[UP]
[1][TOP]
>UniRef100_Q99367 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99367_SOYBN
Length = 494
Score = 152 bits (385), Expect = 1e-35
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG SPDYSPSSPQFSPSTGYSPSQPGYSPSS
Sbjct: 418 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPSS 477
Query: 385 TSQYTPKTNDNKDDPGTK 332
TSQYTP+T+D KDD GT+
Sbjct: 478 TSQYTPQTSD-KDDGGTR 494
Score = 99.4 bits (246), Expect = 2e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S GYSP+ P YSP+
Sbjct: 315 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 374
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 375 SPS-YSP 380
Score = 98.6 bits (244), Expect = 3e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ PGYSP+
Sbjct: 308 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPT 367
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 368 SPS-YSP 373
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 266 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPT 325
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 326 SPS-YSP 331
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 287 YSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 346
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 347 SPS-YSP 352
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 259 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPT 318
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 319 SPS-YSP 324
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 231 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 290
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 291 SPS-YSP 296
Score = 92.0 bits (227), Expect = 3e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP+SP YSP+SP YSP+SP YSP+SP S TSP YSP+SP +SPS+ GYSP+ P YSP+
Sbjct: 210 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 269
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 270 SPS-YSP 275
Score = 92.0 bits (227), Expect = 3e-17
Identities = 43/67 (64%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 252 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 311
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 312 SPA-YSP 317
Score = 91.7 bits (226), Expect = 4e-17
Identities = 43/66 (65%), Positives = 51/66 (77%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+P S ++SPS YSPS P SPS
Sbjct: 350 YSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPS- 408
Query: 385 TSQYTP 368
S Y+P
Sbjct: 409 -SPYSP 413
Score = 91.3 bits (225), Expect = 5e-17
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+
Sbjct: 217 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 276
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 277 SPS-YSP 282
Score = 89.0 bits (219), Expect = 2e-16
Identities = 44/69 (63%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S Y+P YSPS
Sbjct: 336 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 395
Query: 388 STSQYTPKT 362
Y+P +
Sbjct: 396 LA--YSPSS 402
Score = 86.7 bits (213), Expect = 1e-15
Identities = 45/68 (66%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
+SPTS P YSP+SP YSPSSP YSP+SP S TSP YSP+SP +SP S YSPS PGYSP
Sbjct: 202 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 261
Query: 391 SSTSQYTP 368
+S + Y+P
Sbjct: 262 TSPA-YSP 268
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 273 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 332
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 333 SPSYSPTSPS-YSP 345
Score = 82.0 bits (201), Expect = 3e-14
Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 238 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 297
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 298 SPSYSPTSPA-YSP 310
Score = 58.9 bits (141), Expect = 3e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = -3
Query: 547 SYSPTS-PSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYT 371
++SPTS P YSPSSP YSPSSP YSP+SP GYSP+ PGYSP+S
Sbjct: 201 AFSPTSSPGYSPSSPGYSPSSP-------GYSPTSP------GYSPTSPGYSPTSPGYSP 247
Query: 370 PKTNDNKDDPG 338
+ PG
Sbjct: 248 TSPTYSPSSPG 258
[2][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99368_SOYBN
Length = 977
Score = 140 bits (352), Expect = 9e-32
Identities = 64/73 (87%), Positives = 68/73 (93%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG SPDYSP+SPQFSPS GYSPSQPGYSPSS
Sbjct: 905 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPTSPQFSPSAGYSPSQPGYSPSS 964
Query: 385 TSQYTPKTNDNKD 347
TSQ TP+T+D +
Sbjct: 965 TSQDTPQTSDKDE 977
Score = 92.4 bits (228), Expect = 2e-17
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP+YSP+SP+YS +SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 808 YSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 867
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 868 SPS-YSP 873
Score = 92.0 bits (227), Expect = 3e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YS +
Sbjct: 773 YSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLT 832
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 833 SPS-YSP 838
Score = 92.0 bits (227), Expect = 3e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS TSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 801 YSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 860
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 861 SPS-YSP 866
Score = 91.7 bits (226), Expect = 4e-17
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP S YSP+ P YS S
Sbjct: 745 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYS-S 803
Query: 388 STSQYTP 368
++ Y+P
Sbjct: 804 TSPAYSP 810
Score = 91.3 bits (225), Expect = 5e-17
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+YSPSSP YSP+SP S TSP YSP+SP +SP S YS + P YSP+
Sbjct: 752 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPT 811
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 812 SPS-YSP 817
Score = 91.3 bits (225), Expect = 5e-17
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYS TSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P
Sbjct: 822 YSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYNPQ 881
Query: 388 STSQYTPKTNDNKDDP 341
S ++Y+P + P
Sbjct: 882 S-AKYSPSLAYSPSSP 896
Score = 88.6 bits (218), Expect = 3e-16
Identities = 43/67 (64%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSP+SP YSP+SP YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+
Sbjct: 731 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 790
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 791 SPA-YSP 796
Score = 87.0 bits (214), Expect = 9e-16
Identities = 44/68 (64%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSP 392
+SP+S P YSP+SP YSPSSP YSP+SP S TSP YSP+SP +SPS+ GYSP+ P YSP
Sbjct: 723 FSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 782
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 783 TSPS-YSP 789
Score = 76.6 bits (187), Expect = 1e-12
Identities = 41/70 (58%), Positives = 50/70 (71%), Gaps = 8/70 (11%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSP+SP YS P+SP+YSP+SP S TSP YS +SP +SP S YSP+
Sbjct: 759 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPT 818
Query: 409 QPGYSPSSTS 380
P YSP+S S
Sbjct: 819 SPAYSPTSPS 828
Score = 55.1 bits (131), Expect = 4e-06
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = -3
Query: 553 SPSY--SPT---SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSP 392
SPSY SP SPS Y ++ +SP YSPSSP +SPS+ GYSP+ PGYSP
Sbjct: 695 SPSYLLSPNLRLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSP 754
Query: 391 SSTSQYTPKTNDNKDDPG 338
+S + PG
Sbjct: 755 TSPGYSPTSPTYSPSSPG 772
[3][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SXC0_RICCO
Length = 1855
Score = 137 bits (344), Expect = 7e-31
Identities = 65/82 (79%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG PDYSPSSPQ+SPS GYSPS PGYSPSS
Sbjct: 1765 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVGPDYSPSSPQYSPSAGYSPSAPGYSPSS 1824
Query: 385 TSQYT-PKTNDNKDDPGTK*AR 323
TSQYT T D++ D G + R
Sbjct: 1825 TSQYTQTSTKDDRTDKGDRNGR 1846
Score = 99.4 bits (246), Expect = 2e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S GYSP+ P YSP+
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1721
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1722 SPS-YSP 1727
Score = 98.6 bits (244), Expect = 3e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ PGYSP+
Sbjct: 1655 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPT 1714
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1715 SPS-YSP 1720
Score = 96.7 bits (239), Expect = 1e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1679
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1680 SPS-YSP 1685
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1623
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1624 SPS-YSP 1629
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPT 1658
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1659 SPA-YSP 1664
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1634 YSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1693
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1694 SPS-YSP 1699
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1651
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1652 SPA-YSP 1657
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1641 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1701 SPA-YSP 1706
Score = 92.0 bits (227), Expect = 3e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP+SP YSP+SP YSP+SP YSP+SP S TSP YSP+SP +SPS+ GYSP+ P YSP+
Sbjct: 1543 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 1602
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1603 SPS-YSP 1608
Score = 91.7 bits (226), Expect = 4e-17
Identities = 43/66 (65%), Positives = 51/66 (77%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+P S ++SPS YSPS P SPS
Sbjct: 1697 YSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPS- 1755
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1756 -SPYSP 1760
Score = 91.3 bits (225), Expect = 5e-17
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+
Sbjct: 1550 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 1609
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1610 SPS-YSP 1615
Score = 90.9 bits (224), Expect = 6e-17
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1585 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644
Query: 388 S 386
S
Sbjct: 1645 S 1645
Score = 89.0 bits (219), Expect = 2e-16
Identities = 44/69 (63%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S Y+P YSPS
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 1742
Query: 388 STSQYTPKT 362
Y+P +
Sbjct: 1743 LA--YSPSS 1749
Score = 87.4 bits (215), Expect = 7e-16
Identities = 53/103 (51%), Positives = 59/103 (57%), Gaps = 27/103 (26%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY-------------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 428
YSPTSPSYSPTSPSY SPSSP SPSSPY S TSP+YSP+SP +SP S
Sbjct: 1718 YSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPY-SPTSPNYSPTSPSYSPTS 1776
Query: 427 TGYSPSQPGYSPS-------------STSQYTPKTNDNKDDPG 338
YSPS P YSPS S+ QY+P + PG
Sbjct: 1777 PSYSPSSPTYSPSSPYNSGVGPDYSPSSPQYSPSAGYSPSAPG 1819
Score = 86.7 bits (213), Expect = 1e-15
Identities = 45/68 (66%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
+SPT SP YSP+SP YSPSSP YSP+SP S TSP YSP+SP +SP S YSPS PGYSP
Sbjct: 1535 FSPTLSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 1594
Query: 391 SSTSQYTP 368
+S + Y+P
Sbjct: 1595 TSPA-YSP 1601
Score = 84.7 bits (208), Expect = 4e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPT 1665
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1666 SPSYSPTSPS-YSP 1678
Score = 83.2 bits (204), Expect = 1e-14
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1571 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1631 SPSYSPTSPS-YSP 1643
Score = 58.5 bits (140), Expect = 3e-07
Identities = 34/70 (48%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = -3
Query: 544 YSPT-SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 368
+SPT SP YSPSSP YSPSSP YSP+SP GYSP+ PGYSP+S
Sbjct: 1535 FSPTLSPGYSPSSPGYSPSSP-------GYSPTSP------GYSPTSPGYSPTSPGYSPT 1581
Query: 367 KTNDNKDDPG 338
+ PG
Sbjct: 1582 SPTYSPSSPG 1591
[4][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
binding / DNA-directed RNA polymerase n=1 Tax=Vitis
vinifera RepID=UPI0001985649
Length = 1848
Score = 136 bits (343), Expect = 1e-30
Identities = 63/74 (85%), Positives = 69/74 (93%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSPSYSPTSPSYSP+SPTYSP+SPYNSG SPDYSPSSPQ+SPS GYSPS PGYSPSS
Sbjct: 1772 YSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGYSPSS 1831
Query: 385 TSQYTPKTNDNKDD 344
TSQYTP+ + NKD+
Sbjct: 1832 TSQYTPQMS-NKDN 1844
Score = 99.4 bits (246), Expect = 2e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S GYSP+ P YSP+
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1728
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1729 SPS-YSP 1734
Score = 98.6 bits (244), Expect = 3e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ PGYSP+
Sbjct: 1662 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPT 1721
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1722 SPS-YSP 1727
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPT 1679
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1680 SPS-YSP 1685
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1623
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1624 SPS-YSP 1629
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1651
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1652 SPS-YSP 1657
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPT 1658
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1659 SPA-YSP 1664
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1641 YSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1701 SPS-YSP 1706
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1648 YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1707
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1708 SPA-YSP 1713
Score = 93.2 bits (230), Expect = 1e-17
Identities = 44/66 (66%), Positives = 52/66 (78%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+PSS ++SPS YSPS P SPS
Sbjct: 1704 YSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAYSPSSPRLSPS- 1762
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1763 -SPYSP 1767
Score = 92.0 bits (227), Expect = 3e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP+SP YSP+SP YSP+SP YSP+SP S TSP YSP+SP +SPS+ GYSP+ P YSP+
Sbjct: 1543 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 1602
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1603 SPS-YSP 1608
Score = 91.3 bits (225), Expect = 5e-17
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+
Sbjct: 1550 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 1609
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1610 SPS-YSP 1615
Score = 90.9 bits (224), Expect = 6e-17
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1585 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644
Query: 388 S 386
S
Sbjct: 1645 S 1645
Score = 90.5 bits (223), Expect = 8e-17
Identities = 45/69 (65%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S Y+PS YSPS
Sbjct: 1690 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPS 1749
Query: 388 STSQYTPKT 362
Y+P +
Sbjct: 1750 LA--YSPSS 1756
Score = 86.7 bits (213), Expect = 1e-15
Identities = 45/68 (66%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
+SPTS P YSP+SP YSPSSP YSP+SP S TSP YSP+SP +SP S YSPS PGYSP
Sbjct: 1535 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 1594
Query: 391 SSTSQYTP 368
+S + Y+P
Sbjct: 1595 TSPA-YSP 1601
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPT 1665
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1666 SPAYSPTSPS-YSP 1678
Score = 84.7 bits (208), Expect = 4e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1686
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1687 SPSYSPTSPS-YSP 1699
Score = 83.2 bits (204), Expect = 1e-14
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1571 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1631 SPSYSPTSPS-YSP 1643
Score = 58.9 bits (141), Expect = 3e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = -3
Query: 547 SYSPTS-PSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYT 371
++SPTS P YSPSSP YSPSSP YSP+SP GYSP+ PGYSP+S
Sbjct: 1534 AFSPTSSPGYSPSSPGYSPSSP-------GYSPTSP------GYSPTSPGYSPTSPGYSP 1580
Query: 370 PKTNDNKDDPG 338
+ PG
Sbjct: 1581 TSPTYSPSSPG 1591
[5][TOP]
>UniRef100_A7NVN8 Chromosome chr18 scaffold_1, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7NVN8_VITVI
Length = 89
Score = 134 bits (336), Expect = 6e-30
Identities = 62/73 (84%), Positives = 68/73 (93%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSST 383
SPTSPSYSPTSPSYSP+SPTYSP+SPYNSG SPDYSPSSPQ+SPS GYSPS PGYSPSST
Sbjct: 14 SPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGYSPSST 73
Query: 382 SQYTPKTNDNKDD 344
SQYTP+ + NKD+
Sbjct: 74 SQYTPQMS-NKDN 85
[6][TOP]
>UniRef100_Q56Z04 DNA-directed RNA polymerase II largest chain (Fragment) n=1
Tax=Arabidopsis thaliana RepID=Q56Z04_ARATH
Length = 99
Score = 115 bits (288), Expect = 2e-24
Identities = 54/78 (69%), Positives = 61/78 (78%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP+YSPTSPSYSP+SP+YSPSSP S +SP S +SP +SPS GYSP+ PGYSPSS
Sbjct: 12 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 71
Query: 385 TSQYTPKTNDNKDDPGTK 332
T QYTP D KD G K
Sbjct: 72 TGQYTPHEGDKKDKTGKK 89
[7][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
thaliana RepID=RPB1_ARATH
Length = 1840
Score = 115 bits (288), Expect = 2e-24
Identities = 54/78 (69%), Positives = 61/78 (78%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP+YSPTSPSYSP+SP+YSPSSP S +SP S +SP +SPS GYSP+ PGYSPSS
Sbjct: 1753 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 1812
Query: 385 TSQYTPKTNDNKDDPGTK 332
T QYTP D KD G K
Sbjct: 1813 TGQYTPHEGDKKDKTGKK 1830
Score = 98.6 bits (244), Expect = 3e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ PGYSP+
Sbjct: 1650 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPT 1709
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1710 SPS-YSP 1715
Score = 98.2 bits (243), Expect = 4e-19
Identities = 46/63 (73%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S GYSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1716
Query: 388 STS 380
S S
Sbjct: 1717 SPS 1719
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPT 1653
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1654 SPA-YSP 1659
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1559 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1618
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1619 SPS-YSP 1624
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1629 YSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1689 SPS-YSP 1694
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1587 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1646
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1647 SPA-YSP 1652
Score = 93.6 bits (231), Expect = 9e-18
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1696 SPA-YSP 1701
Score = 92.0 bits (227), Expect = 3e-17
Identities = 43/67 (64%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1580 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1640 SPA-YSP 1645
Score = 91.3 bits (225), Expect = 5e-17
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+
Sbjct: 1545 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 1604
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1605 SPS-YSP 1610
Score = 88.2 bits (217), Expect = 4e-16
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF---SPSTGYSPSQPGYS 395
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP + SPS Y P+ P Y+
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPS--YGPTSPSYN 1728
Query: 394 PSSTSQYTP 368
P S ++Y+P
Sbjct: 1729 PQS-AKYSP 1736
Score = 87.0 bits (214), Expect = 9e-16
Identities = 41/60 (68%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP + P S Y+P YSPS
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS 1737
Score = 85.9 bits (211), Expect = 2e-15
Identities = 43/68 (63%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSP 392
+SP+S P YSP+SP YSP+SP YSP+SP S TSP YSP+SP +SPS+ GYSP+ P YSP
Sbjct: 1537 FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 1596
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1597 TSPS-YSP 1603
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPT 1660
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1661 SPSYSPTSPS-YSP 1673
Score = 85.1 bits (209), Expect = 3e-15
Identities = 44/86 (51%), Positives = 54/86 (62%), Gaps = 20/86 (23%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF----------------- 437
YSPTSPSYSPTSP+YSP+SP YSP+SP S TSP Y P+SP +
Sbjct: 1685 YSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSN 1744
Query: 436 ---SPSTGYSPSQPGYSPSSTSQYTP 368
SP++ YSP+ P YSP+S S Y+P
Sbjct: 1745 ARLSPASPYSPTSPNYSPTSPS-YSP 1769
Score = 83.2 bits (204), Expect = 1e-14
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1566 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1626 SPSYSPTSPS-YSP 1638
[8][TOP]
>UniRef100_Q6ZJR1 DNA-directed RNA polymerase largest chain-like protein n=1
Tax=Oryza sativa Japonica Group RepID=Q6ZJR1_ORYSJ
Length = 138
Score = 103 bits (258), Expect = 7e-21
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNS--GTSPDYSPSSPQFSPSTGYSPSQPGYSP 392
YSPTSP+YSPTSPSYS SP+YSP+SPY + G SPDYSP+SP +SPS YSP+ PGYSP
Sbjct: 59 YSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSPSGSYSPTAPGYSP 118
Query: 391 SST-SQYTPKTND 356
SST Q++P+ D
Sbjct: 119 SSTGQQFSPQAAD 131
[9][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YGY9_SORBI
Length = 1857
Score = 103 bits (258), Expect = 7e-21
Identities = 50/76 (65%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNS--GTSPDYSPSSPQFSPSTGYSPSQPGYSP 392
YSPTSP+YSPTSPSYS SP+YSP+SP+N+ G SPDYSP+SP +SPS YSP+ PGYSP
Sbjct: 1783 YSPTSPTYSPTSPSYSQPSPSYSPTSPFNTSGGPSPDYSPTSPNYSPSGSYSPTAPGYSP 1842
Query: 391 SSTSQYTPKTNDNKDD 344
SST Q ND D+
Sbjct: 1843 SSTGQ----GNDKDDE 1854
Score = 97.1 bits (240), Expect = 8e-19
Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPS 410
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1728
Query: 409 QPGYSPSSTSQYTP 368
PGYSP+S S Y+P
Sbjct: 1729 SPGYSPTSPS-YSP 1741
Score = 96.7 bits (239), Expect = 1e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1686
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1687 SPS-YSP 1692
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+PS
Sbjct: 1697 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPS 1756
Query: 388 STSQYTP 368
S ++Y+P
Sbjct: 1757 S-AKYSP 1762
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SPSYSPTSPSY+P SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1571 YSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1631 SPS-YSP 1636
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPT 1665
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1666 SPA-YSP 1671
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1655 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1714
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1715 SPS-YSP 1720
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1662 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1721
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1722 SPA-YSP 1727
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1599 YSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1658
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1659 SPA-YSP 1664
Score = 93.6 bits (231), Expect = 9e-18
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1648 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1707
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1708 SPS-YSP 1713
Score = 92.8 bits (229), Expect = 2e-17
Identities = 42/61 (68%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1592 YSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651
Query: 388 S 386
S
Sbjct: 1652 S 1652
Score = 91.7 bits (226), Expect = 4e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SPSYSP SPSYSP+SP+Y+P SP S TSP+YSP+SP +SP S YSP+ P YSP+
Sbjct: 1564 YSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPT 1623
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1624 SPS-YSP 1629
Score = 90.1 bits (222), Expect = 1e-16
Identities = 48/90 (53%), Positives = 57/90 (63%), Gaps = 19/90 (21%)
Frame = -3
Query: 565 YSPTSPS---YSPTSPSYSPSSPTYSPSSPYNS----------------GTSPDYSPSSP 443
YSP+SP YS TSPSYSP+SPTYSP+SP S G SPDYSP+SP
Sbjct: 1766 YSPSSPRMTPYSQTSPSYSPTSPTYSPTSPSYSQPSPSYSPTSPFNTSGGPSPDYSPTSP 1825
Query: 442 QFSPSTGYSPSQPGYSPSSTSQYTPKTNDN 353
+SPS YSP+ PGYSPSST Q K +++
Sbjct: 1826 NYSPSGSYSPTAPGYSPSSTGQGNDKDDES 1855
Score = 89.7 bits (221), Expect = 1e-16
Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+PSS ++SPS YSPS P +P S
Sbjct: 1718 YSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSHAYSPSSPRMTPYS 1777
Query: 385 --TSQYTP 368
+ Y+P
Sbjct: 1778 QTSPSYSP 1785
Score = 88.2 bits (217), Expect = 4e-16
Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 8/76 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S GYSP+ P
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1742
Query: 403 --GYSPSSTSQYTPKT 362
YSP+S S Y P +
Sbjct: 1743 SPSYSPTSPS-YNPSS 1757
Score = 87.4 bits (215), Expect = 7e-16
Identities = 43/61 (70%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSPS 389
YSPTSPSYSPTSP+YSP+SP YSP+SP S TSP YSP+SP ++PS+ YSPS YSPS
Sbjct: 1711 YSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSH-AYSPS 1769
Query: 388 S 386
S
Sbjct: 1770 S 1770
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1693
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1694 SPSYSPTSPS-YSP 1706
Score = 84.7 bits (208), Expect = 4e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPT 1672
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1673 SPSYSPTSPS-YSP 1685
Score = 77.4 bits (189), Expect = 7e-13
Identities = 49/109 (44%), Positives = 61/109 (55%), Gaps = 33/109 (30%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSS-----------------PYN------SGTSPDYS 455
YSPTSPSYSPTSPSYSP+SP+Y+PSS PY+ S TSP YS
Sbjct: 1732 YSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSHAYSPSSPRMTPYSQTSPSYSPTSPTYS 1791
Query: 454 PSSPQFS-PSTGYSPS---------QPGYSPSSTSQYTPKTNDNKDDPG 338
P+SP +S PS YSP+ P YSP+S + Y+P + + PG
Sbjct: 1792 PTSPSYSQPSPSYSPTSPFNTSGGPSPDYSPTSPN-YSPSGSYSPTAPG 1839
Score = 68.6 bits (166), Expect = 3e-10
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSP------SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQP 404
YSP+S YSP+SP YSP SP+YSP+SP S TSP Y+P SP YSP+ P
Sbjct: 1544 YSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPT------YSPTSP 1597
Query: 403 GYSPSSTSQYTP 368
YSP+S + Y+P
Sbjct: 1598 NYSPTSPT-YSP 1608
Score = 67.4 bits (163), Expect = 7e-10
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 14/78 (17%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSS-------------PTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
P+ YSP+S YSPSS P+YSP+SP S TSP Y+P SP +SP S
Sbjct: 1539 PSPGGYSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPN 1598
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPTYSPTSPS-YSP 1615
[10][TOP]
>UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FZ51_ORYSJ
Length = 1526
Score = 103 bits (258), Expect = 7e-21
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNS--GTSPDYSPSSPQFSPSTGYSPSQPGYSP 392
YSPTSP+YSPTSPSYS SP+YSP+SPY + G SPDYSP+SP +SPS YSP+ PGYSP
Sbjct: 1447 YSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSPSGSYSPTAPGYSP 1506
Query: 391 SST-SQYTPKTND 356
SST Q++P+ D
Sbjct: 1507 SSTGQQFSPQAAD 1519
Score = 99.8 bits (247), Expect = 1e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ PGYSP+
Sbjct: 1340 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPT 1399
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1400 SPS-YSP 1405
Score = 96.7 bits (239), Expect = 1e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1291 YSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1350
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1351 SPS-YSP 1356
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+PS
Sbjct: 1361 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPS 1420
Query: 388 STSQYTP 368
S ++Y+P
Sbjct: 1421 S-AKYSP 1426
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1284 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPT 1343
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1344 SPS-YSP 1349
Score = 95.5 bits (236), Expect = 2e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SPSYSPTSPSY+P SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1242 YSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1301
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1302 SPS-YSP 1307
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1263 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1322
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1323 SPA-YSP 1328
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1319 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1378
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1379 SPS-YSP 1384
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1326 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1385
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1386 SPA-YSP 1391
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSP SPSYSP+SP+Y+P SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1235 YSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1294
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1295 SPS-YSP 1300
Score = 93.6 bits (231), Expect = 9e-18
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1312 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1371
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1372 SPS-YSP 1377
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/68 (63%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+PSS ++SPS YSPS P SP S
Sbjct: 1382 YSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYS 1441
Query: 385 --TSQYTP 368
+ Y+P
Sbjct: 1442 QTSPNYSP 1449
Score = 87.8 bits (216), Expect = 5e-16
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSPS 389
YSPTSPSYSPTSP+YSP+SP YSP+SP S TSP+YSP+SP ++PS+ YSPS YSPS
Sbjct: 1375 YSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSH-AYSPS 1433
Query: 388 S 386
S
Sbjct: 1434 S 1434
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1270 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPT 1329
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1330 SPAYSPTSPS-YSP 1342
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1298 YSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1357
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1358 SPSYSPTSPS-YSP 1370
Score = 84.7 bits (208), Expect = 4e-15
Identities = 47/76 (61%), Positives = 55/76 (72%), Gaps = 8/76 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1347 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1406
Query: 409 QPGYSPSSTSQYTPKT 362
P YSP+S S Y P +
Sbjct: 1407 SPNYSPTSPS-YNPSS 1421
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/67 (62%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP P YSPTSPSYSP+SP+YSP+SP + SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1229 YSP-GPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPT 1287
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1288 SPS-YSP 1293
Score = 69.7 bits (169), Expect = 1e-10
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSP P YSP+SP+YSP+SP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1222 YSPSSPVYSP-GPGYSPTSPSYSPASP-------SYSPTSPSYTPGSPTYSPTSPSYSPT 1273
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1274 SPS-YSP 1279
Score = 67.8 bits (164), Expect = 5e-10
Identities = 39/69 (56%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPT-SPSYSPTSPS-YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
+SP SP Y+P+S YSPSSP YSP Y S TSP YSP+SP +SP S Y+P P YS
Sbjct: 1206 FSPVPSPGYTPSSGGGYSPSSPVYSPGPGY-SPTSPSYSPASPSYSPTSPSYTPGSPTYS 1264
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1265 PTSPS-YSP 1272
[11][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FQS9_CANGA
Length = 1715
Score = 103 bits (257), Expect = 9e-21
Identities = 50/75 (66%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPG 1700
Query: 388 STSQYTPKTNDNKDD 344
S + Y+PK D K D
Sbjct: 1701 SPT-YSPKDEDEKKD 1714
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1609
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1610 SPS-YSP 1615
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1571 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1631 SPS-YSP 1636
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1652 SPS-YSP 1657
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1673 SPS-YSP 1678
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1543 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1602
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1603 SPS-YSP 1608
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1557 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1616
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1617 SPSYSPTSPS-YSP 1629
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1578 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1638 SPSYSPTSPS-YSP 1650
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1659 SPSYSPTSPS-YSP 1671
Score = 84.7 bits (208), Expect = 4e-15
Identities = 40/64 (62%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 380
+SP +SPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1539 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598
Query: 379 QYTP 368
Y+P
Sbjct: 1599 -YSP 1601
[12][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 102 bits (255), Expect = 2e-20
Identities = 51/76 (67%), Positives = 60/76 (78%), Gaps = 4/76 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP +SPS+ YSPS P YSPS
Sbjct: 1651 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPSYSPS 1710
Query: 388 S---TSQYTPKTNDNK 350
S T++Y + N+ K
Sbjct: 1711 SPTFTNKYNYQPNNKK 1726
Score = 101 bits (251), Expect = 4e-20
Identities = 53/83 (63%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ YSPS P YSPS
Sbjct: 1644 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPS 1703
Query: 388 STSQYTPK----TNDNKDDPGTK 332
S S Y+P TN P K
Sbjct: 1704 SPS-YSPSSPTFTNKYNYQPNNK 1725
Score = 99.4 bits (246), Expect = 2e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1574 YSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1633
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1634 SPS-YSP 1639
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1623 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1682
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1683 SPS-YSPSS 1690
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1602 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1661
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1662 SPS-YSP 1667
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1553 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPT 1612
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1613 SPS-YSP 1618
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1595 YSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1654
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1655 SPS-YSP 1660
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y P SP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1546 YFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPT 1605
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1606 SPS-YSP 1611
Score = 87.8 bits (216), Expect = 5e-16
Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 8/76 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1630 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1689
Query: 403 --GYSPSSTSQYTPKT 362
YSPSS S Y+P +
Sbjct: 1690 SPSYSPSSPS-YSPSS 1704
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1609 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1668
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1669 SPSYSPTSPS-YSP 1681
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1560 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPT 1619
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1620 SPSYSPTSPS-YSP 1632
Score = 75.5 bits (184), Expect = 3e-12
Identities = 35/58 (60%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+S Y P SP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1542 SSYQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1599
Score = 60.5 bits (145), Expect = 9e-08
Identities = 36/74 (48%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPT---SPSYSP-----TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPS 410
+SP+ SP Y+ +S Y P SPTYSP+SP S TSP YSP+SP YSP+
Sbjct: 1524 FSPSAMNSPGYNANKSYGSSYQYFPQSPTYSPTSPSYSPTSPSYSPTSPS------YSPT 1577
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1578 SPSYSPTSPS-YSP 1590
[13][TOP]
>UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium
gossypii RepID=RPB1_ASHGO
Length = 1745
Score = 101 bits (251), Expect = 4e-20
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 11/88 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 S------TSQYTPKTNDN----KDDPGT 335
S + Y+P N+N KD+ GT
Sbjct: 1717 SPQYSPRSPSYSPSFNNNDKEQKDENGT 1744
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1612 SPS-YSP 1617
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1633 SPS-YSP 1638
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1654 SPS-YSP 1659
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1545 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1605 SPS-YSP 1610
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1559 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1619 SPSYSPTSPS-YSP 1631
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1640 SPSYSPTSPS-YSP 1652
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1661 SPSYSPTSPS-YSP 1673
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 84.7 bits (208), Expect = 4e-15
Identities = 40/64 (62%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 380
+SP +SPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1541 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1600
Query: 379 QYTP 368
Y+P
Sbjct: 1601 -YSP 1603
[14][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GID7_PICST
Length = 1739
Score = 100 bits (250), Expect = 6e-20
Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPG 1721
Query: 388 ST--SQYTPKTNDNKDD 344
S S +PKT D K++
Sbjct: 1722 SPEYSPNSPKTEDKKNE 1738
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPT 1707
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1708 S-PQYSP 1713
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1609
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1610 SPS-YSP 1615
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1578 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1638 SPS-YSP 1643
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1659 SPS-YSP 1664
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1679
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1680 SPS-YSP 1685
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1571 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1631 SPS-YSP 1636
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1700
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1701 SPS-YSP 1706
Score = 91.7 bits (226), Expect = 4e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y TSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1543 YGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1602
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1603 SPS-YSP 1608
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1585 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1645 SPSYSPTSPS-YSP 1657
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1665
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1666 SPSYSPTSPS-YSP 1678
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1557 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1616
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1617 SPSYSPTSPS-YSP 1629
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1686
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1687 SPQYSPTS-PQYSP 1699
Score = 81.6 bits (200), Expect = 4e-14
Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP Y TSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1540 SPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPS- 1598
Query: 376 YTP 368
Y+P
Sbjct: 1599 YSP 1601
Score = 61.6 bits (148), Expect = 4e-08
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Frame = -3
Query: 559 PTSPSYSPTSP-SYSPSSPTYSPS-SPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
PTSPS TSP SY +SP++ S SP GTSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1517 PTSPS--ATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1574
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1575 SPA-YSP 1580
[15][TOP]
>UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1
Tax=Pichia guilliermondii RepID=RPB1_PICGU
Length = 1579
Score = 100 bits (250), Expect = 6e-20
Identities = 50/80 (62%), Positives = 60/80 (75%), Gaps = 7/80 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1497 YSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPAYSPTSPQYSPN 1556
Query: 388 S------TSQYTPKTNDNKD 347
S + Y+P ND+KD
Sbjct: 1557 SPQYSPRSPLYSPDQNDDKD 1576
Score = 98.2 bits (243), Expect = 4e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1476 YSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1535
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1536 S-PQYSP 1541
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1385 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1444
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1445 SPS-YSP 1450
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1406 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1465
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1466 SPS-YSP 1471
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1427 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1486
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1487 SPS-YSP 1492
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1448 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPT 1507
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1508 SPS-YSP 1513
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1469 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPT 1528
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1529 SPS-YSP 1534
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1378 YGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1437
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1438 SPS-YSP 1443
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1392 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1451
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1452 SPSYSPTSPS-YSP 1464
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1413 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1472
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1473 SPSYSPTSPS-YSP 1485
Score = 85.1 bits (209), Expect = 3e-15
Identities = 43/63 (68%), Positives = 49/63 (77%), Gaps = 4/63 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP---GY 398
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1434 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1493
Query: 397 SPS 389
SPS
Sbjct: 1494 SPS 1496
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP++ YSP+ P
Sbjct: 1455 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPT 1514
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1515 SPSYSPTSPS-YSP 1527
Score = 82.8 bits (203), Expect = 2e-14
Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y SP Y TSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1371 YGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1430
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1431 SPS-YSP 1436
Score = 79.7 bits (195), Expect = 1e-13
Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y TSP+Y SP Y +SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1364 YGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1423
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1424 SPS-YSP 1429
Score = 72.0 bits (175), Expect = 3e-11
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = -3
Query: 562 SPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
SPTSP +Y TSP+Y +SP Y +SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1357 SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1416
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1417 SPS-YSP 1422
[16][TOP]
>UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 2 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270E9
Length = 2014
Score = 100 bits (249), Expect = 8e-20
Identities = 50/67 (74%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSPSSPQ+SP S YSP P YSPS
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPS 1772
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1773 SPS-YSP 1778
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1682 SPS-YSP 1687
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ YSP+ P YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQ 1765
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1766 SPS-YSPSS 1773
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPT 1723
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1724 SPS-YSP 1729
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSP SPSYSPSSP+YSP+SP S TSP YSP+SP++SP S YSPS P YSPS
Sbjct: 1755 YSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPS 1814
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1815 SPN-YSP 1820
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSPSSP+YSPSSP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1790 YSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPT 1849
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1850 SPA-YSP 1855
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 95.1 bits (235), Expect = 3e-18
Identities = 44/61 (72%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 388 S 386
S
Sbjct: 1703 S 1703
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1601 YSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1661 SPS-YSP 1666
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/69 (66%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS P YSP+
Sbjct: 1699 YSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPT 1758
Query: 388 STSQYTPKT 362
S + Y+P++
Sbjct: 1759 SPA-YSPQS 1766
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/69 (66%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP+YSP SP+YSPSSP S TSP YSP+SP++SP S YSP+ P YSPS
Sbjct: 1748 YSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPS 1807
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1808 SPS-YSPSS 1815
Score = 94.0 bits (232), Expect = 7e-18
Identities = 47/67 (70%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSPSSP +SP S YSP+ P YSP+
Sbjct: 1734 YSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPT 1793
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1794 S-PKYSP 1799
Score = 93.6 bits (231), Expect = 9e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP+SPSYSPTSP YSP+SP YSP+SP S TSP YSPSSP +SPS+ YSP+ P YSP+
Sbjct: 1769 YSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPT 1828
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1829 SPT-YSP 1834
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1594 YSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1654 SPS-YSP 1659
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/94 (52%), Positives = 58/94 (61%), Gaps = 28/94 (29%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------------- 431
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP++SP
Sbjct: 1832 YSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPTSPKYSPTSPIYSPT 1891
Query: 430 -------STGYSPSQPGYSPSS------TSQYTP 368
STGYSP+ P YSPSS T QY+P
Sbjct: 1892 SPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSP 1925
Score = 91.7 bits (226), Expect = 4e-17
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1811 YSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPT 1870
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1871 S-PKYSP 1876
Score = 89.4 bits (220), Expect = 2e-16
Identities = 47/80 (58%), Positives = 60/80 (75%), Gaps = 8/80 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSG---TSPDYSPSSPQFSPST-GYSPS 410
YSPTSP YSPTSP YSP+SP YSP+SP ++G TSP+YSPSSP++SP+T YSP+
Sbjct: 1867 YSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPT 1926
Query: 409 QPGYSPSSTSQYTPKTNDNK 350
P YSP+S + Y+P T +K
Sbjct: 1927 SPKYSPASPT-YSPSTPTDK 1945
Score = 87.8 bits (216), Expect = 5e-16
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SP+SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1588 SPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTS 1647
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1648 PS-YSP 1652
Score = 87.4 bits (215), Expect = 7e-16
Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SP+++P SP+ SPSSP YSP+SP S TSP YSP+SP +SP S GYSP+ P YSP+
Sbjct: 1573 YSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPT 1632
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1633 SPS-YSP 1638
Score = 87.4 bits (215), Expect = 7e-16
Identities = 47/73 (64%), Positives = 54/73 (73%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP---GY 398
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPT 1744
Query: 397 SPS---STSQYTP 368
SPS S+ QY+P
Sbjct: 1745 SPSYSPSSPQYSP 1757
Score = 87.4 bits (215), Expect = 7e-16
Identities = 44/82 (53%), Positives = 49/82 (59%), Gaps = 16/82 (19%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST------------- 425
YSPTS YSPTSP YSPSSP YSP++P S TSP YSP+SP +SPST
Sbjct: 1895 YSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSP 1954
Query: 424 ---GYSPSQPGYSPSSTSQYTP 368
YSP P YSP T Y+P
Sbjct: 1955 LEPDYSPGTPTYSPDGTPTYSP 1976
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPS-YSP 1701
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP++ YSP+
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPT 1709
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1710 SPSYSPTSPS-YSP 1722
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/85 (54%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+YSP+S YSP+SP S +SP YSP++PQ+SP S YSP+ P YSPS
Sbjct: 1881 YSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPS 1940
Query: 388 STS-------QYTPKTNDNKDDPGT 335
+ + Y+P D PGT
Sbjct: 1941 TPTDKSVGSINYSPLEPDY--SPGT 1963
Score = 84.0 bits (206), Expect = 7e-15
Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSPSYSPTSP YS P+SP+YSPSSP S TSP YSP SP +SPS+ YSP+
Sbjct: 1720 YSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPT 1779
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +Y+P
Sbjct: 1780 SPKYSPTS-PKYSP 1792
Score = 81.6 bits (200), Expect = 4e-14
Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSP-------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSP +SP+YSP+SPTYSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1797 YSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPT 1856
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1857 SPVYSPTSPA-YSP 1869
Score = 80.9 bits (198), Expect = 6e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP YS P+SP+YSPSSP S +SP+YSP+SP +SP S YSP+
Sbjct: 1776 YSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPT 1835
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1836 SPAYSPTSPA-YSP 1848
Score = 78.2 bits (191), Expect = 4e-13
Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -3
Query: 550 PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 374
PSYSP SP+++P SP SPSSP S TSP YSP+SP +SP S YSP+ PGYSP+S S Y
Sbjct: 1571 PSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPS-Y 1629
Query: 373 TP 368
+P
Sbjct: 1630 SP 1631
Score = 78.2 bits (191), Expect = 4e-13
Identities = 42/68 (61%), Positives = 50/68 (73%), Gaps = 8/68 (11%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1818 YSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPT 1877
Query: 409 QPGYSPSS 386
P YSP+S
Sbjct: 1878 SPKYSPTS 1885
Score = 65.5 bits (158), Expect = 3e-09
Identities = 38/85 (44%), Positives = 45/85 (52%), Gaps = 23/85 (27%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP----------------YNSGT-------SPDYS 455
YSPT+P YSPTSP YSP+SPTYSPS+P Y+ GT +P YS
Sbjct: 1916 YSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSPGTPTYSPDGTPTYS 1975
Query: 454 PSSPQFSPSTGYSPSQPGYSPSSTS 380
P FS + + S YSPSS S
Sbjct: 1976 PDGRGFSGTAAKNISPMDYSPSSPS 2000
Score = 59.7 bits (143), Expect = 1e-07
Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPS----YSPT---SPSYSP--SSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YS 416
+SP++ S +SP SP++SP S P+YSP+SP + SP SPSSP +SP++ YS
Sbjct: 1543 FSPSAHSDASGFSPAGGFSPAWSPQDSIPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYS 1602
Query: 415 PSQPGYSPSSTSQYTP 368
P+ PGYSP+S S Y+P
Sbjct: 1603 PTSPGYSPTSPS-YSP 1617
[17][TOP]
>UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270BB
Length = 2041
Score = 100 bits (249), Expect = 8e-20
Identities = 50/67 (74%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSPSSPQ+SP S YSP P YSPS
Sbjct: 1740 YSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPS 1799
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1800 SPS-YSP 1805
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1709 SPS-YSP 1714
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ YSP+ P YSP
Sbjct: 1733 YSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQ 1792
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1793 SPS-YSPSS 1800
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPT 1764
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1765 SPS-YSP 1770
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPT 1750
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1751 SPS-YSP 1756
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSP SPSYSPSSP+YSP+SP S TSP YSP+SP++SP S YSPS P YSPS
Sbjct: 1782 YSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPS 1841
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1842 SPN-YSP 1847
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSPSSP+YSPSSP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1817 YSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPT 1876
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1877 SPA-YSP 1882
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1635 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1695 SPS-YSP 1700
Score = 95.1 bits (235), Expect = 3e-18
Identities = 44/61 (72%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729
Query: 388 S 386
S
Sbjct: 1730 S 1730
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1628 YSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1688 SPS-YSP 1693
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/69 (66%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS P YSP+
Sbjct: 1726 YSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPT 1785
Query: 388 STSQYTPKT 362
S + Y+P++
Sbjct: 1786 SPA-YSPQS 1793
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/69 (66%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP+YSP SP+YSPSSP S TSP YSP+SP++SP S YSP+ P YSPS
Sbjct: 1775 YSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPS 1834
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1835 SPS-YSPSS 1842
Score = 94.0 bits (232), Expect = 7e-18
Identities = 47/67 (70%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSPSSP +SP S YSP+ P YSP+
Sbjct: 1761 YSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPT 1820
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1821 S-PKYSP 1826
Score = 93.6 bits (231), Expect = 9e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP+SPSYSPTSP YSP+SP YSP+SP S TSP YSPSSP +SPS+ YSP+ P YSP+
Sbjct: 1796 YSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPT 1855
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1856 SPT-YSP 1861
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1621 YSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1681 SPS-YSP 1686
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/94 (52%), Positives = 58/94 (61%), Gaps = 28/94 (29%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------------- 431
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP++SP
Sbjct: 1859 YSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPTSPKYSPTSPIYSPT 1918
Query: 430 -------STGYSPSQPGYSPSS------TSQYTP 368
STGYSP+ P YSPSS T QY+P
Sbjct: 1919 SPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSP 1952
Score = 91.7 bits (226), Expect = 4e-17
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1838 YSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPT 1897
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1898 S-PKYSP 1903
Score = 89.4 bits (220), Expect = 2e-16
Identities = 47/80 (58%), Positives = 60/80 (75%), Gaps = 8/80 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSG---TSPDYSPSSPQFSPST-GYSPS 410
YSPTSP YSPTSP YSP+SP YSP+SP ++G TSP+YSPSSP++SP+T YSP+
Sbjct: 1894 YSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPT 1953
Query: 409 QPGYSPSSTSQYTPKTNDNK 350
P YSP+S + Y+P T +K
Sbjct: 1954 SPKYSPASPT-YSPSTPTDK 1972
Score = 87.8 bits (216), Expect = 5e-16
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SP+SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1615 SPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTS 1674
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1675 PS-YSP 1679
Score = 87.4 bits (215), Expect = 7e-16
Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SP+++P SP+ SPSSP YSP+SP S TSP YSP+SP +SP S GYSP+ P YSP+
Sbjct: 1600 YSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPT 1659
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1660 SPS-YSP 1665
Score = 87.4 bits (215), Expect = 7e-16
Identities = 47/73 (64%), Positives = 54/73 (73%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP---GY 398
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPT 1771
Query: 397 SPS---STSQYTP 368
SPS S+ QY+P
Sbjct: 1772 SPSYSPSSPQYSP 1784
Score = 87.4 bits (215), Expect = 7e-16
Identities = 44/82 (53%), Positives = 49/82 (59%), Gaps = 16/82 (19%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST------------- 425
YSPTS YSPTSP YSPSSP YSP++P S TSP YSP+SP +SPST
Sbjct: 1922 YSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSP 1981
Query: 424 ---GYSPSQPGYSPSSTSQYTP 368
YSP P YSP T Y+P
Sbjct: 1982 LEPDYSPGTPTYSPDGTPTYSP 2003
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1716 SPSYSPTSPS-YSP 1728
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP++ YSP+
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPT 1736
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1737 SPSYSPTSPS-YSP 1749
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/85 (54%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+YSP+S YSP+SP S +SP YSP++PQ+SP S YSP+ P YSPS
Sbjct: 1908 YSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPS 1967
Query: 388 STS-------QYTPKTNDNKDDPGT 335
+ + Y+P D PGT
Sbjct: 1968 TPTDKSVGSINYSPLEPDY--SPGT 1990
Score = 84.0 bits (206), Expect = 7e-15
Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSPSYSPTSP YS P+SP+YSPSSP S TSP YSP SP +SPS+ YSP+
Sbjct: 1747 YSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPT 1806
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +Y+P
Sbjct: 1807 SPKYSPTS-PKYSP 1819
Score = 81.6 bits (200), Expect = 4e-14
Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSP-------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSP +SP+YSP+SPTYSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1824 YSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPT 1883
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1884 SPVYSPTSPA-YSP 1896
Score = 80.9 bits (198), Expect = 6e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP YS P+SP+YSPSSP S +SP+YSP+SP +SP S YSP+
Sbjct: 1803 YSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPT 1862
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1863 SPAYSPTSPA-YSP 1875
Score = 79.7 bits (195), Expect = 1e-13
Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SPSYSP SP+++P SP SPSSP S TSP YSP+SP +SP S YSP+ PGYSP+S S
Sbjct: 1597 SPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPS- 1655
Query: 376 YTP 368
Y+P
Sbjct: 1656 YSP 1658
Score = 78.2 bits (191), Expect = 4e-13
Identities = 42/68 (61%), Positives = 50/68 (73%), Gaps = 8/68 (11%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1845 YSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPT 1904
Query: 409 QPGYSPSS 386
P YSP+S
Sbjct: 1905 SPKYSPTS 1912
Score = 72.8 bits (177), Expect = 2e-11
Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SPS + SPSYSP+SP ++P SP S +SP YSP+SP +SP S GYSP+ P YSP+S
Sbjct: 1590 SPSRNVMSPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPG- 1648
Query: 376 YTP 368
Y+P
Sbjct: 1649 YSP 1651
Score = 65.5 bits (158), Expect = 3e-09
Identities = 38/85 (44%), Positives = 45/85 (52%), Gaps = 23/85 (27%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP----------------YNSGT-------SPDYS 455
YSPT+P YSPTSP YSP+SPTYSPS+P Y+ GT +P YS
Sbjct: 1943 YSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSPGTPTYSPDGTPTYS 2002
Query: 454 PSSPQFSPSTGYSPSQPGYSPSSTS 380
P FS + + S YSPSS S
Sbjct: 2003 PDGRGFSGTAAKNISPMDYSPSSPS 2027
Score = 54.3 bits (129), Expect = 6e-06
Identities = 33/75 (44%), Positives = 41/75 (54%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSST 383
SP S Y P SPS + SP+YSP+SP + SP SPSSP GYSP+ P YSP+S
Sbjct: 1581 SPDSSPYIP-SPSRNVMSPSYSPNSPAFNPQSPAMSPSSP------GYSPTSPLYSPTSP 1633
Query: 382 SQYTPKTNDNKDDPG 338
+ + PG
Sbjct: 1634 GYSPTSPSYSPTSPG 1648
[18][TOP]
>UniRef100_UPI000051AA8E PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Apis mellifera
RepID=UPI000051AA8E
Length = 452
Score = 100 bits (249), Expect = 8e-20
Identities = 50/67 (74%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P+SP S TSP YSPSSPQ+SP S YSPS P YSP+
Sbjct: 265 YSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPT 324
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 325 SPS-YSP 330
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 216 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 275
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 276 SPS-YSPSS 283
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 167 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 226
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 227 SPS-YSP 232
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 188 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 247
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 248 SPS-YSP 253
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 209 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 268
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 269 SPS-YSP 274
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS P Y+P+
Sbjct: 230 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPA 289
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 290 SPS-YSP 295
Score = 97.4 bits (241), Expect = 6e-19
Identities = 46/69 (66%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ Y+P+ P YSP+
Sbjct: 237 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPT 296
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 297 SPS-YSPSS 304
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 160 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 219
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 220 SPS-YSP 225
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 153 YSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 212
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 213 SPS-YSP 218
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y PTSPS +PSSP YSP+SP S TSP+YSP+SP +SP S YSP+ P YSP+
Sbjct: 132 YSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 191
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 192 SPS-YSP 197
Score = 90.5 bits (223), Expect = 8e-17
Identities = 50/83 (60%), Positives = 57/83 (68%), Gaps = 15/83 (18%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS-------YSPSSPTYSPSSPYNSGTSPDYSPSSPQF--SPSTGYSP 413
YSPTSPSYSPTSPS Y+P+SPTYSP+SP S TSP YSPSSPQ S ST YSP
Sbjct: 321 YSPTSPSYSPTSPSFAGTSPQYTPASPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSP 380
Query: 412 SQPGYSPSS------TSQYTPKT 362
S P YSP+S + QY+P +
Sbjct: 381 SSPNYSPTSPTYSPTSPQYSPSS 403
Score = 89.0 bits (219), Expect = 2e-16
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSP+YSPTSP YSPSS YSP+SP + TSP YSP+SP +SP GYSP+ P YSP+
Sbjct: 385 YSPTSPTYSPTSPQYSPSSTKYSPTSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPA 444
Query: 388 STSQYT 371
S + T
Sbjct: 445 SPAYET 450
Score = 88.2 bits (217), Expect = 4e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP+YSPTSP+YSP+SP YSPSS S TSP Y+P+SP +SP S YSP PGYSP+
Sbjct: 378 YSPSSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPTYTPTSPSYSPTSPTYSPPVPGYSPT 437
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 438 SPT-YSP 443
Score = 86.7 bits (213), Expect = 1e-15
Identities = 46/93 (49%), Positives = 57/93 (61%), Gaps = 15/93 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------------- 431
Y+P SPSYSPTSPSYSPSSP YSP+SP S +SP YSP+SP +SP
Sbjct: 286 YTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPA 345
Query: 430 STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTK 332
S YSP+ P YSP+S S Y+P + + T+
Sbjct: 346 SPTYSPTSPTYSPTSPS-YSPSSPQHTASGSTR 377
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 174 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 233
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 234 SPSYSPTSPS-YSP 246
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 195 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 254
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 255 SPSYSPTSPS-YSP 267
Score = 84.7 bits (208), Expect = 4e-15
Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 8/76 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S +SP+Y+P+SP +SP S YSPS
Sbjct: 244 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPS 303
Query: 409 QPGYSPSSTSQYTPKT 362
P YSP+S S Y+P +
Sbjct: 304 SPQYSPASPS-YSPSS 318
Score = 83.2 bits (204), Expect = 1e-14
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS--------YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSP 413
YSPTSPSYSP+SP YSPSSP YSP+SP S TSP YSPSS ++SP S Y+P
Sbjct: 356 YSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPTYTP 415
Query: 412 SQPGYSPSSTSQYTP 368
+ P YSP+S + Y+P
Sbjct: 416 TSPSYSPTSPT-YSP 429
Score = 81.6 bits (200), Expect = 4e-14
Identities = 40/63 (63%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SPSYSPTSP+Y P+SP+ +PSSP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 129 SPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPS- 187
Query: 376 YTP 368
Y+P
Sbjct: 188 YSP 190
Score = 78.6 bits (192), Expect = 3e-13
Identities = 43/74 (58%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
Y PTSPS +P+SP+YSP+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 139 YLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 198
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 199 SPSYSPTSPS-YSP 211
Score = 60.8 bits (146), Expect = 7e-08
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP--------SSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSP 413
YSP S PS SP +SP+YSP+SP TSP +PSSP +SP S YSP
Sbjct: 103 YSPQPGSPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSP 162
Query: 412 SQPGYSPSSTSQYTP 368
+ P YSP+S S Y+P
Sbjct: 163 TSPNYSPTSPS-YSP 176
[19][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
RepID=UPI0000F24379
Length = 1739
Score = 100 bits (248), Expect = 1e-19
Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPLYSPTSPQYSPTSPQYSPG 1721
Query: 388 ST--SQYTPKTNDNKDD 344
S S +PKT D K++
Sbjct: 1722 SPEYSPNSPKTEDKKNE 1738
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1609
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1610 SPS-YSP 1615
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1578 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1638 SPS-YSP 1643
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1659 SPS-YSP 1664
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1679
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1680 SPS-YSP 1685
Score = 97.4 bits (241), Expect = 6e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPLYSPT 1707
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1708 S-PQYSP 1713
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1571 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1631 SPS-YSP 1636
Score = 91.7 bits (226), Expect = 4e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y TSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1543 YGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1602
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1603 SPS-YSP 1608
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1585 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1645 SPSYSPTSPS-YSP 1657
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1665
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1666 SPSYSPTSPS-YSP 1678
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1557 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1616
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1617 SPSYSPTSPS-YSP 1629
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1686
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1687 SPQYSPTS-PQYSP 1699
Score = 81.6 bits (200), Expect = 4e-14
Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP Y TSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1540 SPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPS- 1598
Query: 376 YTP 368
Y+P
Sbjct: 1599 YSP 1601
Score = 61.6 bits (148), Expect = 4e-08
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Frame = -3
Query: 559 PTSPSYSPTSP-SYSPSSPTYSPS-SPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
PTSPS TSP SY +SP++ S SP GTSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1517 PTSPS--ATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1574
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1575 SPA-YSP 1580
[20][TOP]
>UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7S8F9_NEMVE
Length = 1929
Score = 100 bits (248), Expect = 1e-19
Identities = 47/69 (68%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ YSPS P YSP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQ 1779
Query: 388 STSQYTPKT 362
S S +P +
Sbjct: 1780 SPSYASPSS 1788
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1758
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1759 SPS-YSPSS 1766
Score = 97.8 bits (242), Expect = 5e-19
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP +SPS+ YSP P Y+
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASP 1786
Query: 388 STSQYTP 368
S+ +Y+P
Sbjct: 1787 SSPKYSP 1793
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+YSP+SP+YSPSSP S TSP Y+P+SP +SP S YSPS P YSPS
Sbjct: 1798 YSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPS 1857
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1858 S-PRYTP 1863
Score = 95.5 bits (236), Expect = 2e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1629 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1689 SPS-YSP 1694
Score = 93.6 bits (231), Expect = 9e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSY+P SPSYSP+SP+YSPSSP S +SP Y+P+SPQ+SP S YSP+ P YSP
Sbjct: 1826 YSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSP- 1884
Query: 388 STSQYTP 368
+T YTP
Sbjct: 1885 TTPSYTP 1891
Score = 92.0 bits (227), Expect = 3e-17
Identities = 46/75 (61%), Positives = 55/75 (73%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------STGYSP 413
YSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSPSSP +SP S YSP
Sbjct: 1734 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSSPKYSP 1793
Query: 412 SQPGYSPSSTSQYTP 368
+ P YSP+S +Y+P
Sbjct: 1794 ASPSYSPTS-PKYSP 1807
Score = 92.0 bits (227), Expect = 3e-17
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SPSYSPTSP YSP+SP YSP+SP S +SP YSP+SP ++P S YSP+ P YSPS
Sbjct: 1791 YSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPS 1850
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1851 SPS-YSPSS 1858
Score = 91.3 bits (225), Expect = 5e-17
Identities = 49/82 (59%), Positives = 56/82 (68%), Gaps = 16/82 (19%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP--------YNSGTSPDYSPSSPQFSP------- 431
YSPTSPSYSPTSPSYSPSSP+YSPSSP Y S +SP YSP+SP +SP
Sbjct: 1748 YSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSSPKYSPASPSYSPTSPKYSP 1807
Query: 430 -STGYSPSQPGYSPSSTSQYTP 368
S YSP+ P YSPSS +Y+P
Sbjct: 1808 TSPNYSPASPSYSPSS-PKYSP 1828
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/69 (62%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSPSY+P+SP+YSP+SP S +SP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1819 YSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPA 1878
Query: 388 STSQYTPKT 362
S + Y+P T
Sbjct: 1879 SPN-YSPTT 1886
Score = 89.0 bits (219), Expect = 2e-16
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPS--YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
YSP+SPS YSP SPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YS
Sbjct: 1620 YSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1679
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1680 PTSPS-YSP 1687
Score = 88.2 bits (217), Expect = 4e-16
Identities = 48/76 (63%), Positives = 57/76 (75%), Gaps = 8/76 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1765
Query: 403 --GYSPSSTSQYTPKT 362
YSPSS S Y+P++
Sbjct: 1766 SPSYSPSSPS-YSPQS 1780
Score = 87.8 bits (216), Expect = 5e-16
Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SP+SP YSP SPSYSP+SP YSP+SP S SP YSPSSP++SP S Y+P+ P YSP+S
Sbjct: 1785 SPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPAS 1844
Query: 385 TSQYTPKT 362
S Y+P +
Sbjct: 1845 PS-YSPSS 1851
Score = 87.4 bits (215), Expect = 7e-16
Identities = 45/68 (66%), Positives = 52/68 (76%), Gaps = 3/68 (4%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
SP SPSYSPTSP YSPSSP+ YSP+SP S TSP YSP+SP +SP S YSP+ P YSP
Sbjct: 1607 SPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1667 TSPS-YSP 1673
Score = 87.4 bits (215), Expect = 7e-16
Identities = 41/67 (61%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSPS 389
YSP SPSYSP+SP YSP+SP+Y+P+SP S SP YSPSSP +SPS+ Y+P+ P YSP+
Sbjct: 1812 YSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPT 1871
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1872 S-PKYSP 1877
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPS-YSP 1736
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1745 SPSYSPTSPS-YSP 1757
Score = 81.6 bits (200), Expect = 4e-14
Identities = 42/69 (60%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN--SGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
+ P+SPS SP SPSYSP+SP YSPSSP + S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1599 FMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYS 1658
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1659 PTSPS-YSP 1666
Score = 80.9 bits (198), Expect = 6e-14
Identities = 38/60 (63%), Positives = 45/60 (75%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSP SPSYSP+SPSYSPSSP Y+P+SP S TSP YSP+SP +SP+T P Y+P S
Sbjct: 1840 YSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTT------PSYTPMS 1893
Score = 79.7 bits (195), Expect = 1e-13
Identities = 40/69 (57%), Positives = 53/69 (76%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD--YSPSSPQFSP-STGYSPSQPGYS 395
YSP+SP++ P+SPS SP+SP+YSP+SP S +SP YSP+SP +SP S YSP+ P YS
Sbjct: 1592 YSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYS 1651
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1652 PTSPS-YSP 1659
Score = 76.3 bits (186), Expect = 2e-12
Identities = 38/62 (61%), Positives = 47/62 (75%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQY 374
SP YSP+SP++ PSSP+ SP+SP S TSP YSPSSP S+GYSP+ P YSP+S S Y
Sbjct: 1589 SPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSP----SSGYSPASPSYSPTSPS-Y 1643
Query: 373 TP 368
+P
Sbjct: 1644 SP 1645
Score = 72.0 bits (175), Expect = 3e-11
Identities = 29/49 (59%), Positives = 41/49 (83%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 419
YSP+SPSYSP+SP Y+P+SP YSP+SP S SP+YSP++P ++P +G+
Sbjct: 1847 YSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTTPSYTPMSGH 1895
Score = 63.9 bits (154), Expect = 8e-09
Identities = 39/69 (56%), Positives = 46/69 (66%), Gaps = 4/69 (5%)
Frame = -3
Query: 562 SPTSPS-YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP--GYS 395
SP SP SP PS + +SP YSPSSP +SP SP+SP +SP S GYSPS P GYS
Sbjct: 1571 SPVSPGPTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYS 1630
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1631 PASPS-YSP 1638
Score = 62.8 bits (151), Expect = 2e-08
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 431
YSP+SP Y+PTSP YSP+SP YSP+SP S T+P Y+P S P
Sbjct: 1854 YSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTTPSYTPMSGHIVP 1898
Score = 55.5 bits (132), Expect = 3e-06
Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 12/74 (16%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY---NSGTSPDYSPSSPQFSPST--------GYSPSQ 407
SPS+ +P SP SP P+SPY + SP YSPSSP F PS+ YSP+
Sbjct: 1561 SPSWMSPTPG-SPVSP--GPTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTS 1617
Query: 406 PGYSPSS-TSQYTP 368
PGYSPSS +S Y+P
Sbjct: 1618 PGYSPSSPSSGYSP 1631
[21][TOP]
>UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5E245_LACTC
Length = 1740
Score = 100 bits (248), Expect = 1e-19
Identities = 51/79 (64%), Positives = 60/79 (75%), Gaps = 5/79 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPG 1715
Query: 388 STSQYTP----KTNDNKDD 344
S S Y+P K NDN ++
Sbjct: 1716 SPS-YSPGSPKKENDNDNN 1733
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1551 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1610
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1611 SPS-YSP 1616
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1572 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1631
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1632 SPS-YSP 1637
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1593 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1653 SPS-YSP 1658
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1674 SPS-YSP 1679
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1695 SPS-YSP 1700
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1544 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1603
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1604 SPS-YSP 1609
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1558 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1617
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1618 SPSYSPTSPS-YSP 1630
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1579 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1638
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1639 SPSYSPTSPS-YSP 1651
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1600 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1659
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1660 SPSYSPTSPS-YSP 1672
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1681 SPSYSPTSPS-YSP 1693
Score = 84.3 bits (207), Expect = 6e-15
Identities = 40/63 (63%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP +SPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1541 SPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS- 1599
Query: 376 YTP 368
Y+P
Sbjct: 1600 YSP 1602
Score = 79.7 bits (195), Expect = 1e-13
Identities = 43/79 (54%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS----PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 401
YSPTSPSYSPTSPSYS +YSP+SP S TSP YSP+SP +SP S YSP P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSP----SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGSPS 1718
Query: 400 YSPSSTSQYTPKTNDNKDD 344
YSP S + N+N ++
Sbjct: 1719 YSPGSPKKENDNDNNNNNN 1737
Score = 64.7 bits (156), Expect = 5e-09
Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Frame = -3
Query: 562 SPTSPSYSPT-SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+PTSP + SP +SP+SP YSP TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1530 APTSPGFGGVASPGFSPTSPAYSP-------TSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1582
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1583 SPS-YSP 1588
[22][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
RepID=Q30BD9_9EUKA
Length = 1852
Score = 99.8 bits (247), Expect = 1e-19
Identities = 50/67 (74%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP+ SP+SP S +SP YSPSSP +SPS+ YSPS P YSPS
Sbjct: 1721 YSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPS 1780
Query: 388 STSQYTP 368
S QYTP
Sbjct: 1781 S-PQYTP 1786
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1588 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPT 1647
Query: 388 STSQYTPKTNDNKDDPG 338
S S + + PG
Sbjct: 1648 SPSYSPTSPSYSPTSPG 1664
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1644 YSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1703
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1704 SPS-YSP 1709
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1630 YSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPT 1689
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1690 SPS-YSP 1695
Score = 95.1 bits (235), Expect = 3e-18
Identities = 47/76 (61%), Positives = 56/76 (73%), Gaps = 8/76 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPS 410
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1665 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPT 1724
Query: 409 QPGYSPSSTSQYTPKT 362
P YSP+S S Y+P +
Sbjct: 1725 SPSYSPTSPS-YSPSS 1739
Score = 95.1 bits (235), Expect = 3e-18
Identities = 49/69 (71%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPS SP+SP+YSP+SP S TSP YSPSSP SP S YSPS P YSPS
Sbjct: 1700 YSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPS 1759
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1760 SPS-YSPSS 1767
Score = 94.4 bits (233), Expect = 5e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1623 YSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPT 1682
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1683 SPS-YSP 1688
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YS +SPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ PGYSP+
Sbjct: 1574 YSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPT 1633
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1634 SPS-YSP 1639
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS +SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S GYSP+ P YSP+
Sbjct: 1581 YSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPT 1640
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1641 S-PRYSP 1646
Score = 90.1 bits (222), Expect = 1e-16
Identities = 47/71 (66%), Positives = 54/71 (76%), Gaps = 6/71 (8%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSP-----SQPG 401
SP SP+YSP+SPSYSPSSP+YSPSSP S +SP YSPSSPQ++P S YSP S P
Sbjct: 1743 SPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPASANYSPPSPLHSSPA 1802
Query: 400 YSPSSTSQYTP 368
YSP TSQY+P
Sbjct: 1803 YSP--TSQYSP 1811
Score = 89.4 bits (220), Expect = 2e-16
Identities = 45/81 (55%), Positives = 57/81 (70%), Gaps = 12/81 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP------------SSPQFSPSTG 422
YSP+SPSYSP+SPSYSPSSP+YSPSSP S +SP Y+P SSP +SP++
Sbjct: 1749 YSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPASANYSPPSPLHSSPAYSPTSQ 1808
Query: 421 YSPSQPGYSPSSTSQYTPKTN 359
YSP+ P Y SS + YTP++N
Sbjct: 1809 YSPTSPAYGASSPA-YTPQSN 1828
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP-------SSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSPSYSP+SP YSP +SP S TSP YSP+SP +SP S GYSP+
Sbjct: 1609 YSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPT 1668
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1669 SPSYSPTSPS-YSP 1681
Score = 85.5 bits (210), Expect = 3e-15
Identities = 43/67 (64%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SPSYS SP YSP+SP YS SSP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1560 YSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1619
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1620 SPS-YSP 1625
Score = 84.3 bits (207), Expect = 6e-15
Identities = 44/73 (60%), Positives = 53/73 (72%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP---GY 398
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1651 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1710
Query: 397 SPS---STSQYTP 368
SPS ++ Y+P
Sbjct: 1711 SPSCSPTSPSYSP 1723
Score = 84.3 bits (207), Expect = 6e-15
Identities = 43/71 (60%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPS- 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+ SPS SPS
Sbjct: 1686 YSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPT---SPSYSPSSPSC 1742
Query: 388 --STSQYTPKT 362
++ Y+P +
Sbjct: 1743 SPASPTYSPSS 1753
Score = 80.9 bits (198), Expect = 6e-14
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SPSYSP SPSYS +SP YSP+SP S +SP YSP+SP +SP S YSP+ P YSP+S +
Sbjct: 1557 SPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY 1616
Query: 376 YTPKTNDNKDDPG 338
+ + PG
Sbjct: 1617 SPTSPSYSPTSPG 1629
Score = 74.3 bits (181), Expect = 6e-12
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSP 392
YSP+SP YSP SP + +SP+YSP+SP S SP YSP+SP +S S+ YSP+ P YSP
Sbjct: 1538 YSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSP 1597
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1598 TSPS-YSP 1604
Score = 60.5 bits (145), Expect = 9e-08
Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = -3
Query: 547 SYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQY 374
S+SP YSPSSP YSP SP ++ SP YSP+SP +S S YSP+ PGYS SS S Y
Sbjct: 1531 SFSPHR-GYSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPS-Y 1588
Query: 373 TP 368
+P
Sbjct: 1589 SP 1590
[23][TOP]
>UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CL79_KLULA
Length = 1720
Score = 99.8 bits (247), Expect = 1e-19
Identities = 47/75 (62%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPG 1700
Query: 388 STSQYTPKTNDNKDD 344
S S PK ++ ++
Sbjct: 1701 SYSPAEPKQQESDEE 1715
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1693
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1694 S-PQYSP 1699
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1609
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1610 SPS-YSP 1615
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1571 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1631 SPS-YSP 1636
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1652 SPS-YSP 1657
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1673 SPS-YSP 1678
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1543 FSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1602
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1603 SPS-YSP 1608
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1557 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1616
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1617 SPSYSPTSPS-YSP 1629
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1578 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1638 SPSYSPTSPS-YSP 1650
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1659 SPSYSPTSPS-YSP 1671
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1679
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1680 SPSYSPTSPS-YSP 1692
Score = 84.3 bits (207), Expect = 6e-15
Identities = 40/64 (62%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 380
+SP +SPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1539 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598
Query: 379 QYTP 368
Y+P
Sbjct: 1599 -YSP 1601
[24][TOP]
>UniRef100_O96446 DNA-directed RNA polymerase n=1 Tax=Vairimorpha necatrix
RepID=O96446_9MICR
Length = 1605
Score = 99.8 bits (247), Expect = 1e-19
Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1523 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1582
Query: 388 STSQYTPKTNDNK 350
S S ND K
Sbjct: 1583 SPSYSPTYDNDEK 1595
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1509 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1568
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1569 SPS-YSP 1574
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1481 YSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1540
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1541 SPS-YSP 1546
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1474 YSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPT 1533
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1534 SPS-YSP 1539
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1502 YSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1561
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1562 SPS-YSP 1567
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1467 YSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPT 1526
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1527 SPS-YSP 1532
Score = 86.3 bits (212), Expect = 1e-15
Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P + YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1460 YAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPT 1519
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1520 SPS-YSP 1525
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1488 YSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1547
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1548 SPSYSPTSPS-YSP 1560
Score = 62.4 bits (150), Expect = 2e-08
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP+Y Y+P + YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S +
Sbjct: 1450 SPAYLVEGNRYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPT- 1508
Query: 376 YTP 368
Y+P
Sbjct: 1509 YSP 1511
[25][TOP]
>UniRef100_O94231 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kluyveromyces
lactis RepID=O94231_KLULA
Length = 414
Score = 99.8 bits (247), Expect = 1e-19
Identities = 47/75 (62%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP
Sbjct: 335 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPG 394
Query: 388 STSQYTPKTNDNKDD 344
S S PK ++ ++
Sbjct: 395 SYSPAEPKQQESDEE 409
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 328 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 387
Query: 388 STSQYTP 368
S QY+P
Sbjct: 388 S-PQYSP 393
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 244 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 303
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 304 SPS-YSP 309
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 265 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 324
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 325 SPS-YSP 330
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 286 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 345
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 346 SPS-YSP 351
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 307 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 366
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 367 SPS-YSP 372
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 237 FSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 296
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 297 SPS-YSP 302
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 251 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 310
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 311 SPSYSPTSPS-YSP 323
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 272 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 331
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 332 SPSYSPTSPS-YSP 344
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 293 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 352
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 353 SPSYSPTSPS-YSP 365
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 314 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 373
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 374 SPSYSPTSPS-YSP 386
Score = 84.3 bits (207), Expect = 6e-15
Identities = 40/64 (62%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 380
+SP +SPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 233 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 292
Query: 379 QYTP 368
Y+P
Sbjct: 293 -YSP 295
[26][TOP]
>UniRef100_Q99366 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99366_SOYBN
Length = 625
Score = 99.4 bits (246), Expect = 2e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S GYSP+ P YSP+
Sbjct: 475 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 534
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 535 SPS-YSP 540
Score = 98.6 bits (244), Expect = 3e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ PGYSP+
Sbjct: 468 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPT 527
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 528 SPS-YSP 533
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 419 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPT 478
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 479 SPS-YSP 484
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 440 YSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 499
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 500 SPS-YSP 505
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 384 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 443
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 444 SPS-YSP 449
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 447 YSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 506
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 507 SPS-YSP 512
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 412 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPT 471
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 472 SPA-YSP 477
Score = 92.0 bits (227), Expect = 3e-17
