[UP]
[1][TOP] >UniRef100_B9N6D9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N6D9_POPTR Length = 254 Score = 283 bits (724), Expect = 7e-75 Identities = 135/187 (72%), Positives = 162/187 (86%) Frame = +2 Query: 14 YLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDT 193 +LFGSLPDKSR CPSC EGTLIFKVSRFGAGYFIGCDQHP CKYIAKTLY DD++E+T Sbjct: 52 FLFGSLPDKSRTCPSCMEGTLIFKVSRFGAGYFIGCDQHPNCKYIAKTLYG--DDEKEET 109 Query: 194 PQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSIT 373 PQ +++++EPKLLG + SNEK+LLK+GPYG YVQLGEDRKGY PKR+SV H+KDV +IT Sbjct: 110 PQ-SSSVDEPKLLGVHPTSNEKVLLKNGPYGYYVQLGEDRKGYAPKRSSVSHIKDVGAIT 168 Query: 374 LEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALE 553 E AL LL+YPLTLG HPKDG+PV++K+ KGGY++++R +A VPKN KP +IT+EKALE Sbjct: 169 HEVALNLLRYPLTLGDHPKDGYPVMIKLGKGGYTVKHRRTMASVPKNLKPEKITMEKALE 228 Query: 554 LLSGNNV 574 LLSG NV Sbjct: 229 LLSGKNV 235 [2][TOP] >UniRef100_UPI0001983099 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001983099 Length = 1183 Score = 278 bits (711), Expect = 2e-73 Identities = 137/191 (71%), Positives = 156/191 (81%) Frame = +2 Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 KF D+LF LPDKSR CPSC EGTLIFKVSRFG+GYFIGCDQHP+CKYIAK L D DD Sbjct: 980 KFGDFLFSFLPDKSRTCPSCMEGTLIFKVSRFGSGYFIGCDQHPKCKYIAKML---DGDD 1036 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361 +E+ Q+ T EEPK LG + GS+EKILLK+GPYG Y+QLGEDRKGY PKRASV H DV Sbjct: 1037 DEEVASQDKTFEEPKALGLSPGSSEKILLKNGPYGFYLQLGEDRKGYLPKRASVSH--DV 1094 Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541 SITLEDAL LL+YP+TLG HP D HPV+LK+AK G+SIR+R IA VPKN KPN+ITLE Sbjct: 1095 GSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHRRTIAPVPKNIKPNDITLE 1154 Query: 542 KALELLSGNNV 574 KAL+LL G +V Sbjct: 1155 KALKLLLGKDV 1165 [3][TOP] >UniRef100_UPI000034F143 DNA topoisomerase family protein n=1 Tax=Arabidopsis thaliana RepID=UPI000034F143 Length = 1280 Score = 260 bits (664), Expect = 6e-68 Identities = 123/191 (64%), Positives = 153/191 (80%) Frame = +2 Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 K+ D LF LP SR CPSC EGTL FK S+FGAGYFIGCDQHP CK+IAKTLY D+D Sbjct: 1069 KYEDVLFSLLPYPSRTCPSCMEGTLSFKASKFGAGYFIGCDQHPSCKFIAKTLYGEDED- 1127 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361 ED P +N +EEPKLLG + ++EK++LK GPYG YVQLGED+KG+TPKRA+ H DV Sbjct: 1128 -EDDPPKNNCVEEPKLLGLHPNTSEKVILKCGPYGHYVQLGEDKKGHTPKRANAAH--DV 1184 Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541 +SITLE AL LL+YPLTLG HP+DG PV+LK++K G++I++R +A VPKNT+P E+TLE Sbjct: 1185 NSITLESALELLRYPLTLGTHPEDGQPVVLKLSKSGFTIKHRRNMATVPKNTEPGEVTLE 1244 Query: 542 KALELLSGNNV 574 +A++LLSG NV Sbjct: 1245 RAMKLLSGKNV 1255 [4][TOP] >UniRef100_A7P530 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7P530_VITVI Length = 188 Score = 258 bits (658), Expect = 3e-67 Identities = 123/170 (72%), Positives = 140/170 (82%) Frame = +2 Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 KF D+LF LPDKSR CPSC EGTLIFKVSRFG+GYFIGCDQHP+CKYIAK L D DD Sbjct: 5 KFGDFLFSFLPDKSRTCPSCMEGTLIFKVSRFGSGYFIGCDQHPKCKYIAKML---DGDD 61 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361 +E+ Q+ T EEPK LG + GS+EKILLK+GPYG Y+QLGEDRKGY PKRASV H+KDV Sbjct: 62 DEEVASQDKTFEEPKALGLSPGSSEKILLKNGPYGFYLQLGEDRKGYLPKRASVSHIKDV 121 Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPK 511 SITLEDAL LL+YP+TLG HP D HPV+LK+AK G+SIR+R IA VPK Sbjct: 122 GSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHRRTIAPVPK 171 [5][TOP] >UniRef100_B8B0L5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=B8B0L5_ORYSI Length = 301 Score = 234 bits (596), Expect = 5e-60 Identities = 113/191 (59%), Positives = 143/191 (74%) Frame = +2 Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 KF LF L + SR+CPSC+EGTL FKVSR+G GYFIGCD+HP+CKYIA+TL SDDDD Sbjct: 93 KFGSILFSDLDNDSRICPSCSEGTLRFKVSRYGEGYFIGCDRHPKCKYIARTL--SDDDD 150 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361 E + + P+LLG S+EK+ LK GPYG YVQ+GEDRKG +PKRA + VKD+ Sbjct: 151 ETEASDETQRTFTPRLLGALPDSDEKVFLKQGPYGHYVQVGEDRKGVSPKRAPLSEVKDI 210 Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541 DSITL+DA+ LLQYP LGKHP D PV++ +K G+SIR+R +A +PK+ P +ITLE Sbjct: 211 DSITLKDAIELLQYPKILGKHPDDDLPVLITHSKAGFSIRHRRTLASLPKSADPKKITLE 270 Query: 542 KALELLSGNNV 574 +AL+LL+G NV Sbjct: 271 RALKLLTGKNV 281 [6][TOP] >UniRef100_A3BAP2 DNA topoisomerase n=1 Tax=Oryza sativa Japonica Group RepID=A3BAP2_ORYSJ Length = 1180 Score = 234 bits (596), Expect = 5e-60 Identities = 113/191 (59%), Positives = 143/191 (74%) Frame = +2 Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 KF LF L + SR+CPSC+EGTL FKVSR+G GYFIGCD+HP+CKYIA+TL SDDDD Sbjct: 972 KFGSILFSDLDNDSRICPSCSEGTLRFKVSRYGEGYFIGCDRHPKCKYIARTL--SDDDD 1029 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361 E + + P+LLG S+EK+ LK GPYG YVQ+GEDRKG +PKRA + VKD+ Sbjct: 1030 ETEASDETQRTFTPRLLGALPDSDEKVFLKQGPYGHYVQVGEDRKGVSPKRAPLSEVKDI 1089 Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541 DSITL+DA+ LLQYP LGKHP D PV++ +K G+SIR+R +A +PK+ P +ITLE Sbjct: 1090 DSITLKDAIELLQYPKILGKHPDDDLPVLITHSKAGFSIRHRRTLASLPKSADPKKITLE 1149 Query: 542 KALELLSGNNV 574 +AL+LL+G NV Sbjct: 1150 RALKLLTGKNV 1160 [7][TOP] >UniRef100_B9SPT5 DNA topoisomerase n=1 Tax=Ricinus communis RepID=B9SPT5_RICCO Length = 1071 Score = 232 bits (591), Expect = 2e-59 Identities = 118/190 (62%), Positives = 145/190 (76%) Frame = +2 Query: 5 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 184 F D+LFGSLPD SR CPSC EGTLIFK Y + +Y DD++ Sbjct: 886 FGDFLFGSLPDDSRTCPSCLEGTLIFK-------YMLD-------------IYG--DDED 923 Query: 185 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 364 E+TPQ N+ +EEPKLLG + S EK+LLK+GPYG Y+QLGEDRKGYTPKRASV H+KDVD Sbjct: 924 EETPQNNS-VEEPKLLGVHPVSTEKVLLKNGPYGFYLQLGEDRKGYTPKRASVSHIKDVD 982 Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEK 544 +ITLEDAL LL+YP+TLG HPKDGHP+ILK+AK G+++R+R IA VPKN KP+ ++LEK Sbjct: 983 NITLEDALELLRYPVTLGNHPKDGHPIILKLAKVGFAVRHRRTIASVPKNMKPDNVSLEK 1042 Query: 545 ALELLSGNNV 574 ALELLSG++V Sbjct: 1043 ALELLSGDDV 1052 [8][TOP] >UniRef100_C5Z4V5 DNA topoisomerase (Fragment) n=1 Tax=Sorghum bicolor RepID=C5Z4V5_SORBI Length = 1094 Score = 228 bits (582), Expect = 2e-58 Identities = 109/189 (57%), Positives = 145/189 (76%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 KF LF + SR+CPSC+EGTL FKVSR+G GYFIGCD+HP+CKYIA++L +D+ Sbjct: 910 KFGPILFPDVDKDSRICPSCSEGTLRFKVSRYGEGYFIGCDRHPKCKYIARSLSQQEDET 969 Query: 182 E--EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 E E++P+ T P+LLG S++K+ LK GPYG YVQ+GED+KG PKRAS+ VK Sbjct: 970 EPTEESPKSFT----PRLLGVMPDSDQKVFLKQGPYGYYVQIGEDKKGLFPKRASLSEVK 1025 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 D+DS+TLEDA+ LLQYP LGKHP+D HPV++ +K GY+I++R +ALVPK+T P ++T Sbjct: 1026 DIDSVTLEDAIELLQYPKILGKHPEDDHPVLITHSKVGYNIKHRRSLALVPKSTDPKKMT 1085 Query: 536 LEKALELLS 562 LE+AL+LLS Sbjct: 1086 LERALKLLS 1094 [9][TOP] >UniRef100_C3SA84 DNA topoisomerase n=1 Tax=Brachypodium distachyon RepID=C3SA84_BRADI Length = 856 Score = 228 bits (582), Expect = 2e-58 Identities = 112/187 (59%), Positives = 141/187 (75%) Frame = +2 Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 KF LF L D SR+CPSC+EGTL FKVSRFG GYFIGCD+HP+CKYIA+TL SD+DD Sbjct: 663 KFRPILFPDLDDASRICPSCSEGTLRFKVSRFGEGYFIGCDRHPKCKYIARTL--SDEDD 720 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361 E + ++ EP+LLG NEK+ LK GPYG Y+Q+GEDRKG + KRAS+ VK+V Sbjct: 721 ENEACEETKWNFEPRLLGVMPNLNEKVFLKQGPYGYYIQVGEDRKGISQKRASLSEVKNV 780 Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541 DSITLEDA+ LLQYP LGKHP D +PV++ +K G+S+R+R +A +PKNT +ITLE Sbjct: 781 DSITLEDAIELLQYPKILGKHPDDEYPVLMTHSKAGFSVRHRRTVAPLPKNTDLKKITLE 840 Query: 542 KALELLS 562 AL+LL+ Sbjct: 841 CALKLLA 847 [10][TOP] >UniRef100_C7J3V1 Os06g0281400 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=C7J3V1_ORYSJ Length = 197 Score = 214 bits (545), Expect = 4e-54 Identities = 104/173 (60%), Positives = 132/173 (76%) Frame = +2 Query: 56 SCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLG 235 SC+EGTL FKVSR+G GYFIGCD+HP+CKYIA+TL SDDDDE + + P+LLG Sbjct: 7 SCSEGTLRFKVSRYGEGYFIGCDRHPKCKYIARTL--SDDDDETEASDETQRTFTPRLLG 64 Query: 236 FNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTL 415 S+EK+ LK GPYG YVQ+GEDRKG +PKRA + VKD+DSITL+DA+ LLQYP L Sbjct: 65 ALPDSDEKVFLKQGPYGHYVQVGEDRKGVSPKRAPLSEVKDIDSITLKDAIELLQYPKIL 124 Query: 416 GKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLSGNNV 574 GKHP D PV++ +K G+SIR+R +A +PK+ P +ITLE+AL+LL+G NV Sbjct: 125 GKHPDDDLPVLITHSKAGFSIRHRRTLASLPKSADPKKITLERALKLLTGKNV 177 [11][TOP] >UniRef100_B9EZZ0 DNA topoisomerase n=1 Tax=Oryza sativa Japonica Group RepID=B9EZZ0_ORYSJ Length = 962 Score = 214 bits (544), Expect = 5e-54 Identities = 107/191 (56%), Positives = 136/191 (71%) Frame = +2 Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 KF LF L + SR+CPSC+EGTL KVS+ G GYFIGCD+HP+CKYIA+TL D+ Sbjct: 755 KFGSILFPDLDNDSRICPSCSEGTLRLKVSKHGEGYFIGCDRHPKCKYIARTLSVEVDET 814 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361 E Q+T P+LLG S+EK+ LK GPYG Y+Q+GED KG + KRA + VKD+ Sbjct: 815 EASDEIQSTFT--PRLLGVLPDSDEKVFLKQGPYGHYIQVGEDIKGVSRKRAPLSEVKDI 872 Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541 DSITLEDA+ LLQYP LGKHP D PV++ +K G+ IR+R +A +PK+ P EITLE Sbjct: 873 DSITLEDAIELLQYPKILGKHPDDDLPVLVTHSKSGFRIRHRRTLAPLPKSADPKEITLE 932 Query: 542 KALELLSGNNV 574 +AL+LL+G NV Sbjct: 933 RALKLLTGKNV 943 [12][TOP] >UniRef100_B8AHL0 DNA topoisomerase n=1 Tax=Oryza sativa Indica Group RepID=B8AHL0_ORYSI Length = 968 Score = 214 bits (544), Expect = 5e-54 Identities = 107/191 (56%), Positives = 136/191 (71%) Frame = +2 Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 KF LF L + SR+CPSC+EGTL KVS+ G GYFIGCD+HP+CKYIA+TL D+ Sbjct: 761 KFGSILFPDLDNDSRICPSCSEGTLRLKVSKHGEGYFIGCDRHPKCKYIARTLSVEVDET 820 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361 E Q+T P+LLG S+EK+ LK GPYG Y+Q+GED KG + KRA + VKD+ Sbjct: 821 EASDEIQSTFT--PRLLGVLPDSDEKVFLKQGPYGHYIQVGEDIKGVSRKRAPLSEVKDI 878 Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541 DSITLEDA+ LLQYP LGKHP D PV++ +K G+ IR+R +A +PK+ P EITLE Sbjct: 879 DSITLEDAIELLQYPKILGKHPDDDLPVLVTHSKSGFRIRHRRTLAPLPKSADPKEITLE 938 Query: 542 KALELLSGNNV 574 +AL+LL+G NV Sbjct: 939 RALKLLTGKNV 949 [13][TOP] >UniRef100_A5B2R3 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5B2R3_VITVI Length = 672 Score = 200 bits (508), Expect = 7e-50 Identities = 99/145 (68%), Positives = 118/145 (81%) Frame = +2 Query: 140 KYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG 319 +YIAK L D DD+E+ Q+ T EEPK+LG + GS+EKILLK+GPYG Y+QLGEDRKG Sbjct: 50 RYIAKML---DGDDDEEVASQDKTFEEPKVLGLSPGSSEKILLKNGPYGFYLQLGEDRKG 106 Query: 320 YTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIA 499 Y PKRASV H+KDV SITLEDAL LL+YP+TLG HP D HPV+LK+AK G+SIR+R IA Sbjct: 107 YLPKRASVSHIKDVGSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHRRTIA 166 Query: 500 LVPKNTKPNEITLEKALELLSGNNV 574 VPKN KPN+ITLEKAL+LL G +V Sbjct: 167 PVPKNIKPNDITLEKALKLLLGKDV 191 [14][TOP] >UniRef100_O49571 DNA topoisomerase like-protein n=1 Tax=Arabidopsis thaliana RepID=O49571_ARATH Length = 1179 Score = 196 bits (498), Expect = 1e-48 Identities = 91/145 (62%), Positives = 120/145 (82%) Frame = +2 Query: 140 KYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG 319 K+IAKTLY D+D ED P +N +EEPKLLG + ++EK++LK GPYG YVQLGED+KG Sbjct: 1012 KFIAKTLYGEDED--EDDPPKNNCVEEPKLLGLHPNTSEKVILKCGPYGHYVQLGEDKKG 1069 Query: 320 YTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIA 499 +TPKRA+ H+KDV+SITLE AL LL+YPLTLG HP+DG PV+LK++K G++I++R +A Sbjct: 1070 HTPKRANAAHIKDVNSITLESALELLRYPLTLGTHPEDGQPVVLKLSKSGFTIKHRRNMA 1129 Query: 500 LVPKNTKPNEITLEKALELLSGNNV 574 VPKNT+P E+TLE+A++LLSG NV Sbjct: 1130 TVPKNTEPGEVTLERAMKLLSGKNV 1154 [15][TOP] >UniRef100_B7F873 cDNA clone:J033143C09, full insert sequence n=1 Tax=Oryza sativa Japonica Group RepID=B7F873_ORYSJ Length = 286 Score = 188 bits (478), Expect = 2e-46 Identities = 94/170 (55%), Positives = 119/170 (70%) Frame = +2 Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 KF LF L + SR+CPSC+EGTL KVS+ G GYFIGCD+HP+CKYIA+TL D+ Sbjct: 69 KFGSILFPDLDNDSRICPSCSEGTLRLKVSKHGEGYFIGCDRHPKCKYIARTLSVEVDET 128 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361 E Q+T P+LLG S+EK+ LK GPYG Y+Q+GED KG + KRA + VKD+ Sbjct: 129 EASDEIQSTFT--PRLLGVLPDSDEKVFLKQGPYGHYIQVGEDIKGVSRKRAPLSEVKDI 186 Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPK 511 DSITLEDA+ LLQYP LGKHP D PV++ +K G+ IR+R +A +PK Sbjct: 187 DSITLEDAIELLQYPKILGKHPDDDLPVLVTHSKSGFRIRHRRTLAPLPK 236 [16][TOP] >UniRef100_Q2GG85 DNA topoisomerase n=1 Tax=Ehrlichia chaffeensis str. Arkansas RepID=Q2GG85_EHRCR Length = 820 Score = 119 bits (298), Expect = 2e-25 Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 1/188 (0%) Frame = +2 Query: 11 DYLFGS-LPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187 +Y+F S + SRVCP C +GTL +S+ G F+GC ++P CKY K + S DD + Sbjct: 587 NYIFSSDKSESSRVCPVCNDGTLELNISK--NGIFLGCSKYPECKY-TKNVGSGIVDDTD 643 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367 +T + PK+LG ++ + ++I LK GPYG+Y+Q+G D+ G KRA++P D + Sbjct: 644 NT-------QYPKILGIDAATGQEIYLKKGPYGLYLQIGNDKSG---KRAAIPKNIDANL 693 Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547 + L+ A +L P++LG HP G + L + K G I Y K V +I++E A Sbjct: 694 LDLQMAEKILSLPISLGTHPDTGQEIKLGLGKFGAYILYGGKYFSVKNEHNFLDISIENA 753 Query: 548 LELLSGNN 571 + +++ N+ Sbjct: 754 INIIANNS 761 [17][TOP] >UniRef100_Q2GG88 Topoisomerase DNA-binding C4 zinc finger domain protein n=2 Tax=Ehrlichia chaffeensis RepID=Q2GG88_EHRCR Length = 260 Score = 119 bits (298), Expect = 2e-25 Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 1/188 (0%) Frame = +2 Query: 11 DYLFGS-LPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187 +Y+F S + SRVCP C +GTL +S+ G F+GC ++P CKY K + S DD + Sbjct: 47 NYIFSSDKSESSRVCPVCNDGTLELNISK--NGIFLGCSKYPECKY-TKNVGSGIVDDTD 103 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367 +T + PK+LG ++ + ++I LK GPYG+Y+Q+G D+ G KRA++P D + Sbjct: 104 NT-------QYPKILGIDAATGQEIYLKKGPYGLYLQIGNDKSG---KRAAIPKNIDANL 153 Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547 + L+ A +L P++LG HP G + L + K G I Y K V +I++E A Sbjct: 154 LDLQMAEKILSLPISLGTHPDTGQEIKLGLGKFGAYILYGGKYFSVKNEHNFLDISIENA 213 Query: 548 LELLSGNN 571 + +++ N+ Sbjct: 214 INIIANNS 221 [18][TOP] >UniRef100_Q40K50 DNA topoisomerase n=1 Tax=Ehrlichia chaffeensis str. Sapulpa RepID=Q40K50_EHRCH Length = 820 Score = 119 bits (298), Expect = 2e-25 Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 1/188 (0%) Frame = +2 Query: 11 DYLFGS-LPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187 +Y+F S + SRVCP C +GTL +S+ G F+GC ++P CKY K + S DD + Sbjct: 587 NYIFSSDKSESSRVCPVCNDGTLELNISK--NGIFLGCSKYPECKY-TKNVGSGIVDDTD 643 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367 +T + PK+LG ++ + ++I LK GPYG+Y+Q+G D+ G KRA++P D + Sbjct: 644 NT-------QYPKILGIDAATGQEIYLKKGPYGLYLQIGNDKSG---KRAAIPKNIDANL 693 Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547 + L+ A +L P++LG HP G + L + K G I Y K V +I++E A Sbjct: 694 LDLQMAEKILSLPISLGTHPDTGQEIKLGLGKFGAYILYGGKYFSVKNEHNFLDISIENA 753 Query: 548 LELLSGNN 571 + +++ N+ Sbjct: 754 INIIANNS 761 [19][TOP] >UniRef100_Q68X45 DNA topoisomerase 1 n=1 Tax=Rickettsia typhi RepID=TOP1_RICTY Length = 779 Score = 117 bits (293), Expect = 6e-25 Identities = 75/190 (39%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Frame = +2 Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178 K DY LFG + S+VCPSC G L K+ +FGA F+ C +P C + K S +D Sbjct: 584 KALDYHLFGENKE-SKVCPSCKTGQLSLKLGKFGA--FLACSNYPECTF--KKSIVSGND 638 Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358 + ED +T + + K+LG + E I LK+GPYG Y+QLGE PKR VP Sbjct: 639 NNEDEGNLSTILNDNKILGTDKDGVE-IYLKTGPYGPYIQLGEQCGKVKPKRTPVPTNLK 697 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 ITLE AL LL PL +G H G +I+ +K G I+Y K VPK + L Sbjct: 698 QSEITLEVALKLLSLPLKIGIHKDSGEEIIIGYSKFGPYIKYMCKFISVPKKYDFLNLNL 757 Query: 539 EKALELLSGN 568 + A++L+ N Sbjct: 758 DDAIKLIENN 767 [20][TOP] >UniRef100_Q9ZDK2 DNA topoisomerase 1 n=1 Tax=Rickettsia prowazekii RepID=TOP1_RICPR Length = 776 Score = 117 bits (293), Expect = 6e-25 Identities = 73/190 (38%), Positives = 102/190 (53%), Gaps = 1/190 (0%) Frame = +2 Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178 K DY LFG +S+VCPSC G L K+ +FGA F+ C +P C + + +D++ Sbjct: 584 KALDYHLFGE-DKESKVCPSCKTGQLSLKLGKFGA--FLACSNYPECTFKKSIVSGNDNN 640 Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358 ++E P +T + + K+LG + E I LK GPYG Y+QLGE PKR VP Sbjct: 641 EDEGDP--STILNDNKILGTDQDGVE-IYLKKGPYGPYIQLGEQCGKVKPKRTPVPANLK 697 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 ITLE AL LL PL +G H G +I+ +K G I+Y K VPK ++L Sbjct: 698 QSEITLEIALKLLNLPLKIGIHKDSGEEIIIGYSKFGPYIKYMCKFISVPKKYDFLNLSL 757 Query: 539 EKALELLSGN 568 A++L+ N Sbjct: 758 NDAMKLIQNN 767 [21][TOP] >UniRef100_Q4UM42 DNA topoisomerase 1 n=1 Tax=Rickettsia felis RepID=TOP1_RICFE Length = 776 Score = 116 bits (291), Expect = 1e-24 Identities = 72/189 (38%), Positives = 101/189 (53%) Frame = +2 Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 K DY S +S+ CPSC G L K+ +FGA F+ C +P C + K++ S +D++ Sbjct: 584 KALDYHLFSENKESKACPSCKTGELSLKLGKFGA--FLACSNYPECTF-RKSIVSGNDNN 640 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361 E D T E K+LG + E I LK GPYG YVQLGE PKR+ VP + Sbjct: 641 ENDGDLAATP-NENKVLGTDKDGIE-IYLKKGPYGPYVQLGEQEGKVKPKRSPVPASLNQ 698 Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541 + ITLE AL LL PL +G H G +++ K G I+Y K +PK ++L+ Sbjct: 699 NDITLEMALKLLSLPLKIGIHKDSGEEIMIGYGKFGPYIKYMGKFISIPKKYDFLNLSLD 758 Query: 542 KALELLSGN 568 A++L+ N Sbjct: 759 DAMKLIEDN 767 [22][TOP] >UniRef100_A8GN12 DNA topoisomerase n=1 Tax=Rickettsia akari str. Hartford RepID=A8GN12_RICAH Length = 776 Score = 114 bits (286), Expect = 4e-24 Identities = 70/191 (36%), Positives = 105/191 (54%), Gaps = 1/191 (0%) Frame = +2 Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178 K DY LFG + S+VCPSC G L K+ +FGA F+ C +P C + K++ S +D+ Sbjct: 584 KALDYHLFGENKE-SKVCPSCKTGELSLKLGKFGA--FLACSNYPECTF-RKSIVSGNDN 639 Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358 +E + + + K+LG + E I LK GPYG Y+Q GE PKR+ +P + + Sbjct: 640 NENEA-ELSAIPNGNKILGTDKDGIE-IYLKKGPYGPYIQHGEQEGKVKPKRSPIPAILN 697 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 + ITLE AL LL PL +G H G +++ K G I+Y K +PK ++L Sbjct: 698 QNDITLEIALKLLSLPLKIGIHKDSGEEIMIGYGKFGPYIKYMSKFISIPKKYDFLNLSL 757 Query: 539 EKALELLSGNN 571 + A++L+ NN Sbjct: 758 DDAMKLIEDNN 768 [23][TOP] >UniRef100_C5Z8K8 Putative uncharacterized protein Sb10g010330 n=1 Tax=Sorghum bicolor RepID=C5Z8K8_SORBI Length = 227 Score = 114 bits (285), Expect = 5e-24 Identities = 68/165 (41%), Positives = 96/165 (58%), Gaps = 4/165 (2%) Frame = +2 Query: 92 RFGAGYFIGCDQHPRC--KYIAKTLYSSDDDDE--EDTPQQNTTIEEPKLLGFNSGSNEK 259 +FG F D+ R +YIA++ +D+ E E++P+ T P+LLG S++K Sbjct: 70 KFGPILFPDVDKDSRICPRYIARSFSQQEDETEPTEESPKSFT----PRLLGVMPDSDQK 125 Query: 260 ILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439 + LK GPYG YVQ GED+KG PKRAS L+ GKHP+D H Sbjct: 126 VFLKQGPYGYYVQNGEDKKGLFPKRAS----------------------LSEGKHPEDDH 163 Query: 440 PVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLSGNNV 574 PV++ +K GY+I++R +A VPKN P ++TLE AL+LLSG +V Sbjct: 164 PVLITHSKVGYNIKHRRSLAQVPKNMDPKKMTLEPALKLLSGKSV 208 [24][TOP] >UniRef100_C4YUC4 DNA topoisomerase n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4YUC4_9RICK Length = 770 Score = 112 bits (279), Expect = 3e-23 Identities = 71/190 (37%), Positives = 100/190 (52%), Gaps = 1/190 (0%) Frame = +2 Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178 K DY LFG + S+VCPSC G L K+ +FGA F+ C +P C + + +D++ Sbjct: 584 KALDYHLFGENKE-SKVCPSCKTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640 Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358 + E P + E K+LG N E I LK GPYG Y+QLGE PKR+ VP + Sbjct: 641 ENEGEP--SAIPNENKVLGTNKDGVE-IYLKKGPYGPYIQLGEQEGKVKPKRSPVPANLN 697 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 + ITL+ AL LL PL +G G +++ K G I+Y K VPK + L Sbjct: 698 QNDITLDIALKLLSLPLKIGVPKDSGEEIMIGYGKFGPYIKYMGKFISVPKKYDFLNLRL 757 Query: 539 EKALELLSGN 568 + A++L+ N Sbjct: 758 DDAMKLIEDN 767 [25][TOP] >UniRef100_A8EZB7 DNA topoisomerase n=1 Tax=Rickettsia canadensis str. McKiel RepID=A8EZB7_RICCK Length = 777 Score = 109 bits (273), Expect = 1e-22 Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 1/190 (0%) Frame = +2 Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178 K DY LFG +S+ CPSC G L K+ +FGA F+ C+ +P+C + K++ S +++ Sbjct: 584 KALDYHLFGE-NQESKACPSCKTGELSLKLGKFGA--FLACNNYPKCTF-RKSIVSGNNN 639 Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358 +E + T EE K+LG + E I LK GPYG Y+Q GE KR+ VP + Sbjct: 640 NENEDKLSTTPNEENKVLGTDKDGIE-IYLKKGPYGPYIQRGEHEGTVKLKRSPVPASLN 698 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 ITL+ AL LL PL +G H +++ K G I+Y K +PK ++L Sbjct: 699 QSDITLDIALKLLSLPLKIGTHKDTHEEIMIGYGKFGPYIKYIGKFISIPKKYDFLNLSL 758 Query: 539 EKALELLSGN 568 ++A++L+ N Sbjct: 759 DEAIQLIEDN 768 [26][TOP] >UniRef100_C3PN41 DNA topoisomerase n=1 Tax=Rickettsia africae ESF-5 RepID=C3PN41_RICAE Length = 776 Score = 109 bits (272), Expect = 2e-22 Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%) Frame = +2 Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178 K DY LFG + S++CPSC G L K+ +FGA F+ C +P C + + +D++ Sbjct: 584 KALDYHLFGENKE-SKICPSCNTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640 Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358 + E P T E K+LG + E I LK GPYG Y+QLG+ PKR+ VP + Sbjct: 641 ENEGEPA--TMPNENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLN 697 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 + ITL+ AL LL PL +G H +++ K G I+Y D+ V K ++L Sbjct: 698 QNDITLDIALKLLSLPLKIGIHKDSDEEIMIGYGKFGPYIKYMDQFISVQKKYDFLNLSL 757 Query: 539 EKALELLSGN 568 + A++L+ N Sbjct: 758 DDAMKLIEEN 767 [27][TOP] >UniRef100_A8GWP3 DNA topoisomerase n=1 Tax=Rickettsia bellii OSU 85-389 RepID=A8GWP3_RICB8 Length = 800 Score = 109 bits (272), Expect = 2e-22 Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 2/184 (1%) Frame = +2 Query: 14 YLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDT 193 ++FG D S+VCPSC G L K+ +FGA F+ C +P C + K++ S +D++E D Sbjct: 589 HIFGENKD-SKVCPSCKTGELSLKLGKFGA--FLACSNYPECNF-RKSIVSGNDNNEADG 644 Query: 194 PQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE--DRKGYTPKRASVPHVKDVDS 367 ++ + E K+LG + E I LK GPYG Y+Q GE D K PKR+ +P + + Sbjct: 645 EAKDI-VNENKVLGKDKEGIE-IYLKKGPYGPYIQYGEQVDSK-IKPKRSPLPAGLNQND 701 Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547 ITL+ AL LL PL +G H + G V++ K G I+Y K +PK ++L+ A Sbjct: 702 ITLDMALKLLSLPLKIGNHKESGEEVLVGYGKFGPYIKYMGKFISIPKKYDFLNLSLDDA 761 Query: 548 LELL 559 ++L+ Sbjct: 762 MKLI 765 [28][TOP] >UniRef100_Q1RIM1 DNA topoisomerase 1 n=1 Tax=Rickettsia bellii RML369-C RepID=TOP1_RICBR Length = 800 Score = 109 bits (272), Expect = 2e-22 Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 2/184 (1%) Frame = +2 Query: 14 YLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDT 193 ++FG D S+VCPSC G L K+ +FGA F+ C +P C + K++ S +D++E D Sbjct: 589 HIFGENKD-SKVCPSCKTGELSLKLGKFGA--FLACSNYPECNF-RKSIVSGNDNNEADG 644 Query: 194 PQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE--DRKGYTPKRASVPHVKDVDS 367 ++ + E K+LG + E I LK GPYG Y+Q GE D K PKR+ +P + + Sbjct: 645 EAKDI-VNENKVLGKDKEGIE-IYLKKGPYGPYIQYGEQVDSK-IKPKRSPLPAGLNQND 701 Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547 ITL+ AL LL PL +G H + G V++ K G I+Y K +PK ++L+ A Sbjct: 702 ITLDMALKLLSLPLKIGNHKESGEEVLVGYGKFGPYIKYMGKFISIPKKYDFLNLSLDDA 761 Query: 548 LELL 559 ++L+ Sbjct: 762 MKLI 765 [29][TOP] >UniRef100_Q3YSD8 DNA topoisomerase n=1 Tax=Ehrlichia canis str. Jake RepID=Q3YSD8_EHRCJ Length = 820 Score = 108 bits (271), Expect = 2e-22 Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Frame = +2 Query: 11 DYLFGSLPDKS---RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 +Y+F S DKS RVCP+C +GTL +S+ G F+GC +P CKY D D Sbjct: 587 NYIFSS--DKSETGRVCPACNDGTLGLNISK--NGIFLGCSGYPECKYTKNV--GGDLVD 640 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361 + D ++ PK+LG ++ + ++I LK GPYG+Y+Q+G D+ G KRA++P + Sbjct: 641 DVDN------VQYPKVLGIDTATCQEIYLKKGPYGVYLQIGSDKNG---KRAAIPKNMNA 691 Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541 + + L+ A +L P++LG HP+ + L + K G I Y K + + ++ LE Sbjct: 692 NLLDLQMAEKILNLPISLGTHPETCKEIKLGLGKFGAYILYEGKYFSIKNESNFLDVKLE 751 Query: 542 KALELLSGNN 571 A+++++ ++ Sbjct: 752 DAIDIIANSS 761 [30][TOP] >UniRef100_Q7PBH0 DNA topoisomerase n=1 Tax=Rickettsia sibirica 246 RepID=Q7PBH0_RICSI Length = 776 Score = 107 bits (267), Expect = 7e-22 Identities = 67/190 (35%), Positives = 100/190 (52%), Gaps = 1/190 (0%) Frame = +2 Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178 K DY LFG + S++CPSC G L K+ +FGA F+ C +P C + + +D++ Sbjct: 584 KALDYHLFGENKE-SKICPSCNTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640 Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358 + E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP + Sbjct: 641 ENEGEPAAMPN--ENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLN 697 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 + ITL+ AL LL PL +G H +++ K G I+Y D+ V K ++L Sbjct: 698 QNDITLDIALKLLSLPLKIGIHKDSDEEIMIGYGKFGPYIKYMDQFISVQKKYDFLNLSL 757 Query: 539 EKALELLSGN 568 + A++L+ N Sbjct: 758 DDAMKLIEEN 767 [31][TOP] >UniRef100_B0BX36 DNA topoisomerase n=1 Tax=Rickettsia rickettsii str. Iowa RepID=B0BX36_RICRO Length = 776 Score = 106 bits (265), Expect = 1e-21 Identities = 68/190 (35%), Positives = 99/190 (52%), Gaps = 1/190 (0%) Frame = +2 Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178 K DY LFG + S++CPSC G L K+ +FGA F+ C +P C + + +D++ Sbjct: 584 KALDYHLFGENKE-SKICPSCHTGKLSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640 Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358 + E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP + Sbjct: 641 ENEGEPAAMPN--ENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLN 697 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 + ITL+ AL LL PL +G H +I+ K G I+Y K V K ++L Sbjct: 698 QNDITLDIALKLLSLPLKIGIHKDSDEEIIIGYGKFGPYIKYMGKFISVQKKYDFLNLSL 757 Query: 539 EKALELLSGN 568 + A++L+ N Sbjct: 758 DDAMKLIEEN 767 [32][TOP] >UniRef100_A8GRN0 DNA topoisomerase n=1 Tax=Rickettsia rickettsii str. 'Sheila Smith' RepID=A8GRN0_RICRS Length = 776 Score = 106 bits (265), Expect = 1e-21 Identities = 68/190 (35%), Positives = 99/190 (52%), Gaps = 1/190 (0%) Frame = +2 Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178 K DY LFG + S++CPSC G L K+ +FGA F+ C +P C + + +D++ Sbjct: 584 KALDYHLFGENKE-SKICPSCHTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640 Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358 + E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP + Sbjct: 641 ENEGEPAAMPN--ENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLN 697 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 + ITL+ AL LL PL +G H +I+ K G I+Y K V K ++L Sbjct: 698 QNDITLDIALKLLSLPLKIGIHKDSDEEIIIGYGKFGPYIKYMGKFISVQKKYDFLNLSL 757 Query: 539 EKALELLSGN 568 + A++L+ N Sbjct: 758 DDAMKLIEEN 767 [33][TOP] >UniRef100_C4K2S3 DNA topoisomerase n=1 Tax=Rickettsia peacockii str. Rustic RepID=C4K2S3_RICPU Length = 776 Score = 105 bits (262), Expect = 2e-21 Identities = 67/190 (35%), Positives = 99/190 (52%), Gaps = 1/190 (0%) Frame = +2 Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178 K DY LFG + S++CPSC G L K+ +FGA F+ C +P C + + +D++ Sbjct: 584 KALDYHLFGENKE-SKICPSCHTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640 Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358 + E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP + Sbjct: 641 ENEGEPAAMPN--ENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLN 697 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 + ITL+ AL LL PL +G H +++ K G I+Y K V K ++L Sbjct: 698 QNDITLDIALKLLSLPLKIGIHKDSDEEIMIGYGKFGPYIKYMGKFISVQKKYDFLNLSL 757 Query: 539 EKALELLSGN 568 + A++L+ N Sbjct: 758 DDAMKLIEEN 767 [34][TOP] >UniRef100_A8F198 DNA topoisomerase n=1 Tax=Rickettsia massiliae MTU5 RepID=A8F198_RICM5 Length = 776 Score = 105 bits (261), Expect = 3e-21 Identities = 68/190 (35%), Positives = 98/190 (51%), Gaps = 1/190 (0%) Frame = +2 Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178 K DY LFG + S+VC SC G L K+ +FGA F+ C +P C + + +D++ Sbjct: 584 KALDYHLFGENKE-SKVCTSCNTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640 Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358 + E P E K+LG + E I LK GPYG Y+QLGE PKR+ VP + Sbjct: 641 ENEGEPAAMPN--ENKVLGTDKDGVE-IYLKKGPYGPYIQLGEQEGKVKPKRSPVPASLN 697 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 + ITL+ AL LL PL +G H +++ K G I+Y K V K ++L Sbjct: 698 QNDITLDIALKLLSLPLKIGIHKDSDEEIMVGYGKFGPYIKYMGKFIAVQKKYDFLNLSL 757 Query: 539 EKALELLSGN 568 + A++L+ N Sbjct: 758 DDAMKLIEEN 767 [35][TOP] >UniRef100_Q92IH1 DNA topoisomerase 1 n=1 Tax=Rickettsia conorii RepID=TOP1_RICCN Length = 776 Score = 104 bits (260), Expect = 4e-21 Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 1/190 (0%) Frame = +2 Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178 K DY LFG + S++CPSC G L K+ +FGA F+ C +P C + + +D++ Sbjct: 584 KALDYHLFGENKE-SKICPSCNTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640 Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358 + E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP + Sbjct: 641 ENEGEPAAMPN--ENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLN 697 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 + ITL+ AL LL PL +G H +++ K G I+Y + V K ++L Sbjct: 698 QNDITLDIALKLLSLPLKIGIHKDSDEEIMIGYGKFGPYIKYMGQFISVQKKYDFLNLSL 757 Query: 539 EKALELLSGN 568 + A++L+ N Sbjct: 758 DDAMKLIEEN 767 [36][TOP] >UniRef100_C6XL73 DNA topoisomerase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XL73_HIRBI Length = 865 Score = 102 bits (253), Expect = 3e-20 Identities = 60/176 (34%), Positives = 92/176 (52%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP C EG L K+ R GA FIGC +P CK+ +++D D ED + Sbjct: 599 RLCPLCKEGQLSMKLGRNGA--FIGCSNYPECKHTRP--FTTDGSDAEDAVSP-----DG 649 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 KLLG + + + I L++G +G YVQLGE PKR S+P D +TL A+ L+ Sbjct: 650 KLLGQDPETGKDISLRTGRFGPYVQLGEGIGKEKPKRGSIPKGWKADELTLAQAIQLINL 709 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLSGNN 571 P +G HP+DG + + G ++++ A +P E+ L +A+ L++ N Sbjct: 710 PREIGPHPEDGEMMYANFGRYGPYVQHQKTYANLPDPMDVFEVGLNRAVALIAEKN 765 [37][TOP] >UniRef100_Q5HBJ0 DNA topoisomerase n=1 Tax=Ehrlichia ruminantium str. Welgevonden RepID=Q5HBJ0_EHRRW Length = 819 Score = 101 bits (251), Expect = 5e-20 Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 1/176 (0%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 ++CP C GTL +S+ G F+GC Q+P CKY K + S D+ E + + P Sbjct: 597 KMCPVCNVGTLSLNISKNGV--FLGCSQYPECKY-TKNIGDSTVDNTEVS-------QYP 646 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 ++LG ++ S E I LK GPYGIY+Q+G + G KRA++P D++ + LE A +L Sbjct: 647 RVLGSDAASGEDIYLKKGPYGIYLQIGSGKDG---KRATLPKDIDLNLLDLEMAKKILSL 703 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPK-NTKPNEITLEKALELLSGN 568 P++LG +P + L + K G I Y K + K +ITLE A+ ++ N Sbjct: 704 PISLGMYPDTNSEIKLGLGKFGAYIFYEGKYFSIKKFEGNFLDITLENAIAIIQKN 759 [38][TOP] >UniRef100_Q0AQ63 DNA topoisomerase n=1 Tax=Maricaulis maris MCS10 RepID=Q0AQ63_MARMM Length = 867 Score = 101 bits (251), Expect = 5e-20 Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CPSC EGTL ++ +FGA F+GC HP C + + +DD + D ++ P Sbjct: 597 RLCPSCKEGTLSLRLGKFGA--FLGCSNHPDCSFTRQMSPPGEDDAQGD----RVIVQHP 650 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQL---GEDRKGYTPKRASVPHVKDVDSITLEDALVL 394 + + + + LK+G +G Y+Q+ GED+ PKR+S+P D ++T E A+ L Sbjct: 651 E-------TGKDVELKNGRFGWYLQMQLDGEDK----PKRSSIPKGWDAATLTEEQAIKL 699 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 + P T+G+HP DG P+ + + G + + A +P + EI L +A+ +++ Sbjct: 700 IDLPRTVGEHPDDGQPITANIGRYGPYVHHDKTYANIPSVEEVFEIGLNRAVSVIA 755 [39][TOP] >UniRef100_C7JES1 DNA topoisomerase I n=8 Tax=Acetobacter pasteurianus RepID=C7JES1_ACEP3 Length = 897 Score = 101 bits (251), Expect = 5e-20 Identities = 64/176 (36%), Positives = 96/176 (54%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 RVCPSC G L K+ R+GA FIGC +P C+Y + +SD +E D + Sbjct: 604 RVCPSCGTGRLGLKLGRYGA--FIGCSNYPECQYTRRL--TSDSAEEGDDAALKDGM--- 656 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 +LLG N + E I ++ GP+G+YVQ GE + K PKRAS+P + +SITL+ AL L Sbjct: 657 RLLGQNPETGEDITVRQGPWGLYVQQGEPNPEDKKAKPKRASLPKNINGESITLDQALGL 716 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +G HP+ G P+ + + G ++ + K+ I L +A++ L+ Sbjct: 717 LSLPRLVGIHPETGEPIQAGLGRFGPFVKMGAVYGSLDKDDDVLTIGLNRAVDALA 772 [40][TOP] >UniRef100_B4R961 DNA topoisomerase n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4R961_PHEZH Length = 878 