BB925065 ( RCE33835 )

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[1][TOP]
>UniRef100_B7FGH5 Putative uncharacterized protein n=1 Tax=Medicago truncatula
           RepID=B7FGH5_MEDTR
          Length = 116

 Score =  146 bits (368), Expect = 1e-33
 Identities = 71/71 (100%), Positives = 71/71 (100%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF
Sbjct: 46  LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 105

Query: 402 EAELLKFSKDY 370
           EAELLKFSKDY
Sbjct: 106 EAELLKFSKDY 116

[2][TOP]
>UniRef100_C6SW39 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6SW39_SOYBN
          Length = 116

 Score =  136 bits (342), Expect = 1e-30
 Identities = 63/71 (88%), Positives = 69/71 (97%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LRMQLH+DPNVLFAGYKLPHPLQYKII+RIHTTSQSSPMQAYNQS+NDLD+ELD LKS F
Sbjct: 46  LRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAF 105

Query: 402 EAELLKFSKDY 370
           EAE+LKFS+DY
Sbjct: 106 EAEMLKFSRDY 116

[3][TOP]
>UniRef100_A7P675 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7P675_VITVI
          Length = 116

 Score =  125 bits (315), Expect = 2e-27
 Identities = 60/71 (84%), Positives = 65/71 (91%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LRMQLH+D NVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQ+INDLDKELD LK+ F
Sbjct: 46  LRMQLHRDENVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAF 105

Query: 402 EAELLKFSKDY 370
           E EL K S++Y
Sbjct: 106 EVELAKHSREY 116

[4][TOP]
>UniRef100_A5BQX0 Putative uncharacterized protein n=1 Tax=Vitis vinifera
           RepID=A5BQX0_VITVI
          Length = 129

 Score =  125 bits (315), Expect = 2e-27
 Identities = 60/71 (84%), Positives = 65/71 (91%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LRMQLH+D NVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQ+INDLDKELD LK+ F
Sbjct: 59  LRMQLHRDENVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAF 118

Query: 402 EAELLKFSKDY 370
           E EL K S++Y
Sbjct: 119 EVELAKHSREY 129

[5][TOP]
>UniRef100_Q38859 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Arabidopsis
           thaliana RepID=RPB11_ARATH
          Length = 116

 Score =  120 bits (301), Expect = 8e-26
 Identities = 56/71 (78%), Positives = 65/71 (91%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +RMQLH+D NVLFAGY+LPHPL+YKII+RIHTTSQSSPMQAYNQ+INDLDKELD LK+ F
Sbjct: 46  VRMQLHRDENVLFAGYQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQF 105

Query: 402 EAELLKFSKDY 370
           EAE+ KFS  +
Sbjct: 106 EAEVAKFSNQF 116

[6][TOP]
>UniRef100_A9PCB4 Predicted protein n=1 Tax=Populus trichocarpa RepID=A9PCB4_POPTR
          Length = 116

 Score =  118 bits (296), Expect = 3e-25
 Identities = 56/64 (87%), Positives = 61/64 (95%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LRMQLH+D NVLFAGYKLPHPL+YKII+RIHTTSQSSPMQAYNQ+INDLDKELD LK+ F
Sbjct: 46  LRMQLHRDDNVLFAGYKLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAF 105

Query: 402 EAEL 391
           EAEL
Sbjct: 106 EAEL 109

[7][TOP]
>UniRef100_B9RVP3 DNA-directed RNA polymerase II 13.6 kD polypeptide, putative n=1
           Tax=Ricinus communis RepID=B9RVP3_RICCO
          Length = 156

 Score =  115 bits (287), Expect = 3e-24
 Identities = 54/61 (88%), Positives = 58/61 (95%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LRMQLH+D NVLFAGY+LPHPLQYKII+RIHTTSQSSPMQAYNQ+INDLDKELD LKS F
Sbjct: 46  LRMQLHRDENVLFAGYRLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSAF 105

Query: 402 E 400
           E
Sbjct: 106 E 106

[8][TOP]
>UniRef100_C5YC44 Putative uncharacterized protein Sb06g001360 n=1 Tax=Sorghum
           bicolor RepID=C5YC44_SORBI
          Length = 117

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/67 (77%), Positives = 60/67 (89%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +RMQLH+DPNVLFAGYKLPHPLQYKII+RIHTTSQSSP QAY+Q++NDLDKEL+ LK  F
Sbjct: 46  VRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPTQAYSQAVNDLDKELEYLKQAF 105

Query: 402 EAELLKF 382
           E E  +F
Sbjct: 106 EDEKNRF 112

[9][TOP]
>UniRef100_B4FJS1 DNA-directed RNA polymerase II subunit J n=1 Tax=Zea mays
           RepID=B4FJS1_MAIZE
          Length = 120

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/63 (84%), Positives = 57/63 (90%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LRMQLH+DPNVLFAGYKLPHPLQYKII+RIHTTSQSSP QAY Q+INDLDKEL+ LK  F
Sbjct: 46  LRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPTQAYTQAINDLDKELEYLKQAF 105

Query: 402 EAE 394
           E E
Sbjct: 106 EDE 108

[10][TOP]
>UniRef100_A9NN58 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NN58_PICSI
          Length = 120

 Score =  111 bits (277), Expect = 5e-23
 Identities = 51/70 (72%), Positives = 61/70 (87%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +RMQLH+DPNVLFAGYKLPHPLQYKI++RI TTSQSSPMQAYN +I+DLDKELD LK  F
Sbjct: 46  VRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTTSQSSPMQAYNLAIDDLDKELDHLKRSF 105

Query: 402 EAELLKFSKD 373
           E E+++   +
Sbjct: 106 EDEMVRLQSE 115

[11][TOP]
>UniRef100_C5X6I3 Putative uncharacterized protein Sb02g000210 n=1 Tax=Sorghum
           bicolor RepID=C5X6I3_SORBI
          Length = 120

 Score =  110 bits (276), Expect = 6e-23
 Identities = 51/69 (73%), Positives = 60/69 (86%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LRMQLH+DPNVLFAGYKLPHPLQYKII+RIHT SQSSP QAY+Q++NDLDKEL+ LK  F
Sbjct: 46  LRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTMSQSSPTQAYSQAVNDLDKELEYLKQAF 105

Query: 402 EAELLKFSK 376
           E E  ++ +
Sbjct: 106 EDEKNRYEE 114

[12][TOP]
>UniRef100_Q6ZA50 Os07g0172500 protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q6ZA50_ORYSJ
          Length = 120

 Score =  110 bits (275), Expect = 8e-23
 Identities = 48/69 (69%), Positives = 60/69 (86%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LRMQLH+DPNVLFAGYKLPHPLQYKI++R+HT +QS+P QAY Q+INDLDKEL+ LK  F
Sbjct: 46  LRMQLHRDPNVLFAGYKLPHPLQYKILVRVHTANQSTPTQAYTQAINDLDKELENLKQAF 105