Identities = 43/67 (64%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 405 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 464
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 465 SPA-YSP 470
Score = 91.7 bits (226), Expect = 4e-17
Identities = 43/66 (65%), Positives = 51/66 (77%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+P S ++SPS YSPS P SPS
Sbjct: 510 YSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPS- 568
Query: 385 TSQYTP 368
S Y+P
Sbjct: 569 -SPYSP 573
Score = 89.7 bits (221), Expect = 1e-16
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSP+SP YSP+SP YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+
Sbjct: 370 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 429
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 430 SPS-YSP 435
Score = 89.0 bits (219), Expect = 2e-16
Identities = 44/69 (63%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S Y+P YSPS
Sbjct: 496 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 555
Query: 388 STSQYTPKT 362
Y+P +
Sbjct: 556 LA--YSPSS 562
Score = 88.6 bits (218), Expect = 3e-16
Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSP 392
+SPTS P YSP+SP YSPSSP YSP+SP S TSP YSP+SP +SPS+ GYSP+ P YSP
Sbjct: 362 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 421
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 422 TSPS-YSP 428
Score = 85.9 bits (211), Expect = 2e-15
Identities = 48/75 (64%), Positives = 51/75 (68%), Gaps = 14/75 (18%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY-------------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 428
YSPTSPSYSPTSPSY SPSSP SPSSPY S TSP+YSP+SP +SP S
Sbjct: 531 YSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPY-SPTSPNYSPTSPSYSPTS 589
Query: 427 TGYSPSQPGYSPSST 383
YSPS P YSPS T
Sbjct: 590 PSYSPSSPTYSPSRT 604
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 426 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPT 485
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 486 SPSYSPTSPS-YSP 498
Score = 82.8 bits (203), Expect = 2e-14
Identities = 47/80 (58%), Positives = 55/80 (68%), Gaps = 14/80 (17%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY-------------SPSSPYNSGTSPDYSPSSPQFSP-S 428
YSPTSPSYSPTSPSYSP+SP+Y SPSSP S +SP YSP+SP +SP S
Sbjct: 524 YSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSP-YSPTSPNYSPTS 582
Query: 427 TGYSPSQPGYSPSSTSQYTP 368
YSP+ P YSPSS + Y+P
Sbjct: 583 PSYSPTSPSYSPSSPT-YSP 601
Score = 82.0 bits (201), Expect = 3e-14
Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 391 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 450
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 451 SPSYSPTSPA-YSP 463
Score = 55.8 bits (133), Expect = 2e-06
Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSG------TSPDYSPSSPQFSPST-GYSPSQPGYS 395
SPSY SP+ S T + SPY G +SP YSPSSP +SPS+ GYSP+ PGYS
Sbjct: 334 SPSYL-LSPNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 392
Query: 394 PSSTSQYTPKTNDNKDDPG 338
P+S + PG
Sbjct: 393 PTSPGYSPTSPTYSPSSPG 411
[27][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NVN7_VITVI
Length = 1010
Score = 99.4 bits (246), Expect = 2e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S GYSP+ P YSP+
Sbjct: 906 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 965
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 966 SPS-YSP 971
Score = 98.6 bits (244), Expect = 3e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ PGYSP+
Sbjct: 899 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPT 958
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 959 SPS-YSP 964
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 857 YSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPT 916
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 917 SPS-YSP 922
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 801 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 860
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 861 SPS-YSP 866
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 829 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 888
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 889 SPS-YSP 894
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 836 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPT 895
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 896 SPA-YSP 901
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 878 YSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 937
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 938 SPS-YSP 943
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 885 YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 944
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 945 SPA-YSP 950
Score = 93.2 bits (230), Expect = 1e-17
Identities = 44/66 (66%), Positives = 52/66 (78%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+PSS ++SPS YSPS P SPS
Sbjct: 941 YSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAYSPSSPRLSPS- 999
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1000 -SPYSP 1004
Score = 92.0 bits (227), Expect = 3e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP+SP YSP+SP YSP+SP YSP+SP S TSP YSP+SP +SPS+ GYSP+ P YSP+
Sbjct: 780 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 839
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 840 SPS-YSP 845
Score = 91.3 bits (225), Expect = 5e-17
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+
Sbjct: 787 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 846
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 847 SPS-YSP 852
Score = 90.9 bits (224), Expect = 6e-17
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 822 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 881
Query: 388 S 386
S
Sbjct: 882 S 882
Score = 90.5 bits (223), Expect = 8e-17
Identities = 45/69 (65%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S Y+PS YSPS
Sbjct: 927 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPS 986
Query: 388 STSQYTPKT 362
Y+P +
Sbjct: 987 LA--YSPSS 993
Score = 86.7 bits (213), Expect = 1e-15
Identities = 45/68 (66%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
+SPTS P YSP+SP YSPSSP YSP+SP S TSP YSP+SP +SP S YSPS PGYSP
Sbjct: 772 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 831
Query: 391 SSTSQYTP 368
+S + Y+P
Sbjct: 832 TSPA-YSP 838
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 843 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPT 902
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 903 SPAYSPTSPS-YSP 915
Score = 84.7 bits (208), Expect = 4e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 864 YSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 923
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 924 SPSYSPTSPS-YSP 936
Score = 83.2 bits (204), Expect = 1e-14
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 808 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 867
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 868 SPSYSPTSPS-YSP 880
Score = 67.4 bits (163), Expect = 7e-10
Identities = 36/56 (64%), Positives = 39/56 (69%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGY 398
YSPTSPSYSPTSPSY+PSS YSPS Y S +SP SPSSP YSP+ P Y
Sbjct: 962 YSPTSPSYSPTSPSYNPSSAKYSPSLAY-SPSSPRLSPSSP-------YSPTSPNY 1009
Score = 58.9 bits (141), Expect = 3e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = -3
Query: 547 SYSPTS-PSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYT 371
++SPTS P YSPSSP YSPSSP YSP+SP GYSP+ PGYSP+S
Sbjct: 771 AFSPTSSPGYSPSSPGYSPSSP-------GYSPTSP------GYSPTSPGYSPTSPGYSP 817
Query: 370 PKTNDNKDDPG 338
+ PG
Sbjct: 818 TSPTYSPSSPG 828
[28][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA
Length = 1943
Score = 99.4 bits (246), Expect = 2e-19
Identities = 50/69 (72%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP YSPSSP S TSP YSP+SP +SPS+ YSPS P YSPS
Sbjct: 1788 YSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPS 1847
Query: 388 STSQYTPKT 362
S QYTP +
Sbjct: 1848 S-PQYTPSS 1855
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSPSSP++SP S YSP+ P YSPS
Sbjct: 1774 YSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPTYSPTSPAYSPS 1833
Query: 388 STSQYTPKT 362
S QY+P +
Sbjct: 1834 S-PQYSPSS 1841
Score = 96.7 bits (239), Expect = 1e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1690 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPT 1749
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1750 SPS-YSP 1755
Score = 96.7 bits (239), Expect = 1e-18
Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPS 410
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1697 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPA 1756
Query: 409 QPGYSPSSTSQYTP 368
PGYSPSS +Y+P
Sbjct: 1757 SPGYSPSS-PRYSP 1769
Score = 95.5 bits (236), Expect = 2e-18
Identities = 48/67 (71%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSPSSP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1739 YSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPT 1798
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1799 SPS-YSP 1804
Score = 95.5 bits (236), Expect = 2e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP S GYSPS P YSP+
Sbjct: 1760 YSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPT 1819
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1820 SPT-YSP 1825
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSPSSP++SP S YSP+ P YSP+
Sbjct: 1725 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPT 1784
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1785 SPA-YSP 1790
Score = 92.4 bits (228), Expect = 2e-17
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1732 YSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPT 1791
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1792 SPT-YSP 1797
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/68 (64%), Positives = 52/68 (76%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP+YSPTSP+YSPSSP YSPSSP S +SP Y+PSSP S YSP+ P YSPSS
Sbjct: 1816 YSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSS 1875
Query: 385 TSQYTPKT 362
+Y+P +
Sbjct: 1876 -PRYSPSS 1882
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y SP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S GYSP+ P YSP+
Sbjct: 1683 YGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPT 1742
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1743 SPS-YSP 1748
Score = 88.2 bits (217), Expect = 4e-16
Identities = 46/75 (61%), Positives = 55/75 (73%), Gaps = 7/75 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GTSPDYSPSSPQFSPST-GYSPSQ 407
YSPTSP+YSP+SP YSPSSP YSPSSP + SP YSP+SPQ+SPS+ YSPS
Sbjct: 1823 YSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSS 1882
Query: 406 PGYSPSSTSQYTPKT 362
P YSP+S QY+P +
Sbjct: 1883 PQYSPTS-PQYSPSS 1896
Score = 88.2 bits (217), Expect = 4e-16
Identities = 50/79 (63%), Positives = 55/79 (69%), Gaps = 13/79 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGT-----SPDYSPSSPQFSPST- 425
YSPTSP YSP+SP YSPS SP YSPSSP +GT SP YSPSSPQ+SPS+
Sbjct: 1864 YSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSPQYSPSSPQYSPSSP 1923
Query: 424 GYSPSQPGYSPSSTSQYTP 368
YSPS P YSPSS QY+P
Sbjct: 1924 QYSPSSPQYSPSS-PQYSP 1941
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/71 (66%), Positives = 53/71 (74%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 401
YSPTSPSYSPTSPSYSP+SP YSP SP TSP YSP+SP +SP S GYSPS P
Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPGYSPTSPSYSP----TSPSYSPTSPSYSPASPGYSPSSPR 1766
Query: 400 YSPSSTSQYTP 368
YSP+S + Y+P
Sbjct: 1767 YSPTSPA-YSP 1776
Score = 84.3 bits (207), Expect = 6e-15
Identities = 47/77 (61%), Positives = 52/77 (67%), Gaps = 13/77 (16%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP------------SSPQFSPST-GYSP 413
SP+YSPTSP YSPSSP YSPSSP S TSP YSP SSPQ+SPS+ YSP
Sbjct: 1861 SPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSPQYSPSSPQYSP 1920
Query: 412 SQPGYSPSSTSQYTPKT 362
S P YSPSS QY+P +
Sbjct: 1921 SSPQYSPSS-PQYSPSS 1936
Score = 84.0 bits (206), Expect = 7e-15
Identities = 45/80 (56%), Positives = 55/80 (68%), Gaps = 12/80 (15%)
Frame = -3
Query: 565 YSPTSPSYSPT------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS------TG 422
YSP+SP Y+P+ SP+YSP+SP YSPSSP S +SP YSP+SPQ+SPS T
Sbjct: 1844 YSPSSPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTS 1903
Query: 421 YSPSQPGYSPSSTSQYTPKT 362
YS S P YSPSS QY+P +
Sbjct: 1904 YSRSSPQYSPSS-PQYSPSS 1922
Score = 83.2 bits (204), Expect = 1e-14
Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y +SP+Y SP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ PGYSP+
Sbjct: 1676 YGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPT 1735
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1736 SPS-YSP 1741
Score = 63.5 bits (153), Expect = 1e-08
Identities = 35/75 (46%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = -3
Query: 556 TSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSST 383
+SP YSPTSP+ Y SSP Y SP S TSP YSP+SP YSP+ P YSP+S
Sbjct: 1663 SSPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSPS------YSPTSPSYSPTSP 1716
Query: 382 SQYTPKTNDNKDDPG 338
S + + PG
Sbjct: 1717 SYSPTSPSYSPTSPG 1731
[29][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E6J4_LODEL
Length = 1745
Score = 99.4 bits (246), Expect = 2e-19
Identities = 49/74 (66%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP S YSP P YSP
Sbjct: 1673 YSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPRSPNYSPK 1732
Query: 388 STSQYTPKTNDNKD 347
S +Y PK+ KD
Sbjct: 1733 S-PEYKPKSPSKKD 1745
Score = 98.6 bits (244), Expect = 3e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1645 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPT 1704
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1705 SPS-YSP 1710
Score = 98.6 bits (244), Expect = 3e-19
Identities = 47/69 (68%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1659 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPT 1718
Query: 388 STSQYTPKT 362
S QY+P++
Sbjct: 1719 S-PQYSPRS 1726
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1624 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1683
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1684 S-PQYSP 1689
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1540 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1599
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1600 SPS-YSP 1605
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1561 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1620
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1621 SPS-YSP 1626
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1582 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1641
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1642 SPS-YSP 1647
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1603 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1662
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1663 SPS-YSP 1668
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1547 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1606
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1607 SPSYSPTSPS-YSP 1619
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1568 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1627
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1628 SPSYSPTSPS-YSP 1640
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1589 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1648
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1649 SPSYSPTSPS-YSP 1661
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1610 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1669
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1670 SPSYSPTSPS-YSP 1682
Score = 84.7 bits (208), Expect = 4e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1631 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1690
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1691 SPQYSPTSPS-YSP 1703
Score = 79.3 bits (194), Expect = 2e-13
Identities = 41/69 (59%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSP--SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
Y TSP Y TSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YS
Sbjct: 1524 YGGTSPGYGGTSPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1583
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1584 PTSPS-YSP 1591
Score = 61.6 bits (148), Expect = 4e-08
Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSST 383
T+P Y TSP Y +SP Y SP+SP S TSP YSP+SP YSP+ P YSP+S
Sbjct: 1520 TTPGYGGTSPGYGGTSPGYGYSPTSPSYSPTSPSYSPTSPS------YSPTSPSYSPTSP 1573
Query: 382 SQYTP 368
S Y+P
Sbjct: 1574 S-YSP 1577
Score = 55.8 bits (133), Expect = 2e-06
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP--DYSPSSPQFSP-STGYSPSQPGYSPS 389
PTSP TSP ++P Y +SP GTSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1507 PTSPGN--TSPFSYGTTPGYGGTSPGYGGTSPGYGYSPTSPSYSPTSPSYSPTSPSYSPT 1564
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1565 SPS-YSP 1570
[30][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
elegans RepID=RPB1_CAEEL
Length = 1852
Score = 99.4 bits (246), Expect = 2e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ YSPS P YSPS
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPS 1671
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1672 S-PRYSP 1677
Score = 98.6 bits (244), Expect = 3e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP +SPS+ YSPS P YSP+
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPT 1678
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1679 SPT-YSP 1684
Score = 95.5 bits (236), Expect = 2e-18
Identities = 47/68 (69%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SP SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS P YSPSS
Sbjct: 1606 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSS 1665
Query: 385 TSQYTPKT 362
S Y+P +
Sbjct: 1666 PS-YSPSS 1672
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/63 (73%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSP+SPSYSPSSP+YSPSSP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1647 YSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPT 1706
Query: 388 STS 380
S S
Sbjct: 1707 SPS 1709
Score = 94.7 bits (234), Expect = 4e-18
Identities = 44/66 (66%), Positives = 52/66 (78%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSP+SP YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP + GYSPS P YSPSS
Sbjct: 1668 YSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSS 1727
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1728 PT-YSP 1732
Score = 94.4 bits (233), Expect = 5e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP+YSPSSP S +SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1640 YSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPT 1699
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1700 SPT-YSP 1705
Score = 92.0 bits (227), Expect = 3e-17
Identities = 47/73 (64%), Positives = 57/73 (78%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD------YSPSSPQFSPST-GYSPSQ 407
YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSPSSP++SPS+ YSP+
Sbjct: 1675 YSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTS 1734
Query: 406 PGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1735 PSYSPTS-PQYSP 1746
Score = 91.3 bits (225), Expect = 5e-17
Identities = 49/73 (67%), Positives = 54/73 (73%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 407
YSPTSP+YSPTSPS YSPSSP YSPSSP S TSP YSP+SPQ+SP S YSPS
Sbjct: 1696 YSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSS 1755
Query: 406 PGYSPSSTSQYTP 368
P Y+PSS + Y P
Sbjct: 1756 PTYTPSSPT-YNP 1767
Score = 90.1 bits (222), Expect = 1e-16
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 11/88 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP------SSPQFSP-STGYSPSQ 407
YSPTSPSYSPTSP YSP+SP YSPSSP + +SP Y+P SSPQ+SP S YSP+
Sbjct: 1730 YSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTS 1789
Query: 406 PGYSPSSTSQYTPK----TNDNKDDPGT 335
P Y+PSS QY+P T + PGT
Sbjct: 1790 PSYTPSS-PQYSPTSPTYTPSPSEQPGT 1816
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/78 (60%), Positives = 57/78 (73%), Gaps = 12/78 (15%)
Frame = -3
Query: 565 YSPTSPSY------SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQ 407
YSPTSPSY SP+SP YSPSSPTYSP+SP S TSP YSP+SPQ+SPS+ Y+PS
Sbjct: 1703 YSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSS 1762
Query: 406 PGYSPS-----STSQYTP 368
P Y+P+ S+ QY+P
Sbjct: 1763 PTYNPTSPRGFSSPQYSP 1780
Score = 89.0 bits (219), Expect = 2e-16
Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 7/75 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-------STGYSPSQ 407
YSP+SP+YSPTSPSYSP+SP YSP+SP S +SP Y+PSSP ++P S YSP+
Sbjct: 1723 YSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTS 1782
Query: 406 PGYSPSSTSQYTPKT 362
P YSP+S S YTP +
Sbjct: 1783 PTYSPTSPS-YTPSS 1796
Score = 88.2 bits (217), Expect = 4e-16
Identities = 46/75 (61%), Positives = 56/75 (74%), Gaps = 7/75 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT------YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 407
YSPTSP+YSPTSP+YSP+SP+ YSPSSP S +SP YSP+SP +SP S YSP+
Sbjct: 1689 YSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTS 1748
Query: 406 PGYSPSSTSQYTPKT 362
P YSPSS + YTP +
Sbjct: 1749 PQYSPSSPT-YTPSS 1762
Score = 87.8 bits (216), Expect = 5e-16
Identities = 42/69 (60%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSY+P+SP YSP+SPTY+PS GTS YSP+SP +SPS+ YSP+ P YSPS
Sbjct: 1785 YSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPTYSPASPSYSPS 1844
Query: 388 STSQYTPKT 362
S + Y P +
Sbjct: 1845 SPT-YDPNS 1852
Score = 87.4 bits (215), Expect = 7e-16
Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
YSPTSPSYSPTSP+ SP SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YS
Sbjct: 1589 YSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1648
Query: 394 PSSTSQYTPKT 362
P+S S Y+P +
Sbjct: 1649 PTSPS-YSPSS 1658
Score = 84.7 bits (208), Expect = 4e-15
Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSPSSP S +SP YSPSSP++SP S YSP+
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPT 1685
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1686 SPTYSPTSPT-YSP 1698
Score = 81.3 bits (199), Expect = 5e-14
Identities = 41/69 (59%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY--NSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
YSP+SP +S TSP YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YS
Sbjct: 1575 YSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYS 1634
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1635 PTSPS-YSP 1642
Score = 80.9 bits (198), Expect = 6e-14
Identities = 43/69 (62%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
+S TSP YSPTSPSYSP+SP SP SP S TSP YSP+SP +SP S YSP+ P YS
Sbjct: 1582 FSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1641
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1642 PTSPS-YSP 1649
Score = 78.2 bits (191), Expect = 4e-13
Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 14/80 (17%)
Frame = -3
Query: 565 YSPTSPSYSPTSP------SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG------ 422
Y+P+SP+Y+PTSP YSP+SPTYSP+SP + +SP YSP+SP ++PS
Sbjct: 1758 YTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTS 1817
Query: 421 --YSPSQPGYSPSSTSQYTP 368
YSP+ P YSPSS + Y+P
Sbjct: 1818 AQYSPTSPTYSPSSPT-YSP 1836
Score = 66.2 bits (160), Expect = 2e-09
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSP-----SYSPTSPSYSPSSP-TYSPSSPYNSGTSPDYSPSSPQFSPST---GYSP 413
+SP SP + SP +PSY SP YSPSSP S TSP YSP+SP +SP++ G SP
Sbjct: 1548 WSPASPGDPLGALSPRTPSYGGMSPGVYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSP 1607
Query: 412 SQPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1608 VSPSYSPTSPS-YSP 1621
[31][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5670C
Length = 2007
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSPS
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1742
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1743 S-PRYTP 1748
Score = 98.6 bits (244), Expect = 3e-19
Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P+SP S TSP YSPSSPQ+SP S +SPS P YSP+
Sbjct: 1725 YSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPASPSFSPSSPKYSPT 1784
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1785 SPS-YSP 1790
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1679
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1680 SPS-YSP 1685
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1701 SPS-YSP 1706
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1721
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1722 SPS-YSP 1727
Score = 97.1 bits (240), Expect = 8e-19
Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ YSP+
Sbjct: 1697 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPT 1756
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS QY+P
Sbjct: 1757 SPSYSPSS-PQYSP 1769
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1613 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1673 SPS-YSP 1678
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1606 YSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1665
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1666 SPS-YSP 1671
Score = 92.8 bits (229), Expect = 2e-17
Identities = 47/68 (69%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--STGYSPSQPGYSP 392
YSPTSPSYSPTSPS++ SP YSP+SP S TSP+YSPSSPQ +P S+ YSPS P YSP
Sbjct: 1781 YSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAASSRYSPSSPNYSP 1840
Query: 391 SSTSQYTP 368
SS S Y+P
Sbjct: 1841 SSPS-YSP 1847
Score = 92.0 bits (227), Expect = 3e-17
Identities = 40/69 (57%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SPS+SP+SP YSP+SP+YSP+SP +G SP YSP+SP +SP S YSPS P ++P+
Sbjct: 1767 YSPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPA 1826
Query: 388 STSQYTPKT 362
++S+Y+P +
Sbjct: 1827 ASSRYSPSS 1835
Score = 88.2 bits (217), Expect = 4e-16
Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+P SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1600 TPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1659
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1660 PS-YSP 1664
Score = 88.2 bits (217), Expect = 4e-16
Identities = 46/81 (56%), Positives = 53/81 (65%), Gaps = 15/81 (18%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------------- 431
Y+P SPSYSPTSPSYSPSSP YSP+SP S +SP YSP+SP +SP
Sbjct: 1746 YTPASPSYSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPT 1805
Query: 430 STGYSPSQPGYSPSSTSQYTP 368
S YSP+ P YSPSS Q+TP
Sbjct: 1806 SPSYSPTSPNYSPSS-PQHTP 1825
Score = 86.7 bits (213), Expect = 1e-15
Identities = 47/76 (61%), Positives = 56/76 (73%), Gaps = 8/76 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1728
Query: 403 --GYSPSSTSQYTPKT 362
YSP+S S Y+P +
Sbjct: 1729 SPSYSPTSPS-YSPSS 1743
Score = 86.3 bits (212), Expect = 1e-15
Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPS+ PTSPS +P SP YSP+SP S TSP+YSP+SP +SP S YSP+ P YSP+
Sbjct: 1585 YSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1644
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1645 SPS-YSP 1650
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1686
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1687 SPSYSPTSPS-YSP 1699
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1707
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1708 SPSYSPTSPS-YSP 1720
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP+YSP+SPSYSP+SP YSP S S TSP Y+P+SP +SP S YS P YSPS
Sbjct: 1831 YSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPS 1890
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1891 SPS-YSP 1896
Score = 80.5 bits (197), Expect = 8e-14
Identities = 43/76 (56%), Positives = 49/76 (64%), Gaps = 16/76 (21%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP---------------TYSPSSPYNSGTSPDYSPSSPQFSP 431
YSPTSPSYSPTSP+YSPSSP YSPSSP S TSP YSP S ++SP
Sbjct: 1802 YSPTSPSYSPTSPNYSPSSPQHTPAASSRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSP 1861
Query: 430 -STGYSPSQPGYSPSS 386
S Y+P+ P YSP+S
Sbjct: 1862 TSPTYTPTSPSYSPAS 1877
Score = 77.8 bits (190), Expect = 5e-13
Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SPSYSP+SPS+ P+SP+ +P SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1582 SPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPS- 1640
Query: 376 YTP 368
Y+P
Sbjct: 1641 YSP 1643
Score = 75.1 bits (183), Expect = 3e-12
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYS-PSQPGYSPS 389
YSP S YSPTSP+Y+P+SP+YSP+SP S P YSPSSP +SP++ + P P YS S
Sbjct: 1852 YSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTSPITLPPSPYYSRS 1911
Query: 388 STSQYTPKTND 356
S S YT + D
Sbjct: 1912 S-STYTFSSRD 1921
Score = 71.6 bits (174), Expect = 4e-11
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSP-------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 407
+P SP+ SP SPSYSPSSP++ P+SP + SP YSP+SP +SP S YSP+
Sbjct: 1565 TPQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTS 1624
Query: 406 PGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1625 PSYSPTSPS-YSP 1636
Score = 60.8 bits (146), Expect = 7e-08
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP--SQPGYSP 392
YSP+SPSYSPTSP P SP YS SS + +S DY+ SSP +SP+ + P YSP
Sbjct: 1887 YSPSSPSYSPTSPITLPPSPYYSRSSSTYTFSSRDYTYSSPPYSPTIPQDEMFTSPVYSP 1946
Query: 391 SSTSQYTPKTNDNKDDPGT 335
+ + N N+ + T
Sbjct: 1947 TIPKYFRSDINRNRTESPT 1965
Score = 60.1 bits (144), Expect = 1e-07
Identities = 35/73 (47%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
S SP Y SP+ P SP SP G SP YSPSSP F P S GYSP+
Sbjct: 1553 SGMSPGYGAWSPT--PQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVSPGYSPTS 1610
Query: 406 PGYSPSSTSQYTP 368
PGYSP+S + Y+P
Sbjct: 1611 PGYSPTSPN-YSP 1622
[32][TOP]
>UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5ACI7_CANAL
Length = 1728
Score = 99.0 bits (245), Expect = 2e-19
Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1648 YSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPT 1707
Query: 388 STSQYTPKTNDNKDDPGTK 332
S QY+P + + +P K
Sbjct: 1708 S-PQYSPGSPGYEPEPPKK 1725
Score = 98.2 bits (243), Expect = 4e-19
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1679
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1680 SPS-YSP 1685
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPT 1672
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1673 S-PQYSP 1678
Score = 95.5 bits (236), Expect = 2e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP+YSPTSPSY+P+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1571 YAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPT 1630
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1631 SPS-YSP 1636
Score = 95.5 bits (236), Expect = 2e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1651
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1652 SPS-YSP 1657
Score = 92.8 bits (229), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSY+P+SP YSP+SP + TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1543 YSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPT 1602
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1603 SPS-YSP 1608
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSY+PTSP+YSP+SP+Y+P+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1564 YSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPT 1623
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1624 SPS-YSP 1629
Score = 87.0 bits (214), Expect = 9e-16
Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSP+YS P+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+
Sbjct: 1627 YSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPT 1686
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1687 SPQYSPTS-PQYSP 1699
Score = 84.3 bits (207), Expect = 6e-15
Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSY+PTSP+YS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1578 YSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1638 SPAYSPTSPS-YSP 1650
Score = 83.2 bits (204), Expect = 1e-14
Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSP YS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1599 YSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1658
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1659 SPQYSPTSPS-YSP 1671
Score = 80.5 bits (197), Expect = 8e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSY+PTSP+YS P+SP YSP+SP + TSP YSP+SP +SP S YSP+
Sbjct: 1550 YSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPT 1609
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1610 SPQYSPTSPS-YSP 1622
Score = 79.0 bits (193), Expect = 2e-13
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Frame = -3
Query: 556 TSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
TSP Y SPTSPSYSP+SP+Y+P+SP S TSP Y+P+SP +SP S Y+P+ P YSP+S
Sbjct: 1537 TSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTS 1596
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1597 PA-YSP 1601
Score = 70.5 bits (171), Expect = 8e-11
Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
S TSP Y+ YSP+SP+YSP+SP + TSP YSP+SP ++P S YSP+ P Y+P+S
Sbjct: 1530 SITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTS 1589
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1590 PA-YSP 1594
[33][TOP]
>UniRef100_C8Z6G2 Rpo21p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z6G2_YEAST
Length = 1733
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/74 (64%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S GYSP P YSP
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPK 1720
Query: 388 STSQYTPKTNDNKD 347
Q K N+N++
Sbjct: 1721 QDEQ---KHNENEN 1731
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1615
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1616 SPS-YSP 1621
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1637 SPS-YSP 1642
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1679 SPS-YSP 1684
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1692
Query: 388 STSQYTPKTNDNKDDPG 338
S + + + PG
Sbjct: 1693 SPNYSPTSPSYSPTSPG 1709
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1609 SPS-YSP 1614
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1658 SPA-YSP 1663
Score = 93.6 bits (231), Expect = 9e-18
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1602 SPS-YSP 1607
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1622
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1623 SPSYSPTSPS-YSP 1635
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1584 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1643
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1644 SPSYSPTSPS-YSP 1656
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1664
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1665 SPSYSPTSPS-YSP 1677
Score = 84.7 bits (208), Expect = 4e-15
Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+ +SP +SPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1595 SPS-YSP 1600
Score = 82.4 bits (202), Expect = 2e-14
Identities = 39/66 (59%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+PTSP + +SP +SP+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1589 PS-YSP 1593
[34][TOP]
>UniRef100_C7GKZ2 Rpo21p n=2 Tax=Saccharomyces cerevisiae RepID=C7GKZ2_YEAS2
Length = 1733
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/74 (64%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S GYSP P YSP
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPK 1720
Query: 388 STSQYTPKTNDNKD 347
Q K N+N++
Sbjct: 1721 QDEQ---KHNENEN 1731
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1615
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1616 SPS-YSP 1621
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1637 SPS-YSP 1642
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1679 SPS-YSP 1684
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1692
Query: 388 STSQYTPKTNDNKDDPG 338
S + + + PG
Sbjct: 1693 SPNYSPTSPSYSPTSPG 1709
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1609 SPS-YSP 1614
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1658 SPA-YSP 1663
Score = 93.6 bits (231), Expect = 9e-18
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1602 SPS-YSP 1607
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1622
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1623 SPSYSPTSPS-YSP 1635
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1584 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1643
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1644 SPSYSPTSPS-YSP 1656
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1664
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1665 SPSYSPTSPS-YSP 1677
Score = 84.7 bits (208), Expect = 4e-15
Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+ +SP +SPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1595 SPS-YSP 1600
Score = 82.4 bits (202), Expect = 2e-14
Identities = 39/66 (59%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+PTSP + +SP +SP+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1589 PS-YSP 1593
[35][TOP]
>UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YN85_CANAL
Length = 1742
Score = 99.0 bits (245), Expect = 2e-19
Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1662 YSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPT 1721
Query: 388 STSQYTPKTNDNKDDPGTK 332
S QY+P + + +P K
Sbjct: 1722 S-PQYSPGSPGYEPEPPKK 1739
Score = 98.2 bits (243), Expect = 4e-19
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1693
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1694 SPS-YSP 1699
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPT 1686
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1687 S-PQYSP 1692
Score = 95.5 bits (236), Expect = 2e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP+YSPTSPSY+P+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1585 YAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPT 1644
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1645 SPS-YSP 1650
Score = 95.5 bits (236), Expect = 2e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1606 YSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1665
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1666 SPS-YSP 1671
Score = 92.8 bits (229), Expect = 2e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSY+PTSP+YSP+SP+Y+P+SP S TSP Y+P+SP +SP S YSP+ P YSP+
Sbjct: 1564 YSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPT 1623
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1624 S-PQYSP 1629
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSY+PTSP+YSP+SP+Y+P+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1578 YSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPT 1637
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1638 SPS-YSP 1643
Score = 90.5 bits (223), Expect = 8e-17
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSY+P+SP YSP+SP + TSP YSP+SP ++P S YSP+ P Y+P+
Sbjct: 1543 YSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPT 1602
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1603 SPA-YSP 1608
Score = 87.0 bits (214), Expect = 9e-16
Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSP+YS P+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+
Sbjct: 1641 YSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPT 1700
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1701 SPQYSPTS-PQYSP 1713
Score = 84.3 bits (207), Expect = 6e-15
Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSY+PTSP+YS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1592 YSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPT 1651
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1652 SPAYSPTSPS-YSP 1664
Score = 83.2 bits (204), Expect = 1e-14
Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSP YS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1613 YSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1672
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1673 SPQYSPTSPS-YSP 1685
Score = 80.5 bits (197), Expect = 8e-14
Identities = 43/74 (58%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSY+PTSP+YS P+SP YSP+SP + TSP YSP+SP ++P S YSP+
Sbjct: 1550 YSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPT 1609
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1610 SPAYSPTSPS-YSP 1622
Score = 79.7 bits (195), Expect = 1e-13
Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Frame = -3
Query: 556 TSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
TSP Y SPTSPSYSP+SP+Y+P+SP S TSP Y+P+SP +SP S Y+P+ P YSP+S
Sbjct: 1537 TSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTS 1596
Query: 385 TSQYTP 368
S Y P
Sbjct: 1597 PS-YAP 1601
Score = 70.5 bits (171), Expect = 8e-11
Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
S TSP Y+ YSP+SP+YSP+SP + TSP YSP+SP ++P S YSP+ P Y+P+S
Sbjct: 1530 SITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTS 1589
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1590 PA-YSP 1594
[36][TOP]
>UniRef100_C4Y5N3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y5N3_CLAL4
Length = 281
Score = 99.0 bits (245), Expect = 2e-19
Identities = 50/73 (68%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP P YSP
Sbjct: 209 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPGSPSYSPR 268
Query: 388 STSQYTPKTNDNK 350
S S Y K D K
Sbjct: 269 SPS-YGDKKEDEK 280
Score = 98.6 bits (244), Expect = 3e-19
Identities = 50/78 (64%), Positives = 60/78 (76%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP
Sbjct: 202 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPG 261
Query: 388 STSQYTPKT---NDNKDD 344
S S Y+P++ D K+D
Sbjct: 262 SPS-YSPRSPSYGDKKED 278
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 188 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 247
Query: 388 STSQYTP 368
S QY+P
Sbjct: 248 S-PQYSP 253
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 83 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 142
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 143 SPS-YSP 148
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 104 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 163
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 164 SPS-YSP 169
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 125 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 184
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 185 SPS-YSP 190
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 146 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 205
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 206 SPS-YSP 211
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 167 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 226
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 227 SPS-YSP 232
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 76 YGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 135
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 136 SPS-YSP 141
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 90 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 149
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 150 SPSYSPTSPS-YSP 162
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 111 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 170
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 171 SPSYSPTSPS-YSP 183
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 132 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 191
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 192 SPSYSPTSPS-YSP 204
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 153 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 212
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 213 SPSYSPTSPS-YSP 225
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 174 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 233
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 234 SPSYSPTSPS-YSP 246
Score = 82.8 bits (203), Expect = 2e-14
Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 380
TSP Y TSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 72 TSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 131
Query: 379 QYTP 368
Y+P
Sbjct: 132 -YSP 134
[37][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WN64_CANDC
Length = 1735
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1693
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1694 SPS-YSP 1699
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1609
Query: 388 STSQYTPKTNDNKDDPG 338
S S + + PG
Sbjct: 1610 SPSYSPTSPSYSPTSPG 1626
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1648 YSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1707
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1708 S-PQYSP 1713
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1543 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1602
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1603 SPS-YSP 1608
Score = 97.1 bits (240), Expect = 8e-19
Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPS 410
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1564 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1623
Query: 409 QPGYSPSSTSQYTP 368
PGYSP+S S Y+P
Sbjct: 1624 SPGYSPTSPS-YSP 1636
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPT 1651
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1652 SPS-YSP 1657
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1620 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1679
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1680 SPS-YSP 1685
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/69 (68%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP
Sbjct: 1662 YSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPRYSPG 1721
Query: 388 STSQYTPKT 362
S Y PK+
Sbjct: 1722 SPG-YEPKS 1729
Score = 95.5 bits (236), Expect = 2e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1613 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPT 1672
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1673 S-PQYSP 1678
Score = 92.4 bits (228), Expect = 2e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1655 YSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPT 1714
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1715 S-PRYSP 1720
Score = 88.6 bits (218), Expect = 3e-16
Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S GYSP+ P
Sbjct: 1578 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPT 1637
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1638 SPSYSPTSPS-YSP 1650
Score = 87.8 bits (216), Expect = 5e-16
Identities = 47/69 (68%), Positives = 53/69 (76%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP---QFSPSTGYSPSQPGYS 395
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP SPS YSP+ P YS
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPS--YSPTSPQYS 1663
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1664 PTSPS-YSP 1671
Score = 84.0 bits (206), Expect = 7e-15
Identities = 41/67 (61%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+ YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1536 YASPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1595
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1596 SPS-YSP 1601
Score = 75.5 bits (184), Expect = 3e-12
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 380
TSP Y+ YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1532 TSPGYASPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1591
Query: 379 QYTP 368
Y+P
Sbjct: 1592 -YSP 1594
Score = 67.4 bits (163), Expect = 7e-10
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 440
YSPTSPSYSPTSP YSP+SP YSP+SP S SP Y P SP+
Sbjct: 1690 YSPTSPSYSPTSPQYSPTSPQYSPTSPRYSPGSPGYEPKSPK 1731
Score = 67.0 bits (162), Expect = 9e-10
Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 5/59 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS----PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSPSYSPTSP YS +YSP+SP S TSP YSP+SP++SP S GY P P
Sbjct: 1676 YSPTSPSYSPTSPQYSPTSP----SYSPTSPQYSPTSPQYSPTSPRYSPGSPGYEPKSP 1730
[38][TOP]
>UniRef100_B3LH31 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a
RepID=B3LH31_YEAS1
Length = 1733
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/74 (64%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S GYSP P YSP
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPK 1720
Query: 388 STSQYTPKTNDNKD 347
Q K N+N++
Sbjct: 1721 QDEQ---KHNENEN 1731
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1615
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1616 SPS-YSP 1621
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1637 SPS-YSP 1642
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1679 SPS-YSP 1684
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1692
Query: 388 STSQYTPKTNDNKDDPG 338
S + + + PG
Sbjct: 1693 SPNYSPTSPSYSPTSPG 1709
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1609 SPS-YSP 1614
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1658 SPA-YSP 1663
Score = 93.6 bits (231), Expect = 9e-18
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1602 SPS-YSP 1607
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1622
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1623 SPSYSPTSPS-YSP 1635
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1584 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1643
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1644 SPSYSPTSPS-YSP 1656
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1664
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1665 SPSYSPTSPS-YSP 1677
Score = 84.7 bits (208), Expect = 4e-15
Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+ +SP +SPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1595 SPS-YSP 1600
Score = 82.0 bits (201), Expect = 3e-14
Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSST 383
PTSP + +SP +SP+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1589
Query: 382 SQYTP 368
S Y+P
Sbjct: 1590 S-YSP 1593
[39][TOP]
>UniRef100_P04050 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Saccharomyces
cerevisiae RepID=RPB1_YEAST
Length = 1733
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/74 (64%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S GYSP P YSP
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPK 1720
Query: 388 STSQYTPKTNDNKD 347
Q K N+N++
Sbjct: 1721 QDEQ---KHNENEN 1731
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1615
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1616 SPS-YSP 1621
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1637 SPS-YSP 1642
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1679 SPS-YSP 1684
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1692
Query: 388 STSQYTPKTNDNKDDPG 338
S + + + PG
Sbjct: 1693 SPNYSPTSPSYSPTSPG 1709
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1609 SPS-YSP 1614
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1658 SPA-YSP 1663
Score = 93.6 bits (231), Expect = 9e-18
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1602 SPS-YSP 1607
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1622
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1623 SPSYSPTSPS-YSP 1635
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1584 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1643
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1644 SPSYSPTSPS-YSP 1656
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1664
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1665 SPSYSPTSPS-YSP 1677
Score = 84.7 bits (208), Expect = 4e-15
Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+ +SP +SPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1595 SPS-YSP 1600
Score = 82.4 bits (202), Expect = 2e-14
Identities = 39/66 (59%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+PTSP + +SP +SP+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1589 PS-YSP 1593
[40][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48673
Length = 1880
Score = 98.6 bits (244), Expect = 3e-19
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP++SP S YSP+ P YSP
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQ 1741
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1742 SPS-YSP 1747
Score = 98.2 bits (243), Expect = 4e-19
Identities = 47/69 (68%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ YSP+ P YSP+
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPT 1734
Query: 388 STSQYTPKT 362
S S Y+P++
Sbjct: 1735 SPS-YSPQS 1742
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1654 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1713
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1714 SPS-YSPSS 1721
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1651 SPS-YSP 1656
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1671
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1672 SPS-YSP 1677
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1692
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1693 SPS-YSP 1698
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1570 YSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1630 SPS-YSP 1635
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP++SPSSPTYSP+SP S TSP YSPSSP++SP S YSP+ P YSP+
Sbjct: 1766 YSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPA 1825
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1826 SPT-YSP 1831
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/69 (66%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP S YSP P YSP
Sbjct: 1689 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPG 1748
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1749 SPS-YSPSS 1756
Score = 94.7 bits (234), Expect = 4e-18
Identities = 47/67 (70%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSP SPSYSP SP+YSPSSP S TSP YSP+SP +SP S +SPS P YSP+
Sbjct: 1731 YSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPA 1790
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1791 SPS-YSP 1796
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP SP+YSP SP S +SP YSP+SP +SP S YSP+ P +SPS
Sbjct: 1724 YSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPS 1783
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1784 SPT-YSP 1789
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS+ YSP+ P YSP+
Sbjct: 1759 YSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPT 1818
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1819 S-PKYSP 1824
Score = 92.4 bits (228), Expect = 2e-17
Identities = 47/69 (68%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SPSYSPTSP YSPSSP YSP+SP S TSP YSP+SP +SP S YSPS P YSP+
Sbjct: 1787 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1846
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1847 SPKGSTYSP 1855
Score = 92.4 bits (228), Expect = 2e-17
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSP+SP YSPTSP+YSP+SP YSP+SP S TSP YSPSSP +SP+ + YSP+ P Y
Sbjct: 1801 YSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSY 1860
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S S Y+P + DD
Sbjct: 1861 SPTSPS-YSPTSPGMGDD 1877
Score = 90.5 bits (223), Expect = 8e-17
Identities = 42/61 (68%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP S YSP+ P YSP+
Sbjct: 1717 YSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPT 1776
Query: 388 S 386
S
Sbjct: 1777 S 1777
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP S YSPS P YSP+
Sbjct: 1752 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPT 1811
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1812 SPT-YSP 1817
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/74 (64%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSPS
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1720
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1721 SPKYSPTSPS-YSP 1733
Score = 86.7 bits (213), Expect = 1e-15
Identities = 44/80 (55%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPG---Y 398
YSPTSP YSP+SP YSP+SPTYSP+SP S SP YSP+SP++SPS+ YSP+ P Y
Sbjct: 1794 YSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTY 1853
Query: 397 SPSSTSQYTPKTNDNKDDPG 338
SP+S S + + PG
Sbjct: 1854 SPTSPSYSPTSPSYSPTSPG 1873
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1658 SPSYSPTSPS-YSP 1670
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1679 SPSYSPTSPS-YSP 1691
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1700 SPSYSPTSPS-YSP 1712
Score = 85.9 bits (211), Expect = 2e-15
Identities = 42/63 (66%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1567 SPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS- 1625
Query: 376 YTP 368
Y+P
Sbjct: 1626 YSP 1628
Score = 84.0 bits (206), Expect = 7e-15
Identities = 46/83 (55%), Positives = 54/83 (65%), Gaps = 8/83 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP SP +SPS+ YSP+
Sbjct: 1703 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1762
Query: 409 QPGYSPSSTSQYTPKTNDNKDDP 341
P YSP+S S N + P
Sbjct: 1763 SPSYSPTSPSYSPTSPNFSPSSP 1785
Score = 83.2 bits (204), Expect = 1e-14
Identities = 44/70 (62%), Positives = 52/70 (74%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQP----GY 398
YSP SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+ SPS Y
Sbjct: 1584 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPSYSPTSPSY 1640
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1641 SPTSPS-YSP 1649
Score = 80.1 bits (196), Expect = 1e-13
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP SPSYSP SPSYS P+SP+YSP+SP S TSP++SPSSP +SP S YSP+
Sbjct: 1738 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPT 1797
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS +Y+P
Sbjct: 1798 SPKYSPSS-PKYSP 1810
Score = 79.7 bits (195), Expect = 1e-13
Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP++SP+SP+YS P+SP YSPSSP S TSP YSP+SP++SP S YSP+
Sbjct: 1773 YSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPT 1832
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS + Y+P
Sbjct: 1833 SPKYSPSSPT-YSP 1845
Score = 73.6 bits (179), Expect = 1e-11
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SP S SP YSP+SP+YSP+SP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1556 WSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPT 1615
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1616 SPS-YSP 1621
Score = 68.2 bits (165), Expect = 4e-10
Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
+SP SP++SP S SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP
Sbjct: 1548 FSPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSP 1607
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1608 TSPS-YSP 1614
Score = 60.5 bits (145), Expect = 9e-08
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPS---SPYNSGT-SPDYSPSSPQFSP-STGYSPSQPGY 398
+P P +SP + + SP YSP+ P + G+ SP YSP+SP +SP S GYSP+ P Y
Sbjct: 1532 TPGGPGFSPANSESTGFSPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPASPSY 1591
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1592 SPTSPS-YSP 1600
[41][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48672
Length = 1913
Score = 98.6 bits (244), Expect = 3e-19
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP++SP S YSP+ P YSP
Sbjct: 1715 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQ 1774
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1775 SPS-YSP 1780
Score = 98.2 bits (243), Expect = 4e-19
Identities = 47/69 (68%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ YSP+ P YSP+
Sbjct: 1708 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPT 1767
Query: 388 STSQYTPKT 362
S S Y+P++
Sbjct: 1768 SPS-YSPQS 1775
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1687 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1746
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1747 SPS-YSPSS 1754
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1624 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1683
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1684 SPS-YSP 1689
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1645 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1704
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1705 SPS-YSP 1710
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1666 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1725
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1726 SPS-YSP 1731
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1603 YSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1662
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1663 SPS-YSP 1668
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP++SPSSPTYSP+SP S TSP YSPSSP++SP S YSP+ P YSP+
Sbjct: 1799 YSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPA 1858
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1859 SPT-YSP 1864
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/69 (66%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP S YSP P YSP
Sbjct: 1722 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPG 1781
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1782 SPS-YSPSS 1789
Score = 94.7 bits (234), Expect = 4e-18
Identities = 47/67 (70%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSP SPSYSP SP+YSPSSP S TSP YSP+SP +SP S +SPS P YSP+
Sbjct: 1764 YSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPA 1823
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1824 SPS-YSP 1829
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP SP+YSP SP S +SP YSP+SP +SP S YSP+ P +SPS
Sbjct: 1757 YSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPS 1816
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1817 SPT-YSP 1822
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS+ YSP+ P YSP+
Sbjct: 1792 YSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPT 1851
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1852 S-PKYSP 1857
Score = 92.4 bits (228), Expect = 2e-17
Identities = 47/69 (68%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SPSYSPTSP YSPSSP YSP+SP S TSP YSP+SP +SP S YSPS P YSP+
Sbjct: 1820 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1879
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1880 SPKGSTYSP 1888
Score = 92.4 bits (228), Expect = 2e-17
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSP+SP YSPTSP+YSP+SP YSP+SP S TSP YSPSSP +SP+ + YSP+ P Y
Sbjct: 1834 YSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSY 1893
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S S Y+P + DD
Sbjct: 1894 SPTSPS-YSPTSPGMGDD 1910
Score = 90.5 bits (223), Expect = 8e-17
Identities = 42/61 (68%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP S YSP+ P YSP+
Sbjct: 1750 YSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPT 1809
Query: 388 S 386
S
Sbjct: 1810 S 1810
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP S YSPS P YSP+
Sbjct: 1785 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPT 1844
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1845 SPT-YSP 1850
Score = 88.6 bits (218), Expect = 3e-16
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+P SP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1597 TPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1656
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1657 PS-YSP 1661
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/74 (64%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSPS
Sbjct: 1694 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1753
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1754 SPKYSPTSPS-YSP 1766
Score = 86.7 bits (213), Expect = 1e-15
Identities = 44/80 (55%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPG---Y 398
YSPTSP YSP+SP YSP+SPTYSP+SP S SP YSP+SP++SPS+ YSP+ P Y
Sbjct: 1827 YSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTY 1886
Query: 397 SPSSTSQYTPKTNDNKDDPG 338
SP+S S + + PG
Sbjct: 1887 SPTSPSYSPTSPSYSPTSPG 1906
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1631 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1690
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1691 SPSYSPTSPS-YSP 1703
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1652 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1711
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1712 SPSYSPTSPS-YSP 1724
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1673 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1732
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1733 SPSYSPTSPS-YSP 1745
Score = 84.0 bits (206), Expect = 7e-15
Identities = 46/83 (55%), Positives = 54/83 (65%), Gaps = 8/83 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP SP +SPS+ YSP+
Sbjct: 1736 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1795
Query: 409 QPGYSPSSTSQYTPKTNDNKDDP 341
P YSP+S S N + P
Sbjct: 1796 SPSYSPTSPSYSPTSPNFSPSSP 1818
Score = 83.2 bits (204), Expect = 1e-14
Identities = 44/70 (62%), Positives = 52/70 (74%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQP----GY 398
YSP SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+ SPS Y
Sbjct: 1617 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPSYSPTSPSY 1673
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1674 SPTSPS-YSP 1682
Score = 80.1 bits (196), Expect = 1e-13
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP SPSYSP SPSYS P+SP+YSP+SP S TSP++SPSSP +SP S YSP+
Sbjct: 1771 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPT 1830
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS +Y+P
Sbjct: 1831 SPKYSPSS-PKYSP 1843
Score = 79.7 bits (195), Expect = 1e-13
Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP++SP+SP+YS P+SP YSPSSP S TSP YSP+SP++SP S YSP+
Sbjct: 1806 YSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPT 1865
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS + Y+P
Sbjct: 1866 SPKYSPSSPT-YSP 1878
Score = 79.3 bits (194), Expect = 2e-13
Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 7/71 (9%)
Frame = -3
Query: 559 PTSPSYSPTSPSY------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 401
P SPSYSP SPSY +P SP YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1578 PMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS 1637
Query: 400 YSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1638 YSPTSPS-YSP 1647
Score = 65.9 bits (159), Expect = 2e-09
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 12/76 (15%)
Frame = -3
Query: 559 PTSPSY-----------SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 416
P SP P SPSYSP+SP+Y P+SP + SP YSP+SP +SP S GYS
Sbjct: 1560 PQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASP-ATPQSPGYSPTSPSYSPTSPGYS 1618
Query: 415 PSQPGYSPSSTSQYTP 368
P+ P YSP+S S Y+P
Sbjct: 1619 PASPSYSPTSPS-YSP 1633
[42][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48671
Length = 1921
Score = 98.6 bits (244), Expect = 3e-19
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP++SP S YSP+ P YSP
Sbjct: 1723 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQ 1782
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1783 SPS-YSP 1788
Score = 98.2 bits (243), Expect = 4e-19
Identities = 47/69 (68%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ YSP+ P YSP+
Sbjct: 1716 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPT 1775
Query: 388 STSQYTPKT 362
S S Y+P++
Sbjct: 1776 SPS-YSPQS 1783
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1695 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1754
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1755 SPS-YSPSS 1762
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1632 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1691
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1692 SPS-YSP 1697
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1653 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1712
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1713 SPS-YSP 1718
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1674 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1733
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1734 SPS-YSP 1739
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1611 YSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1670
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1671 SPS-YSP 1676
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP++SPSSPTYSP+SP S TSP YSPSSP++SP S YSP+ P YSP+
Sbjct: 1807 YSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPA 1866
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1867 SPT-YSP 1872
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/69 (66%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP S YSP P YSP
Sbjct: 1730 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPG 1789
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1790 SPS-YSPSS 1797
Score = 94.7 bits (234), Expect = 4e-18
Identities = 47/67 (70%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSP SPSYSP SP+YSPSSP S TSP YSP+SP +SP S +SPS P YSP+
Sbjct: 1772 YSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPA 1831
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1832 SPS-YSP 1837
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP SP+YSP SP S +SP YSP+SP +SP S YSP+ P +SPS
Sbjct: 1765 YSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPS 1824
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1825 SPT-YSP 1830
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS+ YSP+ P YSP+
Sbjct: 1800 YSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPT 1859
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1860 S-PKYSP 1865
Score = 92.4 bits (228), Expect = 2e-17
Identities = 47/69 (68%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SPSYSPTSP YSPSSP YSP+SP S TSP YSP+SP +SP S YSPS P YSP+
Sbjct: 1828 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1887
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1888 SPKGSTYSP 1896
Score = 92.4 bits (228), Expect = 2e-17
Identities = 46/78 (58%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSP+SP YSPTSP+YSP+SP YSP+SP S TSP YSPSSP +SP+ + YSP+ P Y
Sbjct: 1842 YSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSY 1901
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S S Y+P + DD
Sbjct: 1902 SPTSPS-YSPTSPGMGDD 1918
Score = 90.5 bits (223), Expect = 8e-17
Identities = 42/61 (68%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP S YSP+ P YSP+
Sbjct: 1758 YSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPT 1817
Query: 388 S 386
S
Sbjct: 1818 S 1818
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP S YSPS P YSP+
Sbjct: 1793 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPT 1852
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1853 SPT-YSP 1858
Score = 88.6 bits (218), Expect = 3e-16
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+P SP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1605 TPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1664
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1665 PS-YSP 1669
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/74 (64%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSPS
Sbjct: 1702 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1761
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1762 SPKYSPTSPS-YSP 1774
Score = 86.7 bits (213), Expect = 1e-15
Identities = 44/80 (55%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPG---Y 398
YSPTSP YSP+SP YSP+SPTYSP+SP S SP YSP+SP++SPS+ YSP+ P Y
Sbjct: 1835 YSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTY 1894
Query: 397 SPSSTSQYTPKTNDNKDDPG 338
SP+S S + + PG
Sbjct: 1895 SPTSPSYSPTSPSYSPTSPG 1914
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1639 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1698
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1699 SPSYSPTSPS-YSP 1711
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1719
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1720 SPSYSPTSPS-YSP 1732
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1681 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1740
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1741 SPSYSPTSPS-YSP 1753
Score = 84.0 bits (206), Expect = 7e-15
Identities = 46/83 (55%), Positives = 54/83 (65%), Gaps = 8/83 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP SP +SPS+ YSP+
Sbjct: 1744 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1803
Query: 409 QPGYSPSSTSQYTPKTNDNKDDP 341
P YSP+S S N + P
Sbjct: 1804 SPSYSPTSPSYSPTSPNFSPSSP 1826
Score = 83.2 bits (204), Expect = 1e-14
Identities = 44/70 (62%), Positives = 52/70 (74%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQP----GY 398
YSP SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+ SPS Y
Sbjct: 1625 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPSYSPTSPSY 1681
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1682 SPTSPS-YSP 1690
Score = 80.1 bits (196), Expect = 1e-13
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP SPSYSP SPSYS P+SP+YSP+SP S TSP++SPSSP +SP S YSP+
Sbjct: 1779 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPT 1838
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS +Y+P
Sbjct: 1839 SPKYSPSS-PKYSP 1851
Score = 79.7 bits (195), Expect = 1e-13
Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP++SP+SP+YS P+SP YSPSSP S TSP YSP+SP++SP S YSP+
Sbjct: 1814 YSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPT 1873
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS + Y+P
Sbjct: 1874 SPKYSPSSPT-YSP 1886
Score = 79.3 bits (194), Expect = 2e-13
Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 7/71 (9%)
Frame = -3
Query: 559 PTSPSYSPTSPSY------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 401
P SPSYSP SPSY +P SP YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1586 PMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS 1645
Query: 400 YSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1646 YSPTSPS-YSP 1655
Score = 65.9 bits (159), Expect = 2e-09
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 12/76 (15%)
Frame = -3
Query: 559 PTSPSY-----------SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 416
P SP P SPSYSP+SP+Y P+SP + SP YSP+SP +SP S GYS
Sbjct: 1568 PQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASP-ATPQSPGYSPTSPSYSPTSPGYS 1626
Query: 415 PSQPGYSPSSTSQYTP 368
P+ P YSP+S S Y+P
Sbjct: 1627 PASPSYSPTSPS-YSP 1641
[43][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD271
Length = 1749
Score = 98.6 bits (244), Expect = 3e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPT 1701
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1702 SPS-YSP 1707
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1681 S-PQYSP 1686
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1558 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1617
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1618 SPS-YSP 1623
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1579 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1638
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1639 SPS-YSP 1644
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1600 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1659
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1660 SPS-YSP 1665
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1722
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1723 S-PQYSP 1728
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1551 YGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1610
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1611 SPS-YSP 1616
Score = 89.0 bits (219), Expect = 2e-16
Identities = 46/74 (62%), Positives = 51/74 (68%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ YSP P YSP S
Sbjct: 1684 YSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQ------YSPGSPLYSPES 1737
Query: 385 TSQYTPKTNDNKDD 344
S K+ D K D
Sbjct: 1738 ES----KSKDEKKD 1747
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1565 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1624
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1625 SPSYSPTSPS-YSP 1637
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1586 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1645
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1646 SPSYSPTSPS-YSP 1658
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1607 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPS-YSP 1679
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPT 1708
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1709 SPQYSPTS-PQYSP 1721
Score = 84.7 bits (208), Expect = 4e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1687
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1688 SPQYSPTSPS-YSP 1700
Score = 82.8 bits (203), Expect = 2e-14
Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 380
TSP Y TSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1547 TSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1606
Query: 379 QYTP 368
Y+P
Sbjct: 1607 -YSP 1609
[44][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 98.6 bits (244), Expect = 3e-19
Identities = 48/67 (71%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP + TSP YSP+SP +SP S GYSP+ P YSPS
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPS 1700
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1701 SPS-YSP 1706
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPT 1679
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1680 SPS-YSP 1685
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/63 (73%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSPSSP S TSP YSP+SP +SP S YSPS P YSP+
Sbjct: 1676 YSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPT 1735
Query: 388 STS 380
S S
Sbjct: 1736 SPS 1738
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSY+P+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1599 YSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1659 SPA-YSP 1664
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/69 (65%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSY+PTSP+YSP+SP+YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+
Sbjct: 1662 YSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPT 1721
Query: 388 STSQYTPKT 362
S +Y+P +
Sbjct: 1722 S-PRYSPSS 1729
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1585 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1645 SPS-YSP 1650
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/77 (57%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1613 YAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPT 1672
Query: 388 STSQYTPKTNDNKDDPG 338
S + + + PG
Sbjct: 1673 SPAYSPTSPSYSPTSPG 1689
Score = 94.0 bits (232), Expect = 7e-18
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSP+YSPTSPSY+P+SP YSP+SP S TSP YSP+SP +SPS+ YSP+ P YSP+
Sbjct: 1655 YSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPT 1714
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1715 SPA-YSP 1720
Score = 93.6 bits (231), Expect = 9e-18
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP YSP+SP S TSP Y+P+SP +SP S YSP+ P YSP+
Sbjct: 1578 YSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1638 SPS-YSP 1643
Score = 92.0 bits (227), Expect = 3e-17
Identities = 45/67 (67%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S GYSP+ P YSP+
Sbjct: 1550 YSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPT 1609
Query: 388 STSQYTP 368
S S Y P
Sbjct: 1610 SPS-YAP 1615
Score = 91.7 bits (226), Expect = 4e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPT 1623
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1624 SPS-YSP 1629
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1557 YSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPT 1616
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1617 SPS-YSP 1622
Score = 90.1 bits (222), Expect = 1e-16
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSP SP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ PGYSP+
Sbjct: 1543 YSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPT 1602
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1603 SPS-YSP 1608
Score = 89.0 bits (219), Expect = 2e-16
Identities = 41/57 (71%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGY 398
YSPTSP YSPTSPSYSPSSP+YSP+SP S TSP YSP+SP++SPS+ YSP+ P Y
Sbjct: 1683 YSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPTSPSY 1739
Score = 86.7 bits (213), Expect = 1e-15
Identities = 42/67 (62%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SP+SP YSP+SP YSP SP YSP+SP S TSP YSP+SP +SP S GYSP+ P YSP+
Sbjct: 1536 FSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPT 1595
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1596 SPG-YSP 1601
Score = 73.6 bits (179), Expect = 1e-11
Identities = 37/52 (71%), Positives = 41/52 (78%), Gaps = 3/52 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP---QFSPSTGY 419
YSPTSPSYSP+SPSYSP+SP+YSP+SP S TSP YSPSSP SPS Y
Sbjct: 1690 YSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPTSPSYRY 1741
Score = 71.2 bits (173), Expect = 5e-11
Identities = 36/69 (52%), Positives = 43/69 (62%)
Frame = -3
Query: 544 YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPK 365
+SP+SP YSPSSP YSP SP S TSP YSP+SP GYSP+ PGYSP+S
Sbjct: 1536 FSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSP------GYSPTSPGYSPTSPGYSPTS 1589
Query: 364 TNDNKDDPG 338
+ + PG
Sbjct: 1590 PSYSPTSPG 1598
Score = 68.9 bits (167), Expect = 2e-10
Identities = 39/61 (63%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
Frame = -3
Query: 538 PTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 371
P SPS SPSSP YSP SP S TSP YSP+SP +SP S GYSP+ PGYSP+S S Y+
Sbjct: 1535 PFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPS-YS 1593
Query: 370 P 368
P
Sbjct: 1594 P 1594
[45][TOP]
>UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R4Y0_PICPG
Length = 1743
Score = 98.6 bits (244), Expect = 3e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1602 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1661
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1662 S-PQYSP 1667
Score = 98.2 bits (243), Expect = 4e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1588 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPT 1647
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1648 S-PQYSP 1653
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1560 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1619
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1620 SPS-YSP 1625
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1581 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1640
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1641 S-PQYSP 1646
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1553 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1612
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1613 SPS-YSP 1618
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1623 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1682
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1683 S-PQYSP 1688
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1644 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1703
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1704 S-PQYSP 1709
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1665 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPA 1724
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1725 S-PQYSP 1730
Score = 92.0 bits (227), Expect = 3e-17
Identities = 44/63 (69%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSPS
Sbjct: 1672 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPASPQYSPS 1731
Query: 388 STS 380
S
Sbjct: 1732 RHS 1734
Score = 91.3 bits (225), Expect = 5e-17
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
++PTSP YSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1546 FAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1605
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1606 SPS-YSP 1611
Score = 87.4 bits (215), Expect = 7e-16
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
++PTSP ++PTSP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1539 FAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1598
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1599 SPS-YSP 1604
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/74 (64%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP YSP+SP S TSP YSP+SPQ+SP S YSP+
Sbjct: 1609 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1668
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1669 SPQYSPTS-PQYSP 1681
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1567 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1626
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1627 SPQYSPTS-PQYSP 1639
Score = 83.6 bits (205), Expect = 1e-14
Identities = 46/74 (62%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP YS P+SP YSP+SP S TSP YSP+SPQ+SP S YSP+
Sbjct: 1630 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1689
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1690 SPQYSPTS-PQYSP 1702
Score = 83.6 bits (205), Expect = 1e-14
Identities = 46/74 (62%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP YS P+SP YSP+SP S TSP YSP+SPQ+SP S YSP+
Sbjct: 1651 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1710
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1711 SPQYSPTS-PQYSP 1723
Score = 82.0 bits (201), Expect = 3e-14
Identities = 39/66 (59%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
S TSP ++PTSP ++P+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1533 SATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1592
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1593 PS-YSP 1597
Score = 80.1 bits (196), Expect = 1e-13
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPS 410
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SPS +SP+
Sbjct: 1686 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPASPQYSPSR-HSPN 1736
Score = 79.7 bits (195), Expect = 1e-13
Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y PTSP S TSP ++P+SP ++P+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1525 YQPTSPGLSATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPT 1584
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1585 SPS-YSP 1590
Score = 59.7 bits (143), Expect = 1e-07
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+ Y PTSP S +SP ++P TSP ++P+SP++SP S GYSP+ P YSP+
Sbjct: 1518 YAGIQSPYQPTSPGLSATSPGFAP-------TSPGFAPTSPRYSPTSPGYSPTSPSYSPT 1570
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1571 SPS-YSP 1576
[46][TOP]
>UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RSM9_DEBHA
Length = 1749
Score = 98.6 bits (244), Expect = 3e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPT 1701
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1702 SPS-YSP 1707
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1681 S-PQYSP 1686
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1558 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1617
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1618 SPS-YSP 1623
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1579 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1638
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1639 SPS-YSP 1644
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1600 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1659
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1660 SPS-YSP 1665
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1722
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1723 S-PQYSP 1728
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1551 YGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1610
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1611 SPS-YSP 1616
Score = 90.5 bits (223), Expect = 8e-17
Identities = 46/74 (62%), Positives = 51/74 (68%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ YSP P YSP S
Sbjct: 1684 YSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQ------YSPGSPSYSPES 1737
Query: 385 TSQYTPKTNDNKDD 344
S K+ D K D
Sbjct: 1738 ES----KSKDEKKD 1747
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1565 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1624
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1625 SPSYSPTSPS-YSP 1637
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1586 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1645
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1646 SPSYSPTSPS-YSP 1658
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1607 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPS-YSP 1679
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPT 1708
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1709 SPQYSPTS-PQYSP 1721
Score = 84.7 bits (208), Expect = 4e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1687
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1688 SPQYSPTSPS-YSP 1700
Score = 82.8 bits (203), Expect = 2e-14
Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 380
TSP Y TSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1547 TSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1606
Query: 379 QYTP 368
Y+P
Sbjct: 1607 -YSP 1609
[47][TOP]
>UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
RepID=A1YIA7_ISSOR
Length = 1647
Score = 98.6 bits (244), Expect = 3e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1540 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1599
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1600 S-PQYSP 1605
Score = 98.2 bits (243), Expect = 4e-19
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1526 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPT 1585
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1586 S-PQYSP 1591
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1519 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1578
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1579 S-PQYSP 1584
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1498 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1557
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1558 SPS-YSP 1563
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1512 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1571
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1572 S-PQYSP 1577
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1561 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1620
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1621 S-PQYSP 1626
Score = 94.4 bits (233), Expect = 5e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1582 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1641
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1642 SPS-YSP 1647
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1491 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1550
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1551 SPS-YSP 1556
Score = 93.6 bits (231), Expect = 9e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1477 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPT 1536
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1537 SPS-YSP 1542
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y PTSPSYSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1470 YGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1529
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1530 SPS-YSP 1535
Score = 91.7 bits (226), Expect = 4e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y PTSPSY PTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1463 YGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1522
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1523 SPA-YSP 1528
Score = 87.4 bits (215), Expect = 7e-16
Identities = 42/67 (62%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y TSPSY PTSPSY P+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1456 YGATSPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1515
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1516 SPA-YSP 1521
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/74 (64%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP YSP+SP S TSP YSP+SPQ+SP S YSP+
Sbjct: 1547 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1606
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1607 SPQYSPTS-PQYSP 1619
Score = 83.6 bits (205), Expect = 1e-14
Identities = 46/74 (62%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP YS P+SP YSP+SP S TSP YSP+SPQ+SP S YSP+
Sbjct: 1568 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1627
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1628 SPQYSPTS-PQYSP 1640
[48][TOP]
>UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR
Length = 1706
Score = 98.2 bits (243), Expect = 4e-19
Identities = 47/75 (62%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1629 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1688
Query: 388 STSQYTPKTNDNKDD 344
S + Y+P D+K D
Sbjct: 1689 SPA-YSPSGGDDKKD 1702
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1524 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1583
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1584 SPA-YSP 1589
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1545 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1604
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1605 SPA-YSP 1610
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1566 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1625
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1626 SPA-YSP 1631
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1587 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1646
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1647 SPA-YSP 1652
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1667
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1668 SPA-YSP 1673
Score = 92.0 bits (227), Expect = 3e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1517 YSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1576
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1577 SPA-YSP 1582
Score = 83.2 bits (204), Expect = 1e-14
Identities = 40/63 (63%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP+YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S +
Sbjct: 1514 SPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA- 1572
Query: 376 YTP 368
Y+P
Sbjct: 1573 YSP 1575
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1531 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1590
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1591 SPAYSPTSPA-YSP 1603
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1552 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1611
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1612 SPAYSPTSPA-YSP 1624
