIAELSLFEERF 105 Query: 402 EAELLKFSKD 373 + E +K K+ Sbjct: 106 K-EAIKEKKE 114 [66][TOP] >UniRef100_UPI000013CAF5 UPI000013CAF5 related cluster n=1 Tax=Homo sapiens RepID=UPI000013CAF5 Length = 117 Score = 70.1 bits (170), Expect = 1e-10 Identities = 33/59 (55%), Positives = 41/59 (69%) Frame = -1 Query: 564 KDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFEAELL 388 KDP VLFAGYK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F LL Sbjct: 53 KDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRTCLL 111 [67][TOP] >UniRef100_C6K0C3 Putative DNA-directed RNA polymerase II subunit J (Fragment) n=9 Tax=Pyretophorus RepID=C6K0C3_ANOAR Length = 85 Score = 70.1 bits (170), Expect = 1e-10 Identities = 32/52 (61%), Positives = 41/52 (78%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKE 427 +R QL KDPNVLFAGYKLPHPL++K ++RI TTS+ SP +A+ +I DL E Sbjct: 34 IRNQLLKDPNVLFAGYKLPHPLEHKFVLRIQTTSEYSPHEAFMNAITDLLSE 85 [68][TOP] >UniRef100_UPI000186CAF7 DNA-directed RNA polymerase II subunit J, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186CAF7 Length = 117 Score = 69.7 bits (169), Expect = 2e-10 Identities = 35/70 (50%), Positives = 47/70 (67%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDPNVLFAGYK+PHPL++K ++RI TTS +P A +I DL EL + F Sbjct: 46 IRDQLLKDPNVLFAGYKVPHPLEHKFVLRIQTTSDYTPQDALMNAITDLLSELSLFEERF 105 Query: 402 EAELLKFSKD 373 + E +K K+ Sbjct: 106 K-EAIKEKKE 114 [69][TOP] >UniRef100_Q8IH32 GM15177p n=1 Tax=Drosophila melanogaster RepID=Q8IH32_DROME Length = 136 Score = 69.7 bits (169), Expect = 2e-10 Identities = 32/58 (55%), Positives = 42/58 (72%) Frame = -1 Query: 573 QLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFE 400 QL KDPNVLFAGYK+PHPL++K +IRI TT+ SP +A+ +I DL EL + F+ Sbjct: 68 QLLKDPNVLFAGYKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLFEERFK 125 [70][TOP] >UniRef100_C6K0F4 Putative DNA-directed RNA polymerase II subunit J (Fragment) n=1 Tax=Anopheles gambiae RepID=C6K0F4_ANOGA Length = 79 Score = 69.7 bits (169), Expect = 2e-10 Identities = 32/52 (61%), Positives = 41/52 (78%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKE 427 +R QL KDPNVLFAGYKLPHPL++K ++RI TTS+ SP +A+ +I DL E Sbjct: 28 IRNQLLKDPNVLFAGYKLPHPLEHKFVLRIQTTSEYSPHEAFMXAITDLLSE 79 [71][TOP] >UniRef100_A9V2R7 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V2R7_MONBE Length = 119 Score = 69.7 bits (169), Expect = 2e-10 Identities = 31/64 (48%), Positives = 47/64 (73%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 L QL KDP VLFAGYK+PHPL++ I++R+HTT+Q SP +A Q+++D+ ++ L+S Sbjct: 46 LASQLAKDPRVLFAGYKVPHPLEHYILLRVHTTAQYSPKEALKQALHDVIYDVAHLQSSL 105 Query: 402 EAEL 391 +L Sbjct: 106 REQL 109 [72][TOP] >UniRef100_A7SGE2 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SGE2_NEMVE Length = 117 Score = 69.7 bits (169), Expect = 2e-10 Identities = 31/62 (50%), Positives = 44/62 (70%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR QL KDP V+FAGYK+ HPL++K ++R+ TTS SP +A+ +I DL E+ L+ F Sbjct: 46 LREQLLKDPQVIFAGYKVSHPLEHKFVLRVQTTSDYSPQEAFTHAITDLISEVSLLEERF 105 Query: 