Score = 100 bits (250), Expect = 6e-20 Identities = 65/187 (34%), Positives = 100/187 (53%), Gaps = 2/187 (1%) Frame = +2 Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 A LF + D S RVCP C G L K SR GA FIGC +P C++ + D + Sbjct: 583 ASTLFPPMADGSDPRVCPRCGSGRLSLKPSRTGA--FIGCSNYPECRF-TRPFGPPDAEG 639 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361 E + ++ LG + + E + LK+G +G YVQLGE K PKR+S+P V Sbjct: 640 AEASGDRD--------LGTDPQTGETVWLKAGRFGPYVQLGEGEK---PKRSSLPKGWSV 688 Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541 + LE AL LL+ P +G HP+DG P++ + + G +++ A +P + E+ L Sbjct: 689 ADMDLEKALRLLRLPREIGPHPEDGKPILAGIGRYGPFVQHNGTYANLPSVDEVFEVGLN 748 Query: 542 KALELLS 562 +A++L++ Sbjct: 749 RAVDLIA 755 [41][TOP] >UniRef100_A4WUZ1 DNA topoisomerase n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4WUZ1_RHOS5 Length = 880 Score = 100 bits (250), Expect = 6e-20 Identities = 66/188 (35%), Positives = 97/188 (51%), Gaps = 3/188 (1%) Frame = +2 Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 A +L+ PD S R+CP+C G L K +R G G FIGC +P C+Y + D+D Sbjct: 578 APHLYPPRPDGSDPRICPTCGSGRLHLKTAR-GGGAFIGCGNYPECRYTRPISVTGDED- 635 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT-PKRASVPHVKD 358 N + KLLG + + I L+SG +G YVQ GE P RAS+P Sbjct: 636 -------NAISPDGKLLGHDE-DGQPITLRSGRFGPYVQRGEATAEVPKPPRASLPKGWA 687 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 DS+ LE A +LL P +G+HP+DG PV + + G +++ A +P I + Sbjct: 688 PDSVDLERARMLLNLPRLVGQHPEDGQPVEAAIGRYGPYVKHGSTYANLPDVEDVFTIGM 747 Query: 539 EKALELLS 562 +A+E+L+ Sbjct: 748 NRAVEVLA 755 [42][TOP] >UniRef100_Q5FHL9 DNA topoisomerase n=1 Tax=Ehrlichia ruminantium str. Gardel RepID=Q5FHL9_EHRRG Length = 819 Score = 100 bits (249), Expect = 8e-20 Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 1/176 (0%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 ++CP C GTL +S+ G F+GC Q+P CKY K + S D+ E + + P Sbjct: 597 KMCPVCNVGTLSLNISKNGV--FLGCSQYPECKY-TKNIGDSTVDNTEVS-------QYP 646 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 ++LG ++ S E I LK GPYGIY+Q+G + G KRA++P D++ + LE A +L Sbjct: 647 RVLGSDAASGEDIYLKKGPYGIYLQIGGGKDG---KRATLPKDIDLNLLDLEMAKKILSL 703 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPK-NTKPNEITLEKALELLSGN 568 P++LG +P + L + K G I Y K + K +ITLE A+ ++ N Sbjct: 704 PISLGMYPDTNSEIKLGLGKFGAYIFYEGKYFSIKKFEGNFLDITLENAIAIIQKN 759 [43][TOP] >UniRef100_Q017B0 DNA topoisomerase n=1 Tax=Ostreococcus tauri RepID=Q017B0_OSTTA Length = 1006 Score = 100 bits (249), Expect = 8e-20 Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 25/198 (12%) Frame = +2 Query: 41 SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYI-------AKTLYSSDDDDEEDTPQ 199 +R CPSC G L K S+ G FIGC ++P C + + +DD D + Sbjct: 683 ARKCPSCKTGRLGLKPSKSGG--FIGCSRYPECGFTHPLHPIRGAIVSDTDDADFMASDA 740 Query: 200 QNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGED------------RKGYTPKRASV 343 + + PK+LG + + +I L+ GPYG Y+QLGE +K P+R V Sbjct: 741 SSDVLLYPKILGVDPETGSEISLRLGPYGPYLQLGEKAAPVVSEDGKKAKKPPAPRRVGV 800 Query: 344 PHV-KDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNT- 517 ++ KDV +TLEDA+ L +YP +GKHP PV + + GY + A V K+ Sbjct: 801 ANIEKDVSELTLEDAVRLFEYPKEIGKHPMTESPVSINMGPFGYYVACDGINASVGKSVL 860 Query: 518 ----KPNEITLEKALELL 559 + +TLE+A+ELL Sbjct: 861 KRVGSLDNVTLEEAVELL 878 [44][TOP] >UniRef100_A4RYV6 DNA topoisomerase (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RYV6_OSTLU Length = 840 Score = 100 bits (248), Expect = 1e-19 Identities = 61/179 (34%), Positives = 90/179 (50%), Gaps = 20/179 (11%) Frame = +2 Query: 2 KFADYLFGSLPD------KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYI----- 148 K +LFG D ++R CPSC G L K S+ AG FIGC ++P C + Sbjct: 661 KLGQHLFGEATDSDDVVSEARRCPSCKIGRLGLKPSK--AGGFIGCSRYPECGFTHPLHP 718 Query: 149 --AKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGY 322 + +DD D T + + PK+LG + + ++I L+ GPYG Y+QLG+ +K Sbjct: 719 IRGAIVSDTDDPDFVATVEDPDAVMYPKVLGVDPATGKEISLRLGPYGPYLQLGDGKKAK 778 Query: 323 TPKRASVPH-------VKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSI 478 PK+ P KDV+ ITL +A+ + +YP LG HP PV L + G+ + Sbjct: 779 KPKKPPAPRRVGVANIGKDVNKITLAEAIGMFEYPKVLGVHPVTQAPVSLNIGPFGWYV 837 [45][TOP] >UniRef100_B8EMQ0 DNA topoisomerase n=1 Tax=Methylocella silvestris BL2 RepID=B8EMQ0_METSB Length = 977 Score = 99.8 bits (247), Expect = 1e-19 Identities = 59/172 (34%), Positives = 91/172 (52%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CPSC EG L K+ +FGA FIGC +P CK+ +TL + D + + Sbjct: 602 RGCPSCGEGKLSLKLGKFGA--FIGCSNYPECKF-TRTLAAPDGAEANGGERPGV----- 653 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG + S E+I L+ G +G+YVQ GE K PKR+S+P +TLE A+ LL Sbjct: 654 KSLGVDPDSGEEITLRDGRFGVYVQQGEGEK---PKRSSLPPTIAPADLTLEQAIALLSL 710 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 P + +HP+ P++ + + G +++ A V K+ I +A++L+ Sbjct: 711 PREVARHPESKEPIVAGIGRYGPYVQHGKTYANVAKDEDIISIGANRAIDLI 762 [46][TOP] >UniRef100_Q1H4T9 DNA topoisomerase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H4T9_METFK Length = 845 Score = 99.0 bits (245), Expect = 2e-19 Identities = 61/176 (34%), Positives = 88/176 (50%), Gaps = 2/176 (1%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229 CP C + L ++ RFG FIGC +P C YI P N EP + Sbjct: 587 CPKCGK-PLQSRLGRFGK--FIGCSGYPECDYIRN-------------PNANANNNEPTV 630 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLG--EDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 +G S + ILL +GPYG Y+Q+G E PKR S+P V S+ +E AL L+ Sbjct: 631 IGQEPESGKDILLLNGPYGPYLQIGLPEADSKKKPKRVSIPKEIPVSSLDMETALKLIAL 690 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLSGNN 571 P LG+HP+ G V+ + + G + + K +PK+ +I L +A+ELL+ N Sbjct: 691 PRDLGQHPETGKKVVANIGRFGPYVNHDGKFKSIPKSESVFDIDLARAIELLAQAN 746 [47][TOP] >UniRef100_A7IM95 DNA topoisomerase n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IM95_XANP2 Length = 901 Score = 98.2 bits (243), Expect = 4e-19 Identities = 56/173 (32%), Positives = 91/173 (52%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C G L K+ +FGA FIGC +P C++ + D E D ++ Sbjct: 603 RLCPTCGNGRLSLKMGKFGA--FIGCSNYPECRHTRPL--TGDGAPEGDGKRE------- 651 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 LG + S E + +++G +G Y+QLGE + G PKR+S+P + LE AL LL Sbjct: 652 --LGIDPESGEDVTIRAGRFGTYLQLGEGKDGEKPKRSSLPKGLAPADVDLETALKLLAL 709 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +GKHP+DG P++ + + G +++ A + I L +A+ L++ Sbjct: 710 PREVGKHPEDGEPILAGIGRYGPYVQHGRTYANIEDGDDILAIGLNRAVVLIA 762 [48][TOP] >UniRef100_A8TLB9 DNA topoisomerase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLB9_9PROT Length = 893 Score = 98.2 bits (243), Expect = 4e-19 Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 4/191 (2%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A + F + PD + R CPSC G L ++ +FGA FIGC +P C++ T + Sbjct: 588 ELATHFFANGPDGAPDRGCPSCDGGRLSLRLGKFGA--FIGCSNYPNCRF---TRQLGEA 642 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG--YTPKRASVPH 349 + + PK+LG + + +++ L+ GPYG+YVQLGE +G PKRAS+P Sbjct: 643 AGGKSNGADGEEMNLPKVLGTDPETGQEVSLRKGPYGVYVQLGEPPEGSKEKPKRASLPR 702 Query: 350 VKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNE 529 + L L LL P +G HP+ G + + + G ++Y +P + Sbjct: 703 QLPPADVDLPKGLSLLSLPRPIGDHPETGTKIEAGIGRYGPYLKYDSVYVNLPPDDTVLT 762 Query: 530 ITLEKALELLS 562 I L A+EL++ Sbjct: 763 IGLNHAVELIA 773 [49][TOP] >UniRef100_B1ZKT9 DNA topoisomerase n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZKT9_METPB Length = 909 Score = 97.8 bits (242), Expect = 5e-19 Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 3/175 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C G L K+ +FGA FIGC +P CKY + L +S + E D Sbjct: 602 RACPTCGSGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVEGEGDGSSAEGGQPGV 658 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + + + L+ G +G +VQLGE ++ PKR+S+P S+TLE AL L Sbjct: 659 RVLGDDPATGLPVTLRDGRFGPFVQLGEASSEKGAEKPKRSSLPKGTSPGSVTLEIALRL 718 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 L P + KHP+ G P++ + + G +++ A + K+ EI +A++L+ Sbjct: 719 LSLPREVAKHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRAIDLI 773 [50][TOP] >UniRef100_Q6G3F7 DNA topoisomerase n=1 Tax=Bartonella henselae RepID=Q6G3F7_BARHE Length = 853 Score = 97.4 bits (241), Expect = 7e-19 Identities = 57/173 (32%), Positives = 93/173 (53%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP CT G L K+ R+GA F+GC +P CKY T D EE+ +N +EP Sbjct: 604 RSCPLCTNGQLSLKLGRYGA--FVGCSNYPECKY---TRQLGTDPGEENEAIRN---DEP 655 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 +LG + + + + L++G +G Y+QLGE ++ KRA +P + ITLE AL L+ Sbjct: 656 VILGVDPKTGKDVTLRNGRFGPYIQLGESKEA---KRAGLPKEWQAEKITLEKALSLISL 712 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+ G + + + G + + K A + + +I + +A+ +L+ Sbjct: 713 PREIGIHPETGKTITATIGRYGPYLTHDGKYAPLLNVDEVFDIGINRAVTVLA 765 [51][TOP] >UniRef100_Q2RPE8 DNA topoisomerase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPE8_RHORT Length = 915 Score = 97.4 bits (241), Expect = 7e-19 Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 6/179 (3%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 RVCP C+ G L ++ +FGA F+GC +P CK+ + + + ++ T Sbjct: 608 RVCPVCSAGRLGLRIGKFGA--FVGCSNYPDCKFTRPLVTKEGEGGDGAALAEDGT---- 661 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE------DRKGYTPKRASVPHVKDVDSITLEDA 385 K LG + S E + L+ GPYG+YVQ GE +K P R S+P D +I L+ A Sbjct: 662 KPLGKDPVSGEDVTLRKGPYGLYVQKGEAAPVEKGKKAVKPPRVSIPKDMDAATIDLDIA 721 Query: 386 LVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L LL P +G HP+ G + + + G I++ D +PK+ I L +A+ LL+ Sbjct: 722 LKLLSLPRPVGDHPETGTMISAGIGRFGPYIKHGDIYKSLPKDDDVLTIGLNRAVSLLA 780 [52][TOP] >UniRef100_B9KNS1 DNA topoisomerase n=2 Tax=Rhodobacter sphaeroides RepID=B9KNS1_RHOSK Length = 884 Score = 97.4 bits (241), Expect = 7e-19 Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 3/188 (1%) Frame = +2 Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 A +L+ PD S R+CP+C G L K +R G G FIGC +P C+Y + D++ Sbjct: 579 APHLYPPRPDGSDPRICPTCGSGRLHLKTAR-GGGAFIGCGNYPDCRYTRPISVTGDEE- 636 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKD 358 N + KLLG + I L+SG +G YVQ GE + P RAS+P Sbjct: 637 -------NAISPDGKLLGHDE-DGAPISLRSGRFGPYVQKGEVTAEVPKPPRASLPKGWA 688 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 D++ L+ AL+LL P +G HP+DG PV + + G +++ A +P + I + Sbjct: 689 PDTVDLDRALMLLNLPRLVGSHPEDGQPVEAAIGRYGPYVKHGSTYANLPDVEEVFTIGM 748 Query: 539 EKALELLS 562 +A+E+L+ Sbjct: 749 NRAVEVLA 756 [53][TOP] >UniRef100_A3PHZ5 DNA topoisomerase n=1 Tax=Rhodobacter sphaeroides ATCC 17029 RepID=A3PHZ5_RHOS1 Length = 884 Score = 97.4 bits (241), Expect = 7e-19 Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 3/188 (1%) Frame = +2 Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 A +L+ PD S R+CP+C G L K +R G G FIGC +P C+Y + D++ Sbjct: 579 APHLYPPRPDGSDPRICPTCGSGRLHLKTAR-GGGAFIGCGNYPDCRYTRPISVTGDEE- 636 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKD 358 N + KLLG + I L+SG +G YVQ GE + P RAS+P Sbjct: 637 -------NAISPDGKLLGHDE-DGAPISLRSGRFGPYVQKGEVTAEVPKPPRASLPKGWA 688 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 D++ L+ AL+LL P +G HP+DG PV + + G +++ A +P + I + Sbjct: 689 PDTVDLDRALMLLNLPRLVGSHPEDGQPVEAAIGRYGPYVKHGSTYANLPDVEEVFTIGM 748 Query: 539 EKALELLS 562 +A+E+L+ Sbjct: 749 NRAVEVLA 756 [54][TOP] >UniRef100_C5SMZ1 DNA topoisomerase n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SMZ1_9CAUL Length = 873 Score = 97.4 bits (241), Expect = 7e-19 Identities = 63/183 (34%), Positives = 90/183 (49%), Gaps = 6/183 (3%) Frame = +2 Query: 32 PDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTP 196 PDK R CP+C G L K SRFGA F+GC +P CKY + Sbjct: 588 PDKGDGSNPRACPTCGTGQLSLKTSRFGA--FVGCSNYPECKYTRPV-------GNPENA 638 Query: 197 QQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSIT 373 + + LG + + + + LK G +G YVQLGE + K PKR+S+P SI Sbjct: 639 SEVAAASGDRELGRDPETGKVVALKIGRFGPYVQLGEAESKDDKPKRSSLPKAWPPASID 698 Query: 374 LEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALE 553 L+ AL LL P +G HP+DG P+ + + G I + A +P + E+ L +A+ Sbjct: 699 LDRALKLLSLPRKVGDHPEDGKPITAALGRFGPFIEHEKTYANLPSFDEIFEVGLNRAVV 758 Query: 554 LLS 562 LL+ Sbjct: 759 LLA 761 [55][TOP] >UniRef100_C5AYF9 DNA topoisomerase n=1 Tax=Methylobacterium extorquens AM1 RepID=C5AYF9_METEA Length = 910 Score = 97.1 bits (240), Expect = 9e-19 Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 3/175 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C G L K+ +FGA FIGC +P CKY + L +S + E D Sbjct: 602 RACPTCGAGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVEGEGDGSSAEGGQPGV 658 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + + + L+ G +G +VQLGE ++ PKR+S+P S+TLE AL L Sbjct: 659 RVLGDDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPKGTTPGSVTLEIALRL 718 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 L P + KHP+ G P++ + + G +++ A + K+ EI +A++L+ Sbjct: 719 LSLPREVAKHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRAIDLI 773 [56][TOP] >UniRef100_B7KW94 DNA topoisomerase n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KW94_METC4 Length = 910 Score = 97.1 bits (240), Expect = 9e-19 Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 3/175 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C G L K+ +FGA FIGC +P CKY + L +S + E D Sbjct: 602 RACPTCGAGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVEGEGDGSSAEGGQPGV 658 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + + + L+ G +G +VQLGE ++ PKR+S+P S+TLE AL L Sbjct: 659 RVLGDDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPKGMTPGSVTLEIALRL 718 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 L P + KHP+ G P++ + + G +++ A + K+ EI +A++L+ Sbjct: 719 LSLPREVAKHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRAIDLI 773 [57][TOP] >UniRef100_B0UIR7 DNA topoisomerase n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UIR7_METS4 Length = 913 Score = 97.1 bits (240), Expect = 9e-19 Identities = 55/175 (31%), Positives = 94/175 (53%), Gaps = 3/175 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C GTL K+ +FGA F+GC +P CKY + + D D E + + Sbjct: 602 RACPNCAGGTLSLKLGKFGA--FVGCSNYPECKYTRQLSAAGLDGDGEGSAGEGGQ-PGV 658 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + + + L+ G +G +VQLGE ++ PKR+S+P +TLE AL L Sbjct: 659 RVLGEDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPRGLTPADVTLETALKL 718 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 L P + +HP+ G P+++ + + G +++ A + K+ EI +A++L+ Sbjct: 719 LALPREVARHPESGEPILVNLGRFGPYVQHGKTYANLGKDDDLLEIGANRAIDLI 773 [58][TOP] >UniRef100_A9W733 DNA topoisomerase n=1 Tax=Methylobacterium extorquens PA1 RepID=A9W733_METEP Length = 910 Score = 97.1 bits (240), Expect = 9e-19 Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 3/175 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C G L K+ +FGA FIGC +P CKY + L +S + E D Sbjct: 602 RACPTCGAGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVEGEGDGSSAEGGQPGV 658 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + + + L+ G +G +VQLGE ++ PKR+S+P S+TLE AL L Sbjct: 659 RVLGEDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPKGMTPGSVTLEIALRL 718 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 L P + KHP+ G P++ + + G +++ A + K+ EI +A++L+ Sbjct: 719 LSLPREVAKHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRAIDLI 773 [59][TOP] >UniRef100_C7CD03 DNA topoisomerase n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CD03_METED Length = 910 Score = 97.1 bits (240), Expect = 9e-19 Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 3/175 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C G L K+ +FGA FIGC +P CKY + L +S + E D Sbjct: 602 RACPTCGAGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVEGEGDGSSAEGGQPGV 658 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + + + L+ G +G +VQLGE ++ PKR+S+P S+TLE AL L Sbjct: 659 RVLGDDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPKGMTSGSVTLEIALRL 718 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 L P + KHP+ G P++ + + G +++ A + K+ EI +A++L+ Sbjct: 719 LSLPREVAKHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRAIDLI 773 [60][TOP] >UniRef100_C6ADW8 DNA topoisomerase n=1 Tax=Bartonella grahamii as4aup RepID=C6ADW8_BARGA Length = 857 Score = 96.7 bits (239), Expect = 1e-18 Identities = 56/173 (32%), Positives = 93/173 (53%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP C G L K+ R+GA F+GC +P CKY T D EE+ +N +EP Sbjct: 604 RSCPLCKNGQLSLKLGRYGA--FVGCSNYPECKY---THQLGTDTGEENEAVRN---DEP 655 