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1573 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1632
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1633 SPAYSPTSPA-YSP 1645
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1594 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1653
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1654 SPAYSPTSPA-YSP 1666
Score = 59.3 bits (142), Expect = 2e-07
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 4/59 (6%)
Frame = -3
Query: 532 SPSYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 368
SP+YSP S +Y S Y +G SP YSP+SPQ+SP S YSP+ P YSP+S + Y+P
Sbjct: 1490 SPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPAYSPTSPA-YSP 1547
Score = 57.4 bits (137), Expect = 7e-07
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Frame = -3
Query: 553 SPSYSPTSPSYSP--SSPTYSPS-SPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SP+YSP S SY +S +Y SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1490 SPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTS 1549
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1550 PA-YSP 1554
[49][TOP]
>UniRef100_Q9BMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=Q9BMP3_MONBE
Length = 1743
Score = 98.2 bits (243), Expect = 4e-19
Identities = 47/70 (67%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1648 YSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPT 1707
Query: 388 STSQYTPKTN 359
S S Y+P N
Sbjct: 1708 SPS-YSPTAN 1716
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1634 YSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPT 1693
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1694 SPS-YSP 1699
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/75 (62%), Positives = 56/75 (74%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------STGYSP 413
YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP S GYSP
Sbjct: 1669 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSP 1728
Query: 412 SQPGYSPSSTSQYTP 368
+ PGYSP+S Y+P
Sbjct: 1729 TSPGYSPTSPG-YSP 1742
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP S YSP+ P YSP+
Sbjct: 1627 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1686
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1687 SPN-YSP 1692
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1620 YSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPT 1679
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1680 SPS-YSP 1685
Score = 93.2 bits (230), Expect = 1e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSP+SPSYSP+SP YSP+SP S TSP+YSP+SP +SP S YSP+ P YSP+
Sbjct: 1613 YSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1672
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1673 SPN-YSP 1678
Score = 92.8 bits (229), Expect = 2e-17
Identities = 45/66 (68%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SPTSP YSPTSP YSPSSP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1607 SPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTS 1666
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1667 PS-YSP 1671
Score = 90.5 bits (223), Expect = 8e-17
Identities = 49/83 (59%), Positives = 56/83 (67%), Gaps = 17/83 (20%)
Frame = -3
Query: 565 YSPTSPSYSPTSP--------SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP------- 431
YSPTSPSYSPTSP SYSP+SP+YSPSSP + SP YSP+SP +SP
Sbjct: 1548 YSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKS 1607
Query: 430 --STGYSPSQPGYSPSSTSQYTP 368
S GYSP+ PGYSPSS S Y+P
Sbjct: 1608 PTSPGYSPTSPGYSPSSPS-YSP 1629
Score = 85.5 bits (210), Expect = 3e-15
Identities = 44/68 (64%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY-SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSPTSPSYSPTSP+ SP+SP YSP+SP S +SP YSP+SP +SP S YSP+ P YSP
Sbjct: 1591 YSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSP 1650
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1651 TSPS-YSP 1657
Score = 84.0 bits (206), Expect = 7e-15
Identities = 45/75 (60%), Positives = 56/75 (74%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY-------SPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPST-GYSP 413
YSPTSPSYSP+SP+Y SP+SP+YSP+SP S TSP YSP+SP +SPS+ YSP
Sbjct: 1570 YSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSP 1629
Query: 412 SQPGYSPSSTSQYTP 368
+ P YSP+S S Y+P
Sbjct: 1630 TSPNYSPTSPS-YSP 1643
Score = 80.5 bits (197), Expect = 8e-14
Identities = 41/70 (58%), Positives = 48/70 (68%), Gaps = 10/70 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGTSPDYSPSSPQFSP---------STGYS 416
YSPTSPSYSPTSP SP+SP +SP+SP + TSP YSP+SP +SP S YS
Sbjct: 1512 YSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYS 1571
Query: 415 PSQPGYSPSS 386
P+ P YSPSS
Sbjct: 1572 PTSPSYSPSS 1581
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSGT-SPDYSPSSPQFSPST--------GYS 416
+SP SP+ ++PTSP YSP+SP+YSP+SP G SP YSP+SP +SPS+ YS
Sbjct: 1533 FSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYS 1592
Query: 415 PSQPGYSPSSTSQYTP 368
P+ P YSP+S + +P
Sbjct: 1593 PTSPSYSPTSPNVKSP 1608
Score = 71.2 bits (173), Expect = 5e-11
Identities = 35/54 (64%), Positives = 41/54 (75%), Gaps = 8/54 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPS--------SPYNSGTSPDYSPSSPQFSPS 428
YSPTSPSYSPTSP+YSP+SP+YSP+ SP S TSP YSP+SP +SPS
Sbjct: 1690 YSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPGYSPTSPGYSPS 1743
Score = 67.0 bits (162), Expect = 9e-10
Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 3/59 (5%)
Frame = -3
Query: 553 SPSYSPTSPS-YSPSSPTYSPSSPYNSGTSPDYSPSSPQ-FSP-STGYSPSQPGYSPSS 386
SP Y P+SP+ YSP+SP+YSP+SP S TSP +SP+SP F+P S YSP+ P YSP+S
Sbjct: 1501 SPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTS 1559
Score = 63.9 bits (154), Expect = 8e-09
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPGYSPSST 383
SP SP Y PSSP YSP+SP S TSP SP+SP FSP++ G++P+ P YSP+S
Sbjct: 1494 SPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSP 1553
Query: 382 SQYTP 368
S Y+P
Sbjct: 1554 S-YSP 1557
[50][TOP]
>UniRef100_A9V5W6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V5W6_MONBE
Length = 1307
Score = 98.2 bits (243), Expect = 4e-19
Identities = 47/70 (67%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1212 YSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPT 1271
Query: 388 STSQYTPKTN 359
S S Y+P N
Sbjct: 1272 SPS-YSPTAN 1280
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1198 YSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPT 1257
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1258 SPS-YSP 1263
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/75 (62%), Positives = 56/75 (74%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------STGYSP 413
YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP S GYSP
Sbjct: 1233 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSP 1292
Query: 412 SQPGYSPSSTSQYTP 368
+ PGYSP+S Y+P
Sbjct: 1293 TSPGYSPTSPG-YSP 1306
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP S YSP+ P YSP+
Sbjct: 1191 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1250
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1251 SPN-YSP 1256
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1184 YSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPT 1243
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1244 SPS-YSP 1249
Score = 93.2 bits (230), Expect = 1e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSP+SPSYSP+SP YSP+SP S TSP+YSP+SP +SP S YSP+ P YSP+
Sbjct: 1177 YSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1236
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1237 SPN-YSP 1242
Score = 92.8 bits (229), Expect = 2e-17
Identities = 45/66 (68%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SPTSP YSPTSP YSPSSP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1171 SPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTS 1230
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1231 PS-YSP 1235
Score = 90.5 bits (223), Expect = 8e-17
Identities = 49/83 (59%), Positives = 56/83 (67%), Gaps = 17/83 (20%)
Frame = -3
Query: 565 YSPTSPSYSPTSP--------SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP------- 431
YSPTSPSYSPTSP SYSP+SP+YSPSSP + SP YSP+SP +SP
Sbjct: 1112 YSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKS 1171
Query: 430 --STGYSPSQPGYSPSSTSQYTP 368
S GYSP+ PGYSPSS S Y+P
Sbjct: 1172 PTSPGYSPTSPGYSPSSPS-YSP 1193
Score = 85.5 bits (210), Expect = 3e-15
Identities = 44/68 (64%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY-SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSPTSPSYSPTSP+ SP+SP YSP+SP S +SP YSP+SP +SP S YSP+ P YSP
Sbjct: 1155 YSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSP 1214
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1215 TSPS-YSP 1221
Score = 84.0 bits (206), Expect = 7e-15
Identities = 45/75 (60%), Positives = 56/75 (74%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY-------SPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPST-GYSP 413
YSPTSPSYSP+SP+Y SP+SP+YSP+SP S TSP YSP+SP +SPS+ YSP
Sbjct: 1134 YSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSP 1193
Query: 412 SQPGYSPSSTSQYTP 368
+ P YSP+S S Y+P
Sbjct: 1194 TSPNYSPTSPS-YSP 1207
Score = 80.5 bits (197), Expect = 8e-14
Identities = 41/70 (58%), Positives = 48/70 (68%), Gaps = 10/70 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGTSPDYSPSSPQFSP---------STGYS 416
YSPTSPSYSPTSP SP+SP +SP+SP + TSP YSP+SP +SP S YS
Sbjct: 1076 YSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYS 1135
Query: 415 PSQPGYSPSS 386
P+ P YSPSS
Sbjct: 1136 PTSPSYSPSS 1145
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSGT-SPDYSPSSPQFSPST--------GYS 416
+SP SP+ ++PTSP YSP+SP+YSP+SP G SP YSP+SP +SPS+ YS
Sbjct: 1097 FSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYS 1156
Query: 415 PSQPGYSPSSTSQYTP 368
P+ P YSP+S + +P
Sbjct: 1157 PTSPSYSPTSPNVKSP 1172
Score = 71.2 bits (173), Expect = 5e-11
Identities = 35/54 (64%), Positives = 41/54 (75%), Gaps = 8/54 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPS--------SPYNSGTSPDYSPSSPQFSPS 428
YSPTSPSYSPTSP+YSP+SP+YSP+ SP S TSP YSP+SP +SPS
Sbjct: 1254 YSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPGYSPTSPGYSPS 1307
Score = 67.0 bits (162), Expect = 9e-10
Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 3/59 (5%)
Frame = -3
Query: 553 SPSYSPTSPS-YSPSSPTYSPSSPYNSGTSPDYSPSSPQ-FSP-STGYSPSQPGYSPSS 386
SP Y P+SP+ YSP+SP+YSP+SP S TSP +SP+SP F+P S YSP+ P YSP+S
Sbjct: 1065 SPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTS 1123
Score = 63.9 bits (154), Expect = 8e-09
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPGYSPSST 383
SP SP Y PSSP YSP+SP S TSP SP+SP FSP++ G++P+ P YSP+S
Sbjct: 1058 SPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSP 1117
Query: 382 SQYTP 368
S Y+P
Sbjct: 1118 S-YSP 1121
[51][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CBQ3_YARLI
Length = 1750
Score = 98.2 bits (243), Expect = 4e-19
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP T YSP+ P YSP+S
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP-TSYSPTSPSYSPTS 1677
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1678 PS-YSP 1682
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1658 SPS-YSP 1663
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1591 YSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1651 SPS-YSP 1656
Score = 93.6 bits (231), Expect = 9e-18
Identities = 51/93 (54%), Positives = 61/93 (65%), Gaps = 20/93 (21%)
Frame = -3
Query: 565 YSPTSPSYSPTS-----PSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS--PSTGYSPSQ 407
YSPTSPSYSPTS PSYSP+SP+YSP+SP S TSP YSPSSP+F+ ST YSP+
Sbjct: 1654 YSPTSPSYSPTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKFNAGASTSYSPTS 1713
Query: 406 PGYSPSSTS-------------QYTPKTNDNKD 347
P YSP+S S Y+P + D+KD
Sbjct: 1714 PSYSPTSPSYSPTSPSYSPTSPSYSPGSGDSKD 1746
Score = 90.5 bits (223), Expect = 8e-17
Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 6/66 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YN----SGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP Y+ S TSP YSP+SP +SP S YSP+ P
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1692
Query: 403 GYSPSS 386
YSPSS
Sbjct: 1693 SYSPSS 1698
Score = 90.1 bits (222), Expect = 1e-16
Identities = 43/67 (64%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
++ TSPSYSP+SPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1584 FAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1643
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1644 SPS-YSP 1649
Score = 88.6 bits (218), Expect = 3e-16
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SP+SP+++ TSPSYSPSSP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1577 FSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1637 SPS-YSP 1642
Score = 79.7 bits (195), Expect = 1e-13
Identities = 38/63 (60%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SPS+SP+SP+++ +SP+YSPSSP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1574 SPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS- 1632
Query: 376 YTP 368
Y+P
Sbjct: 1633 YSP 1635
Score = 75.9 bits (185), Expect = 2e-12
Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS--PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
++ TSPSYSP+SP +SP++SPSSP + TSP YSPSSP +SP S YSP+ P YS
Sbjct: 1554 FAATSPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYS 1613
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1614 PTSPS-YSP 1621
Score = 66.2 bits (160), Expect = 2e-09
Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSP--SYSPTSPSYSPSSPTYSPSSPYNS--GTSPDYSPSSPQFSP-STGYSPSQPG 401
Y+PTSP S+ SP ++ +SP+YSPSSP SP +SPSSP F+ S YSPS P
Sbjct: 1538 YTPTSPFSSFGAASPGFAATSPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPS 1597
Query: 400 YSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1598 YSPTSPS-YSP 1607
[52][TOP]
>UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DXL0_ZYGRC
Length = 1744
Score = 98.2 bits (243), Expect = 4e-19
Identities = 49/75 (65%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP P YSPS
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPGSPTYSPS 1730
Query: 388 STSQYTPKTNDNKDD 344
S PK +D + D
Sbjct: 1731 S-----PKQDDREKD 1740
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1626 SPS-YSP 1631
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1647 SPS-YSP 1652
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1661 SPS-YSP 1666
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPT 1688
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1689 SPS-YSP 1694
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1710 SPS-YSP 1715
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1545 YSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1605 SPS-YSP 1610
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1668 SPN-YSP 1673
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SP+SP+YSPTSPSYSP+SP+YSP SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1538 FSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1598 SPS-YSP 1603
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPS-YSP 1645
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1674
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPS-YSP 1687
Score = 82.8 bits (203), Expect = 2e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSP SP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1552 YSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1612 SPSYSPTSPS-YSP 1624
Score = 81.3 bits (199), Expect = 5e-14
Identities = 38/64 (59%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 380
+SP +SP+SP+YSP+SP+YSP+SP S SP+YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1534 SSPGFSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1593
Query: 379 QYTP 368
Y+P
Sbjct: 1594 -YSP 1596
[53][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
Length = 1752
Score = 98.2 bits (243), Expect = 4e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1578 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1638 SPS-YSP 1643
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1673 SPS-YSP 1678
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1693
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1694 SPS-YSP 1699
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1714
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1715 SPS-YSP 1720
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1676 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1735
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1736 SPS-YSP 1741
Score = 94.4 bits (233), Expect = 5e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYS TSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1599 YSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1659 SPS-YSP 1664
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y P+SPSYSPTSPSYSP+SP+YSP+SP S TSP YS +SP +SP S YSP+ P YSP+
Sbjct: 1571 YMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPT 1630
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1631 SPS-YSP 1636
Score = 87.8 bits (216), Expect = 5e-16
Identities = 42/62 (67%), Positives = 48/62 (77%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP YSP+ P YSP+S
Sbjct: 1697 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP------SYSPTSPSYSPTS 1750
Query: 385 TS 380
S
Sbjct: 1751 PS 1752
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1679
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1680 SPSYSPTSPS-YSP 1692
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1701 SPSYSPTSPS-YSP 1713
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1721
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1722 SPSYSPTSPS-YSP 1734
Score = 85.1 bits (209), Expect = 3e-15
Identities = 43/63 (68%), Positives = 49/63 (77%), Gaps = 4/63 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP---GY 398
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1742
Query: 397 SPS 389
SPS
Sbjct: 1743 SPS 1745
Score = 83.2 bits (204), Expect = 1e-14
Identities = 43/73 (58%), Positives = 53/73 (72%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYS------PTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-PSTGYSPSQ 407
YSP+SP YS P+SPSYSP+SP+YSP+SP S TSP YSP+SP +S S YSP+
Sbjct: 1558 YSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTS 1617
Query: 406 PGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1618 PSYSPTSPS-YSP 1629
Score = 73.9 bits (180), Expect = 8e-12
Identities = 42/72 (58%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYS------PSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
S SP Y TSPSYSPSSP YS PSSP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1545 SAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1604
Query: 403 GYSPSSTSQYTP 368
YS +S S Y+P
Sbjct: 1605 SYSATSPS-YSP 1615
Score = 67.8 bits (164), Expect = 5e-10
Identities = 38/64 (59%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 380
TSP S SP Y +SP+YSPSSP S TSP Y PSSP +SP S YSP+ P YSP+S S
Sbjct: 1540 TSPFSSAMSPGYGLTSPSYSPSSPGYS-TSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPS 1598
Query: 379 QYTP 368
Y+P
Sbjct: 1599 -YSP 1601
Score = 54.7 bits (130), Expect = 5e-06
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQY 374
SP SP Y+ SP S SP TSP YSPSSP +S S Y PS P YSP+S S Y
Sbjct: 1529 SPYKGVQSPGYT--SPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPS-Y 1585
Query: 373 TP 368
+P
Sbjct: 1586 SP 1587
[54][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179348F
Length = 1862
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1730 SPS-YSPSS 1737
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1709 SPS-YSP 1714
Score = 96.3 bits (238), Expect = 1e-18
Identities = 48/67 (71%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS P Y+ S
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAAS 1743
Query: 388 STSQYTP 368
S S YTP
Sbjct: 1744 SPS-YTP 1749
Score = 91.3 bits (225), Expect = 5e-17
Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 6/72 (8%)
Frame = -3
Query: 565 YSPTSPSYS-----PTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSPSYS PTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1637 YSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1696
Query: 403 GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1697 SYSPTSPS-YSP 1707
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/103 (46%), Positives = 60/103 (58%), Gaps = 27/103 (26%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG------------ 422
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSPQ++ S+
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTPSATSGTSN 1757
Query: 421 ---------------YSPSQPGYSPSSTSQYTPKTNDNKDDPG 338
YSP+ P YSPS+ S Y+P + + + G
Sbjct: 1758 YKYSPTSPSLAVSPTYSPTSPMYSPSNAS-YSPSSLQHTPNAG 1799
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1716 SPSYSPTSPS-YSP 1728
Score = 85.9 bits (211), Expect = 2e-15
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYS +S YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1630 YSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1688 SPS-YSP 1693
Score = 75.5 bits (184), Expect = 3e-12
Identities = 42/69 (60%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
YS SP+Y SPTSPSYSP+SP+YS +S S TSP YSP+SP +SP S YSP+ P YS
Sbjct: 1621 YSSMSPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1678
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1679 PTSPS-YSP 1686
Score = 70.9 bits (172), Expect = 6e-11
Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 13/79 (16%)
Frame = -3
Query: 565 YSPTSPSYSPT----------SPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 425
YSPTSP YS T SP+Y SP+SP+YSP+SP S TS YSP+SP +SP S
Sbjct: 1604 YSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSP 1661
Query: 424 GYSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1662 SYSPTSPSYSPTSPS-YSP 1679
Score = 67.0 bits (162), Expect = 9e-10
Identities = 45/93 (48%), Positives = 52/93 (55%), Gaps = 18/93 (19%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSS-------------PTYSPSSPYNSGT-----SPDYSPSSPQ 440
YSPTSP YSP++ SYSPSS +YSPSSP S T SP YSP+SP
Sbjct: 1773 YSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTNFSMASPRYSPTSPT 1832
Query: 439 FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDP 341
+SP G P YSPSS S Y+P T+ N P
Sbjct: 1833 YSPGVG----SPHYSPSSPS-YSP-TSPNYSGP 1859
Score = 62.8 bits (151), Expect = 2e-08
Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-------YSPSQ 407
YSPTSPS + SP+YSP+SP YSPS + YSPSS Q +P+ G YSPS
Sbjct: 1760 YSPTSPSLA-VSPTYSPTSPMYSPS-------NASYSPSSLQHTPNAGGTQYNQSYSPSS 1811
Query: 406 PGYSPSSTSQYTPK 365
P YSP++ S +P+
Sbjct: 1812 PVYSPTNFSMASPR 1825
[55][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179338A
Length = 1862
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1730 SPS-YSPSS 1737
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1709 SPS-YSP 1714
Score = 96.3 bits (238), Expect = 1e-18
Identities = 48/67 (71%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS P Y+ S
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYTAS 1743
Query: 388 STSQYTP 368
S S YTP
Sbjct: 1744 SPS-YTP 1749
Score = 91.3 bits (225), Expect = 5e-17
Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 6/72 (8%)
Frame = -3
Query: 565 YSPTSPSYS-----PTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSPSYS PTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1637 YSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1696
Query: 403 GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1697 SYSPTSPS-YSP 1707
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1716 SPSYSPTSPS-YSP 1728
Score = 85.9 bits (211), Expect = 2e-15
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYS +S YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1630 YSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1688 SPS-YSP 1693
Score = 84.3 bits (207), Expect = 6e-15
Identities = 45/96 (46%), Positives = 58/96 (60%), Gaps = 20/96 (20%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST------------- 425
YSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP Y+ SSP ++PS
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSYTPSATSGASNYKYSPTS 1764
Query: 424 -------GYSPSQPGYSPSSTSQYTPKTNDNKDDPG 338
YSP+ P YSPS+ S Y+P + + + G
Sbjct: 1765 PSLAVSPTYSPTSPMYSPSNAS-YSPSSVQHTPNAG 1799
Score = 77.8 bits (190), Expect = 5e-13
Identities = 43/69 (62%), Positives = 49/69 (71%), Gaps = 7/69 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQ 407
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSPSSPQ Y+ S
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQ------YTASS 1744
Query: 406 PGYSPSSTS 380
P Y+PS+TS
Sbjct: 1745 PSYTPSATS 1753
Score = 75.5 bits (184), Expect = 3e-12
Identities = 42/69 (60%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
YS SP+Y SPTSPSYSP+SP+YS +S S TSP YSP+SP +SP S YSP+ P YS
Sbjct: 1621 YSSMSPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1678
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1679 PTSPS-YSP 1686
Score = 73.2 bits (178), Expect = 1e-11
Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 21/88 (23%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSS-------------PTYSPSSPYNSGT-----SPDYSPSSPQ 440
YSPTSP YSP++ SYSPSS +YSPSSP S T SP YSP+SP
Sbjct: 1773 YSPTSPMYSPSNASYSPSSVQHTPNAGVTQYNQSYSPSSPVYSPTNFSLASPRYSPTSPT 1832
Query: 439 FSPSTG---YSPSQPGYSPSSTSQYTPK 365
+SP G YSPS P YSP+S + P+
Sbjct: 1833 YSPGVGSPNYSPSSPSYSPTSPNYSGPE 1860
Score = 70.9 bits (172), Expect = 6e-11
Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 13/79 (16%)
Frame = -3
Query: 565 YSPTSPSYSPT----------SPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 425
YSPTSP YS T SP+Y SP+SP+YSP+SP S TS YSP+SP +SP S
Sbjct: 1604 YSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSP 1661
Query: 424 GYSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1662 SYSPTSPSYSPTSPS-YSP 1679
Score = 53.9 bits (128), Expect = 8e-06
Identities = 30/49 (61%), Positives = 32/49 (65%), Gaps = 7/49 (14%)
Frame = -3
Query: 565 YSPT-----SPSYSPTSPSYSPS--SPTYSPSSPYNSGTSPDYSPSSPQ 440
YSPT SP YSPTSP+YSP SP YSPSSP S TSP+YS Q
Sbjct: 1814 YSPTNFSLASPRYSPTSPTYSPGVGSPNYSPSSPSYSPTSPNYSGPEEQ 1862
[56][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Pan troglodytes RepID=UPI0000E24648
Length = 1913
Score = 97.8 bits (242), Expect = 5e-19
Identities = 49/82 (59%), Positives = 57/82 (69%), Gaps = 7/82 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STS------QYTPKTNDNKDDP 341
S S Y P D+ P
Sbjct: 1717 SPSYSPTSQSYHPTVVDSSTSP 1738
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 92.4 bits (228), Expect = 2e-17
Identities = 46/75 (61%), Positives = 55/75 (73%), Gaps = 7/75 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-------STGYSPSQ 407
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+S + P S YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSPSYSPTS 1744
Query: 406 PGYSPSSTSQYTPKT 362
P YSPSS +YTP++
Sbjct: 1745 PSYSPSS-PRYTPQS 1758
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1817 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1876
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1877 SPKGSTYSP 1885
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1768 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1826
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1827 TTPKYSP 1833
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1775 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1834
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1835 SPT-YSP 1840
Score = 89.7 bits (221), Expect = 1e-16
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSP+SP Y+P SPTY+PSSP S +SP YSP+SP+++P S YSPS P Y+P+
Sbjct: 1740 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1799
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1800 S-PKYSP 1805
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1803 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1862
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1863 S-PKYSP 1868
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1831 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1890
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1891 SPTSPTYSLTSPAISPDD 1908
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/87 (55%), Positives = 57/87 (65%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-------------YNSGTSPDYSPSSPQFSPST 425
YSPTSPSYSPTSPSYSP+SP+YSP+SP +S TSP YSP+SP +SPS+
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPSYSPSS 1751
Query: 424 --------GYSPSQPGYSPSSTSQYTP 368
Y+PS P YSPSS S Y+P
Sbjct: 1752 PRYTPQSPTYTPSSPSYSPSSPS-YSP 1777
Score = 89.0 bits (219), Expect = 2e-16
Identities = 44/66 (66%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
S TSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPSS
Sbjct: 1734 SSTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS 1793
Query: 385 TSQYTP 368
+YTP
Sbjct: 1794 -PEYTP 1798
Score = 88.6 bits (218), Expect = 3e-16
Identities = 41/69 (59%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P+SPSYSP+SPSYSP+SP Y+P+SP S +SP+Y+P+SP++SP S YSP+ P YSP+
Sbjct: 1761 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1820
Query: 388 STSQYTPKT 362
S + Y+P T
Sbjct: 1821 SPT-YSPTT 1828
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1796 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1855
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1856 SPT-YSP 1861
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPS-YSP 1666
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1782 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1837
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 1838 YSPTS-PVYTP 1847
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1845 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1904
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1905 SPDDSDE 1911
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1577 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1629
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1630 SPTSPN-YSP 1638
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1562 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1618 TSPS-YSP 1624
[57][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2C
Length = 1888
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/76 (61%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736
Query: 388 STSQYTPKTNDNKDDP 341
S S N + P
Sbjct: 1737 SPSYSPTSPNYSPSSP 1752
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1695 SPS-YSP 1700
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1716 SPS-YSP 1721
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1674 SPS-YSP 1679
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/70 (67%), Positives = 56/70 (80%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST----GYSPSQPGY 398
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ Y+P+ P Y
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSY 1764
Query: 397 SPSSTSQYTP 368
SPSS +YTP
Sbjct: 1765 SPSS-PEYTP 1773
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1667 SPS-YSP 1672
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1792 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1851
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1852 SPKGSTYSP 1860
Score = 90.9 bits (224), Expect = 6e-17
Identities = 46/70 (65%), Positives = 56/70 (80%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN---SGTSPDYSPSSPQFSP-STGYSPSQPGY 398
YSPTSPSYSPTSPSYSP+SP YSPSSP + + TSP YSPSSP+++P S YSP+ P Y
Sbjct: 1726 YSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKY 1785
Query: 397 SPSSTSQYTP 368
SP+S +Y+P
Sbjct: 1786 SPTS-PKYSP 1794
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1778 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1837
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1838 S-PKYSP 1843
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T YSP+ P YSP+
Sbjct: 1757 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1816
Query: 388 STSQYTP 368
S YTP
Sbjct: 1817 S-PVYTP 1822
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1806 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1865
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1866 SPTSPTYSLTSPAISPDD 1883
Score = 88.6 bits (218), Expect = 3e-16
Identities = 44/70 (62%), Positives = 57/70 (81%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY---NSGTSPDYSPSSPQFSPST-GYSPSQPGY 398
YSPTSPSYSPTSPSYSP+SP+YSP+SP +S TSP Y+P+SP +SPS+ Y+P+ P Y
Sbjct: 1719 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKY 1778
Query: 397 SPSSTSQYTP 368
SP+S +Y+P
Sbjct: 1779 SPTS-PKYSP 1787
Score = 88.2 bits (217), Expect = 4e-16
Identities = 43/66 (65%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 1751 SPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1810
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1811 PT-YSP 1815
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1702 SPSYSPTSPS-YSP 1714
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1723 SPSYSPTSPS-YSP 1735
Score = 85.9 bits (211), Expect = 2e-15
Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
YSPTSP+Y SPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P Y
Sbjct: 1740 YSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 1799
Query: 397 SPSSTSQYTP 368
SP +T +Y+P
Sbjct: 1800 SP-TTPKYSP 1808
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1621 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1681 SPSYSPTSPS-YSP 1693
Score = 83.6 bits (205), Expect = 1e-14
Identities = 46/72 (63%), Positives = 53/72 (73%), Gaps = 6/72 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP---TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
YSPTSPSYSPTSPSYSP+SP P+SP S TSP YSP+SP +SP S YSP+ P Y
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYS---PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1747
Query: 397 SPSS--TSQYTP 368
SPSS + +YTP
Sbjct: 1748 SPSSPTSPKYTP 1759
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1589 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1648
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1649 YSPTSPSYSPTSPS-YSP 1665
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1820 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1879
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1880 SPDDSDE 1886
Score = 73.6 bits (179), Expect = 1e-11
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP+SP Y+PTSP YS P+SP YSP+SP S T+P YSP+SP +SP S Y+P+
Sbjct: 1764 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1823
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1824 SPKYSPTSPT-YSP 1836
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1576 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1628
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1629 SPTSPN-YSP 1637
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1561 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1616
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1617 TSPS-YSP 1623
[58][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2B
Length = 1892
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1743
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1744 SPS-YSP 1749
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1681 SPS-YSP 1686
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1702 SPS-YSP 1707
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1723 SPS-YSP 1728
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1600 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1659
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1660 SPS-YSP 1665
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729
Query: 388 STSQYTPKTNDNKDDP 341
S + + N P
Sbjct: 1730 SPNYSPSRPNYTPTSP 1745
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1750
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1751 SPS-YSP 1756
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP S Y+P+ P YSPS
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPS 1771
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1772 S-PEYTP 1777
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1593 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1653 SPS-YSP 1658
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1747 YSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1805
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1806 TTPKYSP 1812
Score = 91.7 bits (226), Expect = 4e-17
Identities = 43/69 (62%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S +SP+Y+P+SP++SP S YSP+ P YSP+
Sbjct: 1740 YTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1799
Query: 388 STSQYTPKT 362
S + Y+P T
Sbjct: 1800 SPT-YSPTT 1807
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1796 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1855
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1856 SPKGSTYSP 1864
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1782 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1841
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1842 S-PKYSP 1847
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1810 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1869
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1870 SPTSPTYSLTSPAISPDD 1887
Score = 88.6 bits (218), Expect = 3e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+ P+Y+PTSPSYSP+SP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1733 YSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1792
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1793 S-PKYSP 1798
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPS-YSP 1700
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1709 SPSYSPTSPS-YSP 1721
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1775 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1834
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1835 SPT-YSP 1840
Score = 85.5 bits (210), Expect = 3e-15
Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S YSP+ P Y+P+
Sbjct: 1768 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1827
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1828 S-PKYSP 1833
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1607 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPS-YSP 1679
Score = 80.9 bits (198), Expect = 6e-14
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP Y+PTSPSYS P+SP YSP+SP S TSP YSP+SP +SP+T YSP+
Sbjct: 1754 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1813
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S YTP
Sbjct: 1814 SPTYSPTS-PVYTP 1826
Score = 80.5 bits (197), Expect = 8e-14
Identities = 43/74 (58%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSPSYSPTSP+YS P+SP+YSP+SP S TSP Y+P+SP +SPS+ Y+P+
Sbjct: 1719 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1778
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +Y+P
Sbjct: 1779 SPKYSPTS-PKYSP 1791
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1824 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1883
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1884 SPDDSDE 1890
[59][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2A
Length = 1896
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1747
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1748 SPS-YSP 1753
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1685 SPS-YSP 1690
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1706 SPS-YSP 1711
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1726
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1727 SPS-YSP 1732
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1604 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1664 SPS-YSP 1669
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1674 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1733
Query: 388 STSQYTPKTNDNKDDP 341
S + + N P
Sbjct: 1734 SPNYSPSRPNYTPTSP 1749
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1695 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1754
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1755 SPS-YSP 1760
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP S Y+P+ P YSPS
Sbjct: 1716 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPS 1775
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1776 S-PEYTP 1781
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1597 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1657 SPS-YSP 1662
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1751 YSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1809
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1810 TTPKYSP 1816
Score = 91.7 bits (226), Expect = 4e-17
Identities = 43/69 (62%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S +SP+Y+P+SP++SP S YSP+ P YSP+
Sbjct: 1744 YTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1803
Query: 388 STSQYTPKT 362
S + Y+P T
Sbjct: 1804 SPT-YSPTT 1811
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1800 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1859
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1860 SPKGSTYSP 1868
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1786 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1845
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1846 S-PKYSP 1851
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1814 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1873
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1874 SPTSPTYSLTSPAISPDD 1891
Score = 88.6 bits (218), Expect = 3e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+ P+Y+PTSPSYSP+SP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1737 YSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1796
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1797 S-PKYSP 1802
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1632 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1691
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1692 SPSYSPTSPS-YSP 1704
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1653 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1712
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1713 SPSYSPTSPS-YSP 1725
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1779 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1838
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1839 SPT-YSP 1844
Score = 85.5 bits (210), Expect = 3e-15
Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S YSP+ P Y+P+
Sbjct: 1772 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1831
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1832 S-PKYSP 1837
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1611 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1670
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1671 SPSYSPTSPS-YSP 1683
Score = 80.9 bits (198), Expect = 6e-14
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP Y+PTSPSYS P+SP YSP+SP S TSP YSP+SP +SP+T YSP+
Sbjct: 1758 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1817
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S YTP
Sbjct: 1818 SPTYSPTS-PVYTP 1830
Score = 80.5 bits (197), Expect = 8e-14
Identities = 43/74 (58%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSPSYSPTSP+YS P+SP+YSP+SP S TSP Y+P+SP +SPS+ Y+P+
Sbjct: 1723 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1782
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +Y+P
Sbjct: 1783 SPKYSPTS-PKYSP 1795
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1828 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1887
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1888 SPDDSDE 1894
[60][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B29
Length = 1891
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1726
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1727 SPS-YSP 1732
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1604 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1664 SPS-YSP 1669
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1685 SPS-YSP 1690
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1706 SPS-YSP 1711
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1583 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1642
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1643 SPS-YSP 1648
Score = 96.7 bits (239), Expect = 1e-18
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1674 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1733
Query: 388 STS------QYTPKTNDNKDDP 341
S S YTP + + P
Sbjct: 1734 SPSYSPTSPNYTPMSPNYSPTP 1755
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1576 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1635
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1636 SPS-YSP 1641
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1795 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1854
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1855 SPKGSTYSP 1863
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1781 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1840
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1841 S-PKYSP 1846
Score = 89.4 bits (220), Expect = 2e-16
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP----------STGYS 416
YSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P S Y+
Sbjct: 1702 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYT 1761
Query: 415 PSQPGYSPSSTSQYTP 368
P+ P YSPSS +YTP
Sbjct: 1762 PTSPSYSPSS-PEYTP 1776
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T YSP+ P YSP+
Sbjct: 1760 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1819
Query: 388 STSQYTP 368
S YTP
Sbjct: 1820 S-PVYTP 1825
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1809 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1868
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1869 SPTSPTYSLTSPAISPDD 1886
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+PTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 1754 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1813
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1814 PT-YSP 1818
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1611 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1670
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1671 SPSYSPTSPS-YSP 1683
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1632 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1691
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1692 SPSYSPTSPS-YSP 1704
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1653 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1712
Query: 409 QPGYSPSSTSQYTP 368
P YSPS + YTP
Sbjct: 1713 SPNYSPSRPN-YTP 1725
Score = 85.9 bits (211), Expect = 2e-15
Identities = 43/69 (62%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
YSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++P S YSP+ P YS
Sbjct: 1730 YSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 1789
Query: 394 PSSTSQYTP 368
P+S +Y+P
Sbjct: 1790 PTS-PKYSP 1797
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1590 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1649
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1650 SPSYSPTSPS-YSP 1662
Score = 82.8 bits (203), Expect = 2e-14
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPT--SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
Y+P SP+YSPT SP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YS
Sbjct: 1744 YTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYS 1803
Query: 394 PSSTSQYTP 368
P +T +Y+P
Sbjct: 1804 P-TTPKYSP 1811
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1558 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1617
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1618 YSPTSPSYSPTSPS-YSP 1634
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1823 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1882
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1883 SPDDSDE 1889
Score = 73.6 bits (179), Expect = 1e-11
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP+SP Y+PTSP YS P+SP YSP+SP S T+P YSP+SP +SP S Y+P+
Sbjct: 1767 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1826
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1827 SPKYSPTSPT-YSP 1839
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1545 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1597
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1598 SPTSPN-YSP 1606
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1530 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1585
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1586 TSPS-YSP 1592
[61][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B28
Length = 1908
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1743
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1744 SPS-YSP 1749
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1681 SPS-YSP 1686
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1702 SPS-YSP 1707
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1723 SPS-YSP 1728
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1600 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1659
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1660 SPS-YSP 1665
Score = 96.7 bits (239), Expect = 1e-18
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1750
Query: 388 STS------QYTPKTNDNKDDP 341
S S YTP + + P
Sbjct: 1751 SPSYSPTSPNYTPMSPNYSPTP 1772
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1593 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1653 SPS-YSP 1658
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1812 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1871
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1872 SPKGSTYSP 1880
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1798 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1857
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1858 S-PKYSP 1863
Score = 89.4 bits (220), Expect = 2e-16
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP----------STGYS 416
YSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P S Y+
Sbjct: 1719 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYT 1778
Query: 415 PSQPGYSPSSTSQYTP 368
P+ P YSPSS +YTP
Sbjct: 1779 PTSPSYSPSS-PEYTP 1793
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T YSP+ P YSP+
Sbjct: 1777 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1836
Query: 388 STSQYTP 368
S YTP
Sbjct: 1837 S-PVYTP 1842
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1826 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1885
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1886 SPTSPTYSLTSPAISPDD 1903
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+PTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 1771 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1830
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1831 PT-YSP 1835
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPS-YSP 1700
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1709 SPSYSPTSPS-YSP 1721
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729
Query: 409 QPGYSPSSTSQYTP 368
P YSPS + YTP
Sbjct: 1730 SPNYSPSRPN-YTP 1742
Score = 85.9 bits (211), Expect = 2e-15
Identities = 43/69 (62%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
YSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++P S YSP+ P YS
Sbjct: 1747 YSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 1806
Query: 394 PSSTSQYTP 368
P+S +Y+P
Sbjct: 1807 PTS-PKYSP 1814
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1607 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPS-YSP 1679
Score = 82.8 bits (203), Expect = 2e-14
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPT--SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
Y+P SP+YSPT SP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YS
Sbjct: 1761 YTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYS 1820
Query: 394 PSSTSQYTP 368
P +T +Y+P
Sbjct: 1821 P-TTPKYSP 1828
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1575 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1634
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1635 YSPTSPSYSPTSPS-YSP 1651
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1840 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1899
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1900 SPDDSDE 1906
Score = 73.6 bits (179), Expect = 1e-11
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP+SP Y+PTSP YS P+SP YSP+SP S T+P YSP+SP +SP S Y+P+
Sbjct: 1784 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1843
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1844 SPKYSPTSPT-YSP 1856
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1562 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1614
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1615 SPTSPN-YSP 1623
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1547 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1602
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1603 TSPS-YSP 1609
[62][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 18 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B27
Length = 1831
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1617 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1676
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1677 SPS-YSP 1682
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1554 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1613
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1614 SPS-YSP 1619
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1575 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1634
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1635 SPS-YSP 1640
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1596 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1655
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1656 SPS-YSP 1661
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1533 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1592
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1593 SPS-YSP 1598
Score = 96.7 bits (239), Expect = 1e-18
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1624 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1683
Query: 388 STS------QYTPKTNDNKDDP 341
S S YTP + + P
Sbjct: 1684 SPSYSPTSPNYTPMSPNYSPTP 1705
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1526 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1585
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1586 SPS-YSP 1591
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1735 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1794
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1795 SPKGSTYSP 1803
Score = 90.5 bits (223), Expect = 8e-17
Identities = 39/66 (59%), Positives = 54/66 (81%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP+YSP+ P+Y+P+SP+YSP+SP S TSP+Y+P SP +SP+ YSPS P Y+P+S
Sbjct: 1659 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSSPEYTPTS 1718
Query: 385 TSQYTP 368
+Y+P
Sbjct: 1719 -PKYSP 1723
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1721 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1780
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1781 S-PKYSP 1786
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1749 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1808
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1809 SPTSPTYSLTSPAISPDD 1826
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1561 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1620
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1621 SPSYSPTSPS-YSP 1633
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1582 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1641
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1642 SPSYSPTSPS-YSP 1654
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1714 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1773
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1774 SPT-YSP 1779
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1603 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1662
Query: 409 QPGYSPSSTSQYTP 368
P YSPS + YTP
Sbjct: 1663 SPNYSPSRPN-YTP 1675
Score = 85.9 bits (211), Expect = 2e-15
Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP+Y+P SP YSP+ Y S +SP+Y+P+SP++SP S YSP+ P YSP+
Sbjct: 1680 YSPTSPSYSPTSPNYTPMSPNYSPTPSY-SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1738
Query: 388 STSQYTPKT 362
S + Y+P T
Sbjct: 1739 SPT-YSPTT 1746
Score = 85.5 bits (210), Expect = 3e-15
Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S YSP+ P Y+P+
Sbjct: 1707 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1766
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1767 S-PKYSP 1772
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1540 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1599
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1600 SPSYSPTSPS-YSP 1612
Score = 84.3 bits (207), Expect = 6e-15
Identities = 43/67 (64%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPT PSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T YSP+ P YSP+
Sbjct: 1701 YSPT-PSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1759
Query: 388 STSQYTP 368
S YTP
Sbjct: 1760 S-PVYTP 1765
Score = 83.6 bits (205), Expect = 1e-14
Identities = 44/76 (57%), Positives = 50/76 (65%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY--- 398
YSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP S Y+P P Y
Sbjct: 1645 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1704
Query: 397 ------SPSSTSQYTP 368
SP +YTP
Sbjct: 1705 PSYSPSSP----EYTP 1716
Score = 81.3 bits (199), Expect = 5e-14
Identities = 40/73 (54%), Positives = 54/73 (73%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGTSPDYSPSSPQFSP-STGYSPSQ 407
YSP+ P+Y+PTSPSYSP+SP+YSP+SP N +P YSPSSP+++P S YSP+
Sbjct: 1666 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSSPEYTPTSPKYSPTS 1725
Query: 406 PGYSPSSTSQYTP 368
P YSP+S +Y+P
Sbjct: 1726 PKYSPTS-PKYSP 1737
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1508 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1567
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1568 YSPTSPSYSPTSPS-YSP 1584
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1763 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1822
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1823 SPDDSDE 1829
[63][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 17 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B26
Length = 1684
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1653
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1654 SPS-YSP 1659
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1531 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1590
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1591 SPS-YSP 1596
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1612 SPS-YSP 1617
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1633 SPS-YSP 1638
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1510 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1569
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1570 SPS-YSP 1575
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639
Query: 388 STSQYTPKTNDNKDDP 341
S + + N P
Sbjct: 1640 SPNYSPSRPNYTPTSP 1655
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1660
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1661 SPS-YSP 1666
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P S YSP+ P YSP+
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1668 SPN-YTP 1673
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1503 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1562
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1563 SPS-YSP 1568
Score = 90.9 bits (224), Expect = 6e-17
Identities = 42/61 (68%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP S Y+P P YSP+
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1681
Query: 388 S 386
S
Sbjct: 1682 S 1682
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1538 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1598 SPSYSPTSPS-YSP 1610
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1559 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1619 SPSYSPTSPS-YSP 1631
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1517 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1576
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1577 SPSYSPTSPS-YSP 1589
Score = 78.6 bits (192), Expect = 3e-13
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 9/72 (12%)
Frame = -3
Query: 556 TSPSYS--------PTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
TSP+Y P SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S YSP+ P
Sbjct: 1491 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1550
Query: 403 GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1551 SYSPTSPS-YSP 1561
Score = 65.5 bits (158), Expect = 3e-09
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 443
YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP
Sbjct: 1643 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1683
Score = 59.7 bits (143), Expect = 1e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 461
Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+
Sbjct: 1650 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1684
[64][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 16 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B25
Length = 1752
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1653
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1654 SPS-YSP 1659
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1531 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1590
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1591 SPS-YSP 1596
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1612 SPS-YSP 1617
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1633 SPS-YSP 1638
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1510 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1569
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1570 SPS-YSP 1575
Score = 96.7 bits (239), Expect = 1e-18
Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1660
Query: 388 STSQYTPKTNDNKDDPGT 335
S S Y+P + + P +
Sbjct: 1661 SPS-YSPTSPNYTYSPSS 1677
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1503 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1562
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1563 SPS-YSP 1568
Score = 93.6 bits (231), Expect = 9e-18
Identities = 45/70 (64%), Positives = 55/70 (78%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST---GYSPSQPGYS 395
YSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP++ YSPS P YS
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYS 1681
Query: 394 PSSTS-QYTP 368
P+S + +Y+P
Sbjct: 1682 PTSPNPKYSP 1691
Score = 91.7 bits (226), Expect = 4e-17
Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY--S 395
YSPTSPSYSPTSPSYSP+SP+YSP+SP S + P+Y+P+SP +SP S YSP+ P Y S
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYS 1674
Query: 394 PSSTSQYTPKTNDNKDDP 341
PSS S Y+P + + K P
Sbjct: 1675 PSSPS-YSPTSPNPKYSP 1691
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1538 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1598 SPSYSPTSPS-YSP 1610
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1559 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1619 SPSYSPTSPS-YSP 1631
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639
Query: 409 QPGYSPSSTSQYTP 368
P YSPS + YTP
Sbjct: 1640 SPNYSPSRPN-YTP 1652
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1517 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1576
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1577 SPSYSPTSPS-YSP 1589
Score = 82.0 bits (201), Expect = 3e-14
Identities = 48/75 (64%), Positives = 56/75 (74%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPD--YSPSSPQ--FSP-STGYSPSQ 407
Y+PTSPSYSPTSPSYSP+SP TYSPSSP S TSP+ YSP+SP +SP S YSP+
Sbjct: 1650 YTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTSPKYSPTS 1709
Query: 406 PGYSPSST--SQYTP 368
P YSP+S S Y+P
Sbjct: 1710 PTYSPTSPKGSTYSP 1724
Score = 79.3 bits (194), Expect = 2e-13
Identities = 44/78 (56%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS--YSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGY 398
YSP+SPSYSPTSP+ YSP+SP TYSP+SP S TSP YSP+SP+ S YSP+ PGY
Sbjct: 1673 YSPSSPSYSPTSPNPKYSPTSPNPTYSPTSPKYSPTSPTYSPTSPKGST---YSPTSPGY 1729
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1730 SPTSPTYSLTSPAISPDD 1747
Score = 78.6 bits (192), Expect = 3e-13
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 9/72 (12%)
Frame = -3
Query: 556 TSPSYS--------PTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
TSP+Y P SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S YSP+ P
Sbjct: 1491 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1550
Query: 403 GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1551 SYSPTSPS-YSP 1561
Score = 77.8 bits (190), Expect = 5e-13
Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP--YNSGTSPDYSPSSPQ-----FSPSTGYSPSQ 407
YSP+ P+Y+PTSPSYSP+SP+YSP+SP S +SP YSP+SP SP+ YSP+
Sbjct: 1643 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTS 1702
Query: 406 PGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1703 PKYSPTSPT-YSP 1714
Score = 68.9 bits (167), Expect = 2e-10
Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Frame = -3
Query: 565 YSPTSPS--YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
YSPTSP+ YSPTSP YSP+SPTYSP+SP S YSP+SP +SP S YS + P S
Sbjct: 1689 YSPTSPNPTYSPTSPKYSPTSPTYSPTSPKGS----TYSPTSPGYSPTSPTYSLTSPAIS 1744
Query: 394 PSSTSQ 377
P + +
Sbjct: 1745 PDDSDE 1750
[65][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B24
Length = 1924
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1700 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1759
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1760 SPS-YSP 1765
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1637 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1696
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1697 SPS-YSP 1702
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1658 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1717
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1718 SPS-YSP 1723
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1679 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1738
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1739 SPS-YSP 1744
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1616 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1675
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1676 SPS-YSP 1681
Score = 96.7 bits (239), Expect = 1e-18
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1707 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1766
Query: 388 STS------QYTPKTNDNKDDP 341
S S YTP + + P
Sbjct: 1767 SPSYSPTSPNYTPMSPNYSPTP 1788
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1609 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1668
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1669 SPS-YSP 1674
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1828 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1887
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1888 SPKGSTYSP 1896
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1814 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1873
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1874 S-PKYSP 1879
Score = 89.4 bits (220), Expect = 2e-16
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP----------STGYS 416
YSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P S Y+
Sbjct: 1735 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYT 1794
Query: 415 PSQPGYSPSSTSQYTP 368
P+ P YSPSS +YTP
Sbjct: 1795 PTSPSYSPSS-PEYTP 1809
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T YSP+ P YSP+
Sbjct: 1793 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1852
Query: 388 STSQYTP 368
S YTP
Sbjct: 1853 S-PVYTP 1858
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1842 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1901
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1902 SPTSPTYSLTSPAISPDD 1919
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+PTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 1787 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1846
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1847 PT-YSP 1851
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1644 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1703
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1704 SPSYSPTSPS-YSP 1716
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1665 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1724
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1725 SPSYSPTSPS-YSP 1737
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1686 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1745
Query: 409 QPGYSPSSTSQYTP 368
P YSPS + YTP
Sbjct: 1746 SPNYSPSRPN-YTP 1758
Score = 85.9 bits (211), Expect = 2e-15
Identities = 43/69 (62%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
YSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++P S YSP+ P YS
Sbjct: 1763 YSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 1822
Query: 394 PSSTSQYTP 368
P+S +Y+P
Sbjct: 1823 PTS-PKYSP 1830
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1623 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1682
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1683 SPSYSPTSPS-YSP 1695
Score = 82.8 bits (203), Expect = 2e-14
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPT--SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
Y+P SP+YSPT SP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YS
Sbjct: 1777 YTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYS 1836
Query: 394 PSSTSQYTP 368
P +T +Y+P
Sbjct: 1837 P-TTPKYSP 1844
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1591 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1650
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1651 YSPTSPSYSPTSPS-YSP 1667
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1856 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1915
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1916 SPDDSDE 1922
Score = 73.6 bits (179), Expect = 1e-11
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP+SP Y+PTSP YS P+SP YSP+SP S T+P YSP+SP +SP S Y+P+
Sbjct: 1800 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1859
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1860 SPKYSPTSPT-YSP 1872
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1578 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1630
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1631 SPTSPN-YSP 1639
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1563 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1618
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1619 TSPS-YSP 1625
[66][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 14 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B23
Length = 1653
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1622
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1623 SPS-YSP 1628
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1500 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1559
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1560 SPS-YSP 1565
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1521 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1580
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1581 SPS-YSP 1586
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1542 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1602 SPS-YSP 1607
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1479 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1538
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1539 SPS-YSP 1544
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1549 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608
Query: 388 STSQYTPKTNDNKDDP 341
S + + N P
Sbjct: 1609 SPNYSPSRPNYTPTSP 1624
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1629
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1630 SPS-YSP 1635
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P S YSP+ P YSP+
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1636
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1637 SPN-YTP 1642
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1472 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1531
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1532 SPS-YSP 1537
Score = 90.9 bits (224), Expect = 6e-17
Identities = 42/61 (68%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP S Y+P P YSP+
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1650
Query: 388 S 386
S
Sbjct: 1651 S 1651
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1507 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1566
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1567 SPSYSPTSPS-YSP 1579
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1528 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1587
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1588 SPSYSPTSPS-YSP 1600
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1486 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1545
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1546 SPSYSPTSPS-YSP 1558
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1513
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1514 YSPTSPSYSPTSPS-YSP 1530
Score = 65.5 bits (158), Expect = 3e-09
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 443
YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP
Sbjct: 1612 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1652
Score = 59.7 bits (143), Expect = 1e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 461
Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+
Sbjct: 1619 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1653
[67][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 13 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B22
Length = 1722
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/76 (61%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1542 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 388 STSQYTPKTNDNKDDP 341
S S N + P
Sbjct: 1602 SPSYSPTSPNYSPSSP 1617
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1500 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1559
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1560 SPS-YSP 1565
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1521 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1580
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1581 SPS-YSP 1586
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1479 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1538
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1539 SPS-YSP 1544
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/69 (68%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ YSP+ P YSP+
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPT 1629
Query: 388 STSQYTPKT 362
S + Y+P T
Sbjct: 1630 SPT-YSPTT 1637
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPSSP++SP S YSP+ P YSP
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSP- 1635
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1636 TTPKYSP 1642
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1472 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1531
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1532 SPS-YSP 1537
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP+YSPSSP YSP+SP S TSP YSP++P++SP S YSP+ P Y+P+
Sbjct: 1598 YSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1657
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1658 S-PKYSP 1663
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1626 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1685
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1686 SPKGSTYSP 1694
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1640 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1699
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1700 SPTSPTYSLTSPAISPDD 1717
Score = 88.2 bits (217), Expect = 4e-16
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+YSP++P YSP+SP S TSP Y+P+SP++SP S YSP+ P YSP+
Sbjct: 1619 YSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPT 1678
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1679 SPT-YSP 1684
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1507 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1566
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1567 SPSYSPTSPS-YSP 1579
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1528 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1587
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1588 SPSYSPTSPS-YSP 1600
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYSP+SP +YSP+SP S TSP YSP+SP +SP S YSPS
Sbjct: 1556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1615
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +Y+P
Sbjct: 1616 SPKYSPTS-PKYSP 1628
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1486 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1545
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1546 SPSYSPTSPS-YSP 1558
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/74 (64%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSPSYSPTSPSYS P+SP YSPSSP S TSP YSP+SP +SP+T YSP+
Sbjct: 1584 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1643
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S YTP
Sbjct: 1644 SPTYSPTS-PVYTP 1656
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1513
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1514 YSPTSPSYSPTSPS-YSP 1530
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1654 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1713
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1714 SPDDSDE 1720
[68][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B21
Length = 1922
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1757
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1758 SPS-YSP 1763
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1695 SPS-YSP 1700
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1716 SPS-YSP 1721
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1737 SPS-YSP 1742
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1674 SPS-YSP 1679
Score = 96.7 bits (239), Expect = 1e-18
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1764
Query: 388 STS------QYTPKTNDNKDDP 341
S S YTP + + P
Sbjct: 1765 SPSYSPTSPNYTPMSPNYSPTP 1786
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1667 SPS-YSP 1672
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1826 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1885
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1886 SPKGSTYSP 1894
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1812 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1871
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1872 S-PKYSP 1877
Score = 89.4 bits (220), Expect = 2e-16
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP----------STGYS 416
YSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P S Y+
Sbjct: 1733 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYT 1792
Query: 415 PSQPGYSPSSTSQYTP 368
P+ P YSPSS +YTP
Sbjct: 1793 PTSPSYSPSS-PEYTP 1807
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T YSP+ P YSP+
Sbjct: 1791 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1850
Query: 388 STSQYTP 368
S YTP
Sbjct: 1851 S-PVYTP 1856
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1840 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1899
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1900 SPTSPTYSLTSPAISPDD 1917
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+PTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 1785 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1844
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1845 PT-YSP 1849
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1702 SPSYSPTSPS-YSP 1714
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1723 SPSYSPTSPS-YSP 1735
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1743
Query: 409 QPGYSPSSTSQYTP 368
P YSPS + YTP
Sbjct: 1744 SPNYSPSRPN-YTP 1756
Score = 85.9 bits (211), Expect = 2e-15
Identities = 43/69 (62%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
YSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++P S YSP+ P YS
Sbjct: 1761 YSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 1820
Query: 394 PSSTSQYTP 368
P+S +Y+P
Sbjct: 1821 PTS-PKYSP 1828
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1621 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1681 SPSYSPTSPS-YSP 1693
Score = 82.8 bits (203), Expect = 2e-14
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPT--SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
Y+P SP+YSPT SP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YS
Sbjct: 1775 YTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYS 1834
Query: 394 PSSTSQYTP 368
P +T +Y+P
Sbjct: 1835 P-TTPKYSP 1842
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1589 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1648
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1649 YSPTSPSYSPTSPS-YSP 1665
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1854 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1913
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1914 SPDDSDE 1920
Score = 73.6 bits (179), Expect = 1e-11
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP+SP Y+PTSP YS P+SP YSP+SP S T+P YSP+SP +SP S Y+P+
Sbjct: 1798 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1857
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1858 SPKYSPTSPT-YSP 1870
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1576 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1628
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1629 SPTSPN-YSP 1637
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1561 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1616
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1617 TSPS-YSP 1623
[69][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B20
Length = 1923
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1758
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1759 SPS-YSP 1764
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 96.7 bits (239), Expect = 1e-18
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1765
Query: 388 STS------QYTPKTNDNKDDP 341
S S YTP + + P
Sbjct: 1766 SPSYSPTSPNYTPMSPNYSPTP 1787
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1827 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1886
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1887 SPKGSTYSP 1895
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1813 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1872
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1873 S-PKYSP 1878
Score = 89.4 bits (220), Expect = 2e-16
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP----------STGYS 416
YSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P S Y+
Sbjct: 1734 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYT 1793
Query: 415 PSQPGYSPSSTSQYTP 368
P+ P YSPSS +YTP
Sbjct: 1794 PTSPSYSPSS-PEYTP 1808
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T YSP+ P YSP+
Sbjct: 1792 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1851
Query: 388 STSQYTP 368
S YTP
Sbjct: 1852 S-PVYTP 1857
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1841 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1900
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1901 SPTSPTYSLTSPAISPDD 1918
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+PTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 1786 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1845
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1846 PT-YSP 1850
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPS-YSP 1736
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 409 QPGYSPSSTSQYTP 368
P YSPS + YTP
Sbjct: 1745 SPNYSPSRPN-YTP 1757
Score = 85.9 bits (211), Expect = 2e-15
Identities = 43/69 (62%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
YSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++P S YSP+ P YS
Sbjct: 1762 YSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 1821
Query: 394 PSSTSQYTP 368
P+S +Y+P
Sbjct: 1822 PTS-PKYSP 1829
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 82.8 bits (203), Expect = 2e-14
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPT--SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
Y+P SP+YSPT SP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YS
Sbjct: 1776 YTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYS 1835
Query: 394 PSSTSQYTP 368
P +T +Y+P
Sbjct: 1836 P-TTPKYSP 1843
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPS-YSP 1666
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1855 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1914
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1915 SPDDSDE 1921
Score = 73.6 bits (179), Expect = 1e-11
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP+SP Y+PTSP YS P+SP YSP+SP S T+P YSP+SP +SP S Y+P+
Sbjct: 1799 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1858
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1859 SPKYSPTSPT-YSP 1871
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1577 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1629
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1630 SPTSPN-YSP 1638
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1562 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1618 TSPS-YSP 1624
[70][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 10 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1F
Length = 1840
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1632 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1691
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1692 SPS-YSP 1697
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1569 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1628
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1629 SPS-YSP 1634
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1590 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1649
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1650 SPS-YSP 1655
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1611 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1670
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1671 SPS-YSP 1676
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1548 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1607
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1608 SPS-YSP 1613
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1618 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1677
Query: 388 STSQYTPKTNDNKDDP 341
S + + N P
Sbjct: 1678 SPNYSPSRPNYTPTSP 1693
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1639 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1698
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1699 SPS-YSP 1704
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP S Y+P+ P YSPS
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPS 1719
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1720 S-PEYTP 1725
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1541 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1600
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1601 SPS-YSP 1606
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1695 YSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1753
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1754 TTPKYSP 1760
Score = 91.7 bits (226), Expect = 4e-17
Identities = 43/69 (62%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S +SP+Y+P+SP++SP S YSP+ P YSP+
Sbjct: 1688 YTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1747
Query: 388 STSQYTPKT 362
S + Y+P T
Sbjct: 1748 SPT-YSPTT 1755
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1744 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1803
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1804 SPKGSTYSP 1812
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1730 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1789
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1790 S-PKYSP 1795
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1758 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1817
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1818 SPTSPTYSLTSPAISPDD 1835
Score = 88.6 bits (218), Expect = 3e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+ P+Y+PTSPSYSP+SP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1681 YSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1740
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1741 S-PKYSP 1746
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1576 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1635
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1636 SPSYSPTSPS-YSP 1648
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1597 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1657 SPSYSPTSPS-YSP 1669
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1723 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1782
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1783 SPT-YSP 1788
Score = 85.5 bits (210), Expect = 3e-15
Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S YSP+ P Y+P+
Sbjct: 1716 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1775
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1776 S-PKYSP 1781
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1555 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1614
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1615 SPSYSPTSPS-YSP 1627
Score = 80.9 bits (198), Expect = 6e-14
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP Y+PTSPSYS P+SP YSP+SP S TSP YSP+SP +SP+T YSP+
Sbjct: 1702 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1761
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S YTP
Sbjct: 1762 SPTYSPTS-PVYTP 1774
Score = 80.5 bits (197), Expect = 8e-14
Identities = 43/74 (58%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSPSYSPTSP+YS P+SP+YSP+SP S TSP Y+P+SP +SPS+ Y+P+
Sbjct: 1667 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1726
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +Y+P
Sbjct: 1727 SPKYSPTS-PKYSP 1739
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1772 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1831
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1832 SPDDSDE 1838
Score = 62.8 bits (151), Expect = 2e-08
Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 9/73 (12%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPT--------YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 407
P+SP YSP+SP Y+P SP S TSP YSP+SP +SP S YSP+
Sbjct: 1514 PSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1573
Query: 406 PGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1574 PSYSPTSPS-YSP 1585
[71][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 9 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1E
Length = 1851
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1633 SPS-YSP 1638
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1654 SPS-YSP 1659
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1612 SPS-YSP 1617
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 388 STSQYTPKTNDNKDDP 341
S + + N P
Sbjct: 1682 SPNYSPSRPNYTPTSP 1697
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/69 (66%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1702
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1703 SPS-YSPSS 1710
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1671 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPS 1730
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1731 S-PEYTP 1736
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/67 (67%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1692 YTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1751
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1752 S-PKYSP 1757
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1545 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1605 SPS-YSP 1610
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1755 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1814
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1815 SPKGSTYSP 1823
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1713 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1772
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1773 SPT-YSP 1778
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1741 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1800
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1801 S-PKYSP 1806
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1769 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1828
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1829 SPTSPTYSLTSPAISPDD 1846
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1640 SPSYSPTSPS-YSP 1652
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1661 SPSYSPTSPS-YSP 1673
Score = 86.3 bits (212), Expect = 1e-15
Identities = 45/73 (61%), Positives = 55/73 (75%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP---GY 398
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P S YSP+ P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPS 1709
Query: 397 SPS---STSQYTP 368
SPS ++ +YTP
Sbjct: 1710 SPSYSPTSPKYTP 1722
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1734 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1793
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1794 SPT-YSP 1799
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1559 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1619 SPSYSPTSPS-YSP 1631
Score = 82.4 bits (202), Expect = 2e-14
Identities = 45/74 (60%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSP+SPSYSP+SP +YSPSSP + TSP YSP+SP++SP S YSP+
Sbjct: 1699 YSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1758