402 EA 397 +A Sbjct: 106 KA 107 [73][TOP] >UniRef100_UPI0001868C2E hypothetical protein BRAFLDRAFT_286064 n=1 Tax=Branchiostoma floridae RepID=UPI0001868C2E Length = 116 Score = 69.3 bits (168), Expect = 2e-10 Identities = 30/61 (49%), Positives = 43/61 (70%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR QL KDP V+FAGYK+PHPL++K ++R+ TT SP +A+ +I DL E+ L+ F Sbjct: 46 LRAQLLKDPQVIFAGYKVPHPLEHKFVLRLQTTPDYSPQEAFTNAITDLISEVSLLEERF 105 Query: 402 E 400 + Sbjct: 106 K 106 [74][TOP] >UniRef100_C1BF62 DNA-directed RNA polymerase II subunit J n=1 Tax=Oncorhynchus mykiss RepID=C1BF62_ONCMY Length = 117 Score = 69.3 bits (168), Expect = 2e-10 Identities = 31/64 (48%), Positives = 42/64 (65%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL++K +IR+ TT SP +A+ I DL EL L+ F Sbjct: 46 IKQQLLKDPQVLFAGYKVPHPLEHKTVIRVQTTPDYSPQEAFTNVITDLISELSLLEERF 105 Query: 402 EAEL 391 + Sbjct: 106 RVAI 109 [75][TOP] >UniRef100_Q69G41 RNA polymerase II subunit n=1 Tax=Branchiostoma belcheri RepID=Q69G41_BRABE Length = 135 Score = 69.3 bits (168), Expect = 2e-10 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR QL KDP V+FAGYK+PHPL++K ++R+ TT SP +A+ +I DL E+ L+ F Sbjct: 46 LRAQLLKDPQVIFAGYKVPHPLEHKFVLRVQTTPDYSPQEAFTNAITDLISEVSLLEERF 105 [76][TOP] >UniRef100_C3YY41 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YY41_BRAFL Length = 117 Score = 68.9 bits (167), Expect = 3e-10 Identities = 29/61 (47%), Positives = 43/61 (70%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDP V+FAGYK+PHPL++K ++R+ TT SP +A+ +I DL E+ L+ F Sbjct: 47 IRQQLLKDPQVIFAGYKVPHPLEHKFVLRLQTTPDYSPQEAFTNAITDLISEVSLLEERF 106 Query: 402 E 400 + Sbjct: 107 K 107 [77][TOP] >UniRef100_Q9XVH6 Probable DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Caenorhabditis elegans RepID=RPB11_CAEEL Length = 122 Score = 68.9 bits (167), Expect = 3e-10 Identities = 33/66 (50%), Positives = 46/66 (69%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 L++QL KDP VLFAGYK PHPL++KI++RI TT+ ++P A +I DL EL L+ Sbjct: 45 LKIQLLKDPEVLFAGYKNPHPLEHKILLRIQTTNNTTPADALTTAITDLVGELSLLEHRI 104 Query: 402 EAELLK 385 +A + K Sbjct: 105 DAAIKK 110 [78][TOP] >UniRef100_UPI0001923CF4 PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001923CF4 Length = 117 Score = 68.2 bits (165), Expect = 5e-10 Identities = 33/70 (47%), Positives = 47/70 (67%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDP V+FAGY++PHPL++K +RI TT SP +A+ +I DL E+ L+ F Sbjct: 46 IRSQLLKDPQVIFAGYRVPHPLEHKFNVRIQTTPDYSPQEAFTSAITDLLSEISLLEERF 105 Query: 402 EAELLKFSKD 373 ++ LK KD Sbjct: 106 KS-ALKEKKD 114 [79][TOP] >UniRef100_A4S056 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S056_OSTLU Length = 115 Score = 68.2 bits (165), Expect = 5e-10 Identities = 27/64 (42%), Positives = 46/64 (71%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LRM+LHK+P+V+FAGYK PHP ++I++++HT + ++P+QA ++ +L E+ L F Sbjct: 46 LRMELHKNPDVVFAGYKNPHPTDHRIVLKVHTNANTTPVQALRDAVTNLRAEVGDLSQQF 105 Query: 402 EAEL 391 E+ Sbjct: 106 ADEI 109 [80][TOP] >UniRef100_C4WRJ5 ACYPI008208 