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 +LG + + + I L++G +G Y+QLGE ++ KRA +P +++TL+ AL LL Sbjct: 656 VILGIDPETGKDISLRNGRFGPYIQLGESKE---VKRAGLPKEWQAENVTLDKALALLSL 712 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+ G + + + G + + K A + + +I + +A+ +L+ Sbjct: 713 PREIGVHPESGKTITATIGRYGPYLSHNGKSARLLHADEVFDIGINRAVTVLA 765 [61][TOP] >UniRef100_C6X8M3 DNA topoisomerase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X8M3_METSD Length = 858 Score = 96.3 bits (238), Expect = 2e-18 Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 2/178 (1%) Frame = +2 Query: 35 DKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTI 214 D CP C + L ++ RFG FIGC +P C YI +T Sbjct: 584 DIGEACPKCGK-PLHSRLGRFGK--FIGCSGYPECDYI------------RNTGSNAAAS 628 Query: 215 EEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT--PKRASVPHVKDVDSITLEDAL 388 EP ++G ++ S++ ILL +GPYG Y+QLG +G PKR S+P + ++ LE A+ Sbjct: 629 SEPVVMGHDAASDKDILLLNGPYGPYLQLGLPEEGSKKKPKRVSIPKEIPLANVDLEVAM 688 Query: 389 VLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L+ P LG+HP+ G ++ + + G + + K +P++ +I L +A+ELL+ Sbjct: 689 KLIALPRDLGQHPETGKKIVANIGRFGPYVNHDGKFKSIPRSDSVFDIDLPRAVELLA 746 [62][TOP] >UniRef100_A0NTN3 DNA topoisomerase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NTN3_9RHOB Length = 887 Score = 96.3 bits (238), Expect = 2e-18 Identities = 59/173 (34%), Positives = 89/173 (51%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CPSC G L KVSR+GA FIGC +P C + + S +D E D + P Sbjct: 609 RKCPSCDSGQLSLKVSRWGA--FIGCSNYPECGFTRQLGKPSGEDGEGD--------DGP 658 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K+LG + + + L+ G +G YVQLGE+ K PKRAS+P + LE AL LL Sbjct: 659 KVLGTDPETGLDVSLRKGRFGPYVQLGEEAK---PKRASLPRGWSAPDMDLEKALQLLSL 715 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+DG + + + G + + A + + + + +A++ L+ Sbjct: 716 PREVGPHPEDGKMITAGIGRYGPFVLHEGTYANLSTADEVFSVGINRAVDALA 768 [63][TOP] >UniRef100_A9GZQ5 DNA topoisomerase n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9GZQ5_GLUDA Length = 924 Score = 95.9 bits (237), Expect = 2e-18 Identities = 61/190 (32%), Positives = 100/190 (52%), Gaps = 5/190 (2%) Frame = +2 Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 A + F + PD S RVC +C G L K+ R+GA FIGC +P C++ + + +D Sbjct: 592 APHFFPAHPDGSDPRVCTACGTGRLGLKLGRYGA--FIGCSNYPTCQFTRRLVVDPKEDG 649 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHV 352 E DT + +LLG G E + ++ GP+G+YVQ GE + K P+RA++P Sbjct: 650 EADTLKDGM-----RLLGQTPGG-EDVTVRRGPWGLYVQQGEPDPEDKKAKPRRATIPRG 703 Query: 353 KDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEI 532 + D ITL+ AL LL P +G HP+ G + + + G ++ + K+ + Sbjct: 704 IEGDKITLDQALGLLSLPRVVGIHPETGEQIEAGLGRFGPYVKMGAVYGSLDKDDDILTV 763 Query: 533 TLEKALELLS 562 L +A+++L+ Sbjct: 764 GLNRAVDVLA 773 [64][TOP] >UniRef100_B8IL44 DNA topoisomerase n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IL44_METNO Length = 888 Score = 95.5 bits (236), Expect = 3e-18 Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 3/175 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C GTL K+ +FGA F+GC +P CKY + L ++ + E D Sbjct: 602 RACPNCASGTLSLKLGKFGA--FVGCSNYPECKY-TRQLSAAGVEGEGDGSSGEGGQPGQ 658 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + + + L+ G +G +VQLGE ++ PKR+S+P ++LE AL L Sbjct: 659 RVLGEDPATGLPVTLREGRFGPFVQLGEASAEKGAEKPKRSSLPRGLSPAEVSLETALKL 718 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 L P + +HP+ G P+++ + + G +++ A + K EI +A++L+ Sbjct: 719 LALPREVARHPETGEPILVNLGRFGPYVQHGKTYANLGKGDDLLEIGANRAIDLI 773 [65][TOP] >UniRef100_Q0BU00 DNA topoisomerase n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BU00_GRABC Length = 909 Score = 95.1 bits (235), Expect = 3e-18 Identities = 56/175 (32%), Positives = 93/175 (53%), Gaps = 2/175 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C +G L ++ R G+ FIGC +P C Y + + + E T E Sbjct: 615 RICPACGDGRLGLRLGRHGS--FIGCSNYPGCSYTRRLGIDGAEGEAE------TLKEGM 666 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT--PKRASVPHVKDVDSITLEDALVLL 397 ++LG + + E I +K GPYG+YVQ GE +G P+RAS+P D ++I L+ AL LL Sbjct: 667 RVLGQHPETGEDITVKRGPYGLYVQQGEAEEGSKKKPRRASLPRGVDGETILLDQALGLL 726 Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+ G P+ + + G ++ + K+ + L +A+++L+ Sbjct: 727 SLPRLVGIHPETGEPIEANLGRFGPYVKMGGIYGNLDKDDDVLTVGLNRAVDVLA 781 [66][TOP] >UniRef100_Q0BZX2 DNA topoisomerase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZX2_HYPNA Length = 859 Score = 94.7 bits (234), Expect = 4e-18 Identities = 54/154 (35%), Positives = 81/154 (52%) Frame = +2 Query: 23 GSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQ 202 G+ + R CP C EG L K+ +FGA F+GC +HP CKY + +SS+ D P Sbjct: 590 GNPIENPRQCPLCKEGELSMKLGKFGA--FVGCSRHPECKYTRQ--FSSEGGDAAINPDG 645 Query: 203 NTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLED 382 N +G + + ILLKSG +G YV++ K PKRAS+ + +TLE Sbjct: 646 NE-------IGIHPDTGAMILLKSGRFGPYVEMANGEK---PKRASLAKADNAAELTLER 695 Query: 383 ALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRY 484 A+ LL P +G HP+DG ++ + G +++ Sbjct: 696 AVELLSLPREVGPHPEDGEMILANFGRFGPYVQH 729 [67][TOP] >UniRef100_A9IU35 DNA topoisomerase n=1 Tax=Bartonella tribocorum CIP 105476 RepID=A9IU35_BART1 Length = 858 Score = 94.7 bits (234), Expect = 4e-18 Identities = 55/173 (31%), Positives = 94/173 (54%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP C G L K+ R+GA F+GC +P C+Y + + D +EE+ +N +EP Sbjct: 604 RSCPLCKNGQLSLKLGRYGA--FVGCSNYPECRYTRQL--GTTDTEEENEAVRN---DEP 656 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 +LG + + + I L++G +G Y+Q GE ++ KRA +P ++ITLE AL LL Sbjct: 657 VMLGIDPETGKDISLRNGRFGPYIQRGESKE---VKRAGLPKEWQAENITLERALALLSL 713 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+ G + + + G + + K A + + +I + +A+ +L+ Sbjct: 714 PREIGIHPETGKMITATIGRYGPYLSHNGKSARLLHADEVFDIGINRAVTVLA 766 [68][TOP] >UniRef100_Q6N559 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris RepID=Q6N559_RHOPA Length = 911 Score = 94.4 bits (233), Expect = 6e-18 Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CPSC G L K +FGA F+GC +P C+Y S D + Sbjct: 603 RQCPSCGTGKLNLKAGKFGA--FVGCSNYPECRYTRPLASDSAGDAD------------- 647 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + S ++ +KSG +G Y+QLGE + +G PKRA +P + LE AL L Sbjct: 648 RVLGTDPDSGLEVAVKSGRFGPYIQLGEAKDYAEGEKPKRAGIPKGTSPSDVDLEMALKL 707 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +GKHP+ G P+ + + G +++ A + + I L +A+ L++ Sbjct: 708 LALPREVGKHPETGQPIKAGIGRFGPYVQHEKTYASLEAGDDVHTIGLNRAVTLIA 763 [69][TOP] >UniRef100_B5ZK59 DNA topoisomerase n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZK59_GLUDA Length = 924 Score = 94.4 bits (233), Expect = 6e-18 Identities = 61/189 (32%), Positives = 99/189 (52%), Gaps = 3/189 (1%) Frame = +2 Query: 5 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 184 F +L GS P RVC +C G L K+ R+GA FIGC +P C++ + + +D E Sbjct: 596 FPAHLDGSDP---RVCTACGTGRLGLKLGRYGA--FIGCSNYPTCQFTRRLVVDPKEDGE 650 Query: 185 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVK 355 DT + +LLG G E + ++ GP+G+YVQ GE + K P+RA++P Sbjct: 651 ADTLKDGM-----RLLGQTPGG-EDVTVRRGPWGLYVQQGEPDPEDKKAKPRRATIPRGI 704 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 + D ITL+ AL LL P +G HP+ G + + + G ++ + K+ + Sbjct: 705 EGDKITLDQALGLLSLPRVVGIHPETGEQIEAGLGRFGPYVKMGAVYGSLDKDDDILTVG 764 Query: 536 LEKALELLS 562 L +A+++L+ Sbjct: 765 LNRAVDVLA 773 [70][TOP] >UniRef100_B2IEN4 DNA topoisomerase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IEN4_BEII9 Length = 961 Score = 94.0 bits (232), Expect = 7e-18 Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 2/184 (1%) Frame = +2 Query: 14 YLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187 Y+F D S R CPSC G L K+ +FG+ FIGC +P CK+ + + Sbjct: 590 YIFPDKGDGSNPRACPSCANGQLSLKLGKFGS--FIGCSNYPECKFTRTLSDTGPEGGNG 647 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367 +T + K+LG ++ + E+I L+ G +G YVQ GE K PKRAS+P Sbjct: 648 ETDRPGV-----KVLGVDAETGEEISLRDGRFGAYVQRGEGEK---PKRASLPKTIAPAD 699 Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547 +TL+ AL LL P + +HP+ P++ + + G +++ A + K+ + +A Sbjct: 700 LTLDMALGLLSLPREVARHPETHEPILAGIGRFGPYVQHGKTYANIGKDEDILTLGANRA 759 Query: 548 LELL 559 ++L+ Sbjct: 760 IDLI 763 [71][TOP] >UniRef100_UPI0000382C8D COG1754: Uncharacterized C-terminal domain of topoisomerase IA n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382C8D Length = 349 Score = 93.6 bits (231), Expect = 1e-17 Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 3/173 (1%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229 CP+C L K+ +FGA FIGC +P CKY + L +S + E D ++ Sbjct: 50 CPTCGSAQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVEGEGDGSSAEGGQPGVRV 106 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 LG + + + L+ G +G +VQLGE ++ PKR+S+P S+TLE AL LL Sbjct: 107 LGDDPATGLPVTLRDGRFGPFVQLGEASSEKGAEKPKRSSLPKGMTPSSVTLEIALRLLS 166 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 P + KHP+ G P++ + + G +++ A + K+ EI +A++L+ Sbjct: 167 LPREVAKHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRAIDLI 219 [72][TOP] >UniRef100_Q5FRH2 DNA topoisomerase n=1 Tax=Gluconobacter oxydans RepID=Q5FRH2_GLUOX Length = 898 Score = 93.6 bits (231), Expect = 1e-17 Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 5/188 (2%) Frame = +2 Query: 14 YLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187 + F PD + RVC SC G L ++ +FGA FIGC +P C++ + + +E Sbjct: 591 HFFPPRPDGADPRVCTSCGTGRLGLRLGKFGA--FIGCSNYPTCQFTRRLVA-----EEG 643 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKD 358 DT N + PK+LG + + E + ++ GPYG+Y+Q GE + K PKR ++P D Sbjct: 644 DTEGLN---DGPKVLGQDPETGEDVTIRRGPYGLYIQRGEPNPEDKKAKPKRTTIPKGLD 700 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 +++TLE AL LL P +G HP+ G + + + G ++ + K+ + L Sbjct: 701 GNTMTLEQALGLLSLPRLVGLHPETGEKIEAGLGRFGPYVKMGAIYGTLDKDDDVLTVGL 760 Query: 539 EKALELLS 562 +A++ L+ Sbjct: 761 NRAVDALA 768 [73][TOP] >UniRef100_A1AZS7 DNA topoisomerase n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1AZS7_PARDP Length = 851 Score = 93.2 bits (230), Expect = 1e-17 Identities = 66/192 (34%), Positives = 101/192 (52%), Gaps = 3/192 (1%) Frame = +2 Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 A +L+ D S R CP C +G L K +R G G FIGC +P C++ + + S D + Sbjct: 576 APHLYPPRADGSDPRECPLCHKGRLHLKTARSG-GAFIGCSNYPDCRF-TRPISSPDAEV 633 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKD 358 D +LG ++G ++I LK+G +G YVQ GE + P RAS+P D Sbjct: 634 VGDA-----------VLGVDNG--DEISLKNGRFGPYVQRGEATAENPKPPRASIPKGWD 680 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538 + S+ LE AL LL P +G HP+DG PV + + G +++ K A +P + I + Sbjct: 681 LASVDLERALALLSLPREIGSHPEDGVPVEAGIGRYGPYVKHGAKYANLPDVDEVFTIGM 740 Query: 539 EKALELLSGNNV 574 +A+E+L+ V Sbjct: 741 NRAVEVLASKQV 752 [74][TOP] >UniRef100_Q0FZT4 DNA topoisomerase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FZT4_9RHIZ Length = 914 Score = 93.2 bits (230), Expect = 1e-17 Identities = 59/173 (34%), Positives = 88/173 (50%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP C G L K+ R+GA F+GC +P C + + S D E P Sbjct: 611 RACPRCGNGKLSLKLGRYGA--FVGCSNYPECNFTRQLGTSLAVDSSEAGDDDG-----P 663 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 + LG + + E I L++G +G YVQ GE ++ R SVP +V SI LE AL LL Sbjct: 664 RELGNDPETGEPITLRTGRFGPYVQRGEGKEA---SRTSVPKGWEVGSIDLEKALKLLTL 720 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +GKHP+DG P+I+ + + G +++ A V E+ +A+ L++ Sbjct: 721 PREVGKHPEDGEPMIVNLGRYGPYVQHLKTYANVESVEDLFEMGPNRAVSLIA 773 [75][TOP] >UniRef100_C5V0V2 DNA topoisomerase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0V2_9PROT Length = 872 Score = 93.2 bits (230), Expect = 1e-17 Identities = 66/181 (36%), Positives = 90/181 (49%), Gaps = 6/181 (3%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229 CP C + L K+SR+G+ FI C +P CKY Q+ +E Sbjct: 586 CPECGK-PLAKKLSRYGS--FISCTNYPECKYKRSV---------GGETQEEVRVE---- 629 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT--PKRASVPHVKDVDSITLEDALVLLQY 403 LG + S + +LL GPYG YVQLGE +G PKR S P VD LE AL LL Sbjct: 630 LGVHPESAQAVLLLRGPYGHYVQLGEVIEGEKAKPKRVSWPKEMAVDQADLESALKLLSL 689 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS----GNN 571 P LG HP+ VI+ + + G I + K +P+ ++TL++A+ELL+ GN Sbjct: 690 PKDLGLHPETNKKVIVNIGRFGPYIGHDGKFKSIPRTDSIFDVTLDRAVELLAQAKDGNT 749 Query: 572 V 574 V Sbjct: 750 V 750 [76][TOP] >UniRef100_A4TWS2 DNA topoisomerase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWS2_9PROT Length = 886 Score = 93.2 bits (230), Expect = 1e-17 Identities = 59/173 (34%), Positives = 86/173 (49%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP C G L K+ +FGA FIGC +P C+Y + + + P + P Sbjct: 606 RLCPLCNAGRLSLKLGKFGA--FIGCANYPECRYTRPLAVAGEGGEGGGEPLP----DGP 659 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG GS E + L+ GPYG YVQLGE G PKR S+ + +I LE L LL Sbjct: 660 KELGIEPGSGEPVTLRKGPYGWYVQLGE---GAKPKRVSLYKGLEPGAIDLEIGLKLLAL 716 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G+HP+ + V + G + + + K+ + + +A+ELLS Sbjct: 717 PRDVGEHPETRKMIKAGVGRFGPYLLHDGVYKSLAKDDDVLTVGMNRAVELLS 769 [77][TOP] >UniRef100_Q2G7D0 DNA topoisomerase n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G7D0_NOVAD Length = 859 Score = 92.4 bits (228), Expect = 2e-17 Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 4/189 (2%) Frame = +2 Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLY--SSDD 175 +DYLF D + R+CP C EG L + R+GA F+ C +P CKY K +D Sbjct: 574 SDYLFPPRADGTDPRLCPKCEEGRLSLRGGRYGA--FVACSNYPECKYTRKFAQPGGADG 631 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 D ED LG + + +++ K+G +G Y+QLG+ ++ KRAS+P K Sbjct: 632 DGGEDGA-----------LGKDPETGLEVVRKAGRFGPYIQLGDGKEA---KRASIP--K 675 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 D+ + LE AL LL P +G HP+ G+P+ + + G + + K A + + E Sbjct: 676 DIGELDLEWALKLLSLPREVGVHPETGNPITASIGRYGPYLAHDGKYARLKSTAEVFETG 735 Query: 536 LEKALELLS 562 + A+ LL+ Sbjct: 736 MNAAVMLLA 744 [78][TOP] >UniRef100_A5AWM5 DNA topoisomerase n=1 Tax=Vitis vinifera RepID=A5AWM5_VITVI Length = 1039 Score = 92.4 bits (228), Expect = 2e-17 Identities = 39/47 (82%), Positives = 42/47 (89%) Frame = +2 Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCK 142 KF D+LF LPDKSR CPSC EGTLIFKVSRFG+GYFIGCDQHP+CK Sbjct: 993 KFGDFLFSFLPDKSRTCPSCMEGTLIFKVSRFGSGYFIGCDQHPKCK 1039 [79][TOP] >UniRef100_Q89K08 DNA topoisomerase n=1 Tax=Bradyrhizobium japonicum RepID=Q89K08_BRAJA Length = 828 Score = 92.0 bits (227), Expect = 3e-17 Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CPSC G L K +FGA F+GC +P C+Y + D E T ++ Sbjct: 602 RQCPSCGNGRLNLKAGKFGA--FVGCSNYPECRYTRQLAA-----DSEATADRS------ 648 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394 LG + + + +K+G +G Y+QLGE + +G PKRA +P + LE AL L Sbjct: 649 --LGQDPDTGRDVWVKAGRFGPYIQLGEQKDYEEGEKPKRAGIPKGTSPGDVELELALKL 706 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +GKHP+ G P+ + + G +++ A + + +I L +A+ L++ Sbjct: 707 LSLPREIGKHPETGQPITAGLGRFGPFVKHEKTYASLEAGDEVFDIGLNRAVTLIA 762 [80][TOP] >UniRef100_A8I2E5 DNA topoisomerase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I2E5_AZOC5 Length = 892 Score = 92.0 bits (227), Expect = 3e-17 Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 2/185 (1%) Frame = +2 Query: 14 YLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187 +LF + D S R+CP+C G L K+ +FGA FIGC +P C+Y + L + + Sbjct: 591 HLFPAKEDGSDPRLCPTCGSGRLSLKMGKFGA--FIGCSNYPECRY-TRPLSGGEGEAGG 647 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367 D ++ LG + + ++ L+ G +G Y+QLGE G PKR+S+P Sbjct: 648 DGVRK---------LGTDPETGLEVTLRDGRFGAYLQLGEAVDGEKPKRSSLPKGLAPAD 698 Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547 + LE AL LL P +G HP+DG P++ + + G I++ A + + L +A Sbjct: 699 VDLETALALLALPRRVGTHPEDGEPILAGIGRFGPYIQHGKVYANLEAADDVLTVGLNRA 758 Query: 548 LELLS 562 + LL+ Sbjct: 759 VVLLA 763 [81][TOP] >UniRef100_Q135I0 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Q135I0_RHOPS Length = 914 Score = 91.3 bits (225), Expect = 5e-17 Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CPSC G L K +FGA F+GC +P C++ D + Sbjct: 603 RQCPSCGTGRLNLKAGKFGA--FVGCSNYPECRHTRPLAADGGGGDAD------------ 648 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + + ++ +KSG +G Y+QLGE + +G PKRA +P + LE AL L Sbjct: 649 RVLGIDPDTGFEVAVKSGRFGPYIQLGEAKDYAEGEKPKRAGIPKGTSPSDVELEMALRL 708 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +GKHP+ G P+ + + G +++ A + + I L +A+ L++ Sbjct: 709 LALPREVGKHPETGEPIKAGIGRFGPYVQHEKTYASLEAGDDVHNIGLNRAVTLIA 764 [82][TOP] >UniRef100_B1M0P4 DNA