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[1][TOP] >UniRef100_B9I6T5 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I6T5_POPTR Length = 499 Score = 110 bits (274), Expect(2) = 3e-34 Identities = 48/66 (72%), Positives = 59/66 (89%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T+H+++AD + EN PW GVDEWALKEEVNKLI+ L EREREI+RLY+GLDK+CLTW Sbjct: 399 PGETHHSYIADNRLENNPWHGVDEWALKEEVNKLIDSALQEREREIIRLYHGLDKECLTW 458 Query: 381 EEISKR 364 E+ISKR Sbjct: 459 EDISKR 464 Score = 59.7 bits (143), Expect(2) = 3e-34 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQVGLVALEKLKHAARK +LEAML +H Sbjct: 466 GLSRERVRQVGLVALEKLKHAARKGKLEAMLVKH 499 [2][TOP] >UniRef100_B9IPY1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IPY1_POPTR Length = 509 Score = 109 bits (273), Expect(2) = 6e-34 Identities = 47/66 (71%), Positives = 60/66 (90%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T+H+++AD + EN PW GVDEWALKEEVNKLI+ TL ERE+EI+RLY+GLD++CLTW Sbjct: 409 PGETHHSYIADNRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTW 468 Query: 381 EEISKR 364 E+ISKR Sbjct: 469 EDISKR 474 Score = 58.9 bits (141), Expect(2) = 6e-34 Identities = 29/34 (85%), Positives = 31/34 (91%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQVGLVALEKLKHAARK+ EAML +H Sbjct: 476 GLSRERVRQVGLVALEKLKHAARKRNTEAMLVKH 509 [3][TOP] >UniRef100_B9SDF8 RNA polymerase sigma factor rpoD, putative n=1 Tax=Ricinus communis RepID=B9SDF8_RICCO Length = 508 Score = 105 bits (263), Expect(2) = 7e-34 Identities = 46/66 (69%), Positives = 58/66 (87%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T+H+++AD EN PW GVD+WALK+EVNKLIN+TL ERE+EI+RLYYGLD + LTW Sbjct: 408 PGETHHSYIADNCLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTW 467 Query: 381 EEISKR 364 E+ISKR Sbjct: 468 EDISKR 473 Score = 62.4 bits (150), Expect(2) = 7e-34 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQVGLVALEKLKHAARKK+LEAML +H Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKLEAMLVKH 508 [4][TOP] >UniRef100_Q9SLX3 Sigma factor n=1 Tax=Nicotiana tabacum RepID=Q9SLX3_TOBAC Length = 502 Score = 107 bits (267), Expect(2) = 2e-33 Identities = 47/66 (71%), Positives = 57/66 (86%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T H+++AD + ENIPW GVDEW LK+EVN LI+ TL EREREIVRLYYGLD +CLTW Sbjct: 402 PGETLHSYIADNRLENIPWHGVDEWMLKDEVNNLISSTLREREREIVRLYYGLDNECLTW 461 Query: 381 EEISKR 364 E+IS+R Sbjct: 462 EDISRR 467 Score = 59.7 bits (143), Expect(2) = 2e-33 Identities = 29/34 (85%), Positives = 32/34 (94%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQVGLVALEKLKHAARK+ L+AML +H Sbjct: 469 GLSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 502 [5][TOP] >UniRef100_UPI0001984E99 PREDICTED: hypothetical protein isoform 1 n=1 Tax=Vitis vinifera RepID=UPI0001984E99 Length = 507 Score = 110 bits (274), Expect(2) = 2e-32 Identities = 48/66 (72%), Positives = 58/66 (87%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T H+++AD + EN PW GVDEWALK+EVNKLIN TL ERER+I+RLYYGLD +CLTW Sbjct: 407 PGETLHSYIADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTW 466 Query: 381 EEISKR 364 E+ISKR Sbjct: 467 EDISKR 472 Score = 53.5 bits (127), Expect(2) = 2e-32 Identities = 27/34 (79%), Positives = 31/34 (91%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQVGLVALEKLK+AARK +EAML ++ Sbjct: 474 GLSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 507 [6][TOP] >UniRef100_UPI0001984E9A PREDICTED: hypothetical protein isoform 2 n=1 Tax=Vitis vinifera RepID=UPI0001984E9A Length = 496 Score = 110 bits (274), Expect(2) = 2e-32 Identities = 48/66 (72%), Positives = 58/66 (87%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T H+++AD + EN PW