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WRJ5_ACYPI Length = 117 Score = 67.8 bits (164), Expect = 6e-10 Identities = 34/64 (53%), Positives = 41/64 (64%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDPNVLFAGYK PHPL++K +RI TTS +P A SI DL EL + F Sbjct: 46 IRNQLLKDPNVLFAGYKQPHPLEHKFELRIQTTSDYTPQDALTNSITDLLAELSLFEERF 105 Query: 402 EAEL 391 + L Sbjct: 106 KEAL 109 [81][TOP] >UniRef100_Q60SM4 Probable DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Caenorhabditis briggsae RepID=RPB11_CAEBR Length = 122 Score = 67.0 bits (162), Expect = 1e-09 Identities = 31/66 (46%), Positives = 46/66 (69%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 L++QL KDP VLFAGYK PHPL++KI++R+ TT+ ++P A +I DL EL L+ Sbjct: 45 LKIQLLKDPEVLFAGYKNPHPLEHKILLRVQTTNATTPADALTTAITDLVGELSLLEHRI 104 Query: 402 EAELLK 385 ++ + K Sbjct: 105 DSAIKK 110 [82][TOP] >UniRef100_C4Q8A9 DNA-directed rna polymerase II 13.3 kD polypeptide, putative n=1 Tax=Schistosoma mansoni RepID=C4Q8A9_SCHMA Length = 110 Score = 65.5 bits (158), Expect = 3e-09 Identities = 27/57 (47%), Positives = 40/57 (70%) Frame = -1 Query: 573 QLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 QL KDP VLFAGYK PHPL++KI+IR+HT ++P+ + ++ DL E+ ++ F Sbjct: 49 QLLKDPRVLFAGYKAPHPLEHKIVIRVHTAHPATPVDVFVSALKDLISEISNIEEQF 105 [83][TOP] >UniRef100_UPI000155D3C2 PREDICTED: similar to RNA polymerase II n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155D3C2 Length = 117 Score = 65.1 bits (157), Expect = 4e-09 Identities = 30/64 (46%), Positives = 41/64 (64%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VL YK+PHPL++KIIIR+ TT SP +A+ +I DL EL L+ F Sbjct: 46 IKSQLLKDPQVLLQEYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105 Query: 402 EAEL 391 + Sbjct: 106 RVAI 109 [84][TOP] >UniRef100_A6YPS3 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Triatoma infestans RepID=A6YPS3_TRIIF Length = 117 Score = 65.1 bits (157), Expect = 4e-09 Identities = 33/70 (47%), Positives = 43/70 (61%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL KDP VLFAGYK+PHPL K +IRI TT+ +P +I DL EL + F Sbjct: 46 IRNQLLKDPKVLFAGYKVPHPLDPKFVIRIQTTNDETPQSVLKNAITDLISELSLFEERF 105 Query: 402 EAELLKFSKD 373 + E +K K+ Sbjct: 106 K-EAIKDKKE 114 [85][TOP] >UniRef100_B4I598 GM17133 n=1 Tax=Drosophila sechellia RepID=B4I598_DROSE Length = 105 Score = 64.7 bits (156), Expect = 5e-09 Identities = 29/49 (59%), Positives = 38/49 (77%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDL 436 +R QL KD NVLFAGYK+PHPL++K +IRI TT+ SP +A+ +I DL Sbjct: 46 IRNQLLKDHNVLFAGYKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDL 94 [86][TOP] >UniRef100_A8PTP7 RNA polymerase II., putative n=1 Tax=Brugia malayi RepID=A8PTP7_BRUMA Length = 133 Score = 64.7 bits (156), Expect = 5e-09 Identities = 30/57 (52%), Positives = 38/57 (66%) Frame = -1 Query: 573 QLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 QL KDP VLFAGYK PHPL++K I+R+ TTS ++P A +I DL EL + F Sbjct: 65 QLLKDPQVLFAGYKCPHPLEHKFILRVQTTSDTTPEDALTSAITDLMAELSLFEERF 121 [87][TOP] >UniRef100_UPI0000E21436 PREDICTED: similar to MGC13098 