topoisomerase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M0P4_METRJ Length = 894 Score = 91.3 bits (225), Expect = 5e-17 Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 8/184 (4%) Frame = +2 Query: 32 PDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTP 196 PDK R CP+C G L K+ +FGA FIGC +P CKY + L ++ D + D Sbjct: 593 PDKGDGSNPRTCPTCGSGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSATGIDGDGDGS 649 Query: 197 QQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDS 367 ++LG + + + L+ G +G ++QLGE ++ PKR+S+P Sbjct: 650 SAEGGQPGVRVLGDDPATGLPVTLRDGRFGPFLQLGEASTEKGAEKPKRSSLPKGLSPSD 709 Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547 + L AL LL P + +HP+ G P++ + + G +++ A + K+ EI +A Sbjct: 710 VDLNKALALLALPREVARHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRA 769 Query: 548 LELL 559 ++L+ Sbjct: 770 IDLI 773 [83][TOP] >UniRef100_B9QWJ1 DNA topoisomerase n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QWJ1_9RHOB Length = 913 Score = 91.3 bits (225), Expect = 5e-17 Identities = 55/173 (31%), Positives = 91/173 (52%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C G L KVSR+GA FIGC+ +P C Y + S ++ E D + P Sbjct: 609 RKCPACDTGKLSLKVSRWGA--FIGCENYPECGYTRQLGKPSGEEGEAD--------DGP 658 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K+ G + + ++ L++G +G YVQLG + K PKR+S+P + LE AL LL Sbjct: 659 KVFGEDPETGMEVSLRTGRFGPYVQLGNEAK---PKRSSLPKGWSAADMDLEKALQLLSL 715 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G+HP+DG + + + G + + A + + + + +A++ L+ Sbjct: 716 PREVGEHPEDGKMITAGLGRYGPFVLHDGTYANLSSPDEVFSVGINRAVDALA 768 [84][TOP] >UniRef100_B3Q9Y2 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris TIE-1 RepID=B3Q9Y2_RHOPT Length = 911 Score = 90.9 bits (224), Expect = 6e-17 Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CPSC G L K +FGA F+GC +P C+Y D + Sbjct: 603 RQCPSCGNGRLNLKAGKFGA--FVGCTNYPECRYTRPLAADGGADAD------------- 647 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + + ++ +KSG +G Y+QLGE + +G PKRA +P + L+ AL L Sbjct: 648 RVLGTDPDTGLEVAVKSGRFGPYIQLGEAKDYGEGEKPKRAGIPKGTSPSDVELDVALKL 707 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +GKHP+ G P+ + + G +++ A + + I L +A+ L++ Sbjct: 708 LALPREVGKHPESGQPIKAGIGRFGPYVQHEKTYASLEAGDDVHTIGLNRAVTLIA 763 [85][TOP] >UniRef100_B9KIC6 DNA topoisomerase n=2 Tax=Anaplasma marginale RepID=B9KIC6_ANAMF Length = 813 Score = 90.5 bits (223), Expect = 8e-17 Identities = 58/180 (32%), Positives = 95/180 (52%) Frame = +2 Query: 23 GSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQ 202 G + D+S CP C EG L+ + ++ A F+GC+++P CKY S +E Sbjct: 594 GEVVDRS--CPGCGEGELMLNIGKYKA--FLGCNRYPECKYTRGIGGESGVCRDEF---- 645 Query: 203 NTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLED 382 PK+LG + + E+I+LK+GPYG Y+QLG++ +G KR +VP + + ITL+ Sbjct: 646 ------PKVLGLDDATQEEIVLKNGPYGEYLQLGDNAQG---KRVAVP--QGIQEITLDV 694 Query: 383 ALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 A LL P+ LG +P + L + G + Y V +TLE+A+++++ Sbjct: 695 AKKLLSLPIVLGNYPDTAQDIKLGTGRFGPYVLYGGTYFSVKGREDFWNLTLEEAVDVIN 754 [86][TOP] >UniRef100_A9D533 DNA topoisomerase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D533_9RHIZ Length = 919 Score = 90.5 bits (223), Expect = 8e-17 Identities = 57/173 (32%), Positives = 90/173 (52%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C G L K+ ++GA F+GC +P C + + S+D D D N EP Sbjct: 647 RICPTCGTGNLSLKLGKYGA--FVGCSNYPDCNFTRQL--SADQDASGDAALSN----EP 698 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG + + E I L++G +G YVQ GE ++ KR+S+P VDSI E AL LL Sbjct: 699 KDLGKDPHTEEPITLRTGRFGPYVQRGEGKEA---KRSSLPKGWAVDSIDHEKALALLSL 755 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G+HP+ G + + + G + + A + I L +A+ +++ Sbjct: 756 PRDIGQHPETGKMISAGLGRYGPFVLHEKTYANLESIEDVFSIGLNRAVSVIA 808 [87][TOP] >UniRef100_A3VTI0 DNA topoisomerase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTI0_9PROT Length = 876 Score = 90.5 bits (223), Expect = 8e-17 Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 3/175 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C EG L KV R+GA FIGC ++P CK+ S +Q E Sbjct: 599 RECPTCGEGELSLKVGRYGA--FIGCSRYPECKHTRPLGQS----------EQGNAPAED 646 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 + LG + +++ + LKSG +G YVQLGE D K PKR+S+P D S+ + A+ L Sbjct: 647 RQLGVDPDTSQAVWLKSGRFGPYVQLGEPDPDTKE-KPKRSSIPKSWDAASLDFDKAMKL 705 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 L P +G HP+DG + + + G +++ A + +I + +A+ +L Sbjct: 706 LALPRDVGPHPEDGEMIEASLGRYGPYVKHGKLYANLESIDDVFDIGINRAVAVL 760 [88][TOP] >UniRef100_Q6FZS1 DNA topoisomerase n=1 Tax=Bartonella quintana RepID=Q6FZS1_BARQU Length = 853 Score = 90.1 bits (222), Expect = 1e-16 Identities = 52/173 (30%), Positives = 91/173 (52%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP C+ G L K+ R+GA F+GC +P CKY T D EE +N +EP Sbjct: 604 RSCPLCSSGQLSLKLGRYGA--FVGCSNYPECKY---TRQLGTDPGEEKEVMRN---DEP 655 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 +LG + + + + L++G +G Y+Q+GE ++ KR +P + +TL+ AL L+ Sbjct: 656 VMLGIDPKTGKDVSLRNGRFGPYIQVGEQKEA---KRVRLPKEWQTEKMTLDKALALISL 712 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+ G + + + G + + K A + + +I + +A+ +L+ Sbjct: 713 PREIGIHPETGKIITATIGRYGPYLAHDGKYAPLLHADEIFDIGINRAVTVLA 765 [89][TOP] >UniRef100_Q215Z3 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q215Z3_RHOPB Length = 922 Score = 90.1 bits (222), Expect = 1e-16 Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CPSC G L K +FGA F+GC +P C+Y D + Sbjct: 603 RQCPSCGTGKLNLKAGKFGA--FVGCSNYPECRYTRPLAADGGGDGD------------- 647 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + S ++ +K+G +G Y+QLG+ + +G PKRA +P + LE AL L Sbjct: 648 RILGKDPVSGLEVAVKAGRFGPYIQLGDAKDYAEGEKPKRAGIPKNSSPGDMELELALKL 707 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +GKHP+ G P+ + + G +++ A + + +I L +A+ L++ Sbjct: 708 LSLPREVGKHPETGEPIKAGIGRFGPYVQHEKTYASLEAGDEVFDIGLNRAVTLIA 763 [90][TOP] >UniRef100_Q07L73 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07L73_RHOP5 Length = 944 Score = 90.1 bits (222), Expect = 1e-16 Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CPSC G L K +FGA F+GC +P C+Y ++D E D Sbjct: 628 RQCPSCGTGKLNLKAGKFGA--FVGCSNYPECRYTRPL--AADGGGEGD----------- 672 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + ++ + +K+G +G Y+QLG+ + +G PKRA +P + LE AL L Sbjct: 673 RILGKDPETDRDVAVKAGRFGPYIQLGDAKDYGEGEKPKRAGIPKNMSPGDVELELALKL 732 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +GKHP+ G P+ + + G +++ A + + I L +A+ L++ Sbjct: 733 LSLPREVGKHPETGEPIKAGIGRFGPYVQHEKTYASLEAGDEVFNIGLNRAVTLIA 788 [91][TOP] >UniRef100_A5FWG8 DNA topoisomerase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FWG8_ACICJ Length = 891 Score = 90.1 bits (222), Expect = 1e-16 Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 RVC +C G L ++ RFGA FIGC +P C+Y + +D+ + + Sbjct: 601 RVCQACGTGRLGLRLGRFGA--FIGCSNYPECQYTRRLAVEGGEDEGDQLR------DGM 652 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 KLLG N+ + L+ GPYG+YVQLGE + K P+RA++P ++ITLE A+ L Sbjct: 653 KLLGENA-EGIPVTLRRGPYGLYVQLGEPDPEDKKAKPRRAALPRGMSGETITLEQAIGL 711 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +G HP+ + + + G ++ A + K+ + L +A+ +L+ Sbjct: 712 LSLPRVIGVHPETKQEIQAGIGRFGPYVKMGPIFASLDKDDDVLAVGLNRAVMVLA 767 [92][TOP] >UniRef100_A4YWH0 DNA topoisomerase n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YWH0_BRASO Length = 915 Score = 89.7 bits (221), Expect = 1e-16 Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C G L K +FGA F+GC +P C+Y ++D + D Sbjct: 602 RQCPTCGTGRLNLKAGKFGA--FVGCSNYPECRYTRPL--AADSEAAAD----------- 646 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + S ++ +K+G +G Y+QLGE + +G PKRA +P + L+ AL L Sbjct: 647 RMLGQDPDSGLEVAVKAGRFGPYIQLGEQKDYAEGEKPKRAGIPKGTQPSDVDLDLALKL 706 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +GKHP+ G P+ + + G +++ A + + +I L +A+ L++ Sbjct: 707 LSLPREIGKHPETGLPITAGLGRFGPFVKHDKTYASLEAGDEVFDIGLNRAVTLIA 762 [93][TOP] >UniRef100_C4WLG0 DNA topoisomerase n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WLG0_9RHIZ Length = 885 Score = 89.7 bits (221), Expect = 1e-16 Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ ++GA F+GC +P CKY + Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGKYGA--FVGCSNYPECKYTRQL------ 638 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 D + +EPK LG + + E+I ++G +G YVQ GE ++ KRAS+P Sbjct: 639 --GGDANGEAAAADEPKSLGKDPFTGEEITARTGRFGPYVQRGEGKEA---KRASLPKGW 693 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 VD++ E A+ LL P +G+HP+ G + + + G + + A + + + Sbjct: 694 TVDALDHEKAVALLSLPRDIGQHPETGKMISAGIGRYGPYVSHDGTFANLENAEEVFSVG 753 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 754 LNRAVSVLA 762 [94][TOP] >UniRef100_B4WD40 DNA topoisomerase n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WD40_9CAUL Length = 875 Score = 89.7 bits (221), Expect = 1e-16 Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 2/185 (1%) Frame = +2 Query: 14 YLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187 ++F + D S R CP C +G L K SRFGA FIGC+++P CKY S +D Sbjct: 589 HIFPAKEDGSDPRECPLCHQGQLSLKTSRFGA--FIGCERYPDCKYTRPVASPSAEDGSA 646 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367 ++ + LG + + + + LK G +G YV++ +G PKR+S+P S Sbjct: 647 ESGDRE--------LGMDPETGQPVQLKIGRFGPYVEITPP-EGDKPKRSSLPKGWSPAS 697 Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547 +TL+ AL LL P +G HP+DG + + + G + + A V + E+ L +A Sbjct: 698 LTLDQALRLLALPREVGVHPEDGKMITAGLGRYGPFVLHAGTYANVSDIDEVFEVGLNRA 757 Query: 548 LELLS 562 + LL+ Sbjct: 758 VALLA 762 [95][TOP] >UniRef100_C1MSJ2 DNA topoisomerase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MSJ2_9CHLO Length = 1243 Score = 89.7 bits (221), Expect = 1e-16 Identities = 55/164 (33%), Positives = 92/164 (56%), Gaps = 5/164 (3%) Frame = +2 Query: 41 SRVCPSCTEGTLIFKVSRFGAGYFIGCDQH---PRCKYIAKTLYSSDDDDEEDTPQQNTT 211 SR CP+C +G L K+S+ G FIGC + +C Y A+ + +++ DD E + + Sbjct: 808 SRRCPACVDGRLGLKLSKNGG--FIGCSNYNTDTKCAY-ARPISTTNGDDAESM-RTDPW 863 Query: 212 IEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV--DSITLEDA 385 + + ++ G + ++ + ++ GPYG YVQL TP+ + +V +V D +TL A Sbjct: 864 LSDGEI-GVDPETSRTVSVRRGPYGPYVQLDPTANEGTPRTFGLQNVPEVTADKLTLNVA 922 Query: 386 LVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNT 517 L LL+YP+TLG HP +G V +K+ G+ + + D A +P T Sbjct: 923 LALLKYPMTLGVHPTEGGDVTMKIGPYGWYVNHGDVNAHIPAKT 966 [96][TOP] >UniRef100_B8GZL1 DNA topoisomerase n=2 Tax=Caulobacter vibrioides RepID=B8GZL1_CAUCN Length = 899 Score = 89.4 bits (220), Expect = 2e-16 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 6/183 (3%) Frame = +2 Query: 32 PDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTP 196 PDK R+CP+C G L K +FGA FIGC +P C+Y + S D D E Sbjct: 588 PDKGDGSNPRLCPTCGSGQLSLKTGKFGA--FIGCSNYPECRYTRQLGVSEGDGDAESAD 645 Query: 197 QQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQ-LGEDRKGYTPKRASVPHVKDVDSIT 373 +Q LG N + + LK+G +G YV+ L + PKR+S+P ++ Sbjct: 646 KQ---------LGLNPATGLAVWLKNGRFGPYVEELAAEGSSDKPKRSSLPKGWIASAMD 696 Query: 374 LEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALE 553 +E AL LL P +GKHP DG + + + G + + A + + ++ L +A+ Sbjct: 697 MEKALRLLSLPREVGKHPDDGKVITAGLGRFGPFVLHDGTYANLENADEVFDVGLNRAVA 756 Query: 554 LLS 562 +L+ Sbjct: 757 ILA 759 [97][TOP] >UniRef100_A5EKR5 DNA topoisomerase n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EKR5_BRASB Length = 916 Score = 89.0 bits (219), Expect = 2e-16 Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C G L K +FGA F+GC +P C+Y ++D + D Sbjct: 602 RQCPTCGTGRLNLKAGKFGA--FVGCSNYPECRYTRPL--AADSEAAAD----------- 646 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + S + +K+G +G Y+QLGE + +G PKRA +P + L+ AL L Sbjct: 647 RILGQDPDSGLDVAVKAGRFGPYIQLGEQKDYAEGEKPKRAGIPKGTQPSDVDLDLALKL 706 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +GKHP+ G P+ + + G +++ A + + +I L +A+ L++ Sbjct: 707 LSLPREIGKHPETGLPITAGLGRFGPFVKHDKTYASLEAGDEVFDIGLNRAVTLIA 762 [98][TOP] >UniRef100_Q2IXD6 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2IXD6_RHOP2 Length = 911 Score = 88.6 bits (218), Expect = 3e-16 Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CPSC G L K +FGA F+GC +P C++ D + Sbjct: 603 RQCPSCGTGRLNLKAGKFGA--FVGCSNYPECRHTRPLAADGGGADAD------------ 648 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + + ++ +KSG +G Y+QLG+ + +G PKRA +P + L+ AL L Sbjct: 649 RVLGLDPDTGFEVAVKSGRFGPYIQLGDAKDYAEGEKPKRAGIPKGTSPSDVELDVALRL 708 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +GKHP+ G P+ + + G +++ A + + I L +A+ L++ Sbjct: 709 LALPREVGKHPETGEPIKAGIGRFGPYVQHEKTYASLEAGDDVHNIGLNRAVTLIA 764 [99][TOP] >UniRef100_A6X573 DNA topoisomerase n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X573_OCHA4 Length = 885 Score = 88.6 bits (218), Expect = 3e-16 Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C G L K+ ++GA F+GC +P CKY + Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGMLSLKLGKYGA--FVGCSNYPECKYTRQL------ 638 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 D ++ +EPK LG + + E+I ++G +G YVQ GE ++ KRAS+P Sbjct: 639 --GGDANGESAAADEPKSLGKDPFTGEEITARTGRFGPYVQRGEGKEA---KRASLPKGW 693 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 VD++ E A+ LL P +G+HP+ G + + + G + + A + + + Sbjct: 694 TVDTLDHEKAVALLSLPRDIGQHPETGKMISAGIGRYGPYVSHDGTFANLENAEEVFSVG 753 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 754 LNRAVSVLA 762 [100][TOP] >UniRef100_A5VD05 DNA topoisomerase n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VD05_SPHWW Length = 852 Score = 88.6 bits (218), Expect = 3e-16 Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 7/192 (3%) Frame = +2 Query: 8 ADYLFGSLPDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSD 172 A YLF PDK R+CP C EG L + RFGA FI C +P CK+ + + Sbjct: 582 APYLF---PDKGDGTDPRLCPVCQEGRLSLRGGRFGA--FIACSNYPECKFTRRFAQAGA 636 Query: 173 DDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHV 352 +D DT P ++G + + ++ ++G +G Y+QLG+ G KR+S+P Sbjct: 637 ANDGADTG--------PVVIGTDPATGLEVSKRAGRFGPYIQLGD---GKDAKRSSIP-- 683 Query: 353 KDV--DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPN 526 KDV D + L AL LL P +G HP+ GHP+ + + G + + K A + + Sbjct: 684 KDVLGDDLDLGWALKLLSLPRLIGPHPETGHPITASIGRFGPYLAHDGKYARLGSTAEVF 743 Query: 527 EITLEKALELLS 562 E + A+ L+ Sbjct: 744 ETGMNAAVVKLA 755 [101][TOP] >UniRef100_Q1QKM0 DNA topoisomerase n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QKM0_NITHX Length = 936 Score = 88.2 bits (217), Expect = 4e-16 Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C G L K +FGA F+GC +P C+Y ++D + D Sbjct: 627 RQCPTCGTGKLNLKAGKFGA--FVGCSNYPECRYTRPL--AADGEAGGD----------- 671 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + S + +KSG +G Y+QLGE +G PKRA +P + L+ A+ L Sbjct: 672 RILGKDPESGLDVTVKSGRFGPYIQLGEPSDYGEGEKPKRAGIPKNTSPADMELDLAVKL 731 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +GKHP+ G P+ + + G +R+ A + + +I L +A+ L++ Sbjct: 732 LSLPREIGKHPETGEPITAGIGRFGPFVRHEKTYASLEAGDEVFDIGLNRAVTLIA 787 [102][TOP] >UniRef100_B6JFU9 DNA topoisomerase n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JFU9_OLICO Length = 913 Score = 88.2 bits (217), Expect = 4e-16 Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CPSC G L K +FGA F+GC +P C+Y SS D Sbjct: 603 RQCPSCGTGRLNLKAGKFGA--FVGCSNYPECRYTRPLAASSGTSD-------------- 646 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + +N + +K+G +G Y+QLGE +G PKRA +P + L+ A+ L Sbjct: 647 RVLGKDPKTNLDVAVKAGRFGPYIQLGEPNDYAEGEKPKRAGIPKNMSPADVELDLAIKL 706 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +G HP+DG + + + G +R+ A + I L +A+ L++ Sbjct: 707 LSLPRDVGPHPEDGEIITAGIGRFGPFVRHGKTYASLEAGDDVYTIGLNRAVTLIA 762 [103][TOP] >UniRef100_B6RA74 DNA topoisomerase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RA74_9RHOB Length = 931 Score = 87.8 bits (216), Expect = 5e-16 Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 19/196 (9%) Frame = +2 Query: 32 PDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQH--------------PRCKYIAK 154 PDK R CP C G L KVSRFGA F+GC + P C Y + Sbjct: 593 PDKEDGSDPRKCPKCDTGRLSLKVSRFGA--FVGCSNYNKDKKDGKEPNENPPHCDYTRQ 650 Query: 155 TLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKR 334 D D + P++LG + + ++ L++G +G YVQLGE+ K PKR Sbjct: 651 LTSGGDSD-------AGAAADGPQVLGIDPETGLEVSLRTGRFGPYVQLGEEAK---PKR 700 Query: 335 ASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKN 514 +S+P V + LE AL LL P +G HP+DG + + + G + + A + Sbjct: 701 SSLPRGWSVADLDLEKALQLLSLPREVGTHPEDGKTISAGLGRFGPFVLHDGTYANLDSP 760 Query: 515 TKPNEITLEKALELLS 562 + + + +A+ LL+ Sbjct: 761 