Query: 402 EAELLKFSK 376
           E E +++ +
Sbjct: 106 EDEKIRYEE 114

[13][TOP]
>UniRef100_A3BH10 Putative uncharacterized protein n=2 Tax=Oryza sativa
           RepID=A3BH10_ORYSJ
          Length = 135

 Score =  110 bits (275), Expect = 8e-23
 Identities = 48/69 (69%), Positives = 60/69 (86%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LRMQLH+DPNVLFAGYKLPHPLQYKI++R+HT +QS+P QAY Q+INDLDKEL+ LK  F
Sbjct: 61  LRMQLHRDPNVLFAGYKLPHPLQYKILVRVHTANQSTPTQAYTQAINDLDKELENLKQAF 120

Query: 402 EAELLKFSK 376
           E E +++ +
Sbjct: 121 EDEKIRYEE 129

[14][TOP]
>UniRef100_A9RYQ0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RYQ0_PHYPA
          Length = 137

 Score =  103 bits (258), Expect = 8e-21
 Identities = 48/79 (60%), Positives = 61/79 (77%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LRMQLH+DP+VLFAGYKLPHPLQY+++++I T SQSSPMQAYN +I DL KELD LK+ F
Sbjct: 46  LRMQLHRDPSVLFAGYKLPHPLQYRVVVKIQTNSQSSPMQAYNLAITDLTKELDHLKATF 105

Query: 402 EAELLKFSKDY*LTTTVKM 346
           E  L++  K     T + +
Sbjct: 106 EVNLMQILKVLVFVTEISL 124

[15][TOP]
>UniRef100_A9RFS8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RFS8_PHYPA
          Length = 117

 Score =  102 bits (253), Expect = 3e-20
 Identities = 47/71 (66%), Positives = 59/71 (83%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +RMQLH+DP+VLFAGY+LPHPLQY+++++I TTSQSSPMQAYN +I DL KELD LK+ F
Sbjct: 46  IRMQLHRDPSVLFAGYRLPHPLQYRLVVKIQTTSQSSPMQAYNLAITDLIKELDHLKAVF 105

Query: 402 EAELLKFSKDY 370
           E E  +   DY
Sbjct: 106 EHETSQKQADY 116

[16][TOP]
>UniRef100_C6T5N7 Putative uncharacterized protein (Fragment) n=1 Tax=Glycine max
           RepID=C6T5N7_SOYBN
          Length = 130

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 38/54 (70%), Positives = 45/54 (83%)
 Frame = +1

Query: 421 IKFLVQIVDRLIICLHW*RLAGSVYPNNNFVLKRMRKFVSSK*HIGVFVKLHAQ 582
           IKF VQI++RL+ICLHW RL   VYP++NFVLKR+RK VS K HIGV VKLHA+
Sbjct: 2   IKFPVQIINRLVICLHWRRLTSGVYPDDNFVLKRVRKLVSGKQHIGVSVKLHAE 55

[17][TOP]
>UniRef100_C6TI25 Putative uncharacterized protein (Fragment) n=1 Tax=Glycine max
           RepID=C6TI25_SOYBN
          Length = 128

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/54 (70%), Positives = 44/54 (81%)
 Frame = +1

Query: 421 IKFLVQIVDRLIICLHW*RLAGSVYPNNNFVLKRMRKFVSSK*HIGVFVKLHAQ 582
           IKF VQI++RL+ICLHW RL   VYP+NNFVLKRMRK VS K  IGV V+LHA+
Sbjct: 2   IKFPVQIINRLVICLHWRRLTSGVYPDNNFVLKRMRKLVSGKQDIGVSVQLHAE 55

[18][TOP]
>UniRef100_UPI0000EB32C9 UPI0000EB32C9 related cluster n=1 Tax=Canis lupus familiaris
           RepID=UPI0000EB32C9
          Length = 129

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 35/66 (53%), Positives = 46/66 (69%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 59  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 118

Query: 402 EAELLK 385
              L+K
Sbjct: 119 RPSLVK 124

[19][TOP]
>UniRef100_C1EAB7 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299
           RepID=C1EAB7_9CHLO
          Length = 101

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 31/56 (55%), Positives = 44/56 (78%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTL 415
           +RMQLH+DPNV+FAGY++PHP   +I+I++HT   SSPMQA  +S+N L +E+  L
Sbjct: 46  VRMQLHRDPNVVFAGYQVPHPSDNRIVIKVHTNKNSSPMQAMTESVNCLSEEVSRL 101

[20][TOP]
>UniRef100_Q16IF1 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Aedes
           aegypti RepID=Q16IF1_AEDAE
          Length = 117

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 35/61 (57%), Positives = 44/61 (72%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDPNVLFAGYKLPHPL++K +IRI TTS  SP +A+  +I DL  EL   +  F
Sbjct: 46  IRNQLLKDPNVLFAGYKLPHPLEHKFVIRIQTTSDYSPQEAFMNAITDLLSELSLFEERF 105

Query: 402 E 400
           +
Sbjct: 106 K 106

[21][TOP]
>UniRef100_Q7PVQ9 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Anopheles
           gambiae RepID=RPB11_ANOGA
          Length = 117

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 37/70 (52%), Positives = 49/70 (70%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDPNVLFAGYKLPHPL++K ++RI TTS+ SP +A+  +I DL  EL   +  F
Sbjct: 46  IRNQLLKDPNVLFAGYKLPHPLEHKFVLRIQTTSEYSPHEAFMNAITDLLSELSLFEERF 105

Query: 402 EAELLKFSKD 373
             E +K  K+
Sbjct: 106 R-EAMKEKKE 114

[22][TOP]
>UniRef100_B3S6B1 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
           RepID=B3S6B1_TRIAD
          Length = 116

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 32/62 (51%), Positives = 46/62 (74%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDP V+FAGYK+PHPL+Y ++IR+ TTS  SP +A++ ++ DL  EL+ L   F
Sbjct: 46  IRAQLLKDPQVIFAGYKVPHPLEYDVVIRVQTTSNYSPEEAFSNALTDLISELNVLDDRF 105

Query: 402 EA 397
           +A
Sbjct: 106 KA 107

[23][TOP]
>UniRef100_B0WDB4 DNA-directed RNA polymerase II subunit J n=1 Tax=Culex
           quinquefasciatus RepID=B0WDB4_CULQU
          Length = 117

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 35/60 (58%), Positives = 43/60 (71%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDPNVLFAGYKLPHPL++K +IRI TTS  SP +A+  +I DL  EL   +  F
Sbjct: 46  IRNQLLKDPNVLFAGYKLPHPLEHKFVIRIQTTSDYSPQEAFMNAITDLLSELSLFEERF 105