protein n=1 Tax=Pan troglodytes RepID=UPI0000E21436 Length = 398 Score = 63.9 bits (154), Expect = 9e-09 Identities = 32/60 (53%), Positives = 39/60 (65%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 ++ QL KDP VLFAGYK+PHPL+ KIII TT SP +A +I DL EL L+ F Sbjct: 285 IKSQLLKDPQVLFAGYKVPHPLERKIIIEXQTTPDYSPQEALPNAIADLISELSLLEERF 344 [88][TOP] >UniRef100_UPI0001792BF8 PREDICTED: similar to GA19897-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792BF8 Length = 119 Score = 63.5 bits (153), Expect = 1e-08 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTT-SQSSPMQAYNQSINDLDKELDTLKSG 406 +R QL KDPNVLFAGYKLPHPL++K +RI T+ + +P A S+ DL EL + Sbjct: 46 IRNQLLKDPNVLFAGYKLPHPLEHKFELRIQTSCPEYTPQDALTNSLTDLLAELSLFEER 105 Query: 405 FEAELLKFSKD 373 F+ + LK KD Sbjct: 106 FK-DALKQKKD 115 [89][TOP] >UniRef100_Q01GZ2 RPB11_CAEEL Probable DNA-directed RNA polymerase II 13.3 kDa polypeptide (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01GZ2_OSTTA Length = 230 Score = 62.0 bits (149), Expect = 3e-08 Identities = 23/61 (37%), Positives = 43/61 (70%) Frame = -1 Query: 573 QLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFEAE 394 +LHK+P+V+FAGYK PHP +++I+++HT + ++P+QA ++ +L E+ + F E Sbjct: 20 ELHKNPDVVFAGYKNPHPTDHRVILKVHTNANTTPVQALRDAVTNLRAEVSDIAQQFADE 79 Query: 393 L 391 + Sbjct: 80 I 80 [90][TOP] >UniRef100_Q86JJ5 DNA-directed RNA polymerase II subunit rpb11 n=1 Tax=Dictyostelium discoideum RepID=RPB11_DICDI Length = 120 Score = 60.1 bits (144), Expect = 1e-07 Identities = 24/66 (36%), Positives = 46/66 (69%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +RMQL D +++FAGY++PHPL++ + IRI T + ++P++ +S+ L +E +L++ F Sbjct: 46 IRMQLIADQDIIFAGYRMPHPLEHNVNIRIQTNNNTNPLECVQKSMECLSREFTSLENSF 105 Query: 402 EAELLK 385 ++ K Sbjct: 106 IEQVQK 111 [91][TOP] >UniRef100_Q5KMB4 DNA-directed RNA polymerase ii 13.3 kDa polypeptide, putative n=1 Tax=Filobasidiella neoformans RepID=Q5KMB4_CRYNE Length = 162 Score = 58.9 bits (141), Expect = 3e-07 Identities = 26/63 (41%), Positives = 44/63 (69%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR QL DP VLFAGYK+PHPL+ I+++I T +S+P +A ++ ++L ++ +K+ F Sbjct: 46 LRAQLMLDPTVLFAGYKVPHPLENDILLKIQTDERSNPAEALKRACHELIRQTVHIKAQF 105 Query: 402 EAE 394 + + Sbjct: 106 QQQ 108 [92][TOP] >UniRef100_C4LXS9 RNA polymerases II subunit, putative n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4LXS9_ENTHI Length = 112 Score = 58.5 bits (140), Expect = 4e-07 Identities = 27/62 (43%), Positives = 43/62 (69%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR+ L ++P+VLFAGY+ PHPL Y I + I T +P QA Q+++D+ E++ +++ F Sbjct: 43 LRVMLLRNPHVLFAGYRQPHPLNYVIEMTIRTDMTITPKQALEQAMDDVIHEIEIMQNEF 102 Query: 402 EA 397 EA Sbjct: 103 EA 104 [93][TOP] >UniRef100_C5LKR8 DNA-directed RNA polymerase II, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LKR8_9ALVE Length = 149 Score = 58.2 bits (139), Expect = 5e-07 Identities = 25/64 (39%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR +L ++ V FAGYK+PHPL+ K+++R+ TSQ++P++A +++ L + D L+ F Sbjct: 63 