Query: 409 QPGYSPSSTSQYTP 368
P YSP +T +Y+P
Sbjct: 1759 SPTYSP-TTPKYSP 1771
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1527 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1586
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1587 YSPTSPSYSPTSPS-YSP 1603
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1720 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1775
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 1776 YSPTS-PVYTP 1785
Score = 77.0 bits (188), Expect = 9e-13
Identities = 45/88 (51%), Positives = 55/88 (62%), Gaps = 22/88 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP---------------------SSPYNSGTSPDYSPS 449
YSPTSPSYSPTSPSYSP+SP YSP SSP S TSP Y+P+
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPT 1723
Query: 448 SPQFSPST-GYSPSQPGYSPSSTSQYTP 368
SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1724 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1750
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1783 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1842
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1843 SPDDSDE 1849
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1514 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1566
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1567 SPTSPN-YSP 1575
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1499 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1554
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1555 TSPS-YSP 1561
[72][TOP]
>UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=2 Tax=Canis lupus familiaris
RepID=UPI00005A0B1D
Length = 1764
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1674 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1733
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1734 SPS-YSP 1739
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1611 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1670
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1671 SPS-YSP 1676
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1632 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1691
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1692 SPS-YSP 1697
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1653 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1712
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1713 SPS-YSP 1718
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1590 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1649
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1650 SPS-YSP 1655
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1719
Query: 388 STSQYTPKTNDNKDDP 341
S + + N P
Sbjct: 1720 SPNYSPSRPNYTPTSP 1735
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1681 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1740
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1741 SPS-YSP 1746
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P S YSP+ P YSP+
Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1747
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1748 SPN-YTP 1753
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1583 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1642
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1643 SPS-YSP 1648
Score = 90.9 bits (224), Expect = 6e-17
Identities = 42/61 (68%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP S Y+P P YSP+
Sbjct: 1702 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1761
Query: 388 S 386
S
Sbjct: 1762 S 1762
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1618 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1677
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1678 SPSYSPTSPS-YSP 1690
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1639 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1698
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1699 SPSYSPTSPS-YSP 1711
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1597 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1657 SPSYSPTSPS-YSP 1669
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1565 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1624
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1625 YSPTSPSYSPTSPS-YSP 1641
Score = 65.5 bits (158), Expect = 3e-09
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 443
YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP
Sbjct: 1723 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1763
Score = 59.7 bits (143), Expect = 1e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 461
Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+
Sbjct: 1730 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1764
[73][TOP]
>UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 8 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1C
Length = 1719
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1688
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1689 SPS-YSP 1694
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1626 SPS-YSP 1631
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1647 SPS-YSP 1652
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1545 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1605 SPS-YSP 1610
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTPKTNDNKDDP 341
S + + N P
Sbjct: 1675 SPNYSPSRPNYTPTSP 1690
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P S YSP+ P YSP+
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1702
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1703 SPN-YTP 1708
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1538 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1598 SPS-YSP 1603
Score = 90.9 bits (224), Expect = 6e-17
Identities = 42/61 (68%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP S Y+P P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1716
Query: 388 S 386
S
Sbjct: 1717 S 1717
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPS-YSP 1645
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1654 SPSYSPTSPS-YSP 1666
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1552 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1612 SPSYSPTSPS-YSP 1624
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1520 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1579
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1580 YSPTSPSYSPTSPS-YSP 1596
Score = 65.5 bits (158), Expect = 3e-09
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 443
YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP
Sbjct: 1678 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1718
Score = 59.7 bits (143), Expect = 1e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 461
Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+
Sbjct: 1685 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1719
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1507 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1559
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1560 SPTSPN-YSP 1568
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1492 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1547
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1548 TSPS-YSP 1554
[74][TOP]
>UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 7 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1B
Length = 1858
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1688
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1689 SPS-YSP 1694
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1626 SPS-YSP 1631
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1647 SPS-YSP 1652
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1545 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1605 SPS-YSP 1610
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTPKTNDNKDDP 341
S + + N P
Sbjct: 1675 SPNYSPSRPNYTPTSP 1690
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P S YSP+ P YSP+
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1702
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1703 SPN-YTP 1708
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1538 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1598 SPS-YSP 1603
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP S Y+P P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1713 YSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1771
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1772 TTPKYSP 1778
Score = 91.3 bits (225), Expect = 5e-17
Identities = 43/67 (64%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP YSP+SP+++P S YSPS P Y+P+
Sbjct: 1685 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1744
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1745 S-PKYSP 1750
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1762 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1821
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1822 SPKGSTYSP 1830
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1748 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1807
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1808 S-PKYSP 1813
Score = 89.4 bits (220), Expect = 2e-16
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSP+Y+P SP YSP+SP S TSP Y+P+SP +SPS+ Y+P+ P YSP+
Sbjct: 1692 YSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPT 1751
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1752 S-PKYSP 1757
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1776 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1835
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1836 SPTSPTYSLTSPAISPDD 1853
Score = 88.6 bits (218), Expect = 3e-16
Identities = 41/67 (61%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP S Y+P+ P YSPS
Sbjct: 1678 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPS 1737
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1738 S-PEYTP 1743
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPS-YSP 1645
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1654 SPSYSPTSPS-YSP 1666
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1741 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1800
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1801 SPT-YSP 1806
Score = 85.5 bits (210), Expect = 3e-15
Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S YSP+ P Y+P+
Sbjct: 1734 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1793
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1794 S-PKYSP 1799
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1552 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1612 SPSYSPTSPS-YSP 1624
Score = 80.9 bits (198), Expect = 6e-14
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP Y+PTSPSYS P+SP YSP+SP S TSP YSP+SP +SP+T YSP+
Sbjct: 1720 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1779
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S YTP
Sbjct: 1780 SPTYSPTS-PVYTP 1792
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1520 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1579
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1580 YSPTSPSYSPTSPS-YSP 1596
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1790 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1849
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1850 SPDDSDE 1856
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1507 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1559
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1560 SPTSPN-YSP 1568
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1492 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1547
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1548 TSPS-YSP 1554
[75][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1A
Length = 1767
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1736
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1737 SPS-YSP 1742
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1674 SPS-YSP 1679
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1695 SPS-YSP 1700
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1716 SPS-YSP 1721
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1593 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1653 SPS-YSP 1658
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722
Query: 388 STSQYTPKTNDNKDDP 341
S + + N P
Sbjct: 1723 SPNYSPSRPNYTPTSP 1738
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1743
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1744 SPS-YSP 1749
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P S YSP+ P YSP+
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1750
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1751 SPN-YTP 1756
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1586 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1645
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1646 SPS-YSP 1651
Score = 90.9 bits (224), Expect = 6e-17
Identities = 42/61 (68%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP S Y+P P YSP+
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1764
Query: 388 S 386
S
Sbjct: 1765 S 1765
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1681 SPSYSPTSPS-YSP 1693
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1702 SPSYSPTSPS-YSP 1714
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1600 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1659
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1660 SPSYSPTSPS-YSP 1672
Score = 67.0 bits (162), Expect = 9e-10
Identities = 38/74 (51%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPT--------YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
SP S SPSYSP+SP Y+P SP S TSP YSP+SP +SP S YSP+
Sbjct: 1558 SPGELSCGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1617
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1618 SPSYSPTSPS-YSP 1630
Score = 65.5 bits (158), Expect = 3e-09
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 443
YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP
Sbjct: 1726 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1766
Score = 59.7 bits (143), Expect = 1e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 461
Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+
Sbjct: 1733 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1767
[76][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B19
Length = 1693
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1603 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1662
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1663 SPS-YSP 1668
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1540 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1599
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1600 SPS-YSP 1605
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1561 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1620
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1621 SPS-YSP 1626
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1582 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1641
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1642 SPS-YSP 1647
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1519 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1578
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1579 SPS-YSP 1584
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1589 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1648
Query: 388 STSQYTPKTNDNKDDP 341
S + + N P
Sbjct: 1649 SPNYSPSRPNYTPTSP 1664
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1610 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1669
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1670 SPS-YSP 1675
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P S YSP+ P YSP+
Sbjct: 1617 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1676
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1677 SPN-YTP 1682
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1512 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1571
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1572 SPS-YSP 1577
Score = 90.9 bits (224), Expect = 6e-17
Identities = 42/61 (68%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP S Y+P P YSP+
Sbjct: 1631 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1690
Query: 388 S 386
S
Sbjct: 1691 S 1691
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1547 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1606
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1607 SPSYSPTSPS-YSP 1619
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1568 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1627
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1628 SPSYSPTSPS-YSP 1640
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1526 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1585
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1586 SPSYSPTSPS-YSP 1598
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1494 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1553
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1554 YSPTSPSYSPTSPS-YSP 1570
Score = 65.5 bits (158), Expect = 3e-09
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 443
YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP
Sbjct: 1652 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1692
Score = 59.7 bits (143), Expect = 1e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 461
Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+
Sbjct: 1659 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1693
[77][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B17
Length = 1788
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1757
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1758 SPS-YSP 1763
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1695 SPS-YSP 1700
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1716 SPS-YSP 1721
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1737 SPS-YSP 1742
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1674 SPS-YSP 1679
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1743
Query: 388 STSQYTPKTNDNKDDP 341
S + + N P
Sbjct: 1744 SPNYSPSRPNYTPTSP 1759
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1764
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1765 SPS-YSP 1770
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P S YSP+ P YSP+
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1771
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1772 SPN-YTP 1777
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1667 SPS-YSP 1672
Score = 90.9 bits (224), Expect = 6e-17
Identities = 42/61 (68%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP S Y+P P YSP+
Sbjct: 1726 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1785
Query: 388 S 386
S
Sbjct: 1786 S 1786
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1702 SPSYSPTSPS-YSP 1714
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1723 SPSYSPTSPS-YSP 1735
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1621 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1681 SPSYSPTSPS-YSP 1693
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1589 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1648
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1649 YSPTSPSYSPTSPS-YSP 1665
Score = 65.5 bits (158), Expect = 3e-09
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 443
YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP
Sbjct: 1747 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1787
Score = 59.7 bits (143), Expect = 1e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 461
Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+
Sbjct: 1754 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1788
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1576 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1628
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1629 SPTSPN-YSP 1637
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1561 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1616
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1617 TSPS-YSP 1623
[78][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B16
Length = 1922
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1757
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1758 SPS-YSP 1763
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1695 SPS-YSP 1700
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1716 SPS-YSP 1721
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1737 SPS-YSP 1742
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1674 SPS-YSP 1679
Score = 96.7 bits (239), Expect = 1e-18
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 7/82 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1764
Query: 388 STS------QYTPKTNDNKDDP 341
S S YTP + + P
Sbjct: 1765 SPSYSPTSPNYTPMSPNYSPTP 1786
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1667 SPS-YSP 1672
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1826 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1885
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1886 SPKGSTYSP 1894
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1812 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1871
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1872 S-PKYSP 1877
Score = 89.4 bits (220), Expect = 2e-16
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP----------STGYS 416
YSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P S Y+
Sbjct: 1733 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYT 1792
Query: 415 PSQPGYSPSSTSQYTP 368
P+ P YSPSS +YTP
Sbjct: 1793 PTSPSYSPSS-PEYTP 1807
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T YSP+ P YSP+
Sbjct: 1791 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1850
Query: 388 STSQYTP 368
S YTP
Sbjct: 1851 S-PVYTP 1856
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1840 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1899
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1900 SPTSPTYSLTSPAISPDD 1917
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+PTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 1785 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1844
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1845 PT-YSP 1849
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1702 SPSYSPTSPS-YSP 1714
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1723 SPSYSPTSPS-YSP 1735
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1743
Query: 409 QPGYSPSSTSQYTP 368
P YSPS + YTP
Sbjct: 1744 SPNYSPSRPN-YTP 1756
Score = 85.9 bits (211), Expect = 2e-15
Identities = 43/69 (62%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
YSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++P S YSP+ P YS
Sbjct: 1761 YSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 1820
Query: 394 PSSTSQYTP 368
P+S +Y+P
Sbjct: 1821 PTS-PKYSP 1828
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1621 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1681 SPSYSPTSPS-YSP 1693
Score = 82.8 bits (203), Expect = 2e-14
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPT--SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
Y+P SP+YSPT SP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YS
Sbjct: 1775 YTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYS 1834
Query: 394 PSSTSQYTP 368
P +T +Y+P
Sbjct: 1835 P-TTPKYSP 1842
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1589 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1648
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1649 YSPTSPSYSPTSPS-YSP 1665
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1854 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1913
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1914 SPDDSDE 1920
Score = 73.6 bits (179), Expect = 1e-11
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP+SP Y+PTSP YS P+SP YSP+SP S T+P YSP+SP +SP S Y+P+
Sbjct: 1798 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1857
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1858 SPKYSPTSPT-YSP 1870
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1576 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1628
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1629 SPTSPN-YSP 1637
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1561 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1616
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1617 TSPS-YSP 1623
[79][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis lupus
familiaris RepID=UPI0001951285
Length = 1969
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSPS+P Y+P+
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1758
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1759 SPS-YSP 1764
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 388 STSQYTPKTNDNKDDP 341
S + + N P
Sbjct: 1745 SPNYSPSRPNYTPTSP 1760
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Y+P+ P YSP+
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPT 1765
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1766 SPS-YSP 1771
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P S YSP+ P YSP+
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1772
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1773 SPN-YTP 1778
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 92.0 bits (227), Expect = 3e-17
Identities = 45/66 (68%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPSS
Sbjct: 1790 SPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS 1849
Query: 385 TSQYTP 368
+YTP
Sbjct: 1850 -PEYTP 1854
Score = 91.7 bits (226), Expect = 4e-17
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP S Y+P P YSP+
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1786
Query: 388 STSQYT 371
S + T
Sbjct: 1787 SPNSPT 1792
Score = 91.7 bits (226), Expect = 4e-17
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P SP YSP+SP NS TSP YSP+SP +SPS+ Y+PS
Sbjct: 1762 YSPTSPSYSPTSPNYTPMSPNYSPTSP-NSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1820
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 1821 SPSYSPSSPS-YSP 1833
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1873 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1932
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1933 SPKGSTYSP 1941
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1824 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1882
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1883 TTPKYSP 1889
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1831 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1890
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1891 SPT-YSP 1896
Score = 90.1 bits (222), Expect = 1e-16
Identities = 45/82 (54%), Positives = 55/82 (67%), Gaps = 14/82 (17%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------------S 428
YSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P S
Sbjct: 1734 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPNSPTS 1793
Query: 427 TGYSPSQPGYSPSSTSQYTPKT 362
YSP+ P YSPSS +YTP++
Sbjct: 1794 PSYSPTSPSYSPSS-PRYTPQS 1814
Score = 89.7 bits (221), Expect = 1e-16
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSP+SP Y+P SPTY+PSSP S +SP YSP+SP+++P S YSPS P Y+P+
Sbjct: 1796 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1855
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1856 S-PKYSP 1861
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1859 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1918
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1919 S-PKYSP 1924
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1887 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1946
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1947 SPTSPTYSLTSPAISPDD 1964
Score = 88.6 bits (218), Expect = 3e-16
Identities = 41/69 (59%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P+SPSYSP+SPSYSP+SP Y+P+SP S +SP+Y+P+SP++SP S YSP+ P YSP+
Sbjct: 1817 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1876
Query: 388 STSQYTPKT 362
S + Y+P T
Sbjct: 1877 SPT-YSPTT 1884
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPS-YSP 1736
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1852 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1911
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1912 SPT-YSP 1917
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPS-YSP 1666
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1838 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1893
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 1894 YSPTS-PVYTP 1903
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1901 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1960
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1961 SPDDSDE 1967
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1577 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1629
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1630 SPTSPN-YSP 1638
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1562 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1618 TSPS-YSP 1624
[80][TOP]
>UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7PJA3_IXOSC
Length = 1937
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1716 SPS-YSPSS 1723
Score = 97.8 bits (242), Expect = 5e-19
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P+SP S TSP YSP+SP +SP S YSP+ P YSPS
Sbjct: 1705 YSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1764
Query: 388 STSQYTPKT 362
S + Y+P++
Sbjct: 1765 SPN-YSPQS 1772
Score = 97.8 bits (242), Expect = 5e-19
Identities = 49/75 (65%), Positives = 56/75 (74%), Gaps = 7/75 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSPSSP S SP YSP SP +SPS+ YSP+ P YSP+
Sbjct: 1740 YSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPT 1799
Query: 388 STS------QYTPKT 362
S S QYTP +
Sbjct: 1800 SPSYSPGSPQYTPSS 1814
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1695 SPS-YSP 1700
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1674 SPS-YSP 1679
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ Y+P+ P YSP+
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPT 1736
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1737 SPS-YSP 1742
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP+YSP SP +SP S YSPS P YSP+
Sbjct: 1733 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPT 1792
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1793 SPS-YSP 1798
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/69 (66%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSPSSP + SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPT 1757
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1758 SPS-YSPSS 1765
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/69 (68%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP SP Y+PSSP S TSP YSP+SP +SPS+ YSP+ P YSP+
Sbjct: 1789 YSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPT 1848
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 1849 SPT-YTPSS 1856
Score = 94.0 bits (232), Expect = 7e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSPSSP YSP+SP S TSP Y+PSSP++SP S YSP+ P YSP+
Sbjct: 1817 YSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPT 1876
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1877 S-PKYSP 1882
Score = 93.6 bits (231), Expect = 9e-18
Identities = 45/70 (64%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1866 YSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSPGY 1925
Query: 397 SPSSTSQYTP 368
SPSS + Y+P
Sbjct: 1926 SPSSPT-YSP 1934
Score = 92.0 bits (227), Expect = 3e-17
Identities = 43/69 (62%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP+SP+Y+P SPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ YSP P YSP
Sbjct: 1719 YSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPG 1778
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1779 SPS-YSPSS 1786
Score = 92.0 bits (227), Expect = 3e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+Y+PSSP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1838 YSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPT 1897
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1898 S-PKYSP 1903
Score = 90.5 bits (223), Expect = 8e-17
Identities = 43/66 (65%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+P SP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1608 TPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1668 PS-YSP 1672
Score = 90.1 bits (222), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSPSYSP+SP+YSP SP + +SP YSP+SP +SP S YSPS P YSP+
Sbjct: 1782 YSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPT 1841
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1842 S-PKYSP 1847
Score = 89.4 bits (220), Expect = 2e-16
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP+Y+P+SPS +P+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1593 YSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPT 1652
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1653 SPS-YSP 1658
Score = 88.6 bits (218), Expect = 3e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SPSYSP+SP YSP+SP+YSP+SP S SP Y+PSSP++SP S YSP+ P YSPS
Sbjct: 1775 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPS 1834
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1835 S-PKYSP 1840
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1702 SPSYSPTSPS-YSP 1714
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSPS
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1722
Query: 409 QPGYSPSSTSQYTP 368
P Y+P+S S Y+P
Sbjct: 1723 SPNYTPASPS-YSP 1735
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP ++P S YSP+ P
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPT 1743
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1744 SPSYSPTSPS-YSP 1756
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1621 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1681 SPSYSPTSPS-YSP 1693
Score = 84.7 bits (208), Expect = 4e-15
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SP SP+YSP+SP+Y+PSSP+ +P+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1587 SPVSPNYSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTS 1646
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1647 PS-YSP 1651
Score = 84.0 bits (206), Expect = 7e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSP+SP YS P+SPTY+PSSP S TSP YSP+SPQ+SP S YSP+
Sbjct: 1824 YSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPT 1883
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1884 SPKYSPTSPT-YSP 1896
Score = 81.6 bits (200), Expect = 4e-14
Identities = 48/90 (53%), Positives = 56/90 (62%), Gaps = 22/90 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP---------------------SSPYNSGTSPDYSPS 449
YSPTSPSYSPTSPSYSPSSP YSP +SP S TSP YSP
Sbjct: 1747 YSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPG 1806
Query: 448 SPQFSPST-GYSPSQPGYSPSSTSQYTPKT 362
SPQ++PS+ YSP+ P YSP+S S Y+P +
Sbjct: 1807 SPQYTPSSPKYSPTSPTYSPTSPS-YSPSS 1835
Score = 80.5 bits (197), Expect = 8e-14
Identities = 41/63 (65%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSPSTGYSPSQPGYS 395
YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP GYSPS P YS
Sbjct: 1880 YSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSP------GYSPSSPTYS 1933
Query: 394 PSS 386
P+S
Sbjct: 1934 PTS 1936
Score = 77.4 bits (189), Expect = 7e-13
Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+Y+P+SP YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1845 YSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPT 1904
Query: 409 QPGYSPSST--SQYTP 368
P YSP+S S Y+P
Sbjct: 1905 SPTYSPTSPKGSSYSP 1920
Score = 60.1 bits (144), Expect = 1e-07
Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGTSPDYSPSSPQFSPST--------GYSP 413
YSP S SP S P SP SP+SPY S SP+YSPSSP ++PS+ YSP
Sbjct: 1558 YSPASAGLSP-GWSPQPGSPASSPASPYIPSPVSPNYSPSSPAYAPSSPSMTPASPTYSP 1616
Query: 412 SQPGYSPSSTSQYTP 368
+ P YSP+S S Y+P
Sbjct: 1617 TSPSYSPTSPS-YSP 1630
Score = 56.2 bits (134), Expect = 2e-06
Identities = 28/37 (75%), Positives = 30/37 (81%), Gaps = 3/37 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSP---SYSPSSPTYSPSSPYNSGTSP 464
YSPTSP+YSPTSP SYSP+SP YSPSSP S TSP
Sbjct: 1901 YSPTSPTYSPTSPKGSSYSPTSPGYSPSSPTYSPTSP 1937
[81][TOP]
>UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis
RepID=UPI000186D846
Length = 1885
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1689 SPS-YSP 1694
Score = 96.7 bits (239), Expect = 1e-18
Identities = 44/66 (66%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ Y+P+ P +SP+
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPT 1730
Query: 388 STSQYT 371
S S Y+
Sbjct: 1731 SPSLYS 1736
Score = 96.3 bits (238), Expect = 1e-18
Identities = 48/74 (64%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPS 410
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPT 1709
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS + YTP
Sbjct: 1710 SPSYSPSSPN-YTP 1722
Score = 95.5 bits (236), Expect = 2e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1601 YSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1661 SPS-YSP 1666
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSP+SP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1587 YSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1647 SPS-YSP 1652
Score = 90.1 bits (222), Expect = 1e-16
Identities = 44/66 (66%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+PTS +YSPTSPSYSPSSP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1581 TPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1640
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1641 PS-YSP 1645
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SPSYSP SP YSP+SP+YSP+SP + SP Y+P+SPQ+SP S YSP+ P YSPS
Sbjct: 1740 YSPASPSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPS 1799
Query: 388 STSQYTP 368
S S +TP
Sbjct: 1800 SPS-HTP 1805
Score = 88.6 bits (218), Expect = 3e-16
Identities = 46/84 (54%), Positives = 56/84 (66%), Gaps = 15/84 (17%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------STGYSP 413
YSPTSPSYSPTSPSY+ SP Y+P+SP S TSP YSP+SP +SP ST YSP
Sbjct: 1754 YSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYSP 1813
Query: 412 SQPGYSPSSTS------QYTPKTN 359
+ P YSP+S S QY+P ++
Sbjct: 1814 TSPKYSPTSLSYSPASPQYSPSSS 1837
Score = 88.2 bits (217), Expect = 4e-16
Identities = 44/73 (60%), Positives = 54/73 (73%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-------STGYSPSQ 407
YSPTSPSYSPTSPSYS +SP+YSP+SP S +SP+Y+P+SP FSP S YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPAS 1744
Query: 406 PGYSPSSTSQYTP 368
P YSP S +Y+P
Sbjct: 1745 PSYSPGS-PKYSP 1756
Score = 87.4 bits (215), Expect = 7e-16
Identities = 48/79 (60%), Positives = 54/79 (68%), Gaps = 13/79 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD------YSPSSPQFSP-STGYSPSQ 407
YS TSPSYSPTSPSYSPSSP Y+P+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1699 YSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPASPSYSPGSPKYSPTS 1758
Query: 406 PGYSPSSTS------QYTP 368
P YSP+S S QYTP
Sbjct: 1759 PSYSPTSPSYASVSPQYTP 1777
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPS-YSP 1687
Score = 85.9 bits (211), Expect = 2e-15
Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP---GY 398
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 397 SPS---STSQYTP 368
SPS ++ Y+P
Sbjct: 1696 SPSYSRTSPSYSP 1708
Score = 85.5 bits (210), Expect = 3e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
++PTSPS +PTS +YSP+SP+YSPSSP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1573 FAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1633 SPS-YSP 1638
Score = 82.8 bits (203), Expect = 2e-14
Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 9/79 (11%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN--------SGTSPDYSPSSPQFSP-STGYSP 413
Y+PTSP YSPTSP+YSP+SP+YSPSSP + S TSP YSP+S +SP S YSP
Sbjct: 1775 YTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSP 1834
Query: 412 SQPGYSPSSTSQYTPKTND 356
S YSP+S + YTP + D
Sbjct: 1835 SSSKYSPTSPT-YTPTSPD 1852
Score = 81.6 bits (200), Expect = 4e-14
Identities = 40/62 (64%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YSPTS SYSP SP YSPSS YSP+SP + TSPDYS SSP +SP+ YSP+ P YSP
Sbjct: 1818 YSPTSLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPTYSP 1877
Query: 391 SS 386
+S
Sbjct: 1878 TS 1879
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Frame = -3
Query: 565 YSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 407
+SPTSPS YSP SPSYSP SP YSP+SP S TSP Y+ SPQ++P S YSP+
Sbjct: 1727 FSPTSPSLYSSPRYSPASPSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTS 1786
Query: 406 PGYSPSSTSQYTPKTNDNKDDPGTK 332
P YSP+S S Y+P + + T+
Sbjct: 1787 PTYSPTSPS-YSPSSPSHTPGASTR 1810
Score = 77.0 bits (188), Expect = 9e-13
Identities = 37/63 (58%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SPSYSP+SP+++P+SP+ +P+S S TSP YSPSSP +SP S YSP+ P YSP+S S
Sbjct: 1563 SPSYSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPS- 1621
Query: 376 YTP 368
Y+P
Sbjct: 1622 YSP 1624
Score = 75.1 bits (183), Expect = 3e-12
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPS--------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSP 413
YSP+SPS YSPTSP YSP+S +YSP+SP S +S YSP+SP ++P S YS
Sbjct: 1796 YSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSA 1855
Query: 412 SQPGYSPSSTSQYTP 368
S P YSP+ Y+P
Sbjct: 1856 SSPTYSPTGPPSYSP 1870
Score = 66.2 bits (160), Expect = 2e-09
Identities = 30/44 (68%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGTSPDYSPSSPQF 437
YSPTSP+Y+PTSP YS SSPTYSP+ P + S TSP YSP+SP++
Sbjct: 1839 YSPTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPTYSPTSPEY 1882
Score = 60.5 bits (145), Expect = 9e-08
Identities = 40/80 (50%), Positives = 47/80 (58%), Gaps = 13/80 (16%)
Frame = -3
Query: 562 SPTSPSYSPTSPSY-SPSSPTYSPSSPY----NSGTSPDYSPSSPQFSP--------STG 422
S SP YSP SP SPSSP S +SPY G SP YSPSSP F+P S+
Sbjct: 1528 SGLSPGYSPWSPQPGSPSSPGPS-NSPYVPSPGGGMSPSYSPSSPAFAPTSPSMTPTSSN 1586
Query: 421 YSPSQPGYSPSSTSQYTPKT 362
YSP+ P YSPSS + Y+P +
Sbjct: 1587 YSPTSPSYSPSSPN-YSPNS 1605
[82][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma floridae
RepID=UPI000186501C
Length = 1956
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/69 (66%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPT 1779
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1780 SPS-YSPSS 1787
Score = 95.5 bits (236), Expect = 2e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPT 1758
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1759 SPS-YSP 1764
Score = 94.4 bits (233), Expect = 5e-18
Identities = 48/75 (64%), Positives = 55/75 (73%), Gaps = 8/75 (10%)
Frame = -3
Query: 565 YSPTSPS-------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+ YSPTSPSYSP+SP+YSP+SP S TSP YSPSSP +SP S YSPS
Sbjct: 1741 YSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPS 1800
Query: 409 QPGYSPSSTSQYTPK 365
P YSPSS + +PK
Sbjct: 1801 SPSYSPSSPNPSSPK 1815
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/66 (65%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+P SP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1609 TPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1669 PS-YSP 1673
Score = 87.8 bits (216), Expect = 5e-16
Identities = 46/71 (64%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP---QFSPSTGYSPSQPGYS 395
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP SPS YSPS P YS
Sbjct: 1734 YSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPS--YSPSSPNYS 1791
Query: 394 PSSTSQYTPKT 362
P S S Y+P +
Sbjct: 1792 PQSPS-YSPSS 1801
Score = 87.8 bits (216), Expect = 5e-16
Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP++P Y+PTSP YSP+SPTY+P+SP S TSP Y+P +P++SP S YSP+ P YSP+
Sbjct: 1858 YSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPT 1917
Query: 388 ST--SQYTPKT 362
S S Y+P T
Sbjct: 1918 SPKGSTYSPTT 1928
Score = 87.0 bits (214), Expect = 9e-16
Identities = 47/79 (59%), Positives = 54/79 (68%), Gaps = 13/79 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT------------YSPSSPYNSGTSPDYSPSSPQFSPSTG 422
YSP SPSYSP+SPSYSPSSP YSPSSP S +SP YSP+SP +SPS+
Sbjct: 1790 YSPQSPSYSPSSPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSA 1849
Query: 421 -YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP ST +YTP
Sbjct: 1850 KYSPASPSYSP-STPKYTP 1867
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
Y+PTSP YSP+SP YSPSSP YSP+SP S +S YSP+SP +SPST Y+P+ P YSP+
Sbjct: 1816 YTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPA 1875
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1876 SPT-YTP 1881
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/72 (56%), Positives = 56/72 (77%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
Y+PTSP YSPTSPSY+P +P YSP+SP S TSP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1879 YTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGST---YSPTTPGYSPAS 1935
Query: 385 TSQYTPKTNDNK 350
+ Y+P++ +++
Sbjct: 1936 PT-YSPESPESR 1946
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPS-YSP 1736
Score = 85.5 bits (210), Expect = 3e-15
Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 7/75 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSP+SP YSP+SPTYSPSS S SP YSPS+P+++P S YSP+ P Y+P+
Sbjct: 1823 YSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPT 1882
Query: 388 S------TSQYTPKT 362
S + YTP T
Sbjct: 1883 SPKYSPTSPSYTPDT 1897
Score = 85.1 bits (209), Expect = 3e-15
Identities = 42/66 (63%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+P+SP Y+PTSP YSPSSP YSPSSP S TSP YSPSS ++SP S YSPS P Y+P+S
Sbjct: 1810 NPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTS 1869
Query: 385 TSQYTP 368
+Y+P
Sbjct: 1870 -PKYSP 1874
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/70 (62%), Positives = 55/70 (78%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQP----GY 398
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP++SP+ SPS Y
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPT---SPSYSPTSPSY 1769
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1770 SPASPS-YSP 1778
Score = 84.7 bits (208), Expect = 4e-15
Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSP++P Y+P+SP YSP+SP + TSP YSP+SP ++P T YSP+ P YSP+
Sbjct: 1851 YSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPT 1910
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1911 SPT-YSP 1916
Score = 84.0 bits (206), Expect = 7e-15
Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 409 QPGYSPSSTSQYTP 368
P Y+P+S +Y+P
Sbjct: 1745 SPNYTPTS-PKYSP 1757
Score = 84.0 bits (206), Expect = 7e-15
Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSP+S YSP+SP+YSPS+P + TSP YSP+SP ++P S YSP+ P Y+P
Sbjct: 1837 YSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTP- 1895
Query: 388 STSQYTP 368
T +Y+P
Sbjct: 1896 DTPKYSP 1902
Score = 83.2 bits (204), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSP SP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 67.8 bits (164), Expect = 5e-10
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 10/75 (13%)
Frame = -3
Query: 562 SPTSPSYS-PTSPSYSPSSPTY--------SPSSPYNSGTSPDYSPSSPQFSP-STGYSP 413
SP PS P SPSYSP+SP Y +P SP S TSP YSP+SP +SP S YSP
Sbjct: 1579 SPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSP 1638
Query: 412 SQPGYSPSSTSQYTP 368
+ P YSP+S S Y+P
Sbjct: 1639 TSPSYSPTSPS-YSP 1652
[83][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase II subunit A) (DNA-directed RNA polymerase III
largest subunit) n=1 Tax=Equus caballus
RepID=UPI0001796DD3
Length = 1834
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1745 SPN-YSP 1750
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1759 SPS-YSP 1764
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1780 SPN-YSP 1785
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 94.0 bits (232), Expect = 7e-18
Identities = 43/67 (64%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP+T YSP+ P YSP+
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSPT 1807
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1808 SPG-YSP 1813
Score = 94.0 bits (232), Expect = 7e-18
Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP++P +SP S YSP+ PGYSP+
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSPTSPGYSPT 1814
Query: 388 STSQYTPKTNDNKDD 344
S + + DD
Sbjct: 1815 SPTYSLTSPAISPDD 1829
Score = 92.8 bits (229), Expect = 2e-17
Identities = 43/77 (55%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1734 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPT 1793
Query: 388 STSQYTPKTNDNKDDPG 338
+ S + + PG
Sbjct: 1794 TPSYSPTSPSYSPTSPG 1810
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPS-YSP 1736
Score = 86.3 bits (212), Expect = 1e-15
Identities = 45/73 (61%), Positives = 53/73 (72%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+ T SPS
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 1765
Query: 397 SPS---STSQYTP 368
SPS ++ YTP
Sbjct: 1766 SPSYSPTSPNYTP 1778
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 81.3 bits (199), Expect = 5e-14
Identities = 37/64 (57%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSP+YSP+SP+YSP++P S TSP YSP+SP +SP S YS + P SP
Sbjct: 1769 YSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSPTSPGYSPTSPTYSLTSPAISPD 1828
Query: 388 STSQ 377
+ +
Sbjct: 1829 DSDE 1832
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPS-YSP 1666
Score = 77.8 bits (190), Expect = 5e-13
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 5/78 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 401
YSPTSPSYSPTSP+Y+P+SP YSP SP T+P YSP+SP +SP S GYSP+ P
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP----TTPSYSPTSPSYSPTSPGYSPTSPT 1817
Query: 400 YSPSSTSQYTPKTNDNKD 347
YS +S + +P +D ++
Sbjct: 1818 YSLTSPA-ISPDDSDEEN 1834
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1577 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1629
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1630 SPTSPN-YSP 1638
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1562 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1618 TSPS-YSP 1624
[84][TOP]
>UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B3
Length = 1018
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 819 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 878
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 879 SPS-YSP 884
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 840 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 899
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 900 SPS-YSP 905
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 847 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 906
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 907 SPS-YSP 912
Score = 93.6 bits (231), Expect = 9e-18
Identities = 43/60 (71%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 854 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 913
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 812 YGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 871
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 872 SPS-YSP 877
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 826 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 885
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 886 SPSYSPTSPS-YSP 898
Score = 85.1 bits (209), Expect = 3e-15
Identities = 42/62 (67%), Positives = 49/62 (79%), Gaps = 5/62 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS----QPG 401
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ QP
Sbjct: 861 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTFAKLQPN 920
Query: 400 YS 395
+S
Sbjct: 921 FS 922
Score = 82.8 bits (203), Expect = 2e-14
Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y SP Y TSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 805 YGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 864
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 865 SPS-YSP 870
Score = 79.7 bits (195), Expect = 1e-13
Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y TSP+Y SP Y +SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 798 YGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 857
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 858 SPS-YSP 863
Score = 72.0 bits (175), Expect = 3e-11
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = -3
Query: 562 SPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
SPTSP +Y TSP+Y +SP Y +SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 791 SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 850
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 851 SPS-YSP 856
[85][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF13
Length = 1932
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1658 SPS-YSP 1663
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1679 SPS-YSP 1684
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1700 SPS-YSP 1705
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1637 SPS-YSP 1642
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P S YSP+ P YSP+
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1734
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1735 SPN-YTP 1740
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSP+ P YSPS
Sbjct: 1710 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1769
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 1770 S-PRYTPQS 1777
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1647 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1706
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1707 SPN-YSP 1712
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1720
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1721 SPS-YSP 1726
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1668 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 1727
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1728 SPS-YSP 1733
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1752 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS 1811
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1812 S-PEYTP 1817
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1741
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1742 SPN-YSP 1747
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP S YSPS P Y+P
Sbjct: 1717 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1776
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 1777 SPT-YTPSS 1784
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1570 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1630 SPS-YSP 1635
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 1724 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1783
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 1784 SPSYSPSSPS-YSP 1796
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1836 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1895
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1896 SPKGSTYSP 1904
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1787 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1845
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1846 TTPKYSP 1852
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1794 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1853
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1854 SPT-YSP 1859
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1822 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1881
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1882 S-PKYSP 1887
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1850 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1909
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1910 SPTSPTYSLTSPAISPDD 1927
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1773 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1832
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1833 S-PKYSP 1838
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1664
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1665 SPSYSPTSPS-YSP 1677
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1685
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1686 SPSYSPTSPS-YSP 1698
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1815 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1874
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1875 SPT-YSP 1880
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1584 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1643
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1644 SPSYSPTSPS-YSP 1656
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP ++P S YSP+
Sbjct: 1689 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1748
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1749 SPSYSPTSPS-YSP 1761
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP+Y+PTSP+YSP+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 1731 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1790
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 1791 SPSYSPTS-PKYTP 1803
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1552 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1611
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1612 YSPTSPSYSPTSPS-YSP 1628
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1801 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1856
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 1857 YSPTS-PVYTP 1866
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1864 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1923
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1924 SPDDSDE 1930
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1539 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1591
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1592 SPTSPN-YSP 1600
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1524 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1579
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1580 TSPS-YSP 1586
[86][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF12
Length = 1970
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P S YSP+ P YSP+
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1772
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1773 SPN-YTP 1778
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSP+ P YSPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 1808 S-PRYTPQS 1815
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1745 SPN-YSP 1750
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1759 SPS-YSP 1764
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 1765
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1766 SPS-YSP 1771
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1790 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS 1849
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1850 S-PEYTP 1855
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1780 SPN-YSP 1785
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP S YSPS P Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 1815 SPT-YTPSS 1822
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 1822 SPSYSPSSPS-YSP 1834
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1934 SPKGSTYSP 1942
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1825 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1883
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1884 TTPKYSP 1890
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1832 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1892 SPT-YSP 1897
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1920 S-PKYSP 1925
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1947
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1948 SPTSPTYSLTSPAISPDD 1965
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1811 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1870
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1871 S-PKYSP 1876
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPS-YSP 1736
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1853 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1913 SPT-YSP 1918
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP ++P S YSP+
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1786
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1787 SPSYSPTSPS-YSP 1799
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP+Y+PTSP+YSP+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 1769 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1828
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 1829 SPSYSPTS-PKYTP 1841
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPS-YSP 1666
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1839 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1894
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 1895 YSPTS-PVYTP 1904
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1961
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1962 SPDDSDE 1968
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1577 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1629
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1630 SPTSPN-YSP 1638
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1562 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1618 TSPS-YSP 1624
[87][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
Length = 1970
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P S YSP+ P YSP+
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1772
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1773 SPN-YTP 1778
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSP+ P YSPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 1808 S-PRYTPQS 1815
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1745 SPN-YSP 1750
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1759 SPS-YSP 1764
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 1765
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1766 SPS-YSP 1771
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1790 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS 1849
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1850 S-PEYTP 1855
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1780 SPN-YSP 1785
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP S YSPS P Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 1815 SPT-YTPSS 1822
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 1822 SPSYSPSSPS-YSP 1834
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1934 SPKGSTYSP 1942
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1825 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1883
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1884 TTPKYSP 1890
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1832 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1892 SPT-YSP 1897
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1920 S-PKYSP 1925
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1947
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1948 SPTSPTYSLTSPAISPDD 1965
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1811 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1870
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1871 S-PKYSP 1876
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPS-YSP 1736
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1853 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1913 SPT-YSP 1918
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP ++P S YSP+
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1786
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1787 SPSYSPTSPS-YSP 1799
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP+Y+PTSP+YSP+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 1769 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1828
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 1829 SPSYSPTS-PKYTP 1841
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPS-YSP 1666
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1839 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1894
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 1895 YSPTS-PVYTP 1904
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1577 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1629
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1630 SPTSPN-YSP 1638
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1562 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1618 TSPS-YSP 1624
[88][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
RepID=UPI0000546D90
Length = 1972
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1700 SPS-YSP 1705
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1720
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1721 SPS-YSP 1726
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1741
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1742 SPS-YSP 1747
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1689 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1748
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1749 SPS-YSP 1754
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1679 SPS-YSP 1684
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P YSP+
Sbjct: 1724 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPT 1783
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1784 SPN-YTP 1789
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P YSPS
Sbjct: 1752 YSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPS 1811
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 1812 S-PRYTPQS 1819
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1703 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPT 1762
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1763 SPS-YSP 1768
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1717 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPT 1776
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1777 SPS-YSP 1782
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/69 (65%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSPS P Y+P
Sbjct: 1759 YTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQ 1818
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 1819 SPT-YTPSS 1826
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1794 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS 1853
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1854 S-PEYTP 1859
Score = 94.4 bits (233), Expect = 5e-18
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 1766 YSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1825
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 1826 SPSYSPSSPS-YSP 1838
Score = 92.8 bits (229), Expect = 2e-17
Identities = 44/78 (56%), Positives = 59/78 (75%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG----YSPSQPGY 398
YSPTSP+YSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SP++ YSP+ PGY
Sbjct: 1892 YSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1951
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + Y+P + + D
Sbjct: 1952 SPTSPT-YSPAISPDDSD 1968
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1612 YTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1671
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1672 SPS-YSP 1677
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1829 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1887
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1888 TTPKYSP 1894
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1836 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1895
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1896 SPT-YSP 1901
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1878 YSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1937
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1938 SPKGSTYSP 1946
Score = 90.1 bits (222), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1864 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPT 1923
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1924 S-PKYSP 1929
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1815 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1874
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1875 S-PKYSP 1880
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1857 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPT 1916
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1917 SPT-YSP 1922
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1647 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1706
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1707 SPSYSPTSPS-YSP 1719
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1668 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1727
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1728 SPSYSPTSPS-YSP 1740
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1626 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1685
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1686 SPSYSPTSPS-YSP 1698
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP +SP S Y+P+
Sbjct: 1731 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPT 1790
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1791 SPNYSPTSPS-YSP 1803
Score = 80.9 bits (198), Expect = 6e-14
Identities = 43/74 (58%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSPSYSPTSP+Y+P+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 1773 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1832
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 1833 SPSYSPTS-PKYTP 1845
Score = 78.6 bits (192), Expect = 3e-13
Identities = 42/71 (59%), Positives = 52/71 (73%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1843 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1898
Query: 400 YSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1899 YSPTSPT-YTP 1908
Score = 76.6 bits (187), Expect = 1e-12
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 17/83 (20%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS----------------YSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 434
+ SP+YSPTSP+ YSP+SP+YSP+SP S TSP+YSP+SP +S
Sbjct: 1589 FGALSPNYSPTSPAYEPRSPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYS 1648
Query: 433 P-STGYSPSQPGYSPSSTSQYTP 368
P S YSP+ P YSP+S S Y+P
Sbjct: 1649 PTSPSYSPTSPSYSPTSPS-YSP 1670
Score = 53.9 bits (128), Expect = 8e-06
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 10/72 (13%)
Frame = -3
Query: 553 SPSYSPT--SP-SYSPSSPTYSPSSPYNS----GTSPDYSPSSPQF---SPSTGYSPSQP 404
SP++SPT SP S P+SP Y PS Y + SP+YSP+SP + SP GY+P P
Sbjct: 1559 SPAWSPTPGSPGSPGPASP-YIPSPGYITLHFGALSPNYSPTSPAYEPRSPGGGYTPQSP 1617
Query: 403 GYSPSSTSQYTP 368
GYSP+S S Y+P
Sbjct: 1618 GYSPTSPS-YSP 1628
[89][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25C
Length = 1968
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1697
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1698 SPS-YSP 1703
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1659 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1718
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1719 SPS-YSP 1724
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1680 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1739
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1740 SPS-YSP 1745
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1617 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1676
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1677 SPS-YSP 1682
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P S YSP+ P YSP+
Sbjct: 1715 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1774
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1775 SPN-YTP 1780
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSP+ P YSPS
Sbjct: 1750 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1809
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 1810 S-PRYTPQS 1817
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1687 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1746
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1747 SPN-YSP 1752
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1760
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1761 SPS-YSP 1766
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1708 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 1767
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1768 SPS-YSP 1773
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1792 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS 1851
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1852 S-PEYTP 1857
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 1722 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1781
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1782 SPN-YSP 1787
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP S YSPS P Y+P
Sbjct: 1757 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1816
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 1817 SPT-YTPSS 1824
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1610 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1669
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1670 SPS-YSP 1675
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 1764 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1823
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 1824 SPSYSPSSPS-YSP 1836
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1876 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1935
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1936 SPKGSTYSP 1944
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1827 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1885
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1886 TTPKYSP 1892
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1834 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1893
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1894 SPT-YSP 1899
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1862 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1921
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1922 S-PKYSP 1927
Score = 89.0 bits (219), Expect = 2e-16
Identities = 41/64 (64%), Positives = 51/64 (79%), Gaps = 4/64 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1890 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1949
Query: 397 SPSS 386
SP+S
Sbjct: 1950 SPTS 1953
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1813 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1872
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1873 S-PKYSP 1878
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1645 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1704
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1705 SPSYSPTSPS-YSP 1717
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1666 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1725
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1726 SPSYSPTSPS-YSP 1738
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1855 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1914
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1915 SPT-YSP 1920
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1624 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1683
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1684 SPSYSPTSPS-YSP 1696
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP ++P S YSP+
Sbjct: 1729 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1788
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1789 SPSYSPTSPS-YSP 1801
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP+Y+PTSP+YSP+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 1771 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1830
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 1831 SPSYSPTS-PKYTP 1843
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1592 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1651
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1652 YSPTSPSYSPTSPS-YSP 1668
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1841 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1896
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 1897 YSPTS-PVYTP 1906
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1579 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1631
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1632 SPTSPN-YSP 1640
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1564 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1619
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1620 TSPS-YSP 1626
[90][TOP]
>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25B
Length = 1932
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1658 SPS-YSP 1663
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1679 SPS-YSP 1684
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1700 SPS-YSP 1705
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1637 SPS-YSP 1642
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P S YSP+ P YSP+
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1734
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1735 SPN-YTP 1740
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSP+ P YSPS
Sbjct: 1710 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1769
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 1770 S-PRYTPQS 1777
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1647 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1706
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1707 SPN-YSP 1712
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1720
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1721 SPS-YSP 1726
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1668 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 1727
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1728 SPS-YSP 1733
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1752 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS 1811
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1812 S-PEYTP 1817
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1741
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1742 SPN-YSP 1747
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP S YSPS P Y+P
Sbjct: 1717 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1776
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 1777 SPT-YTPSS 1784
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1570 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1630 SPS-YSP 1635
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 1724 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1783
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 1784 SPSYSPSSPS-YSP 1796
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1836 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1895
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1896 SPKGSTYSP 1904
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1787 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1845
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1846 TTPKYSP 1852
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1794 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1853
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1854 SPT-YSP 1859
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1822 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1881
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1882 S-PKYSP 1887
Score = 89.0 bits (219), Expect = 2e-16
Identities = 41/64 (64%), Positives = 51/64 (79%), Gaps = 4/64 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1850 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1909
Query: 397 SPSS 386
SP+S
Sbjct: 1910 SPTS 1913
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1773 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1832
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1833 S-PKYSP 1838
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1664
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1665 SPSYSPTSPS-YSP 1677
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1685
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1686 SPSYSPTSPS-YSP 1698
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1815 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1874
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1875 SPT-YSP 1880
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1584 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1643
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1644 SPSYSPTSPS-YSP 1656
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP ++P S YSP+
Sbjct: 1689 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1748
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1749 SPSYSPTSPS-YSP 1761
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP+Y+PTSP+YSP+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 1731 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1790
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 1791 SPSYSPTS-PKYTP 1803
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1552 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1611
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1612 YSPTSPSYSPTSPS-YSP 1628
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1801 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1856
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 1857 YSPTS-PVYTP 1866
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1864 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1923
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1924 SPEDSDE 1930
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1539 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1591
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1592 SPTSPN-YSP 1600
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1524 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1579
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1580 TSPS-YSP 1586
[91][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Rattus norvegicus RepID=UPI0000DA33D8
Length = 1970
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P S YSP+ P YSP+
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1772
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1773 SPN-YTP 1778
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSP+ P YSPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 1808 S-PRYTPQS 1815
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1745 SPN-YSP 1750
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1759 SPS-YSP 1764
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 1765
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1766 SPS-YSP 1771
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1790 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS 1849
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1850 S-PEYTP 1855
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1780 SPN-YSP 1785
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP S YSPS P Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 1815 SPT-YTPSS 1822
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 1822 SPSYSPSSPS-YSP 1834
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1934 SPKGSTYSP 1942
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1825 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1883
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1884 TTPKYSP 1890
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1832 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1892 SPT-YSP 1897
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1920 S-PKYSP 1925
Score = 89.0 bits (219), Expect = 2e-16
Identities = 41/64 (64%), Positives = 51/64 (79%), Gaps = 4/64 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1947
Query: 397 SPSS 386
SP+S
Sbjct: 1948 SPTS 1951
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1811 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1870
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1871 S-PKYSP 1876
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPS-YSP 1736
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1853 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1913 SPT-YSP 1918
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP ++P S YSP+
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1786
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1787 SPSYSPTSPS-YSP 1799
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP+Y+PTSP+YSP+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 1769 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1828
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 1829 SPSYSPTS-PKYTP 1841
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPS-YSP 1666
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1839 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1894
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 1895 YSPTS-PVYTP 1904
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1961
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1962 SPEDSDE 1968
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1577 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1629
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1630 SPTSPN-YSP 1638
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1562 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1618 TSPS-YSP 1624
[92][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
RepID=O35559_CRIGR
Length = 1970
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P S YSP+ P YSP+
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1772
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1773 SPN-YTP 1778
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSP+ P YSPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 1808 S-PRYTPQS 1815
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1745 SPN-YSP 1750
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1759 SPS-YSP 1764
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 1765
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1766 SPS-YSP 1771
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1790 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS 1849
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1850 S-PEYTP 1855
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1780 SPN-YSP 1785
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP S YSPS P Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 1815 SPT-YTPSS 1822
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 1822 SPSYSPSSPS-YSP 1834
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1934 SPKGSTYSP 1942
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1825 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1883
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1884 TTPKYSP 1890
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1832 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1892 SPT-YSP 1897
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1920 S-PKYSP 1925
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1947
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1948 SPTSPTYSLTSPAISPDD 1965
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1811 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1870
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1871 S-PKYSP 1876
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPS-YSP 1736
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1853 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1913 SPT-YSP 1918
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP ++P S YSP+
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1786
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1787 SPSYSPTSPS-YSP 1799
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP+Y+PTSP+YSP+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 1769 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1828
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 1829 SPSYSPTS-PKYTP 1841
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPS-YSP 1666
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1839 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1894
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 1895 YSPTS-PVYTP 1904
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1961
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1962 SPDDSDE 1968
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1577 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1629
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1630 SPTSPN-YSP 1638
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1562 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1618 TSPS-YSP 1624
[93][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
Length = 1966
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P S YSP+ P YSP+
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1772
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1773 SPN-YTP 1778
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSP+ P YSPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 1808 S-PRYTPQS 1815
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1745 SPN-YSP 1750
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1759 SPS-YSP 1764
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 1765
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1766 SPS-YSP 1771
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1790 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS 1849
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1850 S-PEYTP 1855
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1780 SPN-YSP 1785
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP S YSPS P Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 1815 SPT-YTPSS 1822
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 1822 SPSYSPSSPS-YSP 1834
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1934 SPKGSTYSP 1942
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1832 YSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1892 SPT-YSP 1897
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1920 S-PKYSP 1925
Score = 89.4 bits (220), Expect = 2e-16
Identities = 44/79 (55%), Positives = 58/79 (73%), Gaps = 6/79 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1947
Query: 397 SPSST--SQYTPKTNDNKD 347
SP+S S +P +D ++
Sbjct: 1948 SPTSPTYSLTSPAISDEEN 1966
Score = 89.0 bits (219), Expect = 2e-16
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP
Sbjct: 1825 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSP- 1883
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1884 TTPKYSP 1890
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1811 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPT 1870
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1871 S-PKYSP 1876
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPS-YSP 1736
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 84.3 bits (207), Expect = 6e-15
Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1853 YTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1913 SPT-YSP 1918
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP ++P S YSP+
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1786
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1787 SPSYSPTSPS-YSP 1799
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP+Y+PTSP+YSP+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 1769 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1828
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 1829 SPSYSPTS-PKYTP 1841
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPS-YSP 1666
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1839 YTPTSPSYSPSSPEYTPASPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1894
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 1895 YSPTS-PVYTP 1904
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1577 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1629
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1630 SPTSPN-YSP 1638
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1562 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1618 TSPS-YSP 1624
[94][TOP]
>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3ZES3_BRAFL
Length = 1934
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 95.5 bits (236), Expect = 2e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPT 1758
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1759 SPS-YSP 1764
Score = 94.0 bits (232), Expect = 7e-18
Identities = 44/66 (66%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPT 1779
Query: 388 STSQYT 371
S T
Sbjct: 1780 ILSNLT 1785
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/66 (65%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+P SP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1609 TPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1669 PS-YSP 1673
Score = 88.2 bits (217), Expect = 4e-16
Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 19/85 (22%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-------------- 428
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SP+
Sbjct: 1734 YSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTILSNLTQLQPHLTP 1793
Query: 427 -----TGYSPSQPGYSPSSTSQYTP 368
T YSPS P YSPSS +Y+P
Sbjct: 1794 VHSHVTQYSPSSPKYSPSS-PKYSP 1817
Score = 87.8 bits (216), Expect = 5e-16
Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP++P Y+PTSP YSP+SPTY+P+SP S TSP Y+P +P++SP S YSP+ P YSP+
Sbjct: 1836 YSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPT 1895
Query: 388 ST--SQYTPKT 362
S S Y+P T
Sbjct: 1896 SPKGSTYSPTT 1906
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/72 (56%), Positives = 56/72 (77%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
Y+PTSP YSPTSPSY+P +P YSP+SP S TSP YSP+SP+ S YSP+ PGYSP+S
Sbjct: 1857 YTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGST---YSPTTPGYSPAS 1913
Query: 385 TSQYTPKTNDNK 350
+ Y+P++ +++
Sbjct: 1914 PT-YSPESPESR 1924
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPS-YSP 1736
Score = 85.9 bits (211), Expect = 2e-15
Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 8/76 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPS 410
YSP+SP YSP+SP YSP+SPTYSPSS S SP YSPS+P+++P S Y+P+
Sbjct: 1801 YSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPT 1860
Query: 409 QPGYSPSSTSQYTPKT 362
P YSP+S S YTP T
Sbjct: 1861 SPKYSPTSPS-YTPDT 1875
Score = 85.1 bits (209), Expect = 3e-15
Identities = 45/75 (60%), Positives = 56/75 (74%), Gaps = 4/75 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQP----GY 398
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP++SP+ SPS Y
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPT---SPSYSPTSPSY 1769
Query: 397 SPSSTSQYTPKTNDN 353
SP+S S Y+P N
Sbjct: 1770 SPASPS-YSPTILSN 1783
Score = 84.0 bits (206), Expect = 7e-15
Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 409 QPGYSPSSTSQYTP 368
P Y+P+S +Y+P
Sbjct: 1745 SPNYTPTS-PKYSP 1757
Score = 83.2 bits (204), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSP SP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 81.3 bits (199), Expect = 5e-14
Identities = 47/87 (54%), Positives = 55/87 (63%), Gaps = 19/87 (21%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------------------SGTSPDYSPSSPQ 440
YSPTSPSYSPTSPSYSP+SP+YSP+ N S +SP YSPSSP+
Sbjct: 1755 YSPTSPSYSPTSPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSSPK 1814
Query: 439 FSP-STGYSPSQPGYSPSSTSQYTPKT 362
+SP S YSPS YSP+S S Y+P T
Sbjct: 1815 YSPTSPTYSPSSAKYSPASPS-YSPST 1840
Score = 72.8 bits (177), Expect = 2e-11
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSP+S YSP SPSYS P+SP YSP+SP + TSP YSP+SP ++P T YSP+
Sbjct: 1822 YSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPT 1881
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1882 SPKYSPTSPT-YSP 1894
Score = 70.1 bits (170), Expect = 1e-10
Identities = 45/99 (45%), Positives = 53/99 (53%), Gaps = 33/99 (33%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS--------------------------------PSSPTYSPSSPY 482
YSPTSPSYSP SPSYS PSSP YSP+SP
Sbjct: 1762 YSPTSPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSSPKYSPTSPT 1821
Query: 481 NSGTSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 368
S +S YSP+SP +SPST Y+P+ P YSP+S + YTP
Sbjct: 1822 YSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPT-YTP 1859
Score = 67.8 bits (164), Expect = 5e-10
Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 10/75 (13%)
Frame = -3
Query: 562 SPTSPSYS-PTSPSYSPSSPTY--------SPSSPYNSGTSPDYSPSSPQFSP-STGYSP 413
SP PS P SPSYSP+SP Y +P SP S TSP YSP+SP +SP S YSP
Sbjct: 1579 SPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSP 1638
Query: 412 SQPGYSPSSTSQYTP 368
+ P YSP+S S Y+P
Sbjct: 1639 TSPSYSPTSPS-YSP 1652
[95][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
Length = 1935
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1661 SPS-YSP 1666
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1682 SPS-YSP 1687
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1703 SPS-YSP 1708
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1738 SPN-YTP 1743
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSP+ P YSPS
Sbjct: 1713 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1772
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 1773 S-PRYTPQS 1780
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1710 SPN-YSP 1715
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1723
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1724 SPS-YSP 1729
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 1730
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1731 SPS-YSP 1736
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1744
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1745 SPN-YSP 1750
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP S YSPS P Y+P
Sbjct: 1720 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1779
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 1780 SPT-YTPSS 1787
Score = 94.0 bits (232), Expect = 7e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+S YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1640 SPS-YSP 1645
Score = 94.0 bits (232), Expect = 7e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1755 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPS 1814
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1815 S-PEYTP 1820
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 1727 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1786
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 1787 SPSYSPSSPS-YSP 1799
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+S S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1573 YTPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1633 SPS-YSP 1638
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPT P+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1839 YSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPT 1898
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1899 SPKGSTYSP 1907
Score = 89.0 bits (219), Expect = 2e-16
Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 11/85 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-----------TGY 419
YSPT+P YSPTSP+YSP+SP Y+P+SP S TSP YSP+SPQ+SP+ + Y
Sbjct: 1846 YSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTY 1905
Query: 418 SPSQPGYSPSSTSQYTPKTNDNKDD 344
SP+ PGYSP+S + + DD
Sbjct: 1906 SPTSPGYSPTSPTYSLTSPAISPDD 1930
Score = 88.2 bits (217), Expect = 4e-16
Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SPTSP YSPTSP YSP+ PTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1825 FSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1884
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1885 S-PQYSP 1890
Score = 87.8 bits (216), Expect = 5e-16
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP YSPSSP + TSP +SP+SP++SP S YSP+ P YSP
Sbjct: 1790 YSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGPTYSP- 1848
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1849 TTPKYSP 1855
Score = 87.4 bits (215), Expect = 7e-16
Identities = 42/67 (62%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSP Y+PTSP YSPSSP Y+P+SP S TSP YSP+SP++SP+ YSP+ P YSP+
Sbjct: 1797 YSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPT 1856
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1857 SPT-YSP 1862
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPS-YSP 1680
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPS-YSP 1701
Score = 86.3 bits (212), Expect = 1e-15
Identities = 40/67 (59%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S +SP+ P YSP+
Sbjct: 1776 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPT 1835
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1836 S-PKYSP 1841
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP ++P S YSP+
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1751
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1752 SPSYSPTSPS-YSP 1764
Score = 82.0 bits (201), Expect = 3e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTS +YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1587 YSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1647 SPSYSPTSPS-YSP 1659
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP+Y+PTSP+YSP+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 1734 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1793
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 1794 SPSYSPTS-PKYTP 1806
Score = 78.6 bits (192), Expect = 3e-13
Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 2/64 (3%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSP-TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 380
SPSYSPTSP+Y P SP Y+P SP S TSP YSP+SP +SP S+ YSP+ P YSP+S S
Sbjct: 1555 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPS 1614
Query: 379 QYTP 368
Y+P
Sbjct: 1615 -YSP 1617
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1867 YTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1926
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1927 SPDDSDE 1933
Score = 58.5 bits (140), Expect = 3e-07
Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1542 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1594
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1595 SPTS-SNYSP 1603
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1527 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1582
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1583 TSPS-YSP 1589
[96][TOP]
>UniRef100_B4DET1 cDNA FLJ53860, highly similar to DNA-directed RNA polymerase II
largest subunit (EC 2.7.7.6) n=1 Tax=Homo sapiens
RepID=B4DET1_HUMAN
Length = 855
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 535 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 594
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 595 SPS-YSP 600
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 615
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 616 SPS-YSP 621
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 636
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 637 SPS-YSP 642
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 514 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 573
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 574 SPS-YSP 579
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P S YSP+ P YSP+
Sbjct: 612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 671
Query: 388 STSQYTP 368
S + YTP
Sbjct: 672 SPN-YTP 677
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSP+ P YSPS
Sbjct: 647 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 706
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 707 S-PRYTPQS 714
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 584 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 643
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 644 SPN-YSP 649
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 657
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 658 SPS-YSP 663
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 664
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 665 SPS-YSP 670
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 619 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 678
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 679 SPN-YSP 684
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP S YSPS P Y+P
Sbjct: 654 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 713
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 714 SPT-YTPSS 721
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 507 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 566
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 567 SPS-YSP 572
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 661 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 720
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 721 SPSYSPSSPS-YSP 733
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSP+
Sbjct: 689 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPT 748
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 749 S-PKYSP 754
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+T YSP+ P YSP+
Sbjct: 724 YSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 783
Query: 388 STSQYTP 368
S YTP
Sbjct: 784 S-PVYTP 789
Score = 89.0 bits (219), Expect = 2e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 745 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPT 804
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 805 S-PKYSP 810
Score = 88.2 bits (217), Expect = 4e-16
Identities = 42/67 (62%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P+SPSYSP+SPSYSP+SP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 717 YTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 776
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 777 SPT-YSP 782
Score = 87.8 bits (216), Expect = 5e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 710 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 768
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 769 TTPKYSP 775
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 542 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 601
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 602 SPSYSPTSPS-YSP 614
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 622
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 623 SPSYSPTSPS-YSP 635
Score = 85.9 bits (211), Expect = 2e-15
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 11/85 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-----------TGY 419
YSPT+P YSPTSP+YSP+SP Y+P+SP S T P YSP+SP++SP+ + Y
Sbjct: 766 YSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSPKGSTY 825
Query: 418 SPSQPGYSPSSTSQYTPKTNDNKDD 344
SP+ PGYSP+S + + DD
Sbjct: 826 SPTSPGYSPTSPTYSLTSPAISPDD 850
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 521 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 580
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 581 SPSYSPTSPS-YSP 593
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP ++P S YSP+
Sbjct: 626 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 685
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 686 SPSYSPTSPS-YSP 698
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP+Y+PTSP+YSP+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 668 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 727
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 728 SPSYSPTS-PKYTP 740
Score = 79.7 bits (195), Expect = 1e-13
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP+YS P+SPTYSP+SP + TSP YSP+ P +SP S YSP+
Sbjct: 752 YSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPT 811
Query: 409 QPGYSPSST--SQYTP 368
P YSP+S S Y+P
Sbjct: 812 SPTYSPTSPKGSTYSP 827
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 489 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 548
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 549 YSPTSPSYSPTSPS-YSP 565
Score = 79.0 bits (193), Expect = 2e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
Y+PTSP+YSPTSPSYS P+SP+YSPSSP + SP Y+PSSP +SPS+ YSP+
Sbjct: 675 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 734
Query: 409 QPGYSPSSTSQYTP 368
P Y+P+S +Y+P
Sbjct: 735 SPKYTPTS-PKYSP 747
Score = 73.9 bits (180), Expect = 8e-12
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPT P+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 787 YTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 846
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 847 SPDDSDE 853
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 476 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 528
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 529 SPTSPN-YSP 537
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 461 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 516
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 517 TSPS-YSP 523
[97][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
Length = 1970
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P S YSP+ P YSP+
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1772
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1773 SPN-YTP 1778
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSP+ P YSPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 1808 S-PRYTPQS 1815
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1745 SPN-YSP 1750
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1759 SPS-YSP 1764
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 1765
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1766 SPS-YSP 1771
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1790 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPS 1849
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1850 S-PEYTP 1855
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1780 SPN-YSP 1785
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP S YSPS P Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 1815 SPT-YTPSS 1822
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 1822 SPSYSPSSPS-YSP 1834
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1934 SPKGSTYSP 1942
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1920 S-PKYSP 1925
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1947
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1948 SPTSPTYSLTSPAISPDD 1965
Score = 89.0 bits (219), Expect = 2e-16
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSP SP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1825 YSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1883
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1884 TTPKYSP 1890
Score = 89.0 bits (219), Expect = 2e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1832 YSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1892 SPT-YSP 1897
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1811 YTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1870
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1871 S-PKYSP 1876
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPS-YSP 1736
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1853 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1913 SPT-YSP 1918
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP ++P S YSP+
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1786
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1787 SPSYSPTSPS-YSP 1799
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP+Y+PTSP+YSP+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 1769 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1828
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 1829 SPSYSPAS-PKYTP 1841
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPS-YSP 1666
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1839 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1894
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 1895 YSPTS-PVYTP 1904
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1961
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1962 SPDDSDE 1968
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1577 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1629
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1630 SPTSPN-YSP 1638
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1562 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1618 TSPS-YSP 1624
[98][TOP]
>UniRef100_C4VAM1 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4VAM1_NOSCE
Length = 1612
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1458 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1517
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1518 SPS-YSP 1523
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1479 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1538
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1539 SPS-YSP 1544
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1500 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1559
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1560 SPS-YSP 1565
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1521 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1580
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1581 SLS-YSP 1586
Score = 94.7 bits (234), Expect = 4e-18
Identities = 49/79 (62%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ YSP+
Sbjct: 1528 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSLSYSPT 1587
Query: 388 STSQYTP----KTNDNKDD 344
S S Y+P K D K++
Sbjct: 1588 SPS-YSPTGYKKDKDKKNE 1605
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1451 YGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1510
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1511 SPS-YSP 1516
Score = 87.0 bits (214), Expect = 9e-16
Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1542 YSPTSPSYSPTSPSYSPTSPSYSP-------TSPSYSPTSPSYSPTSLSYSPTSPSYSPT 1594
Query: 388 STSQYTPKTNDNK 350
+ K N+ K
Sbjct: 1595 GYKKDKDKKNERK 1607
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1465 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1524
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1525 SPSYSPTSPS-YSP 1537
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1486 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1545
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1546 SPSYSPTSPS-YSP 1558
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1507 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1566
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1567 SPSYSPTSPS-YSP 1579
Score = 83.2 bits (204), Expect = 1e-14
Identities = 41/67 (61%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+S SPSY SPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1444 FSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1503
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1504 SPS-YSP 1509
Score = 75.1 bits (183), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP +S SPSY +SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1437 YSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1496
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1497 SPS-YSP 1502
Score = 58.9 bits (141), Expect = 3e-07
Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP+Y YSP +S SP SP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1427 SPAYLAEESKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS- 1485
Query: 376 YTP 368
Y+P
Sbjct: 1486 YSP 1488
[99][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JYP8_SCHJY
Length = 1748
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1562 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1621
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1622 SPS-YSP 1627
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1583 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1642
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1643 SPS-YSP 1648
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1604 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1664 SPS-YSP 1669
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1685 SPS-YSP 1690
Score = 95.5 bits (236), Expect = 2e-18
Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPG 1705
Query: 388 STSQ 377
++Q
Sbjct: 1706 HSAQ 1709
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1555 YSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1614
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1615 SPS-YSP 1620
Score = 91.7 bits (226), Expect = 4e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SP+SPSYSP+SP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1548 FSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1607
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1608 SPS-YSP 1613
Score = 91.3 bits (225), Expect = 5e-17
Identities = 47/80 (58%), Positives = 55/80 (68%), Gaps = 14/80 (17%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------------S 428
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGHSAQNAQGRMSPRS 1719
Query: 427 TGYSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1720 PVYSPTSPSYSPTSPS-YSP 1738
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1569 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1628
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1629 SPSYSPTSPS-YSP 1641
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1590 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1649
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1650 SPSYSPTSPS-YSP 1662
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1611 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1670
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1671 SPSYSPTSPS-YSP 1683
Score = 86.3 bits (212), Expect = 1e-15
Identities = 44/79 (55%), Positives = 55/79 (69%), Gaps = 4/79 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP---GY 398
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1639 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1698
Query: 397 SPSSTSQYTPKTNDNKDDP 341
SPS + ++ + + P
Sbjct: 1699 SPSYSPGHSAQNAQGRMSP 1717
Score = 85.1 bits (209), Expect = 3e-15
Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 380
+SP +SP+SPSYSPSSP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1544 SSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1603
Query: 379 QYTP 368
Y+P
Sbjct: 1604 -YSP 1606
Score = 75.9 bits (185), Expect = 2e-12
Identities = 38/63 (60%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP +SP +SPSSP+YSPSSP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1538 SPFSGASSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS- 1596
Query: 376 YTP 368
Y+P
Sbjct: 1597 YSP 1599
Score = 75.1 bits (183), Expect = 3e-12
Identities = 40/72 (55%), Positives = 45/72 (62%), Gaps = 13/72 (18%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPS-------------SPYNSGTSPDYSPSSPQFSPST 425
YSPTSPSYSPTSPSYSP+SP+YSP SP S TSP YSP+SP
Sbjct: 1681 YSPTSPSYSPTSPSYSPTSPSYSPGHSAQNAQGRMSPRSPVYSPTSPSYSPTSP------ 1734
Query: 424 GYSPSQPGYSPS 389
YSP+ P YSP+
Sbjct: 1735 SYSPTSPRYSPN 1746
[100][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
RepID=RPB1_MOUSE
Length = 1970
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P S YSP+ P YSP+
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1772
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1773 SPN-YTP 1778
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSP+ P YSPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 1808 S-PRYTPQS 1815
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1745 SPN-YSP 1750
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1759 SPS-YSP 1764
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 1765
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1766 SPS-YSP 1771
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1790 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS 1849
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1850 S-PEYTP 1855
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1780 SPN-YSP 1785
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP S YSPS P Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 1815 SPT-YTPSS 1822
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 1822 SPSYSPSSPS-YSP 1834
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1934 SPKGSTYSP 1942
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1832 YSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1892 SPT-YSP 1897
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1920 S-PKYSP 1925
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1947
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1948 SPTSPTYSLTSPAISPDD 1965
Score = 89.0 bits (219), Expect = 2e-16
Identities = 42/67 (62%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP S YSP+ P YSP
Sbjct: 1825 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSP- 1883
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1884 TTPKYSP 1890
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1811 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPT 1870
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1871 S-PKYSP 1876
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPS-YSP 1736
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 84.3 bits (207), Expect = 6e-15
Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1853 YTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1913 SPT-YSP 1918
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP ++P S YSP+
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1786
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1787 SPSYSPTSPS-YSP 1799
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP+Y+PTSP+YSP+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 1769 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1828
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 1829 SPSYSPTS-PKYTP 1841
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPS-YSP 1666
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1839 YTPTSPSYSPSSPEYTPASPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1894
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 1895 YSPTS-PVYTP 1904
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1961
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1962 SPDDSDE 1968
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1577 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1629
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1630 SPTSPN-YSP 1638
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1562 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1618 TSPS-YSP 1624
[101][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Euarchontoglires
RepID=RPB1_HUMAN
Length = 1970
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1696 SPS-YSP 1701
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1717 SPS-YSP 1722
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1738 SPS-YSP 1743
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1675 SPS-YSP 1680
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P S YSP+ P YSP+
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1772
Query: 388 STSQYTP 368
S + YTP
Sbjct: 1773 SPN-YTP 1778
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSP+ P YSPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 1808 S-PRYTPQS 1815
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1745 SPN-YSP 1750
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1759 SPS-YSP 1764
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 1765
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1766 SPS-YSP 1771
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1790 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS 1849
Query: 388 STSQYTP 368
S +YTP
Sbjct: 1850 S-PEYTP 1855
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1780 SPN-YSP 1785
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP S YSPS P Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 1815 SPT-YTPSS 1822
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1668 SPS-YSP 1673
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 1822 SPSYSPSSPS-YSP 1834
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 1934 SPKGSTYSP 1942
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 1825 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 1883
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 1884 TTPKYSP 1890
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1832 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1892 SPT-YSP 1897
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1920 S-PKYSP 1925
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1947
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 1948 SPTSPTYSLTSPAISPDD 1965
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 1811 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1870
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1871 S-PKYSP 1876
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPS-YSP 1715
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPS-YSP 1736
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1853 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1913 SPT-YSP 1918
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPS-YSP 1694
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP ++P S YSP+
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1786
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1787 SPSYSPTSPS-YSP 1799
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP+Y+PTSP+YSP+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 1769 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1828
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 1829 SPSYSPTS-PKYTP 1841
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1650 YSPTSPSYSPTSPS-YSP 1666
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 1839 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 1894
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 1895 YSPTS-PVYTP 1904
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1961
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 1962 SPDDSDE 1968
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1577 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 1629
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1630 SPTSPN-YSP 1638
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 1562 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1618 TSPS-YSP 1624
[102][TOP]
>UniRef100_Q8SSC4 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Encephalitozoon
cuniculi RepID=RPB1_ENCCU
Length = 1599
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1473 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1532
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1533 SPS-YSP 1538
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1494 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1553
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1554 SPS-YSP 1559
Score = 95.1 bits (235), Expect = 3e-18
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YS S
Sbjct: 1515 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSVS 1574
Query: 388 STSQYTPKTNDNKD 347
+S + N+D
Sbjct: 1575 MSSFSNKNKSKNQD 1588
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1467 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1526
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1527 PS-YSP 1531
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1480 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1539
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1540 SPSYSPTSPS-YSP 1552
Score = 86.3 bits (212), Expect = 1e-15
Identities = 54/103 (52%), Positives = 64/103 (62%), Gaps = 14/103 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP---GY 398
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1501 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1560
Query: 397 SPS----------STSQYTPKTNDNKDDPGTK*ARLICLRDGS 299
SPS S S ++ K N +K+ G K R DGS
Sbjct: 1561 SPSYSPTSPSYSVSMSSFSNK-NKSKNQDGDKKRR----NDGS 1598
Score = 73.9 bits (180), Expect = 8e-12
Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 25/90 (27%)
Frame = -3
Query: 562 SPTSPSY------------------------SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 455
+P+S S+ SPTSPSYSP+SP+YSP+SP S TSP YS
Sbjct: 1436 TPSSDSFSISSGNWSPTHLEMAYSRDLGERLSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1495
Query: 454 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 368
P+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1496 PTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1524
[103][TOP]
>UniRef100_P11414 DNA-directed RNA polymerase II subunit RPB1 (Fragment) n=1
Tax=Cricetulus griseus RepID=RPB1_CRIGR
Length = 467
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 133 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 192
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 193 SPS-YSP 198
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 154 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 213
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 214 SPS-YSP 219
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 175 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 234
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 235 SPS-YSP 240
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 112 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 171
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 172 SPS-YSP 177
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P S YSP+ P YSP+
Sbjct: 210 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 269
Query: 388 STSQYTP 368
S + YTP
Sbjct: 270 SPN-YTP 275
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP S YSP+ P YSPS
Sbjct: 245 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 304
Query: 388 STSQYTPKT 362
S +YTP++
Sbjct: 305 S-PRYTPQS 312
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 182 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 241
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 242 SPN-YSP 247
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 196 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 255
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 256 SPS-YSP 261
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 203 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 262
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 263 SPS-YSP 268
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP S Y+P+ P YSPS
Sbjct: 287 YSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS 346
Query: 388 STSQYTP 368
S +YTP
Sbjct: 347 S-PEYTP 352
Score = 94.4 bits (233), Expect = 5e-18
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP S YSP+ P Y+P+
Sbjct: 217 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 276
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 277 SPN-YSP 282
Score = 94.4 bits (233), Expect = 5e-18
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP S YSPS P Y+P
Sbjct: 252 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 311
Query: 388 STSQYTPKT 362
S + YTP +
Sbjct: 312 SPT-YTPSS 319
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 105 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 164
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 165 SPS-YSP 170
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
YSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS+ Y+PS
Sbjct: 259 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 318
Query: 409 QPGYSPSSTSQYTP 368
P YSPSS S Y+P
Sbjct: 319 SPSYSPSSPS-YSP 331
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 371 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 430
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 431 SPKGSTYSP 439
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 322 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 380
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 381 TTPKYSP 387
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 329 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 388
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 389 SPT-YSP 394
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 357 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 416
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 417 S-PKYSP 422
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 385 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 444
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 445 SPTSPTYSLTSPAISPDD 462
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 308 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 367
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 368 S-PKYSP 373
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 140 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 199
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 200 SPSYSPTSPS-YSP 212
Score = 86.3 bits (212), Expect = 1e-15
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 161 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 220
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 221 SPSYSPTSPS-YSP 233
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 350 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 409
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 410 SPT-YSP 415
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 119 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 178
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 179 SPSYSPTSPS-YSP 191
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+SP ++P S YSP+
Sbjct: 224 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 283
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 284 SPSYSPTSPS-YSP 296
Score = 79.7 bits (195), Expect = 1e-13
Identities = 42/74 (56%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSP+Y+PTSP+YSP+SP +YSP+SP S +SP Y+P SP ++PS+ YSPS
Sbjct: 266 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 325
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S +YTP
Sbjct: 326 SPSYSPTS-PKYTP 338
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 16/78 (20%)
Frame = -3
Query: 553 SPSYSPT---------------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 422
SPSYSPT SPSYSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 87 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 146
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 147 YSPTSPSYSPTSPS-YSP 163
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 336 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 391
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 392 YSPTS-PVYTP 401
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 399 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 458
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 459 SPDDSDE 465
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P+SP Y P+ SPSYSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 74 PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGG------YTPQSPSYSPTSPSYSPTSPSY 126
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 127 SPTSPN-YSP 135
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP PSSPY SP YSP+SP + P + GY+P P YSP
Sbjct: 59 SPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 114
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 115 TSPS-YSP 121
[104][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
briggsae RepID=RPB1_CAEBR
Length = 1853
Score = 97.4 bits (241), Expect = 6e-19
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSPS
Sbjct: 1616 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1675
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1676 S-PRYSP 1681
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP++SP S YSP+ P YSP+
Sbjct: 1637 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPT 1696
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1697 SPT-YSP 1702
Score = 95.5 bits (236), Expect = 2e-18
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS+ YSP+ P YSP+
Sbjct: 1630 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPT 1689
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1690 SPT-YSP 1695
Score = 95.5 bits (236), Expect = 2e-18
Identities = 49/77 (63%), Positives = 56/77 (72%), Gaps = 11/77 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-----------GY 419
YSPTSPSYSPTSPSYSPSSP YSP+SP S TSP YSP+SP +SP++ GY
Sbjct: 1658 YSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGY 1717
Query: 418 SPSQPGYSPSSTSQYTP 368
SPS P YSPSS + Y+P
Sbjct: 1718 SPSSPKYSPSSPT-YSP 1733
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SP SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1610 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1669
Query: 385 TSQYTPKT 362
S Y+P +
Sbjct: 1670 PS-YSPSS 1676
Score = 93.2 bits (230), Expect = 1e-17
Identities = 47/70 (67%), Positives = 57/70 (81%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD---YSPSSPQFSPST-GYSPSQPGY 398
YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSPSSP++SPS+ YSP+ P Y
Sbjct: 1679 YSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSY 1738
Query: 397 SPSSTSQYTP 368
SP+S QY+P
Sbjct: 1739 SPTS-PQYSP 1747
Score = 92.4 bits (228), Expect = 2e-17
Identities = 49/70 (70%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
YSPTSP+YSPTSPSY SPSSP YSPSSP S TSP YSP+SPQ+SP S YSPS P Y
Sbjct: 1700 YSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTY 1759
Query: 397 SPSSTSQYTP 368
+PSS + Y P
Sbjct: 1760 TPSSPT-YNP 1768
Score = 91.3 bits (225), Expect = 5e-17
Identities = 51/88 (57%), Positives = 59/88 (67%), Gaps = 11/88 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP------SSPQFSP-STGYSPSQ 407
YSPTSPSYSPTSP YSP+SP YSPSSP + +SP Y+P SSPQ+SP S YSP+
Sbjct: 1731 YSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSPTSPTYSPTS 1790
Query: 406 PGYSPSSTSQYTPK----TNDNKDDPGT 335
P Y+PSS QY+P T D PGT
Sbjct: 1791 PSYTPSS-PQYSPTSPTYTPSPADQPGT 1817
Score = 90.9 bits (224), Expect = 6e-17
Identities = 47/75 (62%), Positives = 57/75 (76%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGY 398
YSPTSPSY SP+SP YSPSSPTYSP+SP S TSP YSP+SPQ+SPS+ Y+PS P Y
Sbjct: 1707 YSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTY 1766
Query: 397 SPS-----STSQYTP 368
+P+ S+ QY+P
Sbjct: 1767 NPTSPRAFSSPQYSP 1781
Score = 89.4 bits (220), Expect = 2e-16
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 11/77 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSP----------SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 419
YSPTSPSYSPTSP SYSP+SP+YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1592 YSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1651
Query: 418 SPSQPGYSPSSTSQYTP 368
SP+ P YSP+S S Y+P
Sbjct: 1652 SPTSPSYSPTSPS-YSP 1667
Score = 89.4 bits (220), Expect = 2e-16
Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 4/72 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT---YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
YSPTSP+YSPTSP+YSP+SP+ YSPSSP S +SP YSP+SP +SP S YSP+ P Y
Sbjct: 1693 YSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQY 1752
Query: 397 SPSSTSQYTPKT 362
SPSS + YTP +
Sbjct: 1753 SPSSPT-YTPSS 1763
Score = 88.2 bits (217), Expect = 4e-16
Identities = 43/68 (63%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSY+P+SP YSP+SPTY+PS GTS YSPSSP +SPS+ YSP+ P YSPS
Sbjct: 1786 YSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPTYSPASPSYSPS 1845
Query: 388 STSQYTPK 365
S + Y P+
Sbjct: 1846 SPT-YDPQ 1852
Score = 84.7 bits (208), Expect = 4e-15
Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 10/78 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSPSSP S TSP YSP+SP +SP S YSP+
Sbjct: 1644 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPT 1703
Query: 409 QPGYSPSSTSQ--YTPKT 362
P YSP+S S Y+P +
Sbjct: 1704 SPTYSPTSPSYEGYSPSS 1721
Score = 84.0 bits (206), Expect = 7e-15
Identities = 51/101 (50%), Positives = 56/101 (55%), Gaps = 35/101 (34%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YN-------------------SGTSPDYSPSS 446
YSPTSP YSPTSP YSPSSPTY+PSSP YN S TSP Y+PSS
Sbjct: 1738 YSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSPTSPTYSPTSPSYTPSS 1797
Query: 445 PQFSP---------------STGYSPSQPGYSPSSTSQYTP 368
PQ+SP S YSPS P YSPSS + Y+P
Sbjct: 1798 PQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPT-YSP 1837
Score = 82.0 bits (201), Expect = 3e-14
Identities = 41/70 (58%), Positives = 51/70 (72%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQFSP-STGYSPSQPGY 398
YSP SP +S TSP YSP+SP+YSP+SP + G SP YSP+SP +SP S YSP+ P Y
Sbjct: 1578 YSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSY 1637
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1638 SPTSPS-YSP 1646
Score = 62.8 bits (151), Expect = 2e-08
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSP-----SYSPTSPSYSPSSP-TYSPSSPYNSGTSPDYSPSSPQFSPST----GYS 416
+SP SP + SP +P+Y SP YSP+SP S TSP YSP+SP +SP++ G S
Sbjct: 1551 WSPASPGDPLGALSPRTPAYGGMSPGVYSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQS 1610
Query: 415 PSQPGYSPSSTSQYTP 368
P P YSP+S S Y+P
Sbjct: 1611 PVSPSYSPTSPS-YSP 1625
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/54 (51%), Positives = 34/54 (62%), Gaps = 14/54 (25%)
Frame = -3
Query: 565 YSPTSPSY--------------SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 446
YSPTSP+Y SP+SP+YSPSSPTYSP+SP S +SP Y P +
Sbjct: 1800 YSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPTYSPASPSYSPSSPTYDPQN 1853
[105][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3RM26_TRIAD
Length = 1784
Score = 97.1 bits (240), Expect = 8e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPT 1742
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1743 SPS-YSP 1748
Score = 96.7 bits (239), Expect = 1e-18
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1714
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1715 SPS-YSP 1720
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPT 1693
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1694 SPS-YSP 1699
Score = 95.1 bits (235), Expect = 3e-18
Identities = 47/67 (70%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1704 YSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPT 1763
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1764 SPS-YSP 1769
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1592 YSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPT 1651
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1652 S-PRYSP 1657
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1613 YSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPT 1672
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1673 S-PKYSP 1678
Score = 94.0 bits (232), Expect = 7e-18
Identities = 46/67 (68%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1627 YSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPT 1686
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1687 SPS-YSP 1692
Score = 93.6 bits (231), Expect = 9e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1676 YSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPT 1735
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1736 S-PRYSP 1741
Score = 91.3 bits (225), Expect = 5e-17
Identities = 42/60 (70%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1725 YSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPDYSPN 1784
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP YSP+SP++SP S YSP+
Sbjct: 1690 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPT 1749
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1750 SPRYSPTSPS-YSP 1762
Score = 85.1 bits (209), Expect = 3e-15
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 4/74 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP---GY 398
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP++SP S YSP+ P
Sbjct: 1711 YSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPT 1770
Query: 397 SPSSTSQYTPKTND 356
SPS Y+P + D
Sbjct: 1771 SPS----YSPTSPD 1780
Score = 84.3 bits (207), Expect = 6e-15
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP++SP S YSP+ P
Sbjct: 1641 YSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPT 1700
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1701 SPSYSPTSPS-YSP 1713
Score = 83.2 bits (204), Expect = 1e-14
Identities = 46/74 (62%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP-------SSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSPSYSPTSP YSP+SP YSP +SP S TSP YSP+SP +SP S YSP+
Sbjct: 1662 YSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1721
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1722 SPRYSPTSPS-YSP 1734
Score = 82.8 bits (203), Expect = 2e-14
Identities = 46/74 (62%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP-------SSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSPSYSP+SP YSP +SP S TSP YSP+SP +SP S YSP+
Sbjct: 1599 YSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPT 1658
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1659 SPSYSPTSPS-YSP 1671
[106][TOP]
>UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0XAQ9_CULQU
Length = 1874
Score = 97.1 bits (240), Expect = 8e-19
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T YSP+ P YSPS
Sbjct: 1661 YSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPS 1720
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1721 S-PHYSP 1726
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP+YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP+ Y+PS P YSP+S
Sbjct: 1586 YSPTSPNYSPTSPRYSPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSPTS 1645
Query: 385 -----TSQYTP 368
TS Y+P
Sbjct: 1646 PSYSPTSPYSP 1656
Score = 96.7 bits (239), Expect = 1e-18
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP Y+P++P S TSP+YSPSSP +SP S YSPS P YSP+
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPT 1741
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1742 SPS-YSP 1747
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/69 (65%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP+YSP+SP+YSPSSP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1654 YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPT 1713
Query: 388 STSQYTPKT 362
S + Y+P +
Sbjct: 1714 SPN-YSPSS 1721
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/69 (65%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSP+SPSYSP+SP+YSP+SP S TSP+Y+P++P +SP S YSPS P YSP+
Sbjct: 1668 YSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPT 1727
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1728 SPS-YSPSS 1735
Score = 91.7 bits (226), Expect = 4e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP+SPSYSPTSPSYSP+SP+YSP+SP + +P YSP+SP +SPS+ YSP+ P YSPS
Sbjct: 1675 YSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPS 1734
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1735 S-PKYSP 1740
Score = 90.1 bits (222), Expect = 1e-16
Identities = 46/75 (61%), Positives = 56/75 (74%), Gaps = 7/75 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 407
Y+P+SP+YSPTSPS YSP+SP+YSP+SP S TSP YSPSSP +SP S YSP+
Sbjct: 1634 YAPSSPAYSPTSPSYSPTSPYSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTS 1693
Query: 406 PGYSPSSTSQYTPKT 362
P YSP+S + YTP T
Sbjct: 1694 PSYSPTSPN-YTPAT 1707
Score = 89.7 bits (221), Expect = 1e-16
Identities = 41/66 (62%), Positives = 52/66 (78%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP+YSP+SP YSP+SP+YSPSSP S TSP YSP+SP + S Y+P+ P YSP+S
Sbjct: 1710 YSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASPQYSPTS 1769
Query: 385 TSQYTP 368
+Y+P
Sbjct: 1770 -PKYSP 1774
Score = 89.4 bits (220), Expect = 2e-16
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSP+SP YSP+SP+YSP+SP + G SP Y+P+SPQ+SP S YSP+ P YSPS
Sbjct: 1724 YSPTSPSYSPSSPKYSPTSPSYSPTSP-SYGGSPQYTPASPQYSPTSPKYSPTSPSYSPS 1782
Query: 388 STSQYTP 368
S Q++P
Sbjct: 1783 S-PQHSP 1788
Score = 87.8 bits (216), Expect = 5e-16
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPT------SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 407
YSPTSP YSPT SP+YSP+SP+YSP+SPY S TSP YSP+SP +SP S YSPS
Sbjct: 1621 YSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPY-SPTSPSYSPTSPAYSPTSPSYSPSS 1679
Query: 406 PGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1680 PSYSPTSPS-YSP 1691
Score = 87.8 bits (216), Expect = 5e-16
Identities = 45/83 (54%), Positives = 54/83 (65%), Gaps = 8/83 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPS 410
YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSPSSP +SP S YSP+
Sbjct: 1641 YSPTSPSYSPTSP-YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPT 1699
Query: 409 QPGYSPSSTSQYTPKTNDNKDDP 341
P Y+P++ S N + P
Sbjct: 1700 SPNYTPATPSYSPTSPNYSPSSP 1722
Score = 86.7 bits (213), Expect = 1e-15
Identities = 43/68 (63%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPS- 389
YSPTSP+Y+P +PSYSP+SP YSPSSP+ S TSP YSPSSP++SP+ SPS SPS
Sbjct: 1696 YSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPT---SPSYSPTSPSY 1752
Query: 388 -STSQYTP 368
+ QYTP
Sbjct: 1753 GGSPQYTP 1760
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/65 (63%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP S YSP+ P YSP++T
Sbjct: 1576 SPGYSPTSPSYSPTSPNYSPTSPRYSPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTAT-- 1633
Query: 376 YTPKT 362
Y P +
Sbjct: 1634 YAPSS 1638
Score = 82.4 bits (202), Expect = 2e-14
Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 9/87 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---STGYSP 413
YSPTSPSYSPTSPSY +P+SP YSP+SP S TSP YSPSSPQ SP + +
Sbjct: 1738 YSPTSPSYSPTSPSYGGSPQYTPASPQYSPTSPKYSPTSPSYSPSSPQHSPGSSGSNFMV 1797
Query: 412 SQPGYSPSSTSQYTPKTNDNKDDPGTK 332
+ P YSP +T++Y+P N + PG++
Sbjct: 1798 NSPTYSP-TTARYSP--NMSSYSPGSQ 1821
Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSPSYSP+SP+Y SP + SP YSP+SP++SP S YSPS P +SP
Sbjct: 1731 YSPSSPKYSPTSPSYSPTSPSYG-GSPQYTPASPQYSPTSPKYSPTSPSYSPSSPQHSPG 1789
Query: 388 ST 383
S+
Sbjct: 1790 SS 1791
Score = 76.6 bits (187), Expect = 1e-12
Identities = 42/78 (53%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPG---Y 398
YSPT+ YSP SYSP S YSP+SP + TSP YSPSSP +SP+ GYSPS P Y
Sbjct: 1802 YSPTTARYSPNMSSYSPGSQKYSPTSPVYTPTSPHYSPSSPAYSPTGQGYSPSSPASPTY 1861
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S P D+ DD
Sbjct: 1862 SPTS-----PSYEDSVDD 1874
Score = 75.1 bits (183), Expect = 3e-12
Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPT-----YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
SPSYSP+SP+Y+ +SP YSP+SP S TSP+YSP+SP++SP S YSP+ P YSP
Sbjct: 1557 SPSYSPSSPNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPNYSPTSPNYSP 1616
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1617 TSPS-YSP 1623
Score = 69.7 bits (169), Expect = 1e-10
Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SP PS SPSYSPSSP Y+ +SP G SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1547 SPYFPSSPSASPSYSPSSPNYAAASP--GGASPGYSPTSPSYSPTSPNYSPTSPRYSPTS 1604
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1605 PN-YSP 1609
Score = 57.8 bits (138), Expect = 6e-07
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS------PSTGYSPSQPG 401
S SPS+SP S S P+ SP P + SP YSPSSP ++ S GYSP+ P
Sbjct: 1526 SGMSPSWSPMPGSPSSPGPSMSPYFPSSPSASPSYSPSSPNYAAASPGGASPGYSPTSPS 1585
Query: 400 YSPSSTSQYTP 368
YSP+S + Y+P
Sbjct: 1586 YSPTSPN-YSP 1595
[107][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
Length = 2085
Score = 96.7 bits (239), Expect = 1e-18
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+S +SP S YSP+ PGYSP+
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPT 1760
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1761 SPS-YSPSS 1768
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/73 (58%), Positives = 52/73 (71%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-------GYSPSQ 407
YSPTSPSYSPTS +YSP+SP YSP+SP S TSP YSPSSP ++PS+ YSPS
Sbjct: 1729 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSS 1788
Query: 406 PGYSPSSTSQYTP 368
P Y S++ Y+P
Sbjct: 1789 PNYYSSTSPTYSP 1801
Score = 87.4 bits (215), Expect = 7e-16
Identities = 47/71 (66%), Positives = 55/71 (77%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYS--PTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 401
YSPTSPSYS PTSPSYSP+SP+Y SP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1676 YSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1735
Query: 400 YSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1736 YSPTS-SAYSP 1745
Score = 86.7 bits (213), Expect = 1e-15
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP---GY 398
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TS YSP+SP +SP S GYSP+ P
Sbjct: 1708 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPS 1767
Query: 397 SPS---STSQYTP 368
SPS S+ +YTP
Sbjct: 1768 SPSYNPSSVKYTP 1780
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/70 (60%), Positives = 51/70 (72%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF---SPSTGYSPSQPGYS 395
YSP+SP YSPTS SYSP+SP YSP+SP + TS YSP+SP + SPS YSP+ P YS
Sbjct: 1618 YSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYS 1677
Query: 394 PSSTS-QYTP 368
P+S S Y+P
Sbjct: 1678 PTSPSYSYSP 1687
Score = 82.8 bits (203), Expect = 2e-14
Identities = 48/90 (53%), Positives = 59/90 (65%), Gaps = 21/90 (23%)
Frame = -3
Query: 565 YSPTSPSYSPTSP--SYSPSSPTYSPSSP-----------------YN-SGTSPDYSPSS 446
YSPTSPSY+PTSP SYSP+SP+YSP+SP YN S TSP YSP+S
Sbjct: 1653 YSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTS 1712
Query: 445 PQFSP-STGYSPSQPGYSPSSTSQYTPKTN 359
P +SP S YSP+ P YSP+S S Y+P ++
Sbjct: 1713 PSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1741
Score = 80.9 bits (198), Expect = 6e-14
Identities = 41/68 (60%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SPTSP YS TSP YSPSSP YSP+S S TSP YSP+SP ++P S+ YSP+ P Y+P+
Sbjct: 1604 HSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPT 1663
Query: 388 STS-QYTP 368
S S Y+P
Sbjct: 1664 SPSYSYSP 1671
Score = 80.9 bits (198), Expect = 6e-14
Identities = 42/79 (53%), Positives = 51/79 (64%), Gaps = 13/79 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF------------SPSTG 422
YSPTS SYSPTSP YSP+SP Y+P+S S TSP Y+P+SP + SPS
Sbjct: 1625 YSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYS 1684
Query: 421 YSPSQPGYSPSSTS-QYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYNYSP 1703
Score = 79.7 bits (195), Expect = 1e-13
Identities = 43/73 (58%), Positives = 54/73 (73%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP--DYSPSSPQF---SPSTGYSPSQ 407
Y+PTS +YSPTSPSY+P+SP +YSP+SP S TSP YSP+SP + SPS YSP+
Sbjct: 1646 YNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTS 1705
Query: 406 PGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1706 PSYSPTSPS-YSP 1717
Score = 78.6 bits (192), Expect = 3e-13
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGT-----SPDYSPSSPQFSPSTG--YSPS 410
YSPTSP+YSPTSP YSP+SP+YSPSSP YN + S YSPSSP + ST YSP+
Sbjct: 1743 YSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPT 1802
Query: 409 QPGYSPSSTSQYTP 368
P YS S S Y+P
Sbjct: 1803 SPSYSQPSPS-YSP 1815
Score = 72.4 bits (176), Expect = 2e-11
Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 8/61 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPS------SPTYSPSSP-YNSGTSPDYSPSSPQFS-PSTGYSPS 410
YSPTSPSYSP+SPSY+PS S YSPSSP Y S TSP YSP+SP +S PS YSP+
Sbjct: 1757 YSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSPT 1816
Query: 409 Q 407
+
Sbjct: 1817 R 1817
Score = 69.7 bits (169), Expect = 1e-10
Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 16/82 (19%)
Frame = -3
Query: 565 YSPTSPSYSP--------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP------- 431
Y+P SP YSP TSPSY P+S +SP+SP S TSP YSPSSP +SP
Sbjct: 1575 YNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSP 1634
Query: 430 -STGYSPSQPGYSPSSTSQYTP 368
S YSP+ P Y+P+S S Y+P
Sbjct: 1635 TSPVYSPTSPVYNPTS-SAYSP 1655
Score = 65.5 bits (158), Expect = 3e-09
Identities = 35/69 (50%), Positives = 39/69 (56%), Gaps = 21/69 (30%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSS---------------------PYNSGTSPDYSPS 449
YSPTSP YSPTSPSYSPSSP+Y+PSS P S TSP YS
Sbjct: 1750 YSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQP 1809
Query: 448 SPQFSPSTG 422
SP +SP+ G
Sbjct: 1810 SPSYSPTRG 1818
[108][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q5WMZ9_ORYSJ
Length = 1741
Score = 96.7 bits (239), Expect = 1e-18
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+S +SP S YSP+ PGYSP+
Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPT 1707
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1708 SPS-YSPSS 1715
Score = 87.4 bits (215), Expect = 7e-16
Identities = 47/71 (66%), Positives = 55/71 (77%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYS--PTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 401
YSPTSPSYS PTSPSYSP+SP+Y SP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1623 YSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1682
Query: 400 YSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1683 YSPTS-SAYSP 1692
Score = 87.0 bits (214), Expect = 9e-16
Identities = 44/66 (66%), Positives = 49/66 (74%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSPSYSPTSPSYSP+S YSP+SP S TSP YSP+SP YSPS P Y+PSS
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSP------SYSPSSPSYNPSS 1722
Query: 385 TSQYTP 368
+YTP
Sbjct: 1723 V-KYTP 1727
Score = 86.3 bits (212), Expect = 1e-15
Identities = 43/65 (66%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSPSYSPTS +YSP+SP YSP+SP S TSP YSPSSP ++PS+ Y+PS YSPS
Sbjct: 1676 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSH-AYSPS 1734
Query: 388 STSQY 374
S + Y
Sbjct: 1735 SPNYY 1739
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/70 (60%), Positives = 51/70 (72%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF---SPSTGYSPSQPGYS 395
YSP+SP YSPTS SYSP+SP YSP+SP + TS YSP+SP + SPS YSP+ P YS
Sbjct: 1565 YSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYS 1624
Query: 394 PSSTS-QYTP 368
P+S S Y+P
Sbjct: 1625 PTSPSYSYSP 1634
Score = 82.8 bits (203), Expect = 2e-14
Identities = 48/90 (53%), Positives = 59/90 (65%), Gaps = 21/90 (23%)
Frame = -3
Query: 565 YSPTSPSYSPTSP--SYSPSSPTYSPSSP-----------------YN-SGTSPDYSPSS 446
YSPTSPSY+PTSP SYSP+SP+YSP+SP YN S TSP YSP+S
Sbjct: 1600 YSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTS 1659
Query: 445 PQFSP-STGYSPSQPGYSPSSTSQYTPKTN 359
P +SP S YSP+ P YSP+S S Y+P ++
Sbjct: 1660 PSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1688
Score = 80.9 bits (198), Expect = 6e-14
Identities = 41/68 (60%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SPTSP YS TSP YSPSSP YSP+S S TSP YSP+SP ++P S+ YSP+ P Y+P+
Sbjct: 1551 HSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPT 1610
Query: 388 STS-QYTP 368
S S Y+P
Sbjct: 1611 SPSYSYSP 1618
Score = 80.9 bits (198), Expect = 6e-14
Identities = 42/79 (53%), Positives = 51/79 (64%), Gaps = 13/79 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF------------SPSTG 422
YSPTS SYSPTSP YSP+SP Y+P+S S TSP Y+P+SP + SPS
Sbjct: 1572 YSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYS 1631
Query: 421 YSPSQPGYSPSSTS-QYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1632 YSPTSPSYSPTSPSYNYSP 1650
Score = 79.7 bits (195), Expect = 1e-13
Identities = 43/73 (58%), Positives = 54/73 (73%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP--DYSPSSPQF---SPSTGYSPSQ 407
Y+PTS +YSPTSPSY+P+SP +YSP+SP S TSP YSP+SP + SPS YSP+
Sbjct: 1593 YNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTS 1652
Query: 406 PGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1653 PSYSPTSPS-YSP 1664
Score = 69.7 bits (169), Expect = 1e-10
Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 16/82 (19%)
Frame = -3
Query: 565 YSPTSPSYSP--------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP------- 431
Y+P SP YSP TSPSY P+S +SP+SP S TSP YSPSSP +SP
Sbjct: 1522 YNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSP 1581
Query: 430 -STGYSPSQPGYSPSSTSQYTP 368
S YSP+ P Y+P+S S Y+P
Sbjct: 1582 TSPVYSPTSPVYNPTS-SAYSP 1602
[109][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DKN9_ORYSJ
Length = 1834
Score = 96.7 bits (239), Expect = 1e-18
Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+S +SP S YSP+ PGYSP+
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPT 1760
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1761 SPS-YSPSS 1768
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/73 (58%), Positives = 52/73 (71%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-------GYSPSQ 407
YSPTSPSYSPTS +YSP+SP YSP+SP S TSP YSPSSP ++PS+ YSPS
Sbjct: 1729 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSS 1788
Query: 406 PGYSPSSTSQYTP 368
P Y S++ Y+P
Sbjct: 1789 PNYYSSTSPTYSP 1801
Score = 87.4 bits (215), Expect = 7e-16
Identities = 47/71 (66%), Positives = 55/71 (77%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYS--PTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 401
YSPTSPSYS PTSPSYSP+SP+Y SP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1676 YSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1735
Query: 400 YSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1736 YSPTS-SAYSP 1745
Score = 86.7 bits (213), Expect = 1e-15
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP---GY 398
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TS YSP+SP +SP S GYSP+ P
Sbjct: 1708 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPS 1767
Query: 397 SPS---STSQYTP 368
SPS S+ +YTP
Sbjct: 1768 SPSYNPSSVKYTP 1780
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/70 (60%), Positives = 51/70 (72%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF---SPSTGYSPSQPGYS 395
YSP+SP YSPTS SYSP+SP YSP+SP + TS YSP+SP + SPS YSP+ P YS
Sbjct: 1618 YSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYS 1677
Query: 394 PSSTS-QYTP 368
P+S S Y+P
Sbjct: 1678 PTSPSYSYSP 1687
Score = 82.8 bits (203), Expect = 2e-14
Identities = 48/90 (53%), Positives = 59/90 (65%), Gaps = 21/90 (23%)
Frame = -3
Query: 565 YSPTSPSYSPTSP--SYSPSSPTYSPSSP-----------------YN-SGTSPDYSPSS 446
YSPTSPSY+PTSP SYSP+SP+YSP+SP YN S TSP YSP+S
Sbjct: 1653 YSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTS 1712
Query: 445 PQFSP-STGYSPSQPGYSPSSTSQYTPKTN 359
P +SP S YSP+ P YSP+S S Y+P ++
Sbjct: 1713 PSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1741
Score = 80.9 bits (198), Expect = 6e-14
Identities = 41/68 (60%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+SPTSP YS TSP YSPSSP YSP+S S TSP YSP+SP ++P S+ YSP+ P Y+P+
Sbjct: 1604 HSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPT 1663
Query: 388 STS-QYTP 368
S S Y+P
Sbjct: 1664 SPSYSYSP 1671
Score = 80.9 bits (198), Expect = 6e-14
Identities = 42/79 (53%), Positives = 51/79 (64%), Gaps = 13/79 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF------------SPSTG 422
YSPTS SYSPTSP YSP+SP Y+P+S S TSP Y+P+SP + SPS
Sbjct: 1625 YSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYS 1684
Query: 421 YSPSQPGYSPSSTS-QYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1685 YSPTSPSYSPTSPSYNYSP 1703
Score = 79.7 bits (195), Expect = 1e-13
Identities = 43/73 (58%), Positives = 54/73 (73%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP--DYSPSSPQF---SPSTGYSPSQ 407
Y+PTS +YSPTSPSY+P+SP +YSP+SP S TSP YSP+SP + SPS YSP+
Sbjct: 1646 YNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTS 1705
Query: 406 PGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1706 PSYSPTSPS-YSP 1717
Score = 73.6 bits (179), Expect = 1e-11
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSP+SPSY+PSS Y+PS Y+ + YS +SP +SP S YS P YSP+
Sbjct: 1757 YSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSPT 1816
Query: 388 STSQYTPKTNDNKDDP 341
S + +++P
Sbjct: 1817 SRVEEEAHEEAEEEEP 1832
Score = 69.7 bits (169), Expect = 1e-10
Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 16/82 (19%)
Frame = -3
Query: 565 YSPTSPSYSP--------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP------- 431
Y+P SP YSP TSPSY P+S +SP+SP S TSP YSPSSP +SP
Sbjct: 1575 YNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSP 1634
Query: 430 -STGYSPSQPGYSPSSTSQYTP 368
S YSP+ P Y+P+S S Y+P
Sbjct: 1635 TSPVYSPTSPVYNPTS-SAYSP 1655
[110][TOP]
>UniRef100_Q5CUJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cryptosporidium parvum
Iowa II RepID=Q5CUJ2_CRYPV
Length = 1902
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/80 (56%), Positives = 60/80 (75%), Gaps = 4/80 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP YSPTSP YSPSSP YSP+SP S TSP+Y+P+SP +SP++ YSP+ P Y+P+S
Sbjct: 1780 YSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTS 1839
Query: 385 TSQYTPKT----NDNKDDPG 338
+ Y+P + ++N PG
Sbjct: 1840 PN-YSPSSPNYISNNSGSPG 1858
Score = 94.0 bits (232), Expect = 7e-18
Identities = 49/77 (63%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSPS P YSP+
Sbjct: 1745 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPT 1804
Query: 388 STSQYTPKT-NDNKDDP 341
S QY+P + N N P
Sbjct: 1805 S-PQYSPTSPNYNPASP 1820
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1731 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1790
Query: 388 STSQYTPKT 362
S Y+P +
Sbjct: 1791 S-PHYSPSS 1798
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1689 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1748
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1749 S-PHYSP 1754
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1696 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1755
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1756 S-PHYSP 1761
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1703 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1762
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1763 S-PHYSP 1768
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1710 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1769
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1770 S-PHYSP 1775
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1717 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1776
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1777 S-PHYSP 1782
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1724 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1783
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1784 S-PHYSP 1789
Score = 87.8 bits (216), Expect = 5e-16
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1683 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1742
Query: 385 TSQYTP 368
Y+P
Sbjct: 1743 -PHYSP 1747
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 9/84 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP YS P+SP YSP+SP+ S +SP YSP+SPQ+SP S Y+P+
Sbjct: 1759 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPA 1818
Query: 409 QPGYSPSSTSQYTPKT-NDNKDDP 341
P YSP TS Y+P + N N P
Sbjct: 1819 SPNYSP--TSHYSPTSPNYNPTSP 1840
Score = 79.7 bits (195), Expect = 1e-13
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP------YNSGTSPDYSPSSPQFSPST----GYS 416
YSP+SP YSPTSP YSP+SP Y+P+SP + S TSP+Y+P+SP +SPS+ +
Sbjct: 1794 YSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPNYSPSSPNYISNN 1853
Query: 415 PSQPGYSPSSTSQYTP 368
PGYSPSS QY P
Sbjct: 1854 SGSPGYSPSS-PQYDP 1868
Score = 79.3 bits (194), Expect = 2e-13
Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
S SP SPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1676 SNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1735
Query: 385 TSQYTP 368
Y+P
Sbjct: 1736 -PHYSP 1740
Score = 68.2 bits (165), Expect = 4e-10
Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+Y+PTSP+YSPSSP Y + NSG SP YSPSSPQ+ P + P P YS
Sbjct: 1828 YSPTSPNYNPTSPNYSPSSPNYISN---NSG-SPGYSPSSPQYDPIAVASVPRSPSYSVG 1883
Query: 388 S--TSQYTPKT 362
++Y+P +
Sbjct: 1884 KMVDAEYSPSS 1894
Score = 64.7 bits (156), Expect = 5e-09
Identities = 44/98 (44%), Positives = 51/98 (52%), Gaps = 32/98 (32%)
Frame = -3
Query: 565 YSPTSPS-----YSPTSPSYSPSSPT---------------------YSPSSPYN----- 479
YSP SPS Y+PTSP Y+ SSPT YSPSSP N
Sbjct: 1616 YSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKYKVNNTLSSYSPSSPLNSDNKI 1675
Query: 478 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 368
S SPD SP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1676 SNISPDLSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1712
[111][TOP]
>UniRef100_Q5CH45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
RepID=Q5CH45_CRYHO
Length = 1895
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/80 (56%), Positives = 60/80 (75%), Gaps = 4/80 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP YSPTSP YSPSSP YSP+SP S TSP+Y+P+SP +SP++ YSP+ P Y+P+S
Sbjct: 1773 YSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTS 1832
Query: 385 TSQYTPKT----NDNKDDPG 338
+ Y+P + ++N PG
Sbjct: 1833 PN-YSPSSPNYISNNSGSPG 1851
Score = 94.0 bits (232), Expect = 7e-18
Identities = 49/77 (63%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSPS P YSP+
Sbjct: 1738 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPT 1797
Query: 388 STSQYTPKT-NDNKDDP 341
S QY+P + N N P
Sbjct: 1798 S-PQYSPTSPNYNPASP 1813
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1724 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1783
Query: 388 STSQYTPKT 362
S Y+P +
Sbjct: 1784 S-PHYSPSS 1791
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1682 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1741
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1742 S-PHYSP 1747
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1689 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1748
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1749 S-PHYSP 1754
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1696 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1755
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1756 S-PHYSP 1761
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1703 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1762
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1763 S-PHYSP 1768
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1710 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1769
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1770 S-PHYSP 1775
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1717 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1776
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1777 S-PHYSP 1782
Score = 87.8 bits (216), Expect = 5e-16
Identities = 43/66 (65%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1676 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1735
Query: 385 TSQYTP 368
Y+P
Sbjct: 1736 -PHYSP 1740
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 9/84 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP YS P+SP YSP+SP+ S +SP YSP+SPQ+SP S Y+P+
Sbjct: 1752 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPA 1811
Query: 409 QPGYSPSSTSQYTPKT-NDNKDDP 341
P YSP TS Y+P + N N P
Sbjct: 1812 SPNYSP--TSHYSPTSPNYNPTSP 1833
Score = 79.7 bits (195), Expect = 1e-13
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP------YNSGTSPDYSPSSPQFSPST----GYS 416
YSP+SP YSPTSP YSP+SP Y+P+SP + S TSP+Y+P+SP +SPS+ +
Sbjct: 1787 YSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPNYSPSSPNYISNN 1846
Query: 415 PSQPGYSPSSTSQYTP 368
PGYSPSS QY P
Sbjct: 1847 SGSPGYSPSS-PQYDP 1861
Score = 79.3 bits (194), Expect = 2e-13
Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
S SP SPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1669 SNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1728
Query: 385 TSQYTP 368
Y+P
Sbjct: 1729 -PHYSP 1733
Score = 68.2 bits (165), Expect = 4e-10
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYS-PSQPGYSPS 389
YSPTSP+Y+PTSP+YSPSSP Y + NSG SP YSPSSPQ+ P S P P YS
Sbjct: 1821 YSPTSPNYNPTSPNYSPSSPNYISN---NSG-SPGYSPSSPQYDPIAVTSVPRSPSYSVG 1876
Query: 388 S--TSQYTPKT 362
++Y+P +
Sbjct: 1877 KMVDAEYSPSS 1887
Score = 64.7 bits (156), Expect = 5e-09
Identities = 44/98 (44%), Positives = 51/98 (52%), Gaps = 32/98 (32%)
Frame = -3
Query: 565 YSPTSPS-----YSPTSPSYSPSSPT---------------------YSPSSPYN----- 479
YSP SPS Y+PTSP Y+ SSPT YSPSSP N
Sbjct: 1609 YSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKYKVNNTLSSYSPSSPLNSDNKI 1668
Query: 478 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 368
S SPD SP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1669 SNISPDLSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1705
[112][TOP]
>UniRef100_B6AG69 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AG69_9CRYT
Length = 1927
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP YSP+SP YSP+SP+ S TSP+YSP+SP +SP S YSPS P YSP+
Sbjct: 1748 YSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPT 1807
Query: 388 STSQYTPKTNDNKDDP 341
S S N + P
Sbjct: 1808 SPSYNPASPNYSPSSP 1823
Score = 95.5 bits (236), Expect = 2e-18
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP YSP+SP YSP+SP+ S TSP+YSPSSP +SP S Y+P+ P YSPS
Sbjct: 1762 YSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPS 1821
Query: 388 STSQYTPKTNDNKDDP 341
S N + P
Sbjct: 1822 SPHYNPASPNYSPSSP 1837
Score = 95.5 bits (236), Expect = 2e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSPTSP+YSPTSP YSP+SP YSPSSP+ S TSP Y+P+SP +SPS+ Y+P+ P YSPS
Sbjct: 1776 YSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPSSPHYNPASPNYSPS 1835
Query: 388 STSQYTP 368
S QY P
Sbjct: 1836 S-PQYNP 1841
Score = 93.6 bits (231), Expect = 9e-18
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1699 YSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPT 1758
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1759 S-PHYSP 1764
Score = 93.6 bits (231), Expect = 9e-18
Identities = 44/69 (63%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP+YSP+SP +SP S YSP+ P YSP+
Sbjct: 1734 YSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPT 1793
Query: 388 STSQYTPKT 362
S + Y+P +
Sbjct: 1794 SPN-YSPSS 1801
Score = 93.2 bits (230), Expect = 1e-17
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1706 YSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPT 1765
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1766 SPN-YSP 1771
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 7/82 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSP+SP YSPTSPSY+P+SP YSPSSP+ + SP+YSPSSPQ++P+ YSPS P Y+P+
Sbjct: 1797 YSPSSPHYSPTSPSYNPASPNYSPSSPHYNPASPNYSPSSPQYNPALPNYSPSSPQYNPT 1856
Query: 388 STSQYTPK------TNDNKDDP 341
S + Y+P +N N D P
Sbjct: 1857 SPN-YSPSSPNYVLSNGNIDSP 1877
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP+YSP+SP +SP S YSP+ P YSP+
Sbjct: 1720 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPT 1779
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1780 SPN-YSP 1785
Score = 92.0 bits (227), Expect = 3e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1713 YSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPT 1772
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1773 S-PHYSP 1778
Score = 91.7 bits (226), Expect = 4e-17
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSPS
Sbjct: 1741 YSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPS 1800
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1801 S-PHYSP 1806
Score = 89.7 bits (221), Expect = 1e-16
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1727 YSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPT 1786
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1787 S-PHYSP 1792
Score = 85.1 bits (209), Expect = 3e-15
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSST 383
P SP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1694 PLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1753
Query: 382 SQYTP 368
+ Y+P
Sbjct: 1754 N-YSP 1757
Score = 82.0 bits (201), Expect = 3e-14
Identities = 40/66 (60%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SPTSP P SP+YSP+SP YSP+SP S TSP+YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1686 SPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTS 1745
Query: 385 TSQYTP 368
Y+P
Sbjct: 1746 -PHYSP 1750
Score = 75.5 bits (184), Expect = 3e-12
Identities = 42/80 (52%), Positives = 49/80 (61%), Gaps = 14/80 (17%)
Frame = -3
Query: 565 YSPTSPSYS-------------PTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 428
YSPTSP YS PTSP P SP YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1665 YSPTSPVYSGDKDGDSSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTS 1724
Query: 427 TGYSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S Y+P
Sbjct: 1725 PHYSPTSPHYSPTS-PHYSP 1743
Score = 61.6 bits (148), Expect = 4e-08
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 12/80 (15%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY------------SPSSPYNSGTSPDYSPSSPQFSPSTG 422
YSP+SP Y+PTSP+YSPSSP Y SPSSP+ + Y P+SP ++ ST
Sbjct: 1846 YSPSSPQYNPTSPNYSPSSPNYVLSNGNIDSPQYSPSSPHYDQSVAAYHPTSPSYT-STN 1904
Query: 421 YSPSQPGYSPSSTSQYTPKT 362
+ + YSP+S T K+
Sbjct: 1905 MAAEEAEYSPTSPLGGTTKS 1924
Score = 54.7 bits (130), Expect = 5e-06
Identities = 40/109 (36%), Positives = 49/109 (44%), Gaps = 44/109 (40%)
Frame = -3
Query: 562 SPTSP--SYSPTSPSYSPSSPTY---------------------SPSSPYNSG------- 473
SPTSP Y+PTSP Y+ SP Y SP+SP SG
Sbjct: 1622 SPTSPLIDYTPTSPIYAVRSPAYGHETEERTKKRYKANIATSAYSPTSPVYSGDKDGDSS 1681
Query: 472 -------------TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 368
SP+YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1682 SPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTS-PHYSP 1729
[113][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S3M0_OSTLU
Length = 1646
Score = 96.3 bits (238), Expect = 1e-18
Identities = 45/75 (60%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1572 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1631
Query: 388 STSQYTPKTNDNKDD 344
S + Y+PK + ++
Sbjct: 1632 SPA-YSPKEEEENEE 1645
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1523 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1582
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1583 SPA-YSP 1588
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1544 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1603
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1604 SPA-YSP 1609
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1530 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1589
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1590 SPAYSPTSPA-YSP 1602
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1551 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1610
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1611 SPAYSPTSPA-YSP 1623
[114][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
macrandra RepID=Q9C428_9FUNG
Length = 1603
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSY+P+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1538 YSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1598 SPS-YSP 1603
Score = 92.0 bits (227), Expect = 3e-17
Identities = 44/66 (66%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SPTSP YSPTSPSYSP+SP+Y+P+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1532 SPTSPGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1591
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1592 PS-YSP 1596
[115][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 95.9 bits (237), Expect = 2e-18
Identities = 45/61 (73%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP+SP YSP+SP YSPSSP YSPSSP+ S +SP YSPSSPQ+SPS+ YSPS P YSPS
Sbjct: 1679 YSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPS 1738
Query: 388 S 386
S
Sbjct: 1739 S 1739
Score = 95.5 bits (236), Expect = 2e-18
Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 11/79 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-----------GY 419
YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SPS+ Y
Sbjct: 1620 YSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSY 1679
Query: 418 SPSQPGYSPSSTSQYTPKT 362
SPS P YSPSS QY+P +
Sbjct: 1680 SPSSPHYSPSS-PQYSPSS 1697
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/61 (73%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSPS
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPS 1665
Query: 388 S 386
S
Sbjct: 1666 S 1666
Score = 92.4 bits (228), Expect = 2e-17
Identities = 45/69 (65%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1599 YSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPT 1658
Query: 388 STSQYTPKT 362
S Y+P +
Sbjct: 1659 S-PMYSPSS 1666
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 11/79 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP----------TYSPSSPYNSGTSPDYSPSSPQFSPST-GY 419
YSPTSP+YSPTSP YSPSSP +YSPSSP+ S +SP YSPSSP +SPS+ Y
Sbjct: 1648 YSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSPHY 1707
Query: 418 SPSQPGYSPSSTSQYTPKT 362
SPS P YSPSS QY+P +
Sbjct: 1708 SPSSPQYSPSS-PQYSPSS 1725
Score = 90.9 bits (224), Expect = 6e-17
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 11/79 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP----------YNSGTSPDYSPSSPQFSPST-GY 419
YSPTSP+YSPTSP+YSP+SP YSPSSP S +SP YSPSSPQ+SPS+ Y
Sbjct: 1641 YSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHY 1700
Query: 418 SPSQPGYSPSSTSQYTPKT 362
SPS P YSPSS QY+P +
Sbjct: 1701 SPSSPHYSPSS-PQYSPSS 1718
Score = 90.1 bits (222), Expect = 1e-16
Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 11/79 (13%)
Frame = -3
Query: 565 YSPTSP----------SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GY 419
YSP+SP SYSP+SP YSPSSP YSPSSP+ S +SP YSPSSPQ+SPS+ Y
Sbjct: 1662 YSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQY 1721
Query: 418 SPSQPGYSPSSTSQYTPKT 362
SPS P YSPSS + Y+P +
Sbjct: 1722 SPSSPAYSPSSPA-YSPSS 1739
Score = 82.0 bits (201), Expect = 3e-14
Identities = 40/63 (63%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S +
Sbjct: 1596 SPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPT- 1654
Query: 376 YTP 368
Y+P
Sbjct: 1655 YSP 1657
Score = 78.2 bits (191), Expect = 4e-13
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SP+SP SP YSP+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1586 SPSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTS 1645
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1646 PT-YSP 1650
Score = 77.4 bits (189), Expect = 7e-13
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPS 410
YSP+SP YSP+SP YSPSSP YSPSSP S +SP YSPSSP +SPS+ PS
Sbjct: 1693 YSPSSPHYSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPSSPAHPS 1744
Score = 56.2 bits (134), Expect = 2e-06
Identities = 34/67 (50%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SPS SP +SP YSP TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1582 YSPRSPS----SPGGVAASPGYSP-------TSPTYSPTSPSYSPTSPSYSPTSPAYSPT 1630
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1631 SPA-YSP 1636
Score = 54.7 bits (130), Expect = 5e-06
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT 470
YSP+SP YSP+SP+YSPSSP YSPSSP + T
Sbjct: 1714 YSPSSPQYSPSSPAYSPSSPAYSPSSPAHPST 1745
Score = 54.3 bits (129), Expect = 6e-06
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 16/81 (19%)
Frame = -3
Query: 562 SPTSPSY--------SPTSPSYSPSSPT----YSPSSPYNSG---TSPDYSPSSPQFSP- 431
+PTSP+Y SP + SP S YSP SP + G SP YSP+SP +SP
Sbjct: 1550 TPTSPAYASPYGTAASPFNAMASPYSRAGNAFYSPRSPSSPGGVAASPGYSPTSPTYSPT 1609
Query: 430 STGYSPSQPGYSPSSTSQYTP 368
S YSP+ P YSP+S + Y+P
Sbjct: 1610 SPSYSPTSPSYSPTSPA-YSP 1629
[116][TOP]
>UniRef100_C5LSN8 P35 antigen, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5LSN8_9ALVE
Length = 170
Score = 95.9 bits (237), Expect = 2e-18
Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPS 410
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 71 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPT 130
Query: 409 QPGYSPSSTSQYTPKTNDNKDDP 341
P YSP+S + Y P + + P
Sbjct: 131 SPAYSPTSPAYYHPLVTSSDEGP 153
Score = 93.6 bits (231), Expect = 9e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 43 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 102
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 103 SPS-YSP 108
Score = 92.8 bits (229), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 64 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPT 123
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 124 SPA-YSP 129
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 60
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 61 SPA-YSP 66
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 22 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 81
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 82 SPA-YSP 87
Score = 82.8 bits (203), Expect = 2e-14
Identities = 42/79 (53%), Positives = 51/79 (64%), Gaps = 17/79 (21%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST------------- 425
YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP++
Sbjct: 92 YSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYYHPLVTSSDE 151
Query: 424 ----GYSPSQPGYSPSSTS 380
YSP+ P YS +S S
Sbjct: 152 GPVVRYSPTSPAYSNTSPS 170
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 8 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 67
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 68 SPAYSPTSPA-YSP 80
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 29 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 88
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 89 SPAYSPTSPA-YSP 101
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 50 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPT 109
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 110 SPAYSPTSPA-YSP 122
[117][TOP]
>UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y387_SORBI
Length = 1874
Score = 95.1 bits (235), Expect = 3e-18
Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPS 410
YSPTSP YSPTSPSYSP+S +YSP+SP+ S TSP YSPSSP +SP S GYSP+
Sbjct: 1687 YSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPT 1746
Query: 409 QPGYSPSSTSQYTP 368
PGYSP+S + Y+P
Sbjct: 1747 SPGYSPTSPT-YSP 1759
Score = 89.4 bits (220), Expect = 2e-16
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+S +YSP+SP+ S TSP YSP+S +SP S YSP+ P YSPS
Sbjct: 1666 YSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPS 1725
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1726 SPS-YSP 1731
Score = 86.7 bits (213), Expect = 1e-15
Identities = 43/69 (62%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSP+SPSYSP+SPTYSP+S S TSP YSP+SP +SP S YSP+ P Y+ S
Sbjct: 1715 YSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLS 1774
Query: 388 STSQYTPKT 362
T + T
Sbjct: 1775 YTEYNSSNT 1783
Score = 84.3 bits (207), Expect = 6e-15
Identities = 43/69 (62%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP S SYSPTSP YSP+SP+YSP+S S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1659 YSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPT 1718
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1719 SPS-YSPSS 1726
Score = 82.0 bits (201), Expect = 3e-14
Identities = 42/69 (60%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTS--PSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
Y+P+SPS+SPTS PSYSP+S +YSP+SP+ S TSP YSP+S +SP S YSP+ P YS
Sbjct: 1643 YNPSSPSFSPTSTSPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYS 1702
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1703 PASLS-YSP 1710
Score = 81.6 bits (200), Expect = 4e-14
Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--TSPDYSPSSPQFSPSTGYSPSQPGYSP 392
YSPTSP+YSPTSPSYS S +YSP+ P + SPDYSP+SP FSP+ SP+ YSP
Sbjct: 1800 YSPTSPTYSPTSPSYSLPSLSYSPNRPTDDSGRPSPDYSPTSPNFSPNRSDSPTAADYSP 1859
Query: 391 SSTSQYTPKTND 356
SST Q K +
Sbjct: 1860 SSTGQAIEKDGE 1871
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 23/98 (23%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF----------------- 437
YSPTSP+YSPTS YSP+SP YSP+SP S TSP+YSP+SP +
Sbjct: 1729 YSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSSNTYSPTR 1788
Query: 436 ------SPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDP 341
S + YSP+ P YSP+S S P + + + P
Sbjct: 1789 PRITLDSQAPDYSPTSPTYSPTSPSYSLPSLSYSPNRP 1826
Score = 72.4 bits (176), Expect = 2e-11
Identities = 46/98 (46%), Positives = 53/98 (54%), Gaps = 22/98 (22%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP--------YNSGTS--------------PDYSP 452
YSPTSP YSPTSP+YSP+SP YSP+SP YNS + PDYSP
Sbjct: 1743 YSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSSNTYSPTRPRITLDSQAPDYSP 1802
Query: 451 SSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 338
+SP YSP+ P YS S S Y+P N DD G
Sbjct: 1803 TSPT------YSPTSPSYSLPSLS-YSP--NRPTDDSG 1831
Score = 70.1 bits (170), Expect = 1e-10
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GTSPDYSPSSPQFSPSTGYSPSQP 404
Y+P SP YSPT+P Y+P SP YSP++P +S SP Y+P SP S+ Y+PS P
Sbjct: 1592 YTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNPISPN---SSRYNPSSP 1648
Query: 403 GYSPSSTS-QYTP 368
+SP+STS Y+P