[24][TOP]
>UniRef100_UPI0000D5702A PREDICTED: similar to DNA-directed RNA polymerase II 13.3 kDa
           polypeptide n=1 Tax=Tribolium castaneum
           RepID=UPI0000D5702A
          Length = 117

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 37/70 (52%), Positives = 48/70 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDPNVLFAGYK+PHPL++K ++RI TTS  SP +A   SI DL  EL   +  F
Sbjct: 46  IRNQLLKDPNVLFAGYKVPHPLEHKFVLRIQTTSDYSPQEALMNSITDLISELSLFEERF 105

Query: 402 EAELLKFSKD 373
           + E +K  K+
Sbjct: 106 K-EAIKEKKE 114

[25][TOP]
>UniRef100_UPI000020F7F2 DNA directed RNA polymerase II polypeptide J-related n=1 Tax=Homo
           sapiens RepID=UPI000020F7F2
          Length = 115

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 45  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104

Query: 402 EAELL 388
              LL
Sbjct: 105 RTCLL 109

[26][TOP]
>UniRef100_Q4TAB3 Chromosome undetermined SCAF7390, whole genome shotgun sequence n=1
           Tax=Tetraodon nigroviridis RepID=Q4TAB3_TETNG
          Length = 117

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDP VLFAGYK+PHPL++KI+IR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IRAQLMKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

Query: 402 EAEL 391
              +
Sbjct: 106 RVAI 109

[27][TOP]
>UniRef100_C1BLH2 DNA-directed RNA polymerase II subunit J n=1 Tax=Osmerus mordax
           RepID=C1BLH2_OSMMO
          Length = 117

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDP VLFAGYK+PHPL++KI+IR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IRSQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

Query: 402 EAEL 391
              +
Sbjct: 106 RVSI 109

[28][TOP]
>UniRef100_B5XEX2 DNA-directed RNA polymerase II subunit RPB11-a n=3 Tax=Euteleostei
           RepID=B5XEX2_SALSA
          Length = 117

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDP VLFAGYK+PHPL++KI+IR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IRQQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

Query: 402 EAEL 391
              +
Sbjct: 106 RVAI 109

[29][TOP]
>UniRef100_Q9H1A7 DNA-directed RNA polymerase II subunit RPB11-b2 n=1 Tax=Homo
           sapiens RepID=RPB1C_HUMAN
          Length = 115

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 45  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104

Query: 402 EAELL 388
              LL
Sbjct: 105 RTCLL 109

[30][TOP]
>UniRef100_Q9GZM3 DNA-directed RNA polymerase II subunit RPB11-b1 n=1 Tax=Homo
           sapiens RepID=RPB1B_HUMAN
          Length = 115

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 45  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104

Query: 402 EAELL 388
              LL
Sbjct: 105 RTCLL 109

[31][TOP]
>UniRef100_UPI000180BEE7 PREDICTED: similar to polymerase (RNA) II (DNA directed)
           polypeptide J n=1 Tax=Ciona intestinalis
           RepID=UPI000180BEE7
          Length = 117

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 33/62 (53%), Positives = 44/62 (70%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR QL KDP VLFAGYK+PHPL++K I+R+ TT   SP +A+  +I DL  E+  L+  F
Sbjct: 46  LRTQLLKDPKVLFAGYKVPHPLEHKFILRVQTTGDYSPQEAFTNAITDLISEISLLEERF 105

Query: 402 EA 397
           +A
Sbjct: 106 KA 107

[32][TOP]
>UniRef100_UPI0000019E7A UPI0000019E7A related cluster n=1 Tax=Takifugu rubripes
           RepID=UPI0000019E7A
          Length = 117

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDP VLFAGYK+PHPL++KI+IR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IRAQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

Query: 402 EAEL 391
              +
Sbjct: 106 RVAI 109

[33][TOP]
>UniRef100_C1BJJ1 DNA-directed RNA polymerase II subunit J n=1 Tax=Osmerus mordax
           RepID=C1BJJ1_OSMMO
          Length = 117

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDP VLFAGYK+PHPL++KI+IR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IRSQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

Query: 402 EAEL 391
              +
Sbjct: 106 RVAI 109

[34][TOP]
>UniRef100_Q4VBU5 Novel protein (Zgc:110005) n=1 Tax=Danio rerio RepID=Q4VBU5_DANRE
          Length = 117

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 32/64 (50%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDP VLFAGYK+PHPL++K++IR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IRSQLLKDPQVLFAGYKVPHPLEHKVVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

Query: 402 EAEL 391
              +
Sbjct: 106 RVAI 109

[35][TOP]
>UniRef100_Q59FR2 MGC13098 protein variant (Fragment) n=1 Tax=Homo sapiens
           RepID=Q59FR2_HUMAN
          Length = 180

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 33/60 (55%), Positives = 44/60 (73%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL +EL  L+  F
Sbjct: 67  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLIRELSLLEERF 126

[36][TOP]
>UniRef100_UPI000194D687 PREDICTED: putative DNA directed RNA polymerase II polypeptide J
           n=1 Tax=Taeniopygia guttata RepID=UPI000194D687
          Length = 113

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 42  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 101

Query: 402 EAEL 391
              +
Sbjct: 102 RVAI 105

[37][TOP]
>UniRef100_UPI0000E81348 PREDICTED: similar to Ras GTPase-activating protein 4
           (RasGAP-activating-like protein 2) (Calcium-promoted Ras
           inactivator) n=1 Tax=Gallus gallus RepID=UPI0000E81348
          Length = 763

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 692 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 751

Query: 402 EAEL 391
              +
Sbjct: 752 RVAI 755

[38][TOP]
>UniRef100_UPI0000E2167E PREDICTED: similar to RAS p21 protein activator 4, partial n=1
           Tax=Pan troglodytes RepID=UPI0000E2167E
          Length = 262

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 191 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 250

Query: 402 EAEL 391
              +
Sbjct: 251 RVAI 254

[39][TOP]
>UniRef100_UPI0000D9A6ED PREDICTED: similar to DNA-directed RNA polymerase II subunit J
           (DNA-directed RNA polymerase II 13.3 kDa polypeptide)
           (RPB11) n=1 Tax=Macaca mulatta RepID=UPI0000D9A6ED
          Length = 191

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 120 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 179

Query: 402 EAEL 391
              +
Sbjct: 180 RVAI 183

[40][TOP]
>UniRef100_UPI00005A0EE3 PREDICTED: similar to RAS p21 protein activator 4 n=1 Tax=Canis lupus
            familiaris RepID=UPI00005A0EE3
          Length = 1108

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 582  LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
            ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 1037 IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 1096