LRSELLRNRQVKFAGYKVPHPLENKLLMRVQVTSQTTPVEAMKEALKSLRSKGDQLEKEF 122 Query: 402 EAEL 391 + L Sbjct: 123 DRSL 126 [94][TOP] >UniRef100_C5KDT1 DNA-directed RNA polymerase II, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KDT1_9ALVE Length = 149 Score = 58.2 bits (139), Expect = 5e-07 Identities = 25/64 (39%), Positives = 44/64 (68%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR +L ++ V FAGYK+PHPL+ K+++R+ TSQ++P++A +++ L + D L+ F Sbjct: 63 LRSELLRNRQVKFAGYKVPHPLENKLLMRVQVTSQTTPVEAMKEALKSLRSKGDQLEKEF 122 Query: 402 EAEL 391 + L Sbjct: 123 DRSL 126 [95][TOP] >UniRef100_A3LX93 RNA polymerase II core subunit n=1 Tax=Pichia stipitis RepID=A3LX93_PICST Length = 122 Score = 58.2 bits (139), Expect = 5e-07 Identities = 29/63 (46%), Positives = 38/63 (60%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR QL KDP VLFA YK+ HPL ++RI T SP +A + + L ELD +K+ F Sbjct: 46 LRAQLLKDPRVLFAAYKVEHPLFANFVLRIQTEDDYSPREALKNACSGLISELDVIKNRF 105 Query: 402 EAE 394 + E Sbjct: 106 KDE 108 [96][TOP] >UniRef100_B0E866 DNA-directed RNA polymerase II subunit RPB11, putative n=1 Tax=Entamoeba dispar SAW760 RepID=B0E866_ENTDI Length = 112 Score = 57.8 bits (138), Expect = 6e-07 Identities = 26/62 (41%), Positives = 44/62 (70%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR+ L ++P+VLFAGY+ PHPL Y I + I T + +P QA Q+++D+ E++ +++ F Sbjct: 43 LRVMLLRNPHVLFAGYRQPHPLNYIIEMTIRTDTTITPKQALEQAMDDVIHEIEIMQNEF 102 Query: 402 EA 397 E+ Sbjct: 103 ES 104 [97][TOP] >UniRef100_B6K818 DNA-directed RNA polymerase II complex subunit Rpb11 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K818_SCHJY Length = 123 Score = 57.4 bits (137), Expect = 8e-07 Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR QL D V+FAGY++PHPL + I+R+ TT + SP QA + L L+ LK F Sbjct: 45 LRTQLLYDERVVFAGYRVPHPLNHNFILRVQTTEECSPKQAIIDASKSLITVLEQLKVNF 104 Query: 402 --EAELLKFSKD 373 E EL K S + Sbjct: 105 TREWELKKISDE 116 [98][TOP] >UniRef100_B8C993 Probable dna-directed RNA polymerase II 13.6 kDa polypeptide n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C993_THAPS Length = 124 Score = 57.0 bits (136), Expect = 1e-06 Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIH-TTSQSSPMQAYNQSINDLDKELDTLKSG 406 LRMQL +DP V FAGY PHPL +KI ++I TTSQ +P + + +I DL E D L + Sbjct: 46 LRMQLLRDPAVKFAGYMHPHPLIHKIHLKIQTTTSQVAPAETLSAAIEDLSNETDHLLTQ 105 Query: 405 FEAELLKFSKD 373 + K+ K+ Sbjct: 106 VTDAIDKWKKE 116 [99][TOP] >UniRef100_A5DVI5 DNA-directed RNA polymerase II 13.6 kDa polypeptide n=1 Tax=Lodderomyces elongisporus RepID=A5DVI5_LODEL Length = 121 Score = 56.2 bits (134), Expect = 2e-06 Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 5/76 (6%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR QL KDP V+FA YK+ HPL ++RI T +P +A + N L EL +KS F Sbjct: 46 LRAQLLKDPRVIFAAYKVEHPLFANFVLRIQTEEDYTPKEALKNACNMLINELGAIKSKF 105 Query: 402 EAE-----LLKFSKDY 370 E LL DY Sbjct: 106 SEEWALKVLLNNEDDY 121 [100][TOP] >UniRef100_C4YFG3 DNA-directed RNA polymerase II 13.6 kDa polypeptide n=1 Tax=Candida albicans RepID=C4YFG3_CANAL Length = 124 Score = 55.8 bits (133), Expect = 2e-06 