GVDEWALK+EVNKLIN TL ERER+I+RLYYGLD +CLTW Sbjct: 396 PGETLHSYIADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTW 455 Query: 381 EEISKR 364 E+ISKR Sbjct: 456 EDISKR 461 Score = 53.5 bits (127), Expect(2) = 2e-32 Identities = 27/34 (79%), Positives = 31/34 (91%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQVGLVALEKLK+AARK +EAML ++ Sbjct: 463 GLSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 496 [7][TOP] >UniRef100_A7PAZ2 Chromosome chr16 scaffold_10, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7PAZ2_VITVI Length = 486 Score = 110 bits (274), Expect(2) = 2e-32 Identities = 48/66 (72%), Positives = 58/66 (87%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T H+++AD + EN PW GVDEWALK+EVNKLIN TL ERER+I+RLYYGLD +CLTW Sbjct: 386 PGETLHSYIADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTW 445 Query: 381 EEISKR 364 E+ISKR Sbjct: 446 EDISKR 451 Score = 53.5 bits (127), Expect(2) = 2e-32 Identities = 27/34 (79%), Positives = 31/34 (91%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQVGLVALEKLK+AARK +EAML ++ Sbjct: 453 GLSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 486 [8][TOP] >UniRef100_Q9SLX4 Sigma factor n=1 Tax=Nicotiana tabacum RepID=Q9SLX4_TOBAC Length = 508 Score = 103 bits (256), Expect(2) = 1e-31 Identities = 45/66 (68%), Positives = 55/66 (83%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T H+++AD EN PW GVD WALK+EVN LI+ TL +REREI+RLYYGLD +CLTW Sbjct: 408 PGETLHSYIADNHLENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTW 467 Query: 381 EEISKR 364 E+ISKR Sbjct: 468 EDISKR 473 Score = 57.8 bits (138), Expect(2) = 1e-31 Identities = 28/33 (84%), Positives = 32/33 (96%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFE 267 GLSRERVRQVGLVALEKLKHAARK++L+AML + Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKRQLDAMLIK 507 [9][TOP] >UniRef100_Q9FPH1 At1g64860 n=1 Tax=Arabidopsis thaliana RepID=Q9FPH1_ARATH Length = 502 Score = 102 bits (255), Expect(2) = 2e-31 Identities = 45/66 (68%), Positives = 58/66 (87%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T+H+++AD + EN PW G D+ ALKEEV+KLI+ TL ERE+EI+RLYYGLDK+CLTW Sbjct: 402 PGETHHSYIADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTW 461 Query: 381 EEISKR 364 E+ISKR Sbjct: 462 EDISKR 467 Score = 57.4 bits (137), Expect(2) = 2e-31 Identities = 27/34 (79%), Positives = 33/34 (97%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQVGLVALEKLKHAARK+++EAM+ ++ Sbjct: 469 GLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502 [10][TOP] >UniRef100_O24629 AT1G64860 protein n=2 Tax=Arabidopsis thaliana RepID=O24629_ARATH Length = 502 Score = 102 bits (255), Expect(2) = 2e-31 Identities = 45/66 (68%), Positives = 58/66 (87%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T+H+++AD + EN PW G D+ ALKEEV+KLI+ TL ERE+EI+RLYYGLDK+CLTW Sbjct: 402 PGETHHSYIADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTW 461 Query: 381 EEISKR 364 E+ISKR Sbjct: 462 EDISKR 467 Score = 57.4 bits (137), Expect(2) = 2e-31 Identities = 27/34 (79%), Positives = 33/34 (97%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQVGLVALEKLKHAARK+++EAM+ ++ Sbjct: 469 GLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502 [11][TOP] >UniRef100_O22576 RNA polymerase sigma subunit 1 n=1 Tax=Arabidopsis thaliana RepID=O22576_ARATH Length = 502 Score = 102 bits (255), Expect(2) = 2e-31 Identities = 45/66 (68%), Positives = 58/66 (87%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T+H+++AD + EN PW G D+ ALKEEV+KLI+ TL ERE+EI+RLYYGLDK+CLTW Sbjct: 402 PGETHHSYIADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTW 461 Query: 381 EEISKR 364 E+ISKR Sbjct: 462 EDISKR 467 Score = 57.4 bits (137), Expect(2) = 2e-31 Identities = 27/34 (79%), Positives = 33/34 (97%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQVGLVALEKLKHAARK+++EAM+ ++ Sbjct: 469 GLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502 [12][TOP] >UniRef100_O22057 Plastid RNA polymerase sigma-subunit n=1 Tax=Arabidopsis thaliana RepID=O22057_ARATH Length = 502 Score = 102 bits (255), Expect(2) = 2e-31 Identities = 45/66 (68%), Positives = 58/66 (87%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T+H+++AD + EN PW G D+ ALKEEV+KLI+ TL ERE+EI+RLYYGLDK+CLTW Sbjct: 402 PGETHHSYIADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTW 461 Query: 381 EEISKR 364 E+ISKR Sbjct: 462 EDISKR 467 Score = 57.4 bits (137), Expect(2) = 2e-31 Identities = 27/34 (79%), Positives = 33/34 (97%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQVGLVALEKLKHAARK+++EAM+ ++ Sbjct: 469 GLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502 [13][TOP] >UniRef100_O49935 Sig1 protein n=1 Tax=Sinapis alba RepID=O49935_SINAL Length = 481 Score = 102 bits (253), Expect(2) = 3e-31 Identities = 45/66 (68%), Positives = 58/66 (87%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T+H+++AD + EN PW G D ALK+EV+KLI+VTL EREREI+RLYYGLDK+CLTW Sbjct: 381 PGETHHSYIADNRLENNPWHGYDALALKDEVSKLISVTLGEREREIIRLYYGLDKECLTW 440 Query: 381 EEISKR 364 E+IS+R Sbjct: 441 EDISQR 446 Score = 57.4 bits (137), Expect(2) = 3e-31 Identities = 27/34 (79%), Positives = 33/34 (97%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQVGLVALEKLKHAARK+++EAM+ ++ Sbjct: 448 GLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 481 [14][TOP] >UniRef100_O24348 Plastid RNA polymerase sigma factor n=1 Tax=Sorghum bicolor RepID=O24348_SORBI Length = 500 Score = 87.0 bits (214), Expect(2) = 2e-26 Identities = 38/67 (56%), Positives = 51/67 (76%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PGDT H+++ D+ N PW G +E LKEEVN LIN L ERER+I+RLY+G+ K+C TW Sbjct: 400 PGDTLHSYIEDQNVANDPWHGFEERYLKEEVNNLINSNLNERERDIIRLYHGIGKQCHTW 459 Query: 381 EEISKRF 361 E+IS++F Sbjct: 460 EDISRQF 466 Score = 56.2 bits (134), Expect(2) = 2e-26 Identities = 27/34 (79%), Positives = 32/34 (94%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQVGLVA+EKLKHAAR+K L+A+L E+ Sbjct: 467 GLSRERVRQVGLVAMEKLKHAARRKHLDALLEEY 500 [15][TOP] >UniRef100_Q9ZP70 Chloroplast sigma factor (Fragment) n=1 Tax=Triticum aestivum RepID=Q9ZP70_WHEAT Length = 461 Score = 93.2 bits (230), Expect(2) = 2e-26 Identities = 38/67 (56%), Positives = 53/67 (79%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PGDT H+++ D+ N PW G +EW LKEEVNKL+N L ERER+I++LY+G+ K+C TW Sbjct: 361 PGDTLHSYIEDQNVANDPWHGFEEWYLKEEVNKLLNSNLTERERDIIQLYHGIGKQCHTW 420 Query: 381 EEISKRF 361 E+IS++F Sbjct: 421 EDISRQF 427 Score = 50.1 bits (118), Expect(2) = 2e-26 Identities = 23/34 (67%), Positives = 31/34 (91%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQVGL+A+EKLK AR+K+L+A+L ++ Sbjct: 428 GLSRERVRQVGLIAMEKLKQRARRKKLDALLQDY 461 [16][TOP] >UniRef100_Q9ZTI2 RNA polymerase sigma factor 2 (Fragment) n=1 Tax=Zea mays RepID=Q9ZTI2_MAIZE Length = 349 Score = 87.8 bits (216), Expect(2) = 4e-25 Identities = 38/67 (56%), Positives = 51/67 (76%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PGDT H+++ D+ N PW G +E LKEEVN LIN L ERER+I+RLY+G+ K+C TW Sbjct: 249 PGDTLHSYIEDQNVANDPWHGFEEMYLKEEVNNLINSNLNERERDIIRLYHGIGKQCHTW 308 Query: 381 EEISKRF 361 E+IS++F Sbjct: 309 EDISRQF 315 Score = 51.2 bits (121), Expect(2) = 4e-25 Identities = 25/34 (73%), Positives = 30/34 (88%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264 GLSRERVRQV LVA+EKLKHAAR+K L A+L ++ Sbjct: 316 GLSRERVRQVRLVAMEKLKHAARRKHLNALLEDY 349 [17][TOP] >UniRef100_Q7EY08 