Query: 402  EAEL 391
               +
Sbjct: 1097 RVAI 1100

[41][TOP]
>UniRef100_UPI00003AB60B UPI00003AB60B related cluster n=1 Tax=Gallus gallus
           RepID=UPI00003AB60B
          Length = 100

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 29  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 88

Query: 402 EAEL 391
              +
Sbjct: 89  RVAI 92

[42][TOP]
>UniRef100_Q28CA5 Polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa n=1
           Tax=Xenopus (Silurana) tropicalis RepID=Q28CA5_XENTR
          Length = 117

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

Query: 402 EAEL 391
              +
Sbjct: 106 RVAI 109

[43][TOP]
>UniRef100_Q29MR4 GA19897 n=2 Tax=pseudoobscura subgroup RepID=Q29MR4_DROPS
          Length = 117

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 33/61 (54%), Positives = 45/61 (73%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDPNVLFAGYK+PHPL++K +IRI TT++ SP +A+  +I DL  EL   +  F
Sbjct: 46  IRNQLLKDPNVLFAGYKVPHPLEHKFVIRIQTTAEYSPQEAFMNAITDLLAELSLFEERF 105

Query: 402 E 400
           +
Sbjct: 106 K 106

[44][TOP]
>UniRef100_O08740 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Mus musculus
           RepID=RPB11_MOUSE
          Length = 117

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

Query: 402 EAEL 391
              +
Sbjct: 106 RGAI 109

[45][TOP]
>UniRef100_P52435 DNA-directed RNA polymerase II subunit RPB11-a n=5 Tax=Amniota
           RepID=RPB11_HUMAN
          Length = 117

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

Query: 402 EAEL 391
              +
Sbjct: 106 RVAI 109

[46][TOP]
>UniRef100_UPI0000E4A5EB PREDICTED: similar to RNA polymerase II subunit n=1
           Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A5EB
          Length = 117

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 31/70 (44%), Positives = 45/70 (64%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR QL KDP VLFAGYK+PHPL++K ++R+ TT   SP +A+  +I DL  E+  L+  F
Sbjct: 46  LRAQLLKDPQVLFAGYKVPHPLEHKFVLRVQTTPDYSPQEAFTNAITDLISEISLLEERF 105

Query: 402 EAELLKFSKD 373
               ++   +
Sbjct: 106 NVSSIRLDSE 115

[47][TOP]
>UniRef100_UPI0000E49F0F PREDICTED: similar to RNA polymerase II subunit, partial n=1
           Tax=Strongylocentrotus purpuratus RepID=UPI0000E49F0F
          Length = 99

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 31/70 (44%), Positives = 45/70 (64%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR QL KDP VLFAGYK+PHPL++K ++R+ TT   SP +A+  +I DL  E+  L+  F
Sbjct: 28  LRAQLLKDPQVLFAGYKVPHPLEHKFVLRVQTTPDYSPQEAFTNAITDLISEISLLEERF 87

Query: 402 EAELLKFSKD 373
               ++   +
Sbjct: 88  NVSSIRLDSE 97

[48][TOP]
>UniRef100_UPI0000E21685 PREDICTED: RAS p21 protein activator 4 isoform 2 n=1 Tax=Pan
           troglodytes RepID=UPI0000E21685
          Length = 576

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 463 IKTQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 522

[49][TOP]
>UniRef100_UPI00005EC058 PREDICTED: similar to RNA polymerase II isoform 2 n=1
           Tax=Monodelphis domestica RepID=UPI00005EC058
          Length = 128

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

[50][TOP]
>UniRef100_UPI00001F2CA1 polymerase (RNA) II (DNA directed) polypeptide J n=1 Tax=Mus
           musculus RepID=UPI00001F2CA1
          Length = 111

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

[51][TOP]
>UniRef100_UPI0001AE70B6 UPI0001AE70B6 related cluster n=1 Tax=Homo sapiens
           RepID=UPI0001AE70B6
          Length = 180

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 67  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 126

[52][TOP]
>UniRef100_UPI0000163C17 UPI0000163C17 related cluster n=1 Tax=Homo sapiens
           RepID=UPI0000163C17
          Length = 158

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 45  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104

[53][TOP]
>UniRef100_Q5M778 LOC496260 protein n=1 Tax=Xenopus laevis RepID=Q5M778_XENLA
          Length = 117

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 32/64 (50%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KI+IR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IKSQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

Query: 402 EAEL 391
              +
Sbjct: 106 RVAI 109

[54][TOP]
>UniRef100_Q9H1A6 RPB11a protein n=1 Tax=Homo sapiens RepID=Q9H1A6_HUMAN
          Length = 127

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

[55][TOP]
>UniRef100_Q8TDE6 DNA-directed RNA polymerase II subunit 11 n=1 Tax=Homo sapiens
           RepID=Q8TDE6_HUMAN
          Length = 158

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 45  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104

[56][TOP]
>UniRef100_A6NK79 Putative uncharacterized protein POLR2J n=1 Tax=Homo sapiens
           RepID=A6NK79_HUMAN
          Length = 116

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

[57][TOP]
>UniRef100_A6NFM0 Putative uncharacterized protein POLR2J2 n=1 Tax=Homo sapiens
           RepID=A6NFM0_HUMAN
          Length = 158

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 45  IKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 104

[58][TOP]
>UniRef100_UPI000194D688 PREDICTED: similar to DNA directed RNA polymerase II polypeptide J
           n=1 Tax=Taeniopygia guttata RepID=UPI000194D688
          Length = 137

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 33/62 (53%), Positives = 43/62 (69%)
 Frame = -1

Query: 576 MQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFEA 397
           +QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F  
Sbjct: 68  VQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRV 127

Query: 396 EL 391
            +
Sbjct: 128 AI 129

[59][TOP]
>UniRef100_UPI0000F4F017 polymerase (RNA) II (DNA directed) polypeptide J n=1 Tax=Mus
           musculus RepID=UPI0000F4F017
          Length = 87

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 33/63 (52%), Positives = 43/63 (68%)
 Frame = -1

Query: 579 RMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFE 400
           + QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F 
Sbjct: 17  KKQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFR 76

Query: 399 AEL 391
             +
Sbjct: 77  VAI 79

[60][TOP]
>UniRef100_Q9VJE4 DNA-directed RNA polymerase II subunit RPB11 n=9 Tax=Drosophila
           RepID=RPB11_DROME
          Length = 117

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 33/61 (54%), Positives = 44/61 (72%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDPNVLFAGYK+PHPL++K +IRI TT+  SP +A+  +I DL  EL   +  F
Sbjct: 46  IRNQLLKDPNVLFAGYKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLFEERF 105

Query: 402 E 400
           +
Sbjct: 106 K 106

[61][TOP]
>UniRef100_UPI00015B4993 PREDICTED: similar to DNA-directed RNA polymerase II 13.3 kDa
           polypeptide n=1 Tax=Nasonia vitripennis
           RepID=UPI00015B4993
          Length = 117