Identities = 29/63 (46%), Positives = 36/63 (57%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR QL KD VLFA YK+ HPL ++RI T SP +A + + L ELD +KS F Sbjct: 46 LRAQLLKDDRVLFAAYKVEHPLFANFVLRIQTEDDYSPREALQNACSGLISELDVIKSKF 105 Query: 402 EAE 394 E Sbjct: 106 NDE 108 [101][TOP] >UniRef100_B9W6P5 DNA-directed RNA polymerase II [13.6 kDa] subunit, putative n=1 Tax=Candida dubliniensis CD36 RepID=B9W6P5_CANDC Length = 124 Score = 55.8 bits (133), Expect = 2e-06 Identities = 28/63 (44%), Positives = 36/63 (57%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR QL KD VLFA YK+ HPL ++R+ T SP +A + + L ELD +KS F Sbjct: 46 LRAQLLKDERVLFAAYKVEHPLFANFVLRVQTEDDYSPREALQNACSSLISELDVIKSKF 105 Query: 402 EAE 394 E Sbjct: 106 NDE 108 [102][TOP] >UniRef100_C5FYD6 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Microsporum canis CBS 113480 RepID=C5FYD6_NANOT Length = 161 Score = 55.1 bits (131), Expect = 4e-06 Identities = 25/63 (39%), Positives = 40/63 (63%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R +L + +VLFAGYK+PHPL +K+++R+ T Q +P A + ++L K+L T F Sbjct: 79 IRARLLQSQHVLFAGYKIPHPLVHKVLLRVQTDGQITPKDAVLTACHELVKDLGTFSREF 138 Query: 402 EAE 394 E Sbjct: 139 TKE 141 [103][TOP] >UniRef100_A3FPR0 RNA polymerase II, putative n=1 Tax=Cryptosporidium parvum Iowa II RepID=A3FPR0_CRYPV Length = 115 Score = 54.7 bits (130), Expect = 5e-06 Identities = 24/64 (37%), Positives = 38/64 (59%) Frame = -1 Query: 573 QLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFEAE 394 QL +DPNV+FAGYK+PHPL+ + IRI T ++P A +I + E + + F+ Sbjct: 48 QLLRDPNVIFAGYKVPHPLEPLVQIRIQTRENTTPFVAIQNAIKSIQMESQVILNSFKDS 107 Query: 393 LLKF 382 + + Sbjct: 108 MRNY 111 [104][TOP] >UniRef100_Q1DQC2 DNA-directed RNA polymerase II n=1 Tax=Coccidioides immitis RepID=Q1DQC2_COCIM Length = 128 Score = 54.3 bits (129), Expect = 7e-06 Identities = 27/63 (42%), Positives = 38/63 (60%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL K +V FAGYK+PHPL +K I+R+ T +P A + ++L K+L TL F Sbjct: 46 IRAQLLKSQHVQFAGYKVPHPLVHKFILRVQTDGAITPKDAVLTACHELVKDLGTLSREF 105 Query: 402 EAE 394 E Sbjct: 106 TKE 108 [105][TOP] >UniRef100_C5PBJ9 RNA polymerase Rpb3/Rpb11 dimerization domain containing protein n=1 Tax=Coccidioides posadasii C735 delta SOWgp RepID=C5PBJ9_COCP7 Length = 128 Score = 54.3 bits (129), Expect = 7e-06 Identities = 27/63 (42%), Positives = 38/63 (60%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 +R QL K +V FAGYK+PHPL +K I+R+ T +P A + ++L K+L TL F Sbjct: 46 IRSQLLKSQHVQFAGYKVPHPLVHKFILRVQTDGAITPKDAVLTACHELVKDLGTLSREF 105 Query: 402 EAE 394 E Sbjct: 106 TKE 108 [106][TOP] >UniRef100_A1CD73 DNA-directed RNA polymerase II subunit RPB11a, putative n=1 Tax=Aspergillus clavatus RepID=A1CD73_ASPCL Length = 165 Score = 53.9 bits (128), Expect = 9e-06 Identities = 28/63 (44%), Positives = 38/63 (60%) Frame = -1 Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403 LR +L + P+VLFAGYK+PHPL K +RI T + +P A + +DL K+L L F Sbjct: 82 LRSRLLQSPHVLFAGYKIPHPLVPKFELRIQTDGEVTPKDALLAACHDLVKDLGILSREF 141 Query: 402 EAE 394 E Sbjct: 142 TKE 144