BB922823 ( RCE30286 )

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[1][TOP]
>UniRef100_B9I6T5 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I6T5_POPTR
          Length = 499

 Score =  110 bits (274), Expect(2) = 3e-34
 Identities = 48/66 (72%), Positives = 59/66 (89%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T+H+++AD + EN PW GVDEWALKEEVNKLI+  L EREREI+RLY+GLDK+CLTW
Sbjct: 399 PGETHHSYIADNRLENNPWHGVDEWALKEEVNKLIDSALQEREREIIRLYHGLDKECLTW 458

Query: 381 EEISKR 364
           E+ISKR
Sbjct: 459 EDISKR 464

 Score = 59.7 bits (143), Expect(2) = 3e-34
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQVGLVALEKLKHAARK +LEAML +H
Sbjct: 466 GLSRERVRQVGLVALEKLKHAARKGKLEAMLVKH 499

[2][TOP]
>UniRef100_B9IPY1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IPY1_POPTR
          Length = 509

 Score =  109 bits (273), Expect(2) = 6e-34
 Identities = 47/66 (71%), Positives = 60/66 (90%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T+H+++AD + EN PW GVDEWALKEEVNKLI+ TL ERE+EI+RLY+GLD++CLTW
Sbjct: 409 PGETHHSYIADNRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTW 468

Query: 381 EEISKR 364
           E+ISKR
Sbjct: 469 EDISKR 474

 Score = 58.9 bits (141), Expect(2) = 6e-34
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQVGLVALEKLKHAARK+  EAML +H
Sbjct: 476 GLSRERVRQVGLVALEKLKHAARKRNTEAMLVKH 509

[3][TOP]
>UniRef100_B9SDF8 RNA polymerase sigma factor rpoD, putative n=1 Tax=Ricinus communis
           RepID=B9SDF8_RICCO
          Length = 508

 Score =  105 bits (263), Expect(2) = 7e-34
 Identities = 46/66 (69%), Positives = 58/66 (87%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T+H+++AD   EN PW GVD+WALK+EVNKLIN+TL ERE+EI+RLYYGLD + LTW
Sbjct: 408 PGETHHSYIADNCLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTW 467

Query: 381 EEISKR 364
           E+ISKR
Sbjct: 468 EDISKR 473

 Score = 62.4 bits (150), Expect(2) = 7e-34
 Identities = 31/34 (91%), Positives = 33/34 (97%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQVGLVALEKLKHAARKK+LEAML +H
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKLEAMLVKH 508

[4][TOP]
>UniRef100_Q9SLX3 Sigma factor n=1 Tax=Nicotiana tabacum RepID=Q9SLX3_TOBAC
          Length = 502

 Score =  107 bits (267), Expect(2) = 2e-33
 Identities = 47/66 (71%), Positives = 57/66 (86%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T H+++AD + ENIPW GVDEW LK+EVN LI+ TL EREREIVRLYYGLD +CLTW
Sbjct: 402 PGETLHSYIADNRLENIPWHGVDEWMLKDEVNNLISSTLREREREIVRLYYGLDNECLTW 461

Query: 381 EEISKR 364
           E+IS+R
Sbjct: 462 EDISRR 467

 Score = 59.7 bits (143), Expect(2) = 2e-33
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQVGLVALEKLKHAARK+ L+AML +H
Sbjct: 469 GLSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 502

[5][TOP]
>UniRef100_UPI0001984E99 PREDICTED: hypothetical protein isoform 1 n=1 Tax=Vitis vinifera
           RepID=UPI0001984E99
          Length = 507

 Score =  110 bits (274), Expect(2) = 2e-32
 Identities = 48/66 (72%), Positives = 58/66 (87%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T H+++AD + EN PW GVDEWALK+EVNKLIN TL ERER+I+RLYYGLD +CLTW
Sbjct: 407 PGETLHSYIADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTW 466

Query: 381 EEISKR 364
           E+ISKR
Sbjct: 467 EDISKR 472

 Score = 53.5 bits (127), Expect(2) = 2e-32
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQVGLVALEKLK+AARK  +EAML ++
Sbjct: 474 GLSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 507

[6][TOP]
>UniRef100_UPI0001984E9A PREDICTED: hypothetical protein isoform 2 n=1 Tax=Vitis vinifera
           RepID=UPI0001984E9A
          Length = 496

 Score =  110 bits (274), Expect(2) = 2e-32
 Identities = 48/66 (72%), Positives = 58/66 (87%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T H+++AD + EN PW GVDEWALK+EVNKLIN TL ERER+I+RLYYGLD +CLTW
Sbjct: 396 PGETLHSYIADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTW 455