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 35/70 (50%), Positives = 48/70 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDP VLFAGYKLPHPL++K +IRI TTS  +P +A+  ++ DL  EL   +  F
Sbjct: 46  IRNQLLKDPQVLFAGYKLPHPLEHKFVIRIQTTSDHTPHEAFMNAVTDLIAELSLFEERF 105

Query: 402 EAELLKFSKD 373
           + E +K  K+
Sbjct: 106 K-EAIKEKKE 114

[62][TOP]
>UniRef100_B7PS85 RNA polymerases L, putative n=1 Tax=Ixodes scapularis
           RepID=B7PS85_IXOSC
          Length = 117

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 32/61 (52%), Positives = 44/61 (72%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDP VLFAGYK+PHPL++K I+R+ TT  S+P +A+  +I DL  EL  L+  F
Sbjct: 46  IRAQLLKDPCVLFAGYKVPHPLEHKFILRVQTTPDSTPQEAFTNAITDLISELSLLEERF 105

Query: 402 E 400
           +
Sbjct: 106 K 106

[63][TOP]
>UniRef100_Q3TYI2 Putative uncharacterized protein n=1 Tax=Mus musculus
           RepID=Q3TYI2_MOUSE
          Length = 117

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 32/64 (50%), Positives = 43/64 (67%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLF GYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IKSQLLKDPQVLFVGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

Query: 402 EAEL 391
              +
Sbjct: 106 RVAI 109

[64][TOP]
>UniRef100_C9JYL5 Putative uncharacterized protein POLR2J3 n=1 Tax=Homo sapiens
           RepID=C9JYL5_HUMAN
          Length = 128

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 33/57 (57%), Positives = 41/57 (71%)
 Frame = -1

Query: 573 QLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           QL KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 18  QLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 74

[65][TOP]
>UniRef100_UPI000051A5CD PREDICTED: similar to DNA-directed RNA polymerase II subunit J
           (DNA-directed RNA polymerase II 13.3 kDa polypeptide)
           (RPB11) n=1 Tax=Apis mellifera RepID=UPI000051A5CD
          Length = 117

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 35/70 (50%), Positives = 48/70 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDP VLFAGYK+PHPL++K +IRI TTS  +P +A+  +I DL  EL   +  F
Sbjct: 46  IRNQLLKDPQVLFAGYKVPHPLEHKFVIRIQTTSDYTPHEAFMHAITDLIAELSLFEERF 105

Query: 402 EAELLKFSKD 373
           + E +K  K+
Sbjct: 106 K-EAIKEKKE 114

[66][TOP]
>UniRef100_UPI000013CAF5 UPI000013CAF5 related cluster n=1 Tax=Homo sapiens
           RepID=UPI000013CAF5
          Length = 117

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 33/59 (55%), Positives = 41/59 (69%)
 Frame = -1

Query: 564 KDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFEAELL 388
           KDP VLFAGYK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F   LL
Sbjct: 53  KDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRTCLL 111

[67][TOP]
>UniRef100_C6K0C3 Putative DNA-directed RNA polymerase II subunit J (Fragment) n=9
           Tax=Pyretophorus RepID=C6K0C3_ANOAR
          Length = 85

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 32/52 (61%), Positives = 41/52 (78%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKE 427
           +R QL KDPNVLFAGYKLPHPL++K ++RI TTS+ SP +A+  +I DL  E
Sbjct: 34  IRNQLLKDPNVLFAGYKLPHPLEHKFVLRIQTTSEYSPHEAFMNAITDLLSE 85

[68][TOP]
>UniRef100_UPI000186CAF7 DNA-directed RNA polymerase II subunit J, putative n=1
           Tax=Pediculus humanus corporis RepID=UPI000186CAF7
          Length = 117

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/70 (50%), Positives = 47/70 (67%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDPNVLFAGYK+PHPL++K ++RI TTS  +P  A   +I DL  EL   +  F
Sbjct: 46  IRDQLLKDPNVLFAGYKVPHPLEHKFVLRIQTTSDYTPQDALMNAITDLLSELSLFEERF 105

Query: 402 EAELLKFSKD 373
           + E +K  K+
Sbjct: 106 K-EAIKEKKE 114

[69][TOP]
>UniRef100_Q8IH32 GM15177p n=1 Tax=Drosophila melanogaster RepID=Q8IH32_DROME
          Length = 136

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/58 (55%), Positives = 42/58 (72%)
 Frame = -1

Query: 573 QLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFE 400
           QL KDPNVLFAGYK+PHPL++K +IRI TT+  SP +A+  +I DL  EL   +  F+
Sbjct: 68  QLLKDPNVLFAGYKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLFEERFK 125

[70][TOP]
>UniRef100_C6K0F4 Putative DNA-directed RNA polymerase II subunit J (Fragment) n=1
           Tax=Anopheles gambiae RepID=C6K0F4_ANOGA
          Length = 79

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/52 (61%), Positives = 41/52 (78%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKE 427
           +R QL KDPNVLFAGYKLPHPL++K ++RI TTS+ SP +A+  +I DL  E
Sbjct: 28  IRNQLLKDPNVLFAGYKLPHPLEHKFVLRIQTTSEYSPHEAFMXAITDLLSE 79

[71][TOP]
>UniRef100_A9V2R7 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V2R7_MONBE
          Length = 119

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/64 (48%), Positives = 47/64 (73%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           L  QL KDP VLFAGYK+PHPL++ I++R+HTT+Q SP +A  Q+++D+  ++  L+S  
Sbjct: 46  LASQLAKDPRVLFAGYKVPHPLEHYILLRVHTTAQYSPKEALKQALHDVIYDVAHLQSSL 105

Query: 402 EAEL 391
             +L
Sbjct: 106 REQL 109

[72][TOP]
>UniRef100_A7SGE2 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SGE2_NEMVE
          Length = 117

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/62 (50%), Positives = 44/62 (70%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR QL KDP V+FAGYK+ HPL++K ++R+ TTS  SP +A+  +I DL  E+  L+  F
Sbjct: 46  LREQLLKDPQVIFAGYKVSHPLEHKFVLRVQTTSDYSPQEAFTHAITDLISEVSLLEERF 105

Query: 402 EA 397
           +A
Sbjct: 106 KA 107

[73][TOP]
>UniRef100_UPI0001868C2E hypothetical protein BRAFLDRAFT_286064 n=1 Tax=Branchiostoma
           floridae RepID=UPI0001868C2E
          Length = 116

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 30/61 (49%), Positives = 43/61 (70%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR QL KDP V+FAGYK+PHPL++K ++R+ TT   SP +A+  +I DL  E+  L+  F
Sbjct: 46  LRAQLLKDPQVIFAGYKVPHPLEHKFVLRLQTTPDYSPQEAFTNAITDLISEVSLLEERF 105

