BB922457 ( RCE29744 )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BB922457  RCE29744
         (572 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_B7FLW9 Putative uncharacterized protein n=1 Tax=Medica...   208   3e-52
UniRef100_C6T5N3 Putative uncharacterized protein n=1 Tax=Glycin...   172   1e-41
UniRef100_B9S9D8 DNA-directed RNA polymerase II 19 kD polypeptid...   171   4e-41
UniRef100_B9HUM9 Predicted protein n=2 Tax=Populus trichocarpa R...   166   9e-40
UniRef100_B9HKE3 Predicted protein n=1 Tax=Populus trichocarpa R...   166   2e-39
UniRef100_A7NX05 Chromosome chr5 scaffold_2, whole genome shotgu...   164   4e-39
UniRef100_O23322 RNA polymerase II fifth largest subunit like pr...   158   3e-37
UniRef100_A6QRA1 At4g14660 n=1 Tax=Arabidopsis thaliana RepID=A6...   158   3e-37
UniRef100_Q9LIK8 RNA polymerase II fifth largest subunit-like pr...   125   3e-27
UniRef100_Q8LE42 RNA polymerase II fifth largest subunit-like pr...   125   3e-27
UniRef100_B8AZD0 Putative uncharacterized protein n=1 Tax=Oryza ...   115   2e-24
UniRef100_Q75M02 Os05g0157100 protein n=2 Tax=Oryza sativa RepID...   115   3e-24
UniRef100_C5Z0L3 Putative uncharacterized protein Sb09g004460 n=...   110   1e-22
UniRef100_B4FXC7 DNA-directed RNA polymerase II 19 kDa polypepti...   109   2e-22
UniRef100_Q75KS7 Putative receptor kinase n=1 Tax=Oryza sativa J...   101   5e-20
UniRef100_B9FN64 Putative uncharacterized protein n=1 Tax=Oryza ...   101   5e-20
UniRef100_B9HUM8 Predicted protein n=1 Tax=Populus trichocarpa R...    98   4e-19
UniRef100_Q0DJV3 Os05g0224700 protein n=1 Tax=Oryza sativa Japon...    79   2e-13
UniRef100_Q6NML5 At4g14520 n=1 Tax=Arabidopsis thaliana RepID=Q6...    75   4e-12
UniRef100_O23308 Putative uncharacterized protein AT4g14520 n=1 ...    75   4e-12
UniRef100_Q6ATY6 Os05g0400700 protein n=2 Tax=Oryza sativa RepID...    60   9e-08
UniRef100_C5MEG1 DNA-directed RNA polymerase II 19 kDa polypepti...    60   9e-08
UniRef100_B9GGV6 Predicted protein n=1 Tax=Populus trichocarpa R...    60   1e-07
UniRef100_B7FHG8 Putative uncharacterized protein n=1 Tax=Medica...    60   1e-07
UniRef100_B9S3C9 DNA-directed RNA polymerase II 19 kD polypeptid...    60   2e-07
UniRef100_A5C1N5 Chromosome chr6 scaffold_3, whole genome shotgu...    60   2e-07
UniRef100_P46279 DNA-directed RNA polymerase II subunit RPB7 n=2...    60   2e-07
UniRef100_B4G147 DNA-directed RNA polymerase II 19 kDa polypepti...    59   3e-07
UniRef100_A5DVP2 DNA-directed RNA polymerase II 19 kDa polypepti...    57   8e-07
UniRef100_P38421 DNA-directed RNA polymerase II subunit RPB7 n=2...    57   8e-07
UniRef100_A9TN64 Predicted protein n=1 Tax=Physcomitrella patens...    55   4e-06