Sbjct: 1649 SFSPTSTSPSYSP 1661
Score = 67.0 bits (162), Expect = 9e-10
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 13/79 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS---YSPSSP---------TYSPSSPYNSGTSPDYSPSSPQFSP-ST 425
YS SP Y+P SP+ Y+PSSP +YSP+S S TSP YSP+SP +SP S
Sbjct: 1626 YSSASPIYNPISPNSSRYNPSSPSFSPTSTSPSYSPASASYSPTSPFYSPTSPSYSPASL 1685
Query: 424 GYSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S S Y+P
Sbjct: 1686 SYSPTSPFYSPTSPS-YSP 1703
Score = 59.3 bits (142), Expect = 2e-07
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
Y+ SP + TS SY+P SP YSP++P + SP YSP++P S YS + P Y+P S
Sbjct: 1578 YNAASPVNASTSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNPIS 1637
Query: 385 --TSQYTPKT 362
+S+Y P +
Sbjct: 1638 PNSSRYNPSS 1647
[118][TOP]
>UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TK89_PHYPA
Length = 1646
Score = 95.1 bits (235), Expect = 3e-18
Identities = 47/76 (61%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSP YSP+SP YSP+SP S TSP Y+P+SP +SP S YSP+ P YSP+
Sbjct: 1563 YSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPT 1622
Query: 388 STSQYTPKTNDNKDDP 341
S S Y+P + K P
Sbjct: 1623 SPS-YSPTSPAYKHKP 1637
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSP SP YSP+SP YSP+SP S TSP YSP+SP +SP S GYSP+ PGYSP+
Sbjct: 1528 YSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPT 1587
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1588 SPS-YSP 1593
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 1556 YSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPT 1615
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1616 SPS-YSP 1621
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1549 YSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPT 1608
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1609 SPS-YSP 1614
Score = 91.7 bits (226), Expect = 4e-17
Identities = 45/67 (67%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S GYSP+ P YSP+
Sbjct: 1535 YSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPT 1594
Query: 388 STSQYTP 368
S S Y P
Sbjct: 1595 SPS-YAP 1600
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P Y+P+
Sbjct: 1542 YSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPT 1601
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1602 SPS-YSP 1607
Score = 87.0 bits (214), Expect = 9e-16
Identities = 40/62 (64%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSPSYSP+SP+Y+P+SP S TSP YSP+SP +SP S YSP+ P Y
Sbjct: 1577 YSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYKHK 1636
Query: 388 ST 383
T
Sbjct: 1637 PT 1638
Score = 76.6 bits (187), Expect = 1e-12
Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
S +SP+SP YSPSSP YSP SP S TSP YSP+SP +SP S GYSP+ P YSP+S
Sbjct: 1518 SMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPG- 1576
Query: 376 YTP 368
Y+P
Sbjct: 1577 YSP 1579
Score = 60.5 bits (145), Expect = 9e-08
Identities = 37/78 (47%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = -3
Query: 562 SPTSPS-YSPT--SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSP 392
SP S + +SP S +SPSSP YSPSSP S SP YSP+SP GYSP+ PGYSP
Sbjct: 1505 SPLSEAQFSPYVGSMPFSPSSPGYSPSSPGYSPLSPGYSPTSP------GYSPTSPGYSP 1558
Query: 391 SSTSQYTPKTNDNKDDPG 338
+S + + PG
Sbjct: 1559 TSPGYSPTSPSYSPTSPG 1576
[119][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1EA31_9CHLO
Length = 1720
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1625 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPTSPQYSPT 1684
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1685 S-PQYSP 1690
Score = 94.0 bits (232), Expect = 7e-18
Identities = 48/88 (54%), Positives = 59/88 (67%), Gaps = 15/88 (17%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1632 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1691
Query: 388 S--------------TSQYTPKTNDNKD 347
S + QY+P T + D
Sbjct: 1692 SLGLSDADAPTRSPTSPQYSPSTEADGD 1719
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1611 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPT 1670
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1671 S-PQYSP 1676
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1527 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1586
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1587 SPA-YSP 1592
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1548 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1607
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1608 SPA-YSP 1613
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1569 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1628
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1629 SPA-YSP 1634
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1590 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1649
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1650 SPA-YSP 1655
Score = 83.2 bits (204), Expect = 1e-14
Identities = 40/63 (63%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S +
Sbjct: 1524 SPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA- 1582
Query: 376 YTP 368
Y+P
Sbjct: 1583 YSP 1585
Score = 82.8 bits (203), Expect = 2e-14
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1597 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1656
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1657 SPAYSPTS-PQYSP 1669
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1534 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1593
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1594 SPAYSPTSPA-YSP 1606
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1555 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1614
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1615 SPAYSPTSPA-YSP 1627
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1576 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1635
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1636 SPAYSPTSPA-YSP 1648
[120][TOP]
>UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q5I6_MALGO
Length = 1607
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1479 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1538
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1539 S-PQYSP 1544
Score = 94.7 bits (234), Expect = 4e-18
Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSP+
Sbjct: 1500 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1559
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1560 S-PQYSP 1565
Score = 91.7 bits (226), Expect = 4e-17
Identities = 43/60 (71%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP S YSP+ P YSPS
Sbjct: 1521 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPS 1580
Score = 85.9 bits (211), Expect = 2e-15
Identities = 46/80 (57%), Positives = 54/80 (67%), Gaps = 14/80 (17%)
Frame = -3
Query: 565 YSPTSPS-------------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 428
YSPTSP+ YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP S
Sbjct: 1459 YSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1518
Query: 427 TGYSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S QY+P
Sbjct: 1519 PQYSPTSPQYSPTS-PQYSP 1537
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/77 (61%), Positives = 54/77 (70%), Gaps = 8/77 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP YS P+SP YSP+SP S TSP YSP+SPQ+SP S YSP+
Sbjct: 1507 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1566
Query: 409 QPGYSPSSTSQYTPKTN 359
P YSP+S QY+P N
Sbjct: 1567 SPQYSPTS-PQYSPSGN 1582
Score = 83.6 bits (205), Expect = 1e-14
Identities = 46/74 (62%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP YS P+SP YSP+SP S TSP YSP+SPQ+SP S YSP+
Sbjct: 1486 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1545
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S QY+P
Sbjct: 1546 SPQYSPTS-PQYSP 1558
Score = 80.5 bits (197), Expect = 8e-14
Identities = 39/60 (65%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SPS G S + SP
Sbjct: 1535 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPSGNVGASAASGAASP 1594
Score = 74.3 bits (181), Expect = 6e-12
Identities = 45/97 (46%), Positives = 53/97 (54%), Gaps = 34/97 (35%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPS--------------------SPTYSPSSPYNSGTSPDYSPSSPQF 437
TSPSYSPTSPSYSPS SP YSP+SP S TSP YSP+SPQ+
Sbjct: 1400 TSPSYSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQY 1459
Query: 436 SPST--------------GYSPSQPGYSPSSTSQYTP 368
SP++ YSP+ P YSP+S QY+P
Sbjct: 1460 SPTSPAGPRGRRLGASGPKYSPTSPQYSPTS-PQYSP 1495
Score = 72.4 bits (176), Expect = 2e-11
Identities = 45/100 (45%), Positives = 55/100 (55%), Gaps = 34/100 (34%)
Frame = -3
Query: 565 YSPTSPSYSPTSP--------------------SYSPSSPTYSPSSPYNSGTSPDYSPSS 446
YSPTSPSYSP+SP +YSP+SP YSP+SP S TSP YSP+S
Sbjct: 1404 YSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYSPTS 1463
Query: 445 -------------PQFSP-STGYSPSQPGYSPSSTSQYTP 368
P++SP S YSP+ P YSP+S QY+P
Sbjct: 1464 PAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTS-PQYSP 1502
Score = 64.3 bits (155), Expect = 6e-09
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY---NSGTSPDYSPSSPQF---SPSTGYSPSQP 404
++PTSP Y PTSP+Y+ +SP SP+ TSP YSP+SP+ + S YSP+ P
Sbjct: 1350 FAPTSPGYVPTSPAYNATSPALGAMSPWVGAAGATSPAYSPTSPRIFAGATSPSYSPTSP 1409
Query: 403 GYSPSS 386
YSPSS
Sbjct: 1410 SYSPSS 1415
[121][TOP]
>UniRef100_O96452 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
RepID=O96452_ANTLO
Length = 1553
Score = 94.4 bits (233), Expect = 5e-18
Identities = 47/83 (56%), Positives = 56/83 (67%), Gaps = 7/83 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1460 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1519
Query: 388 STSQ------YTPKTNDNKDDPG 338
S + Y P T D G
Sbjct: 1520 SPAYSPTSPVYRPSTRAKDQDQG 1542
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1439 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1498
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1499 SPA-YSP 1504
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1446 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1505
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1506 SPAYSPTSPA-YSP 1518
Score = 80.9 bits (198), Expect = 6e-14
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 2/65 (3%)
Frame = -3
Query: 556 TSPS-YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSST 383
T+PS YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1434 TTPSVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1493
Query: 382 SQYTP 368
+ Y+P
Sbjct: 1494 A-YSP 1497
Score = 78.6 bits (192), Expect = 3e-13
Identities = 35/57 (61%), Positives = 43/57 (75%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYS 395
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP + PST G++
Sbjct: 1488 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPVYRPSTRAKDQDQGFN 1544
[122][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MI48_9CHLO
Length = 1694
Score = 94.0 bits (232), Expect = 7e-18
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1589 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1648
Query: 388 STSQYTP 368
S QY+P
Sbjct: 1649 S-PQYSP 1654
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1568 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1627
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1628 SPA-YSP 1633
Score = 88.6 bits (218), Expect = 3e-16
Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+PTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1562 APTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1621
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1622 PA-YSP 1626
Score = 86.3 bits (212), Expect = 1e-15
Identities = 44/72 (61%), Positives = 54/72 (75%), Gaps = 6/72 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS-----YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSP+YSPTSP+ YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1549 YSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1608
Query: 403 GYSPSSTSQYTP 368
YSP+S + Y+P
Sbjct: 1609 AYSPTSPA-YSP 1619
Score = 84.7 bits (208), Expect = 4e-15
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 10/84 (11%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST----------GYS 416
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SPQ+SP++ S
Sbjct: 1610 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSVGLSDVENAPTRS 1669
Query: 415 PSQPGYSPSSTSQYTPKTNDNKDD 344
P+ P YSP+ ++P K++
Sbjct: 1670 PTSPQYSPTE-GAFSPMETTEKEE 1692
Score = 84.3 bits (207), Expect = 6e-15
Identities = 43/72 (59%), Positives = 53/72 (73%), Gaps = 6/72 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNS-----GTSPDYSPSSPQFSP-STGYSPSQP 404
+SPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P
Sbjct: 1528 FSPTSPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSP 1587
Query: 403 GYSPSSTSQYTP 368
YSP+S + Y+P
Sbjct: 1588 AYSPTSPA-YSP 1598
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1575 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1634
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1635 SPAYSPTSPA-YSP 1647
[123][TOP]
>UniRef100_Q58EF0 Polr2a protein (Fragment) n=2 Tax=Danio rerio RepID=Q58EF0_DANRE
Length = 161
Score = 92.8 bits (229), Expect = 2e-17
Identities = 44/78 (56%), Positives = 59/78 (75%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG----YSPSQPGY 398
YSPTSP+YSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SP++ YSP+ PGY
Sbjct: 81 YSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 140
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + Y+P + + D
Sbjct: 141 SPTSPT-YSPAISPDDSD 157
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 18 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 76
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 77 TTPKYSP 83
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 25 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 84
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 85 SPT-YSP 90
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 67 YSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 126
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 127 SPKGSTYSP 135
Score = 90.1 bits (222), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 53 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPT 112
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 113 S-PKYSP 118
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/67 (61%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 4 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 63
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 64 S-PKYSP 69
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 46 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPT 105
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 106 SPT-YSP 111
Score = 78.6 bits (192), Expect = 3e-13
Identities = 42/71 (59%), Positives = 52/71 (73%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 32 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 87
Query: 400 YSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 88 YSPTSPT-YTP 97
Score = 77.0 bits (188), Expect = 9e-13
Identities = 36/62 (58%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = -3
Query: 550 PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQY 374
P Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+SP +SPS+ Y+P+ P YSP+S +Y
Sbjct: 2 PRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKY 60
Query: 373 TP 368
+P
Sbjct: 61 SP 62
[124][TOP]
>UniRef100_Q4QZ03 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum tuberosum
RepID=Q4QZ03_SOLTU
Length = 361
Score = 92.8 bits (229), Expect = 2e-17
Identities = 46/67 (68%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP S YSP+ YSP+
Sbjct: 144 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPT 203
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 204 SPS-YSP 209
Score = 92.8 bits (229), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
YSPTSP+YSPT PSYSP+ P+YSP+SP S TSP YSP+SP +SP+ YSP+ PGYSP+
Sbjct: 228 YSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPT 287
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 288 SPS-YSP 293
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+SP+YSP+ P S TSP YSP+SP +SP S YSP+ P Y+PS
Sbjct: 249 YSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPS 308
Query: 388 STSQYTP 368
++Y+P
Sbjct: 309 --ARYSP 313
Score = 92.0 bits (227), Expect = 3e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP+SP YSP+SP YSP+SP YSP+SP S TSP YSP+SP +SPS+ GYSP+ P YSP+
Sbjct: 123 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 182
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 183 SPS-YSP 188
Score = 91.7 bits (226), Expect = 4e-17
Identities = 45/70 (64%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+
Sbjct: 130 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 189
Query: 388 STSQYTPKTN 359
S S Y+P ++
Sbjct: 190 SPS-YSPTSS 198
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSPSYSP+SP+YSP+S S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 172 YSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPT 231
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 232 SPA-YSP 237
Score = 90.5 bits (223), Expect = 8e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSP+S +YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 179 YSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPT 238
Query: 388 STSQYTP 368
S Y+P
Sbjct: 239 LPS-YSP 244
Score = 90.5 bits (223), Expect = 8e-17
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTS SYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 186 YSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPT 245
Query: 388 STSQYTP 368
S Y+P
Sbjct: 246 LPS-YSP 251
Score = 89.0 bits (219), Expect = 2e-16
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+YSP+SP YSP+SP S T P YSP+ P +SP S YSP+ P YSP+
Sbjct: 207 YSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPT 266
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 267 SPS-YSP 272
Score = 88.2 bits (217), Expect = 4e-16
Identities = 44/73 (60%), Positives = 54/73 (73%), Gaps = 5/73 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSPSYSPT P+YSP+SP YSP+SP S TSP YSP+SP ++PS YSPS YSP+S
Sbjct: 263 YSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSL-AYSPTS 321
Query: 385 -----TSQYTPKT 362
+S Y+P +
Sbjct: 322 PKLSPSSPYSPSS 334
Score = 87.8 bits (216), Expect = 5e-16
Identities = 41/67 (61%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSPS 389
YSP+SP YSPTSP+YSP+SP+YSP+SP S TS YSP+SP +SP++ YSP+ P YSP+
Sbjct: 165 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPT 224
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 225 SPA-YSP 230
Score = 86.7 bits (213), Expect = 1e-15
Identities = 45/68 (66%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Frame = -3
Query: 565 YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
+SPTS P YSP+SP YSPSSP YSP+SP S TSP YSP+SP +SP S YSPS PGYSP
Sbjct: 115 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 174
Query: 391 SSTSQYTP 368
+S + Y+P
Sbjct: 175 TSPA-YSP 181
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+ P S T P YSP+SP +SP S YSP+ P YSP+
Sbjct: 214 YSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPT 273
Query: 388 STSQYTP 368
+ Y+P
Sbjct: 274 FPA-YSP 279
Score = 86.7 bits (213), Expect = 1e-15
Identities = 44/73 (60%), Positives = 53/73 (72%), Gaps = 5/73 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN-----SGTSPDYSPSSPQFSPSTGYSPSQPG 401
YSPTSPSYSPTSPSYSP+SP+Y+PS+ Y+ S TSP SPSSP S YSP+ P
Sbjct: 284 YSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPYSPSSPSYSPTSPS 343
Query: 400 YSPSSTSQYTPKT 362
YSP+S S Y+P +
Sbjct: 344 YSPTSPS-YSPSS 355
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/92 (51%), Positives = 54/92 (58%), Gaps = 26/92 (28%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF----------------- 437
YSPTSPSYSPTSPSYSP+ P YSP+SP S TSP YSP+SP +
Sbjct: 256 YSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSL 315
Query: 436 ---------SPSTGYSPSQPGYSPSSTSQYTP 368
SPS+ YSPS P YSP+S S Y+P
Sbjct: 316 AYSPTSPKLSPSSPYSPSSPSYSPTSPS-YSP 346
Score = 80.9 bits (198), Expect = 6e-14
Identities = 45/74 (60%), Positives = 52/74 (70%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP----- 404
YSPT PSYSPT PSYSP+SP+YSP+SP S TSP YSP+ P +SP S GYSP+ P
Sbjct: 235 YSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPT 294
Query: 403 --GYSPSSTSQYTP 368
YSP+S S Y P
Sbjct: 295 SPSYSPTSPS-YNP 307
Score = 78.6 bits (192), Expect = 3e-13
Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPG 401
YSPTS SYSPTSPSYSP+SP YSP SP TSP YSP+SP +SP+ YSP+ P
Sbjct: 193 YSPTSSSYSPTSPSYSPTSPIYSPTSPAYSP----TSPAYSPTSPAYSPTLPSYSPTLPS 248
Query: 400 YSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 249 YSPTSPS-YSP 258
Score = 77.4 bits (189), Expect = 7e-13
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP+YS P+SP YSP+SP S TSP YSP+S +SP S YSP+
Sbjct: 151 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPT 210
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 211 SPIYSPTSPA-YSP 223
Score = 70.9 bits (172), Expect = 6e-11
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 428
YSPTSP SP+SP YSPSSP+YSP+SP S TSP YSPSSP +SPS
Sbjct: 317 YSPTSPKLSPSSP-YSPSSPSYSPTSPSYSPTSPSYSPSSPTYSPS 361
Score = 70.5 bits (171), Expect = 8e-11
Identities = 42/71 (59%), Positives = 43/71 (60%), Gaps = 12/71 (16%)
Frame = -3
Query: 565 YSPTSPSY------------SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 422
YSPTSPSY SPTSP SPSSP YSPSSP S TSP YSP+SP
Sbjct: 298 YSPTSPSYNPSARYSPSLAYSPTSPKLSPSSP-YSPSSPSYSPTSPSYSPTSP------S 350
Query: 421 YSPSQPGYSPS 389
YSPS P YSPS
Sbjct: 351 YSPSSPTYSPS 361
Score = 58.9 bits (141), Expect = 3e-07
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = -3
Query: 547 SYSPTS-PSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYT 371
++SPTS P YSPSSP YSPSSP YSP+SP GYSP+ PGYSP+S
Sbjct: 114 AFSPTSSPGYSPSSPGYSPSSP-------GYSPTSP------GYSPTSPGYSPTSPGYSP 160
Query: 370 PKTNDNKDDPG 338
+ PG
Sbjct: 161 TSPTYSPSSPG 171
[125][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IRZ2_CHLRE
Length = 1789
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1564 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1623
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1624 SPA-YSP 1629
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1585 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1644
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1645 SPA-YSP 1650
Score = 91.7 bits (226), Expect = 4e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1557 YSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1616
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1617 SPA-YSP 1622
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1550 YSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1609
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1610 SPA-YSP 1615
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/70 (62%), Positives = 54/70 (77%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1592 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1651
Query: 388 S---TSQYTP 368
S + Y+P
Sbjct: 1652 SPAYSPAYSP 1661
Score = 90.5 bits (223), Expect = 8e-17
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP+ YSP+ P YSP+S
Sbjct: 1613 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPA--YSPTSPQYSPTS 1670
Query: 385 TS 380
S
Sbjct: 1671 PS 1672
Score = 85.5 bits (210), Expect = 3e-15
Identities = 43/73 (58%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+ S TSP YSP+SP SP S YSP+ P YSP+
Sbjct: 1634 YSPTSPAYSPTSPAYSPTSPAYSPA---YSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPT 1690
Query: 388 STSQYTPKTNDNK 350
S + Y+P T +
Sbjct: 1691 SPN-YSPSTRQRR 1702
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSST 383
P SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1545 PMSPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1604
Query: 382 SQYTP 368
+ Y+P
Sbjct: 1605 A-YSP 1608
Score = 81.3 bits (199), Expect = 5e-14
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1571 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1630
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1631 SPAYSPTSPA-YSP 1643
Score = 72.4 bits (176), Expect = 2e-11
Identities = 37/66 (56%), Positives = 44/66 (66%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP YSPTSPS SP+SP YSP+SP S TSP+YSPS+ Q ST P+ G ++
Sbjct: 1659 YSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPTSPNYSPSTRQRRRSTRPRPTSLGRRRAA 1718
Query: 385 TSQYTP 368
Q P
Sbjct: 1719 RVQAAP 1724
[126][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
castellanii RepID=O00820_ACACA
Length = 1569
Score = 92.0 bits (227), Expect = 3e-17
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSP+SP YSP+SP YSPSSP S TSP YSP+SP +SP S YSP+ P YSPS
Sbjct: 1489 YSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPS 1548
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1549 SPS-YSP 1554
Score = 91.7 bits (226), Expect = 4e-17
Identities = 42/60 (70%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP+YSPTSP YSP+SP+YSP+SP S TSP YSPSSP +SP S YSP+ P YSPS
Sbjct: 1510 YSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPS 1569
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/69 (62%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSP+SP YSPSSP YSP+SP S +SP YSP+SP++SP S YSP+ P YSP+
Sbjct: 1482 YSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPT 1541
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1542 SPS-YSPSS 1549
Score = 85.5 bits (210), Expect = 3e-15
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SP+SPSYSP SP YSP+ YSPSSP S +SP YSPSSP +SP S GYSPS P YSP+S
Sbjct: 1462 SPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTS 1521
Query: 385 TSQYTP 368
+Y+P
Sbjct: 1522 -PKYSP 1526
Score = 84.0 bits (206), Expect = 7e-15
Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SP YSP YSPSSP YSPSSP S +SP YSP+SP +SPS+ YSP+ P YSP+
Sbjct: 1468 YSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPA 1527
Query: 388 STSQYTP 368
S S Y+P
Sbjct: 1528 SPS-YSP 1533
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP YSP+SP YSPSSP YSPSSP S SP YSPSSP +SP S YSP+ P YSP+
Sbjct: 1475 YSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPT 1534
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1535 SPA-YSP 1540
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSP+SP YSP SP YS P+SP YSP+SP S TSP YSP+SP +SPS+ YSP+
Sbjct: 1496 YSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPSSPSYSPT 1555
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S S Y+P
Sbjct: 1556 SPSYSPTSPS-YSP 1568
Score = 77.4 bits (189), Expect = 7e-13
Identities = 41/69 (59%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPT--SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYS 395
+SP S+SP+ SPSYSP+SP YSP+ S +SP YSPSSP +SPS+ GYSP+ PGYS
Sbjct: 1452 FSPGRGSFSPSPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYS 1511
Query: 394 PSSTSQYTP 368
PSS + Y+P
Sbjct: 1512 PSSPA-YSP 1519
Score = 54.7 bits (130), Expect = 5e-06
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Frame = -3
Query: 547 SYSPTSP--SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQ 377
SYSP +SP ++SPS +SP YSP+SP +SP+ GYSPS PGYSPSS
Sbjct: 1442 SYSPYVDFGEFSPGRGSFSPSP-----SSPSYSPASPGYSPAGAGYSPSSPGYSPSSPG- 1495
Query: 376 YTPKT 362
Y+P +
Sbjct: 1496 YSPSS 1500
[127][TOP]
>UniRef100_B4R347 RNA polymerase II 215kD subunit n=1 Tax=Drosophila simulans
RepID=B4R347_DROSI
Length = 552
Score = 92.0 bits (227), Expect = 3e-17
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T YSP+ P YS S
Sbjct: 343 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 402
Query: 388 STSQYTP 368
QY+P
Sbjct: 403 --PQYSP 407
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 13/90 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-------YSPSSPQFSPSTGYSPSQ 407
YSPTSPSYSP+SPSYSP+SP YSP+SP S TSP+ YSP+SP +S S YSP+
Sbjct: 350 YSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPAS 409
Query: 406 PGYSPS------STSQYTPKTNDNKDDPGT 335
P YS + ++ Y+P + PG+
Sbjct: 410 PAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 439
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 419 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 478
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 479 TGSTYSATS-PRYSP 492
Score = 75.9 bits (185), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 405 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 464
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 465 PSSPQHSPS--NQYSP 478
Score = 75.5 bits (184), Expect = 3e-12
Identities = 40/67 (59%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSPS 389
YSP SP YSPTSP YSPSSP +SPS+ Y S T YS +SP++SP+ YSPS YSP+
Sbjct: 449 YSPASPKYSPTSPLYSPSSPQHSPSNQY-SPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 507
Query: 388 STSQYTP 368
S + YTP
Sbjct: 508 SPT-YTP 513
Score = 75.1 bits (183), Expect = 3e-12
Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 11/77 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPY-----NSGTSPDYSPSSPQFSP-STGY 419
YSPTSP+Y+ +SP +YSPSSP YSP+SP + T+P+++P S +SP S+GY
Sbjct: 244 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGY 303
Query: 418 SPSQPGYSPSSTSQYTP 368
SP+ PGYSP++ Q +P
Sbjct: 304 SPTSPGYSPTAQFQSSP 320
Score = 75.1 bits (183), Expect = 3e-12
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 28/96 (29%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN-------------SGTSPDYSPSSPQFSPST 425
Y+P SP YSP SP YSP+SP YSPSSP + S TSP YSP+ +SPS+
Sbjct: 442 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 501
Query: 424 ---------------GYSPSQPGYSPSSTSQYTPKT 362
YSP+ P YSP++ S Y+PK+
Sbjct: 502 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKS 537
Score = 73.9 bits (180), Expect = 8e-12
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP+SP S +SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 330 YSPGN-AYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP- 387
Query: 388 STSQYTPKTNDNKDDP 341
T Y+P + + P
Sbjct: 388 VTPSYSPTSPNYSASP 403
Score = 73.6 bits (179), Expect = 1e-11
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 23/89 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--------------------TSPDYSPSS 446
YSPTSPSYSPTSP+Y+P +P+YSP+SP S TSP YSP S
Sbjct: 371 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 430
Query: 445 PQFSPSTG---YSPSQPGYSPSSTSQYTP 368
P + S G Y+P P YSP+S +Y+P
Sbjct: 431 PSYDGSPGSPQYTPGSPQYSPAS-PKYSP 458
Score = 72.0 bits (175), Expect = 3e-11
Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP P YSP
Sbjct: 483 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSP 542
Query: 391 SS 386
SS
Sbjct: 543 SS 544
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 436 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 494
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 495 SIYSPSST-KYSP 506
Score = 69.3 bits (168), Expect = 2e-10
Identities = 42/86 (48%), Positives = 48/86 (55%), Gaps = 20/86 (23%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------------- 431
Y P SPS SPSYSP+SP Y+ SSP G SP+YSPSSP +SP
Sbjct: 233 YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYASPRYASTTP 287
Query: 430 -----STGYSPSQPGYSPSSTSQYTP 368
STGYSPS GYSP+S Y+P
Sbjct: 288 NFNPQSTGYSPSSSGYSPTSPG-YSP 312
Score = 67.4 bits (163), Expect = 7e-10
Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 14/80 (17%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------YSPSSPYNSGTSPDYSPSSPQFSP-S 428
YSP+S YSPTSP YSP SSP+ YSP + Y S +S +YSP+SP +SP S
Sbjct: 296 YSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAY-SPSSSNYSPNSPSYSPTS 354
Query: 427 TGYSPSQPGYSPSSTSQYTP 368
YSPS P YSP+S Y+P
Sbjct: 355 PSYSPSSPSYSPTSPC-YSP 373
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F S
Sbjct: 504 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSSPTFEES 550
Score = 62.0 bits (149), Expect = 3e-08
Identities = 47/128 (36%), Positives = 55/128 (42%), Gaps = 60/128 (46%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-------------------SYSPSSPTYSPSSP-------------- 485
YSP+SP+YSPTSP YSPSS YSP+SP
Sbjct: 263 YSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSF 322
Query: 484 -------YNSG-------------------TSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
Y+ G TSP YSPSSP +SP S YSP+ P YSP+S
Sbjct: 323 AGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTS 382
Query: 385 TSQYTPKT 362
+ YTP T
Sbjct: 383 PN-YTPVT 389
Score = 60.8 bits (146), Expect = 7e-08
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 208 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 267
Query: 406 PGYSPSSTSQYTPK 365
P YSP+S +P+
Sbjct: 268 PNYSPTSPLYASPR 281
[128][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IK28_DROSE
Length = 1887
Score = 92.0 bits (227), Expect = 3e-17
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T YSP+ P YS S
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737
Query: 388 STSQYTP 368
QY+P
Sbjct: 1738 --PQYSP 1742
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 13/90 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-------YSPSSPQFSPSTGYSPSQ 407
YSPTSPSYSP+SPSYSP+SP YSP+SP S TSP+ YSP+SP +S S YSP+
Sbjct: 1685 YSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPAS 1744
Query: 406 PGYSPS------STSQYTPKTNDNKDDPGT 335
P YS + ++ Y+P + PG+
Sbjct: 1745 PAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1774
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1754 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1813
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1814 TGSTYSATS-PRYSP 1827
Score = 75.9 bits (185), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1740 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1799
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1800 PSSPQHSPS--NQYSP 1813
Score = 75.9 bits (185), Expect = 2e-12
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1784 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1843
Query: 445 PQFSPST-GYSPSQPGYSPSSTSQYTP 368
P ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1844 PTYTPTARNYSPTSPMYSPTAPSHYSP 1870
Score = 75.1 bits (183), Expect = 3e-12
Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 11/77 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPY-----NSGTSPDYSPSSPQFSP-STGY 419
YSPTSP+Y+ +SP +YSPSSP YSP+SP + T+P+++P S +SP S+GY
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGY 1638
Query: 418 SPSQPGYSPSSTSQYTP 368
SP+ PGYSP++ Q +P
Sbjct: 1639 SPTSPGYSPTAQFQSSP 1655
Score = 73.9 bits (180), Expect = 8e-12
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP+SP S +SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 1665 YSPGN-AYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP- 1722
Query: 388 STSQYTPKTNDNKDDP 341
T Y+P + + P
Sbjct: 1723 VTPSYSPTSPNYSASP 1738
Score = 73.6 bits (179), Expect = 1e-11
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 23/89 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--------------------TSPDYSPSS 446
YSPTSPSYSPTSP+Y+P +P+YSP+SP S TSP YSP S
Sbjct: 1706 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 1765
Query: 445 PQFSPSTG---YSPSQPGYSPSSTSQYTP 368
P + S G Y+P P YSP+S +Y+P
Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPAS-PKYSP 1793
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1777 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1836
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1837 TKYSPTSPT-YTP 1848
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP+ P YSP
Sbjct: 1818 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1877
Query: 391 SS 386
SS
Sbjct: 1878 SS 1879
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1829
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1830 SIYSPSST-KYSP 1841
Score = 69.3 bits (168), Expect = 2e-10
Identities = 42/86 (48%), Positives = 48/86 (55%), Gaps = 20/86 (23%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------------- 431
Y P SPS SPSYSP+SP Y+ SSP G SP+YSPSSP +SP
Sbjct: 1568 YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYASPRYASTTP 1622
Query: 430 -----STGYSPSQPGYSPSSTSQYTP 368
STGYSPS GYSP+S Y+P
Sbjct: 1623 NFNPQSTGYSPSSSGYSPTSPG-YSP 1647
Score = 67.4 bits (163), Expect = 7e-10
Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 14/80 (17%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------YSPSSPYNSGTSPDYSPSSPQFSP-S 428
YSP+S YSPTSP YSP SSP+ YSP + Y S +S +YSP+SP +SP S
Sbjct: 1631 YSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAY-SPSSSNYSPNSPSYSPTS 1689
Query: 427 TGYSPSQPGYSPSSTSQYTP 368
YSPS P YSP+S Y+P
Sbjct: 1690 PSYSPSSPSYSPTSPC-YSP 1708
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F S
Sbjct: 1839 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
Score = 62.0 bits (149), Expect = 3e-08
Identities = 47/128 (36%), Positives = 55/128 (42%), Gaps = 60/128 (46%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-------------------SYSPSSPTYSPSSP-------------- 485
YSP+SP+YSPTSP YSPSS YSP+SP
Sbjct: 1598 YSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSF 1657
Query: 484 -------YNSG-------------------TSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
Y+ G TSP YSPSSP +SP S YSP+ P YSP+S
Sbjct: 1658 AGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTS 1717
Query: 385 TSQYTPKT 362
+ YTP T
Sbjct: 1718 PN-YTPVT 1724
Score = 60.8 bits (146), Expect = 7e-08
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 406 PGYSPSSTSQYTPK 365
P YSP+S +P+
Sbjct: 1603 PNYSPTSPLYASPR 1616
[129][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A9UNH9_DROME
Length = 1887
Score = 92.0 bits (227), Expect = 3e-17
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T YSP+ P YS S
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737
Query: 388 STSQYTP 368
QY+P
Sbjct: 1738 --PQYSP 1742
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 13/90 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-------YSPSSPQFSPSTGYSPSQ 407
YSPTSPSYSP+SPSYSP+SP YSP+SP S TSP+ YSP+SP +S S YSP+
Sbjct: 1685 YSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPAS 1744
Query: 406 PGYSPS------STSQYTPKTNDNKDDPGT 335
P YS + ++ Y+P + PG+
Sbjct: 1745 PAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1774
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1754 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1813
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1814 TGSTYSATS-PRYSP 1827
Score = 76.6 bits (187), Expect = 1e-12
Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSPS 389
YSP SP YSPTSP YSPSSP +SPS+ Y S T YS +SP++SP+ YSPS YSP+
Sbjct: 1784 YSPASPKYSPTSPLYSPSSPQHSPSNQY-SPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1842
Query: 388 STSQYTPKTNDNKDDP 341
S + YTP + P
Sbjct: 1843 SPT-YTPTARNYSPTP 1857
Score = 75.9 bits (185), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1740 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1799
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1800 PSSPQHSPS--NQYSP 1813
Score = 73.9 bits (180), Expect = 8e-12
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP+SP S +SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 1665 YSPGN-AYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP- 1722
Query: 388 STSQYTPKTNDNKDDP 341
T Y+P + + P
Sbjct: 1723 VTPSYSPTSPNYSASP 1738
Score = 73.6 bits (179), Expect = 1e-11
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 6/66 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYA--SPRYASTTPNFNPQSTGYSPSSS 1636
Query: 403 GYSPSS 386
GYSP+S
Sbjct: 1637 GYSPTS 1642
Score = 73.6 bits (179), Expect = 1e-11
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 23/89 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--------------------TSPDYSPSS 446
YSPTSPSYSPTSP+Y+P +P+YSP+SP S TSP YSP S
Sbjct: 1706 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 1765
Query: 445 PQFSPSTG---YSPSQPGYSPSSTSQYTP 368
P + S G Y+P P YSP+S +Y+P
Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPAS-PKYSP 1793
Score = 70.5 bits (171), Expect = 8e-11
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+ P +SP+ + YSP+ P YSP
Sbjct: 1818 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSP 1877
Query: 391 SS 386
SS
Sbjct: 1878 SS 1879
Score = 67.0 bits (162), Expect = 9e-10
Identities = 32/63 (50%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y +SP + T+P+++P S +SP S+GYSP+ P YSP+ Q
Sbjct: 1595 SPNYSPSSPNYSPTSPLY--ASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQ 1652
Query: 376 YTP 368
+P
Sbjct: 1653 SSP 1655
Score = 66.6 bits (161), Expect = 1e-09
Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 14/80 (17%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------YSPSSPYNSGTSPDYSPSSPQFSP-S 428
YSP+S YSPTSP YSP SSP+ YSP + Y S +S +YSP+SP +SP S
Sbjct: 1631 YSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAY-SPSSSNYSPNSPSYSPTS 1689
Query: 427 TGYSPSQPGYSPSSTSQYTP 368
YSPS P YSP+S Y+P
Sbjct: 1690 PSYSPSSPSYSPTSPC-YSP 1708
Score = 62.8 bits (151), Expect = 2e-08
Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+ P YSP++P + S TSP YSPSSP F S
Sbjct: 1839 YSPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
Score = 62.4 bits (150), Expect = 2e-08
Identities = 45/105 (42%), Positives = 51/105 (48%), Gaps = 39/105 (37%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-------------------SYSPSSPTYSPSSPYNSGT-----SPD- 461
YSP+SP+YSPTSP YSPSS YSP+SP S T SP
Sbjct: 1598 YSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSF 1657
Query: 460 -------------YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 368
YSPSS +SP S YSP+ P YSPSS S Y+P
Sbjct: 1658 AGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPS-YSP 1701
Score = 60.8 bits (146), Expect = 7e-08
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 406 PGYSPSSTSQYTPK 365
P YSP+S +P+
Sbjct: 1603 PNYSPTSPLYASPR 1616
[130][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
melanogaster RepID=RPB1_DROME
Length = 1887
Score = 92.0 bits (227), Expect = 3e-17
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T YSP+ P YS S
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737
Query: 388 STSQYTP 368
QY+P
Sbjct: 1738 --PQYSP 1742
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 13/90 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-------YSPSSPQFSPSTGYSPSQ 407
YSPTSPSYSP+SPSYSP+SP YSP+SP S TSP+ YSP+SP +S S YSP+
Sbjct: 1685 YSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPAS 1744
Query: 406 PGYSPS------STSQYTPKTNDNKDDPGT 335
P YS + ++ Y+P + PG+
Sbjct: 1745 PAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1774
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1754 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1813
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1814 TGSTYSATS-PRYSP 1827
Score = 75.9 bits (185), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1740 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1799
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1800 PSSPQHSPS--NQYSP 1813
Score = 75.9 bits (185), Expect = 2e-12
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1784 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1843
Query: 445 PQFSPST-GYSPSQPGYSPSSTSQYTP 368
P ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1844 PTYTPTARNYSPTSPMYSPTAPSHYSP 1870
Score = 73.9 bits (180), Expect = 8e-12
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP+SP S +SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 1665 YSPGN-AYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP- 1722
Query: 388 STSQYTPKTNDNKDDP 341
T Y+P + + P
Sbjct: 1723 VTPSYSPTSPNYSASP 1738
Score = 73.6 bits (179), Expect = 1e-11
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 6/66 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYA--SPRYASTTPNFNPQSTGYSPSSS 1636
Query: 403 GYSPSS 386
GYSP+S
Sbjct: 1637 GYSPTS 1642
Score = 73.6 bits (179), Expect = 1e-11
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 23/89 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--------------------TSPDYSPSS 446
YSPTSPSYSPTSP+Y+P +P+YSP+SP S TSP YSP S
Sbjct: 1706 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 1765
Query: 445 PQFSPSTG---YSPSQPGYSPSSTSQYTP 368
P + S G Y+P P YSP+S +Y+P
Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPAS-PKYSP 1793
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1777 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1836
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1837 TKYSPTSPT-YTP 1848
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP+ P YSP
Sbjct: 1818 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1877
Query: 391 SS 386
SS
Sbjct: 1878 SS 1879
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1829
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1830 SIYSPSST-KYSP 1841
Score = 67.0 bits (162), Expect = 9e-10
Identities = 32/63 (50%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y +SP + T+P+++P S +SP S+GYSP+ P YSP+ Q
Sbjct: 1595 SPNYSPSSPNYSPTSPLY--ASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQ 1652
Query: 376 YTP 368
+P
Sbjct: 1653 SSP 1655
Score = 66.6 bits (161), Expect = 1e-09
Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 14/80 (17%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------YSPSSPYNSGTSPDYSPSSPQFSP-S 428
YSP+S YSPTSP YSP SSP+ YSP + Y S +S +YSP+SP +SP S
Sbjct: 1631 YSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAY-SPSSSNYSPNSPSYSPTS 1689
Query: 427 TGYSPSQPGYSPSSTSQYTP 368
YSPS P YSP+S Y+P
Sbjct: 1690 PSYSPSSPSYSPTSPC-YSP 1708
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F S
Sbjct: 1839 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
Score = 62.4 bits (150), Expect = 2e-08
Identities = 45/105 (42%), Positives = 51/105 (48%), Gaps = 39/105 (37%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-------------------SYSPSSPTYSPSSPYNSGT-----SPD- 461
YSP+SP+YSPTSP YSPSS YSP+SP S T SP
Sbjct: 1598 YSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSF 1657
Query: 460 -------------YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 368
YSPSS +SP S YSP+ P YSPSS S Y+P
Sbjct: 1658 AGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPS-YSP 1701
Score = 60.8 bits (146), Expect = 7e-08
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 406 PGYSPSSTSQYTPK 365
P YSP+S +P+
Sbjct: 1603 PNYSPTSPLYASPR 1616
[131][TOP]
>UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q3C6_ANOGA
Length = 1878
Score = 91.7 bits (226), Expect = 4e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSPSYSP+SP+YSP+SP + +P YSPSSP +SP S YSP+ P YSPS
Sbjct: 1679 YSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPS 1738
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 1739 S-PKYSP 1744
Score = 90.5 bits (223), Expect = 8e-17
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSPSYSPTSPSYSPSSP +SP+SP S +SP YSP+SP +SP S YSP+ P ++P
Sbjct: 1651 YSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTP- 1709
Query: 388 STSQYTPKT 362
T Y+P +
Sbjct: 1710 VTPSYSPSS 1718
Score = 90.1 bits (222), Expect = 1e-16
Identities = 42/69 (60%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
+SPTSPSYSP+SPSYSP+SP+YSP+SP S TSP+++P +P +SPS+ YSP+ P YSP+
Sbjct: 1672 FSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPA 1731
Query: 388 STSQYTPKT 362
S S Y+P +
Sbjct: 1732 SPS-YSPSS 1739
Score = 89.4 bits (220), Expect = 2e-16
Identities = 44/65 (67%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP YSPTSPSYSP+SP+YSPSSP S TSP YSPSSP +SP S YSP+ P YSP+S +
Sbjct: 1648 SPGYSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPN- 1706
Query: 376 YTPKT 362
+TP T
Sbjct: 1707 FTPVT 1711
Score = 87.0 bits (214), Expect = 9e-16
Identities = 48/74 (64%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSP-------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSPSYSP TSPSYSPSSP+YSP+SP S TSP YSP+SP F+P T YSPS
Sbjct: 1658 YSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPS 1717
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S Y+P
Sbjct: 1718 SPNYSPTS-PHYSP 1730
Score = 87.0 bits (214), Expect = 9e-16
Identities = 49/79 (62%), Positives = 56/79 (70%), Gaps = 13/79 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 410
YSPTSPSYSPTSPSYSP+SP +YSPSSP S TSP YSP+SP +SPS+ YSP+
Sbjct: 1686 YSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSPKYSPT 1745
Query: 409 QPGYSPSSTS-----QYTP 368
P YSP+S S YTP
Sbjct: 1746 SPSYSPTSPSYIGSPHYTP 1764
Score = 87.0 bits (214), Expect = 9e-16
Identities = 46/85 (54%), Positives = 57/85 (67%), Gaps = 14/85 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF---------SPSTG--- 422
YSP+SP+YSPTSP YSP+SP+YSPSSP S TSP YSP+SP + SP G
Sbjct: 1714 YSPSSPNYSPTSPHYSPASPSYSPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQAS 1773
Query: 421 --YSPSQPGYSPSSTSQYTPKTNDN 353
YSP+ P YSPSS Q++P ++ N
Sbjct: 1774 PNYSPTSPSYSPSS-PQHSPGSSSN 1797
Score = 82.8 bits (203), Expect = 2e-14
Identities = 46/72 (63%), Positives = 50/72 (69%), Gaps = 6/72 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPS-----SPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSPSYSP SP + S SP YSP+SP S TSP YSPSSP FSP S YSPS P
Sbjct: 1625 YSPTSPSYSPMSPMHPTSASNFASPGYSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSP 1684
Query: 403 GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1685 SYSPTSPS-YSP 1695
Score = 80.1 bits (196), Expect = 1e-13
Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 13/81 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-------------ST 425
YSPTSP YSP SP YSP S YSPSSP + +YSP+SP +SP S
Sbjct: 1590 YSPTSPGYSPPSPQYSPGSSNYSPSSPNIHSATQNYSPTSPSYSPMSPMHPTSASNFASP 1649
Query: 424 GYSPSQPGYSPSSTSQYTPKT 362
GYSP+ P YSP+S S Y+P +
Sbjct: 1650 GYSPTSPSYSPTSPS-YSPSS 1669
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP YSPTSPSYSP+SP+Y SP+ + SP Y +SP +SP S YSPS P +SP
Sbjct: 1735 YSPSSPKYSPTSPSYSPTSPSYI-GSPHYTPASPQYGQASPNYSPTSPSYSPSSPQHSPG 1793
Query: 388 STSQY 374
S+S +
Sbjct: 1794 SSSNH 1798
Score = 76.3 bits (186), Expect = 2e-12
Identities = 41/78 (52%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPG---Y 398
YS T YSP SYSPSSP YSP+SP + +SP YSPSSP +SP+ GYSPS P Y
Sbjct: 1806 YSQTPAPYSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPSSPASPTY 1865
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S P +D+ +D
Sbjct: 1866 SPTS-----PSYDDSNED 1878
Score = 75.9 bits (185), Expect = 2e-12
Identities = 44/89 (49%), Positives = 51/89 (57%), Gaps = 23/89 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG------ 422
YSPTSPSYSPTSPSY +P+SP Y +SP S TSP YSPSSPQ SP +
Sbjct: 1742 YSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSSPQHSPGSSSNHYSI 1801
Query: 421 -----------YSPSQPGYSPSSTSQYTP 368
YSP+ YSPSS +Y+P
Sbjct: 1802 GSSSYSQTPAPYSPNMSSYSPSS-PKYSP 1829
Score = 73.6 bits (179), Expect = 1e-11
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQP 404
YSP+SP+Y+P SP SYSP+SP YSP SP S S +YSPSSP +T YSP+ P
Sbjct: 1571 YSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPNIHSATQNYSPTSP 1630
Query: 403 GYSPSSTSQYTPKTN 359
YSP S T +N
Sbjct: 1631 SYSPMSPMHPTSASN 1645
Score = 71.2 bits (173), Expect = 5e-11
Identities = 38/75 (50%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-PSTGYSPSQPGYSPSS 386
SP PS SPSYSPSSP Y+P+SP G SP YSP+SP +S PS YSP YSPSS
Sbjct: 1558 SPYPPSSPSMSPSYSPSSPNYAPNSP--GGASPSYSPTSPGYSPPSPQYSPGSSNYSPSS 1615
Query: 385 TSQYTPKTNDNKDDP 341
+ ++ N + P
Sbjct: 1616 PNIHSATQNYSPTSP 1630
Score = 57.4 bits (137), Expect = 7e-07
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Frame = -3
Query: 547 SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP------STGYSPSQPGYSPSS 386
S+SP S S P+ SP P + SP YSPSSP ++P S YSP+ PGYSP S
Sbjct: 1542 SWSPIRGSPSSPGPSMSPYPPSSPSMSPSYSPSSPNYAPNSPGGASPSYSPTSPGYSPPS 1601
Query: 385 TSQYTPKTND 356
QY+P +++
Sbjct: 1602 -PQYSPGSSN 1610
[132][TOP]
>UniRef100_C6F1E9 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1E9_PLAVI
Length = 225
Score = 91.7 bits (226), Expect = 4e-17
Identities = 44/69 (63%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSPS
Sbjct: 63 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 122
Query: 388 STSQYTPKT 362
S P +
Sbjct: 123 SPVPNNPSS 131
Score = 89.4 bits (220), Expect = 2e-16
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 115
Query: 388 STSQYTPKT 362
S QY+P +
Sbjct: 116 S-PQYSPSS 123
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSPS P +
Sbjct: 70 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNP 129
Query: 388 STSQYTP 368
S+ Y+P
Sbjct: 130 SSPHYSP 136
Score = 70.5 bits (171), Expect = 8e-11
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 14/80 (17%)
Frame = -3
Query: 565 YSPTSPS-------------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 428
YSPTSP+ +S SP YS +SP YSP+SP S TSP YSP+SP++SP S
Sbjct: 29 YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 88
Query: 427 TGYSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S +Y+P
Sbjct: 89 PKYSPTSPKYSPTS-PKYSP 107
Score = 63.5 bits (153), Expect = 1e-08
Identities = 37/67 (55%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQFSP-STGYSPSQPGY 398
YSPTSP YSPTSP YSPSSP P++P +SP YSP +SP+FSP S YS S P Y
Sbjct: 105 YSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPKFSPTSPAYSISSPVY 158
Query: 397 SPSSTSQ 377
S ++
Sbjct: 159 DQSGNAR 165
[133][TOP]
>UniRef100_UPI00006A20E2 DNA-directed RNA polymerase II subunit RPB1 (EC 2.7.7.6) (RNA
polymerase II subunit B1) (DNA-directed RNA polymerase
II subunit A) (DNA-directed RNA polymerase III largest
subunit). n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A20E2
Length = 162
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 66 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 125
Query: 388 ST--SQYTP 368
S S Y+P
Sbjct: 126 SPKGSTYSP 134
Score = 90.9 bits (224), Expect = 6e-17
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP S YSP+ P YSP
Sbjct: 17 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP- 75
Query: 388 STSQYTP 368
+T +Y+P
Sbjct: 76 TTPKYSP 82
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 24 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 83
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 84 SPT-YSP 89
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P S YSP+ P YSP+
Sbjct: 52 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 111
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 112 S-PKYSP 117
Score = 89.4 bits (220), Expect = 2e-16
Identities = 42/67 (62%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+P SPSY+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YSP+
Sbjct: 3 YTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 62
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 63 S-PKYSP 68
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS----TGYSPSQPGY 398
YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP+ + YSP+ PGY
Sbjct: 80 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 139
Query: 397 SPSSTSQYTPKTNDNKDD 344
SP+S + + DD
Sbjct: 140 SPTSPTYSLTSPAISPDD 157
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Y+P+ P YSP+
Sbjct: 45 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 104
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 105 SPT-YSP 110
Score = 78.2 bits (191), Expect = 4e-13
Identities = 37/62 (59%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = -3
Query: 550 PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQY 374
P Y+P SPSY+PSSP+YSPSSP S TSP Y+P+SP +SPS+ Y+P+ P YSP+S +Y
Sbjct: 1 PRYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTS-PKY 59
Query: 373 TP 368
+P
Sbjct: 60 SP 61
Score = 77.4 bits (189), Expect = 7e-13
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
Y+PTSPSYSP+SP Y+P+SP YSP SP TSP YSP+SP +SP+T YSP+ P
Sbjct: 31 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP----TSPKYSPTSPTYSPTTPKYSPTSPT 86
Query: 400 YSPSSTSQYTP 368
YSP+S YTP
Sbjct: 87 YSPTS-PVYTP 96
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-STGYSPSQPGY 398
Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS + P
Sbjct: 94 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 153
Query: 397 SPSSTSQ 377
SP + +
Sbjct: 154 SPDDSDE 160
[134][TOP]
>UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0A92
Length = 1714
Score = 91.3 bits (225), Expect = 5e-17
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GTSPDYSPSSPQFSP-STGYSPSQ 407
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPSYSPTS 1651
Query: 406 PGYSPSSTSQYTP 368
P YSP+S + YTP
Sbjct: 1652 PSYSPTSPN-YTP 1663
Score = 89.7 bits (221), Expect = 1e-16
Identities = 42/66 (63%), Positives = 50/66 (75%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
Y+P SP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP S YSP+ P YSP+S
Sbjct: 1585 YTPQSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSPSYSPTS 1644
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1645 PS-YSP 1649
Score = 82.0 bits (201), Expect = 3e-14
Identities = 45/86 (52%), Positives = 55/86 (63%), Gaps = 20/86 (23%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP--------------------YNSGTSPDYSPSS 446
YSPTSPSYSPTSPSYSP+SP+YSP+SP Y+ TSP YSP+S
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPPHQLVPTSPYTPHISVYSPPTSPTYSPTS 1692
Query: 445 PQFSPSTGYSPSQPGYSPSSTSQYTP 368
P+ S YSP+ PGYSP+S + Y+P
Sbjct: 1693 PKGST---YSPTSPGYSPTSPT-YSP 1714
Score = 80.5 bits (197), Expect = 8e-14
Identities = 41/78 (52%), Positives = 53/78 (67%), Gaps = 12/78 (15%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSSPQFS------PSTG 422
YSPTSPSYSPTSPS YSP+SP+YSP+SP S TSP YSP+SP ++ P++
Sbjct: 1613 YSPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPPHQLVPTSP 1672
Query: 421 YSPSQPGYSPSSTSQYTP 368
Y+P YSP ++ Y+P
Sbjct: 1673 YTPHISVYSPPTSPTYSP 1690
Score = 75.1 bits (183), Expect = 3e-12
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSP-TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 380
SP+YSPTSP+Y P SP Y+P SP S TSP YSP+SP +SP S YSP+ P YSP+S S
Sbjct: 1567 SPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1626
Score = 56.2 bits (134), Expect = 2e-06
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP P+SPY SP+YSP+SP + P + GY+P PGYSP
Sbjct: 1539 SPAWSPTPGS--PGSP--GPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSP 1594
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1595 TSPS-YSP 1601
Score = 55.8 bits (133), Expect = 2e-06
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Frame = -3
Query: 559 PTSPSYSPT-----SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
P SP Y P+ SP+YSP+SP Y P SP Y+P SP +SP S YSP+ P Y
Sbjct: 1554 PASP-YIPSPGGAMSPNYSPTSPAYEPRSPGG------YTPQSPGYSPTSPSYSPTSPSY 1606
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1607 SPTSPS-YSP 1615
[135][TOP]
>UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS
Length = 1811
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T YSP+ P YS S
Sbjct: 1602 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1661
Query: 388 STSQYTP 368
Y+P
Sbjct: 1662 --PHYSP 1666
Score = 85.9 bits (211), Expect = 2e-15
Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+S +YSP SPSYSP+SP+YSPSSP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1595 YSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPT 1654
Query: 388 S 386
S
Sbjct: 1655 S 1655
Score = 85.5 bits (210), Expect = 3e-15
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 13/90 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-------STGYSPSQ 407
YSPTSPSYSP+SPSYSP+SP YSP+SP S TSP+Y+P++P +SP S YSP+
Sbjct: 1609 YSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPAS 1668
Query: 406 PGYSPS------STSQYTPKTNDNKDDPGT 335
P YS + ++ Y+P + PG+
Sbjct: 1669 PAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1698
Score = 80.5 bits (197), Expect = 8e-14
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 6/75 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS
Sbjct: 1501 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSAS 1560
Query: 403 GYSPSSTSQYTPKTN 359
GYSP+S Y+P +N
Sbjct: 1561 GYSPTS-PVYSPTSN 1574
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1678 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1737
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1738 TGSTYSATS-PRYSP 1751
Score = 76.3 bits (186), Expect = 2e-12
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 17/83 (20%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS---------------P 431
YSPTSPSYSPTSP+Y+P++P+YSP+SP N SP YSP+SP +S P
Sbjct: 1630 YSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQTGAKYSPTSPTYSPP 1688
Query: 430 STGY--SPSQPGYSPSSTSQYTP 368
S Y SP P Y+P S QY+P
Sbjct: 1689 SPSYDGSPGSPQYTPGS-PQYSP 1710
Score = 76.3 bits (186), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1664 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1723
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1724 PSSPQHSPS--NQYSP 1737
Score = 75.9 bits (185), Expect = 2e-12
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1708 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1767
Query: 445 PQFSPST-GYSPSQPGYSPSSTSQYTP 368
P ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1768 PTYTPTARNYSPTSPMYSPTAPSHYSP 1794
Score = 75.1 bits (183), Expect = 3e-12
Identities = 38/76 (50%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP+SP S +SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 1589 YSPGN-AYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP- 1646
Query: 388 STSQYTPKTNDNKDDP 341
+T Y+P + + P
Sbjct: 1647 ATPSYSPTSPNYSASP 1662
Score = 73.2 bits (178), Expect = 1e-11
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y+ +SP + T+P+++P S +SPS +GYSP+ P YSP+S
Sbjct: 1517 SPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFP 1576
Query: 376 YTPK---TNDNKDDPG 338
+P + N PG
Sbjct: 1577 SSPSFAGSGSNMYSPG 1592
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1701 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1760
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1761 TKYSPTSPT-YTP 1772
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP+ P YSP
Sbjct: 1742 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1801
Query: 391 SS 386
SS
Sbjct: 1802 SS 1803
Score = 70.1 bits (170), Expect = 1e-10
Identities = 44/94 (46%), Positives = 52/94 (55%), Gaps = 26/94 (27%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------------YSPSSPYNSGTSPDYSPSSP 443
YSP++ YSPTSP YSP SSP+ YSPSS S SP YSP+SP
Sbjct: 1555 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1614
Query: 442 QFSPST-GYSPSQPGYSPSSTS------QYTPKT 362
+SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1615 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1648
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1695 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1753
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1754 SIYSPSST-KYSP 1765
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F S
Sbjct: 1763 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1809
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 1465 SGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1524
Query: 406 PGYSPSS 386
P YSP+S
Sbjct: 1525 PNYSPTS 1531
[136][TOP]
>UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche
RepID=Q9XZS1_DROGU
Length = 1889
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T YSP+ P YS S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 388 STSQYTP 368
Y+P
Sbjct: 1740 --PHYSP 1744
Score = 85.9 bits (211), Expect = 2e-15
Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+S +YSP SPSYSP+SP+YSPSSP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1673 YSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPT 1732
Query: 388 S 386
S
Sbjct: 1733 S 1733
Score = 85.5 bits (210), Expect = 3e-15
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 13/90 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-------STGYSPSQ 407
YSPTSPSYSP+SPSYSP+SP YSP+SP S TSP+Y+P++P +SP S YSP+
Sbjct: 1687 YSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPAS 1746
Query: 406 PGYSPS------STSQYTPKTNDNKDDPGT 335
P YS + ++ Y+P + PG+
Sbjct: 1747 PAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 80.1 bits (196), Expect = 1e-13
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 6/75 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSAS 1638
Query: 403 GYSPSSTSQYTPKTN 359
GYSP+S Y+P +N
Sbjct: 1639 GYSPTS-PVYSPTSN 1652
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1816 TGSTYSATS-PRYSP 1829
Score = 76.3 bits (186), Expect = 2e-12
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 17/83 (20%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS---------------P 431
YSPTSPSYSPTSP+Y+P++P+YSP+SP N SP YSP+SP +S P
Sbjct: 1708 YSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQTGAKYSPTSPTYSPP 1766
Query: 430 STGY--SPSQPGYSPSSTSQYTP 368
S Y SP P Y+P S QY+P
Sbjct: 1767 SPSYDGSPGSPQYTPGS-PQYSP 1788
Score = 76.3 bits (186), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1802 PSSPQHSPS--NQYSP 1815
Score = 75.9 bits (185), Expect = 2e-12
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 445 PQFSPST-GYSPSQPGYSPSSTSQYTP 368
P ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 75.1 bits (183), Expect = 3e-12
Identities = 38/76 (50%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP+SP S +SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 1667 YSPGN-AYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP- 1724
Query: 388 STSQYTPKTNDNKDDP 341
+T Y+P + + P
Sbjct: 1725 ATPSYSPTSPNYSASP 1740
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1839 TKYSPTSPT-YTP 1850
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y+ SP + T+P+++P S +SPS +GYSP+ P YSP+S
Sbjct: 1595 SPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFP 1654
Query: 376 YTPK---TNDNKDDPG 338
+P + N PG
Sbjct: 1655 SSPSFAGSGSNMYSPG 1670
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP+ P YSP
Sbjct: 1820 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Query: 391 SS 386
SS
Sbjct: 1880 SS 1881
Score = 70.1 bits (170), Expect = 1e-10
Identities = 44/94 (46%), Positives = 52/94 (55%), Gaps = 26/94 (27%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------------YSPSSPYNSGTSPDYSPSSP 443
YSP++ YSPTSP YSP SSP+ YSPSS S SP YSP+SP
Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692
Query: 442 QFSPST-GYSPSQPGYSPSSTS------QYTPKT 362
+SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1831
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1832 SIYSPSST-KYSP 1843
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F S
Sbjct: 1841 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 59.7 bits (143), Expect = 1e-07
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 406 PGYSPSSTSQYTP 368
P YSP+S P
Sbjct: 1603 PNYSPTSPLYAAP 1615
[137][TOP]
>UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29IN2_DROPS
Length = 1889
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T YSP+ P YS S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 388 STSQYTP 368
Y+P
Sbjct: 1740 --PHYSP 1744
Score = 85.9 bits (211), Expect = 2e-15
Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+S +YSP SPSYSP+SP+YSPSSP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1673 YSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPT 1732
Query: 388 S 386
S
Sbjct: 1733 S 1733
Score = 85.5 bits (210), Expect = 3e-15
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 13/90 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-------STGYSPSQ 407
YSPTSPSYSP+SPSYSP+SP YSP+SP S TSP+Y+P++P +SP S YSP+
Sbjct: 1687 YSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPAS 1746
Query: 406 PGYSPS------STSQYTPKTNDNKDDPGT 335
P YS + ++ Y+P + PG+
Sbjct: 1747 PAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 80.5 bits (197), Expect = 8e-14
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 6/75 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSAS 1638
Query: 403 GYSPSSTSQYTPKTN 359
GYSP+S Y+P +N
Sbjct: 1639 GYSPTS-PVYSPTSN 1652
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1816 TGSTYSATS-PRYSP 1829
Score = 76.3 bits (186), Expect = 2e-12
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 17/83 (20%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS---------------P 431
YSPTSPSYSPTSP+Y+P++P+YSP+SP N SP YSP+SP +S P
Sbjct: 1708 YSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQTGAKYSPTSPTYSPP 1766
Query: 430 STGY--SPSQPGYSPSSTSQYTP 368
S Y SP P Y+P S QY+P
Sbjct: 1767 SPSYDGSPGSPQYTPGS-PQYSP 1788
Score = 76.3 bits (186), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1802 PSSPQHSPS--NQYSP 1815
Score = 75.9 bits (185), Expect = 2e-12
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 445 PQFSPST-GYSPSQPGYSPSSTSQYTP 368
P ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 75.1 bits (183), Expect = 3e-12
Identities = 38/76 (50%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP+SP S +SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 1667 YSPGN-AYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP- 1724
Query: 388 STSQYTPKTNDNKDDP 341
+T Y+P + + P
Sbjct: 1725 ATPSYSPTSPNYSASP 1740
Score = 73.2 bits (178), Expect = 1e-11
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y+ +SP + T+P+++P S +SPS +GYSP+ P YSP+S
Sbjct: 1595 SPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFP 1654
Query: 376 YTPK---TNDNKDDPG 338
+P + N PG
Sbjct: 1655 SSPSFAGSGSNMYSPG 1670
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1839 TKYSPTSPT-YTP 1850
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP+ P YSP
Sbjct: 1820 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Query: 391 SS 386
SS
Sbjct: 1880 SS 1881
Score = 70.1 bits (170), Expect = 1e-10
Identities = 44/94 (46%), Positives = 52/94 (55%), Gaps = 26/94 (27%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------------YSPSSPYNSGTSPDYSPSSP 443
YSP++ YSPTSP YSP SSP+ YSPSS S SP YSP+SP
Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692
Query: 442 QFSPST-GYSPSQPGYSPSSTS------QYTPKT 362
+SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1831
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1832 SIYSPSST-KYSP 1843
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F S
Sbjct: 1841 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 406 PGYSPSS 386
P YSP+S
Sbjct: 1603 PNYSPTS 1609
[138][TOP]
>UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4H2R8_DROPE
Length = 1804
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T YSP+ P YS S
Sbjct: 1614 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1673
Query: 388 STSQYTP 368
Y+P
Sbjct: 1674 --PHYSP 1678
Score = 85.9 bits (211), Expect = 2e-15
Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+S +YSP SPSYSP+SP+YSPSSP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1607 YSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPT 1666
Query: 388 S 386
S
Sbjct: 1667 S 1667
Score = 85.5 bits (210), Expect = 3e-15
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 13/90 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-------STGYSPSQ 407
YSPTSPSYSP+SPSYSP+SP YSP+SP S TSP+Y+P++P +SP S YSP+
Sbjct: 1621 YSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPAS 1680
Query: 406 PGYSPS------STSQYTPKTNDNKDDPGT 335
P YS + ++ Y+P + PG+
Sbjct: 1681 PAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1710
Score = 80.5 bits (197), Expect = 8e-14
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 6/75 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS
Sbjct: 1513 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSAS 1572
Query: 403 GYSPSSTSQYTPKTN 359
GYSP+S Y+P +N
Sbjct: 1573 GYSPTS-PVYSPTSN 1586
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1690 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1749
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1750 TGSTYSATS-PRYSP 1763
Score = 76.3 bits (186), Expect = 2e-12
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 17/83 (20%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS---------------P 431
YSPTSPSYSPTSP+Y+P++P+YSP+SP N SP YSP+SP +S P
Sbjct: 1642 YSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQTGAKYSPTSPTYSPP 1700
Query: 430 STGY--SPSQPGYSPSSTSQYTP 368
S Y SP P Y+P S QY+P
Sbjct: 1701 SPSYDGSPGSPQYTPGS-PQYSP 1722
Score = 76.3 bits (186), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1676 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1735
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1736 PSSPQHSPS--NQYSP 1749
Score = 75.1 bits (183), Expect = 3e-12
Identities = 38/76 (50%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP+SP S +SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 1601 YSPGN-AYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP- 1658
Query: 388 STSQYTPKTNDNKDDP 341
+T Y+P + + P
Sbjct: 1659 ATPSYSPTSPNYSASP 1674
Score = 73.2 bits (178), Expect = 1e-11
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y+ +SP + T+P+++P S +SPS +GYSP+ P YSP+S
Sbjct: 1529 SPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFP 1588
Query: 376 YTPK---TNDNKDDPG 338
+P + N PG
Sbjct: 1589 SSPSFAGSGSNMYSPG 1604
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1713 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1772
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1773 TKYSPTSPT-YTP 1784
Score = 70.1 bits (170), Expect = 1e-10
Identities = 44/94 (46%), Positives = 52/94 (55%), Gaps = 26/94 (27%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------------YSPSSPYNSGTSPDYSPSSP 443
YSP++ YSPTSP YSP SSP+ YSPSS S SP YSP+SP
Sbjct: 1567 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1626
Query: 442 QFSPST-GYSPSQPGYSPSSTS------QYTPKT 362
+SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1627 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1660
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1707 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1765
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1766 SIYSPSST-KYSP 1777
Score = 64.7 bits (156), Expect = 5e-09
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 21/80 (26%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1720 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1779
Query: 445 PQFSPST-GYSPSQPGYSPS 389
P ++P+ YSP+ YSP+
Sbjct: 1780 PTYTPTARNYSPTSLMYSPT 1799
Score = 57.8 bits (138), Expect = 6e-07
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+SP +SP S YSP+ TYS +SP S YSPSS ++SP S Y+P+ YSP+
Sbjct: 1734 YSPSSPQHSP-SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPT 1792
Query: 388 STSQYTP 368
S Y+P
Sbjct: 1793 SL-MYSP 1798
[139][TOP]
>UniRef100_A7AWJ0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AWJ0_BABBO
Length = 1746
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1616 YSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1675
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1676 SPA-YSP 1681
Score = 91.3 bits (225), Expect = 5e-17
Identities = 42/61 (68%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1623 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1682
Query: 388 S 386
S
Sbjct: 1683 S 1683
Score = 90.1 bits (222), Expect = 1e-16
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1609 YSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1668
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1669 SPA-YSP 1674
Score = 89.4 bits (220), Expect = 2e-16
Identities = 43/67 (64%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SP+YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1602 YSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1661
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1662 SPA-YSP 1667
Score = 89.4 bits (220), Expect = 2e-16
Identities = 42/69 (60%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST---GYSPSQPGYS 395
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP++ GY P+ P Y
Sbjct: 1637 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPAYR 1696
Query: 394 PSSTSQYTP 368
P+S + Y+P
Sbjct: 1697 PTSPA-YSP 1704
Score = 86.7 bits (213), Expect = 1e-15
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP--GYS 395
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+ P GY
Sbjct: 1630 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYL 1689
Query: 394 PSSTSQYTP 368
P+S + Y P
Sbjct: 1690 PTSPA-YRP 1697
Score = 85.1 bits (209), Expect = 3e-15
Identities = 44/79 (55%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQFSP-STGYSPSQPGY 398
YSPTSP+YSPTSP+YSP+SP YSP+SP N G TSP Y P+SP +SP S YSP+ P Y
Sbjct: 1658 YSPTSPAYSPTSPAYSPTSPAYSPTSP-NLGYLPTSPAYRPTSPAYSPTSPAYSPTSPAY 1716
Query: 397 SPSSTSQYTPKTNDNKDDP 341
SP+S + +DP
Sbjct: 1717 SPTSPVYSPTSPEYSPEDP 1735
Score = 84.3 bits (207), Expect = 6e-15
Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS---PSTGYSPSQPGYS 395
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP S Y P+ P YS
Sbjct: 1644 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSPAYS 1703
Query: 394 PSSTSQYTP 368
P+S + Y+P
Sbjct: 1704 PTSPA-YSP 1711
Score = 82.4 bits (202), Expect = 2e-14
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSY-------SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP Y SP SP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1588 YSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPT 1647
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1648 SPAYSPTSPA-YSP 1660
Score = 80.5 bits (197), Expect = 8e-14
Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSY-------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 407
SPTSP YSPTSP Y SP+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1582 SPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTS 1641
Query: 406 PGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1642 PAYSPTSPA-YSP 1653
Score = 78.6 bits (192), Expect = 3e-13
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYS 395
YSPTSP+YSPTSP+ Y P+SP Y P+SP S TSP YSP+SP +SP++ YSP+ P YS
Sbjct: 1672 YSPTSPAYSPTSPNLGYLPTSPAYRPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPEYS 1731
Query: 394 PSSTSQYTP 368
P P
Sbjct: 1732 PEDPFSPNP 1740
Score = 69.7 bits (169), Expect = 1e-10
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 407
SP+ SPTSP YSP+SP YSP+SP S TSP YSP+SP +SP S YSP+
Sbjct: 1575 SPSMGMMSPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTS 1634
Query: 406 PGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1635 PAYSPTSPA-YSP 1646
[140][TOP]
>UniRef100_Q5EXZ8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Periplaneta
americana RepID=Q5EXZ8_PERAM
Length = 97
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP+SPSYSPTSP+YSP+SP YSPSS S TSP Y+P+SP +SPS+ YSP+ PGYSP+
Sbjct: 23 YSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTPTSPNYSPSSPTYSPAVPGYSPT 82
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 83 SPT-YSP 88
Score = 84.7 bits (208), Expect = 4e-15
Identities = 45/75 (60%), Positives = 54/75 (72%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS--------YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSP 413
YSPTSPSYSP+SP YSPSSP+YSP+SP S TSP YSPSS ++SP S Y+P
Sbjct: 1 YSPTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTP 60
Query: 412 SQPGYSPSSTSQYTP 368
+ P YSPSS + Y+P
Sbjct: 61 TSPNYSPSSPT-YSP 74
Score = 73.6 bits (179), Expect = 1e-11
Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS----PSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPG 401
YSPTSP+YSPTSP YS YSP+SP + TSP+YSPSSP +SP+ GYSP+ P
Sbjct: 30 YSPTSPTYSPTSPQYSPSSS----KYSPTSPTYTPTSPNYSPSSPTYSPAVPGYSPTSPT 85
Query: 400 YSPSS 386
YSP+S
Sbjct: 86 YSPTS 90
Score = 71.2 bits (173), Expect = 5e-11
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 437
YSPTSP+Y+PTSP+YSPSSPTYSP+ P S TSP YSP+SP +
Sbjct: 51 YSPTSPTYTPTSPNYSPSSPTYSPAVPGYSPTSPTYSPTSPAY 93
[141][TOP]
>UniRef100_C6F0A2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A2_PLAFA
Length = 223
Score = 90.9 bits (224), Expect = 6e-17
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 47 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 106
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 107 S-PKYSP 112
Score = 87.4 bits (215), Expect = 7e-16
Identities = 43/67 (64%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 40 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 99
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 100 S-PKYSP 105
Score = 84.3 bits (207), Expect = 6e-15
Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P
Sbjct: 68 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNI 127
Query: 388 STSQYTP 368
++ Y+P
Sbjct: 128 ASPNYSP 134
Score = 81.3 bits (199), Expect = 5e-14
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP++ + + P YSP
Sbjct: 75 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSP 134
Query: 391 SS 386
S
Sbjct: 135 YS 136
Score = 79.7 bits (195), Expect = 1e-13
Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+ SP YS TSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 33 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 92
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 93 S-PKYSP 98
Score = 78.6 bits (192), Expect = 3e-13
Identities = 42/68 (61%), Positives = 49/68 (72%), Gaps = 8/68 (11%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSPTSP YSPTSP YS P+SP YSP+SP S TSP YSP+SP++SP S YSP+
Sbjct: 54 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 113
Query: 409 QPGYSPSS 386
P YSP+S
Sbjct: 114 SPKYSPTS 121
Score = 60.8 bits (146), Expect = 7e-08
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 19/78 (24%)
Frame = -3
Query: 544 YSPTSPSYSPSSPTYSPSSPYN------------------SGTSPDYSPSSPQFSP-STG 422
YSPTSP+Y+ ++ YSP+SP N S TSP YSP+SP++SP S
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S +Y+P
Sbjct: 61 YSPTSPKYSPTS-PKYSP 77
Score = 60.8 bits (146), Expect = 7e-08
Identities = 37/84 (44%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSPDYSPSSPQFSPS--- 428
YSPTSP YSPTSP YSP+SP YS +SP S TSP YS SSP + S
Sbjct: 103 YSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKSGVV 162
Query: 427 TGYSPSQPGYSPSSTSQYTPKTND 356
+ P P Y S Q D
Sbjct: 163 NAHQPMSPAYILQSPVQIKQNVQD 186
[142][TOP]
>UniRef100_C6F1F2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F2_9APIC
Length = 232
Score = 90.1 bits (222), Expect = 1e-16
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP Y P+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 63 YSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 122
Query: 388 STSQYTP 368
S QY+P
Sbjct: 123 S-PQYSP 128
Score = 88.2 bits (217), Expect = 4e-16
Identities = 42/69 (60%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP Y PTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 70 YSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPT 129
Query: 388 STSQYTPKT 362
S P +
Sbjct: 130 SPVPNNPSS 138
Score = 85.5 bits (210), Expect = 3e-15
Identities = 40/60 (66%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY--SPSQPGYSP 392
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP++ +PS P YSP
Sbjct: 84 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSP 143
Score = 85.1 bits (209), Expect = 3e-15
Identities = 42/67 (62%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS TSP YSPTSP YSP+SP Y P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 115
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 116 S-PKYSP 121
Score = 77.0 bits (188), Expect = 9e-13
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+S SP YS TSP YSP+SP YSP+SP TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 108
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 109 S-PKYSP 114
Score = 62.4 bits (150), Expect = 2e-08
Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQFSP-STGYSPSQPGY 398
YSPTSP YSPTSP YSP+SP P++P +SP YSP +SP+FSP S YS S P Y
Sbjct: 112 YSPTSPKYSPTSPQYSPTSPV--PNNP----SSPHYSPYAIASPKFSPTSPAYSISSPVY 165
Query: 397 SPSSTSQ 377
S ++
Sbjct: 166 DQSGNAR 172
[143][TOP]
>UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PY98_DROYA
Length = 1889
Score = 90.1 bits (222), Expect = 1e-16
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T YSP+ P YS S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739
Query: 388 STSQYTP 368
Y+P
Sbjct: 1740 --PHYSP 1744
Score = 84.7 bits (208), Expect = 4e-15
Identities = 40/61 (65%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+S +YSP SPSYSP+SP+YSPSSP S TSP YSP+SP +SP S Y+P P YSP+
Sbjct: 1673 YSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPT 1732
Query: 388 S 386
S
Sbjct: 1733 S 1733
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 13/90 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-------YSPSSPQFSPSTGYSPSQ 407
YSPTSPSYSP+SPSYSP+SP YSP+SP S TSP+ YSP+SP +S S YSP+
Sbjct: 1687 YSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPAS 1746
Query: 406 PGYSPS------STSQYTPKTNDNKDDPGT 335
P YS + ++ Y+P + PG+
Sbjct: 1747 PAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 80.1 bits (196), Expect = 1e-13
Identities = 41/75 (54%), Positives = 53/75 (70%), Gaps = 6/75 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSS 1638
Query: 403 GYSPSSTSQYTPKTN 359
GYSP+S Y+P N
Sbjct: 1639 GYSPTS-PVYSPTPN 1652
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1816 TGSTYSATS-PRYSP 1829
Score = 75.9 bits (185), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1802 PSSPQHSPS--NQYSP 1815
Score = 75.9 bits (185), Expect = 2e-12
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 445 PQFSPST-GYSPSQPGYSPSSTSQYTP 368
P ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 73.9 bits (180), Expect = 8e-12
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP+SP S +SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 1667 YSPGN-AYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP- 1724
Query: 388 STSQYTPKTNDNKDDP 341
T Y+P + + P
Sbjct: 1725 VTPSYSPTSPNYSASP 1740
Score = 73.6 bits (179), Expect = 1e-11
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 23/89 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--------------------TSPDYSPSS 446
YSPTSPSYSPTSP+Y+P +P+YSP+SP S TSP YSP S
Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767
Query: 445 PQFSPSTG---YSPSQPGYSPSSTSQYTP 368
P + S G Y+P P YSP+S +Y+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPAS-PKYSP 1795
Score = 72.8 bits (177), Expect = 2e-11
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y+ +SP + T+P+++P S +SP S+GYSP+ P YSP+ Q
Sbjct: 1595 SPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTPNFQ 1654
Query: 376 YTP 368
+P
Sbjct: 1655 SSP 1657
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1839 TKYSPTSPT-YTP 1850
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP+ P YSP
Sbjct: 1820 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Query: 391 SS 386
SS
Sbjct: 1880 SS 1881
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1831
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1832 SIYSPSST-KYSP 1843
Score = 66.6 bits (161), Expect = 1e-09
Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 14/80 (17%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------YSPSSPYNSGTSPDYSPSSPQFSP-S 428
YSP+S YSPTSP YSP SSP+ YSP + Y S +S +YSP+SP +SP S
Sbjct: 1633 YSPSSSGYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAY-SPSSSNYSPNSPSYSPTS 1691
Query: 427 TGYSPSQPGYSPSSTSQYTP 368
YSPS P YSP+S Y+P
Sbjct: 1692 PSYSPSSPSYSPTSPC-YSP 1710
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F S
Sbjct: 1841 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 406 PGYSPSS 386
P YSP+S
Sbjct: 1603 PNYSPTS 1609
[144][TOP]
>UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NUC1_DROER
Length = 1889
Score = 90.1 bits (222), Expect = 1e-16
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T YSP+ P YS S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739
Query: 388 STSQYTP 368
Y+P
Sbjct: 1740 --PHYSP 1744
Score = 84.7 bits (208), Expect = 4e-15
Identities = 40/61 (65%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+S +YSP SPSYSP+SP+YSPSSP S TSP YSP+SP +SP S Y+P P YSP+
Sbjct: 1673 YSPSSANYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPT 1732
Query: 388 S 386
S
Sbjct: 1733 S 1733
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 13/90 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-------YSPSSPQFSPSTGYSPSQ 407
YSPTSPSYSP+SPSYSP+SP YSP+SP S TSP+ YSP+SP +S S YSP+
Sbjct: 1687 YSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPAS 1746
Query: 406 PGYSPS------STSQYTPKTNDNKDDPGT 335
P YS + ++ Y+P + PG+
Sbjct: 1747 PAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1816 TGSTYSATS-PRYSP 1829
Score = 78.6 bits (192), Expect = 3e-13
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 6/66 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSS 1638
Query: 403 GYSPSS 386
GYSP+S
Sbjct: 1639 GYSPTS 1644
Score = 75.9 bits (185), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1802 PSSPQHSPS--NQYSP 1815
Score = 75.9 bits (185), Expect = 2e-12
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 445 PQFSPST-GYSPSQPGYSPSSTSQYTP 368
P ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 74.7 bits (182), Expect = 4e-12
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP+SP S +SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 1667 YSPAN-AYSPSSANYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP- 1724
Query: 388 STSQYTPKTNDNKDDP 341
T Y+P + + P
Sbjct: 1725 VTPSYSPTSPNYSASP 1740
Score = 73.6 bits (179), Expect = 1e-11
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 23/89 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--------------------TSPDYSPSS 446
YSPTSPSYSPTSP+Y+P +P+YSP+SP S TSP YSP S
Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767
Query: 445 PQFSPSTG---YSPSQPGYSPSSTSQYTP 368
P + S G Y+P P YSP+S +Y+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPAS-PKYSP 1795
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1839 TKYSPTSPT-YTP 1850
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP+ P YSP
Sbjct: 1820 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Query: 391 SS 386
SS
Sbjct: 1880 SS 1881
Score = 72.0 bits (175), Expect = 3e-11
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y+ +SP + T+P+++P S +SP S+GYSP+ P YSP+ Q
Sbjct: 1595 SPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTPHFQ 1654
Query: 376 YTP 368
+P
Sbjct: 1655 SSP 1657
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1831
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1832 SIYSPSST-KYSP 1843
Score = 67.0 bits (162), Expect = 9e-10
Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 14/80 (17%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------YSPSSPYNSGTSPDYSPSSPQFSP-S 428
YSP+S YSPTSP YSP SSP+ YSP++ Y S +S +YSP+SP +SP S
Sbjct: 1633 YSPSSSGYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPANAY-SPSSANYSPNSPSYSPTS 1691
Query: 427 TGYSPSQPGYSPSSTSQYTP 368
YSPS P YSP+S Y+P
Sbjct: 1692 PSYSPSSPSYSPTSPC-YSP 1710
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F S
Sbjct: 1841 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 406 PGYSPSS 386
P YSP+S
Sbjct: 1603 PNYSPTS 1609
[145][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MQ29_DROAN
Length = 1889
Score = 90.1 bits (222), Expect = 1e-16
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T YSP+ P YS S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739
Query: 388 STSQYTP 368
Y+P
Sbjct: 1740 --PHYSP 1744
Score = 84.7 bits (208), Expect = 4e-15
Identities = 40/61 (65%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+S +YSP SPSYSP+SP+YSPSSP S TSP YSP+SP +SP S Y+P P YSP+
Sbjct: 1673 YSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPT 1732
Query: 388 S 386
S
Sbjct: 1733 S 1733
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 13/90 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-------YSPSSPQFSPSTGYSPSQ 407
YSPTSPSYSP+SPSYSP+SP YSP+SP S TSP+ YSP+SP +S S YSP+
Sbjct: 1687 YSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPAS 1746
Query: 406 PGYSPS------STSQYTPKTNDNKDDPGT 335
P YS + ++ Y+P + PG+
Sbjct: 1747 PAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 82.0 bits (201), Expect = 3e-14
Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 6/75 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSP+Y+ +SP +YSPSSP YSP+SP + TSP Y+ ++P F+P STGYSPS
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSS 1638
Query: 403 GYSPSSTSQYTPKTN 359
GYSP+S Y+P +N
Sbjct: 1639 GYSPTS-PVYSPTSN 1652
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1816 TGSTYSATS-PRYSP 1829
Score = 75.9 bits (185), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1802 PSSPQHSPS--NQYSP 1815
Score = 75.9 bits (185), Expect = 2e-12
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 445 PQFSPST-GYSPSQPGYSPSSTSQYTP 368
P ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 75.5 bits (184), Expect = 3e-12
Identities = 36/76 (47%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y+ +SP + T+P+++P S +SP S+GYSP+ P YSP+S Q
Sbjct: 1595 SPNYSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQ 1654
Query: 376 YTPK---TNDNKDDPG 338
+P + N PG
Sbjct: 1655 SSPSFAGSGSNMYSPG 1670
Score = 73.9 bits (180), Expect = 8e-12
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP+SP S +SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 1667 YSPGN-AYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP- 1724
Query: 388 STSQYTPKTNDNKDDP 341
T Y+P + + P
Sbjct: 1725 VTPSYSPTSPNYSASP 1740
Score = 73.6 bits (179), Expect = 1e-11
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 23/89 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--------------------TSPDYSPSS 446
YSPTSPSYSPTSP+Y+P +P+YSP+SP S TSP YSP S
Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767
Query: 445 PQFSPSTG---YSPSQPGYSPSSTSQYTP 368
P + S G Y+P P YSP+S +Y+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPAS-PKYSP 1795
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1839 TKYSPTSPT-YTP 1850
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP+ P YSP
Sbjct: 1820 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Query: 391 SS 386
SS
Sbjct: 1880 SS 1881
Score = 70.9 bits (172), Expect = 6e-11
Identities = 45/94 (47%), Positives = 52/94 (55%), Gaps = 26/94 (27%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------------YSPSSPYNSGTSPDYSPSSP 443
YSP+S YSPTSP YSP SSP+ YSPSS S SP YSP+SP
Sbjct: 1633 YSPSSSGYSPTSPVYSPTSNYQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPTSP 1692
Query: 442 QFSPST-GYSPSQPGYSPSSTS------QYTPKT 362
+SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1831
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1832 SIYSPSST-KYSP 1843
Score = 65.1 bits (157), Expect = 4e-09
Identities = 29/66 (43%), Positives = 45/66 (68%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP Y+ TSP Y+ ++P ++P S S +S YSP+SP +SP++ Y S P ++ S
Sbjct: 1605 YSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQ-SSPSFAGSG 1663
Query: 385 TSQYTP 368
++ Y+P
Sbjct: 1664 SNMYSP 1669
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F S
Sbjct: 1841 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 406 PGYSPSS 386