Query: 402 E 400
           +
Sbjct: 106 K 106

[74][TOP]
>UniRef100_C1BF62 DNA-directed RNA polymerase II subunit J n=1 Tax=Oncorhynchus
           mykiss RepID=C1BF62_ONCMY
          Length = 117

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 31/64 (48%), Positives = 42/64 (65%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL++K +IR+ TT   SP +A+   I DL  EL  L+  F
Sbjct: 46  IKQQLLKDPQVLFAGYKVPHPLEHKTVIRVQTTPDYSPQEAFTNVITDLISELSLLEERF 105

Query: 402 EAEL 391
              +
Sbjct: 106 RVAI 109

[75][TOP]
>UniRef100_Q69G41 RNA polymerase II subunit n=1 Tax=Branchiostoma belcheri
           RepID=Q69G41_BRABE
          Length = 135

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 30/60 (50%), Positives = 42/60 (70%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR QL KDP V+FAGYK+PHPL++K ++R+ TT   SP +A+  +I DL  E+  L+  F
Sbjct: 46  LRAQLLKDPQVIFAGYKVPHPLEHKFVLRVQTTPDYSPQEAFTNAITDLISEVSLLEERF 105

[76][TOP]
>UniRef100_C3YY41 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
           RepID=C3YY41_BRAFL
          Length = 117

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 29/61 (47%), Positives = 43/61 (70%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDP V+FAGYK+PHPL++K ++R+ TT   SP +A+  +I DL  E+  L+  F
Sbjct: 47  IRQQLLKDPQVIFAGYKVPHPLEHKFVLRLQTTPDYSPQEAFTNAITDLISEVSLLEERF 106

Query: 402 E 400
           +
Sbjct: 107 K 107

[77][TOP]
>UniRef100_Q9XVH6 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
           Tax=Caenorhabditis elegans RepID=RPB11_CAEEL
          Length = 122

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 33/66 (50%), Positives = 46/66 (69%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           L++QL KDP VLFAGYK PHPL++KI++RI TT+ ++P  A   +I DL  EL  L+   
Sbjct: 45  LKIQLLKDPEVLFAGYKNPHPLEHKILLRIQTTNNTTPADALTTAITDLVGELSLLEHRI 104

Query: 402 EAELLK 385
           +A + K
Sbjct: 105 DAAIKK 110

[78][TOP]
>UniRef100_UPI0001923CF4 PREDICTED: similar to predicted protein n=1 Tax=Hydra
           magnipapillata RepID=UPI0001923CF4
          Length = 117

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 33/70 (47%), Positives = 47/70 (67%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDP V+FAGY++PHPL++K  +RI TT   SP +A+  +I DL  E+  L+  F
Sbjct: 46  IRSQLLKDPQVIFAGYRVPHPLEHKFNVRIQTTPDYSPQEAFTSAITDLLSEISLLEERF 105

Query: 402 EAELLKFSKD 373
           ++  LK  KD
Sbjct: 106 KS-ALKEKKD 114

[79][TOP]
>UniRef100_A4S056 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4S056_OSTLU
          Length = 115

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 27/64 (42%), Positives = 46/64 (71%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LRM+LHK+P+V+FAGYK PHP  ++I++++HT + ++P+QA   ++ +L  E+  L   F
Sbjct: 46  LRMELHKNPDVVFAGYKNPHPTDHRIVLKVHTNANTTPVQALRDAVTNLRAEVGDLSQQF 105

Query: 402 EAEL 391
             E+
Sbjct: 106 ADEI 109

[80][TOP]
>UniRef100_C4WRJ5 ACYPI008208 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WRJ5_ACYPI
          Length = 117

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 34/64 (53%), Positives = 41/64 (64%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDPNVLFAGYK PHPL++K  +RI TTS  +P  A   SI DL  EL   +  F
Sbjct: 46  IRNQLLKDPNVLFAGYKQPHPLEHKFELRIQTTSDYTPQDALTNSITDLLAELSLFEERF 105

Query: 402 EAEL 391
           +  L
Sbjct: 106 KEAL 109

[81][TOP]
>UniRef100_Q60SM4 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
           Tax=Caenorhabditis briggsae RepID=RPB11_CAEBR
          Length = 122

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/66 (46%), Positives = 46/66 (69%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           L++QL KDP VLFAGYK PHPL++KI++R+ TT+ ++P  A   +I DL  EL  L+   
Sbjct: 45  LKIQLLKDPEVLFAGYKNPHPLEHKILLRVQTTNATTPADALTTAITDLVGELSLLEHRI 104

Query: 402 EAELLK 385
           ++ + K
Sbjct: 105 DSAIKK 110

[82][TOP]
>UniRef100_C4Q8A9 DNA-directed rna polymerase II 13.3 kD polypeptide, putative n=1
           Tax=Schistosoma mansoni RepID=C4Q8A9_SCHMA
          Length = 110

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 27/57 (47%), Positives = 40/57 (70%)
 Frame = -1

Query: 573 QLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           QL KDP VLFAGYK PHPL++KI+IR+HT   ++P+  +  ++ DL  E+  ++  F
Sbjct: 49  QLLKDPRVLFAGYKAPHPLEHKIVIRVHTAHPATPVDVFVSALKDLISEISNIEEQF 105

[83][TOP]
>UniRef100_UPI000155D3C2 PREDICTED: similar to RNA polymerase II n=1 Tax=Ornithorhynchus
           anatinus RepID=UPI000155D3C2
          Length = 117

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 30/64 (46%), Positives = 41/64 (64%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VL   YK+PHPL++KIIIR+ TT   SP +A+  +I DL  EL  L+  F
Sbjct: 46  IKSQLLKDPQVLLQEYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERF 105

Query: 402 EAEL 391
              +
Sbjct: 106 RVAI 109

[84][TOP]
>UniRef100_A6YPS3 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1
           Tax=Triatoma infestans RepID=A6YPS3_TRIIF
          Length = 117

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 33/70 (47%), Positives = 43/70 (61%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL KDP VLFAGYK+PHPL  K +IRI TT+  +P      +I DL  EL   +  F
Sbjct: 46  IRNQLLKDPKVLFAGYKVPHPLDPKFVIRIQTTNDETPQSVLKNAITDLISELSLFEERF 105

Query: 402 EAELLKFSKD 373
           + E +K  K+
Sbjct: 106 K-EAIKDKKE 114

[85][TOP]
>UniRef100_B4I598 GM17133 n=1 Tax=Drosophila sechellia RepID=B4I598_DROSE
          Length = 105