DEVFSVGINRAVTLLA 776 [104][TOP] >UniRef100_Q8FW60 DNA topoisomerase n=2 Tax=Brucella suis RepID=Q8FW60_BRUSU Length = 877 Score = 87.4 bits (215), Expect = 7e-16 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++ Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 694 TLDTVDHEKAIALLSLPRNIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 754 LNRAVSVLA 762 [105][TOP] >UniRef100_Q5GTP5 DNA topoisomerase n=1 Tax=Wolbachia endosymbiont strain TRS of Brugia malayi RepID=Q5GTP5_WOLTR Length = 816 Score = 87.4 bits (215), Expect = 7e-16 Identities = 51/177 (28%), Positives = 94/177 (53%), Gaps = 1/177 (0%) Frame = +2 Query: 41 SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEE 220 ++ CP C +G I K++ AG F+GC +P C + + S+D+ E Sbjct: 597 NKKCPDCPDG--ILKLNFGKAGVFLGCSNYPTCTHTKEITGSNDNS------------EY 642 Query: 221 PKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 PK LG + + +++++K GP+G+Y++ + + K S+P +V+ I L A LL Sbjct: 643 PKSLGIDGVTEQEVVIKKGPFGLYLEFNSESE--KKKTVSIPKDINVNDIDLSTATRLLS 700 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKP-NEITLEKALELLSGN 568 P +G+HP+ G V + + + GY I Y K + K+ K EI L++A+++++ + Sbjct: 701 LPKVIGEHPETGKEVKIGLGRFGYYIFYDSKYFSLKKSFKEVLEIQLDEAVQIIANS 757 [106][TOP] >UniRef100_B3CTT6 DNA topoisomerase n=1 Tax=Orientia tsutsugamushi str. Ikeda RepID=B3CTT6_ORITI Length = 788 Score = 87.4 bits (215), Expect = 7e-16 Identities = 51/193 (26%), Positives = 98/193 (50%), Gaps = 5/193 (2%) Frame = +2 Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181 +++LF + D++ ++C C G L K+S++GA F+ CD +P C + + +++D Sbjct: 582 SNFLFPAQNDETDHKLCTLCKVGKLSLKLSKYGA--FLACDNYPSCNFTRNIAAAFENND 639 Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGED--RKGYTPKRASVPHV- 352 + N K +G++ + I LK GP+G Y+Q GED K PKR + + Sbjct: 640 NLPKGKNN------KAIGYSDDMQKTIYLKEGPFGWYIQAGEDSTNKNDKPKRVPISVIS 693 Query: 353 KDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEI 532 ITLE A+ LL P +G +P + + V + G +++ K +PKN + Sbjct: 694 SSPQDITLETAVKLLALPKVIGLNPNTNKEITVAVGRYGPYLKHDGKFISIPKNYDYLNL 753 Query: 533 TLEKALELLSGNN 571 ++ +++++ ++ Sbjct: 754 SINDCIKIITSSS 766 [107][TOP] >UniRef100_A9MBP4 DNA topoisomerase n=2 Tax=Brucella RepID=A9MBP4_BRUC2 Length = 877 Score = 87.4 bits (215), Expect = 7e-16 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++ Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 694 TLDTVDHEKAIALLSLPRNIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 754 LNRAVSVLA 762 [108][TOP] >UniRef100_B6BVC6 DNA topoisomerase n=1 Tax=beta proteobacterium KB13 RepID=B6BVC6_9PROT Length = 823 Score = 87.4 bits (215), Expect = 7e-16 Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 3/179 (1%) Frame = +2 Query: 35 DKSRVCPSCTEGTLIFKVSRFGA-GYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTT 211 D + CP C G +F SR G G FIGC +P C Y +EED Sbjct: 586 DINESCPKC--GQALF--SRLGRRGKFIGCSGYPDCDYTRNV-------NEEDGAN---- 630 Query: 212 IEEPKLLGFNSGSNEKILLKSGPYGIYVQLG--EDRKGYTPKRASVPHVKDVDSITLEDA 385 EP+++ + +++ +LL GPYG Y+Q+G E+ PKR S+P + S+ + A Sbjct: 631 --EPQVIFHDQETDKDVLLLRGPYGPYLQIGVPEEDSKTKPKRVSIPPNIPISSVNEQVA 688 Query: 386 LVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L+ PL LG +P+ G P++ + + G + + K +PK +IT ++A+EL++ Sbjct: 689 KQLMSLPLALGDYPETGKPIVANIGRFGPYVSHDGKFKSIPKADNIFDITFDRAVELVA 747 [109][TOP] >UniRef100_A3WWV5 DNA topoisomerase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWV5_9BRAD Length = 910 Score = 87.4 bits (215), Expect = 7e-16 Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C G L K +FGA F+GC +P C+Y ++D D D Sbjct: 602 RQCPTCGTGRLNLKAGKFGA--FVGCSNYPDCRYTRPL--AADGDAGGD----------- 646 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + S + +KSG +G Y+QLGE +G PKRA +P + L+ A+ L Sbjct: 647 RVLGKDPESGLDVAVKSGRFGPYIQLGEATDYAEGEKPKRAGIPKNTSPADMELDLAVKL 706 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +GKHP+ G P+ + + G +R+ A + + +I L +A+ L++ Sbjct: 707 LSLPREIGKHPETGAPITAGIGRFGPFVRHEKTYASLEAGDEVFDIGLNRAVTLIA 762 [110][TOP] >UniRef100_C9V5N7 DNA topoisomerase I n=2 Tax=Brucella neotomae 5K33 RepID=C9V5N7_BRUNE Length = 877 Score = 87.0 bits (214), Expect = 9e-16 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++ Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 754 LNRAVSVLA 762 [111][TOP] >UniRef100_D0B740 DNA topoisomerase I n=4 Tax=Brucella RepID=D0B740_BRUME Length = 877 Score = 87.0 bits (214), Expect = 9e-16 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++ Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 754 LNRAVSVLA 762 [112][TOP] >UniRef100_C9U9S4 DNA topoisomerase I n=4 Tax=Brucella abortus RepID=C9U9S4_BRUAB Length = 877 Score = 87.0 bits (214), Expect = 9e-16 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++ Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 645 E--------TAASDEPKPLGKDPFTGEQITARTGRFGPYIQRGEGKEA---KRASLPKGW 693 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 754 LNRAVSVLA 762 [113][TOP] >UniRef100_UPI0001B4856F DNA topoisomerase I n=1 Tax=Brucella pinnipedialis M163/99/10 RepID=UPI0001B4856F Length = 828 Score = 87.0 bits (214), Expect = 9e-16 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++ Sbjct: 596 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 653 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 654 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 702 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 703 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 762 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 763 LNRAVSVLA 771 [114][TOP] >UniRef100_UPI0001B48528 DNA topoisomerase I n=2 Tax=Brucella suis bv. 5 str. 513 RepID=UPI0001B48528 Length = 886 Score = 87.0 bits (214), Expect = 9e-16 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++ Sbjct: 596 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 653 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 654 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 702 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 703 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 762 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 763 LNRAVSVLA 771 [115][TOP] >UniRef100_C9T181 DNA topoisomerase I n=2 Tax=Brucella ceti M644/93/1 RepID=C9T181_9RHIZ Length = 877 Score = 87.0 bits (214), Expect = 9e-16 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++ Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 754 LNRAVSVLA 762 [116][TOP] >UniRef100_C7LI90 DNA topoisomerase I n=4 Tax=Brucella RepID=C7LI90_BRUMC Length = 877 Score = 87.0 bits (214), Expect = 9e-16 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++ Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 754 LNRAVSVLA 762 [117][TOP] >UniRef100_Q8YC66 DNA topoisomerase n=1 Tax=Brucella melitensis RepID=Q8YC66_BRUME Length = 901 Score = 87.0 bits (214), Expect = 9e-16 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++ Sbjct: 611 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 668 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 669 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 717 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 718 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 777 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 778 LNRAVSVLA 786 [118][TOP] >UniRef100_A9WYS3 DNA topoisomerase n=1 Tax=Brucella suis ATCC 23445 RepID=A9WYS3_BRUSI Length = 877 Score = 87.0 bits (214), Expect = 9e-16 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++ Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 754 LNRAVSVLA 762 [119][TOP] >UniRef100_A5VUT6 DNA topoisomerase n=1 Tax=Brucella ovis ATCC 25840 RepID=A5VUT6_BRUO2 Length = 877 Score = 87.0 bits (214), Expect = 9e-16 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++ Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 754 LNRAVSVLA 762 [120][TOP] >UniRef100_A1UT28 DNA topoisomerase n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT28_BARBK Length = 869 Score = 87.0 bits (214), Expect = 9e-16 Identities = 54/173 (31%), Positives = 87/173 (50%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R C C G L K+ R+GA F+GC +P CKY T D EE N +EP Sbjct: 604 RSCSLCKHGQLSLKLGRYGA--FVGCSNYPECKY---TKQLGTDAGEEREAAHN---DEP 655 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 +LG + + + I L++G +G Y+QLGE G KR+ +P +++ L+ AL LL Sbjct: 656 VILGVDPETGKDIFLRNGRFGPYIQLGE---GKEAKRSGLPKGWKTENVNLDKALSLLSL 712 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+ G + + + G + + K A + +I + +A+ +L+ Sbjct: 713 PREVGIHPETGQMITATIGRYGPYLTHDRKYAALSNVDDVFDIGINRAVTVLA 765 [121][TOP] >UniRef100_C9TJZ0 DNA topoisomerase I n=1 Tax=Brucella pinnipedialis M163/99/10 RepID=C9TJZ0_9RHIZ Length = 848 Score = 87.0 bits (214), Expect = 9e-16 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++ Sbjct: 616 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 673 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 674 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 722 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 723 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 782 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 783 LNRAVSVLA 791 [122][TOP] >UniRef100_C9TAH4 DNA topoisomerase I n=1 Tax=Brucella ceti M13/05/1 RepID=C9TAH4_9RHIZ Length = 877 Score = 87.0 bits (214), Expect = 9e-16 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++ Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 754 LNRAVSVLA 762 [123][TOP] >UniRef100_Q3SRW8 DNA topoisomerase n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SRW8_NITWN Length = 911 Score = 86.7 bits (213), Expect = 1e-15 Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C G L K +FGA F+GC +P C++ ++D + D Sbjct: 602 RQCPTCGTGRLNLKAGKFGA--FVGCSNYPECRHTRPL--AADGEAGGD----------- 646 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + S + +KSG +G Y+QLGE +G PKRA +P I L+ A+ L Sbjct: 647 RVLGKDPESGLDVAVKSGRFGPYIQLGEASDYGEGEKPKRAGIPKNTSPADIELDLAVKL 706 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +GKHP+ G P+ + + G +R+ A + + +I L +A+ L++ Sbjct: 707 LSLPREIGKHPETGEPITAGIGRFGPFVRHEKTYASLEAGDEVFDIGLNRAVTLIA 762 [124][TOP] >UniRef100_B2SB52 DNA topoisomerase n=1 Tax=Brucella abortus S19 RepID=B2SB52_BRUA1 Length = 828 Score = 86.7 bits (213), Expect = 1e-15 Identities = 51/173 (29%), Positives = 89/173 (51%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C GTL K+ R+GA F+GC +P CKY + ++ + +EP Sbjct: 554 RSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANGE--------TAASDEP 603 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG + + E+I ++G +G Y+Q GE ++ KRAS+P +D++ E A+ LL Sbjct: 604 KPLGKDPFTGEQITARTGRFGPYIQRGEGKEA---KRASLPKGWTLDTVDHEKAIALLSL 660 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+ G + + + G + + A + + + L +A+ +L+ Sbjct: 661 PRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVGLNRAVSVLA 713 [125][TOP] >UniRef100_Q4EA11 DNA topoisomerase (Fragment) n=1 Tax=Wolbachia endosymbiont of Drosophila ananassae RepID=Q4EA11_9RICK Length = 496 Score = 86.7 bits (213), Expect = 1e-15 Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 1/174 (0%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229 CP+C G I K++ AG F+GC +P C + + S+D+ E PK Sbjct: 319 CPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDNS------------EYPKS 364 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPL 409 LG + +N+++++K GP+G+Y++ + K K S+P +V+ I L A LL P Sbjct: 365 LGVDGITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDINVNEIDLSTATQLLSLPK 422 Query: 410 TLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT-LEKALELLSGN 568 +G+HP+ G V + + + GY I Y K + K++K T L +A+++++ + Sbjct: 423 VIGEHPETGKEVKIGLGRFGYYIFYDGKYFSLKKSSKEVLNTELSEAVQIIANS 476 [126][TOP] >UniRef100_C0R4C4 DNA topoisomerase n=2 Tax=Wolbachia RepID=C0R4C4_WOLWR Length = 816 Score = 86.7 bits (213), Expect = 1e-15 Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 1/174 (0%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229 CP+C G I K++ AG F+GC +P C + + S+D+ E PK Sbjct: 600 CPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDNS------------EYPKS 645 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPL 409 LG + +N+++++K GP+G+Y++ + K K S+P +V+ I L A LL P Sbjct: 646 LGVDGITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDINVNEIDLSTATQLLSLPK 703 Query: 410 TLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT-LEKALELLSGN 568 +G+HP+ G V + + + GY I Y K + K++K T L +A+++++ + Sbjct: 704 VIGEHPETGKEVKIGLGRFGYYIFYDGKYFSLKKSSKEVLNTELSEAVQIIANS 757 [127][TOP] >UniRef100_Q2YKM3 DNA topoisomerase n=4 Tax=Brucella abortus RepID=Q2YKM3_BRUA2 Length = 877 Score = 86.7 bits (213), Expect = 1e-15 Identities = 51/173 (29%), Positives = 89/173 (51%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C GTL K+ R+GA F+GC +P CKY + ++ + +EP Sbjct: 603 RSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANGE--------TAASDEP 652 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG + + E+I ++G +G Y+Q GE ++ KRAS+P +D++ E A+ LL Sbjct: 653 KPLGKDPFTGEQITARTGRFGPYIQRGEGKEA---KRASLPKGWTLDTVDHEKAIALLSL 709 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+ G + + + G + + A + + + L +A+ +L+ Sbjct: 710 PRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVGLNRAVSVLA 762 [128][TOP] >UniRef100_B9JDL6 DNA topoisomerase n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JDL6_AGRRK Length = 889 Score = 86.3 bits (212), Expect = 2e-15 Identities = 47/142 (33%), Positives = 74/142 (52%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+C C G L K+ ++GA F+GC +P C Y + E T + + + EP Sbjct: 608 RICQVCGTGNLSLKLGKYGA--FVGCSNYPECNYTRQL------SSEGGTEAEASGLNEP 659 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG + +NE++ L+SG +G Y+Q G+ G KRAS+P + I E A+ L+ Sbjct: 660 KALGTDPVTNEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWKPEDIDYEKAMALISL 716 Query: 404 PLTLGKHPKDGHPVILKVAKGG 469 P +GKHP+ G + + + G Sbjct: 717 PRDIGKHPESGKMISSGIGRYG 738 [129][TOP] >UniRef100_UPI0000384A7F COG0550: Topoisomerase IA n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384A7F Length = 895 Score = 85.9 bits (211), Expect = 2e-15 Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 19/192 (9%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C G L K+ +FGA FIGC +P C++ + L + + +EE E P Sbjct: 601 RSCPTCNAGRLSLKLGKFGA--FIGCSAYPECRF-TRPLTTGGEGEEE-------VREGP 650 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGED-----------RKGYTPKRASVPHVKDVD-- 364 K LG + S + L+ GPYG YVQLG++ KG K A P K V Sbjct: 651 KELGNDPASGLPVSLRKGPYGHYVQLGDESTMKAEPAPVPEKGKKAKAAKTPKPKRVSLY 710 Query: 365 ------SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPN 526 +TL+ A LL+ P +G HP+ G + V + G + + + K+ Sbjct: 711 KGLEPADVTLDIACRLLELPRLVGTHPETGKSISAGVGRFGPYVVHDGTYKSLAKDDDVL 770 Query: 527 EITLEKALELLS 562 I + +A+ELLS Sbjct: 771 VIGMNRAMELLS 782 [130][TOP] >UniRef100_Q73G34 DNA topoisomerase n=1 Tax=Wolbachia endosymbiont of Drosophila melanogaster RepID=Q73G34_WOLPM Length = 816 Score = 85.9 bits (211), Expect = 2e-15 Identities = 51/174 (29%), Positives = 92/174 (52%), Gaps = 1/174 (0%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229 CP+C G I K++ AG F+GC +P C + + S+D+ E PK Sbjct: 600 CPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDNS------------EYPKS 645 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPL 409 LG + +N+++++K GP+G+Y++ + K K S+P +V+ I L A LL P Sbjct: 646 LGIDDITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDINVNEIDLSTATQLLSLPK 703 Query: 410 TLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT-LEKALELLSGN 568 +G+HP+ G V + + + GY I Y + + K++K T L +A+++++ + Sbjct: 704 VIGEHPETGKEVKIGLGRFGYYIFYDGRYFSLKKSSKEVLNTELSEAVQIIANS 757 [131][TOP] >UniRef100_B5ZYP8 DNA topoisomerase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B5ZYP8_RHILW Length = 884 Score = 85.9 bits (211), Expect = 2e-15 Identities = 49/142 (34%), Positives = 75/142 (52%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+C C G L K+ ++GA F+GC +P C Y + SS++ E D I EP Sbjct: 606 RICQVCGTGNLSLKLGKYGA--FVGCSNYPECNYTRQL--SSENGGEAD----GAAINEP 657 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG + + E++ L+SG +G Y+Q G+ G KRAS+P + I E A+ L+ Sbjct: 658 KNLGTDPTTGEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWKPEDIDYEKAMALISL 714 Query: 404 PLTLGKHPKDGHPVILKVAKGG 469 P +GKHP+ G + + + G Sbjct: 715 PRDIGKHPESGKMISSGIGRYG 736 [132][TOP] >UniRef100_C0F991 DNA topoisomerase I (Fragment) n=1 Tax=Wolbachia endosymbiont of Muscidifurax uniraptor