UniRef100_B5XFX6 DNA-directed RNA polymerase II subunit RPB7 n=3...    55   5e-06
UniRef100_C3ZQZ0 Putative uncharacterized protein n=1 Tax=Branch...    55   5e-06
UniRef100_UPI00018ACFE3 RNA polymerase II subunit 7 n=1 Tax=Naso...    54   6e-06
UniRef100_UPI0000D560AA PREDICTED: similar to GA16051-PA n=1 Tax...    54   6e-06
UniRef100_Q54P04 DNA-directed RNA polymerase II subunit rpb7 n=1...    54   6e-06
UniRef100_UPI000155F572 PREDICTED: similar to DNA directed RNA p...    54   8e-06
UniRef100_UPI0000E22AEB PREDICTED: similar to RNA polymerase II ...    54   8e-06
UniRef100_UPI00006DFCE0 PREDICTED: similar to polymerase (RNA) I...    54   8e-06
UniRef100_UPI0000EB18F9 DNA-directed RNA polymerase II subunit R...    54   8e-06
UniRef100_C1DYL5 Predicted protein n=1 Tax=Micromonas sp. RCC299...    54   8e-06
UniRef100_Q3ZBW0 Polymerase (RNA) II (DNA directed) polypeptide ...    54   8e-06
UniRef100_C1BND7 DNA-directed RNA polymerase II subunit RPB7 n=1...    54   8e-06
UniRef100_A7SAY0 Predicted protein n=1 Tax=Nematostella vectensi...    54   8e-06
UniRef100_P62487 DNA-directed RNA polymerase II subunit RPB7 n=4...    54   8e-06
graphical overview:
alignment
UniRef100_B7FLW9 UniRef100_B7FLW9 UniRef100_C6T5N3 UniRef100_C6T5N3 UniRef100_B9S9D8 UniRef100_B9S9D8 UniRef100_B9HUM9 UniRef100_B9HUM9 UniRef100_B9HKE3 UniRef100_B9HKE3 UniRef100_A7NX05 UniRef100_A7NX05 UniRef100_O23322 UniRef100_O23322 UniRef100_A6QRA1 UniRef100_A6QRA1 UniRef100_Q9LIK8 UniRef100_Q9LIK8 UniRef100_Q8LE42 UniRef100_Q8LE42 UniRef100_B8AZD0 UniRef100_B8AZD0 UniRef100_Q75M02 UniRef100_Q75M02 UniRef100_C5Z0L3 UniRef100_C5Z0L3 UniRef100_B4FXC7 UniRef100_B4FXC7 UniRef100_Q75KS7 UniRef100_Q75KS7 UniRef100_B9FN64 UniRef100_B9FN64 UniRef100_B9HUM8 UniRef100_B9HUM8 UniRef100_Q0DJV3 UniRef100_Q0DJV3 UniRef100_Q6NML5 UniRef100_Q6NML5 UniRef100_O23308 UniRef100_O23308 UniRef100_Q6ATY6 UniRef100_Q6ATY6 UniRef100_C5MEG1 UniRef100_C5MEG1 UniRef100_B9GGV6 UniRef100_B9GGV6 UniRef100_B7FHG8 UniRef100_B7FHG8 UniRef100_B9S3C9 UniRef100_B9S3C9 UniRef100_A5C1N5 UniRef100_A5C1N5 UniRef100_P46279 UniRef100_P46279 UniRef100_B4G147 UniRef100_B4G147 UniRef100_A5DVP2 UniRef100_A5DVP2 UniRef100_P38421 UniRef100_P38421 UniRef100_A9TN64 UniRef100_A9TN64 UniRef100_B5XFX6 UniRef100_B5XFX6 UniRef100_C3ZQZ0 UniRef100_C3ZQZ0 UniRef100_UPI00018ACFE3 UniRef100_UPI00018ACFE3 UniRef100_UPI0000D560AA UniRef100_UPI0000D560AA UniRef100_Q54P04 UniRef100_Q54P04 UniRef100_UPI000155F572 UniRef100_UPI000155F572 UniRef100_UPI0000E22AEB UniRef100_UPI0000E22AEB UniRef100_UPI00006DFCE0 UniRef100_UPI00006DFCE0 UniRef100_UPI0000EB18F9 UniRef100_UPI0000EB18F9 UniRef100_C1DYL5 UniRef100_C1DYL5 UniRef100_Q3ZBW0 UniRef100_Q3ZBW0 UniRef100_C1BND7 UniRef100_C1BND7 UniRef100_A7SAY0 UniRef100_A7SAY0