Query: 381 EEISKR 364
           E+ISKR
Sbjct: 456 EDISKR 461

 Score = 53.5 bits (127), Expect(2) = 2e-32
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQVGLVALEKLK+AARK  +EAML ++
Sbjct: 463 GLSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 496

[7][TOP]
>UniRef100_A7PAZ2 Chromosome chr16 scaffold_10, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7PAZ2_VITVI
          Length = 486

 Score =  110 bits (274), Expect(2) = 2e-32
 Identities = 48/66 (72%), Positives = 58/66 (87%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T H+++AD + EN PW GVDEWALK+EVNKLIN TL ERER+I+RLYYGLD +CLTW
Sbjct: 386 PGETLHSYIADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTW 445

Query: 381 EEISKR 364
           E+ISKR
Sbjct: 446 EDISKR 451

 Score = 53.5 bits (127), Expect(2) = 2e-32
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQVGLVALEKLK+AARK  +EAML ++
Sbjct: 453 GLSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 486

[8][TOP]
>UniRef100_Q9SLX4 Sigma factor n=1 Tax=Nicotiana tabacum RepID=Q9SLX4_TOBAC
          Length = 508

 Score =  103 bits (256), Expect(2) = 1e-31
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T H+++AD   EN PW GVD WALK+EVN LI+ TL +REREI+RLYYGLD +CLTW
Sbjct: 408 PGETLHSYIADNHLENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTW 467

Query: 381 EEISKR 364
           E+ISKR
Sbjct: 468 EDISKR 473

 Score = 57.8 bits (138), Expect(2) = 1e-31
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFE 267
           GLSRERVRQVGLVALEKLKHAARK++L+AML +
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKRQLDAMLIK 507

[9][TOP]
>UniRef100_Q9FPH1 At1g64860 n=1 Tax=Arabidopsis thaliana RepID=Q9FPH1_ARATH
          Length = 502

 Score =  102 bits (255), Expect(2) = 2e-31
 Identities = 45/66 (68%), Positives = 58/66 (87%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T+H+++AD + EN PW G D+ ALKEEV+KLI+ TL ERE+EI+RLYYGLDK+CLTW
Sbjct: 402 PGETHHSYIADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTW 461

Query: 381 EEISKR 364
           E+ISKR
Sbjct: 462 EDISKR 467

 Score = 57.4 bits (137), Expect(2) = 2e-31
 Identities = 27/34 (79%), Positives = 33/34 (97%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQVGLVALEKLKHAARK+++EAM+ ++
Sbjct: 469 GLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502

[10][TOP]
>UniRef100_O24629 AT1G64860 protein n=2 Tax=Arabidopsis thaliana RepID=O24629_ARATH
          Length = 502

 Score =  102 bits (255), Expect(2) = 2e-31
 Identities = 45/66 (68%), Positives = 58/66 (87%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T+H+++AD + EN PW G D+ ALKEEV+KLI+ TL ERE+EI+RLYYGLDK+CLTW
Sbjct: 402 PGETHHSYIADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTW 461

Query: 381 EEISKR 364
           E+ISKR
Sbjct: 462 EDISKR 467

 Score = 57.4 bits (137), Expect(2) = 2e-31
 Identities = 27/34 (79%), Positives = 33/34 (97%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQVGLVALEKLKHAARK+++EAM+ ++
Sbjct: 469 GLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502

[11][TOP]
>UniRef100_O22576 RNA polymerase sigma subunit 1 n=1 Tax=Arabidopsis thaliana
           RepID=O22576_ARATH
          Length = 502

 Score =  102 bits (255), Expect(2) = 2e-31
 Identities = 45/66 (68%), Positives = 58/66 (87%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T+H+++AD + EN PW G D+ ALKEEV+KLI+ TL ERE+EI+RLYYGLDK+CLTW
Sbjct: 402 PGETHHSYIADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTW 461

Query: 381 EEISKR 364
           E+ISKR
Sbjct: 462 EDISKR 467

 Score = 57.4 bits (137), Expect(2) = 2e-31
 Identities = 27/34 (79%), Positives = 33/34 (97%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQVGLVALEKLKHAARK+++EAM+ ++
Sbjct: 469 GLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502

[12][TOP]
>UniRef100_O22057 Plastid RNA polymerase sigma-subunit n=1 Tax=Arabidopsis thaliana
           RepID=O22057_ARATH
          Length = 502