RepID=C0F991_9RICK Length = 376 Score = 85.9 bits (211), Expect = 2e-15 Identities = 51/174 (29%), Positives = 92/174 (52%), Gaps = 1/174 (0%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229 CP+C G I K++ AG F+GC +P C + + S+D+ E PK Sbjct: 160 CPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDNS------------EYPKS 205 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPL 409 LG + +N+++++K GP+G+Y++ + K K S+P +V+ I L A LL P Sbjct: 206 LGIDDITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDINVNEIDLSTATQLLSLPK 263 Query: 410 TLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT-LEKALELLSGN 568 +G+HP+ G V + + + GY I Y + + K++K T L +A+++++ + Sbjct: 264 VIGEHPETGKEVKIGLGRFGYYIFYDGRYFSLKKSSKEVLNTELSEAVQIIANS 317 [133][TOP] >UniRef100_UPI0000DAED1D hypothetical protein Wendoof_01000097 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAED1D Length = 760 Score = 85.5 bits (210), Expect = 3e-15 Identities = 48/157 (30%), Positives = 82/157 (52%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229 CP+C G I K++ AG F+GC +P C + + S+D+ E PK Sbjct: 600 CPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDNS------------EYPKS 645 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPL 409 LG + +N+++++K GP+G+Y++ + K K S+P +V+ I L A LL P Sbjct: 646 LGIDDITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDINVNEIDLSTATQLLSLPK 703 Query: 410 TLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTK 520 +G+HP+ G V + + + GY I Y + + K++K Sbjct: 704 VIGEHPETGKEVKIGLGRFGYYIFYDGRYFSLKKSSK 740 [134][TOP] >UniRef100_UPI0001B481FA DNA topoisomerase I n=1 Tax=Brucella sp. 83/13 RepID=UPI0001B481FA Length = 886 Score = 85.1 bits (209), Expect = 3e-15 Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R CP+C G L K+ R+GA F+GC +P CKY + ++ Sbjct: 596 ELAPLVFPAREDGSDPRSCPTCGTGVLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 653 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P Sbjct: 654 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 702 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +D++ E A+ LL P +G HP+ G + + + G + + A + + + Sbjct: 703 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 762 Query: 536 LEKALELLS 562 L +A+ +L+ Sbjct: 763 LNRAVSVLA 771 [135][TOP] >UniRef100_Q578A3 DNA topoisomerase n=1 Tax=Brucella abortus RepID=Q578A3_BRUAB Length = 877 Score = 85.1 bits (209), Expect = 3e-15 Identities = 50/173 (28%), Positives = 88/173 (50%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C GTL K+ R+GA F+GC +P CKY + ++ + +EP Sbjct: 603 RSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANGE--------TAASDEP 652 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG + + E+I ++G +G Y+Q GE ++ KR S+P +D++ E A+ LL Sbjct: 653 KPLGKDPFTGEQITARTGRFGPYIQRGEGKEA---KRTSLPKGWTLDTVDHEKAIALLSL 709 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+ G + + + G + + A + + + L +A+ +L+ Sbjct: 710 PRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVGLNRAVSVLA 762 [136][TOP] >UniRef100_Q3SMS7 DNA topoisomerase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMS7_THIDA Length = 857 Score = 85.1 bits (209), Expect = 3e-15 Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 3/174 (1%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229 CP C + L + S+ G FIGC +P C Y P T E + Sbjct: 574 CPKCAK-PLFMQASK--RGLFIGCSGYPECDYTR--------------PLHPATAEGDNI 616 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLG---EDRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 LG + S + L SG +G YVQ+G ED+K P+RAS P +++ TL+ AL L Sbjct: 617 LGKDPASGLDVKLLSGRFGPYVQIGDMPEDKKAPKPRRASWPKDIPLENATLDLALKFLS 676 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP G P++ + G + + K +PK EI L +ALE+L+ Sbjct: 677 LPREVGHHPTTGLPIVANNGRFGPYLLHDGKFKSIPKTDSVYEIDLPRALEVLA 730 [137][TOP] >UniRef100_Q1NAF4 DNA topoisomerase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NAF4_9SPHN Length = 855 Score = 85.1 bits (209), Expect = 3e-15 Identities = 51/173 (29%), Positives = 84/173 (48%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP C +G L + RFGA FI C +P CKY K D E+ P+ Sbjct: 585 RACPMCGDGQLALRGGRFGA--FIACSNYPDCKYTRKFGQPGGKDGEDTGPE-------- 634 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 +LG + + + I KSG +G Y+++GE ++ KR S+P +TL+ A+ LL Sbjct: 635 -VLGQHPETGQDITRKSGRFGPYIEMGEGKEA---KRGSIPKDLPDGELTLDWAVKLLSL 690 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+ G P++ + + G + + K + + E+ + A+ L+ Sbjct: 691 PREVGLHPETGKPIVANIGRFGPYLLHDGKYGRLSNTAEIFEVGMNSAVVKLA 743 [138][TOP] >UniRef100_C6XHN6 DNA topoisomerase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHN6_LIBAP Length = 837 Score = 84.7 bits (208), Expect = 5e-15 Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 1/177 (0%) Frame = +2 Query: 35 DKSRVCPSCTEGTLIFKVS-RFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTT 211 + SR CP C +L K+S ++GA F+GC +P CKY + PQ Sbjct: 600 EDSRTCPECHTHSLSLKLSSKYGA--FVGCTNYPECKYTRQLT---------SNPQDIPE 648 Query: 212 IEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALV 391 ++E LLG + + E + L+SG +G+YVQ G+ G KR S+P DS+ + A+ Sbjct: 649 MKESVLLGNDLETKESVTLRSGRFGLYVQRGD---GKDAKRCSLPKTWKSDSVDYDKAMS 705 Query: 392 LLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 LL P +G HP+ +I K GY + + + + I LE+A+ ++ Sbjct: 706 LLSLPREIGIHPETQKNIIAGTGKYGYYLNHDGAYTKLESIEQVLTIDLEQAISCIT 762 [139][TOP] >UniRef100_C1ZPX2 DNA topoisomerase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=C1ZPX2_RHOMR Length = 858 Score = 84.7 bits (208), Expect = 5e-15 Identities = 44/115 (38%), Positives = 68/115 (59%) Frame = +2 Query: 218 EPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLL 397 E ++LG + + +LL+ GPYG YVQLG+D + PKR ++P + + LE A LL Sbjct: 666 EDRVLGIDPETGMPVLLRRGPYGYYVQLGDDEQAGKPKRVALPPGMEPAVVDLETARALL 725 Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 Q P TLG HP+ G PV++ + + G +++ A + + I LE+ALELL+ Sbjct: 726 QLPRTLGTHPETGQPVLVGIGRYGPYVQHGRTFASLKEEDDVFTIDLERALELLA 780 Score = 55.5 bits (132), Expect = 3e-06 Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 7/131 (5%) Frame = +2 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367 D ++ P+ LG + + + +L+ G YG YVQ G AS+ DV + Sbjct: 717 DLETARALLQLPRTLGTHPETGQPVLVGIGRYGPYVQHGRTF-------ASLKEEDDVFT 769 Query: 368 ITLEDALVLL------QYPL-TLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPN 526 I LE AL LL PL LG HP+ G PV + + G +++ A +P+ P Sbjct: 770 IDLERALELLAEKEARSRPLRVLGTHPETGEPVEVWEGRYGPYVKHGRTNASLPEGRAPE 829 Query: 527 EITLEKALELL 559 ITLE+AL LL Sbjct: 830 AITLEEALALL 840 [140][TOP] >UniRef100_Q1MII0 DNA topoisomerase n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1MII0_RHIL3 Length = 884 Score = 84.3 bits (207), Expect = 6e-15 Identities = 47/142 (33%), Positives = 76/142 (53%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+C C G L K+ ++GA F+GC +P C Y + SS++ E D + EP Sbjct: 606 RICQVCGTGNLSLKLGKYGA--FVGCSNYPDCNYTRQL--SSENGGEAD----GAALNEP 657 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG + + E++ L+SG +G Y+Q G+ ++ KRAS+P + I E A+ L+ Sbjct: 658 KNLGTDPTTGEELTLRSGRFGPYIQRGDGKEA---KRASLPKGWKPEDIDYEKAMALISL 714 Query: 404 PLTLGKHPKDGHPVILKVAKGG 469 P +GKHP+ G + + + G Sbjct: 715 PRDIGKHPESGKMISSGIGRYG 736 [141][TOP] >UniRef100_B0T0I9 DNA topoisomerase n=1 Tax=Caulobacter sp. K31 RepID=B0T0I9_CAUSK Length = 896 Score = 84.3 bits (207), Expect = 6e-15 Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 6/183 (3%) Frame = +2 Query: 32 PDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTP 196 PDK R+CP+C G L KV +FGA FIGC +P C++ + L +++ + E + Sbjct: 588 PDKGDGSDPRLCPTCGTGQLSLKVGKFGA--FIGCSNYPECRF-TRQLATAEGEGEAEAA 644 Query: 197 QQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQL-GEDRKGYTPKRASVPHVKDVDSIT 373 K LG N + + LK+G +G YV+ + G PKR+S+P + Sbjct: 645 D--------KELGINPATGRAVWLKNGRFGPYVEEPAAEGSGDKPKRSSLPKGWTPAGLD 696 Query: 374 LEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALE 553 LE AL LL P +G HP DG + + + G + + A + + +I L +A+ Sbjct: 697 LEKALRLLALPREVGMHPDDGKKITAGLGRFGPFVLHEGTYANLENPEEVFDIGLNRAVA 756 Query: 554 LLS 562 LL+ Sbjct: 757 LLA 759 [142][TOP] >UniRef100_C6P2V7 DNA topoisomerase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2V7_9GAMM Length = 876 Score = 84.3 bits (207), Expect = 6e-15 Identities = 62/174 (35%), Positives = 85/174 (48%), Gaps = 3/174 (1%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGA-GYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPK 226 CP C G + K R G G FIGC +P C Y EED E K Sbjct: 587 CPKC--GKPLSK--RLGKRGSFIGCTGYPECDYTRSL------GGEEDAG------ESRK 630 Query: 227 LLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT--PKRASVPHVKDVDSITLEDALVLLQ 400 LG + +N+ +LL GPYG YVQLGE +G PKR S P ++ L AL LL Sbjct: 631 ELGQHPDTNQLVLLLRGPYGPYVQLGEMIEGEKTKPKRVSWPKELPLEQADLPSALKLLS 690 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+ G VI+ + + G I + K +P+ +I L++++ELL+ Sbjct: 691 LPREVGAHPETGKKVIVNIGRFGPYIGHDGKFKSIPRTDSIFDIGLDRSVELLA 744 [143][TOP] >UniRef100_B3CNR3 DNA topoisomerase n=2 Tax=Wolbachia endosymbiont of Culex quinquefasciatus RepID=B3CNR3_WOLPP Length = 816 Score = 84.3 bits (207), Expect = 6e-15 Identities = 49/174 (28%), Positives = 92/174 (52%), Gaps = 1/174 (0%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229 CP+C+ G I K++ AG F+GC +P C + + S+D+ E PK Sbjct: 600 CPNCSGG--ILKLNFGKAGVFLGCSNYPACNHTKEITGSNDNS------------EYPKS 645 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPL 409 LG + + +++++K GP+G+Y++ + + K+ SVP +V+ I L A LL P Sbjct: 646 LGIDDVTGQEVMIKKGPFGLYLEFNSESE--KKKKISVPKDINVNDIDLNTATRLLSLPK 703 Query: 410 TLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKP-NEITLEKALELLSGN 568 +G+HP+ G V + + + GY I Y + + K++K + L +A++++ + Sbjct: 704 IIGEHPETGKEVKIGLGRFGYYILYDGRYFSLKKSSKEVLDTQLNEAIQIIESS 757 [144][TOP] >UniRef100_B5K6L9 DNA topoisomerase n=1 Tax=Octadecabacter antarcticus 238 RepID=B5K6L9_9RHOB Length = 889 Score = 84.3 bits (207), Expect = 6e-15 Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 1/150 (0%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C G L + +R G G FIGC +P CKY + DD P E Sbjct: 595 RLCPNCNVGRLSMRTARSG-GAFIGCSNYPECKY-TRAFGPPGQDDASGIPP------EG 646 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 K LG + G +KI + G +G Y Q GE + P R SVP + +TLE A+ LL Sbjct: 647 KELGMDDG--DKIWIHKGRFGPYAQRGEVTEENKKPNRQSVPKEWPPEDVTLETAVKLLS 704 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490 P +G HP+DG V + + G I++ + Sbjct: 705 LPRLIGTHPEDGVNVFANIGRYGPYIKHAE 734 [145][TOP] >UniRef100_B9NA31 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NA31_POPTR Length = 86 Score = 84.3 bits (207), Expect = 6e-15 Identities = 43/73 (58%), Positives = 55/73 (75%), Gaps = 2/73 (2%) Frame = +2 Query: 140 KYIAKTLYSSDDDDEEDTPQQ--NTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR 313 +YIAKTLY DD+EE+TPQ +T ++E KLL + S+EK++LK GPYG YVQLGEDR Sbjct: 10 RYIAKTLYG--DDEEEETPQDTNDTNVDETKLLDVHPTSDEKVVLKKGPYGFYVQLGEDR 67 Query: 314 KGYTPKRASVPHV 352 G T KR+SV H+ Sbjct: 68 TGCTLKRSSVSHL 80 [146][TOP] >UniRef100_Q2K9P9 DNA topoisomerase n=1 Tax=Rhizobium etli CFN 42 RepID=Q2K9P9_RHIEC Length = 884 Score = 84.0 bits (206), Expect = 8e-15 Identities = 51/173 (29%), Positives = 87/173 (50%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+C C G L K+ R+GA F+GC +P C Y + SS++ E + + EP Sbjct: 606 RICQVCGTGNLSLKLGRYGA--FVGCSNYPECNYTRQL--SSENGGEAE----GVALNEP 657 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG + + E++ L+SG +G Y+Q G+ G KRAS+P + I E A+ L+ Sbjct: 658 KSLGTDPTTGEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWKPEDIDYEKAMALISL 714 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G+HP+ G + + + G + + A + + L +A+ L++ Sbjct: 715 PRDIGRHPETGKMISSGIGRYGPFLLHDGSYANLETVEDVFSVGLNRAVTLIA 767 [147][TOP] >UniRef100_C8SRW7 DNA topoisomerase type IA zn finger domain protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SRW7_9RHIZ Length = 291 Score = 84.0 bits (206), Expect = 8e-15 Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R+CP C G L K+ +FGA F+GC +P C + + +++ Sbjct: 8 ELAPLVFPAREDGSNPRICPKCGTGNLSLKLGKFGA--FVGCSNYPECSFTRQLGDAANP 65 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + E + T K+LG + + E+I L+SG +G Y+Q G+ ++ KR+S+P Sbjct: 66 NGENGGGEDGT-----KVLGKDPYTAEEITLRSGRFGPYIQRGDGKEA---KRSSLPKGW 117 Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535 +SI E AL LL P +GKHP+ G + + + G + + A V I Sbjct: 118 TPESIDHEKALALLSLPRDVGKHPESGKMISAGLGRYGPFVLHDGTYANVDSIEDVFSIG 177 Query: 536 LEKALELLS 562 L +A+ +++ Sbjct: 178 LNRAVTVIA 186 [148][TOP] >UniRef100_UPI00019049A4 DNA topoisomerase I n=1 Tax=Rhizobium etli 8C-3 RepID=UPI00019049A4 Length = 378 Score = 83.2 bits (204), Expect = 1e-14 Identities = 47/142 (33%), Positives = 75/142 (52%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+C C G L K+ ++GA F+GC +P C Y + SS++ E + + EP Sbjct: 243 RICQVCGTGNLSLKLGKYGA--FVGCSNYPECNYTRQL--SSENGGEAE----GVALNEP 294 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG + + E++ L+SG +G Y+Q G+ G KRAS+P + I E A+ L+ Sbjct: 295 KNLGTDPTTGEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWKPEDIDYEKAMALISL 351 Query: 404 PLTLGKHPKDGHPVILKVAKGG 469 P +GKHP+ G + + + G Sbjct: 352 PRDIGKHPETGKMISSGIGRYG 373 [149][TOP] >UniRef100_C6AUV4 DNA topoisomerase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6AUV4_RHILS Length = 884 Score = 83.2 bits (204), Expect = 1e-14 Identities = 46/142 (32%), Positives = 76/142 (53%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+C C G L K+ ++GA F+GC +P C Y + SS++ + D + EP Sbjct: 606 RICQVCGTGNLSLKLGKYGA--FVGCSNYPDCNYTRQL--SSENGGDAD----GAALNEP 657 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG + + E++ L+SG +G Y+Q G+ ++ KRAS+P + I E A+ L+ Sbjct: 658 KNLGTDPTTGEELTLRSGRFGPYIQRGDGKEA---KRASLPKGWKPEDIDYEKAMALISL 714 Query: 404 PLTLGKHPKDGHPVILKVAKGG 469 P +GKHP+ G + + + G Sbjct: 715 PRDIGKHPESGKMISSGIGRYG 736 [150][TOP] >UniRef100_B3PW33 DNA topoisomerase n=1 Tax=Rhizobium etli CIAT 652 RepID=B3PW33_RHIE6 Length = 884 Score = 83.2 bits (204), Expect = 1e-14 Identities = 47/142 (33%), Positives = 75/142 (52%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+C C G L K+ ++GA F+GC +P C Y + SS++ E + + EP Sbjct: 606 RICQVCGTGNLSLKLGKYGA--FVGCSNYPECNYTRQL--SSENGGEAE----GVALNEP 657 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG + + E++ L+SG +G Y+Q G+ G KRAS+P + I E A+ L+ Sbjct: 658 KNLGTDPTTGEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWKPEDIDYEKAMALISL 714 Query: 404 PLTLGKHPKDGHPVILKVAKGG 469 P +GKHP+ G + + + G Sbjct: 715 PRDIGKHPETGKMISSGIGRYG 736 [151][TOP] >UniRef100_B9TJX8 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TJX8_RICCO Length = 290 Score = 83.2 bits (204), Expect = 1e-14 Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 5/180 (2%) Frame = +2 Query: 47 VCPSCTEGTLIFKVSRFGAGYFIGCDQH---PRCKYIAKTLYSSDDDDEEDTPQQNTTIE 217 +CP C L ++SR+G+ FIGC + P+C Y + + + Sbjct: 1 MCPKCGR-QLQKQLSRYGS--FIGCTGYNATPKCDY------------KRNLDGEANAAS 45 Query: 218 EPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG--YTPKRASVPHVKDVDSITLEDALV 391 EP ++G + + + I L +GPYG Y+Q+G+ +G PKR S+P + I ++ A + Sbjct: 46 EPVVIGQDVDTQKDIYLMNGPYGPYLQVGQPVEGDKKKPKRVSIPKEIPLSQINIDTAHM 105 Query: 392 LLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLSGNN 571 LL P LG+HP+ G ++ + + G + + K +PK I LE A++LL+ N Sbjct: 106 LLSLPRDLGQHPETGKKIVANIGRFGPYVNHDGKFKSIPKTESVFSIDLEGAVKLLAAAN 165 [152][TOP] >UniRef100_A8II62 DNA topoisomerase (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8II62_CHLRE Length = 772 Score = 83.2 bits (204), Expect = 1e-14 Identities = 56/154 (36%), Positives = 75/154 (48%), Gaps = 5/154 (3%) Frame = +2 Query: 23 GSLPDKS-RVCPSCTEGTLIFKVSRFGAGYFIGC----DQHPRCKYIAKTLYSSDDDDEE 187 G P + R CP C G L+ K SR+G FIGC D+ +C + L S D Sbjct: 616 GPAPQRDPRRCPKCGVGRLVLKPSRYGG--FIGCSNFADEALQCDFARPLLPSEGADGGS 673 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367 P T +LLG + + + + ++ GPYG+YVQ G+ K PK+ + S Sbjct: 674 CVPFNATE----RLLGSHPDTGQPVYVRLGPYGLYVQAGDAPKK-EPKKKKTGFT--IQS 726 Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGG 469 +TLE AL LL P TLG HP DG PV+ G Sbjct: 727 VTLEAALALLALPRTLGLHPGDGQPVVANTGPFG 760 [153][TOP] >UniRef100_Q92QL9 DNA topoisomerase n=1 Tax=Sinorhizobium meliloti RepID=Q92QL9_RHIME Length = 900 Score = 82.8 bits (203), Expect = 2e-14 Identities = 53/173 (30%), Positives = 87/173 (50%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+C C G L K+ ++GA F+GC +P C Y + SSD + + + N EP Sbjct: 612 RICQVCGTGKLSLKLGKYGA--FVGCSNYPECNYTRQL--SSDSNGDAEAAAAN----EP 