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 29/49 (59%), Positives = 38/49 (77%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDL 436
           +R QL KD NVLFAGYK+PHPL++K +IRI TT+  SP +A+  +I DL
Sbjct: 46  IRNQLLKDHNVLFAGYKVPHPLEHKFVIRIQTTADYSPQEAFMNAITDL 94

[86][TOP]
>UniRef100_A8PTP7 RNA polymerase II., putative n=1 Tax=Brugia malayi
           RepID=A8PTP7_BRUMA
          Length = 133

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 30/57 (52%), Positives = 38/57 (66%)
 Frame = -1

Query: 573 QLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           QL KDP VLFAGYK PHPL++K I+R+ TTS ++P  A   +I DL  EL   +  F
Sbjct: 65  QLLKDPQVLFAGYKCPHPLEHKFILRVQTTSDTTPEDALTSAITDLMAELSLFEERF 121

[87][TOP]
>UniRef100_UPI0000E21436 PREDICTED: similar to MGC13098 protein n=1 Tax=Pan troglodytes
           RepID=UPI0000E21436
          Length = 398

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 32/60 (53%), Positives = 39/60 (65%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           ++ QL KDP VLFAGYK+PHPL+ KIII   TT   SP +A   +I DL  EL  L+  F
Sbjct: 285 IKSQLLKDPQVLFAGYKVPHPLERKIIIEXQTTPDYSPQEALPNAIADLISELSLLEERF 344

[88][TOP]
>UniRef100_UPI0001792BF8 PREDICTED: similar to GA19897-PA n=1 Tax=Acyrthosiphon pisum
           RepID=UPI0001792BF8
          Length = 119

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTT-SQSSPMQAYNQSINDLDKELDTLKSG 406
           +R QL KDPNVLFAGYKLPHPL++K  +RI T+  + +P  A   S+ DL  EL   +  
Sbjct: 46  IRNQLLKDPNVLFAGYKLPHPLEHKFELRIQTSCPEYTPQDALTNSLTDLLAELSLFEER 105

Query: 405 FEAELLKFSKD 373
           F+ + LK  KD
Sbjct: 106 FK-DALKQKKD 115

[89][TOP]
>UniRef100_Q01GZ2 RPB11_CAEEL Probable DNA-directed RNA polymerase II 13.3 kDa
           polypeptide (ISS) n=1 Tax=Ostreococcus tauri
           RepID=Q01GZ2_OSTTA
          Length = 230

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 23/61 (37%), Positives = 43/61 (70%)
 Frame = -1

Query: 573 QLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFEAE 394
           +LHK+P+V+FAGYK PHP  +++I+++HT + ++P+QA   ++ +L  E+  +   F  E
Sbjct: 20  ELHKNPDVVFAGYKNPHPTDHRVILKVHTNANTTPVQALRDAVTNLRAEVSDIAQQFADE 79

Query: 393 L 391
           +
Sbjct: 80  I 80

[90][TOP]
>UniRef100_Q86JJ5 DNA-directed RNA polymerase II subunit rpb11 n=1 Tax=Dictyostelium
           discoideum RepID=RPB11_DICDI
          Length = 120

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 24/66 (36%), Positives = 46/66 (69%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +RMQL  D +++FAGY++PHPL++ + IRI T + ++P++   +S+  L +E  +L++ F
Sbjct: 46  IRMQLIADQDIIFAGYRMPHPLEHNVNIRIQTNNNTNPLECVQKSMECLSREFTSLENSF 105

Query: 402 EAELLK 385
             ++ K
Sbjct: 106 IEQVQK 111

[91][TOP]
>UniRef100_Q5KMB4 DNA-directed RNA polymerase ii 13.3 kDa polypeptide, putative n=1
           Tax=Filobasidiella neoformans RepID=Q5KMB4_CRYNE
          Length = 162

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 26/63 (41%), Positives = 44/63 (69%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR QL  DP VLFAGYK+PHPL+  I+++I T  +S+P +A  ++ ++L ++   +K+ F
Sbjct: 46  LRAQLMLDPTVLFAGYKVPHPLENDILLKIQTDERSNPAEALKRACHELIRQTVHIKAQF 105

Query: 402 EAE 394
           + +
Sbjct: 106 QQQ 108

[92][TOP]
>UniRef100_C4LXS9 RNA polymerases II subunit, putative n=1 Tax=Entamoeba histolytica
           HM-1:IMSS RepID=C4LXS9_ENTHI
          Length = 112

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 27/62 (43%), Positives = 43/62 (69%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR+ L ++P+VLFAGY+ PHPL Y I + I T    +P QA  Q+++D+  E++ +++ F
Sbjct: 43  LRVMLLRNPHVLFAGYRQPHPLNYVIEMTIRTDMTITPKQALEQAMDDVIHEIEIMQNEF 102

Query: 402 EA 397
           EA
Sbjct: 103 EA 104

[93][TOP]
>UniRef100_C5LKR8 DNA-directed RNA polymerase II, putative n=1 Tax=Perkinsus marinus
           ATCC 50983 RepID=C5LKR8_9ALVE
          Length = 149

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 25/64 (39%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR +L ++  V FAGYK+PHPL+ K+++R+  TSQ++P++A  +++  L  + D L+  F
Sbjct: 63  LRSELLRNRQVKFAGYKVPHPLENKLLMRVQVTSQTTPVEAMKEALKSLRSKGDQLEKEF 122

Query: 402 EAEL 391
           +  L
Sbjct: 123 DRSL 126

[94][TOP]
>UniRef100_C5KDT1 DNA-directed RNA polymerase II, putative n=1 Tax=Perkinsus marinus
           ATCC 50983 RepID=C5KDT1_9ALVE
          Length = 149

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 25/64 (39%), Positives = 44/64 (68%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR +L ++  V FAGYK+PHPL+ K+++R+  TSQ++P++A  +++  L  + D L+  F
Sbjct: 63  LRSELLRNRQVKFAGYKVPHPLENKLLMRVQVTSQTTPVEAMKEALKSLRSKGDQLEKEF 122

Query: 402 EAEL 391
           +  L
Sbjct: 123 DRSL 126

[95][TOP]
>UniRef100_A3LX93 RNA polymerase II core subunit n=1 Tax=Pichia stipitis
           RepID=A3LX93_PICST
          Length = 122

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 29/63 (46%), Positives = 38/63 (60%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR QL KDP VLFA YK+ HPL    ++RI T    SP +A   + + L  ELD +K+ F
Sbjct: 46  LRAQLLKDPRVLFAAYKVEHPLFANFVLRIQTEDDYSPREALKNACSGLISELDVIKNRF 105

Query: 402 EAE 394
           + E
Sbjct: 106 KDE 108

[96][TOP]
>UniRef100_B0E866 DNA-directed RNA polymerase II subunit RPB11, putative n=1
           Tax=Entamoeba dispar SAW760 RepID=B0E866_ENTDI
          Length = 112