 Score =  102 bits (255), Expect(2) = 2e-31
 Identities = 45/66 (68%), Positives = 58/66 (87%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T+H+++AD + EN PW G D+ ALKEEV+KLI+ TL ERE+EI+RLYYGLDK+CLTW
Sbjct: 402 PGETHHSYIADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTW 461

Query: 381 EEISKR 364
           E+ISKR
Sbjct: 462 EDISKR 467

 Score = 57.4 bits (137), Expect(2) = 2e-31
 Identities = 27/34 (79%), Positives = 33/34 (97%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQVGLVALEKLKHAARK+++EAM+ ++
Sbjct: 469 GLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502

[13][TOP]
>UniRef100_O49935 Sig1 protein n=1 Tax=Sinapis alba RepID=O49935_SINAL
          Length = 481

 Score =  102 bits (253), Expect(2) = 3e-31
 Identities = 45/66 (68%), Positives = 58/66 (87%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T+H+++AD + EN PW G D  ALK+EV+KLI+VTL EREREI+RLYYGLDK+CLTW
Sbjct: 381 PGETHHSYIADNRLENNPWHGYDALALKDEVSKLISVTLGEREREIIRLYYGLDKECLTW 440

Query: 381 EEISKR 364
           E+IS+R
Sbjct: 441 EDISQR 446

 Score = 57.4 bits (137), Expect(2) = 3e-31
 Identities = 27/34 (79%), Positives = 33/34 (97%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQVGLVALEKLKHAARK+++EAM+ ++
Sbjct: 448 GLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 481

[14][TOP]
>UniRef100_O24348 Plastid RNA polymerase sigma factor n=1 Tax=Sorghum bicolor
           RepID=O24348_SORBI
          Length = 500

 Score = 87.0 bits (214), Expect(2) = 2e-26
 Identities = 38/67 (56%), Positives = 51/67 (76%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PGDT H+++ D+   N PW G +E  LKEEVN LIN  L ERER+I+RLY+G+ K+C TW
Sbjct: 400 PGDTLHSYIEDQNVANDPWHGFEERYLKEEVNNLINSNLNERERDIIRLYHGIGKQCHTW 459

Query: 381 EEISKRF 361
           E+IS++F
Sbjct: 460 EDISRQF 466

 Score = 56.2 bits (134), Expect(2) = 2e-26
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQVGLVA+EKLKHAAR+K L+A+L E+
Sbjct: 467 GLSRERVRQVGLVAMEKLKHAARRKHLDALLEEY 500

[15][TOP]
>UniRef100_Q9ZP70 Chloroplast sigma factor (Fragment) n=1 Tax=Triticum aestivum
           RepID=Q9ZP70_WHEAT
          Length = 461

 Score = 93.2 bits (230), Expect(2) = 2e-26
 Identities = 38/67 (56%), Positives = 53/67 (79%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PGDT H+++ D+   N PW G +EW LKEEVNKL+N  L ERER+I++LY+G+ K+C TW
Sbjct: 361 PGDTLHSYIEDQNVANDPWHGFEEWYLKEEVNKLLNSNLTERERDIIQLYHGIGKQCHTW 420

Query: 381 EEISKRF 361
           E+IS++F
Sbjct: 421 EDISRQF 427

 Score = 50.1 bits (118), Expect(2) = 2e-26
 Identities = 23/34 (67%), Positives = 31/34 (91%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQVGL+A+EKLK  AR+K+L+A+L ++
Sbjct: 428 GLSRERVRQVGLIAMEKLKQRARRKKLDALLQDY 461

[16][TOP]
>UniRef100_Q9ZTI2 RNA polymerase sigma factor 2 (Fragment) n=1 Tax=Zea mays
           RepID=Q9ZTI2_MAIZE
          Length = 349

 Score = 87.8 bits (216), Expect(2) = 4e-25
 Identities = 38/67 (56%), Positives = 51/67 (76%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PGDT H+++ D+   N PW G +E  LKEEVN LIN  L ERER+I+RLY+G+ K+C TW
Sbjct: 249 PGDTLHSYIEDQNVANDPWHGFEEMYLKEEVNNLINSNLNERERDIIRLYHGIGKQCHTW 308

Query: 381 EEISKRF 361
           E+IS++F
Sbjct: 309 EDISRQF 315

 Score = 51.2 bits (121), Expect(2) = 4e-25
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAMLFEH 264
           GLSRERVRQV LVA+EKLKHAAR+K L A+L ++
Sbjct: 316 GLSRERVRQVRLVAMEKLKHAARRKHLNALLEDY 349