P YSP+S
Sbjct: 1603 PNYSPTS 1609
[146][TOP]
>UniRef100_Q84KP6 DNA-directed RNA polymerase n=1 Tax=Cyanidioschyzon merolae
RepID=Q84KP6_CYAME
Length = 1819
Score = 89.7 bits (221), Expect = 1e-16
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 6/74 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST---GYSPSQP--G 401
YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SPS+ YSPS P
Sbjct: 1651 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSPNVA 1710
Query: 400 YSPSSTS-QYTPKT 362
YSPSS + Y+P +
Sbjct: 1711 YSPSSPNVAYSPSS 1724
Score = 87.0 bits (214), Expect = 9e-16
Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP--GYSP 392
SPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSPS P YSP
Sbjct: 1645 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSP 1704
Query: 391 SSTS-QYTPKT 362
SS + Y+P +
Sbjct: 1705 SSPNVAYSPSS 1715
Score = 83.2 bits (204), Expect = 1e-14
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 10/78 (12%)
Frame = -3
Query: 565 YSPTSPSY--------SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSP 413
+SP+SP+Y SPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YSP
Sbjct: 1629 FSPSSPAYSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1688
Query: 412 SQPGYSPSSTS-QYTPKT 362
+ P YSPSS + Y+P +
Sbjct: 1689 TSPAYSPSSPNVAYSPSS 1706
Score = 68.2 bits (165), Expect = 4e-10
Identities = 47/115 (40%), Positives = 56/115 (48%), Gaps = 47/115 (40%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP------------------------------YN- 479
YSPTSP+YSPTSP+YSP+SP YSPSSP Y+
Sbjct: 1672 YSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSP 1731
Query: 478 -------SGTSPD--YSPSSPQF-----SPSTGYSPSQPG--YSPSSTSQYTPKT 362
S +SP+ YSPSSP SP+ YSPS P YSPSS Y+P +
Sbjct: 1732 SSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSS 1786
Score = 67.0 bits (162), Expect = 9e-10
Identities = 46/88 (52%), Positives = 53/88 (60%), Gaps = 20/88 (22%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPD-----YSPSSPQF----- 437
YSPTSP+YSPTSP+YS P+SP YSPSSP N SP YSPSSP
Sbjct: 1665 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSP-NVAYSPSSPNVAYSPSSPNVAYSPS 1723
Query: 436 SPSTGYSPSQP--GYSPSSTS-QYTPKT 362
SP+ YSPS P YSPSS + Y+P +
Sbjct: 1724 SPNVAYSPSSPNVAYSPSSPNVAYSPSS 1751
Score = 67.0 bits (162), Expect = 9e-10
Identities = 43/81 (53%), Positives = 52/81 (64%), Gaps = 14/81 (17%)
Frame = -3
Query: 565 YSPTSPS--YSPTSPS--YSPSSPT--YSPSSP---YNSGTSPDYSPSSPQF-----SPS 428
YSP+SP+ YSP+SP+ YSPSSP YSPSSP Y+ + YSPSSP SP+
Sbjct: 1738 YSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSSPNVAYSPSSPN 1797
Query: 427 TGYSPSQPGYSPSSTSQYTPK 365
YSPS P +SPSS Y+PK
Sbjct: 1798 VAYSPSSPAFSPSS-PVYSPK 1817
Score = 64.3 bits (155), Expect = 6e-09
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 10/75 (13%)
Frame = -3
Query: 562 SPTSPSYSP--------TSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSP-STGYSP 413
S T+P+++P T ++SPSSP YSP+SP S TSP YSP+SP +SP S YSP
Sbjct: 1608 SATTPNWAPSPAGGGTGTLGAFSPSSPAYSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSP 1667
Query: 412 SQPGYSPSSTSQYTP 368
+ P YSP+S + Y+P
Sbjct: 1668 TSPAYSPTSPA-YSP 1681
Score = 56.6 bits (135), Expect = 1e-06
Identities = 39/69 (56%), Positives = 47/69 (68%), Gaps = 9/69 (13%)
Frame = -3
Query: 565 YSPTSPS--YSPTSPS--YSPSSPT-YSPSSPY--NSGTSPD--YSPSSPQFSPSTGYSP 413
YSP+SP+ YSP+SP+ YSPSSP YSPSSP S +SP+ YSPSSP FSPS+
Sbjct: 1756 YSPSSPNVAYSPSSPNVAYSPSSPVAYSPSSPNVAYSPSSPNVAYSPSSPAFSPSS---- 1811
Query: 412 SQPGYSPSS 386
P YSP +
Sbjct: 1812 --PVYSPKN 1818
[147][TOP]
>UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura
RepID=Q9XZU9_DROSU
Length = 1889
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSPTSPSYSPSSP+YSP+SP S +SP YSP+SP ++P+T YSP+ P YS S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 388 STSQYTP 368
Y+P
Sbjct: 1740 --PHYSP 1744
Score = 87.0 bits (214), Expect = 9e-16
Identities = 41/61 (67%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+S +YSP SPSYSP+SP+YSPSSP S TSP YSPSSP +SP S Y+P+ P YSP+
Sbjct: 1673 YSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPT 1732
Query: 388 S 386
S
Sbjct: 1733 S 1733
Score = 86.7 bits (213), Expect = 1e-15
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 13/90 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-------STGYSPSQ 407
YSPTSPSYSP+SPSYSP+SP YSPSSP S TSP+Y+P++P +SP S YSP+
Sbjct: 1687 YSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPAS 1746
Query: 406 PGYSPS------STSQYTPKTNDNKDDPGT 335
P YS + ++ Y+P + PG+
Sbjct: 1747 PAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 80.1 bits (196), Expect = 1e-13
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 6/75 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSAS 1638
Query: 403 GYSPSSTSQYTPKTN 359
GYSP+S Y+P +N
Sbjct: 1639 GYSPTS-PVYSPTSN 1652
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1816 TGSTYSATS-PRYSP 1829
Score = 76.3 bits (186), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1802 PSSPQHSPS--NQYSP 1815
Score = 75.9 bits (185), Expect = 2e-12
Identities = 38/76 (50%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP+SP S +SP YSP+SP +SPS+ YSP+ P Y+P
Sbjct: 1667 YSPGN-AYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTP- 1724
Query: 388 STSQYTPKTNDNKDDP 341
+T Y+P + + P
Sbjct: 1725 ATPSYSPTSPNYSASP 1740
Score = 75.9 bits (185), Expect = 2e-12
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 445 PQFSPST-GYSPSQPGYSPSSTSQYTP 368
P ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 74.7 bits (182), Expect = 4e-12
Identities = 41/83 (49%), Positives = 52/83 (62%), Gaps = 17/83 (20%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS---------------P 431
YSP+SPSYSPTSP+Y+P++P+YSP+SP N SP YSP+SP +S P
Sbjct: 1708 YSPSSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQTGAKYSPTSPTYSPP 1766
Query: 430 STGY--SPSQPGYSPSSTSQYTP 368
S Y SP P Y+P S QY+P
Sbjct: 1767 SPSYDGSPGSPQYTPGS-PQYSP 1788
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1839 TKYSPTSPT-YTP 1850
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y+ SP + T+P+++P S +SPS +GYSP+ P YSP+S
Sbjct: 1595 SPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFP 1654
Query: 376 YTPK---TNDNKDDPG 338
+P + N PG
Sbjct: 1655 SSPSFAGSGSNMYSPG 1670
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP+ P YSP
Sbjct: 1820 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Query: 391 SS 386
SS
Sbjct: 1880 SS 1881
Score = 71.2 bits (173), Expect = 5e-11
Identities = 45/94 (47%), Positives = 52/94 (55%), Gaps = 26/94 (27%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------------YSPSSPYNSGTSPDYSPSSP 443
YSP++ YSPTSP YSP SSP+ YSPSS S SP YSP+SP
Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692
Query: 442 QFSPST-GYSPSQPGYSPSSTS------QYTPKT 362
+SPS+ YSP+ P YSPSS S YTP T
Sbjct: 1693 SYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPAT 1726
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1831
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1832 SIYSPSST-KYSP 1843
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F S
Sbjct: 1841 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 59.7 bits (143), Expect = 1e-07
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 406 PGYSPSSTSQYTP 368
P YSP+S P
Sbjct: 1603 PNYSPTSPLYAAP 1615
[148][TOP]
>UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis
RepID=Q9XZS2_DROMD
Length = 1889
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/67 (64%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSPTSPSYSPSSP+YSP+SP S +SP YSP+SP ++P+T YSP+ P YS S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 388 STSQYTP 368
Y+P
Sbjct: 1740 --PHYSP 1744
Score = 87.0 bits (214), Expect = 9e-16
Identities = 41/61 (67%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+S +YSP SPSYSP+SP+YSPSSP S TSP YSPSSP +SP S Y+P+ P YSP+
Sbjct: 1673 YSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPT 1732
Query: 388 S 386
S
Sbjct: 1733 S 1733
Score = 86.7 bits (213), Expect = 1e-15
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 13/90 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-------STGYSPSQ 407
YSPTSPSYSP+SPSYSP+SP YSPSSP S TSP+Y+P++P +SP S YSP+
Sbjct: 1687 YSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPAS 1746
Query: 406 PGYSPS------STSQYTPKTNDNKDDPGT 335
P YS + ++ Y+P + PG+
Sbjct: 1747 PAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 80.1 bits (196), Expect = 1e-13
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 6/75 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P F+P STGYSPS
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSAS 1638
Query: 403 GYSPSSTSQYTPKTN 359
GYSP+S Y+P +N
Sbjct: 1639 GYSPTS-PVYSPTSN 1652
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1816 TGSTYSATS-PRYSP 1829
Score = 76.3 bits (186), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1802 PSSPQHSPS--NQYSP 1815
Score = 75.9 bits (185), Expect = 2e-12
Identities = 38/76 (50%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP+SP S +SP YSP+SP +SPS+ YSP+ P Y+P
Sbjct: 1667 YSPGN-AYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTP- 1724
Query: 388 STSQYTPKTNDNKDDP 341
+T Y+P + + P
Sbjct: 1725 ATPSYSPTSPNYSASP 1740
Score = 75.9 bits (185), Expect = 2e-12
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 445 PQFSPST-GYSPSQPGYSPSSTSQYTP 368
P ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 74.7 bits (182), Expect = 4e-12
Identities = 41/83 (49%), Positives = 52/83 (62%), Gaps = 17/83 (20%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS---------------P 431
YSP+SPSYSPTSP+Y+P++P+YSP+SP N SP YSP+SP +S P
Sbjct: 1708 YSPSSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQTGAKYSPTSPTYSPP 1766
Query: 430 STGY--SPSQPGYSPSSTSQYTP 368
S Y SP P Y+P S QY+P
Sbjct: 1767 SPSYDGSPGSPQYTPGS-PQYSP 1788
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1839 TKYSPTSPT-YTP 1850
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y+ SP + T+P+++P S +SPS +GYSP+ P YSP+S
Sbjct: 1595 SPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFP 1654
Query: 376 YTPK---TNDNKDDPG 338
+P + N PG
Sbjct: 1655 SSPSFAGSGSNMYSPG 1670
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP+ P YSP
Sbjct: 1820 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Query: 391 SS 386
SS
Sbjct: 1880 SS 1881
Score = 71.2 bits (173), Expect = 5e-11
Identities = 45/94 (47%), Positives = 52/94 (55%), Gaps = 26/94 (27%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------------YSPSSPYNSGTSPDYSPSSP 443
YSP++ YSPTSP YSP SSP+ YSPSS S SP YSP+SP
Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692
Query: 442 QFSPST-GYSPSQPGYSPSSTS------QYTPKT 362
+SPS+ YSP+ P YSPSS S YTP T
Sbjct: 1693 SYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPAT 1726
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1831
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1832 SIYSPSST-KYSP 1843
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F S
Sbjct: 1841 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 59.7 bits (143), Expect = 1e-07
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 406 PGYSPSSTSQYTP 368
P YSP+S P
Sbjct: 1603 PNYSPTSPLYAAP 1615
[149][TOP]
>UniRef100_O77375 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O77375_PLAF7
Length = 2457
Score = 89.7 bits (221), Expect = 1e-16
Identities = 42/61 (68%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 2295 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2354
Query: 388 S 386
S
Sbjct: 2355 S 2355
Score = 87.4 bits (215), Expect = 7e-16
Identities = 43/67 (64%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 2288 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2347
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 2348 S-PKYSP 2353
Score = 81.3 bits (199), Expect = 5e-14
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP++ + + P YSP
Sbjct: 2309 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSP 2368
Query: 391 SS 386
S
Sbjct: 2369 YS 2370
Score = 79.7 bits (195), Expect = 1e-13
Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+ SP YS TSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 2281 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2340
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 2341 S-PKYSP 2346
Score = 66.6 bits (161), Expect = 1e-09
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 19/81 (23%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYN------------------SGTSPDYSPSSPQFSP- 431
SPSYSPTSP+Y+ ++ YSP+SP N S TSP YSP+SP++SP
Sbjct: 2246 SPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPT 2305
Query: 430 STGYSPSQPGYSPSSTSQYTP 368
S YSP+ P YSP+S +Y+P
Sbjct: 2306 SPKYSPTSPKYSPTS-PKYSP 2325
Score = 60.8 bits (146), Expect = 7e-08
Identities = 37/84 (44%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSPDYSPSSPQFSPS--- 428
YSPTSP YSPTSP YSP+SP YS +SP S TSP YS SSP + S
Sbjct: 2337 YSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKSGVV 2396
Query: 427 TGYSPSQPGYSPSSTSQYTPKTND 356
+ P P Y S Q D
Sbjct: 2397 NAHQPMSPAYILQSPVQIKQNVQD 2420
[150][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4NDK9_DROWI
Length = 1890
Score = 89.0 bits (219), Expect = 2e-16
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
Y+P SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T YSP+ P YS S
Sbjct: 1681 YTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1740
Query: 388 STSQYTP 368
Y+P
Sbjct: 1741 --PHYSP 1745
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 13/90 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-------YSPSSPQFSPSTGYSPSQ 407
YSPTSPSYSP+SPSYSP+SP YSP+SP S TSP+ YSP+SP +S S YSP+
Sbjct: 1688 YSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPAS 1747
Query: 406 PGYSPS------STSQYTPKTNDNKDDPGT 335
P YS + ++ Y+P + PG+
Sbjct: 1748 PAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1777
Score = 83.6 bits (205), Expect = 1e-14
Identities = 39/61 (63%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+S +Y+P SPSYSP+SP+YSPSSP S TSP YSP+SP +SP S Y+P P YSP+
Sbjct: 1674 YSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPT 1733
Query: 388 S 386
S
Sbjct: 1734 S 1734
Score = 80.5 bits (197), Expect = 8e-14
Identities = 42/76 (55%), Positives = 54/76 (71%), Gaps = 7/76 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-PSTGYSPSQ 407
YSPTSP+Y+ +SPS YSPSSP YSP+SP + TSP Y+ ++P F+ STGYSPS
Sbjct: 1579 YSPTSPNYTASSPSGGASPNYSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSS 1638
Query: 406 PGYSPSSTSQYTPKTN 359
GYSP+S Y+P +N
Sbjct: 1639 SGYSPTS-PVYSPTSN 1653
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1757 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1816
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1817 TGSTYSATS-PRYSP 1830
Score = 75.9 bits (185), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1743 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1802
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1803 PSSPQHSPS--NQYSP 1816
Score = 75.9 bits (185), Expect = 2e-12
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1787 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1846
Query: 445 PQFSPST-GYSPSQPGYSPSSTSQYTP 368
P ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1847 PTYTPTARNYSPTSPMYSPTAPSHYSP 1873
Score = 73.6 bits (179), Expect = 1e-11
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 23/89 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--------------------TSPDYSPSS 446
YSPTSPSYSPTSP+Y+P +P+YSP+SP S TSP YSP S
Sbjct: 1709 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1768
Query: 445 PQFSPSTG---YSPSQPGYSPSSTSQYTP 368
P + S G Y+P P YSP+S +Y+P
Sbjct: 1769 PSYDGSPGSPQYTPGSPQYSPAS-PKYSP 1796
Score = 72.8 bits (177), Expect = 2e-11
Identities = 37/76 (48%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +Y+P+SP+YSP+SP S +SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 1668 YSPGN-AYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP- 1725
Query: 388 STSQYTPKTNDNKDDP 341
T Y+P + + P
Sbjct: 1726 VTPSYSPTSPNYSASP 1741
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1780 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1839
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1840 TKYSPTSPT-YTP 1851
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP+ P YSP
Sbjct: 1821 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1880
Query: 391 SS 386
SS
Sbjct: 1881 SS 1882
Score = 71.6 bits (174), Expect = 4e-11
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y+ +SP + T+P+++ S +SP S+GYSP+ P YSP+S Q
Sbjct: 1596 SPNYSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSSSGYSPTSPVYSPTSNFQ 1655
Query: 376 YTPK---TNDNKDDPG 338
+P + N PG
Sbjct: 1656 SSPSFAGSGSNMYSPG 1671
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1774 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1832
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1833 SIYSPSST-KYSP 1844
Score = 69.7 bits (169), Expect = 1e-10
Identities = 44/94 (46%), Positives = 52/94 (55%), Gaps = 26/94 (27%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------------YSPSSPYNSGTSPDYSPSSP 443
YSP+S YSPTSP YSP SSP+ YSPSS + SP YSP+SP
Sbjct: 1634 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSP 1693
Query: 442 QFSPST-GYSPSQPGYSPSSTS------QYTPKT 362
+SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1694 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1727
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F S
Sbjct: 1842 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1888
Score = 60.1 bits (144), Expect = 1e-07
Identities = 35/68 (51%), Positives = 41/68 (60%), Gaps = 9/68 (13%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQF---SPSTG----YSPS 410
S SPS+SP P SPSSP + SP P + SP YSP+SP + SPS G YSPS
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPTSPSVSPSYSPTSPNYTASSPSGGASPNYSPS 1602
Query: 409 QPGYSPSS 386
P YSP+S
Sbjct: 1603 SPNYSPTS 1610
[151][TOP]
>UniRef100_C6HNU4 DNA-directed RNA polymerase II n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HNU4_AJECH
Length = 668
Score = 89.0 bits (219), Expect = 2e-16
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 12/87 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG------------ 422
YSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP STG
Sbjct: 557 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK 616
Query: 421 YSPSQPGYSPSSTSQYTPKTNDNKDDP 341
Y+P+ PG+SP+S Y+P + + P
Sbjct: 617 YTPTSPGWSPTSPETYSPTSPNFSGSP 643
Score = 85.1 bits (209), Expect = 3e-15
Identities = 41/63 (65%), Positives = 51/63 (80%), Gaps = 3/63 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
++PTSP+YSPTSPSY SP+SP+YSP+SP S TSP YSP+SP FSP S +SP+ P YS
Sbjct: 534 FAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYS 593
Query: 394 PSS 386
P+S
Sbjct: 594 PTS 596
Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/69 (55%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
+SP SP+++PTSP+YSP+SP+Y SP+SP S TSP +SP+SP +SP S +SP+ P +S
Sbjct: 527 FSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFS 586
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 587 PTSPS-YSP 594
Score = 70.9 bits (172), Expect = 6e-11
Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 9/71 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSP------SYSPSSPTYSPSSPYNSGTSPDY--SPSSPQFSP-STGYSP 413
YSPTSP S TSP +SP+SP ++P+SP S TSP Y SP+SP +SP S G+SP
Sbjct: 507 YSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSP 566
Query: 412 SQPGYSPSSTS 380
+ P YSP+S S
Sbjct: 567 TSPSYSPTSPS 577
Score = 68.2 bits (165), Expect = 4e-10
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 35/98 (35%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPDYSPSSPQFSP---- 431
YSPTSPS+SP SP++SP+SP+YSP+SP S TSP Y+P+SP +SP
Sbjct: 571 YSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPGWSPTSPE 630
Query: 430 --------------------STGYSPSQPGYSPSSTSQ 377
S GYSP+ P ++P S Q
Sbjct: 631 TYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 668
Score = 62.8 bits (151), Expect = 2e-08
Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP S ++P+ P YSP
Sbjct: 486 YSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPASPAFAPTSPAYSP 543
Query: 391 SSTSQYTPKTN 359
+S S T+
Sbjct: 544 TSPSYQQSPTS 554
[152][TOP]
>UniRef100_C1GHL1 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1GHL1_PARBD
Length = 1746
Score = 89.0 bits (219), Expect = 2e-16
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 12/87 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG------------ 422
YSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP STG
Sbjct: 1636 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPK 1695
Query: 421 YSPSQPGYSPSSTSQYTPKTNDNKDDP 341
Y+P+ PG+SP+S Y+P + + P
Sbjct: 1696 YTPTSPGWSPTSPETYSPTSPNFSGSP 1722
Score = 83.6 bits (205), Expect = 1e-14
Identities = 40/63 (63%), Positives = 50/63 (79%), Gaps = 3/63 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP FSP S +SP+ P YS
Sbjct: 1613 FAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYS 1672
Query: 394 PSS 386
P+S
Sbjct: 1673 PTS 1675
Score = 71.2 bits (173), Expect = 5e-11
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSP--YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+SP +SP SP ++P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +SP+S
Sbjct: 1602 SSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPAS 1661
Score = 69.7 bits (169), Expect = 1e-10
Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 35/95 (36%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPDYSPSSPQFSP---- 431
YSPTSPS+SP SP++SP+SP+YSP+SP G TSP Y+P+SP +SP
Sbjct: 1650 YSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPE 1709
Query: 430 --------------------STGYSPSQPGYSPSS 386
S GYSP+ P +SP+S
Sbjct: 1710 TYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTS 1744
Score = 68.2 bits (165), Expect = 4e-10
Identities = 40/69 (57%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP--QFSP-STGYSPSQPGYS 395
YSPTSP S TSP + SSP +SP+SP + TSP YSP+SP Q SP S YSP+ PG+S
Sbjct: 1586 YSPTSPGMSITSPRFM-SSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFS 1644
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1645 PTSPS-YSP 1652
Score = 65.9 bits (159), Expect = 2e-09
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 16/78 (20%)
Frame = -3
Query: 565 YSPTSPSYSPT-------------SPSYSPSSPTYSPSSPYNSGTSPDY--SPSSPQFSP 431
YSP+S YSPT SP +SP+SP ++P+SP S TSP Y SP+SP +SP
Sbjct: 1580 YSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSP 1638
Query: 430 -STGYSPSQPGYSPSSTS 380
S G+SP+ P YSP+S S
Sbjct: 1639 TSPGFSPTSPSYSPTSPS 1656
Score = 60.1 bits (144), Expect = 1e-07
Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSP 392
YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP++ ++P+ P YSP
Sbjct: 1565 YSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPASPVFAPTSPAYSP 1622
Query: 391 SS 386
+S
Sbjct: 1623 TS 1624
[153][TOP]
>UniRef100_C0SE75 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SE75_PARBP
Length = 2106
Score = 89.0 bits (219), Expect = 2e-16
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 12/87 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG------------ 422
YSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP STG
Sbjct: 1636 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPK 1695
Query: 421 YSPSQPGYSPSSTSQYTPKTNDNKDDP 341
Y+P+ PG+SP+S Y+P + + P
Sbjct: 1696 YTPTSPGWSPTSPETYSPTSPNFSGSP 1722
Score = 83.6 bits (205), Expect = 1e-14
Identities = 40/63 (63%), Positives = 50/63 (79%), Gaps = 3/63 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP FSP S +SP+ P YS
Sbjct: 1613 FAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYS 1672
Query: 394 PSS 386
P+S
Sbjct: 1673 PTS 1675
Score = 71.2 bits (173), Expect = 5e-11
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSP--YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+SP +SP SP ++P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +SP+S
Sbjct: 1602 SSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPAS 1661
Score = 68.2 bits (165), Expect = 4e-10
Identities = 40/69 (57%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP--QFSP-STGYSPSQPGYS 395
YSPTSP S TSP + SSP +SP+SP + TSP YSP+SP Q SP S YSP+ PG+S
Sbjct: 1586 YSPTSPGMSITSPRFM-SSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFS 1644
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1645 PTSPS-YSP 1652
Score = 68.2 bits (165), Expect = 4e-10
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 35/94 (37%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPDYSPSSPQFSP---- 431
YSPTSPS+SP SP++SP+SP+YSP+SP G TSP Y+P+SP +SP
Sbjct: 1650 YSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPE 1709
Query: 430 --------------------STGYSPSQPGYSPS 389
S GYSP+ P +SP+
Sbjct: 1710 TYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPT 1743
Score = 67.8 bits (164), Expect = 5e-10
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 21/81 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT------------------YSPSSPYNSGTSPD-YSPSSP 443
+SP SP++SPTSPSYSP+SP Y+P+SP S TSP+ YSP+SP
Sbjct: 1657 FSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSP 1716
Query: 442 QF--SPSTGYSPSQPGYSPSS 386
F SP++ P+ PGYSP+S
Sbjct: 1717 NFSGSPTSPGGPTSPGYSPTS 1737
Score = 65.9 bits (159), Expect = 2e-09
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 16/78 (20%)
Frame = -3
Query: 565 YSPTSPSYSPT-------------SPSYSPSSPTYSPSSPYNSGTSPDY--SPSSPQFSP 431
YSP+S YSPT SP +SP+SP ++P+SP S TSP Y SP+SP +SP
Sbjct: 1580 YSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSP 1638
Query: 430 -STGYSPSQPGYSPSSTS 380
S G+SP+ P YSP+S S
Sbjct: 1639 TSPGFSPTSPSYSPTSPS 1656
Score = 60.1 bits (144), Expect = 1e-07
Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSP 392
YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP++ ++P+ P YSP
Sbjct: 1565 YSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPASPVFAPTSPAYSP 1622
Query: 391 SS 386
+S
Sbjct: 1623 TS 1624
[154][TOP]
>UniRef100_C0NEY2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NEY2_AJECG
Length = 1234
Score = 89.0 bits (219), Expect = 2e-16
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 12/87 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG------------ 422
YSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP STG
Sbjct: 1123 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK 1182
Query: 421 YSPSQPGYSPSSTSQYTPKTNDNKDDP 341
Y+P+ PG+SP+S Y+P + + P
Sbjct: 1183 YTPTSPGWSPTSPETYSPTSPNFSGSP 1209
Score = 85.1 bits (209), Expect = 3e-15
Identities = 41/63 (65%), Positives = 51/63 (80%), Gaps = 3/63 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
++PTSP+YSPTSPSY SP+SP+YSP+SP S TSP YSP+SP FSP S +SP+ P YS
Sbjct: 1100 FAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYS 1159
Query: 394 PSS 386
P+S
Sbjct: 1160 PTS 1162
Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/69 (55%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
+SP SP+++PTSP+YSP+SP+Y SP+SP S TSP +SP+SP +SP S +SP+ P +S
Sbjct: 1093 FSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFS 1152
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1153 PTSPS-YSP 1160
Score = 70.9 bits (172), Expect = 6e-11
Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 9/71 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSP------SYSPSSPTYSPSSPYNSGTSPDY--SPSSPQFSP-STGYSP 413
YSPTSP S TSP +SP+SP ++P+SP S TSP Y SP+SP +SP S G+SP
Sbjct: 1073 YSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSP 1132
Query: 412 SQPGYSPSSTS 380
+ P YSP+S S
Sbjct: 1133 TSPSYSPTSPS 1143
Score = 68.2 bits (165), Expect = 4e-10
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 35/98 (35%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPDYSPSSPQFSP---- 431
YSPTSPS+SP SP++SP+SP+YSP+SP S TSP Y+P+SP +SP
Sbjct: 1137 YSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPGWSPTSPE 1196
Query: 430 --------------------STGYSPSQPGYSPSSTSQ 377
S GYSP+ P ++P S Q
Sbjct: 1197 TYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 1234
Score = 62.8 bits (151), Expect = 2e-08
Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP S ++P+ P YSP
Sbjct: 1052 YSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPASPAFAPTSPAYSP 1109
Query: 391 SSTSQYTPKTN 359
+S S T+
Sbjct: 1110 TSPSYQQSPTS 1120
[155][TOP]
>UniRef100_A6QYA7 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6QYA7_AJECN
Length = 1747
Score = 89.0 bits (219), Expect = 2e-16
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 12/87 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG------------ 422
YSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP STG
Sbjct: 1636 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK 1695
Query: 421 YSPSQPGYSPSSTSQYTPKTNDNKDDP 341
Y+P+ PG+SP+S Y+P + + P
Sbjct: 1696 YTPTSPGWSPTSPETYSPTSPNFSGSP 1722
Score = 85.1 bits (209), Expect = 3e-15
Identities = 41/63 (65%), Positives = 51/63 (80%), Gaps = 3/63 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
++PTSP+YSPTSPSY SP+SP+YSP+SP S TSP YSP+SP FSP S +SP+ P YS
Sbjct: 1613 FAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYS 1672
Query: 394 PSS 386
P+S
Sbjct: 1673 PTS 1675
Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/69 (55%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
+SP SP+++PTSP+YSP+SP+Y SP+SP S TSP +SP+SP +SP S +SP+ P +S
Sbjct: 1606 FSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFS 1665
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1666 PTSPS-YSP 1673
Score = 70.9 bits (172), Expect = 6e-11
Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 9/71 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSP------SYSPSSPTYSPSSPYNSGTSPDY--SPSSPQFSP-STGYSP 413
YSPTSP S TSP +SP+SP ++P+SP S TSP Y SP+SP +SP S G+SP
Sbjct: 1586 YSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSP 1645
Query: 412 SQPGYSPSSTS 380
+ P YSP+S S
Sbjct: 1646 TSPSYSPTSPS 1656
Score = 68.2 bits (165), Expect = 4e-10
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 35/98 (35%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPDYSPSSPQFSP---- 431
YSPTSPS+SP SP++SP+SP+YSP+SP S TSP Y+P+SP +SP
Sbjct: 1650 YSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPGWSPTSPE 1709
Query: 430 --------------------STGYSPSQPGYSPSSTSQ 377
S GYSP+ P ++P S Q
Sbjct: 1710 TYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 1747
Score = 62.8 bits (151), Expect = 2e-08
Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP S ++P+ P YSP
Sbjct: 1565 YSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPASPAFAPTSPAYSP 1622
Query: 391 SSTSQYTPKTN 359
+S S T+
Sbjct: 1623 TSPSYQQSPTS 1633
[156][TOP]
>UniRef100_C5GKA7 DNA-directed RNA polymerase n=2 Tax=Ajellomyces dermatitidis
RepID=C5GKA7_AJEDR
Length = 1746
Score = 88.6 bits (218), Expect = 3e-16
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 12/87 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG------------ 422
YSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP STG
Sbjct: 1635 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGISTGRHLSPTSPTSPK 1694
Query: 421 YSPSQPGYSPSSTSQYTPKTNDNKDDP 341
Y+P+ PG+SP+S Y+P + + P
Sbjct: 1695 YTPTSPGWSPTSPETYSPTSPNFSGSP 1721
Score = 83.6 bits (205), Expect = 1e-14
Identities = 40/63 (63%), Positives = 50/63 (79%), Gaps = 3/63 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP FSP S +SP+ P YS
Sbjct: 1612 FAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYS 1671
Query: 394 PSS 386
P+S
Sbjct: 1672 PTS 1674
Score = 72.4 bits (176), Expect = 2e-11
Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 3/60 (5%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSP--YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+SP +SP SP+++P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +SP+S
Sbjct: 1601 SSPGFSPASPAFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPAS 1660
Score = 69.3 bits (168), Expect = 2e-10
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 35/98 (35%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPDYSPSSPQFSP---- 431
YSPTSPS+SP SP++SP+SP+YSP+SP S TSP Y+P+SP +SP
Sbjct: 1649 YSPTSPSFSPASPAFSPTSPSYSPTSPALGISTGRHLSPTSPTSPKYTPTSPGWSPTSPE 1708
Query: 430 --------------------STGYSPSQPGYSPSSTSQ 377
S GYSP+ P ++P+S Q
Sbjct: 1709 TYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1746
Score = 67.8 bits (164), Expect = 5e-10
Identities = 40/69 (57%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP--QFSP-STGYSPSQPGYS 395
YSPTSP S TSP + SSP +SP+SP + TSP YSP+SP Q SP S YSP+ PG+S
Sbjct: 1585 YSPTSPGMSITSPRFM-SSPGFSPASPAFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFS 1643
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1644 PTSPS-YSP 1651
Score = 65.9 bits (159), Expect = 2e-09
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 16/78 (20%)
Frame = -3
Query: 565 YSPTSPSYSPT-------------SPSYSPSSPTYSPSSPYNSGTSPDY--SPSSPQFSP 431
YSP+S YSPT SP +SP+SP ++P+SP S TSP Y SP+SP +SP
Sbjct: 1579 YSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPGYQQSPTSPSYSP 1637
Query: 430 -STGYSPSQPGYSPSSTS 380
S G+SP+ P YSP+S S
Sbjct: 1638 TSPGFSPTSPSYSPTSPS 1655
Score = 62.8 bits (151), Expect = 2e-08
Identities = 38/62 (61%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSPTSP + SPTSP YSPSS YSP+SP S TSP + SSP FSP S ++P+ P YSP
Sbjct: 1564 YSPTSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPASPAFAPTSPAYSP 1621
Query: 391 SS 386
+S
Sbjct: 1622 TS 1623
[157][TOP]
>UniRef100_C6F1F3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F3_9APIC
Length = 225
Score = 88.2 bits (217), Expect = 4e-16
Identities = 42/69 (60%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP Y P+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 63 YSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPT 122
Query: 388 STSQYTPKT 362
S P +
Sbjct: 123 SPVPNNPSS 131
Score = 86.7 bits (213), Expect = 1e-15
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS TSP YSPTSP YSP+SP Y P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 115
Query: 388 STSQYTP 368
S QY+P
Sbjct: 116 S-PQYSP 121
Score = 83.2 bits (204), Expect = 1e-14
Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY--SPSQPGYSP 392
Y PTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP++ +PS P YSP
Sbjct: 77 YLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSP 136
Score = 77.0 bits (188), Expect = 9e-13
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+S SP YS TSP YSP+SP YSP+SP TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 108
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 109 S-PKYSP 114
Score = 62.4 bits (150), Expect = 2e-08
Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQFSP-STGYSPSQPGY 398
YSPTSP YSPTSP YSP+SP P++P +SP YSP +SP+FSP S YS S P Y
Sbjct: 105 YSPTSPKYSPTSPQYSPTSPV--PNNP----SSPHYSPYAIASPKFSPTSPAYSISSPVY 158
Query: 397 SPSSTSQ 377
S ++
Sbjct: 159 DQSGNAR 165
[158][TOP]
>UniRef100_C6F1F0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F0_PLAVI
Length = 218
Score = 88.2 bits (217), Expect = 4e-16
Identities = 43/69 (62%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSPS
Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 115
Query: 388 STSQYTPKT 362
S P +
Sbjct: 116 SPVPNNPSS 124
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSPS P +
Sbjct: 63 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNP 122
Query: 388 STSQYTP 368
S+ Y+P
Sbjct: 123 SSPHYSP 129
Score = 81.3 bits (199), Expect = 5e-14
Identities = 41/69 (59%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+S SP YS TSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 108
Query: 388 STSQYTPKT 362
S QY+P +
Sbjct: 109 S-PQYSPSS 116
Score = 63.5 bits (153), Expect = 1e-08
Identities = 37/67 (55%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQFSP-STGYSPSQPGY 398
YSPTSP YSPTSP YSPSSP P++P +SP YSP +SP+FSP S YS S P Y
Sbjct: 98 YSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPKFSPTSPAYSISSPVY 151
Query: 397 SPSSTSQ 377
S ++
Sbjct: 152 DQSGNAR 158
[159][TOP]
>UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L732_DROMO
Length = 1889
Score = 87.8 bits (216), Expect = 5e-16
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSP SPSYSPSSP+YSP+SP S TSP YSP+SP ++P T YSP+ P YS S
Sbjct: 1680 YSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739
Query: 388 STSQYTP 368
Y+P
Sbjct: 1740 --PHYSP 1744
Score = 85.9 bits (211), Expect = 2e-15
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPS- 389
YSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S YSP+ P YS +
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTG 1753
Query: 388 -----STSQYTPKTNDNKDDPGT 335
++ Y+P + PG+
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 84.0 bits (206), Expect = 7e-15
Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+S +YSP SPSYSP SP+YSPSSP S TSP YSP+SP +SP S Y+P P YSP+
Sbjct: 1673 YSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPT 1732
Query: 388 S 386
S
Sbjct: 1733 S 1733
Score = 82.8 bits (203), Expect = 2e-14
Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 6/75 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSP+Y+ +SP +YSPSSP YSP+SP + TSP Y+ ++P F+P STGYSPS
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASTSPRYASTTPNFNPQSTGYSPSSS 1638
Query: 403 GYSPSSTSQYTPKTN 359
GYSP+S Y+P +N
Sbjct: 1639 GYSPTS-PVYSPTSN 1652
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1816 TGSTYSATS-PRYSP 1829
Score = 75.9 bits (185), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1802 PSSPQHSPS--NQYSP 1815
Score = 75.9 bits (185), Expect = 2e-12
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 445 PQFSPST-GYSPSQPGYSPSSTSQYTP 368
P ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 75.5 bits (184), Expect = 3e-12
Identities = 36/76 (47%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y+ +SP + T+P+++P S +SP S+GYSP+ P YSP+S Q
Sbjct: 1595 SPNYSPSSPNYSPTSPLYASTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQ 1654
Query: 376 YTPK---TNDNKDDPG 338
+P + N PG
Sbjct: 1655 SSPSFAGSGSNMYSPG 1670
Score = 73.6 bits (179), Expect = 1e-11
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 23/89 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--------------------TSPDYSPSS 446
YSPTSPSYSPTSP+Y+P +P+YSP+SP S TSP YSP S
Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767
Query: 445 PQFSPSTG---YSPSQPGYSPSSTSQYTP 368
P + S G Y+P P YSP+S +Y+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPAS-PKYSP 1795
Score = 73.2 bits (178), Expect = 1e-11
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP SP S +SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 1667 YSPGN-AYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP- 1724
Query: 388 STSQYTPKTNDNKDDP 341
T Y+P + + P
Sbjct: 1725 VTPSYSPTSPNYSASP 1740
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1839 TKYSPTSPT-YTP 1850
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP+ P YSP
Sbjct: 1820 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Query: 391 SS 386
SS
Sbjct: 1880 SS 1881
Score = 70.1 bits (170), Expect = 1e-10
Identities = 45/94 (47%), Positives = 51/94 (54%), Gaps = 26/94 (27%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------------YSPSSPYNSGTSPDYSPSSP 443
YSP+S YSPTSP YSP SSP+ YSPSS S SP YSP SP
Sbjct: 1633 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPMSP 1692
Query: 442 QFSPST-GYSPSQPGYSPSSTS------QYTPKT 362
+SPS+ YSP+ P YSP+S S YTP T
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1831
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1832 SIYSPSST-KYSP 1843
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F S
Sbjct: 1841 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 63.5 bits (153), Expect = 1e-08
Identities = 28/66 (42%), Positives = 45/66 (68%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP Y+ TSP Y+ ++P ++P S S +S YSP+SP +SP++ + S P ++ S
Sbjct: 1605 YSPTSPLYASTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQ-SSPSFAGSG 1663
Query: 385 TSQYTP 368
++ Y+P
Sbjct: 1664 SNMYSP 1669
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 406 PGYSPSS 386
P YSP+S
Sbjct: 1603 PNYSPTS 1609
[160][TOP]
>UniRef100_C1H3Q4 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1H3Q4_PARBA
Length = 1748
Score = 87.8 bits (216), Expect = 5e-16
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 12/87 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG------------ 422
YSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP STG
Sbjct: 1641 YSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPK 1700
Query: 421 YSPSQPGYSPSSTSQYTPKTNDNKDDP 341
Y+P+ PG+SP+S Y+P + + P
Sbjct: 1701 YTPTSPGWSPTSPETYSPTSPNFSGSP 1727
Score = 84.0 bits (206), Expect = 7e-15
Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 3/63 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP+YSP+SP FSP S +SP+ P YS
Sbjct: 1618 FAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYS 1677
Query: 394 PSS 386
P+S
Sbjct: 1678 PTS 1680
Score = 71.2 bits (173), Expect = 5e-11
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSP--YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
+SP +SP SP ++P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +SP+S
Sbjct: 1607 SSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPAS 1666
Score = 68.2 bits (165), Expect = 4e-10
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 35/94 (37%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPDYSPSSPQFSP---- 431
YSPTSPS+SP SP++SP+SP+YSP+SP G TSP Y+P+SP +SP
Sbjct: 1655 YSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPE 1714
Query: 430 --------------------STGYSPSQPGYSPS 389
S GYSP+ P +SP+
Sbjct: 1715 TYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPT 1748
Score = 67.8 bits (164), Expect = 5e-10
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 21/81 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT------------------YSPSSPYNSGTSPD-YSPSSP 443
+SP SP++SPTSPSYSP+SP Y+P+SP S TSP+ YSP+SP
Sbjct: 1662 FSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSP 1721
Query: 442 QF--SPSTGYSPSQPGYSPSS 386
F SP++ P+ PGYSP+S
Sbjct: 1722 NFSGSPTSPGGPTSPGYSPTS 1742
Score = 65.9 bits (159), Expect = 2e-09
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 16/78 (20%)
Frame = -3
Query: 565 YSPTSPSYSPT-------------SPSYSPSSPTYSPSSPYNSGTSPDY--SPSSPQFSP 431
YSP+S YSPT SP +SP+SP ++P+SP S TSP Y SP+SP +SP
Sbjct: 1585 YSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSP 1643
Query: 430 -STGYSPSQPGYSPSSTS 380
S G+SP+ P YSP+S S
Sbjct: 1644 TSPGFSPTSPNYSPTSPS 1661
Score = 60.1 bits (144), Expect = 1e-07
Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSP 392
YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP++ ++P+ P YSP
Sbjct: 1570 YSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPASPVFAPTSPAYSP 1627
Query: 391 SS 386
+S
Sbjct: 1628 TS 1629
[161][TOP]
>UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4P7Q0_USTMA
Length = 1774
Score = 87.4 bits (215), Expect = 7e-16
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 7/67 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT---YSPSSP---YNSGTSPDYSPSSPQFSP-STGYSPSQ 407
YSPTSPSYSP SP+YSPSSP YSPSSP Y + TSP YSP+SP+FSP S YSP+
Sbjct: 1610 YSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPAS 1669
Query: 406 PGYSPSS 386
P Y+P+S
Sbjct: 1670 PAYTPTS 1676
Score = 79.0 bits (193), Expect = 2e-13
Identities = 42/83 (50%), Positives = 53/83 (63%), Gaps = 17/83 (20%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN----------------SGTSPDYSPSSPQFS 434
YSP SP +SPTSP+YSP+SP Y+P+SP S TSP YSP+SPQ+S
Sbjct: 1651 YSPASPKFSPTSPNYSPASPAYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTSPQYS 1710
Query: 433 P-STGYSPSQPGYSPSSTSQYTP 368
P S +SP+ P YSP+S QY+P
Sbjct: 1711 PASPAFSPTSPQYSPAS-PQYSP 1732
Score = 76.3 bits (186), Expect = 2e-12
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 6/66 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQP 404
+SPTSP+YSPTSP YSP+SP +SP+SP S SP YSP+SPQ+SP++ G S P
Sbjct: 1695 FSPTSPAYSPTSPQYSPASPAFSPTSPQYSPASPQYSPTSPQYSPTSPAMGMGGASAGGP 1754
Query: 403 GYSPSS 386
G + +S
Sbjct: 1755 GAAAAS 1760
Score = 73.9 bits (180), Expect = 8e-12
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS---PSTGYSPSQPGYSPSS 386
TSP YSP SP +SP+SP YSP+SP + TSP YSP+SP + G+SP+ P YSP+S
Sbjct: 1647 TSPQYSPASPKFSPTSPNYSPASPAYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTS 1706
Query: 385 TSQYTP 368
QY+P
Sbjct: 1707 -PQYSP 1711
Score = 67.8 bits (164), Expect = 5e-10
Identities = 40/84 (47%), Positives = 46/84 (54%), Gaps = 24/84 (28%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPS------------------SPTYSPSSP--YNSGTSPDYSPSS 446
+SP SP Y PTSP Y+ S SP YSP+SP + TSP YSP+S
Sbjct: 1555 FSPVSPGYVPTSPGYATSPAGALGGMSPWTGNMGATSPAYSPTSPRIFGGATSPSYSPTS 1614
Query: 445 PQFSP-STGYSPSQP---GYSPSS 386
P +SP S YSPS P GYSPSS
Sbjct: 1615 PSYSPASPNYSPSSPAGAGYSPSS 1638
Score = 64.7 bits (156), Expect = 5e-09
Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = -3
Query: 556 TSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPG--YSPS 389
TSP+YSPTSP +SP+YSP+SP S SP+YSPSSP GYSPS P Y +
Sbjct: 1590 TSPAYSPTSPRIFGGATSPSYSPTSPSYSPASPNYSPSSP---AGAGYSPSSPAGRYGAA 1646
Query: 388 STSQYTP 368
++ QY+P
Sbjct: 1647 TSPQYSP 1653
[162][TOP]
>UniRef100_Q1E2G9 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1E2G9_COCIM
Length = 1750
Score = 87.4 bits (215), Expect = 7e-16
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 12/87 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG------------ 422
YSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP +TG
Sbjct: 1639 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPK 1698
Query: 421 YSPSQPGYSPSSTSQYTPKTNDNKDDP 341
Y+P+ PG+SP+S Y+P + + P
Sbjct: 1699 YTPTSPGWSPTSPEAYSPTSPNFAGSP 1725
Score = 82.8 bits (203), Expect = 2e-14
Identities = 40/65 (61%), Positives = 50/65 (76%), Gaps = 5/65 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 401
++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP FSP S +SP+ P
Sbjct: 1614 FAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPS 1673
Query: 400 YSPSS 386
YSP+S
Sbjct: 1674 YSPTS 1678
Score = 72.8 bits (177), Expect = 2e-11
Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 5/62 (8%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSP----YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
TSP +SP SP+++P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +SP
Sbjct: 1603 TSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSP 1662
Query: 391 SS 386
+S
Sbjct: 1663 AS 1664
Score = 69.7 bits (169), Expect = 1e-10
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 35/98 (35%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPDYSPSSPQFSP---- 431
YSPTSPS+SP SP++SP+SP+YSP+SP G TSP Y+P+SP +SP
Sbjct: 1653 YSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWSPTSPE 1712
Query: 430 --------------------STGYSPSQPGYSPSSTSQ 377
S GYSP+ P ++P+S Q
Sbjct: 1713 AYSPTSPNFAGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1750
Score = 67.0 bits (162), Expect = 9e-10
Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 18/80 (22%)
Frame = -3
Query: 565 YSPTSPSYSP-------------TSPSYSPSSPTYSPSSPYNSGTSPDY----SPSSPQF 437
YSP+S YSP TSP +SP+SPT++P+SP S TSP Y SP+SP +
Sbjct: 1581 YSPSS-GYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSY 1639
Query: 436 SP-STGYSPSQPGYSPSSTS 380
SP S G+SP+ P YSP+S S
Sbjct: 1640 SPTSPGFSPTSPSYSPTSPS 1659
Score = 62.8 bits (151), Expect = 2e-08
Identities = 38/62 (61%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSPTSP + SPTSP YSPSS YSP+SP S TSP Y +SP FSP S ++P+ P YSP
Sbjct: 1566 YSPTSPFNTSPTSPGYSPSSG-YSPTSPGMSITSPRYM-TSPGFSPASPTFAPTSPAYSP 1623
Query: 391 SS 386
+S
Sbjct: 1624 TS 1625
[163][TOP]
>UniRef100_C5PAJ4 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta
SOWgp RepID=C5PAJ4_COCP7
Length = 1746
Score = 87.4 bits (215), Expect = 7e-16
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 12/87 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG------------ 422
YSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP +TG
Sbjct: 1639 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPK 1698
Query: 421 YSPSQPGYSPSSTSQYTPKTNDNKDDP 341
Y+P+ PG+SP+S Y+P + + P
Sbjct: 1699 YTPTSPGWSPTSPEAYSPTSPNFAGSP 1725
Score = 82.8 bits (203), Expect = 2e-14
Identities = 40/65 (61%), Positives = 50/65 (76%), Gaps = 5/65 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 401
++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP FSP S +SP+ P
Sbjct: 1614 FAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPS 1673
Query: 400 YSPSS 386
YSP+S
Sbjct: 1674 YSPTS 1678
Score = 72.8 bits (177), Expect = 2e-11
Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 5/62 (8%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSP----YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
TSP +SP SP+++P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +SP
Sbjct: 1603 TSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSP 1662
Query: 391 SS 386
+S
Sbjct: 1663 AS 1664
Score = 67.8 bits (164), Expect = 5e-10
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 21/81 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT------------------YSPSSPYNSGTSPD-YSPSSP 443
+SP SP++SPTSPSYSP+SP Y+P+SP S TSP+ YSP+SP
Sbjct: 1660 FSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSP 1719
Query: 442 QF--SPSTGYSPSQPGYSPSS 386
F SP++ P+ PGYSP+S
Sbjct: 1720 NFAGSPTSPGGPTSPGYSPTS 1740
Score = 67.0 bits (162), Expect = 9e-10
Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 18/80 (22%)
Frame = -3
Query: 565 YSPTSPSYSP-------------TSPSYSPSSPTYSPSSPYNSGTSPDY----SPSSPQF 437
YSP+S YSP TSP +SP+SPT++P+SP S TSP Y SP+SP +
Sbjct: 1581 YSPSS-GYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSY 1639
Query: 436 SP-STGYSPSQPGYSPSSTS 380
SP S G+SP+ P YSP+S S
Sbjct: 1640 SPTSPGFSPTSPSYSPTSPS 1659
Score = 67.0 bits (162), Expect = 9e-10
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 35/94 (37%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPDYSPSSPQFSP---- 431
YSPTSPS+SP SP++SP+SP+YSP+SP G TSP Y+P+SP +SP
Sbjct: 1653 YSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWSPTSPE 1712
Query: 430 --------------------STGYSPSQPGYSPS 389
S GYSP+ P ++P+
Sbjct: 1713 AYSPTSPNFAGSPTSPGGPTSPGYSPTSPTFNPT 1746
Score = 62.8 bits (151), Expect = 2e-08
Identities = 38/62 (61%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSPTSP + SPTSP YSPSS YSP+SP S TSP Y +SP FSP S ++P+ P YSP
Sbjct: 1566 YSPTSPFNTSPTSPGYSPSSG-YSPTSPGMSITSPRYM-TSPGFSPASPTFAPTSPAYSP 1623
Query: 391 SS 386
+S
Sbjct: 1624 TS 1625
[164][TOP]
>UniRef100_O77165 DNA-directed RNA polymerase (Fragment) n=1 Tax=Breviata anathema
RepID=O77165_9EUKA
Length = 1690
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1506 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1565
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1566 SPA-YSP 1571
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1527 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1586
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1587 SPA-YSP 1592
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1548 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1607
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1608 SPA-YSP 1613
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1569 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1628
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1629 SPA-YSP 1634
Score = 85.5 bits (210), Expect = 3e-15
Identities = 39/61 (63%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+
Sbjct: 1590 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1649
Query: 388 S 386
S
Sbjct: 1650 S 1650
Score = 85.1 bits (209), Expect = 3e-15
Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP + P S YSP+ P YSP+
Sbjct: 1611 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPA 1670
Query: 388 STSQYTP 368
S + Y+P
Sbjct: 1671 SPA-YSP 1676
Score = 84.3 bits (207), Expect = 6e-15
Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SP+YSP SP+YSP+SP YSP+SP S SP Y P+SP +SP S YSP+ P YSP+
Sbjct: 1618 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPA 1677
Query: 388 STSQYTP 368
S + Y P
Sbjct: 1678 SPA-YDP 1683
Score = 80.9 bits (198), Expect = 6e-14
Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP SP+YSP SP+YSP+SP YSP+SP SP YSP+SP +SP S YSP+ P Y P+
Sbjct: 1625 YSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPA 1684
Score = 79.3 bits (194), Expect = 2e-13
Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SP + YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1500 SPAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPAS 1559
Query: 385 TSQYTP 368
+ Y+P
Sbjct: 1560 PA-YSP 1564
Score = 75.5 bits (184), Expect = 3e-12
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSP-------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1513 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1572
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1573 SPAYSPASPA-YSP 1585
Score = 75.5 bits (184), Expect = 3e-12
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSP-------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1534 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1593
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1594 SPAYSPASPA-YSP 1606
Score = 75.5 bits (184), Expect = 3e-12
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSP-------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1555 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1614
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1615 SPAYSPASPA-YSP 1627
Score = 75.5 bits (184), Expect = 3e-12
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSP-------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP+
Sbjct: 1576 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1635
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1636 SPAYSPASPA-YSP 1648
Score = 74.3 bits (181), Expect = 6e-12
Identities = 33/55 (60%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSP SP+YSP SP+YSP+SP Y P+SP S SP YSP+SP +SP S Y P++P
Sbjct: 1632 YSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPAEP 1686
Score = 73.9 bits (180), Expect = 8e-12
Identities = 40/74 (54%), Positives = 50/74 (67%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSYSP-------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S Y P+
Sbjct: 1597 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPA 1656
Query: 409 QPGYSPSSTSQYTP 368
P YSP+S + Y+P
Sbjct: 1657 SPAYSPASPA-YSP 1669
Score = 68.9 bits (167), Expect = 2e-10
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 419
YSP SP+YSP SP+Y P+SP YSP+SP S SP YSP+SP + P+ Y
Sbjct: 1639 YSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPAEPY 1687
Score = 61.2 bits (147), Expect = 5e-08
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Frame = -3
Query: 538 PTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYT 371
P SP+ SP+SP YSP+SP S SP YSP+SP +SP S YSP+ P YSP+S + Y+
Sbjct: 1498 PGSPAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPA-YS 1556
Query: 370 P 368
P
Sbjct: 1557 P 1557
[165][TOP]
>UniRef100_C6F1F1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F1_PLAVI
Length = 211
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/60 (68%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY--SPSQPGYSP 392
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SPS+ +PS P YSP
Sbjct: 63 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 122
Score = 83.6 bits (205), Expect = 1e-14
Identities = 41/67 (61%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSPS P +
Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNP 115
Query: 388 STSQYTP 368
S+ Y+P
Sbjct: 116 SSPHYSP 122
Score = 80.1 bits (196), Expect = 1e-13
Identities = 40/69 (57%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+S SP YS TSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSPS
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 108
Query: 388 STSQYTPKT 362
S P +
Sbjct: 109 SPVPNNPSS 117
Score = 65.9 bits (159), Expect = 2e-09
Identities = 44/110 (40%), Positives = 55/110 (50%), Gaps = 42/110 (38%)
Frame = -3
Query: 565 YSPTSPS---------------------YSPTSPS--------------------YSPSS 509
YSPTSP+ YSPTSP+ YS +S
Sbjct: 1 YSPTSPTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTS 60
Query: 508 PTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 362
P YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+S QY+P +
Sbjct: 61 PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSPSS 109
Score = 63.5 bits (153), Expect = 1e-08
Identities = 37/67 (55%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQFSP-STGYSPSQPGY 398
YSPTSP YSPTSP YSPSSP P++P +SP YSP +SP+FSP S YS S P Y
Sbjct: 91 YSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPKFSPTSPAYSISSPVY 144
Query: 397 SPSSTSQ 377
S ++
Sbjct: 145 DQSGNAR 151
[166][TOP]
>UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JXA6_DROGR
Length = 1889
Score = 86.7 bits (213), Expect = 1e-15
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPS- 389
YSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S YSP+ P YS +
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSASPHYSPASPAYSQTG 1753
Query: 388 -----STSQYTPKTNDNKDDPGT 335
++ Y+P + PG+
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 85.1 bits (209), Expect = 3e-15
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YSP SPSYSP SPSYSPSSP+YSP+SP S TSP YSP+SP+++ T YSP+ P YS S
Sbjct: 1680 YSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSAS 1739
Query: 388 STSQYTP 368
Y+P
Sbjct: 1740 --PHYSP 1744
Score = 79.7 bits (195), Expect = 1e-13
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 6/75 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPSTGYSPSQP 404
YSPTSP+Y+ +SP +YSPSSP YSP+SP + TSP Y+ ++P F + STGYSPS
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSS 1638
Query: 403 GYSPSSTSQYTPKTN 359
GYSP+S Y+P +N
Sbjct: 1639 GYSPTS-PVYSPTSN 1652
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1816 TGSTYSATS-PRYSP 1829
Score = 75.9 bits (185), Expect = 2e-12
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---------SPDYSPSSPQFSPSTG-YS 416
YSP SP+YS T YSP+SPTYSP SP G+ SP YSP+SP++SP++ YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 415 PSQPGYSPSSTSQYTP 368
PS P +SPS +QY+P
Sbjct: 1802 PSSPQHSPS--NQYSP 1815
Score = 75.9 bits (185), Expect = 2e-12
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 445 PQFSPST-GYSPSQPGYSPSSTSQYTP 368
P ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1839 TKYSPTSPT-YTP 1850
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP+ P YSP
Sbjct: 1820 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Query: 391 SS 386
SS
Sbjct: 1880 SS 1881
Score = 70.1 bits (170), Expect = 1e-10
Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y+ +SP + +P+++ S +SP S+GYSP+ P YSP+S Q
Sbjct: 1595 SPNYSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSSGYSPTSPVYSPTSNFQ 1654
Query: 376 YTPK---TNDNKDDPG 338
+P + N PG
Sbjct: 1655 SSPSFAGSGSNLYSPG 1670
Score = 70.1 bits (170), Expect = 1e-10
Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +YSP+SP+YSP SP S +SP YSP+SP +SP S YSP+ P Y+ +
Sbjct: 1667 YSPGN-AYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYT-A 1724
Query: 388 STSQYTPKTNDNKDDP 341
T Y+P + + P
Sbjct: 1725 VTPSYSPTSPNYSASP 1740
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1831
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1832 SIYSPSST-KYSP 1843
Score = 66.6 bits (161), Expect = 1e-09
Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 14/80 (17%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-----SSPT--------YSPSSPYNSGTSPDYSPSSPQFSP-S 428
YSP+S YSPTSP YSP SSP+ YSP + Y S +S +YSP+SP +SP S
Sbjct: 1633 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNLYSPGNAY-SPSSSNYSPNSPSYSPMS 1691
Query: 427 TGYSPSQPGYSPSSTSQYTP 368
YSPS P YSP+S Y+P
Sbjct: 1692 PSYSPSSPSYSPTSPC-YSP 1710
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F S
Sbjct: 1841 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 406 PGYSPSS 386
P YSP+S
Sbjct: 1603 PNYSPTS 1609
[167][TOP]
>UniRef100_A5K7P4 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K7P4_PLAVI
Length = 2379
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/60 (68%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY--SPSQPGYSP 392
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SPS+ +PS P YSP
Sbjct: 2231 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 2290
Score = 83.6 bits (205), Expect = 1e-14
Identities = 41/67 (61%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSPS P +
Sbjct: 2224 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNP 2283
Query: 388 STSQYTP 368
S+ Y+P
Sbjct: 2284 SSPHYSP 2290
Score = 80.1 bits (196), Expect = 1e-13
Identities = 40/69 (57%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+S SP YS TSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSPS
Sbjct: 2217 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 2276
Query: 388 STSQYTPKT 362
S P +
Sbjct: 2277 SPVPNNPSS 2285
Score = 65.9 bits (159), Expect = 2e-09
Identities = 44/110 (40%), Positives = 55/110 (50%), Gaps = 42/110 (38%)
Frame = -3
Query: 565 YSPTSPS---------------------YSPTSPS--------------------YSPSS 509
YSPTSP+ YSPTSP+ YS +S
Sbjct: 2169 YSPTSPTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTS 2228
Query: 508 PTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 362
P YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+S QY+P +
Sbjct: 2229 PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSPSS 2277
Score = 63.5 bits (153), Expect = 1e-08
Identities = 37/67 (55%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQFSP-STGYSPSQPGY 398
YSPTSP YSPTSP YSPSSP P++P +SP YSP +SP+FSP S YS S P Y
Sbjct: 2259 YSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPKFSPTSPAYSISSPVY 2312
Query: 397 SPSSTSQ 377
S ++
Sbjct: 2313 DQSGNAR 2319
[168][TOP]
>UniRef100_C6F0A4 RNA polymerase II (Fragment) n=2 Tax=Plasmodium (Laverania)
RepID=C6F0A4_PLAFA
Length = 202
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/61 (67%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 40 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 99
Query: 388 S 386
S
Sbjct: 100 S 100
Score = 84.3 bits (207), Expect = 6e-15
Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P
Sbjct: 47 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNI 106
Query: 388 STSQYTP 368
++ Y+P
Sbjct: 107 ASPNYSP 113
Score = 81.3 bits (199), Expect = 5e-14
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP++ + + P YSP
Sbjct: 54 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSP 113
Query: 391 SS 386
S
Sbjct: 114 YS 115
Score = 79.7 bits (195), Expect = 1e-13
Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+ SP YS TSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 33 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 92
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 93 S-PKYSP 98
Score = 60.8 bits (146), Expect = 7e-08
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 19/78 (24%)
Frame = -3
Query: 544 YSPTSPSYSPSSPTYSPSSPYN------------------SGTSPDYSPSSPQFSP-STG 422
YSPTSP+Y+ ++ YSP+SP N S TSP YSP+SP++SP S
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S +Y+P
Sbjct: 61 YSPTSPKYSPTS-PKYSP 77
Score = 60.8 bits (146), Expect = 7e-08
Identities = 37/84 (44%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSPDYSPSSPQFSPS--- 428
YSPTSP YSPTSP YSP+SP YS +SP S TSP YS SSP + S
Sbjct: 82 YSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKSGVV 141
Query: 427 TGYSPSQPGYSPSSTSQYTPKTND 356
+ P P Y S Q D
Sbjct: 142 NAHQPMSPAYILQSPVQIKQNVQD 165
[169][TOP]
>UniRef100_C4JY44 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JY44_UNCRE
Length = 1747
Score = 86.3 bits (212), Expect = 1e-15
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 12/87 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG------------ 422
YSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP TG
Sbjct: 1591 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGVTGRHLSPTSPTSPK 1650
Query: 421 YSPSQPGYSPSSTSQYTPKTNDNKDDP 341
Y+P+ PG+SP+S Y+P + + P
Sbjct: 1651 YTPTSPGWSPTSPDAYSPTSPNFAGSP 1677
Score = 82.8 bits (203), Expect = 2e-14
Identities = 40/65 (61%), Positives = 50/65 (76%), Gaps = 5/65 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 401
++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP FSP S +SP+ P
Sbjct: 1566 FAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPS 1625
Query: 400 YSPSS 386
YSP+S
Sbjct: 1626 YSPTS 1630
Score = 73.9 bits (180), Expect = 8e-12
Identities = 36/62 (58%), Positives = 45/62 (72%), Gaps = 5/62 (8%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSP----YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
TSP +SP SPS++P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +SP
Sbjct: 1555 TSPGFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSP 1614
Query: 391 SS 386
+S
Sbjct: 1615 AS 1616
Score = 70.5 bits (171), Expect = 8e-11
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 29/95 (30%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPDYSPSSPQFSPST-- 425
YSPTSPS+SP SP++SP+SP+YSP+SP G TSP Y+P+SP +SP++
Sbjct: 1605 YSPTSPSFSPASPAFSPTSPSYSPTSPALGGVTGRHLSPTSPTSPKYTPTSPGWSPTSPD 1664
Query: 424 GYSPSQ----------------PGYSPSSTSQYTP 368
YSP+ PGYSP+S + Y P
Sbjct: 1665 AYSPTSPNFAGSPTSPGWSLLPPGYSPTSPT-YNP 1698
Score = 65.5 bits (158), Expect = 3e-09
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 18/80 (22%)
Frame = -3
Query: 565 YSPTSPSYSP-------------TSPSYSPSSPTYSPSSPYNSGTSPDY----SPSSPQF 437
YSP+S YSP TSP +SP+SP+++P+SP S TSP Y SP+SP +
Sbjct: 1533 YSPSS-GYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSY 1591
Query: 436 SP-STGYSPSQPGYSPSSTS 380
SP S G+SP+ P YSP+S S
Sbjct: 1592 SPTSPGFSPTSPSYSPTSPS 1611
Score = 60.5 bits (145), Expect = 9e-08
Identities = 36/62 (58%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSPTSP + SPTSP YSPSS YSP+SP TSP + +SP FSP S ++P+ P YSP
Sbjct: 1518 YSPTSPFNTSPTSPGYSPSSG-YSPTSPGMGITSPRFM-TSPGFSPASPSFAPTSPAYSP 1575
Query: 391 SS 386
+S
Sbjct: 1576 TS 1577
Score = 54.7 bits (130), Expect = 5e-06
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP-TYSPSSPYNSGTS---------PDYSPSSPQFSPS 428
SPTSP Y+PTSP +SP+SP YSP+SP +G+ P YSP+SP ++P+
Sbjct: 1645 SPTSPKYTPTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLLPPGYSPTSPTYNPN 1699
[170][TOP]
>UniRef100_P14248 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Plasmodium
falciparum CDC/Honduras RepID=RPB1_PLAFD
Length = 2452
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/61 (67%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 2290 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2349
Query: 388 S 386
S
Sbjct: 2350 S 2350
Score = 84.3 bits (207), Expect = 6e-15
Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P
Sbjct: 2297 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNI 2356
Query: 388 STSQYTP 368
++ Y+P
Sbjct: 2357 ASPNYSP 2363
Score = 81.3 bits (199), Expect = 5e-14
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP++ + + P YSP
Sbjct: 2304 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSP 2363
Query: 391 SS 386
S
Sbjct: 2364 YS 2365
Score = 79.7 bits (195), Expect = 1e-13
Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+ SP YS TSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 2283 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2342
Query: 388 STSQYTP 368
S +Y+P
Sbjct: 2343 S-PKYSP 2348
Score = 66.6 bits (161), Expect = 1e-09
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 19/81 (23%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYN------------------SGTSPDYSPSSPQFSP- 431
SPSYSPTSP+Y+ ++ YSP+SP N S TSP YSP+SP++SP
Sbjct: 2248 SPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPT 2307
Query: 430 STGYSPSQPGYSPSSTSQYTP 368
S YSP+ P YSP+S +Y+P
Sbjct: 2308 SPKYSPTSPKYSPTS-PKYSP 2327
Score = 60.8 bits (146), Expect = 7e-08
Identities = 37/84 (44%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSPDYSPSSPQFSPS--- 428
YSPTSP YSPTSP YSP+SP YS +SP S TSP YS SSP + S
Sbjct: 2332 YSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKSGVV 2391
Query: 427 TGYSPSQPGYSPSSTSQYTPKTND 356
+ P P Y S Q D
Sbjct: 2392 NAHQPMSPAYILQSPVQIKQNVQD 2415
[171][TOP]
>UniRef100_Q54LJ4 Type A von Willebrand factor domain-containing protein n=1
Tax=Dictyostelium discoideum RepID=Q54LJ4_DICDI
Length = 2563
Score = 85.9 bits (211), Expect = 2e-15
Identities = 42/66 (63%), Positives = 49/66 (74%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
YSPTSP Y PTSPSYSP+SP+YSP+SP S TSP YSP+SP +S S Y+ + YSP S
Sbjct: 1846 YSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVS 1905
Query: 385 TSQYTP 368
S YTP
Sbjct: 1906 PS-YTP 1910
Score = 82.0 bits (201), Expect = 3e-14
Identities = 39/60 (65%), Positives = 44/60 (73%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
Y PTSPSYSPTSPSYSP+SP+YSP+SP S TSP YS S S S YSP P Y+P+S
Sbjct: 1853 YIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTS 1912
Score = 80.9 bits (198), Expect = 6e-14
Identities = 44/73 (60%), Positives = 51/73 (69%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GTSPDYSPSSPQFSP-STGYSPSQ 407
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TS YSP SP ++P S Y+P+
Sbjct: 1860 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTSLLYAPTI 1919
Query: 406 PGYSPSSTSQYTP 368
P YSP S S Y P
Sbjct: 1920 PSYSPVSPS-YAP 1931
Score = 69.7 bits (169), Expect = 1e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 21/84 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------------PSSPTYSPSSPYNSGTSPDYSPSSPQFSPS- 428
YSPTSPSYSPTSPSYS P SP+Y+P+S + T P YSP SP ++P+
Sbjct: 1874 YSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTSLLYAPTIPSYSPVSPSYAPTK 1933
Query: 427 -------TGYSPSQPGYSPSSTSQ 377
T YSPS P +S S +
Sbjct: 1934 PSKLPVLTSYSPSSPSFSKSKAKE 1957
Score = 60.5 bits (145), Expect = 9e-08
Identities = 37/84 (44%), Positives = 44/84 (52%), Gaps = 19/84 (22%)
Frame = -3
Query: 565 YSPTSPSYSPTS-------PSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYS--- 416
YSP SPSY+PTS PSYSP SP+Y+P+ P YSPSSP FS S
Sbjct: 1901 YSPVSPSYTPTSLLYAPTIPSYSPVSPSYAPTKPSKLPVLTSYSPSSPSFSKSKAKEEST 1960
Query: 415 ------PSQP---GYSPSSTSQYT 371
PS+P GYS ST ++
Sbjct: 1961 LSEINLPSKPMVAGYSRMSTVSFS 1984
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Frame = -3
Query: 559 PTSPSYS------PTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 401
P PS S P S + S P YSP+SP+ TSP YSP+SP +SP S YSP+ P
Sbjct: 1822 PPPPSTSLGRGAPPPSLFFQASQP-YSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPS 1880
Query: 400 YSPSSTSQYT 371
YSP+S S T
Sbjct: 1881 YSPTSPSYST 1890
[172][TOP]
>UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4MAN9_DROVI
Length = 1889
Score = 85.9 bits (211), Expect = 2e-15
Identities = 42/67 (62%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
YS SPSYSP SPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T YSP+ P YS S
Sbjct: 1680 YSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 388 STSQYTP 368
Y+P
Sbjct: 1740 --PHYSP 1744
Score = 85.9 bits (211), Expect = 2e-15
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPS- 389
YSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S YSP+ P YS +
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTG 1753
Query: 388 -----STSQYTPKTNDNKDDPGT 335
++ Y+P + PG+
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 82.0 bits (201), Expect = 3e-14
Identities = 39/61 (63%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP+S +YS SPSYSP SP+YSPSSP S TSP YSP+SP +SP S Y+P+ P YSP+
Sbjct: 1673 YSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPT 1732
Query: 388 S 386
S
Sbjct: 1733 S 1733
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSP 413
YSPTSP+YSP SPSY +P SP YSP+SP S TSP YSPSSPQ SPS YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 412 SQPGYSPSSTSQYTP 368
+ YS +S +Y+P
Sbjct: 1816 TGSTYSATS-PRYSP 1829
Score = 79.0 bits (193), Expect = 2e-13
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 6/75 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQP 404
YSPTSP+Y+ +SP +YSPSSP YSP+SP + TS Y+ ++P F+P STGYSPS
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSLRYASATPNFNPQSTGYSPSSS 1638
Query: 403 GYSPSSTSQYTPKTN 359
GYSP+S Y+P +N
Sbjct: 1639 GYSPTS-PVYSPTSN 1652
Score = 77.8 bits (190), Expect = 5e-13
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP--------------DYSPSS 446
YSPTSP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+S
Sbjct: 1786 YSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 445 PQFSPST-GYSPSQPGYSPSSTSQYTP 368
P ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 74.7 bits (182), Expect = 4e-12
Identities = 40/73 (54%), Positives = 49/73 (67%), Gaps = 7/73 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQFSPSTG-YSPSQ 407
Y+P SP YSPTSP YSP+SP YSPSSP + S T YS +SP++SP+ YSPS
Sbjct: 1779 YTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 406 PGYSPSSTSQYTP 368
YSP+S + YTP
Sbjct: 1839 TKYSPTSPT-YTP 1850
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS--TGYSPSQPGYSP 392
YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ + YSP+ P YSP
Sbjct: 1820 YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Query: 391 SS 386
SS
Sbjct: 1880 SS 1881
Score = 71.2 bits (173), Expect = 5e-11
Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSP + +YSP+S +YS +SP+YSP SP S +SP YSP+SP +SP S YSP+ P Y+P
Sbjct: 1667 YSPGN-AYSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP- 1724
Query: 388 STSQYTPKTNDNKDDP 341
+T Y+P + + P
Sbjct: 1725 ATPSYSPTSPNYSASP 1740
Score = 70.9 bits (172), Expect = 6e-11
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 28/94 (29%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS------P--------------SSPTYSPSSPYNSGT--SPDYSP 452
Y+P +PSYSPTSP+YS P +SPTYSP SP G+ SP Y+P
Sbjct: 1722 YTPATPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Query: 451 SSPQFSP-STGYSPSQPGYSPSS-----TSQYTP 368
SPQ+SP S YSP+ P YSPSS ++QY+P
Sbjct: 1782 GSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------STGYSPSQ 407
SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+SP S YSP+
Sbjct: 1773 SPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSN-QYSPTGSTYSATSPRYSPNM 1831
Query: 406 PGYSPSSTSQYTP 368
YSPSST +Y+P
Sbjct: 1832 SIYSPSST-KYSP 1843
Score = 69.7 bits (169), Expect = 1e-10
Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 377
SP+YSP+SP+YSP+SP Y+ +S + +P+++P S +SP S+GYSP+ P YSP+S Q
Sbjct: 1595 SPNYSPSSPNYSPTSPLYTATSLRYASATPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQ 1654
Query: 376 YTPK---TNDNKDDPG 338
+P + N PG
Sbjct: 1655 SSPSFAGSGSNMYSPG 1670
Score = 64.7 bits (156), Expect = 5e-09
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSPS 428
YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F S
Sbjct: 1841 YSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 60.8 bits (146), Expect = 7e-08
Identities = 47/122 (38%), Positives = 52/122 (42%), Gaps = 54/122 (44%)
Frame = -3
Query: 565 YSPTSP----------------------------SYSPTSPSYSP-----SSPT------ 503
YSPTSP YSPTSP YSP SSP+
Sbjct: 1605 YSPTSPLYTATSLRYASATPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGS 1664
Query: 502 --------YSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPSSTS------QYTP 368
YSPSS S SP YSP SP +SPS+ YSP+ P YSP+S S YTP
Sbjct: 1665 NMYSPGNAYSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP 1724
Query: 367 KT 362
T
Sbjct: 1725 AT 1726
Score = 54.7 bits (130), Expect = 5e-06
Identities = 35/68 (51%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--------TYSPS-SPYNSGTSPDYSPSSPQFSPSTGYSPS 410
S SPS+SP P SPSSP + SPS SP S TSP+Y+ SSP S YSPS
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPHFSTSPSVSPSYSPTSPNYTASSPG-GASPNYSPS 1601
Query: 409 QPGYSPSS 386
P YSP+S
Sbjct: 1602 SPNYSPTS 1609
[173][TOP]
>UniRef100_C5FCL2 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FCL2_NANOT
Length = 1748
Score = 85.5 bits (210), Expect = 3e-15
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 11/86 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-------QFSP----STGY 419
YSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP SP S Y
Sbjct: 1638 YSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSPTSPALGGTGRHLSPTSPTSPKY 1697
Query: 418 SPSQPGYSPSSTSQYTPKTNDNKDDP 341
+P+ PG+SP+S Y+P + + P
Sbjct: 1698 TPTSPGWSPTSPEAYSPTSPNFSGSP 1723
Score = 81.6 bits (200), Expect = 4e-14
Identities = 40/65 (61%), Positives = 50/65 (76%), Gaps = 5/65 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 401
++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP FSP S +SP+ P
Sbjct: 1613 FAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPS 1672
Query: 400 YSPSS 386
YSP+S
Sbjct: 1673 YSPTS 1677
Score = 72.8 bits (177), Expect = 2e-11
Identities = 35/62 (56%), Positives = 46/62 (74%), Gaps = 5/62 (8%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSP----YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
+SP++SP SPS++P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +SP
Sbjct: 1602 SSPAFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSP 1661
Query: 391 SS 386
+S
Sbjct: 1662 AS 1663
Score = 65.9 bits (159), Expect = 2e-09
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 24/85 (28%)
Frame = -3
Query: 562 SPTSPSYSP------T-------------SPSYSPSSPTYSPSSPYNSGTSPDY----SP 452
SPTSP+YSP T SP++SP+SP+++P+SP S TSP Y SP
Sbjct: 1574 SPTSPAYSPSSGYSPTSPGMSITSPRFISSPAFSPASPSFAPTSPAYSPTSPGYGQAQSP 1633
Query: 451 SSPQFSP-STGYSPSQPGYSPSSTS 380
+SP +SP S G+SP+ P YSP+S S
Sbjct: 1634 TSPSYSPTSPGFSPTSPSYSPTSPS 1658
Score = 62.8 bits (151), Expect = 2e-08
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 13/76 (17%)
Frame = -3
Query: 565 YSPTSPSY----------SPTSPSYSPSSPTYSPSSP-YNSGTSPDY--SPSSPQFSPST 425
YSPTSP+ SPTSP Y+P+SP +SP+SP S TSP++ SP+SP S
Sbjct: 1673 YSPTSPALGGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFSGSPTSPGGPTSP 1732
Query: 424 GYSPSQPGYSPSSTSQ 377
GYSP+ P ++P+S Q
Sbjct: 1733 GYSPTSPTFNPTSPRQ 1748
Score = 62.0 bits (149), Expect = 3e-08
Identities = 37/62 (59%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSP+SP + SPTSP+YSPSS YSP+SP S TSP + SSP FSP S ++P+ P YSP
Sbjct: 1565 YSPSSPFNTSPTSPAYSPSSG-YSPTSPGMSITSPRFI-SSPAFSPASPSFAPTSPAYSP 1622
Query: 391 SS 386
+S
Sbjct: 1623 TS 1624
Score = 53.9 bits (128), Expect = 8e-06
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSP 392
Y P PSY SP + P SP YSPSSP+N+ SP+SP +SPS+GYSP+ PG S
Sbjct: 1545 YQP--PSYGGFSP-HEPRSPGGGYSPSSPFNT------SPTSPAYSPSSGYSPTSPGMSI 1595
Query: 391 SS 386
+S
Sbjct: 1596 TS 1597
[174][TOP]
>UniRef100_Q5KGG3 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KGG3_CRYNE
Length = 1786
Score = 85.1 bits (209), Expect = 3e-15
Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 9/75 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGTSPDYSPSSPQFSP--------STGYSP 413
YSPTSP YSPTSP++SP+SP+YSP+SP TSP YSP+SPQFSP S YSP
Sbjct: 1666 YSPTSPRYSPTSPAFSPTSPSYSPTSPAPFQATSPRYSPTSPQFSPTSPTYSPASPAYSP 1725
Query: 412 SQPGYSPSSTSQYTP 368
+ P YSP+S + Y+P
Sbjct: 1726 TSPQYSPTSPA-YSP 1739
Score = 82.8 bits (203), Expect = 2e-14
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+ TSP YSPTSP +SP+SPTYSP+SP S TSP YSP+SP +SP S YSP+ P Y +
Sbjct: 1695 FQATSPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYGGA 1754
Query: 388 STSQYTPKTNDNKDDPG 338
+ + T + + + PG
Sbjct: 1755 APNGGTAQQQNGQARPG 1771
Score = 80.1 bits (196), Expect = 1e-13
Identities = 46/86 (53%), Positives = 55/86 (63%), Gaps = 20/86 (23%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG------------TSPDYSPSSP------- 443
YSPTSP +SPTSPS+SPSSPTYSP+SP G TSP YSP+SP
Sbjct: 1605 YSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSPTSPMGGITSP 1664
Query: 442 QFSP-STGYSPSQPGYSPSSTSQYTP 368
Q+SP S YSP+ P +SP+S S Y+P
Sbjct: 1665 QYSPTSPRYSPTSPAFSPTSPS-YSP 1689
Score = 79.3 bits (194), Expect = 2e-13
Identities = 47/89 (52%), Positives = 54/89 (60%), Gaps = 23/89 (25%)
Frame = -3
Query: 565 YSPTSPSYSP-------TSPSYSPSSPTYSPSSPYNS---------------GTSPDYSP 452
YSPTSP+YSP TSP YSP+SP YSP+SP S TSP YSP
Sbjct: 1645 YSPTSPAYSPTSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAPFQATSPRYSP 1704
Query: 451 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 368
+SPQFSP S YSP+ P YSP+S QY+P
Sbjct: 1705 TSPQFSPTSPTYSPASPAYSPTS-PQYSP 1732
Score = 76.3 bits (186), Expect = 2e-12
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 12/78 (15%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF------SPSTGYSPSQP 404
Y TSP+YSPTSP YSP+SP +SP+SP S +SP YSP+SP + + ++ YSP+ P
Sbjct: 1591 YGATSPAYSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSP 1650
Query: 403 GYSPSS------TSQYTP 368
YSP+S + QY+P
Sbjct: 1651 AYSPTSPMGGITSPQYSP 1668
Score = 65.9 bits (159), Expect = 2e-09
Identities = 40/85 (47%), Positives = 50/85 (58%), Gaps = 25/85 (29%)
Frame = -3
Query: 565 YSPTSPS-YSPTSPSYSPSSPTYSPSSPY-----------------------NSGTSPDY 458
YSP+SP+ YSPTSP ++ +SP YSP+SP+ S TSP Y
Sbjct: 1547 YSPSSPAGYSPTSP-FAVTSPAYSPTSPFAGAAAGAASPWVGRGGYGATSPAYSPTSPQY 1605
Query: 457 SPSSPQFSP-STGYSPSQPGYSPSS 386
SP+SPQFSP S +SPS P YSP+S
Sbjct: 1606 SPTSPQFSPTSPSFSPSSPTYSPAS 1630
Score = 63.5 bits (153), Expect = 1e-08
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 17/81 (20%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY----------------SPSSPTYSPSSPYNSGTSPDYSPSSPQFS 434
+SP+SP+YSP SP+Y P YSP+SP TSP YSP+SP++S
Sbjct: 1619 FSPSSPTYSPASPAYGGAGAGNRASPYSPTS----PAYSPTSPMGGITSPQYSPTSPRYS 1674
Query: 433 P-STGYSPSQPGYSPSSTSQY 374
P S +SP+ P YSP+S + +
Sbjct: 1675 PTSPAFSPTSPSYSPTSPAPF 1695
[175][TOP]
>UniRef100_B3L428 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L428_PLAKH
Length = 2353
Score = 84.7 bits (208), Expect = 4e-15
Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY--SPSQPGYSP 392
YSPTSP Y PTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP++ SPS P YSP
Sbjct: 2205 YSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNSPSSPHYSP 2264
Score = 84.3 bits (207), Expect = 6e-15
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+ TSP YSPTSP YSP+SP Y P+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 2191 YAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPT 2250
Query: 388 STSQYTPKT 362
S +P +
Sbjct: 2251 SPVPNSPSS 2259
Score = 84.3 bits (207), Expect = 6e-15
Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP YSPTSP Y P+SP YSP+SP S TSP YSP+SP++SP S YSP+ P +
Sbjct: 2198 YSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNSP 2257
Query: 388 STSQYTP 368
S+ Y+P
Sbjct: 2258 SSPHYSP 2264
Score = 78.6 bits (192), Expect = 3e-13
Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+S SP+Y+ TSP YSP+SP YSP+SP TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 2184 HSVLSPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2243
Query: 388 STSQYTP 368
S QY+P
Sbjct: 2244 S-PQYSP 2249
Score = 65.1 bits (157), Expect = 4e-09
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQFSP-STGYSPSQPGY 398
YSPTSP YSPTSP YSP+SP P+SP +SP YSP +SP+FSP S YS S P Y
Sbjct: 2233 YSPTSPKYSPTSPQYSPTSPV--PNSP----SSPHYSPYAIASPKFSPTSPAYSISSPVY 2286
Query: 397 SPSSTSQ 377
SS ++
Sbjct: 2287 DQSSNAR 2293
Score = 55.1 bits (131), Expect = 4e-06
Identities = 40/111 (36%), Positives = 50/111 (45%), Gaps = 49/111 (44%)
Frame = -3
Query: 553 SPSYSPTSPS---------------------YSP-------------------------- 515
SPSYSPTSP+ YSP
Sbjct: 2133 SPSYSPTSPTYHLSSNVNAGGSSGLNDTKAFYSPTSPKNQMDEMNPNMMKYHSVLSPAYA 2192
Query: 514 -SSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 368
+SP YSP+SP S TSP Y P+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 2193 VTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2242
[176][TOP]
>UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q7SDN0_NEUCR
Length = 1752
Score = 84.7 bits (208), Expect = 4e-15
Identities = 46/88 (52%), Positives = 56/88 (63%), Gaps = 13/88 (14%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPT---YSPSSPYN--SGTSPDYSPSSPQFSP--------STG 422
SPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S
Sbjct: 1631 SPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSPTSPSYSPTSPSYSPASPAFQATSPS 1690
Query: 421 YSPSQPGYSPSSTSQYTPKTNDNKDDPG 338
YSP+ P +SP+S Y+P + + PG
Sbjct: 1691 YSPASPTWSPTSPDAYSPTSPSFQRSPG 1718
Score = 82.8 bits (203), Expect = 2e-14
Identities = 49/87 (56%), Positives = 59/87 (67%), Gaps = 11/87 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP-------SSPTYSPSSPYNSGTSPD-YSPSSPQF--SPSTGYS 416
+SPTSPSYSPTSPSYSP +SP+YSP+SP S TSPD YSP+SP F SP S
Sbjct: 1663 FSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPTWSPTSPDAYSPTSPSFQRSPGQQLS 1722
Query: 415 PSQP-GYSPSSTSQYTPKTNDNKDDPG 338
P+ P GYSP+S QY+P+T + G
Sbjct: 1723 PTSPTGYSPTS-PQYSPRTPGRNNSGG 1748
Score = 65.9 bits (159), Expect = 2e-09
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 9/72 (12%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDYSPSSP------QFSPSTGYSPSQP 404
+SP +SP+SPS+SP+SP SP+SP S TSP YSP+SP SP+ +SP+ P
Sbjct: 1609 SSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSPTSP 1668
Query: 403 GYSPSSTSQYTP 368
YSP+S S Y+P
Sbjct: 1669 SYSPTSPS-YSP 1679
Score = 59.7 bits (143), Expect = 1e-07
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Frame = -3
Query: 565 YSPTSP----SYSPTSPS--YSPSSPTYSP-----SSPYNSGTSPDYSPSSPQFSP---- 431
++PTSP YSP+SP+ YSPSSP SSP S +SP +SP+SP P
Sbjct: 1574 FTPTSPFSYGGYSPSSPAAGYSPSSPLLDSAGRFASSPQFSPSSPSFSPTSPMLRPGSPT 1633
Query: 430 STGYSPSQPGYSPSS--TSQYTPKTNDNKDDP 341
S YSP+ P YSP+S ++Y+P + + P
Sbjct: 1634 SPSYSPTSPSYSPASPAAARYSPTSPAQQFSP 1665
[177][TOP]
>UniRef100_B6H9U6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6H9U6_PENCW
Length = 1733
Score = 84.7 bits (208), Expect = 4e-15
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 10/85 (11%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP------QFSP----STGYS 416
YSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP SP S Y+
Sbjct: 1627 YSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYT 1686
Query: 415 PSQPGYSPSSTSQYTPKTNDNKDDP 341
P+ PG+SP+S Y+P + + P
Sbjct: 1687 PTSPGWSPTSPQSYSPTSPNFSGSP 1711
Score = 83.6 bits (205), Expect = 1e-14
Identities = 40/64 (62%), Positives = 51/64 (79%), Gaps = 4/64 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
+ PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP FSP S +SP+ P Y
Sbjct: 1603 FQPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSY 1662
Query: 397 SPSS 386
SP+S
Sbjct: 1663 SPTS 1666
Score = 77.8 bits (190), Expect = 5e-13
Identities = 38/70 (54%), Positives = 52/70 (74%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
+SP SP++ PTSP+YSP+SP Y SP+SP S TSP +SP+SP +SP S +SP+ P +
Sbjct: 1596 FSPASPTFQPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAF 1655
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1656 SPTSPS-YSP 1664
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSP---YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
TSP +SP SP++ P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +SP+
Sbjct: 1592 TSPGFSPASPTFQPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPA 1651
Query: 388 S 386
S
Sbjct: 1652 S 1652
Score = 67.4 bits (163), Expect = 7e-10
Identities = 42/88 (47%), Positives = 50/88 (56%), Gaps = 26/88 (29%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPS---------------------SPTYSPSSPYNSGTSPDY-- 458
YSPTSP + SPTSP YSPS SPT+ P+SP S TSP Y
Sbjct: 1560 YSPTSPFNTSPTSPGYSPSSSYSPTSPGIGMMTSPGFSPASPTFQPTSPAYSPTSPAYGQ 1619
Query: 457 -SPSSPQFSP-STGYSPSQPGYSPSSTS 380
SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1620 ASPTSPSYSPTSPGFSPTSPNYSPTSPS 1647
Score = 64.3 bits (155), Expect = 6e-09
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 17/80 (21%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS----------------YSPSSPTYSPSSPYN-SGTSPDYSPSSPQF 437
+SPTSPSYSPTSP+ Y+P+SP +SP+SP + S TSP++S SP
Sbjct: 1655 FSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNFS-GSPTS 1713
Query: 436 SPSTGYSPSQPGYSPSSTSQ 377
S YSP+ P YSP+S Q
Sbjct: 1714 PTSPAYSPTSPAYSPTSPRQ 1733
[178][TOP]
>UniRef100_C6F1F6 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F6_PLAVI
Length = 211
Score = 84.0 bits (206), Expect = 7e-15
Identities = 40/59 (67%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY--SPSQPGYSP 392
SPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SPS+ +PS P YSP
Sbjct: 64 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 122
Score = 80.5 bits (197), Expect = 8e-14
Identities = 40/67 (59%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS TSP SPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSPS P +
Sbjct: 56 YSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNP 115
Query: 388 STSQYTP 368
S+ Y+P
Sbjct: 116 SSPHYSP 122
Score = 79.0 bits (193), Expect = 2e-13
Identities = 42/72 (58%), Positives = 47/72 (65%), Gaps = 12/72 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS--------PSSPQFSP----STG 422
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YS PSSP +SP S
Sbjct: 70 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPK 129
Query: 421 YSPSQPGYSPSS 386
+SP+ P YS SS
Sbjct: 130 FSPTSPAYSISS 141
Score = 77.0 bits (188), Expect = 9e-13
Identities = 39/69 (56%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+S SP YS TSP SP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSPS
Sbjct: 49 HSVVSPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 108
Query: 388 STSQYTPKT 362
S P +
Sbjct: 109 SPVPNNPSS 117
Score = 62.8 bits (151), Expect = 2e-08
Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 41/109 (37%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS--------------YSPSSPT--------------------YSPSS 488
YSPTSP+Y T+P+ YSP+SPT YS +S
Sbjct: 1 YSPTSPTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTS 60
Query: 487 PYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS------TSQYTPKT 362
P S TSP YSP+SP++SP S YSP+ P YSP+S + QY+P +
Sbjct: 61 PKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSS 109
[179][TOP]
>UniRef100_Q9HGZ5 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=Q9HGZ5_ASPOR
Length = 1748
Score = 84.0 bits (206), Expect = 7e-15
Identities = 40/64 (62%), Positives = 52/64 (81%), Gaps = 4/64 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
++PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP FSP S +SP+ P Y
Sbjct: 1614 FAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSY 1673
Query: 397 SPSS 386
SP+S
Sbjct: 1674 SPTS 1677
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 11/86 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-------QFSP----STGY 419
YSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP SP S Y
Sbjct: 1638 YSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAARHLSPTSPTSPKY 1697
Query: 418 SPSQPGYSPSSTSQYTPKTNDNKDDP 341
+P+ PG+SP+S Y+P + + P
Sbjct: 1698 TPTSPGWSPTSPQTYSPTSPNFAGSP 1723
Score = 79.3 bits (194), Expect = 2e-13
Identities = 39/70 (55%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
+SP SPS++PTSP+YSP+SP Y SP+SP S TSP +SP+SP +SP S +SP+ P +
Sbjct: 1607 FSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAF 1666
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1667 SPTSPS-YSP 1675
Score = 75.9 bits (185), Expect = 2e-12
Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 4/64 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP---YNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
+S TSP +SP SPS++P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +
Sbjct: 1600 FSMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSF 1659
Query: 397 SPSS 386
SP+S
Sbjct: 1660 SPAS 1663
Score = 70.5 bits (171), Expect = 8e-11
Identities = 38/70 (54%), Positives = 50/70 (71%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP---QFSP-STGYSPSQPGY 398
YSPTSP + TSP +S +SP +SP+SP + TSP YSP+SP Q SP S YSP+ PG+
Sbjct: 1586 YSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGF 1645
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1646 SPTSPN-YSP 1654
Score = 67.0 bits (162), Expect = 9e-10
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 13/76 (17%)
Frame = -3
Query: 565 YSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPDY--SPSSPQFSPST 425
YSPTSP+ SPTSP Y+P+SP +SP+SP S TSP++ SP+SP S
Sbjct: 1673 YSPTSPAIGGAARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSP 1732
Query: 424 GYSPSQPGYSPSSTSQ 377
GYSP+ P +SPSS Q
Sbjct: 1733 GYSPTSPAFSPSSPRQ 1748
Score = 66.6 bits (161), Expect = 1e-09
Identities = 36/62 (58%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSP+SP S +PTSP YSPSS +YSP+SP + TSP +S +SP FSP S ++P+ P YSP
Sbjct: 1565 YSPSSPFSANPTSPGYSPSS-SYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSP 1623
Query: 391 SS 386
+S
Sbjct: 1624 TS 1625
Score = 66.6 bits (161), Expect = 1e-09
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 18/80 (22%)
Frame = -3
Query: 565 YSPTSPSYSP--------------TSPSYSPSSPTYSPSSPYNSGTSPDY---SPSSPQF 437
YSP+S SYSP TSP +SP+SP+++P+SP S TSP Y SP+SP +
Sbjct: 1580 YSPSS-SYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSY 1638
Query: 436 SP-STGYSPSQPGYSPSSTS 380
SP S G+SP+ P YSP+S S
Sbjct: 1639 SPTSPGFSPTSPNYSPTSPS 1658
[180][TOP]
>UniRef100_C8VQG7 DNA-directed RNA polymerase (EC 2.7.7.6)
[Source:UniProtKB/TrEMBL;Acc:Q873Q6] n=2 Tax=Emericella
nidulans RepID=C8VQG7_EMENI
Length = 1745
Score = 84.0 bits (206), Expect = 7e-15
Identities = 40/64 (62%), Positives = 52/64 (81%), Gaps = 4/64 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
++PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP FSP S +SP+ P Y
Sbjct: 1612 FAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSY 1671
Query: 397 SPSS 386
SP+S
Sbjct: 1672 SPTS 1675
Score = 84.0 bits (206), Expect = 7e-15
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 17/91 (18%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------- 431
SPTSPSYSPTSP +SP+SP YSP+SP S TSP +SP+SP +SP
Sbjct: 1630 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPTSPAIGGARHLSPTSP 1689
Query: 430 -STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 341
S Y+P+ PG+SP+S Y+P + + P
Sbjct: 1690 TSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1720
Score = 79.3 bits (194), Expect = 2e-13
Identities = 39/70 (55%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
+SP SPS++PTSP+YSP+SP Y SP+SP S TSP +SP+SP +SP S +SP+ P +
Sbjct: 1605 FSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAF 1664
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1665 SPTSPS-YSP 1673
Score = 76.6 bits (187), Expect = 1e-12
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 11/77 (14%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG---------TSPDYSPSSPQFSPST--GY 419
YSPTSPS+SPTSP++SP+SP+YSP+SP G TSP Y+P+SP +SP++ Y
Sbjct: 1650 YSPTSPSFSPTSPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQTY 1709
Query: 418 SPSQPGYSPSSTSQYTP 368
SP+ P ++ S TS P
Sbjct: 1710 SPTSPNFAGSPTSPGGP 1726
Score = 73.9 bits (180), Expect = 8e-12
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 4/61 (6%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSP---YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