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 26/62 (41%), Positives = 44/62 (70%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR+ L ++P+VLFAGY+ PHPL Y I + I T +  +P QA  Q+++D+  E++ +++ F
Sbjct: 43  LRVMLLRNPHVLFAGYRQPHPLNYIIEMTIRTDTTITPKQALEQAMDDVIHEIEIMQNEF 102

Query: 402 EA 397
           E+
Sbjct: 103 ES 104

[97][TOP]
>UniRef100_B6K818 DNA-directed RNA polymerase II complex subunit Rpb11 n=1
           Tax=Schizosaccharomyces japonicus yFS275
           RepID=B6K818_SCHJY
          Length = 123

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR QL  D  V+FAGY++PHPL +  I+R+ TT + SP QA   +   L   L+ LK  F
Sbjct: 45  LRTQLLYDERVVFAGYRVPHPLNHNFILRVQTTEECSPKQAIIDASKSLITVLEQLKVNF 104

Query: 402 --EAELLKFSKD 373
             E EL K S +
Sbjct: 105 TREWELKKISDE 116

[98][TOP]
>UniRef100_B8C993 Probable dna-directed RNA polymerase II 13.6 kDa polypeptide n=1
           Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C993_THAPS
          Length = 124

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIH-TTSQSSPMQAYNQSINDLDKELDTLKSG 406
           LRMQL +DP V FAGY  PHPL +KI ++I  TTSQ +P +  + +I DL  E D L + 
Sbjct: 46  LRMQLLRDPAVKFAGYMHPHPLIHKIHLKIQTTTSQVAPAETLSAAIEDLSNETDHLLTQ 105

Query: 405 FEAELLKFSKD 373
               + K+ K+
Sbjct: 106 VTDAIDKWKKE 116

[99][TOP]
>UniRef100_A5DVI5 DNA-directed RNA polymerase II 13.6 kDa polypeptide n=1
           Tax=Lodderomyces elongisporus RepID=A5DVI5_LODEL
          Length = 121

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR QL KDP V+FA YK+ HPL    ++RI T    +P +A   + N L  EL  +KS F
Sbjct: 46  LRAQLLKDPRVIFAAYKVEHPLFANFVLRIQTEEDYTPKEALKNACNMLINELGAIKSKF 105

Query: 402 EAE-----LLKFSKDY 370
             E     LL    DY
Sbjct: 106 SEEWALKVLLNNEDDY 121

[100][TOP]
>UniRef100_C4YFG3 DNA-directed RNA polymerase II 13.6 kDa polypeptide n=1 Tax=Candida
           albicans RepID=C4YFG3_CANAL
          Length = 124

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 29/63 (46%), Positives = 36/63 (57%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR QL KD  VLFA YK+ HPL    ++RI T    SP +A   + + L  ELD +KS F
Sbjct: 46  LRAQLLKDDRVLFAAYKVEHPLFANFVLRIQTEDDYSPREALQNACSGLISELDVIKSKF 105

Query: 402 EAE 394
             E
Sbjct: 106 NDE 108

[101][TOP]
>UniRef100_B9W6P5 DNA-directed RNA polymerase II [13.6 kDa] subunit, putative n=1
           Tax=Candida dubliniensis CD36 RepID=B9W6P5_CANDC
          Length = 124

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 36/63 (57%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR QL KD  VLFA YK+ HPL    ++R+ T    SP +A   + + L  ELD +KS F
Sbjct: 46  LRAQLLKDERVLFAAYKVEHPLFANFVLRVQTEDDYSPREALQNACSSLISELDVIKSKF 105

Query: 402 EAE 394
             E
Sbjct: 106 NDE 108

[102][TOP]
>UniRef100_C5FYD6 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Microsporum
           canis CBS 113480 RepID=C5FYD6_NANOT
          Length = 161

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 25/63 (39%), Positives = 40/63 (63%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R +L +  +VLFAGYK+PHPL +K+++R+ T  Q +P  A   + ++L K+L T    F
Sbjct: 79  IRARLLQSQHVLFAGYKIPHPLVHKVLLRVQTDGQITPKDAVLTACHELVKDLGTFSREF 138

Query: 402 EAE 394
             E
Sbjct: 139 TKE 141

[103][TOP]
>UniRef100_A3FPR0 RNA polymerase II, putative n=1 Tax=Cryptosporidium parvum Iowa II
           RepID=A3FPR0_CRYPV
          Length = 115

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 24/64 (37%), Positives = 38/64 (59%)
 Frame = -1

Query: 573 QLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFEAE 394
           QL +DPNV+FAGYK+PHPL+  + IRI T   ++P  A   +I  +  E   + + F+  
Sbjct: 48  QLLRDPNVIFAGYKVPHPLEPLVQIRIQTRENTTPFVAIQNAIKSIQMESQVILNSFKDS 107

Query: 393 LLKF 382
           +  +
Sbjct: 108 MRNY 111

[104][TOP]
>UniRef100_Q1DQC2 DNA-directed RNA polymerase II n=1 Tax=Coccidioides immitis
           RepID=Q1DQC2_COCIM
          Length = 128

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL K  +V FAGYK+PHPL +K I+R+ T    +P  A   + ++L K+L TL   F
Sbjct: 46  IRAQLLKSQHVQFAGYKVPHPLVHKFILRVQTDGAITPKDAVLTACHELVKDLGTLSREF 105

Query: 402 EAE 394
             E
Sbjct: 106 TKE 108

[105][TOP]
>UniRef100_C5PBJ9 RNA polymerase Rpb3/Rpb11 dimerization domain containing protein
           n=1 Tax=Coccidioides posadasii C735 delta SOWgp
           RepID=C5PBJ9_COCP7
          Length = 128

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           +R QL K  +V FAGYK+PHPL +K I+R+ T    +P  A   + ++L K+L TL   F
Sbjct: 46  IRSQLLKSQHVQFAGYKVPHPLVHKFILRVQTDGAITPKDAVLTACHELVKDLGTLSREF 105

Query: 402 EAE 394
             E
Sbjct: 106 TKE 108

[106][TOP]
>UniRef100_A1CD73 DNA-directed RNA polymerase II subunit RPB11a, putative n=1
           Tax=Aspergillus clavatus RepID=A1CD73_ASPCL
          Length = 165

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 28/63 (44%), Positives = 38/63 (60%)
 Frame = -1

Query: 582 LRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGF 403
           LR +L + P+VLFAGYK+PHPL  K  +RI T  + +P  A   + +DL K+L  L   F
Sbjct: 82  LRSRLLQSPHVLFAGYKIPHPLVPKFELRIQTDGEVTPKDALLAACHDLVKDLGILSREF 141

Query: 402 EAE 394
             E
Sbjct: 142 TKE 144