[17][TOP]
>UniRef100_Q7EY08 Putative plastid RNA polymerase sigma factor n=2 Tax=Oryza sativa
           Japonica Group RepID=Q7EY08_ORYSJ
          Length = 388

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 39/67 (58%), Positives = 54/67 (80%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T H+++ D+   N PW G +EW LKEEVNKL+N TL ERER+I+RLY+G+ K+C TW
Sbjct: 288 PGETLHSYIEDQNVANDPWHGFEEWYLKEEVNKLLNSTLNERERDIIRLYHGIGKQCHTW 347

Query: 381 EEISKRF 361
           E+IS++F
Sbjct: 348 EDISRQF 354

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
 Frame = -3

Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294
           N L+    NERE+  + +   I       + ++   GLSRERVRQVGL+A+EKLKHAAR+
Sbjct: 319 NKLLNSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLIAMEKLKHAARR 378

Query: 293 KELEAMLFEH 264
           K LEA+L ++
Sbjct: 379 KNLEALLEDY 388

[18][TOP]
>UniRef100_Q0J7T6 Os08g0163400 protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q0J7T6_ORYSJ
          Length = 520

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 39/67 (58%), Positives = 54/67 (80%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T H+++ D+   N PW G +EW LKEEVNKL+N TL ERER+I+RLY+G+ K+C TW
Sbjct: 420 PGETLHSYIEDQNVANDPWHGFEEWYLKEEVNKLLNSTLNERERDIIRLYHGIGKQCHTW 479

Query: 381 EEISKRF 361
           E+IS++F
Sbjct: 480 EDISRQF 486

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
 Frame = -3

Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294
           N L+    NERE+  + +   I       + ++   GLSRERVRQVGL+A+EKLKHAAR+
Sbjct: 451 NKLLNSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLIAMEKLKHAARR 510

Query: 293 KELEAMLFEH 264
           K LEA+L ++
Sbjct: 511 KNLEALLEDY 520

[19][TOP]
>UniRef100_O48655 Plastid RNA polymerase sigma factor n=1 Tax=Oryza sativa Japonica
           Group RepID=O48655_ORYSJ
          Length = 519

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 39/67 (58%), Positives = 54/67 (80%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T H+++ D+   N PW G +EW LKEEVNKL+N TL ERER+I+RLY+G+ K+C TW
Sbjct: 419 PGETLHSYIEDQNVANDPWHGFEEWYLKEEVNKLLNSTLNERERDIIRLYHGIGKQCHTW 478

Query: 381 EEISKRF 361
           E+IS++F
Sbjct: 479 EDISRQF 485

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
 Frame = -3

Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294
           N L+    NERE+  + +   I       + ++   GLSRERVRQVGL+A+EKLKHAAR+
Sbjct: 450 NKLLNSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLIAMEKLKHAARR 509

Query: 293 KELEAMLFEH 264
           K LEA+L ++
Sbjct: 510 KNLEALLEDY 519

[20][TOP]
>UniRef100_A3BPX7 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
           Group RepID=A3BPX7_ORYSJ
          Length = 420

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 39/67 (58%), Positives = 54/67 (80%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T H+++ D+   N PW G +EW LKEEVNKL+N TL ERER+I+RLY+G+ K+C TW
Sbjct: 320 PGETLHSYIEDQNVANDPWHGFEEWYLKEEVNKLLNSTLNERERDIIRLYHGIGKQCHTW 379

Query: 381 EEISKRF 361
           E+IS++F
Sbjct: 380 EDISRQF 386

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
 Frame = -3

Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294
           N L+    NERE+  + +   I       + ++   GLSRERVRQVGL+A+EKLKHAAR+
Sbjct: 351 NKLLNSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLIAMEKLKHAARR 410

Query: 293 KELEAMLFEH 264
           K LEA+L ++
Sbjct: 411 KNLEALLEDY 420

[21][TOP]
>UniRef100_Q7EY07 Putative plastid RNA polymerase sigma factor n=2 Tax=Oryza sativa
           RepID=Q7EY07_ORYSJ
          Length = 342

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 39/67 (58%), Positives = 54/67 (80%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PG+T H+++ D+   N PW G +EW LKEEVNKL+N TL ERER+I+RLY+G+ K+C TW
Sbjct: 242 PGETLHSYIEDQNVANDPWHGFEEWYLKEEVNKLLNSTLNERERDIIRLYHGIGKQCHTW 301

