BB923924 ( RCE32158 )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BB923924  RCE32158
         (569 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_B7FLW9 Putative uncharacterized protein n=1 Tax=Medica...   206   1e-51
UniRef100_C6T5N3 Putative uncharacterized protein n=1 Tax=Glycin...   170   6e-41
UniRef100_B9S9D8 DNA-directed RNA polymerase II 19 kD polypeptid...   169   2e-40
UniRef100_B9HUM9 Predicted protein n=2 Tax=Populus trichocarpa R...   164   4e-39
UniRef100_B9HKE3 Predicted protein n=1 Tax=Populus trichocarpa R...   163   7e-39
UniRef100_A7NX05 Chromosome chr5 scaffold_2, whole genome shotgu...   162   2e-38
UniRef100_O23322 RNA polymerase II fifth largest subunit like pr...   155   2e-36
UniRef100_A6QRA1 At4g14660 n=1 Tax=Arabidopsis thaliana RepID=A6...   155   2e-36
UniRef100_Q9LIK8 RNA polymerase II fifth largest subunit-like pr...   122   1e-26
UniRef100_Q8LE42 RNA polymerase II fifth largest subunit-like pr...   122   1e-26
UniRef100_B8AZD0 Putative uncharacterized protein n=1 Tax=Oryza ...   113   1e-23
UniRef100_Q75M02 Os05g0157100 protein n=2 Tax=Oryza sativa RepID...   112   1e-23
UniRef100_C5Z0L3 Putative uncharacterized protein Sb09g004460 n=...   107   5e-22
UniRef100_B4FXC7 DNA-directed RNA polymerase II 19 kDa polypepti...   107   8e-22
UniRef100_Q75KS7 Putative receptor kinase n=1 Tax=Oryza sativa J...    99   2e-19
UniRef100_B9FN64 Putative uncharacterized protein n=1 Tax=Oryza ...    99   2e-19
UniRef100_B9HUM8 Predicted protein n=1 Tax=Populus trichocarpa R...    97   1e-18
UniRef100_Q0DJV3 Os05g0224700 protein n=1 Tax=Oryza sativa Japon...    77   1e-12
UniRef100_Q6NML5 At4g14520 n=1 Tax=Arabidopsis thaliana RepID=Q6...    73   2e-11
UniRef100_O23308 Putative uncharacterized protein AT4g14520 n=1 ...    73   2e-11
UniRef100_C5MEG1 DNA-directed RNA polymerase II 19 kDa polypepti...    59   3e-07
UniRef100_Q6ATY6 Os05g0400700 protein n=2 Tax=Oryza sativa RepID...    58   4e-07
UniRef100_B9GGV6 Predicted protein n=1 Tax=Populus trichocarpa R...    58   6e-07
UniRef100_B7FHG8 Putative uncharacterized protein n=1 Tax=Medica...    58   6e-07
UniRef100_B9S3C9 DNA-directed RNA polymerase II 19 kD polypeptid...    57   7e-07
UniRef100_A5C1N5 Chromosome chr6 scaffold_3, whole genome shotgu...    57   7e-07
UniRef100_P46279 DNA-directed RNA polymerase II subunit RPB7 n=2...    57   7e-07
UniRef100_B4G147 DNA-directed RNA polymerase II 19 kDa polypepti...    57   1e-06
UniRef100_A5DVP2 DNA-directed RNA polymerase II 19 kDa polypepti...    55   3e-06
UniRef100_P38421 DNA-directed RNA polymerase II subunit RPB7 n=2...    55   4e-06
graphical overview:
alignment
UniRef100_B7FLW9 UniRef100_B7FLW9 UniRef100_C6T5N3 UniRef100_C6T5N3 UniRef100_B9S9D8 UniRef100_B9S9D8 UniRef100_B9HUM9 UniRef100_B9HUM9 UniRef100_B9HKE3 UniRef100_B9HKE3 UniRef100_A7NX05 UniRef100_A7NX05 UniRef100_O23322 UniRef100_O23322 UniRef100_A6QRA1 UniRef100_A6QRA1 UniRef100_Q9LIK8 UniRef100_Q9LIK8 UniRef100_Q8LE42 UniRef100_Q8LE42 UniRef100_B8AZD0 UniRef100_B8AZD0 UniRef100_Q75M02 UniRef100_Q75M02 UniRef100_C5Z0L3 UniRef100_C5Z0L3 UniRef100_B4FXC7 UniRef100_B4FXC7 UniRef100_Q75KS7 UniRef100_Q75KS7 UniRef100_B9FN64 UniRef100_B9FN64 UniRef100_B9HUM8 UniRef100_B9HUM8 UniRef100_Q0DJV3 UniRef100_Q0DJV3 UniRef100_Q6NML5 UniRef100_Q6NML5 UniRef100_O23308 UniRef100_O23308 UniRef100_C5MEG1 UniRef100_C5MEG1 UniRef100_Q6ATY6 UniRef100_Q6ATY6 UniRef100_B9GGV6 UniRef100_B9GGV6 UniRef100_B7FHG8 UniRef100_B7FHG8 UniRef100_B9S3C9 UniRef100_B9S3C9 UniRef100_A5C1N5 UniRef100_A5C1N5 UniRef100_P46279 UniRef100_P46279 UniRef100_B4G147 UniRef100_B4G147 UniRef100_A5DVP2 UniRef100_A5DVP2