Putative plastid RNA polymerase sigma factor n=2 Tax=Oryza sativa Japonica Group RepID=Q7EY08_ORYSJ Length = 388 Score = 94.0 bits (232), Expect = 7e-18 Identities = 39/67 (58%), Positives = 54/67 (80%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T H+++ D+ N PW G +EW LKEEVNKL+N TL ERER+I+RLY+G+ K+C TW Sbjct: 288 PGETLHSYIEDQNVANDPWHGFEEWYLKEEVNKLLNSTLNERERDIIRLYHGIGKQCHTW 347 Query: 381 EEISKRF 361 E+IS++F Sbjct: 348 EDISRQF 354 Score = 56.6 bits (135), Expect = 1e-06 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 3/70 (4%) Frame = -3 Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294 N L+ NERE+ + + I + ++ GLSRERVRQVGL+A+EKLKHAAR+ Sbjct: 319 NKLLNSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLIAMEKLKHAARR 378 Query: 293 KELEAMLFEH 264 K LEA+L ++ Sbjct: 379 KNLEALLEDY 388 [18][TOP] >UniRef100_Q0J7T6 Os08g0163400 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0J7T6_ORYSJ Length = 520 Score = 94.0 bits (232), Expect = 7e-18 Identities = 39/67 (58%), Positives = 54/67 (80%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T H+++ D+ N PW G +EW LKEEVNKL+N TL ERER+I+RLY+G+ K+C TW Sbjct: 420 PGETLHSYIEDQNVANDPWHGFEEWYLKEEVNKLLNSTLNERERDIIRLYHGIGKQCHTW 479 Query: 381 EEISKRF 361 E+IS++F Sbjct: 480 EDISRQF 486 Score = 56.6 bits (135), Expect = 1e-06 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 3/70 (4%) Frame = -3 Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294 N L+ NERE+ + + I + ++ GLSRERVRQVGL+A+EKLKHAAR+ Sbjct: 451 NKLLNSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLIAMEKLKHAARR 510 Query: 293 KELEAMLFEH 264 K LEA+L ++ Sbjct: 511 KNLEALLEDY 520 [19][TOP] >UniRef100_O48655 Plastid RNA polymerase sigma factor n=1 Tax=Oryza sativa Japonica Group RepID=O48655_ORYSJ Length = 519 Score = 94.0 bits (232), Expect = 7e-18 Identities = 39/67 (58%), Positives = 54/67 (80%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T H+++ D+ N PW G +EW LKEEVNKL+N TL ERER+I+RLY+G+ K+C TW Sbjct: 419 PGETLHSYIEDQNVANDPWHGFEEWYLKEEVNKLLNSTLNERERDIIRLYHGIGKQCHTW 478 Query: 381 EEISKRF 361 E+IS++F Sbjct: 479 EDISRQF 485 Score = 56.6 bits (135), Expect = 1e-06 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 3/70 (4%) Frame = -3 Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294 N L+ NERE+ + + I + ++ GLSRERVRQVGL+A+EKLKHAAR+ Sbjct: 450 NKLLNSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLIAMEKLKHAARR 509 Query: 293 KELEAMLFEH 264 K LEA+L ++ Sbjct: 510 KNLEALLEDY 519 [20][TOP] >UniRef100_A3BPX7 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=A3BPX7_ORYSJ Length = 420 Score = 94.0 bits (232), Expect = 7e-18 Identities = 39/67 (58%), Positives = 54/67 (80%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T H+++ D+ N PW G +EW LKEEVNKL+N TL ERER+I+RLY+G+ K+C TW Sbjct: 320 PGETLHSYIEDQNVANDPWHGFEEWYLKEEVNKLLNSTLNERERDIIRLYHGIGKQCHTW 379 Query: 381 EEISKRF 361 E+IS++F Sbjct: 380 EDISRQF 386 Score = 56.6 bits (135), Expect = 1e-06 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 3/70 (4%) Frame = -3 Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294 N L+ NERE+ + + I + ++ GLSRERVRQVGL+A+EKLKHAAR+ Sbjct: 351 NKLLNSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLIAMEKLKHAARR 410 Query: 293 KELEAMLFEH 264 K LEA+L ++ Sbjct: 411 KNLEALLEDY 420 [21][TOP] >UniRef100_Q7EY07 Putative plastid RNA polymerase sigma factor n=2 Tax=Oryza sativa RepID=Q7EY07_ORYSJ Length = 342 Score = 94.0 bits (232), Expect = 7e-18 Identities = 39/67 (58%), Positives = 54/67 (80%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PG+T H+++ D+ N PW G +EW LKEEVNKL+N TL ERER+I+RLY+G+ K+C TW Sbjct: 242 PGETLHSYIEDQNVANDPWHGFEEWYLKEEVNKLLNSTLNERERDIIRLYHGIGKQCHTW 