Query: 381 EEISKRF 361
           E+IS++F
Sbjct: 302 EDISRQF 308

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
 Frame = -3

Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294
           N L+    NERE+  + +   I       + ++   GLSRERVRQVGL+A+EKLKHAAR+
Sbjct: 273 NKLLNSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLIAMEKLKHAARR 332

Query: 293 KELEAMLFEH 264
           K LEA+L ++
Sbjct: 333 KNLEALLEDY 342

[22][TOP]
>UniRef100_Q9ZTI3 RNA polymerase sigma factor 1 (Fragment) n=1 Tax=Zea mays
           RepID=Q9ZTI3_MAIZE
          Length = 398

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 39/67 (58%), Positives = 52/67 (77%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PGDT H+++ D+   N PW G +E  LKEEVN LIN TL ERER+I+RLY+G+ K+C TW
Sbjct: 298 PGDTLHSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTW 357

Query: 381 EEISKRF 361
           E+IS++F
Sbjct: 358 EDISRQF 364

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
 Frame = -3

Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294
           NSL+    NERE+  + +   I       + ++   GLSRERVRQVGLVA+EKLKHAAR+
Sbjct: 329 NSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKLKHAARR 388

Query: 293 KELEAMLFEH 264
           + L+A+L E+
Sbjct: 389 EHLDALLEEY 398

[23][TOP]
>UniRef100_C5YHG2 Putative uncharacterized protein Sb07g004340 n=1 Tax=Sorghum
           bicolor RepID=C5YHG2_SORBI
          Length = 500

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 39/67 (58%), Positives = 52/67 (77%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PGDT H+++ D+   N PW G +E  LKEEVN LIN TL ERER+I+RLY+G+ K+C TW
Sbjct: 400 PGDTLHSYIEDQNVANDPWHGFEERYLKEEVNNLINSTLNERERDIIRLYHGIGKQCHTW 459

Query: 381 EEISKRF 361
           E+IS++F
Sbjct: 460 EDISRQF 466

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
 Frame = -3

Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294
           N+L+    NERE+  + +   I       + ++   GLSRERVRQVGLVA+EKLKHAAR+
Sbjct: 431 NNLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKLKHAARR 490

Query: 293 KELEAMLFEH 264
           K L+A+L E+
Sbjct: 491 KHLDALLEEY 500

[24][TOP]
>UniRef100_B4FP19 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=B4FP19_MAIZE
          Length = 496

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 39/67 (58%), Positives = 52/67 (77%)
 Frame = -2

Query: 561 PGDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGLDKKCLTW 382
           PGDT H+++ D+   N PW G +E  LKEEVN LIN TL ERER+I+RLY+G+ K+C TW
Sbjct: 396 PGDTLHSYIEDQNVANDPWHGFEERYLKEEVNSLINSTLNERERDIIRLYHGIGKQCHTW 455

Query: 381 EEISKRF 361
           E+IS++F
Sbjct: 456 EDISRQF 462

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
 Frame = -3

Query: 464 NSLM*PLSNEREKLFVFIMDWIKNVLRGKKLVN---GLSRERVRQVGLVALEKLKHAARK 294
           NSL+    NERE+  + +   I       + ++   GLSRERVRQVGLVA+EKLKHAAR+
Sbjct: 427 NSLINSTLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVRQVGLVAMEKLKHAARR 486

Query: 293 KELEAMLFEH 264
           + L+A+L E+
Sbjct: 487 EHLDALLEEY 496

[25][TOP]
>UniRef100_A9SW01 Plastid sigma factor SIG1 n=2 Tax=Physcomitrella patens
           RepID=A9SW01_PHYPA
          Length = 677

 Score = 59.7 bits (143), Expect(2) = 2e-10
 Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
 Frame = -2

Query: 558 GDTYHNFVADKQSENIPWIGVDEWALKEEVNKLINVTLVEREREIVRLYYGL---DKKCL 388
           G+T H+ VAD+  EN PW  V+   +K++V+KL+   L  RER+IVRL+YG+   D   +
Sbjct: 574 GETLHSLVADRDIENQPWTIVERMLMKDDVDKLLTSQLGPRERDIVRLHYGVGREDGSVM 633

Query: 387 TWEEISKRF 361
           + E IS R+
Sbjct: 634 SLESISYRY 642

 Score = 29.3 bits (64), Expect(2) = 2e-10
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = -3

Query: 365 GLSRERVRQVGLVALEKLKHAARKKELEAML 273
           G+SRERVRQ+   A+ KL+  +R++ L+  L
Sbjct: 643 GVSRERVRQLETAAMRKLQIKSREQGLDRYL 673