TSP +SP SPS++P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +SP+
Sbjct: 1601 TSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPT 1660
Query: 388 S 386
S
Sbjct: 1661 S 1661
Score = 64.7 bits (156), Expect = 5e-09
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 17/82 (20%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPT-------------YSPSSPYNSGTSPDYSPSSP---QFSP 431
+PTSP YSPTS SYSP+SP +SP+SP + TSP YSP+SP Q SP
Sbjct: 1573 NPTSPGYSPTS-SYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASP 1631
Query: 430 -STGYSPSQPGYSPSSTSQYTP 368
S YSP+ PG+SP+S + Y+P
Sbjct: 1632 TSPSYSPTSPGFSPTSPN-YSP 1652
Score = 63.2 bits (152), Expect = 1e-08
Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 9/55 (16%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP-TYSPSSPYNSG--------TSPDYSPSSPQFSPST 425
SPTSP Y+PTSP +SP+SP TYSP+SP +G TSP YSP+SP FSP++
Sbjct: 1688 SPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPTS 1742
Score = 58.9 bits (141), Expect = 3e-07
Identities = 34/62 (54%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSP+SP S +PTSP YSP+S +YSP+SP TSP + +SP FSP S ++P+ P YSP
Sbjct: 1564 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFM-TSPGFSPASPSFAPTSPAYSP 1621
Query: 391 SS 386
+S
Sbjct: 1622 TS 1623
[181][TOP]
>UniRef100_B0XMU6 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XMU6_ASPFC
Length = 1750
Score = 84.0 bits (206), Expect = 7e-15
Identities = 40/64 (62%), Positives = 52/64 (81%), Gaps = 4/64 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
++PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP FSP S +SP+ P Y
Sbjct: 1613 FAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSY 1672
Query: 397 SPSS 386
SP+S
Sbjct: 1673 SPTS 1676
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 11/86 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-------QFSP----STGY 419
YSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP SP S Y
Sbjct: 1637 YSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKY 1696
Query: 418 SPSQPGYSPSSTSQYTPKTNDNKDDP 341
+P+ PG+SP+S Y+P + + P
Sbjct: 1697 TPTSPGWSPTSPQTYSPTSPNFAGSP 1722
Score = 79.3 bits (194), Expect = 2e-13
Identities = 39/70 (55%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
+SP SPS++PTSP+YSP+SP Y SP+SP S TSP +SP+SP +SP S +SP+ P +
Sbjct: 1606 FSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAF 1665
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1666 SPTSPS-YSP 1674
Score = 73.9 bits (180), Expect = 8e-12
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 4/61 (6%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSP---YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
TSP +SP SPS++P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +SP+
Sbjct: 1602 TSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPA 1661
Query: 388 S 386
S
Sbjct: 1662 S 1662
Score = 64.7 bits (156), Expect = 5e-09
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 17/82 (20%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPT-------------YSPSSPYNSGTSPDYSPSSP---QFSP 431
+PTSP YSPTS SYSP+SP +SP+SP + TSP YSP+SP Q SP
Sbjct: 1574 NPTSPGYSPTS-SYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASP 1632
Query: 430 -STGYSPSQPGYSPSSTSQYTP 368
S YSP+ PG+SP+S + Y+P
Sbjct: 1633 TSPSYSPTSPGFSPTSPN-YSP 1653
Score = 64.7 bits (156), Expect = 5e-09
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 13/82 (15%)
Frame = -3
Query: 565 YSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPDY--SPSSPQFSPST 425
YSPTSP+ SPTSP Y+P+SP +SP+SP S TSP++ SP+SP S
Sbjct: 1672 YSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSP 1731
Query: 424 GYSPSQPGYSPSSTSQYTPKTN 359
GYSP+ P +SPS Y P ++
Sbjct: 1732 GYSPTSPAFSPS----YVPSSS 1749
Score = 58.9 bits (141), Expect = 3e-07
Identities = 34/62 (54%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSP+SP S +PTSP YSP+S +YSP+SP TSP + +SP FSP S ++P+ P YSP
Sbjct: 1565 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFM-TSPGFSPASPSFAPTSPAYSP 1622
Query: 391 SS 386
+S
Sbjct: 1623 TS 1624
[182][TOP]
>UniRef100_A2QAT7 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QAT7_ASPNC
Length = 1747
Score = 84.0 bits (206), Expect = 7e-15
Identities = 40/64 (62%), Positives = 52/64 (81%), Gaps = 4/64 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
++PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP FSP S +SP+ P Y
Sbjct: 1613 FAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSY 1672
Query: 397 SPSS 386
SP+S
Sbjct: 1673 SPTS 1676
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 11/86 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-------QFSP----STGY 419
YSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP SP S Y
Sbjct: 1637 YSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAVGGVGRHLSPTSPTSPKY 1696
Query: 418 SPSQPGYSPSSTSQYTPKTNDNKDDP 341
+P+ PG+SP+S Y+P + + P
Sbjct: 1697 TPTSPGWSPTSPQTYSPTSPNFAGSP 1722
Score = 79.3 bits (194), Expect = 2e-13
Identities = 39/70 (55%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
+SP SPS++PTSP+YSP+SP Y SP+SP S TSP +SP+SP +SP S +SP+ P +
Sbjct: 1606 FSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAF 1665
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1666 SPTSPS-YSP 1674
Score = 74.3 bits (181), Expect = 6e-12
Identities = 36/64 (56%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP---YNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
+ TSP +SP SPS++P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +
Sbjct: 1599 FMSTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSF 1658
Query: 397 SPSS 386
SP+S
Sbjct: 1659 SPAS 1662
Score = 68.6 bits (166), Expect = 3e-10
Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP---QFSP-STGYSPSQPGY 398
YSPTSP + TSP + +SP +SP+SP + TSP YSP+SP Q SP S YSP+ PG+
Sbjct: 1585 YSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGF 1644
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1645 SPTSPN-YSP 1653
Score = 66.6 bits (161), Expect = 1e-09
Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY---S 395
+PTSP YSPTS SYSP+SP + +SP TSP +SP+SP F+P S YSP+ P Y S
Sbjct: 1573 NPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSPTSPAYGQAS 1631
Query: 394 PSSTSQYTP 368
P+S S Y+P
Sbjct: 1632 PTSPS-YSP 1639
Score = 65.9 bits (159), Expect = 2e-09
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 13/76 (17%)
Frame = -3
Query: 565 YSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPDY--SPSSPQFSPST 425
YSPTSP+ SPTSP Y+P+SP +SP+SP S TSP++ SP+SP S
Sbjct: 1672 YSPTSPAVGGVGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSP 1731
Query: 424 GYSPSQPGYSPSSTSQ 377
GYSP+ P +SP+S Q
Sbjct: 1732 GYSPTSPAFSPTSPRQ 1747
Score = 63.5 bits (153), Expect = 1e-08
Identities = 34/62 (54%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSP+SP S +PTSP YSP+S +YSP+SP + TSP + +SP FSP S ++P+ P YSP
Sbjct: 1564 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSP 1622
Query: 391 SS 386
+S
Sbjct: 1623 TS 1624
[183][TOP]
>UniRef100_A1D1U9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D1U9_NEOFI
Length = 1750
Score = 84.0 bits (206), Expect = 7e-15
Identities = 40/64 (62%), Positives = 52/64 (81%), Gaps = 4/64 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
++PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP FSP S +SP+ P Y
Sbjct: 1613 FAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSY 1672
Query: 397 SPSS 386
SP+S
Sbjct: 1673 SPTS 1676
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 11/86 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-------QFSP----STGY 419
YSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP SP S Y
Sbjct: 1637 YSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKY 1696
Query: 418 SPSQPGYSPSSTSQYTPKTNDNKDDP 341
+P+ PG+SP+S Y+P + + P
Sbjct: 1697 TPTSPGWSPTSPQTYSPTSPNFAGSP 1722
Score = 79.3 bits (194), Expect = 2e-13
Identities = 39/70 (55%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
+SP SPS++PTSP+YSP+SP Y SP+SP S TSP +SP+SP +SP S +SP+ P +
Sbjct: 1606 FSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAF 1665
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1666 SPTSPS-YSP 1674
Score = 73.9 bits (180), Expect = 8e-12
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 4/61 (6%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSP---YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
TSP +SP SPS++P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +SP+
Sbjct: 1602 TSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPA 1661
Query: 388 S 386
S
Sbjct: 1662 S 1662
Score = 64.7 bits (156), Expect = 5e-09
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 17/82 (20%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPT-------------YSPSSPYNSGTSPDYSPSSP---QFSP 431
+PTSP YSPTS SYSP+SP +SP+SP + TSP YSP+SP Q SP
Sbjct: 1574 NPTSPGYSPTS-SYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASP 1632
Query: 430 -STGYSPSQPGYSPSSTSQYTP 368
S YSP+ PG+SP+S + Y+P
Sbjct: 1633 TSPSYSPTSPGFSPTSPN-YSP 1653
Score = 64.7 bits (156), Expect = 5e-09
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 13/82 (15%)
Frame = -3
Query: 565 YSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPDY--SPSSPQFSPST 425
YSPTSP+ SPTSP Y+P+SP +SP+SP S TSP++ SP+SP S
Sbjct: 1672 YSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSP 1731
Query: 424 GYSPSQPGYSPSSTSQYTPKTN 359
GYSP+ P +SPS Y P ++
Sbjct: 1732 GYSPTSPAFSPS----YVPSSS 1749
Score = 58.9 bits (141), Expect = 3e-07
Identities = 34/62 (54%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YSP+SP S +PTSP YSP+S +YSP+SP TSP + +SP FSP S ++P+ P YSP
Sbjct: 1565 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFM-TSPGFSPASPSFAPTSPAYSP 1622
Query: 391 SS 386
+S
Sbjct: 1623 TS 1624
[184][TOP]
>UniRef100_A1CNZ4 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CNZ4_ASPCL
Length = 1765
Score = 84.0 bits (206), Expect = 7e-15
Identities = 40/64 (62%), Positives = 52/64 (81%), Gaps = 4/64 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
++PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP FSP S +SP+ P Y
Sbjct: 1620 FAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSY 1679
Query: 397 SPSS 386
SP+S
Sbjct: 1680 SPTS 1683
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 11/86 (12%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-------QFSP----STGY 419
YSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP SP S Y
Sbjct: 1644 YSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKY 1703
Query: 418 SPSQPGYSPSSTSQYTPKTNDNKDDP 341
+P+ PG+SP+S Y+P + + P
Sbjct: 1704 TPTSPGWSPTSPQTYSPTSPNFAGSP 1729
Score = 79.3 bits (194), Expect = 2e-13
Identities = 39/70 (55%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
+SP SPS++PTSP+YSP+SP Y SP+SP S TSP +SP+SP +SP S +SP+ P +
Sbjct: 1613 FSPVSPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAF 1672
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1673 SPTSPS-YSP 1681
Score = 73.9 bits (180), Expect = 8e-12
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 4/61 (6%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSP---YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
TSP +SP SPS++P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P +SP+
Sbjct: 1609 TSPGFSPVSPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPA 1668
Query: 388 S 386
S
Sbjct: 1669 S 1669
Score = 64.3 bits (155), Expect = 6e-09
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 13/72 (18%)
Frame = -3
Query: 565 YSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPDY--SPSSPQFSPST 425
YSPTSP+ SPTSP Y+P+SP +SP+SP S TSP++ SP+SP S
Sbjct: 1679 YSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSP 1738
Query: 424 GYSPSQPGYSPS 389
GYSP+ P +SPS
Sbjct: 1739 GYSPTSPAFSPS 1750
Score = 61.6 bits (148), Expect = 4e-08
Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-SYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYS 395
Y+PTSP +SPTSP +YSP+SP + SP+SP TSP YSP+SP FSPS Y P P
Sbjct: 1703 YTPTSPGWSPTSPQTYSPTSPNFAGSPTSP-GGPTSPGYSPTSPAFSPS--YVPPPPCLI 1759
Query: 394 PSSTS 380
TS
Sbjct: 1760 DDCTS 1764
Score = 61.2 bits (147), Expect = 5e-08
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 21/83 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTS-----------------PSYSPSSPTYSPSSPYNSGTSPDY---SPSS 446
YSPT+ SYSP + P +SP SP+++P+SP S TSP Y SP+S
Sbjct: 1583 YSPTT-SYSPIAPGITSPRFNTSPGFMTSPGFSPVSPSFAPTSPAYSPTSPAYGQASPTS 1641
Query: 445 PQFSP-STGYSPSQPGYSPSSTS 380
P +SP S G+SP+ P YSP+S S
Sbjct: 1642 PSYSPTSPGFSPTSPNYSPTSPS 1664
Score = 55.8 bits (133), Expect = 2e-06
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 24/84 (28%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPS-----------------------SPTYSPSSPYNSGTSPDY 458
YSPTSP S +PTSP YSP+ SP +SP SP + TSP Y
Sbjct: 1568 YSPTSPFSANPTSPGYSPTTSYSPIAPGITSPRFNTSPGFMTSPGFSPVSPSFAPTSPAY 1627
Query: 457 SPSSPQFSPSTGYSPSQPGYSPSS 386
SP+SP + + SP+ P YSP+S
Sbjct: 1628 SPTSPAYGQA---SPTSPSYSPTS 1648
[185][TOP]
>UniRef100_C6F1F5 RNA polymerase II (Fragment) n=1 Tax=Plasmodium fragile
RepID=C6F1F5_PLAFR
Length = 210
Score = 83.6 bits (205), Expect = 1e-14
Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY--SPSQPGYSP 392
YSPTSP YSPTSP Y P+SP YSP+SP S TSP YSP+SPQ+SP++ +PS P YSP
Sbjct: 63 YSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSP 122
Score = 80.1 bits (196), Expect = 1e-13
Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS TSP YSPTSP YSP+SP Y P+SP S TSP YSP+SP++SP S YSP+ P +
Sbjct: 56 YSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNP 115
Query: 388 STSQYTP 368
S+ Y+P
Sbjct: 116 SSPHYSP 122
Score = 77.4 bits (189), Expect = 7e-13
Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+S SP YS TSP YSP+SP YSP+SP TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPT 108
Query: 388 STSQYTPKT 362
S P +
Sbjct: 109 SPIPNNPSS 117
Score = 75.1 bits (183), Expect = 3e-12
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 5/68 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPG 401
YSPTSP YSPTSP YSP+SP YSP+SP N+ +SP YSP +SP+FSP S YS S P
Sbjct: 84 YSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSPYAIASPKFSPTSPAYSISSPV 143
Query: 400 YSPSSTSQ 377
Y S+ ++
Sbjct: 144 YDRSANAR 151
Score = 63.9 bits (154), Expect = 8e-09
Identities = 43/108 (39%), Positives = 53/108 (49%), Gaps = 42/108 (38%)
Frame = -3
Query: 565 YSPTSPS---------------------YSPTSPS--------------------YSPSS 509
YSPTSP+ YSPTSP+ YS +S
Sbjct: 1 YSPTSPTYHLSNNANAGGSAGLNDPKSFYSPTSPTNQLGEMNPNMMKYHSVVSPVYSVTS 60
Query: 508 PTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 368
P YSP+SP S TSP Y P+SP++SP S YSP+ P YSP+S QY+P
Sbjct: 61 PKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTS-PQYSP 107
[186][TOP]
>UniRef100_Q2HDK0 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2HDK0_CHAGB
Length = 1756
Score = 83.6 bits (205), Expect = 1e-14
Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 10/77 (12%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPD-YSPSSPQF--SPSTGYSP 413
SPTSPSYSPTSPSYSP+SP +YSP+SP S TSPD YSP+SP F SP SP
Sbjct: 1660 SPTSPSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSP 1719
Query: 412 SQPGYSPSSTSQYTPKT 362
+ PGYSP+S S ++P+T
Sbjct: 1720 TSPGYSPTSPS-FSPRT 1735
Score = 79.3 bits (194), Expect = 2e-13
Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 24/100 (24%)
Frame = -3
Query: 565 YSPTSPSY---SPTSPSYSPSSPTYSPSSP-------------YNSGTSPDYSPSSPQFS 434
+SPTSP SPTSP+YSP+SP+YSP+SP +NS TSP YSP+SP +S
Sbjct: 1615 FSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNSPTSPSYSPTSPSYS 1674
Query: 433 P--------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 338
P S YSP+ P +SP+S Y+P + PG
Sbjct: 1675 PASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPG 1714
Score = 78.2 bits (191), Expect = 4e-13
Identities = 39/70 (55%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPGY 398
YSPTSP SPTSPSYSP+SP+YSP+SP TSP YSP+SP +SP++ YSP+ P +
Sbjct: 1650 YSPTSPQQFNSPTSPSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSF 1709
Query: 397 SPSSTSQYTP 368
S Q +P
Sbjct: 1710 HRSPGQQMSP 1719
Score = 62.8 bits (151), Expect = 2e-08
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Frame = -3
Query: 565 YSPTSPS-YSPTSPSYSP-----SSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQP 404
YSPTSP+ YSPTSP SSP +SPSSP S TSP P SP S YSP+ P
Sbjct: 1581 YSPTSPAGYSPTSPLLDAGGRYASSPQFSPSSPSFSPTSPMLRPGSP---TSPNYSPTSP 1637
Query: 403 GYSPSS---TSQYTPKTNDNKDDP 341
YSP+S T Y+P + + P
Sbjct: 1638 SYSPASPAATRHYSPTSPQQFNSP 1661
Score = 58.9 bits (141), Expect = 3e-07
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 13/67 (19%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-SYSPSSPTY--------SPSSPYNSGTSPDYSPSSPQFSPSTG--- 422
YSP SP++SPTSP +YSP+SP++ SP+SP S TSP +SP +P PS G
Sbjct: 1687 YSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSPTSPGYSPTSPSFSPRTPGRGPSGGSGD 1746
Query: 421 -YSPSQP 404
YSP+ P
Sbjct: 1747 QYSPTSP 1753
[187][TOP]
>UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2AA31_PODAN
Length = 1748
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 10/77 (12%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSP-------SSPTYSPSSPYNSGTSPD-YSPSSPQF--SPSTGYSP 413
SPTSPSYSPTSPSYSP +SP+YSP+SP S TSPD YSP+SP F SP SP
Sbjct: 1662 SPTSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPGQQMSP 1721
Query: 412 SQPGYSPSSTSQYTPKT 362
+ PGYSP+S S ++P+T
Sbjct: 1722 TSPGYSPTSPS-FSPRT 1737
Score = 79.3 bits (194), Expect = 2e-13
Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 24/100 (24%)
Frame = -3
Query: 565 YSPTSPSY---SPTSPSYSPSSPTYSPSSP-------------YNSGTSPDYSPSSPQFS 434
+SPTSP SPTSPSYSP+SP+YSP+SP + S TSP YSP+SP +S
Sbjct: 1617 FSPTSPMLRPGSPTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQSPTSPSYSPTSPSYS 1676
Query: 433 P--------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 338
P S YSP+ P +SP+S Y+P + + PG
Sbjct: 1677 PASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPG 1716
Score = 61.6 bits (148), Expect = 4e-08
Identities = 41/76 (53%), Positives = 46/76 (60%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPS--YSPTSPSYSP-----SSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQ 407
YSPTSP+ YSPTSP SSP +SPSSP S TSP P SP SPS YSP+
Sbjct: 1582 YSPTSPAAGYSPTSPLIDAGGRFASSPQFSPSSPSFSPTSPMLRPGSPT-SPS--YSPTS 1638
Query: 406 PGYSPSS---TSQYTP 368
P YSP+S T Y+P
Sbjct: 1639 PSYSPASPAATRHYSP 1654
[188][TOP]
>UniRef100_A5DCV1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DCV1_PICGU
Length = 224
Score = 83.2 bits (204), Expect = 1e-14
Identities = 41/70 (58%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY----SPSQPGY 398
YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+ P+ Y
Sbjct: 135 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPNVAQLLTNFPTVLTY 194
Query: 397 SPSSTSQYTP 368
PS + TP
Sbjct: 195 FPSLLTHVTP 204
Score = 76.3 bits (186), Expect = 2e-12
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPS 389
SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP YSP+ P YSP+
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP------SYSPTSPSYSPN 180
[189][TOP]
>UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi
RepID=Q8MX30_NAEGR
Length = 1590
Score = 82.8 bits (203), Expect = 2e-14
Identities = 40/59 (67%), Positives = 48/59 (81%), Gaps = 2/59 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 395
YSP+SP +YSPTSP+YSPSSP YSP+SP S TSP+YSP+SP +SP S YSP+ P YS
Sbjct: 1532 YSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSPNYSPTSPAYS 1590
Score = 70.5 bits (171), Expect = 8e-11
Identities = 40/70 (57%), Positives = 48/70 (68%), Gaps = 5/70 (7%)
Frame = -3
Query: 562 SPTSPS----YSPTSP-SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGY 398
SPTSP YSP+SP +YSP+SP YSPSSP S TSP YSP+SP YSP+ P Y
Sbjct: 1522 SPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPN------YSPTSPAY 1575
Query: 397 SPSSTSQYTP 368
SP+S + Y+P
Sbjct: 1576 SPTSPN-YSP 1584
Score = 61.2 bits (147), Expect = 5e-08
Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPT----YSPSSPYN-SGTSPDYSPSSPQFSP-STGYSPSQPG 401
SP + ++SP + S P+SP YSPSSP N S TSP YSPSSP +SP S YSP+ P
Sbjct: 1510 SPYNSAFSPVASS--PTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPN 1567
Query: 400 YSPSSTSQYTP 368
YSP+S + Y+P
Sbjct: 1568 YSPTSPA-YSP 1577
[190][TOP]
>UniRef100_A7EKT1 DNA-directed RNA polymerase n=2 Tax=Sclerotinia sclerotiorum
RepID=A7EKT1_SCLS1
Length = 1746
Score = 82.8 bits (203), Expect = 2e-14
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 9/84 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQF-----SPSTGYSPSQ 407
YSPTSP+YSPTSP+ SP+SP+YSP+SP S TSP+YSP+SP + SP +G SP+
Sbjct: 1637 YSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTS 1696
Query: 406 PGYSPSST--SQYTPKTNDNKDDP 341
P YSP+S S +P+ N P
Sbjct: 1697 PVYSPTSPNWSPSSPQHQGNNTSP 1720
Score = 80.9 bits (198), Expect = 6e-14
Identities = 46/93 (49%), Positives = 57/93 (61%), Gaps = 23/93 (24%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPDYSPSSPQFSPST--- 425
SPTSPSYSPTSPSYSP+SP YSP+SP +G TSP YSP+SP +SPS+
Sbjct: 1654 SPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPNWSPSSPQH 1713
Query: 424 -------GYSPSQPGYSPSST--SQYTPKTNDN 353
YSP+ P YSP+S S +P+ +N
Sbjct: 1714 QGNNTSPKYSPTSPSYSPTSPNFSPTSPRGGNN 1746
Score = 72.0 bits (175), Expect = 3e-11
Identities = 44/111 (39%), Positives = 58/111 (52%), Gaps = 34/111 (30%)
Frame = -3
Query: 565 YSPTSPSYSPT---------------------SPSYSPSSPTYSPSSP-YNSGTSPDYSP 452
+SP+SP YSPT SP+++P+SP YSP+SP + S TSP YSP
Sbjct: 1580 FSPSSPGYSPTSPMMGGGASPGYSVSPRFSPVSPAFTPTSPAYSPTSPSFVSPTSPSYSP 1639
Query: 451 SSPQFSP----------STGYSPSQPGYSPSST--SQYTPKTNDNKDDPGT 335
+SP +SP S YSP+ P YSP+S S +P NK PG+
Sbjct: 1640 TSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGS 1690
[191][TOP]
>UniRef100_A6SI63 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6SI63_BOTFB
Length = 1742
Score = 82.8 bits (203), Expect = 2e-14
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 9/84 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQF-----SPSTGYSPSQ 407
YSPTSP+YSPTSP+ SP+SP+YSP+SP S TSP+YSP+SP + SP +G SP+
Sbjct: 1633 YSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTS 1692
Query: 406 PGYSPSST--SQYTPKTNDNKDDP 341
P YSP+S S +P+ N P
Sbjct: 1693 PVYSPTSPNWSPSSPQHQGNSTSP 1716
Score = 81.6 bits (200), Expect = 4e-14
Identities = 46/87 (52%), Positives = 56/87 (64%), Gaps = 16/87 (18%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY-----------SPSSPYNSGTSPDYSPSSPQF---SPS 428
YSPTSPSYSPTSP+YSP+SP Y SP+SP S TSP++SPSSPQ S S
Sbjct: 1656 YSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNSTS 1715
Query: 427 TGYSPSQPGYSPSST--SQYTPKTNDN 353
YSP+ P YSP+S S +P+ +N
Sbjct: 1716 PKYSPTSPSYSPTSPNFSPTSPRGGNN 1742
Score = 72.0 bits (175), Expect = 3e-11
Identities = 44/111 (39%), Positives = 58/111 (52%), Gaps = 34/111 (30%)
Frame = -3
Query: 565 YSPTSPSYSPT---------------------SPSYSPSSPTYSPSSP-YNSGTSPDYSP 452
+SP+SP YSPT SP+++P+SP YSP+SP + S TSP YSP
Sbjct: 1576 FSPSSPGYSPTSPMMGGGASPGYAVSPRFSPVSPAFTPTSPAYSPTSPSFVSPTSPSYSP 1635
Query: 451 SSPQFSP----------STGYSPSQPGYSPSST--SQYTPKTNDNKDDPGT 335
+SP +SP S YSP+ P YSP+S S +P NK PG+
Sbjct: 1636 TSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGS 1686
[192][TOP]
>UniRef100_UPI000151A8B4 hypothetical protein PGUG_01106 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B4
Length = 224
Score = 82.4 bits (202), Expect = 2e-14
Identities = 41/70 (58%), Positives = 48/70 (68%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY----SPSQPGY 398
YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP+ P+ Y
Sbjct: 135 YSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPNVAQLLTNFPTVLTY 194
Query: 397 SPSSTSQYTP 368
PS + TP
Sbjct: 195 FPSLLTHVTP 204
Score = 76.6 bits (187), Expect = 1e-12
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPS 389
SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP YSP+ P YSP+
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSP------SYSPTSPSYSPN 180
[193][TOP]
>UniRef100_Q0D054 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0D054_ASPTN
Length = 1742
Score = 82.4 bits (202), Expect = 2e-14
Identities = 41/76 (53%), Positives = 51/76 (67%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP------QFSP----STGYS 416
YSPTSP +SPTSP+YSP+SP SP+SP S TSP YSP+SP SP S Y+
Sbjct: 1637 YSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPSYSPTSPALGAGRNMSPTSPTSPKYT 1696
Query: 415 PSQPGYSPSSTSQYTP 368
P+ PG+SP+S Y+P
Sbjct: 1697 PTSPGWSPTSPQSYSP 1712
Score = 80.1 bits (196), Expect = 1e-13
Identities = 39/64 (60%), Positives = 50/64 (78%), Gaps = 4/64 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
+ PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP SP S +SP+ P Y
Sbjct: 1613 FGPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPSY 1672
Query: 397 SPSS 386
SP+S
Sbjct: 1673 SPTS 1676
Score = 75.1 bits (183), Expect = 3e-12
Identities = 38/70 (54%), Positives = 51/70 (72%), Gaps = 4/70 (5%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 398
+SP SP++ PTSP+YSP+SP Y SP+SP S TSP +SP+SP +SP S SP+ P +
Sbjct: 1606 FSPASPAFGPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVF 1665
Query: 397 SPSSTSQYTP 368
SP+S S Y+P
Sbjct: 1666 SPTSPS-YSP 1674
Score = 70.9 bits (172), Expect = 6e-11
Identities = 35/61 (57%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSP---YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
TSP +SP SP++ P+SP YSP+SP S TSP YSP+SP FSP S YSP+ P SP+
Sbjct: 1602 TSPGFSPASPAFGPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPA 1661
Query: 388 S 386
S
Sbjct: 1662 S 1662
Score = 69.7 bits (169), Expect = 1e-10
Identities = 40/78 (51%), Positives = 48/78 (61%), Gaps = 15/78 (19%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY---------SPSSPTYSPSSPYNSGTSPD-YSPSSPQF-----SP 431
+SPTSPSYSPTSP+ SP+SP Y+P+SP S TSP YSP+SP SP
Sbjct: 1665 FSPTSPSYSPTSPALGAGRNMSPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNIGGSPTSP 1724
Query: 430 STGYSPSQPGYSPSSTSQ 377
YSP+ P YSP+S Q
Sbjct: 1725 GGAYSPTSPTYSPTSPRQ 1742
Score = 63.9 bits (154), Expect = 8e-09
Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSY---SP--TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPG 401
YSPTSP SP TSP +SP+SP + P+SP S TSP Y +SP SPS YSP+ PG
Sbjct: 1587 YSPTSPGMGITSPRMTSPGFSPASPAFGPTSPAYSPTSPAYGQASPT-SPS--YSPTSPG 1643
Query: 400 YSPSSTSQYTP 368
+SP+S + Y+P
Sbjct: 1644 FSPTSPN-YSP 1653
[194][TOP]
>UniRef100_B6QAY2 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QAY2_PENMQ
Length = 1744
Score = 82.4 bits (202), Expect = 2e-14
Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 23/98 (23%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST------------- 425
YSPTSPS+ TSPSYSP+SP +SPSSP S +SP++SP+SP FSPS+
Sbjct: 1621 YSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSPASPAFSPSSPTYSPTSPAIGGR 1680
Query: 424 ----------GYSPSQPGYSPSSTSQYTPKTNDNKDDP 341
YSP+ PG+SP+S Y+P + + P
Sbjct: 1681 QFSPSSPSSPKYSPASPGWSPTSPEIYSPTSPNIHGSP 1718
Score = 81.6 bits (200), Expect = 4e-14
Identities = 40/73 (54%), Positives = 55/73 (75%), Gaps = 5/73 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
++ TSP+YSPTSPS+ +SP+YSP+SP S +SP+YSPSSP FSP S +SPS P YSP+
Sbjct: 1614 FAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSPASPAFSPSSPTYSPT 1673
Query: 388 STS----QYTPKT 362
S + Q++P +
Sbjct: 1674 SPAIGGRQFSPSS 1686
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
+ TSP +SP SP+++ +SP YSP+SP TSP YSP+SP+FSPS+ YSPS P +SP+
Sbjct: 1600 FMSTSPGFSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSPA 1659
Query: 388 S 386
S
Sbjct: 1660 S 1660
Score = 68.6 bits (166), Expect = 3e-10
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPSTGYSPSQPGYSPS 389
YSP+SP+ S TSP + +SP +SP SP + TSP YSP+SP F + S YSP+ P +SPS
Sbjct: 1586 YSPSSPNMSVTSPRFMSTSPGFSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPS 1645
Query: 388 STSQYTPKT 362
S + Y+P +
Sbjct: 1646 SPN-YSPSS 1653
Score = 63.2 bits (152), Expect = 1e-08
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-PSTGYSPSQPGYSPSS 386
SP SP YSP+S SYSPSSP S +SP TSP +SP SP F+ S YSP+ P + +S
Sbjct: 1574 SPVSPGYSPSS-SYSPSSPNMSVTSPRFMSTSPGFSPQSPAFAITSPAYSPTSPSFQATS 1632
Query: 385 TSQYTP 368
S Y+P
Sbjct: 1633 PS-YSP 1637
Score = 61.2 bits (147), Expect = 5e-08
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 3/50 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS-YSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSPST 425
YSP SP +SPTSP YSP+SP SP+SP TSP YSP+SPQ++P++
Sbjct: 1692 YSPASPGWSPTSPEIYSPTSPNIHGSPTSPARGATSPSYSPTSPQYNPTS 1741
Score = 60.8 bits (146), Expect = 7e-08
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 19/82 (23%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS-----YSPSSPTY---SPSSPYNSGTSPD-YSPSSPQF-----SPS 428
+SP+SP+YSPTSP+ +SPSSP+ SP+SP S TSP+ YSP+SP SP+
Sbjct: 1663 FSPSSPTYSPTSPAIGGRQFSPSSPSSPKYSPASPGWSPTSPEIYSPTSPNIHGSPTSPA 1722
Query: 427 TG-----YSPSQPGYSPSSTSQ 377
G YSP+ P Y+P+S Q
Sbjct: 1723 RGATSPSYSPTSPQYNPTSPRQ 1744
[195][TOP]
>UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W4S0_PYRTR
Length = 1742
Score = 82.0 bits (201), Expect = 3e-14
Identities = 45/71 (63%), Positives = 53/71 (74%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSY-SPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQF---SPSTGYSPSQPG 401
YSPTSP Y SPTSPSYSP+SP YSP+SP S TSP+YSP+SP F + S YSP+ P
Sbjct: 1612 YSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQ 1671
Query: 400 YSPSSTSQYTP 368
YSP+S QY+P
Sbjct: 1672 YSPTS-PQYSP 1681
Score = 79.0 bits (193), Expect = 2e-13
Identities = 44/80 (55%), Positives = 51/80 (63%), Gaps = 20/80 (25%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT---------YSPSSPYNSGTSPDYSPSSPQF-------S 434
YSPTSP YSPTSP+YSP+SPT YSP+SP S TSP YSP+SPQ+ S
Sbjct: 1635 YSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTSPQYQATSDRRS 1694
Query: 433 P----STGYSPSQPGYSPSS 386
P S YSP+ P YSP+S
Sbjct: 1695 PTSPTSPQYSPTSPRYSPTS 1714
Score = 77.0 bits (188), Expect = 9e-13
Identities = 45/78 (57%), Positives = 50/78 (64%), Gaps = 15/78 (19%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTY----------SPSSPYNSGTSPDYSPSSP--QFSP-ST 425
YSPTSP YSPTSP YSP+SP Y SP+SP S TSP YSP+SP FSP S
Sbjct: 1665 YSPTSPQYSPTSPQYSPTSPQYQATSDRRSPTSPTSPQYSPTSPRYSPTSPAGSFSPTSP 1724
Query: 424 GYSPSQPG--YSPSSTSQ 377
YSP+ PG YSP+S Q
Sbjct: 1725 RYSPTSPGPAYSPTSPKQ 1742
Score = 75.1 bits (183), Expect = 3e-12
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 14/77 (18%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPY----------NSGTSPDYSPSSPQFSPST---GYS 416
TSP+YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP++ +S
Sbjct: 1661 TSPAYSPTSPQYSPTSPQYSPTSPQYQATSDRRSPTSPTSPQYSPTSPRYSPTSPAGSFS 1720
Query: 415 PSQPGYSPSSTS-QYTP 368
P+ P YSP+S Y+P
Sbjct: 1721 PTSPRYSPTSPGPAYSP 1737
Score = 70.5 bits (171), Expect = 8e-11
Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 15/81 (18%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS--------------YSPSSPTYSPSSP-YNSGTSPDYSPSSPQFSP 431
+SPTSP YSPTSP SP+SP YSP+SP Y S TSP YSP+SP
Sbjct: 1577 FSPTSPGYSPTSPGTASPRFAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSPTSP---- 1632
Query: 430 STGYSPSQPGYSPSSTSQYTP 368
GYSP+ P YSP+S + Y+P
Sbjct: 1633 -AGYSPTSPQYSPTSPN-YSP 1651
[196][TOP]
>UniRef100_C6F0A3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A3_PLAFA
Length = 195
Score = 81.3 bits (199), Expect = 5e-14
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP++ + + P YSP
Sbjct: 47 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSP 106
Query: 391 SS 386
S
Sbjct: 107 YS 108
Score = 80.9 bits (198), Expect = 6e-14
Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P
Sbjct: 40 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNI 99
Query: 388 STSQYTP 368
++ Y+P
Sbjct: 100 ASPNYSP 106
Score = 78.6 bits (192), Expect = 3e-13
Identities = 38/61 (62%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+ SP YS TSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+
Sbjct: 33 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 92
Query: 388 S 386
S
Sbjct: 93 S 93
Score = 60.8 bits (146), Expect = 7e-08
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 19/78 (24%)
Frame = -3
Query: 544 YSPTSPSYSPSSPTYSPSSPYN------------------SGTSPDYSPSSPQFSP-STG 422
YSPTSP+Y+ ++ YSP+SP N S TSP YSP+SP++SP S
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S +Y+P
Sbjct: 61 YSPTSPKYSPTS-PKYSP 77
Score = 60.8 bits (146), Expect = 7e-08
Identities = 37/84 (44%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSPDYSPSSPQFSPS--- 428
YSPTSP YSPTSP YSP+SP YS +SP S TSP YS SSP + S
Sbjct: 75 YSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKSGVV 134
Query: 427 TGYSPSQPGYSPSSTSQYTPKTND 356
+ P P Y S Q D
Sbjct: 135 NAHQPMSPAYILQSPVQIKQNVQD 158
[197][TOP]
>UniRef100_B0DB45 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DB45_LACBS
Length = 1742
Score = 80.9 bits (198), Expect = 6e-14
Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
YSPTSP+ + TSP YSP+SP YSP+SP S TSP YSP SP FSP S YSP+ P +SP+
Sbjct: 1602 YSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPA 1661
Query: 388 S 386
S
Sbjct: 1662 S 1662
Score = 68.2 bits (165), Expect = 4e-10
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 23/85 (27%)
Frame = -3
Query: 565 YSPTSPSYSPTSP----------------------SYSPSSPTYSPSSPYNSGTSPDYSP 452
YSPTSPS+ P SP + +P+SPTYSP+SP + TSP YSP
Sbjct: 1559 YSPTSPSFVPQSPFGGATSPFGTSPYAASPYYDPSARNPTSPTYSPTSPALNLTSPGYSP 1618
Query: 451 SSPQFSP-STGYSPSQPGYSPSSTS 380
+SP++SP S +SP+ P YSP S S
Sbjct: 1619 TSPRYSPTSPSFSPTSPRYSPQSPS 1643
Score = 67.8 bits (164), Expect = 5e-10
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 440
YSPTSPS+SPTSP YSP SP++SP+SP S TSP +SP+SP+
Sbjct: 1623 YSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASPR 1664
Score = 66.2 bits (160), Expect = 2e-09
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 8/70 (11%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-------YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 410
Y P++ + PTSP+YSP+SP YSP+SP S TSP +SP+SP++SP S +SP+
Sbjct: 1590 YDPSARN--PTSPTYSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPT 1647
Query: 409 QPGYSPSSTS 380
P YSP+S S
Sbjct: 1648 SPRYSPTSPS 1657
[198][TOP]
>UniRef100_UPI000023F34A hypothetical protein FG00916.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F34A
Length = 1758
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/113 (39%), Positives = 61/113 (53%), Gaps = 35/113 (30%)
Frame = -3
Query: 565 YSPTSPSYSPTSP----------SYSPSSPTYSPSSP-------------YNSGTSPDYS 455
+SP+SPS+SPTSP SYSP+SP+YSP+SP +NS TSP YS
Sbjct: 1609 FSPSSPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPTSPSYS 1668
Query: 454 PSSPQFSP------------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTK 332
P+SP +SP S YSP+ P +SP+S Y+P + + P T+
Sbjct: 1669 PASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTTQ 1721
Score = 77.8 bits (190), Expect = 5e-13
Identities = 41/74 (55%), Positives = 52/74 (70%), Gaps = 8/74 (10%)
Frame = -3
Query: 565 YSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSG----TSPDYSPSSPQFSPST--GYSPS 410
YSPTSP+ SPTSPSYSP+SP YSP+SP G TSP YSP+SP +SP++ YSP+
Sbjct: 1651 YSPTSPAQFNSPTSPSYSPASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPT 1710
Query: 409 QPGYSPSSTSQYTP 368
P + S T+Q +P
Sbjct: 1711 SPTFQRSPTTQQSP 1724
Score = 76.6 bits (187), Expect = 1e-12
Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 14/90 (15%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP-----------TYSPSSPYNSGTSPD-YSPSSPQF--SPST 425
SPTSPSYSP SP+YSP+SP +YSP+SP S TSP+ YSP+SP F SP+T
Sbjct: 1661 SPTSPSYSPASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTT 1720
Query: 424 GYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 335
SP+ P YSP+S + ++P+T PGT
Sbjct: 1721 QQSPTSPSYSPTSPA-FSPRT----PGPGT 1745
Score = 67.0 bits (162), Expect = 9e-10
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 18/87 (20%)
Frame = -3
Query: 565 YSPTSPS--YSPTSP--------SYSPSSPTYSPSSPYNSGTSP---DYSPSSPQFSP-S 428
YSPTSP+ YSPTSP Y P+SP++SPSSP S TSP SP+SP +SP S
Sbjct: 1578 YSPTSPNMGYSPTSPLIDGGGMGRYGPTSPSFSPSSPSFSPTSPMLRPTSPASPSYSPTS 1637
Query: 427 TGYSPSQPG----YSPSSTSQYTPKTN 359
YSP+ P YSP+S +Q+ T+
Sbjct: 1638 PSYSPTSPSSPRHYSPTSPAQFNSPTS 1664
Score = 54.3 bits (129), Expect = 6e-06
Identities = 41/99 (41%), Positives = 51/99 (51%), Gaps = 25/99 (25%)
Frame = -3
Query: 562 SPTSPSYSPTSP-SYSPSSPT--YSPSSPY-NSGTSPDYSPSSPQFSPST---------- 425
SP S S SPTSP SYSP+SP YSP+SP + G Y P+SP FSPS+
Sbjct: 1565 SPFS-STSPTSPFSYSPTSPNMGYSPTSPLIDGGGMGRYGPTSPSFSPSSPSFSPTSPML 1623
Query: 424 --------GYSPSQPGYSPSSTS---QYTPKTNDNKDDP 341
YSP+ P YSP+S S Y+P + + P
Sbjct: 1624 RPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSP 1662
[199][TOP]
>UniRef100_B8M2Y2 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8M2Y2_TALSN
Length = 1755
Score = 78.6 bits (192), Expect = 3e-13
Identities = 41/90 (45%), Positives = 52/90 (57%), Gaps = 15/90 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP--------------- 431
Y SPSYSPTSP +SPSSP YSPSSP S +SP +SP+SP +SP
Sbjct: 1627 YQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPT 1686
Query: 430 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 341
S YSP+ P +SP+S Y+P + + P
Sbjct: 1687 SPKYSPASPAWSPTSPEIYSPTSPNIHGSP 1716
Score = 73.9 bits (180), Expect = 8e-12
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 13/82 (15%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--------GYSPS 410
+SP+SP++ TSP+YSP+SP+Y +SP S TSP +SPSSP +SPS+ +SP+
Sbjct: 1606 FSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPT 1665
Query: 409 QPGYSPSS-----TSQYTPKTN 359
P YSP+S T Q++ T+
Sbjct: 1666 SPTYSPTSPAIGGTRQFSSPTS 1687
Score = 70.1 bits (170), Expect = 1e-10
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPSS 386
TSP +SP+SP++ +SP YSP+SP SP YSP+SP+FSPS+ YSPS P S SS
Sbjct: 1602 TSPGFSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSS 1659
Score = 64.3 bits (155), Expect = 6e-09
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 24/90 (26%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-------YNSGTSPDYSPSSPQFSPSTGY---- 419
YSP+SP+ S +SP++SP+SPTYSP+SP ++S TSP YSP+SP +SP++
Sbjct: 1648 YSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSPTSPEIYSP 1707
Query: 418 -------SPSQP---GYSPS---STSQYTP 368
SP+ P G SPS ++ QY P
Sbjct: 1708 TSPNIHGSPTSPARGGTSPSYSPTSPQYNP 1737
Score = 63.9 bits (154), Expect = 8e-09
Identities = 37/74 (50%), Positives = 44/74 (59%), Gaps = 14/74 (18%)
Frame = -3
Query: 565 YSPTSPSYSP-------------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 428
YSP+S SYSP TSP +SPSSP + +SP S TSP Y +SP +SP S
Sbjct: 1580 YSPSS-SYSPASPGMSITSPRFVTSPGFSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTS 1638
Query: 427 TGYSPSQPGYSPSS 386
+SPS P YSPSS
Sbjct: 1639 PRFSPSSPNYSPSS 1652
Score = 60.5 bits (145), Expect = 9e-08
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 23/85 (27%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-------YSP----SSP----------YNSGTSPDYSPS 449
YSPTSP +SP+SP+YSPSSP +SP SP ++S TSP YSP+
Sbjct: 1634 YSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPA 1693
Query: 448 SPQFSPSTG--YSPSQPGYSPSSTS 380
SP +SP++ YSP+ P S TS
Sbjct: 1694 SPAWSPTSPEIYSPTSPNIHGSPTS 1718
Score = 60.1 bits (144), Expect = 1e-07
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 24/83 (28%)
Frame = -3
Query: 565 YSPTSPSY-------SPTSPSYSPSSPTY-----------------SPSSPYNSGTSPDY 458
YSPTSP+ SPTSP YSP+SP + SP+SP GTSP Y
Sbjct: 1669 YSPTSPAIGGTRQFSSPTSPKYSPASPAWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSY 1728
Query: 457 SPSSPQFSPSTGYSPSQPGYSPS 389
SP+SPQ++P+ Y + PG P+
Sbjct: 1729 SPTSPQYNPT--YVYTNPGEVPA 1749
Score = 59.3 bits (142), Expect = 2e-07
Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Frame = -3
Query: 565 YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSP 392
YSPTSP + SP SP YSPSS +YSP+SP S TSP + +SP FSPS+ + + P YSP
Sbjct: 1565 YSPTSPFNTSPVSPGYSPSS-SYSPASPGMSITSPRFV-TSPGFSPSSPNFQTTSPAYSP 1622
Query: 391 SSTS 380
+S S
Sbjct: 1623 TSPS 1626
[200][TOP]
>UniRef100_C7YI77 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YI77_NECH7
Length = 1750
Score = 78.2 bits (191), Expect = 4e-13
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 34/112 (30%)
Frame = -3
Query: 565 YSPTSPSYSPTSP----------SYSPSSPTYSPSSP-------------YNSGTSPDYS 455
+SP+SPS+SPTSP +YSPSSP YSP+SP +NS TSP+YS
Sbjct: 1603 FSPSSPSFSPTSPMVRPTSPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSPNYS 1662
Query: 454 PSSPQFSP-----------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTK 332
P+SP +SP S YSP+ P +SP+S Y+P T+ + PG +
Sbjct: 1663 PASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSP-TSPYQRSPGAQ 1713
Score = 68.9 bits (167), Expect = 2e-10
Identities = 41/91 (45%), Positives = 51/91 (56%), Gaps = 19/91 (20%)
Frame = -3
Query: 565 YSPTSPSYSP----------TSPSYSPSSPT--------YSPSSPYNSGTSPDYSPSSPQ 440
YSP SP+YSP TSPSYSP+SPT YSP+SPY SP+SP
Sbjct: 1661 YSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSPTSPYQRSPGAQQSPTSPS 1720
Query: 439 FSP-STGYSPSQPGYSPSSTSQYTPKTNDNK 350
+SP S +SP PG SS +QY+P + N+
Sbjct: 1721 YSPTSPAFSPRTPG-PGSSGNQYSPNSPSNE 1750
Score = 67.4 bits (163), Expect = 7e-10
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 21/89 (23%)
Frame = -3
Query: 565 YSPTSPSY--SPTSPSYSPSSPTYSPSSP--YNSGT--------SPDYSPSSPQ-FSPST 425
YSPTSP+ SPTSP+YSP+SP YSP+SP + GT SP +SP+SP+ +SP++
Sbjct: 1645 YSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSPTS 1704
Query: 424 GY--------SPSQPGYSPSSTSQYTPKT 362
Y SP+ P YSP+S + ++P+T
Sbjct: 1705 PYQRSPGAQQSPTSPSYSPTSPA-FSPRT 1732
Score = 64.7 bits (156), Expect = 5e-09
Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 20/91 (21%)
Frame = -3
Query: 565 YSPTSPS-YSPTSP--------------SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 431
YSPTSP+ YSPTSP S+SPSSP++SP+SP TSP +SP +SP
Sbjct: 1574 YSPTSPNAYSPTSPLVDGGMGGRYATSPSFSPSSPSFSPTSPMVRPTSP----ASPNYSP 1629
Query: 430 ST-GYSPSQPG----YSPSSTSQYTPKTNDN 353
S+ YSP+ P YSP+S +Q+ T+ N
Sbjct: 1630 SSPNYSPASPSSPRHYSPTSPAQFNSPTSPN 1660
[201][TOP]
>UniRef100_C6F0B0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0B0_PLAFA
Length = 188
Score = 77.8 bits (190), Expect = 5e-13
Identities = 37/62 (59%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP++ + + P YSP
Sbjct: 40 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSP 99
Query: 391 SS 386
S
Sbjct: 100 YS 101
Score = 73.2 bits (178), Expect = 1e-11
Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
Y+ SP YS TSP YSP+SP YSP+SP S TSP YSP+SP++SP S YSP+ P
Sbjct: 33 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNI 92
Query: 388 STSQYTP 368
++ Y+P
Sbjct: 93 ASPNYSP 99
Score = 68.6 bits (166), Expect = 3e-10
Identities = 41/86 (47%), Positives = 49/86 (56%), Gaps = 26/86 (30%)
Frame = -3
Query: 565 YSPTSPS-------YSPTSPS------------------YSPSSPTYSPSSPYNSGTSPD 461
YSPTSP+ YSPTSP YS +SP YSP+SP S TSP
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 460 YSPSSPQFSP-STGYSPSQPGYSPSS 386
YSP+SP++SP S YSP+ P YSP+S
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTS 86
Score = 60.8 bits (146), Expect = 7e-08
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 19/78 (24%)
Frame = -3
Query: 544 YSPTSPSYSPSSPTYSPSSPYN------------------SGTSPDYSPSSPQFSP-STG 422
YSPTSP+Y+ ++ YSP+SP N S TSP YSP+SP++SP S
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 421 YSPSQPGYSPSSTSQYTP 368
YSP+ P YSP+S +Y+P
Sbjct: 61 YSPTSPKYSPTS-PKYSP 77
Score = 60.8 bits (146), Expect = 7e-08
Identities = 37/84 (44%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSPDYSPSSPQFSPS--- 428
YSPTSP YSPTSP YSP+SP YS +SP S TSP YS SSP + S
Sbjct: 68 YSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKSGVV 127
Query: 427 TGYSPSQPGYSPSSTSQYTPKTND 356
+ P P Y S Q D
Sbjct: 128 NAHQPMSPAYILQSPVQIKQNVQD 151
[202][TOP]
>UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SR21_9PEZI
Length = 1756
Score = 75.1 bits (183), Expect = 3e-12
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 27/102 (26%)
Frame = -3
Query: 565 YSPTSPSYSPTSP----------SYSPSSPTYSPSSP-------------YNSGTSPDYS 455
+SP+SPS+SPTSP +YSP+SP+YSP+SP +NS TSP YS
Sbjct: 1607 FSPSSPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYS 1666
Query: 454 PSSPQFSPST----GYSPSQPGYSPSSTSQYTPKTNDNKDDP 341
P+SP +SP++ G P+ P YSP+S S ++P + ++ P
Sbjct: 1667 PASPSYSPTSPNLHGAGPTSPSYSPASPS-WSPTSPEHSYSP 1707
Score = 73.9 bits (180), Expect = 8e-12
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 8/83 (9%)
Frame = -3
Query: 565 YSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQFSPST---GYSPS 410
YSPTSP+ SPTSPSYSP+SP+YSP+SP G TSP YSP+SP +SP++ YSP+
Sbjct: 1649 YSPTSPAQFNSPTSPSYSPASPSYSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHSYSPT 1708
Query: 409 QPGYSPSSTSQYTPKTNDNKDDP 341
P + + Q N + P
Sbjct: 1709 SPSFQRPAMQQSPTSPNYSPTSP 1731
Score = 70.9 bits (172), Expect = 6e-11
Identities = 40/79 (50%), Positives = 52/79 (65%), Gaps = 11/79 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSP----------SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-PSTGY 419
YSP SPSYSPTSP SYSP+SP++SP+SP +S YSP+SP F P+
Sbjct: 1665 YSPASPSYSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHS-----YSPTSPSFQRPAMQQ 1719
Query: 418 SPSQPGYSPSSTSQYTPKT 362
SP+ P YSP+S S ++P+T
Sbjct: 1720 SPTSPNYSPTSPS-FSPRT 1737
Score = 67.4 bits (163), Expect = 7e-10
Identities = 32/66 (48%), Positives = 47/66 (71%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQ 377
TSP +SP+SPS+SP+SP + P+SP SP+YSP+SP +SP++ SP YSP+S +Q
Sbjct: 1603 TSPQFSPSSPSFSPTSPVHRPTSP----ASPNYSPTSPSYSPTSPTSPRH--YSPTSPAQ 1656
Query: 376 YTPKTN 359
+ T+
Sbjct: 1657 FNSPTS 1662
[203][TOP]
>UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma
polyspora DSM 70294 RepID=A7TTU2_VANPO
Length = 1311
Score = 72.4 bits (176), Expect = 2e-11
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQP 404
+SPTSP+YSPTSPSYSP+SP+YSP+S S TS YSP+SP +S + ++P P
Sbjct: 1225 FSPTSPAYSPTSPSYSPTSPSYSPTSTSYSQTSSSYSPTSPSYSQNLHHTPKIP 1278
Score = 63.2 bits (152), Expect = 1e-08
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTS 380
+SP +SPTSP+YSP+SP+YSP TSP YSP+S +S S+ YSP+ P Y S
Sbjct: 1221 SSPGFSPTSPAYSPTSPSYSP-------TSPSYSPTSTSYSQTSSSYSPTSPSY--SQNL 1271
Query: 379 QYTPK 365
+TPK
Sbjct: 1272 HHTPK 1276
[204][TOP]
>UniRef100_Q9FI54 Genomic DNA, chromosome 5, TAC clone:K3K7 n=1 Tax=Arabidopsis
thaliana RepID=Q9FI54_ARATH
Length = 314
Score = 72.0 bits (175), Expect = 3e-11
Identities = 44/101 (43%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSY-------SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQ 407
YSPTSPSYSPTSPSY SP S +YSP SP +S SP YSP+S SP P
Sbjct: 113 YSPTSPSYSPTSPSYRPNSSSDSPDSHSYSPVSPDHSLVSPQYSPTSTHHSPILSSPPED 172
Query: 406 PGYSPSSTSQYTPKTNDNKDDPGTK*ARLICLRDGSDCADG 284
GY P KT+ K+ + DGS DG
Sbjct: 173 YGYGPDDIEAGKMKTDQLKE-----------IGDGSSHVDG 202
[205][TOP]
>UniRef100_A8N128 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
RepID=A8N128_COPC7
Length = 1642
Score = 70.1 bits (170), Expect = 1e-10
Identities = 35/59 (59%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPT-YSPSSP-YNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
TSP+YSPTSP +SP+SP YSP SP + S SP+YSP+SP +SP+ P+ P YSPSS
Sbjct: 1557 TSPAYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSPASPSYSPA----PASPNYSPSS 1611
Score = 65.9 bits (159), Expect = 2e-09
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 15/83 (18%)
Frame = -3
Query: 565 YSPTSPS-YSPTSPSYSPSSPTYSPSSPYNS-------------GTSPDYSPSSPQFS-P 431
YSP+SP+ YSPTSP P SP +P+SP+++ TSP YSP+SP
Sbjct: 1498 YSPSSPNAYSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRRQATSPTYSPTSPIAGLT 1557
Query: 430 STGYSPSQPGYSPSSTSQYTPKT 362
S YSP+ PG+SP+S + Y+P++
Sbjct: 1558 SPAYSPTSPGFSPTSPNGYSPQS 1580
Score = 65.1 bits (157), Expect = 4e-09
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 22/99 (22%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSP--------------------TYSPSSPYNSGTSPDYSPSS 446
YSPTSP P SP +P+SP TYSP+SP TSP YSP+S
Sbjct: 1506 YSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRRQATSPTYSPTSPIAGLTSPAYSPTS 1565
Query: 445 PQFSPST--GYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 335
P FSP++ GYSP P + ++ Y+P + P +
Sbjct: 1566 PGFSPTSPNGYSPQSPNFGSPASPNYSPASPSYSPAPAS 1604
Score = 56.6 bits (135), Expect = 1e-06
Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPS--SPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPS 410
SP SP+YSP SPSYSP+ SP YSPSSP S TSP + + P + S+ Y S
Sbjct: 1585 SPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSPAHDQNGPTNNRSSAYQQS 1637
Score = 53.9 bits (128), Expect = 8e-06
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSY-SPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYS 395
YSP SP++ SP SP+YSP+SP+YSP+ SP S +SP +SP+SP + + P +
Sbjct: 1576 YSPQSPNFGSPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSP------AHDQNGPTNN 1629
Query: 394 PSSTSQYTP 368
SS Q +P
Sbjct: 1630 RSSAYQQSP 1638
[206][TOP]
>UniRef100_UPI0000F3065A UPI0000F3065A related cluster n=1 Tax=Bos taurus
RepID=UPI0000F3065A
Length = 540
Score = 66.6 bits (161), Expect = 1e-09
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+ P SP + SP + P SP ++P SP + SPD+ P SP++ P S GY P PGY P
Sbjct: 79 FEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSPRYEPQSPGYEPKSPGYEPR 138
Query: 388 STSQYTPKTNDNKDDPGTK 332
S T +P K
Sbjct: 139 SPGYGTQSPEYEPQNPEFK 157
Score = 57.8 bits (138), Expect = 6e-07
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 15/81 (18%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 425
P SP + P SP + P SP + P SP SP + P SP+F+P S
Sbjct: 60 PQSPGFGPQSPEFEPQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSP 119
Query: 424 GYSPSQPGYSPSSTSQYTPKT 362
Y P PGY P S Y P++
Sbjct: 120 RYEPQSPGYEPKSPG-YEPRS 139
[207][TOP]
>UniRef100_UPI00004C0623 PREDICTED: similar to zinc finger protein 239 (predicted) isoform 1
n=1 Tax=Canis lupus familiaris RepID=UPI00004C0623
Length = 554
Score = 65.9 bits (159), Expect = 2e-09
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+ P SP + SP + P SP ++P SP + SP++ P SP++ P S GY P PGY P
Sbjct: 79 FEPESPGFESRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEPK 138
Query: 388 STSQYTPKT 362
S Y PK+
Sbjct: 139 SPG-YEPKS 146
Score = 59.7 bits (143), Expect = 1e-07
Identities = 27/57 (47%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 386
SP + P SP Y P SP Y P SP SP Y P SP + P S GY PGY P +
Sbjct: 111 SPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSPGYEPQN 167
Score = 59.3 bits (142), Expect = 2e-07
Identities = 28/61 (45%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPSTGYSPSQPGYSPS 389
+ P SP Y P SP Y P SP Y P SP SP Y P SP + S S GY P P +
Sbjct: 114 FEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSPGYEPQNPEFKTQ 173
Query: 388 S 386
S
Sbjct: 174 S 174
[208][TOP]
>UniRef100_A9SW33 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SW33_PHYPA
Length = 284
Score = 65.9 bits (159), Expect = 2e-09
Identities = 37/66 (56%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS-------SPQFSPSTGY-SPSQ 407
SP SP+YSP+ SP SPTYSPS Y S SP YSPS SP +SPS Y SP
Sbjct: 169 SPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPS 228
Query: 406 PGYSPS 389
P YSPS
Sbjct: 229 PSYSPS 234
Score = 61.2 bits (147), Expect = 5e-08
Identities = 36/70 (51%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS-------SPQFSPSTGY-SPSQPGY 398
SP YSP+ SP SPTYSPS Y S SP YSPS SP +SPS Y SP P Y
Sbjct: 158 SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTY 217
Query: 397 SPSSTSQYTP 368
SPS + P
Sbjct: 218 SPSPVYKSPP 227
Score = 53.9 bits (128), Expect = 8e-06
Identities = 34/70 (48%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS-------SPQFSPSTGY-SPSQPGY 398
SP Y+ SP Y SP YSPS Y S SP YSPS SP +SPS Y SP P Y
Sbjct: 146 SPPYASPSPVYE--SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTY 203
Query: 397 SPSSTSQYTP 368
SPS + P
Sbjct: 204 SPSPVYKSPP 213
[209][TOP]
>UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii
RepID=B9PMD7_TOXGO
Length = 1892
Score = 65.5 bits (158), Expect = 3e-09
Identities = 33/65 (50%), Positives = 40/65 (61%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSST 383
SP SP+YSPTSP YSP+SP YSP+ S SP Y SPS ++ P YSPSS
Sbjct: 1756 SPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPS--FTVQSPRYSPSSP 1813
Query: 382 SQYTP 368
+ Y+P
Sbjct: 1814 AAYSP 1818
Score = 65.1 bits (157), Expect = 4e-09
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSG---TSPDYSPSSPQFSPST--GYSPSQP 404
YSPTSP YSPTSP YSP+ YSP SP Y +G SP ++ SP++SPS+ YSP+ P
Sbjct: 1762 YSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSPSSPAAYSPTSP 1821
Query: 403 ----GYSPSSTSQYTP 368
SPS + P
Sbjct: 1822 MPNVAGSPSYEDSHAP 1837
Score = 62.4 bits (150), Expect = 2e-08
Identities = 39/87 (44%), Positives = 47/87 (54%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSP----SYSPTSP-SYSPSSPTYSPSSPYN----------------SGTSPDYSPS 449
YSPTSP SYSP+SP SYSP+SP YSP+S + S SP +P
Sbjct: 1671 YSPTSPTLSPSYSPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPM 1730
Query: 448 SPQFSPSTGYSPSQPGYSPSSTSQYTP 368
SP FS ST YSP+ P + TS +P
Sbjct: 1731 SPHFSASTSYSPTSPVQQSNPTSPTSP 1757
Score = 58.9 bits (141), Expect = 3e-07
Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 25/92 (27%)
Frame = -3
Query: 562 SPTSPSYSPTSP------SYSPSSPTY-----SPSSPYN---SGTSPDYSPSSPQFSPS- 428
SP SPS +P SP SYSP+SP SP+SPY+ S TSP YSP+SP +SP+
Sbjct: 1721 SPFSPSNNPMSPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSPTF 1780
Query: 427 TGYSPSQPGY-------SPSSTSQ---YTPKT 362
YSP P Y SPS T Q Y+P +
Sbjct: 1781 APYSPQSPSYGAGQGPLSPSFTVQSPRYSPSS 1812
[210][TOP]
>UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KEC6_TOXGO
Length = 1892
Score = 65.5 bits (158), Expect = 3e-09
Identities = 33/65 (50%), Positives = 40/65 (61%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSST 383
SP SP+YSPTSP YSP+SP YSP+ S SP Y SPS ++ P YSPSS
Sbjct: 1756 SPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPS--FTVQSPRYSPSSP 1813
Query: 382 SQYTP 368
+ Y+P
Sbjct: 1814 AAYSP 1818
Score = 65.1 bits (157), Expect = 4e-09
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSG---TSPDYSPSSPQFSPST--GYSPSQP 404
YSPTSP YSPTSP YSP+ YSP SP Y +G SP ++ SP++SPS+ YSP+ P
Sbjct: 1762 YSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSPSSPAAYSPTSP 1821
Query: 403 ----GYSPSSTSQYTP 368
SPS + P
Sbjct: 1822 MPNVAGSPSYEDSHAP 1837
Score = 61.2 bits (147), Expect = 5e-08
Identities = 38/87 (43%), Positives = 47/87 (54%), Gaps = 21/87 (24%)
Frame = -3
Query: 565 YSPTSP----SYSPTSP-SYSPSSPTYSPSSPYN----------------SGTSPDYSPS 449
YSPTSP SYSP++P SYSP+SP YSP+S + S SP +P
Sbjct: 1671 YSPTSPTLSPSYSPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPM 1730
Query: 448 SPQFSPSTGYSPSQPGYSPSSTSQYTP 368
SP FS ST YSP+ P + TS +P
Sbjct: 1731 SPHFSASTSYSPTSPVQQSNPTSPTSP 1757
Score = 58.9 bits (141), Expect = 3e-07
Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 25/92 (27%)
Frame = -3
Query: 562 SPTSPSYSPTSP------SYSPSSPTY-----SPSSPYN---SGTSPDYSPSSPQFSPS- 428
SP SPS +P SP SYSP+SP SP+SPY+ S TSP YSP+SP +SP+
Sbjct: 1721 SPFSPSNNPMSPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSPTF 1780
Query: 427 TGYSPSQPGY-------SPSSTSQ---YTPKT 362
YSP P Y SPS T Q Y+P +
Sbjct: 1781 APYSPQSPSYGAGQGPLSPSFTVQSPRYSPSS 1812
[211][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
uvarioides RepID=Q9AXN1_9FLOR
Length = 1712
Score = 64.7 bits (156), Expect = 5e-09
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 26/90 (28%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS-------PSSPTYSPSSP-YNSGTSP--------------DYSP 452
YSPTSP+++PTSP YS P + YSP+ P YN+ SP YSP
Sbjct: 1603 YSPTSPAFTPTSPGYSSATGPGRPGTGAYSPTGPSYNAAASPGYQSGINYSPGSPHTYSP 1662
Query: 451 SSPQFSPST----GYSPSQPGYSPSSTSQY 374
+SP F+P + GYSPS P Y+P ++ Y
Sbjct: 1663 NSPVFTPRSPAAHGYSPSTPQYNPQGSNPY 1692
[212][TOP]
>UniRef100_Q01K81 H0525C06.3 protein n=2 Tax=Oryza sativa RepID=Q01K81_ORYSA
Length = 350
Score = 64.3 bits (155), Expect = 6e-09
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 17/81 (20%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS-------SPQFSPSTGYSP----SQ 407
SP YSP++P +SP YSPS+P SPDY+PS SP ++PST +SP S
Sbjct: 175 SPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYAPSTPWSPPRRASS 234
Query: 406 PGYSPS------STSQYTPKT 362
P YSPS ++ YTP T
Sbjct: 235 PDYSPSTPPRRAASPNYTPST 255
Score = 55.5 bits (132), Expect = 3e-06
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSP---SS 386
+SP YSP++P +SP Y+PS+P SPDYSPSSP P SP SP ++
Sbjct: 233 SSPDYSPSTPPRRAASPNYTPSTPPRRAASPDYSPSSP---PRRAASPEYTQLSPPRRAA 289
Query: 385 TSQYTPKT 362
+ Y P T
Sbjct: 290 SPDYNPST 297
Score = 54.7 bits (130), Expect = 5e-06
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 17/81 (20%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS----------SPQFSPST-GYSPSQ 407
SP Y+P++P +SP Y+PS+P+ SPD++PS SP +SPST +
Sbjct: 130 SPEYTPSTPWRRAASPDYTPSTPWRRAASPDHAPSPPWSPSRRAASPDYSPSTPPRRAAS 189
Query: 406 PGYSPS------STSQYTPKT 362
P YSPS ++ YTP T
Sbjct: 190 PDYSPSTPPRRAASPDYTPST 210
Score = 54.3 bits (129), Expect = 6e-06
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 18/78 (23%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPS-------SPTYSPSSPYN---SGTSPDYSPSS-PQFSPSTGY 419
YSP++P SP Y+PS SP Y+PS+P++ +SPDYSPS+ P+ + S Y
Sbjct: 192 YSPSTPPRRAASPDYTPSTPWRRAASPDYAPSTPWSPPRRASSPDYSPSTPPRRAASPNY 251
Query: 418 SPS-------QPGYSPSS 386
+PS P YSPSS
Sbjct: 252 TPSTPPRRAASPDYSPSS 269
[213][TOP]
>UniRef100_C6F098 RNA polymerase II (Fragment) n=2 Tax=Plasmodium vinckei
RepID=C6F098_PLAVN
Length = 161
Score = 64.3 bits (155), Expect = 6e-09
Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 5/64 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPG 401
Y+ SP YS TSP YSP+SP YSPSSP N+ +SP YSP +SP+FSP S YS S P
Sbjct: 35 YNIMSPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPV 94
Query: 400 YSPS 389
Y S
Sbjct: 95 YDKS 98
Score = 58.5 bits (140), Expect = 3e-07
Identities = 37/77 (48%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSPDYSPSSPQFSPS--- 428
YS TSP YSPTSP YSPSSP YS +SP S TSP YS SSP + S
Sbjct: 42 YSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKSENM 101
Query: 427 TGYSPSQPGYSPSSTSQ 377
G +P P Y S Q
Sbjct: 102 AGKNPLSPAYMLQSRVQ 118
[214][TOP]
>UniRef100_UPI0001792AA2 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum
RepID=UPI0001792AA2
Length = 649
Score = 63.2 bits (152), Expect = 1e-08
Identities = 31/66 (46%), Positives = 41/66 (62%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
Y +SPSY +SPSY SS +Y SSP G+SP Y SSP + S+ Y+ + P YS SS
Sbjct: 474 YGGSSPSYGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSSSLYAGNSPSYSGSS 533
Query: 385 TSQYTP 368
+S +P
Sbjct: 534 SSYGSP 539
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST----GYSPSQPGY 398
Y +SPSY +SPSY SSP+Y SSP G+SP Y SS + S+ G SPS G
Sbjct: 453 YGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGS 512
Query: 397 SPS--STSQY 374
SPS S+S Y
Sbjct: 513 SPSYGSSSLY 522
Score = 55.5 bits (132), Expect = 3e-06
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
Y +S SY +SPSY SSP+Y SSP G+SP Y +SP + S+ Y S P Y S
Sbjct: 376 YGGSSSSYGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGS 435
Query: 388 STS 380
S S
Sbjct: 436 SHS 438
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/70 (47%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF---SPSTG-----YSPS 410
Y +SPSY +S SY SSP+Y SSP G+SP Y SSP + SPS G Y S
Sbjct: 439 YGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSYGGS 498
Query: 409 QPGYSPSSTS 380
P Y SS S
Sbjct: 499 SPSYGGSSPS 508
Score = 55.1 bits (131), Expect = 4e-06
Identities = 33/70 (47%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF---SPSTG-----YSPS 410
Y +SPSY +SPSY SSP+Y SSP G SP Y SS + SPS G Y S
Sbjct: 383 YGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGS 442
Query: 409 QPGYSPSSTS 380
P Y SS S
Sbjct: 443 SPSYGGSSHS 452
Score = 54.7 bits (130), Expect = 5e-06
Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSP-S 389
Y +SPSY +SPSY SSP+Y SS Y +G SP YS SS + + Y PS SP
Sbjct: 495 YGGSSPSYGGSSPSYGGSSPSYGSSSLY-AGNSPSYSGSSSSYGSPSPYKPSYGSPSPYK 553
Query: 388 STSQY 374
S+S Y
Sbjct: 554 SSSSY 558
[215][TOP]
>UniRef100_Q7RJS0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RJS0_PLAYO
Length = 2312
Score = 63.2 bits (152), Expect = 1e-08
Identities = 36/61 (59%), Positives = 42/61 (68%), Gaps = 5/61 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPG 401
Y+ SP YS TSP YSP+SP YSPSSP N+ +SP YSP +SP+FSP S YS S P
Sbjct: 2186 YNIMSPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPV 2245
Query: 400 Y 398
Y
Sbjct: 2246 Y 2246
Score = 58.5 bits (140), Expect = 3e-07
Identities = 37/78 (47%), Positives = 44/78 (56%), Gaps = 22/78 (28%)
Frame = -3
Query: 553 SPSYSPTSPS--------YSPSSP------------TYSPSSPYNSGTSPDYSPSSPQFS 434
SPSYSPTSP+ YSP+SP Y+ SP S TSP YSP+SPQ+S
Sbjct: 2149 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYS 2208
Query: 433 PSTGY--SPSQPGYSPSS 386
PS+ +PS P YSP S
Sbjct: 2209 PSSPVPNNPSSPQYSPYS 2226
Score = 57.4 bits (137), Expect = 7e-07
Identities = 36/77 (46%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSPDYSPSSPQFSPS--- 428
YS TSP YSPTSP YSPSSP YS +SP S TSP YS SSP + +
Sbjct: 2193 YSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKNENM 2252
Query: 427 TGYSPSQPGYSPSSTSQ 377
G +P P Y S Q
Sbjct: 2253 AGKNPLSPAYMLQSRVQ 2269
[216][TOP]
>UniRef100_C6F096 RNA polymerase II (Fragment) n=1 Tax=Plasmodium yoelii nigeriensis
RepID=C6F096_9APIC
Length = 161
Score = 63.2 bits (152), Expect = 1e-08
Identities = 36/61 (59%), Positives = 42/61 (68%), Gaps = 5/61 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPG 401
Y+ SP YS TSP YSP+SP YSPSSP N+ +SP YSP +SP+FSP S YS S P
Sbjct: 35 YNIMSPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPV 94
Query: 400 Y 398
Y
Sbjct: 95 Y 95
Score = 57.4 bits (137), Expect = 7e-07
Identities = 36/77 (46%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSPDYSPSSPQFSPS--- 428
YS TSP YSPTSP YSPSSP YS +SP S TSP YS SSP + +
Sbjct: 42 YSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKTENM 101
Query: 427 TGYSPSQPGYSPSSTSQ 377
G +P P Y S Q
Sbjct: 102 AGKNPLSPAYMLQSRVQ 118
[217][TOP]
>UniRef100_C6F093 RNA polymerase II (Fragment) n=2 Tax=Plasmodium yoelii
RepID=C6F093_PLAYO
Length = 161
Score = 63.2 bits (152), Expect = 1e-08
Identities = 36/61 (59%), Positives = 42/61 (68%), Gaps = 5/61 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPG 401
Y+ SP YS TSP YSP+SP YSPSSP N+ +SP YSP +SP+FSP S YS S P
Sbjct: 35 YNIMSPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPV 94
Query: 400 Y 398
Y
Sbjct: 95 Y 95
Score = 57.4 bits (137), Expect = 7e-07
Identities = 36/77 (46%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSPDYSPSSPQFSPS--- 428
YS TSP YSPTSP YSPSSP YS +SP S TSP YS SSP + +
Sbjct: 42 YSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKNENM 101
Query: 427 TGYSPSQPGYSPSSTSQ 377
G +P P Y S Q
Sbjct: 102 AGKNPLSPAYMLQSRVQ 118
[218][TOP]
>UniRef100_C6F091 RNA polymerase II (Fragment) n=1 Tax=Plasmodium berghei
RepID=C6F091_PLABE
Length = 161
Score = 63.2 bits (152), Expect = 1e-08
Identities = 36/61 (59%), Positives = 42/61 (68%), Gaps = 5/61 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPG 401
Y+ SP YS TSP YSP+SP YSPSSP N+ +SP YSP +SP+FSP S YS S P
Sbjct: 35 YNIMSPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPV 94
Query: 400 Y 398
Y
Sbjct: 95 Y 95
Score = 59.3 bits (142), Expect = 2e-07
Identities = 37/77 (48%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSPDYSPSSPQFSPS--- 428
YS TSP YSPTSP YSPSSP YS +SP S TSP YS SSP + +
Sbjct: 42 YSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKNENM 101
Query: 427 TGYSPSQPGYSPSSTSQ 377
TG +P P Y S Q
Sbjct: 102 TGKNPLSPAYMLQSRVQ 118
[219][TOP]
>UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4RMP1_MAGGR
Length = 1757
Score = 62.4 bits (150), Expect = 2e-08
Identities = 39/93 (41%), Positives = 46/93 (49%), Gaps = 18/93 (19%)
Frame = -3
Query: 565 YSPTSP----------SYSPTSPSYSPSSPT-----YSPSSPYNSG---TSPDYSPSSPQ 440
+ PTSP YSPTSP+Y P SPT YSP+SP G TSP YSP+SP
Sbjct: 1616 FQPTSPIMRHGAGDSMGYSPTSPTYQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPS 1675
Query: 439 FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDP 341
FSP SP SP S +P + + P
Sbjct: 1676 FSPGGATSPMYYVGSPQHASPTSPNAHYSPTSP 1708
Score = 60.8 bits (146), Expect = 7e-08
Identities = 44/98 (44%), Positives = 49/98 (50%), Gaps = 25/98 (25%)
Frame = -3
Query: 559 PTSP-SYSPTSP------SYSPSSPT--YSPSSPYNSG-----TSPDYSPSSPQFSP--- 431
PTSP S SPTSP SYSP+SP YSP+SP G +SP +SPSSP F P
Sbjct: 1562 PTSPFSTSPTSPFSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSFSPSSPSFQPTSP 1621
Query: 430 --------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 341
S GYSP+ P Y P S P DN P
Sbjct: 1622 IMRHGAGDSMGYSPTSPTYQPGS-----PTGGDNHYSP 1654
Score = 58.9 bits (141), Expect = 3e-07
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 14/80 (17%)
Frame = -3
Query: 565 YSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF----SPSTGYSPSQ 407
YSPTSP+ SPTSP YSP+SP++SP TSP Y SPQ SP+ YSP+
Sbjct: 1652 YSPTSPAQFGASPTSPLYSPASPSFSPGG----ATSPMYYVGSPQHASPTSPNAHYSPTS 1707
Query: 406 PGY-------SPSSTSQYTP 368
P + SP+S Y+P
Sbjct: 1708 PSFQRSPAQASPTSPGPYSP 1727
Score = 58.2 bits (139), Expect = 4e-07
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 24/86 (27%)
Frame = -3
Query: 565 YSPTSPS-----YSPTSPSYSPSSPTYSPSSPYN----------SGTSPDYSPSSP---- 443
YSPTSP Y +SPS+SPSSP++ P+SP S TSP Y P SP
Sbjct: 1590 YSPTSPMMDGGRYGASSPSFSPSSPSFQPTSPIMRHGAGDSMGYSPTSPTYQPGSPTGGD 1649
Query: 442 -QFSPST----GYSPSQPGYSPSSTS 380
+SP++ G SP+ P YSP+S S
Sbjct: 1650 NHYSPTSPAQFGASPTSPLYSPASPS 1675
[220][TOP]
>UniRef100_Q4UCP5 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UCP5_THEAN
Length = 1678
Score = 62.0 bits (149), Expect = 3e-08
Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 10/78 (12%)
Frame = -3
Query: 565 YSPTSP--------SYSPTSPSYSPSSPTYSPSSPYN--SGTSPDYSPSSPQFSPSTGYS 416
YSPTSP + SPTSP YSP+ YSP+SP + S TSP YSP+ SP+ GY+
Sbjct: 1575 YSPTSPMSPTSPTSALSPTSPVYSPA---YSPTSPTSAMSPTSPVYSPAYSPTSPNLGYA 1631
Query: 415 PSQPGYSPSSTSQYTPKT 362
P+ P YSP+ Y+P T
Sbjct: 1632 PTSPVYSPA----YSPTT 1645
Score = 58.5 bits (140), Expect = 3e-07
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSP----SYSPTSPS--YSPSSPTYSPSSPYNSGTSPD--YSPSSPQFSPSTGYSPSQ 407
SPTSP +YSPTSP+ SP+SP YSP+ S TSP+ Y+P+SP +SP+ YSP+
Sbjct: 1591 SPTSPVYSPAYSPTSPTSAMSPTSPVYSPAY---SPTSPNLGYAPTSPVYSPA--YSPTT 1645
Query: 406 PGYSPSSTSQYTP 368
P Y S TS +P
Sbjct: 1646 PNYGYSPTSPLSP 1658
Score = 58.5 bits (140), Expect = 3e-07
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 10/83 (12%)
Frame = -3
Query: 565 YSPTSPS--YSPTSPSYSPS-SPT-----YSPSSPYNSGTSPDYSPSSPQF--SPSTGYS 416
YSPTSP+ SPTSP YSP+ SPT Y+P+SP S P YSP++P + SP++ S
Sbjct: 1601 YSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTSPVYS---PAYSPTTPNYGYSPTSPLS 1657
Query: 415 PSQPGYSPSSTSQYTPKTNDNKD 347
P+ P YSP T ++P ++ D
Sbjct: 1658 PTSPAYSP--TDPFSPNPFEDID 1678
[221][TOP]
>UniRef100_Q25655 RNA polymerase largest subunit (Fragment) n=1 Tax=Plasmodium
berghei RepID=Q25655_PLABE
Length = 204
Score = 62.0 bits (149), Expect = 3e-08
Identities = 35/61 (57%), Positives = 42/61 (68%), Gaps = 5/61 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPG 401
Y+ SP YS TSP YSP+SP YSP+SP N+ +SP YSP +SP+FSP S YS S P
Sbjct: 78 YNIMSPVYSVTSPKYSPTSPKYSPTSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPV 137
Query: 400 Y 398
Y
Sbjct: 138 Y 138
Score = 59.7 bits (143), Expect = 1e-07
Identities = 37/70 (52%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS---TGYSPSQ 407
YSPTSP YSPTSP +PSSP YSP +SP S TSP YS SSP + + TG +P
Sbjct: 92 YSPTSPKYSPTSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKNENMTGKNPLS 151
Query: 406 PGYSPSSTSQ 377
P Y S Q
Sbjct: 152 PAYMLQSRVQ 161
Score = 56.6 bits (135), Expect = 1e-06
Identities = 40/92 (43%), Positives = 47/92 (51%), Gaps = 32/92 (34%)
Frame = -3
Query: 565 YSPTSPS--------YSPTSPS-------------------YSPSSPTYSPSSPYNSGTS 467
YSPTSP+ YSPTSP YS +SP YSP+SP S TS
Sbjct: 44 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYSPTS 103
Query: 466 P-DYSPSSPQFSP----STGYSPSQPGYSPSS 386
P +PSSPQ+SP S +SP+ P YS SS
Sbjct: 104 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISS 135
Score = 55.8 bits (133), Expect = 2e-06
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 22/78 (28%)
Frame = -3
Query: 553 SPSYSPTSPS--------YSPSSP------------TYSPSSPYNSGTSPDYSPSSPQFS 434
SPSYSPTSP+ YSP+SP Y+ SP S TSP YSP+SP++S
Sbjct: 41 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYS 100
Query: 433 PSTGY--SPSQPGYSPSS 386
P++ +PS P YSP S
Sbjct: 101 PTSPVPNNPSSPQYSPYS 118
[222][TOP]
>UniRef100_O04142 DNA-directed RNA polymerase (Fragment) n=1 Tax=Porphyra yezoensis
RepID=O04142_PORYE
Length = 1685
Score = 61.6 bits (148), Expect = 4e-08
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFS----PSTGY-SPSQ 407
Y+P SP+Y TSP YSPS+P + SSP G SP YSP+SP P+ GY SP
Sbjct: 1578 YAPASPAYMATSPGMGYSPSTPALAVSSP---GYSPGYSPTSPSVGARGGPAAGYASPQS 1634
Query: 406 PGYSPSSTSQYTPKT 362
PGY P+S + P T
Sbjct: 1635 PGYVPTSPAYARPGT 1649
Score = 53.9 bits (128), Expect = 8e-06
Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 18/78 (23%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSP-----------YNSGTSPDYSPSSPQFS-PST- 425
YSP++P+ + +SP YSP YSP+SP Y S SP Y P+SP ++ P T
Sbjct: 1594 YSPSTPALAVSSPGYSPG---YSPTSPSVGARGGPAAGYASPQSPGYVPTSPAYARPGTV 1650
Query: 424 -----GYSPSQPGYSPSS 386
YSPS P YSPSS
Sbjct: 1651 VAAANVYSPSSPAYSPSS 1668
[223][TOP]
>UniRef100_C6ZIW1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium ovale
RepID=C6ZIW1_9APIC
Length = 168
Score = 61.6 bits (148), Expect = 4e-08
Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSP 392
YS TSP YSPTSP YSP+SP +PSSP++ SP YS +SP+FSP S YS S P Y
Sbjct: 50 YSVTSPKYSPTSPQYSPTSPVPNNPSSPHSPHYSP-YSITSPKFSPTSPAYSISSPVYDK 108
Query: 391 SS 386
++
Sbjct: 109 NA 110
Score = 60.1 bits (144), Expect = 1e-07
Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP----STGYSPSQPGY 398
Y+ SP YS TSP YSP+SP YSP+SP + S SP SP +SP S +SP+ P Y
Sbjct: 43 YNVMSPVYSVTSPKYSPTSPQYSPTSPVPNNPS---SPHSPHYSPYSITSPKFSPTSPAY 99
Query: 397 SPSS 386
S SS
Sbjct: 100 SISS 103
[224][TOP]
>UniRef100_Q4Y307 Putative uncharacterized protein n=1 Tax=Plasmodium chabaudi
RepID=Q4Y307_PLACH
Length = 133
Score = 61.2 bits (147), Expect = 5e-08
Identities = 36/64 (56%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPG 401
Y+ S YS TSP YSP+SP YSPSSP N+ +SP YSP +SP+FSP S YS S P
Sbjct: 7 YNIMSXVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPV 66
Query: 400 YSPS 389
Y S
Sbjct: 67 YDKS 70
Score = 58.5 bits (140), Expect = 3e-07
Identities = 37/77 (48%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSPDYSPSSPQFSPS--- 428
YS TSP YSPTSP YSPSSP YS +SP S TSP YS SSP + S
Sbjct: 14 YSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKSENM 73
Query: 427 TGYSPSQPGYSPSSTSQ 377
G +P P Y S Q
Sbjct: 74 AGKNPLSPAYMLQSRVQ 90
[225][TOP]
>UniRef100_C6F1F7 DNA-directed RNA polymerase n=1 Tax=Plasmodium gallinaceum
RepID=C6F1F7_PLAGA
Length = 2200
Score = 61.2 bits (147), Expect = 5e-08
Identities = 36/71 (50%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPG 401
Y+ SP YS TSP YSP SP YSP+SP N+ SP YSP +SP+FSP S YS S P
Sbjct: 2075 YNVMSPVYSVTSPKYSPMSPQYSPTSPVANNPGSPHYSPYSITSPKFSPTSPAYSISSPV 2134
Query: 400 YSPSSTSQYTP 368
Y ++ P
Sbjct: 2135 YDKNAVLNNQP 2145
Score = 60.5 bits (145), Expect = 9e-08
Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 20/76 (26%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYN------------------SGTSPDYSPSSPQFSPS 428
SPSYSPTSPSY+ + YSP+SP N S TSP YSP SPQ+SP+
Sbjct: 2040 SPSYSPTSPSYNADNVYYSPTSPKNQMDDVKSNIKYNVMSPVYSVTSPKYSPMSPQYSPT 2099
Query: 427 T--GYSPSQPGYSPSS 386
+ +P P YSP S
Sbjct: 2100 SPVANNPGSPHYSPYS 2115
[226][TOP]
>UniRef100_C6F097 RNA polymerase II (Fragment) n=1 Tax=Plasmodium yoelii
RepID=C6F097_9APIC
Length = 161
Score = 61.2 bits (147), Expect = 5e-08
Identities = 35/61 (57%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPG 401
Y+ SP YS TSP YSP+ P YSPSSP N+ +SP YSP +SP+FSP S YS S P
Sbjct: 35 YNIMSPVYSVTSPKYSPTXPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPV 94
Query: 400 Y 398
Y
Sbjct: 95 Y 95
Score = 55.5 bits (132), Expect = 3e-06
Identities = 35/77 (45%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSPDYSPSSPQFSPS--- 428
YS TSP YSPT P YSPSSP YS +SP S TSP YS SSP + +
Sbjct: 42 YSVTSPKYSPTXPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKTENM 101
Query: 427 TGYSPSQPGYSPSSTSQ 377
G +P P Y S Q
Sbjct: 102 AGKNPLSPAYMLQSRVQ 118
[227][TOP]
>UniRef100_B9G524 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9G524_ORYSJ
Length = 536
Score = 60.8 bits (146), Expect = 7e-08
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSST 383
P+ PSY P+ PSY PS P Y+P P + P PS P++SP Y PS P Y+P
Sbjct: 337 PSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPP 396
Query: 382 SQYTPKTNDNKDDP 341
S Y P + +P
Sbjct: 397 S-YVPSPPEYAPEP 409
Score = 60.8 bits (146), Expect = 7e-08
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
Y P+ PSY P+ P Y+P P Y+P P + P+YSP P + PS Y+P P Y P
Sbjct: 342 YEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVP- 400
Query: 388 STSQYTPK 365
S +Y P+
Sbjct: 401 SPPEYAPE 408
Score = 57.4 bits (137), Expect = 7e-07
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSPS 389
Y+P P P+ P YSP P+Y PS P + P Y PS P+++P Y+P PG +P
Sbjct: 363 YAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITP- 421
Query: 388 STSQYTPK 365
S +Y P+
Sbjct: 422 SPPEYAPE 429
Score = 55.5 bits (132), Expect = 3e-06
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSST 383
P+ P P+ PSY PS P+Y PS P + P Y+P P PS YSP P Y P S
Sbjct: 330 PSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVP-SP 388
Query: 382 SQYTPK 365
QY P+
Sbjct: 389 PQYAPQ 394
[228][TOP]
>UniRef100_Q4N0F9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N0F9_THEPA
Length = 1681
Score = 60.5 bits (145), Expect = 9e-08
Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 10/69 (14%)
Frame = -3
Query: 565 YSPTSP--------SYSPTSPSYSPSSPTYSPSSPYN--SGTSPDYSPSSPQFSPSTGYS 416
YSPTSP + SPTSP YSP+ YSP+SP + S TSP YSP+ SP+ GY+
Sbjct: 1578 YSPTSPMSPTSPANALSPTSPVYSPA---YSPTSPTSAMSPTSPVYSPAYSPTSPNLGYA 1634
Query: 415 PSQPGYSPS 389
P+ P YSP+
Sbjct: 1635 PTSPVYSPA 1643
Score = 58.9 bits (141), Expect = 3e-07
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 8/73 (10%)
Frame = -3
Query: 562 SPTSP----SYSPTSPS--YSPSSPTYSPSSPYNSGTSPD--YSPSSPQFSPSTGYSPSQ 407
SPTSP +YSPTSP+ SP+SP YSP+ S TSP+ Y+P+SP +SP+ YSP+
Sbjct: 1594 SPTSPVYSPAYSPTSPTSAMSPTSPVYSPAY---SPTSPNLGYAPTSPVYSPA--YSPTS 1648
Query: 406 PGYSPSSTSQYTP 368
P Y S TS +P
Sbjct: 1649 PNYGYSPTSPLSP 1661
Score = 58.9 bits (141), Expect = 3e-07
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 10/76 (13%)
Frame = -3
Query: 565 YSPTSPS--YSPTSPSYSPS-SPT-----YSPSSPYNSGTSPDYSPSSPQF--SPSTGYS 416
YSPTSP+ SPTSP YSP+ SPT Y+P+SP S P YSP+SP + SP++ S
Sbjct: 1604 YSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTSPVYS---PAYSPTSPNYGYSPTSPLS 1660
Query: 415 PSQPGYSPSSTSQYTP 368
P+ P YSP T ++P
Sbjct: 1661 PTSPAYSP--TDPFSP 1674
[229][TOP]
>UniRef100_UPI0001796FA8 PREDICTED: zinc finger protein 768 n=1 Tax=Equus caballus
RepID=UPI0001796FA8
Length = 547
Score = 60.1 bits (144), Expect = 1e-07
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+ P SP + SP + P SP ++P S + SP++ P SP++ P S GY P PGY S
Sbjct: 79 FEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSPRYEPQSPGYEPKSPGYE-S 137
Query: 388 STSQYTPKT 362
+S+Y K+
Sbjct: 138 QSSRYESKS 146
Score = 54.3 bits (129), Expect = 6e-06
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 15/89 (16%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 425
P SP + P +P + SP + P SP SP + P SP+F+P S
Sbjct: 60 PQSPGFEPQNPEFESQSPRFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSP 119
Query: 424 GYSPSQPGYSPSSTSQYTPKTNDNKDDPG 338
Y P PGY P S + + PG
Sbjct: 120 RYEPQSPGYEPKSPGYESQSSRYESKSPG 148
[230][TOP]
>UniRef100_UPI0000E241DC PREDICTED: hypothetical protein n=1 Tax=Pan troglodytes
RepID=UPI0000E241DC
Length = 1156
Score = 60.1 bits (144), Expect = 1e-07
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+ P SP + SP P SP ++P SP + SP++ SP++ P S GY P PGY P
Sbjct: 688 FEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPR 747
Query: 388 STSQYTPKT 362
S Y P++
Sbjct: 748 SPG-YEPRS 755
Score = 55.8 bits (133), Expect = 2e-06
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 425
P SP + P SP + P SP + P SP SP P SP+F+P S
Sbjct: 669 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 728
Query: 424 GYSPSQPGYSPSSTSQYTPKT 362
Y P PGY P S Y P++
Sbjct: 729 RYEPQSPGYEPRSPG-YEPRS 748
Score = 55.1 bits (131), Expect = 4e-06
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSST 383
P SP ++P SP SP + SP SP Y P SP + P S GY P PGY S +
Sbjct: 704 PPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYEPRSPGYE-SES 762
Query: 382 SQYTPKTNDNK 350
S+Y + + K
Sbjct: 763 SRYESQNTELK 773
[231][TOP]
>UniRef100_UPI00005878B7 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI00005878B7
Length = 374
Score = 60.1 bits (144), Expect = 1e-07
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYS-- 395
Y+ + PSY+ ++PSY S+P Y ++PY + T+P Y+ S+P ++ ST Y+ S+P Y+
Sbjct: 120 YATSRPSYTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYATS 179
Query: 394 ----PSSTSQYTPKT 362
S+TS YT T
Sbjct: 180 RPYFTSTTSSYTAST 194
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
Y+ ++PSY ++P Y+ S+P+Y S+PY + + P Y+ S+P ++ ST Y+ S+P Y P+
Sbjct: 29 YTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSY-PT 87
Query: 388 STSQYTPKT 362
ST YT T
Sbjct: 88 STPYYTTST 96
Score = 55.5 bits (132), Expect = 3e-06
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPS 389
Y T+P Y+ T+PSY+ S+P+Y+ S+P + + P Y+ S P F+ +T Y+ S P Y+
Sbjct: 141 YRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTSTTSSYTASTPSYT-E 199
Query: 388 STSQYT 371
ST+ YT
Sbjct: 200 STASYT 205
Score = 53.9 bits (128), Expect = 8e-06
Identities = 24/68 (35%), Positives = 39/68 (57%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
Y+ ++PSY ++P Y+ S P Y+ S+P + ++P Y+ S P + ST Y + Y +
Sbjct: 43 YTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPTSTPYYTTSTPYYTLT 102
Query: 385 TSQYTPKT 362
TS YT T
Sbjct: 103 TSSYTAST 110
[232][TOP]
>UniRef100_C5Y8R4 Putative uncharacterized protein Sb06g017200 n=1 Tax=Sorghum
bicolor RepID=C5Y8R4_SORBI
Length = 367
Score = 60.1 bits (144), Expect = 1e-07
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 12/80 (15%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS--------YSPSSPTYSPSSPYNSGT--SPDYSPSSPQFSPSTGYS 416
YSP +P Y+P +PS YSP+SP Y+P +S SPDYSP+SP+++P T S
Sbjct: 133 YSPATPEYTPLTPSSQRSGSPVYSPASPEYTPLLTPSSRRFGSPDYSPASPEYTPLTPSS 192
Query: 415 --PSQPGYSPSSTSQYTPKT 362
P YSP S +YTP T
Sbjct: 193 QRSGSPVYSPGS-PEYTPLT 211
Score = 59.7 bits (143), Expect = 1e-07
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 11/79 (13%)
Frame = -3
Query: 565 YSPTSPSYSPT---------SPSYSPSSPTYSPSSPYNSGT-SPDYSPSSPQFSPSTGYS 416
YSP SP Y+P SP YSP+SP Y+P +P + + SP YSP SP+++P T
Sbjct: 155 YSPASPEYTPLLTPSSRRFGSPDYSPASPEYTPLTPSSQRSGSPVYSPGSPEYTPLTPPK 214
Query: 415 PS-QPGYSPSSTSQYTPKT 362
S P Y+P++ + YTP++
Sbjct: 215 RSGSPAYTPAA-ANYTPRS 232
[233][TOP]
>UniRef100_P13983 Extensin n=1 Tax=Nicotiana tabacum RepID=EXTN_TOBAC
Length = 620
Score = 60.1 bits (144), Expect = 1e-07
Identities = 33/69 (47%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = -3
Query: 565 YSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSP 392
YSP P+YSP PS YSP P YSPS P +P +SP P +SP YSP P Y P
Sbjct: 282 YSPPPPTYSPPPPSPIYSPPPPAYSPSPP--PTPTPTFSPPPPAYSPPPTYSPPPPTYLP 339
Query: 391 SSTSQ-YTP 368
+S Y+P
Sbjct: 340 LPSSPIYSP 348
Score = 58.9 bits (141), Expect = 3e-07
Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = -3
Query: 565 YSPTSPSYSPT---SPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFSPSTGYSPSQPG 401
YSP P+Y+ + SP+YSP PTYSP SP S P YSPS P +P+ +SP P
Sbjct: 265 YSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPP-TPTPTFSPPPPA 323
Query: 400 YSPSSTSQYTPKT 362
YSP T P T
Sbjct: 324 YSPPPTYSPPPPT 336
Score = 55.5 bits (132), Expect = 3e-06
Identities = 34/82 (41%), Positives = 40/82 (48%), Gaps = 16/82 (19%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS---PSSPTYSPSSP-YNSGTSPDYSPSSPQFS-----------P 431
YSP P+YSP P+Y+ P PTYSP P Y+ P YSP P +S P
Sbjct: 409 YSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPP 468
Query: 430 STGYSPSQPGYSPSSTSQ-YTP 368
YSP P YSP S Y+P
Sbjct: 469 PPTYSPPPPAYSPPPPSPIYSP 490
[234][TOP]
>UniRef100_B8BEN2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BEN2_ORYSI
Length = 519
Score = 59.7 bits (143), Expect = 1e-07
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPS 389
Y P+ PSY P+ P Y+P P Y+P P + P+YSP P + PS Y+P P Y PS
Sbjct: 305 YEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPS 364
Score = 59.3 bits (142), Expect = 2e-07
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSST 383
P+ PSY P+ PSY PS P Y+P P + P PS P++SP Y PS P Y+P
Sbjct: 300 PSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPP 359
Query: 382 SQYTP 368
S Y P
Sbjct: 360 S-YVP 363
Score = 55.5 bits (132), Expect = 3e-06
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSST 383
P+ P P+ PSY PS P+Y PS P + P Y+P P PS YSP P Y P S
Sbjct: 293 PSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVP-SP 351
Query: 382 SQYTPK 365
QY P+
Sbjct: 352 PQYAPQ 357
Score = 54.7 bits (130), Expect = 5e-06
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSPS 389
Y+P P Y+P P PS P YSP P + P Y+P P + PS Y+P PG +P
Sbjct: 319 YAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPVYAPYPPGITP- 377
Query: 388 STSQYTPK 365
S +Y P+
Sbjct: 378 SPPEYAPE 385
[235][TOP]
>UniRef100_Q1WKU4 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila erecta RepID=Q1WKU4_DROER
Length = 760
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 685 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 744
Query: 406 PGYSPSS 386
P YSP+S
Sbjct: 745 PNYSPTS 751
Score = 56.6 bits (135), Expect = 1e-06
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQP 404
Y P SPS SPSYSP+SP Y+ SSP G SP+YSPSSP +SP++ Y+ + P
Sbjct: 710 YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYASASP 759
[236][TOP]
>UniRef100_Q1WKU0 Putative RNA polymerase II 215 kD subunit (Fragment) n=2
Tax=melanogaster subgroup RepID=Q1WKU0_DROYA
Length = 766
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 685 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 744
Query: 406 PGYSPSS 386
P YSP+S
Sbjct: 745 PNYSPTS 751
Score = 59.3 bits (142), Expect = 2e-07
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSPS 389
Y P SPS SPSYSP+SP Y+ SSP G SP+YSPSSP +SP++ Y+ + P Y+ +
Sbjct: 710 YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYASASPRYAST 764
Query: 388 S 386
+
Sbjct: 765 T 765
[237][TOP]
>UniRef100_B7Z2Y7 cDNA FLJ59521, moderately similar to Zinc finger and SCAN
domain-containing protein 2 n=1 Tax=Homo sapiens
RepID=B7Z2Y7_HUMAN
Length = 453
Score = 58.9 bits (141), Expect = 3e-07
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+ P SP + SP P SP ++P SP + SP++ SP++ P S GY P PGY P
Sbjct: 48 FEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPR 107
Query: 388 S 386
S
Sbjct: 108 S 108
Score = 55.8 bits (133), Expect = 2e-06
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 425
P SP + P SP + P SP + P SP SP P SP+F+P S
Sbjct: 29 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 88
Query: 424 GYSPSQPGYSPSSTSQYTPKT 362
Y P PGY P S Y P++
Sbjct: 89 RYEPQSPGYEPRSPG-YEPRS 108
[238][TOP]
>UniRef100_B2RD90 cDNA, FLJ96507 n=1 Tax=Homo sapiens RepID=B2RD90_HUMAN
Length = 520
Score = 58.9 bits (141), Expect = 3e-07
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+ P SP + SP P SP ++P SP + SP++ SP++ P S GY P PGY P
Sbjct: 59 FEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPR 118
Query: 388 S 386
S
Sbjct: 119 S 119
Score = 55.8 bits (133), Expect = 2e-06
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 425
P SP + P SP + P SP + P SP SP P SP+F+P S
Sbjct: 40 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 99
Query: 424 GYSPSQPGYSPSSTSQYTPKT 362
Y P PGY P S Y P++
Sbjct: 100 RYEPQSPGYEPRSPG-YEPRS 119
[239][TOP]
>UniRef100_Q9H5H4 Zinc finger protein 768 n=1 Tax=Homo sapiens RepID=ZN768_HUMAN
Length = 540
Score = 58.9 bits (141), Expect = 3e-07
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+ P SP + SP P SP ++P SP + SP++ SP++ P S GY P PGY P
Sbjct: 79 FEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPR 138
Query: 388 S 386
S
Sbjct: 139 S 139
Score = 55.8 bits (133), Expect = 2e-06
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 425
P SP + P SP + P SP + P SP SP P SP+F+P S
Sbjct: 60 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 119
Query: 424 GYSPSQPGYSPSSTSQYTPKT 362
Y P PGY P S Y P++
Sbjct: 120 RYEPQSPGYEPRSPG-YEPRS 139
[240][TOP]
>UniRef100_O09451 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bonnemaisonia hamifera
RepID=O09451_9FLOR
Length = 1732
Score = 58.5 bits (140), Expect = 3e-07
Identities = 41/84 (48%), Positives = 49/84 (58%), Gaps = 17/84 (20%)
Frame = -3
Query: 565 YSPTSPSYSPTSP-SYSPSSPT-YSPSSPYNSGTSPD------------YSPS-SPQFSP 431
Y SP YSP+SP +YSPSSP +SPSSP G SP YS + SP++ P
Sbjct: 1650 YVAASPGYSPSSPGAYSPSSPAAFSPSSPAAGGYSPSTPAYTANAAANQYSYARSPRYPP 1709
Query: 430 S--TGYSPSQPGYSPSSTSQYTPK 365
S G SPS P YSPSS QY+P+
Sbjct: 1710 SYANGTSPSSPQYSPSS-PQYSPR 1732
Score = 57.4 bits (137), Expect = 7e-07
Identities = 35/97 (36%), Positives = 43/97 (44%), Gaps = 29/97 (29%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSP---SSPTYSPSSPYN--------------------SGTSPDYS 455
++P SP+Y PTSP SP SP SP Y+ G S YS
Sbjct: 1573 FAPASPAYRPTSPGPSPYAAQSPAQSPGVQYSPDKSRVQVQRAPPTAPSAAGGGASRSYS 1632
Query: 454 PSSPQF------SPSTGYSPSQPGYSPSSTSQYTPKT 362
PSSP + SP Y + PGYSPSS Y+P +
Sbjct: 1633 PSSPSYNGRGAASPGANYVAASPGYSPSSPGAYSPSS 1669
[241][TOP]
>UniRef100_UPI0000D9F0D9 PREDICTED: similar to zinc finger protein 239 (predicted) n=1
Tax=Macaca mulatta RepID=UPI0000D9F0D9
Length = 650
Score = 57.8 bits (138), Expect = 6e-07
Identities = 30/91 (32%), Positives = 38/91 (41%), Gaps = 15/91 (16%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 425
P SP + P SP + P SP + P SP SP P SP+F+P S
Sbjct: 177 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 236
Query: 424 GYSPSQPGYSPSSTSQYTPKTNDNKDDPGTK 332
Y P PGY P S S + + +P K
Sbjct: 237 RYEPQSPGYEPRSPSYESESSRYESQNPELK 267
Score = 55.1 bits (131), Expect = 4e-06
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+ P SP + SP P SP ++P SP + SP++ SP++ P S GY P P Y S
Sbjct: 196 FEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPSYE-S 254
Query: 388 STSQYTPKTNDNK 350
+S+Y + + K
Sbjct: 255 ESSRYESQNPELK 267
[242][TOP]
>UniRef100_Q1WKU3 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila orena RepID=Q1WKU3_DROOR
Length = 750
Score = 57.8 bits (138), Expect = 6e-07
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPST------GYSPSQ 407
S SPS+SP P SPSSP + SP P + SP YSP+SP ++ S+ YSPS
Sbjct: 685 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 744
Query: 406 PGYSPS 389
P YSP+
Sbjct: 745 PNYSPT 750
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/46 (60%), Positives = 33/46 (71%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 428
Y P SPS SPSYSP+SP Y+ SSP G SP+YSPSSP +SP+
Sbjct: 710 YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPT 750
[243][TOP]
>UniRef100_Q0UCC9 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UCC9_PHANO
Length = 351
Score = 57.8 bits (138), Expect = 6e-07
Identities = 29/63 (46%), Positives = 39/63 (61%)
Frame = -3
Query: 556 TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQ 377
TSP YSP +P ++P SP+Y+P P T+P Y P++P F T YSP+ P P S +
Sbjct: 137 TSPRYSPPTPHFAPRSPSYAPGLP---PTTPTYRPTTPTFIDLTYYSPTPPILMPESPT- 192
Query: 376 YTP 368
YTP
Sbjct: 193 YTP 195
Score = 54.7 bits (130), Expect = 5e-06
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSP----------YNSGTSPDYSPSSPQFSPSTGYSPS 410
P SP PT+ +Y+P+SP YSP++P + TSP YSP +P F+P SPS
Sbjct: 98 PISPGLRPTTSTYTPASPRYSPATPKIRSPRLTMLEDGATSPRYSPPTPHFAPR---SPS 154
Query: 409 QPGYSPSSTSQYTPKT 362
P +T Y P T
Sbjct: 155 YAPGLPPTTPTYRPTT 170
Score = 53.9 bits (128), Expect = 8e-06
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 18/84 (21%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYS----PSSPTYSPSSP------YNSGTSPDYSPSSPQFS-PSTGY 419
YSP +P ++P SPSY+ P++PTY P++P Y S T P P SP ++ PS Y
Sbjct: 141 YSPPTPHFAPRSPSYAPGLPPTTPTYRPTTPTFIDLTYYSPTPPILMPESPTYTPPSPRY 200
Query: 418 SPS-------QPGYSPSSTSQYTP 368
P+ PGY+P+S +P
Sbjct: 201 YPASFEINLLSPGYAPTSPGIRSP 224
[244][TOP]
>UniRef100_Q7XRB2 OSJNBa0006B20.10 protein n=3 Tax=Oryza sativa RepID=Q7XRB2_ORYSJ
Length = 335
Score = 57.4 bits (137), Expect = 7e-07
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ---FSPSTGYSPSQPGYSPSST 383
SP Y+P SPS +SP Y+P SP SPDY+P+SP + S Y+P P +++
Sbjct: 131 SPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAAASSPDYTPESPPRRRAAS 190
Query: 382 SQYTPKT 362
Y+P T
Sbjct: 191 PDYSPST 197
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 22/90 (24%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGTSPDYSPSSP----------QF 437
YSP++P SP YSPS SP YSPS+P SPDY+P SP Q
Sbjct: 193 YSPSTPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDYTQM 252
Query: 436 SP-----STGYSPSQPGYSPSSTSQYTPKT 362
+P S Y+PS P +++ YTP T
Sbjct: 253 TPPRRAASPDYTPSTPPPPRAASPDYTPST 282
Score = 56.6 bits (135), Expect = 1e-06
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS-PQFSPSTGYSPSQPG-YSPSSTS 380
SP YSP SP +SP Y+P+SP SPDY+P S P+ + S Y+P+ P + +S+
Sbjct: 117 SPDYSPESPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAAASSP 176
Query: 379 QYTPKT 362
YTP++
Sbjct: 177 DYTPES 182
Score = 56.2 bits (134), Expect = 2e-06
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS-PQFSPSTGYSPSQPGYSPSSTSQ 377
SP YSP SP +SP Y+P SP SPDYSP S P+ + S Y+P+ P +S
Sbjct: 89 SPDYSPASPPRRAASPDYTPESPPRRAASPDYSPESPPRRAASPDYTPASPSRRAAS-PD 147
Query: 376 YTPKT 362
YTP++
Sbjct: 148 YTPES 152
Score = 55.1 bits (131), Expect = 4e-06
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS-PQFSPSTGYSPSQP---GYSPSS 386
SP YSP++P +SP YSPS+P SPDYSPS+ P+ + S Y+P P SP
Sbjct: 190 SPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDY 249
Query: 385 TSQYTPKTNDNKD 347
T P+ + D
Sbjct: 250 TQMTPPRRAASPD 262
Score = 53.9 bits (128), Expect = 8e-06
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 11/77 (14%)
Frame = -3
Query: 565 YSPTSPSY--SPTSPSYSP--------SSPTYSPSSPYNSGTSPDYSPSS-PQFSPSTGY 419
Y+P SPS + +SP Y+P +SP YSPS+P SPDYSPS+ P+ + S Y
Sbjct: 162 YTPASPSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDY 221
Query: 418 SPSQPGYSPSSTSQYTP 368
SPS P +S YTP
Sbjct: 222 SPSTPPRRAAS-PDYTP 237
[245][TOP]
>UniRef100_Q4DE19 Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi
RepID=Q4DE19_TRYCR
Length = 292
Score = 57.4 bits (137), Expect = 7e-07
Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPSTGYSPSQPGYSPS 389
Y P P Y P P Y P P Y P P P Y P + +P GY QPGY P
Sbjct: 12 YGPPQPGYGPPQPGYGPPQPGYGPPQPGYGSPQPGYGAPQPGYGAPQPGYGAPQPGYGPP 71
Query: 388 STSQYTPKTNDNKDDPG 338
P+ PG
Sbjct: 72 QPGYGPPQPGYGAPQPG 88
[246][TOP]
>UniRef100_UPI0001A7B205 DNA binding n=1 Tax=Arabidopsis thaliana RepID=UPI0001A7B205
Length = 271
Score = 56.6 bits (135), Expect = 1e-06
Identities = 35/94 (37%), Positives = 44/94 (46%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSS 386
Y SP+YSPTSPSYSP+SP+Y P+S + SP S +SP P GY P
Sbjct: 106 YILKSPTYSPTSPSYSPTSPSYRPNSSSD-------SPDSHSYSPILSSPPEDYGYGPDD 158
Query: 385 TSQYTPKTNDNKDDPGTK*ARLICLRDGSDCADG 284
KT+ K+ + DGS DG
Sbjct: 159 IEAGKMKTDQLKE-----------IGDGSSHVDG 181
[247][TOP]
>UniRef100_UPI0001B7BF92 zinc finger protein 768 n=1 Tax=Rattus norvegicus
RepID=UPI0001B7BF92
Length = 570
Score = 56.6 bits (135), Expect = 1e-06
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 22/88 (25%)
Frame = -3
Query: 559 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP----------------- 431
P SP + P SP + SP + P SP SP + P SP+F+P
Sbjct: 62 PQSPGFEPQSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSS 121
Query: 430 -----STGYSPSQPGYSPSSTSQYTPKT 362
S GY P PGY P S +Y PK+
Sbjct: 122 RYEPQSPGYDPKSPGYEPGS-PRYEPKS 148
Score = 55.5 bits (132), Expect = 3e-06
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPS 389
+ SP + P SP ++P SP P SP S Y P SP + P S GY P P Y P
Sbjct: 88 FESRSPGFVPPSPEFAPRSPESDPQSPEFESQSSRYEPQSPGYDPKSPGYEPGSPRYEPK 147
Query: 388 STSQYTPKTNDNKDDPG 338
S + PG
Sbjct: 148 SPGYGSKSPEFESQSPG 164
Score = 55.5 bits (132), Expect = 3e-06
Identities = 26/56 (46%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPSTGYSPSQPG 401
Y P SP Y P SP Y P SP Y P SP SP++ SP S S GY P G
Sbjct: 123 YEPQSPGYDPKSPGYEPGSPRYEPKSPGYGSKSPEFESQSPGCESQSPGYEPQNSG 178
Score = 54.3 bits (129), Expect = 6e-06
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 565 YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPSTGYSPSQPGYSPS 389
+ S Y P SP Y P SP Y P SP SP Y SP+F S S G PGY P
Sbjct: 116 FESQSSRYEPQSPGYDPKSPGYEPGSPRYEPKSPGYGSKSPEFESQSPGCESQSPGYEPQ 175
Query: 388 ST 383
++
Sbjct: 176 NS 177
[248][TOP]
>UniRef100_C5X5H3 Putative uncharacterized protein Sb02g030096 n=1 Tax=Sorghum
bicolor RepID=C5X5H3_SORBI
Length = 263
Score = 56.6 bits (135), Expect = 1e-06
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = -3
Query: 562 SPTSPSYSPTSPSYSPSSPTYSPSSPYN--SGTSPDYSPSSPQFSPSTGYSPSQPGYSP 392
SPTSP YSPTSP YSP+SP YSP SP + SG++ D SP P +SP+ P + P
Sbjct: 83 SPTSPIYSPTSPIYSPTSPIYSPVSPRHDCSGSTND-SPPPPSPVYRAVHSPTSPNHCP 140
[249][TOP]
>UniRef100_UPI00016E658E UPI00016E658E related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E658E
Length = 1628
Score = 56.2 bits (134), Expect = 2e-06
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSPSQPGYSP 392
SP++SPT S P SP P+SPY SP+YSP+SP + P + GY+P PGYSP
Sbjct: 1560 SPAWSPTPGS--PGSP--GPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSP 1615
Query: 391 SSTSQYTP 368
+S S Y+P
Sbjct: 1616 TSPS-YSP 1622
Score = 55.8 bits (133), Expect = 2e-06
Identities = 26/41 (63%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQFS 434
SP+YSPTSP+Y P SP Y+P SP S TSP YSP+SP +S
Sbjct: 1588 SPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSYS 1628
[250][TOP]
>UniRef100_A9S7U4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9S7U4_PHYPA
Length = 296
Score = 55.8 bits (133), Expect = 2e-06
Identities = 34/67 (50%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Frame = -3
Query: 553 SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS----SPQFSPSTGY-SPSQPGYSPS 389
SP Y+ SP Y SP YSPS Y S SP YSPS SP +SPS Y SP P YSPS
Sbjct: 228 SPPYASPSPVYE--SPPYSPSPVYESPPSPTYSPSPVYKSPTYSPSPVYKSPPSPSYSPS 285
Query: 388 STSQYTP 368
+ P
Sbjct: 286 PVYKSPP 292