301 Query: 381 EEISKRF 361 E+IS++F Sbjct: 302 EDISRQF 308 Score = 56.6 bits (135), Expect = 1e-06 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 3/70 (4%) Frame = -3 Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294 N L+ NERE+ + + I + ++ GLSRERVRQVGL+A+EKLKHAAR+ Sbjct: 273 NKLLNSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLIAMEKLKHAARR 332 Query: 293 KELEAMLFEH 264 K LEA+L ++ Sbjct: 333 KNLEALLEDY 342 [22][TOP] >UniRef100_Q9ZTI3 RNA polymerase sigma factor 1 (Fragment) n=1 Tax=Zea mays RepID=Q9ZTI3_MAIZE Length = 398 Score = 89.0 bits (219), Expect = 2e-16 Identities = 39/67 (58%), Positives = 52/67 (77%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PGDT H+++ D+ N PW G +E LKEEVN LIN TL ERER+I+RLY+G+ K+C TW Sbjct: 298 PGDTLHSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTW 357 Query: 381 EEISKRF 361 E+IS++F Sbjct: 358 EDISRQF 364 Score = 56.6 bits (135), Expect = 1e-06 Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 3/70 (4%) Frame = -3 Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294 NSL+ NERE+ + + I + ++ GLSRERVRQVGLVA+EKLKHAAR+ Sbjct: 329 NSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKLKHAARR 388 Query: 293 KELEAMLFEH 264 + L+A+L E+ Sbjct: 389 EHLDALLEEY 398 [23][TOP] >UniRef100_C5YHG2 Putative uncharacterized protein Sb07g004340 n=1 Tax=Sorghum bicolor RepID=C5YHG2_SORBI Length = 500 Score = 89.0 bits (219), Expect = 2e-16 Identities = 39/67 (58%), Positives = 52/67 (77%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PGDT H+++ D+ N PW G +E LKEEVN LIN TL ERER+I+RLY+G+ K+C TW Sbjct: 400 PGDTLHSYIEDQNVANDPWHGFEERYLKEEVNNLINSTLNERERDIIRLYHGIGKQCHTW 459 Query: 381 EEISKRF 361 E+IS++F Sbjct: 460 EDISRQF 466 Score = 57.0 bits (136), Expect = 9e-07 Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 3/70 (4%) Frame = -3 Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294 N+L+ NERE+ + + I + ++ GLSRERVRQVGLVA+EKLKHAAR+ Sbjct: 431 NNLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKLKHAARR 490 Query: 293 KELEAMLFEH 264 K L+A+L E+ Sbjct: 491 KHLDALLEEY 500 [24][TOP] >UniRef100_B4FP19 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B4FP19_MAIZE Length = 496 Score = 89.0 bits (219), Expect = 2e-16 Identities = 39/67 (58%), Positives = 52/67 (77%) Frame = -2 Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382 PGDT H+++ D+ N PW G +E LKEEVN LIN TL ERER+I+RLY+G+ K+C TW Sbjct: 396 PGDTLHSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTW 455 Query: 381 EEISKRF 361 E+IS++F Sbjct: 456 EDISRQF 462 Score = 56.6 bits (135), Expect = 1e-06 Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 3/70 (4%) Frame = -3 Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294 NSL+ NERE+ + + I + ++ GLSRERVRQVGLVA+EKLKHAAR+ Sbjct: 427 NSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKLKHAARR 486 Query: 293 KELEAMLFEH 264 + L+A+L E+ Sbjct: 487 EHLDALLEEY 496 [25][TOP] >UniRef100_A9SW01 Plastid sigma factor SIG1 n=2 Tax=Physcomitrella patens RepID=A9SW01_PHYPA Length = 677 Score = 59.7 bits (143), Expect(2) = 2e-10 Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 3/69 (4%) Frame = -2 Query: 558 GDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGL---DKKCL 388 G+T H+ VAD+ EN PW V+ +K++V+KL+ L RER+IVRL+YG+ D + Sbjct: 574 GETLHSLVADRDIENQPWTIVERMLMKDDVDKLLTSQLGPRERDIVRLHYGVGREDGSVM 633 Query: 387 TWEEISKRF 361 + E IS R+ Sbjct: 634 SLESISYRY 642 Score = 29.3 bits (64), Expect(2) = 2e-10 Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = -3 Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAML 273 G+SRERVRQ+ A+ KL+ +R++ L+ L Sbjct: 643 GVSRERVRQLETAAMRKLQIKSREQGLDRYL 673