663 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 + LG + + E+I L++G +G YVQ G+ ++ KRAS+P +I E AL LL Sbjct: 664 QSLGKDPHTGEEITLRNGRFGPYVQRGDGKEA---KRASLPKGWTPAAIDHEKALALLSL 720 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+ G + + + G + + A + I L +A+ +L+ Sbjct: 721 PRDIGPHPESGKMISTGIGRYGPFVLHNGTYANLESVEDVFSIGLNRAISVLA 773 [154][TOP] >UniRef100_C3MA93 DNA topoisomerase n=1 Tax=Rhizobium sp. NGR234 RepID=C3MA93_RHISN Length = 890 Score = 82.8 bits (203), Expect = 2e-14 Identities = 56/173 (32%), Positives = 85/173 (49%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R C C G L K+ ++GA F+GC +P C Y + SSD + + + N EP Sbjct: 606 RTCQVCGTGKLSLKLGKYGA--FVGCSNYPECNYTRQL--SSDSNGDAEAAVSN----EP 657 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 + LG + + E+I L+SG +G YVQ G+ G KRAS+P +I E AL LL Sbjct: 658 QSLGKDPHTGEEITLRSGRFGPYVQRGD---GKDAKRASLPKGWTPATIDHEKALALLSL 714 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +GKHP+ G + + + G + + A + I L +A+ L+ Sbjct: 715 PRDIGKHPETGKMISTGIGRYGPFVLHDGTYANLESVEDVFSIGLNRAVSALA 767 [155][TOP] >UniRef100_A9CJ93 DNA topoisomerase n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CJ93_AGRT5 Length = 892 Score = 82.8 bits (203), Expect = 2e-14 Identities = 48/142 (33%), Positives = 74/142 (52%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+C C G L K+ ++GA F+GC +P C Y T + D E D N EP Sbjct: 606 RICQVCGTGNLSLKLGKYGA--FVGCSNYPECNY---TRQLTSDGAEADAAASN----EP 656 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG + + E++ L+SG +G Y+Q G+ ++ KR+S+P + I E AL L+ Sbjct: 657 KALGADPMTGEELTLRSGRFGPYIQRGDGKEA---KRSSLPKGWKPEDIDHEKALALINL 713 Query: 404 PLTLGKHPKDGHPVILKVAKGG 469 P +GKHP+ G + + + G Sbjct: 714 PRDIGKHPETGKMISAGLGRYG 735 [156][TOP] >UniRef100_A5CF60 DNA topoisomerase n=1 Tax=Orientia tsutsugamushi str. Boryong RepID=A5CF60_ORITB Length = 788 Score = 82.8 bits (203), Expect = 2e-14 Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 ++C C G L K+S++GA F+ C+ +P C + + +++D + N Sbjct: 596 KLCTLCKVGKLSLKLSKYGA--FLACNNYPSCNFTRNIAAAFENNDNLPKGKNN------ 647 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGED--RKGYTPKRASVPHV-KDVDSITLEDALVL 394 K +G++ + I LK GP+G Y+Q GED K PKR + + ITLE A+ L Sbjct: 648 KAIGYSDDMQKTIYLKEGPFGWYIQAGEDSTNKNDKPKRVPISVISSSPQDITLETAVKL 707 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +G +P + + V + G +++ K +PKN +++ +++++ Sbjct: 708 LALPKVIGLNPNTNKEITVAVGRYGPYLKHDGKFISIPKNYDYLNLSINDCIKIIT 763 [157][TOP] >UniRef100_Q2CAE0 DNA topoisomerase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CAE0_9RHOB Length = 870 Score = 82.8 bits (203), Expect = 2e-14 Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 9/182 (4%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP C EG L K SR G F+GC ++P C+Y T ++ ED Sbjct: 594 RECPLCKEGRLHLKTSRTGG--FVGCSRYPECRY---TRPIGGEEQSED----------- 637 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + G ++I L++G +G YVQ GE D K P RAS+P D++ LE AL L Sbjct: 638 RVLGVDDG--DEISLRTGRFGPYVQRGEVTEDNK--KPPRASLPKGWAPDAMDLEKALRL 693 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYR--DKIALVPKNTKPN----EITLEKALEL 556 L P +G HP+DG P+ + G + ++ D+ V N K EI + +A+EL Sbjct: 694 LSLPREVGLHPEDGQPIKANFGRFGPFLIHQKPDEAKPVYANLKDPDDVFEIGMNRAVEL 753 Query: 557 LS 562 L+ Sbjct: 754 LA 755 [158][TOP] >UniRef100_B5IY09 DNA topoisomerase n=1 Tax=Octadecabacter antarcticus 307 RepID=B5IY09_9RHOB Length = 888 Score = 82.8 bits (203), Expect = 2e-14 Identities = 55/152 (36%), Positives = 75/152 (49%), Gaps = 3/152 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C G L + +R G G FIGC +P CKY + DD P E Sbjct: 594 RLCPNCNVGRLSMRTARSG-GAFIGCSNYPECKY-TRAFGPPGQDDASGIPP------EG 645 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 K LG + G +KI + G +G Y Q GE D K P R SVP + +TLE A+ L Sbjct: 646 KELGVDDG--DKIWIHKGRFGPYAQRGEVTEDNK--KPNRQSVPKEWPPEDVTLETAVRL 701 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490 L P +G HP+DG V + + G I++ + Sbjct: 702 LSLPRLIGTHPEDGVNVFANIGRYGPYIKHAE 733 [159][TOP] >UniRef100_Q5LNX4 DNA topoisomerase n=1 Tax=Ruegeria pomeroyi RepID=Q5LNX4_SILPO Length = 880 Score = 82.4 bits (202), Expect = 2e-14 Identities = 50/132 (37%), Positives = 68/132 (51%), Gaps = 1/132 (0%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP C G L K SR G F+GC +P C+Y +DD E Sbjct: 625 RICPKCGTGQLHLKTSRTGG--FVGCGNYPECRYTRPISGDADDSAE------------- 669 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 +LLG + G ++I LK+G +G YVQ GE + P RAS+P + + LE ALVLL Sbjct: 670 RLLGEDGG--DEIWLKAGRFGPYVQRGEISEENKKPPRASLPRGWSAEDLDLEKALVLLS 727 Query: 401 YPLTLGKHPKDG 436 P +G+HP+ G Sbjct: 728 LPRQIGQHPEGG 739 [160][TOP] >UniRef100_Q2NB87 DNA topoisomerase n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NB87_ERYLH Length = 845 Score = 82.4 bits (202), Expect = 2e-14 Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 7/192 (3%) Frame = +2 Query: 8 ADYLFGSLPD--KSRVCPSCTE-----GTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYS 166 +DYLF D + R CP C + G L + R+GA F+ C +P CKY + Sbjct: 572 SDYLFPPTEDGTEPRACPLCRDEGREGGRLALRGGRYGA--FVACANYPECKYTRRFAQ- 628 Query: 167 SDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVP 346 P N + + ++G + + E I KSG +G YVQ+GE ++ KRAS+P Sbjct: 629 ---------PGGNESAADDGIMGQHPETGEDIERKSGRFGPYVQMGEGKEA---KRASIP 676 Query: 347 HVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPN 526 KD+D L+ A+ LL P +G HP+ G + + + G +R+ K + Sbjct: 677 --KDLDDFDLDWAVKLLDLPRIVGAHPETGKEIEAAIGRYGPYLRHDGKYGKLQSTRDVF 734 Query: 527 EITLEKALELLS 562 E+ + A+ +L+ Sbjct: 735 EVGMNAAVTILA 746 [161][TOP] >UniRef100_Q1GTU5 DNA topoisomerase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GTU5_SPHAL Length = 849 Score = 82.0 bits (201), Expect = 3e-14 Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 5/167 (2%) Frame = +2 Query: 14 YLFGSLPDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178 YLF PDKS R+CP+C G L + +FG FI C +P CK+ K S + Sbjct: 573 YLF---PDKSDGSDPRLCPNCGTGRLALRGGKFGP--FIACSNYPDCKFTRKFAQSGGNG 627 Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358 + ++ P+ LG + S ++ +SG +G Y+QLGE G KR+S+P Sbjct: 628 EADNGPET---------LGTDPESGLEVTKRSGRFGPYIQLGE---GSEAKRSSIPKDIP 675 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIA 499 + L+ AL LL P +G HP+ G P++ + + G + + K A Sbjct: 676 AEDFDLDYALRLLSLPREVGVHPESGKPIMAGLGRYGPYLLHDGKYA 722 [162][TOP] >UniRef100_Q11IM5 DNA topoisomerase n=1 Tax=Chelativorans sp. BNC1 RepID=Q11IM5_MESSB Length = 849 Score = 82.0 bits (201), Expect = 3e-14 Identities = 51/173 (29%), Positives = 84/173 (48%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP C G L K+ R+GA F+GC +P C Y + ++ + + + Sbjct: 603 RICPKCGAGKLSLKLGRYGA--FVGCSNYPECDYTRQL-----GENPAENGEAEAGLNGN 655 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K+LG + + E+I L+SG +G YVQ GE G KRA +P + + E A+ LL Sbjct: 656 KVLGTDPFTGEEITLRSGRFGPYVQRGE---GKDAKRAGLPKGWTPEDLDHEKAIALLSL 712 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +GKHP+ G + + + G + + A + + L +A+ LL+ Sbjct: 713 PRDVGKHPETGKMISAGIGRYGPFLLHDGTYANLETVEDVFSVGLNRAVSLLA 765 [163][TOP] >UniRef100_A6U807 DNA topoisomerase n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6U807_SINMW Length = 914 Score = 82.0 bits (201), Expect = 3e-14 Identities = 54/173 (31%), Positives = 85/173 (49%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+C C G L K+ ++GA F+GC +P C Y + SSD + + N EP Sbjct: 626 RICQVCGTGKLSLKLGKYGA--FVGCSNYPECNYTRQL--SSDSSGDAEAAASN----EP 677 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 + LG + + E+I L++G +G YVQ G+ ++ KRAS+P +I E AL LL Sbjct: 678 QSLGKDPHTGEEITLRNGRFGPYVQRGDGKEA---KRASLPKGWTPATIDHEKALALLSL 734 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P LG HP+ G + + + G + + A + I L +A +L+ Sbjct: 735 PRDLGPHPETGKMISAGIGRYGPFVLHNGTYANLESVEDVFSIGLNRATSVLA 787 [164][TOP] >UniRef100_C6QH43 DNA topoisomerase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QH43_9RHIZ Length = 920 Score = 82.0 bits (201), Expect = 3e-14 Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 6/152 (3%) Frame = +2 Query: 32 PDKS-----RVCPSCTEGTLIFKVS-RFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDT 193 PDK R+CP C +G L K+S ++GA FIGC +P C Y + S+++ + Sbjct: 606 PDKGDGSDPRLCPKCNQGRLSLKISGKYGA--FIGCGNYPECNYTRQLSQSANNGE---- 659 Query: 194 PQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSIT 373 + K+LG+N + L++G +G Y+QLGE PKR+S+P D ++ Sbjct: 660 -----AALDGKVLGYND-DGIAVALRTGRFGPYIQLGEATGDEKPKRSSIPKGIDAATLD 713 Query: 374 LEDALVLLQYPLTLGKHPKDGHPVILKVAKGG 469 E A+ LL P +G HP +G + + + G Sbjct: 714 FEKAMQLLSLPRDVGVHPTEGGMITASLGRFG 745 [165][TOP] >UniRef100_A7HX05 DNA topoisomerase n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HX05_PARL1 Length = 894 Score = 81.3 bits (199), Expect = 5e-14 Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 3/176 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CPSC G L KV RFGA F+GC +P CK+ + ++ +++ Sbjct: 601 RACPSCGNGILSLKVGRFGA--FVGCSNYPDCKFTRQLTVGAEGEEQAGD---------- 648 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQ---LGEDRKGYTPKRASVPHVKDVDSITLEDALVL 394 ++LG + + ++ LK+G +G YV+ LG+D K PKR+ +P + L+ AL L Sbjct: 649 RVLGTDPETGAEVSLKTGRFGPYVERAPLGDDEK---PKRSGLPAKMSAADVDLDTALRL 705 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P +G HP+ G + + + G + + A + + +I L +A+ +L+ Sbjct: 706 LTLPREIGIHPETGKKITAGLGRFGPFVLHDGTYANLKDPEELFDIGLNRAIAVLA 761 [166][TOP] >UniRef100_C7DBD0 DNA topoisomerase n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DBD0_9RHOB Length = 881 Score = 81.3 bits (199), Expect = 5e-14 Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 5/164 (3%) Frame = +2 Query: 14 YLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187 +LF D S R+CP+C EG L + +R G G FIGC ++P C+Y + + E Sbjct: 581 HLFPPTEDGSDPRLCPNCNEGRLSMRTARSG-GAFIGCSRYPDCRY-TRAFGPPGTEPES 638 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKD 358 P E K+LG ++G +KI + G +G Y Q GE D K P R SVP Sbjct: 639 AIPP------EGKILGEDAG--DKIWIHKGRFGPYAQRGEVTEDNK--KPPRQSVPADWA 688 Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490 + +TLE A+ LL P LG HP+DG V + + G +++ + Sbjct: 689 PEDVTLETAVKLLALPRELGPHPEDGVTVWANIGRYGPYLKHAE 732 [167][TOP] >UniRef100_Q2W9I9 DNA topoisomerase n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W9I9_MAGSA Length = 898 Score = 80.9 bits (198), Expect = 7e-14 Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 23/196 (11%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP+C G L K+ +FGA FIGC +P C++ + L + + +EE E P Sbjct: 603 RSCPTCNAGRLSLKLGKFGA--FIGCSAYPECRF-TRPLTTGGEGEEE-------VREGP 652 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-----------------------KGYTPKR 334 K LG + S + L+ GPYG YVQLG++ K PKR Sbjct: 653 KELGNDPESGLPVTLRKGPYGHYVQLGDETTLKAEPAPVPEKGKKAPKTAKAVKAPKPKR 712 Query: 335 ASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKN 514 S+ + +TL+ A LL P +G HP+ G + V + G + + + K+ Sbjct: 713 VSLYKGLEPAGVTLDIACRLLALPRLVGTHPETGKSISAGVGRFGPYVVHDGVYKSLAKD 772 Query: 515 TKPNEITLEKALELLS 562 I + +A+ELLS Sbjct: 773 DDVLVIGMNRAMELLS 788 [168][TOP] >UniRef100_C1ZEL8 DNA topoisomerase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZEL8_PLALI Length = 895 Score = 80.9 bits (198), Expect = 7e-14 Identities = 50/160 (31%), Positives = 80/160 (50%) Frame = +2 Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262 ++ +FGA + D P I + +D +E + P+ LG + S I Sbjct: 618 RLGKFGAFFEGERDGQPVTATIPDDIAPADLTNELAEKLITQKSQGPQSLGIDPESGLPI 677 Query: 263 LLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHP 442 L GP+G Y+QLGE + G P+R S+P +DV ++ LEDAL ++ P LG HP+ G Sbjct: 678 FLLIGPFGPYLQLGEMKDGEKPRRVSIPKTRDVSTVKLEDALEYMKLPKALGPHPETGKV 737 Query: 443 VILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 V + G + + + K ++T+E+ALELL+ Sbjct: 738 VKAGIGMYGPYVHHDKTYKSLDKTDDILQMTMERALELLA 777 [169][TOP] >UniRef100_B6IN35 DNA topoisomerase n=1 Tax=Rhodospirillum centenum SW RepID=B6IN35_RHOCS Length = 930 Score = 80.1 bits (196), Expect = 1e-13 Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 1/149 (0%) Frame = +2 Query: 41 SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEE 220 +RVCP+C G L K+ + G FIGC +P C+Y + + + E Sbjct: 607 ARVCPTCGTGRLSLKLGKSGG--FIGCSNYPECRYTRPLSVAGEGGEAESGD-------- 656 Query: 221 PKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLL 397 ++LG + ++ + +K+G +G YVQLG D K PKRAS+P ++ L+ AL LL Sbjct: 657 -RMLGNDPETSLPVWVKTGRFGAYVQLGNGDGKEEKPKRASLPRGMLPATMDLDTALRLL 715 Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRY 484 P +LG HP+ G ++ + + G +++ Sbjct: 716 ALPRSLGTHPESGLEIVAGIGRYGPYLKH 744 [170][TOP] >UniRef100_A4EEH4 DNA topoisomerase n=1 Tax=Roseobacter sp. CCS2 RepID=A4EEH4_9RHOB Length = 866 Score = 80.1 bits (196), Expect = 1e-13 Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 3/152 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C G L + +R G G FIGC +P C+Y + + + P E Sbjct: 593 RLCPNCGAGRLSMRTARSG-GAFIGCSNYPECRYTRAFGPPNPEAELSAIPP------EG 645 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 KLLG + G ++I + G +G Y Q GE D K PKR S+P + + +TL+ AL+L Sbjct: 646 KLLGTDEG--DEIRIFKGRFGPYAQRGEVTEDNK--KPKRQSIPDGWEPEEVTLDQALML 701 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490 L P LG HP+DG V + + G +++ + Sbjct: 702 LSLPRELGPHPEDGVAVWANLGRYGPYLKHAE 733 [171][TOP] >UniRef100_Q1YNI1 DNA topoisomerase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YNI1_MOBAS Length = 923 Score = 79.7 bits (195), Expect = 1e-13 Identities = 50/173 (28%), Positives = 83/173 (47%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP C G L K+ +FGA F+GC +P C Y + + D E P Sbjct: 609 RACPRCGNGQLSLKLGKFGA--FVGCSNYPDCGYTRQLGTNMSGDGA-------AMDEGP 659 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 LG + + E + L++G +G YVQ GE ++ KR+S+P + L+ AL LL Sbjct: 660 SDLGVDPETGEPVTLRTGRFGPYVQRGEGKEA---KRSSLPKGWQASEMDLDKALRLLSL 716 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+ G P++ + + G + + A + E+ L +A+ +++ Sbjct: 717 PREVGLHPESGKPILAGLGRYGPFLNHDGMYANLETIEDVFEVGLNRAVTVIA 769 [172][TOP] >UniRef100_A3UJW6 DNA topoisomerase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UJW6_9RHOB Length = 884 Score = 79.7 bits (195), Expect = 1e-13 Identities = 49/172 (28%), Positives = 87/172 (50%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 +VCP C EG L ++ + GA F+GC +P C+Y + L + D + Sbjct: 599 KVCPKCNEGALSLRLGKHGA--FVGCSNYPDCRY-TRPLGGGELD----------AVAGD 645 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 LG + + I+LK G +G Y+++ + + P+R S+P D SITLE A+ L+ Sbjct: 646 GELGEHPETGAMIVLKDGRFGPYLEMQVEDED-KPRRGSIPKGWDPASITLEKAVALIDL 704 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 P +G HP+DG + + + G +++ A + + E+ L +A++L+ Sbjct: 705 PRKVGPHPEDGEMIEAGIGRYGPFVKHGKTYANLANADEVFEVGLNRAVDLI 756 [173][TOP] >UniRef100_A3SIS1 DNA topoisomerase n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SIS1_9RHOB Length = 868 Score = 79.7 bits (195), Expect = 1e-13 Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 2/175 (1%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP C EG L K SR G F+GC +P C+Y + D+ + Sbjct: 593 RICPLCGEGKLHLKTSRSGG--FVGCGNYPECRYTRPIGGEAGDNGD------------- 637 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE--DRKGYTPKRASVPHVKDVDSITLEDALVLL 397 ++LG ++G ++I L+SG +G YVQ GE + P RAS+P + L+ AL+LL Sbjct: 638 RVLGEDNG--DEISLRSGRFGPYVQRGEATEENNKKPPRASLPKGWQPAEMDLDKALLLL 695 Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+DG + + + G +++ A + + + + +A+E+L+ Sbjct: 696 SLPREVGPHPEDGELIEAGIGRYGPFVKHGRTYANLESVDEVFTVGMNRAVEVLA 750 [174][TOP] >UniRef100_A3TZ47 DNA topoisomerase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZ47_9RHOB Length = 867 Score = 79.0 bits (193), Expect = 2e-13 Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 3/162 (1%) Frame = +2 Query: 14 YLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187 +LF D S R+CP C G L + +R G G FIGC +P C+Y + D + E Sbjct: 580 HLFPPTEDGSDPRLCPHCGAGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDAEAE 636 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364 + E KLLG + G ++I + G +G YVQ GE + P R SVP + Sbjct: 637 ----ASAIPPEGKLLGVDDG--DEIRVFKGRFGPYVQRGEVTEENKKPPRQSVPKDWVPE 690 Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490 +TLE ++LL P +G+HP+DG V + + G I++ + Sbjct: 691 DLTLEQGVMLLTLPRLIGQHPEDGVSVWANIGRYGPYIKHAE 732 [175][TOP] >UniRef100_C6WSV7 DNA topoisomerase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WSV7_METML Length = 864 Score = 78.2 bits (191), Expect = 4e-13 Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 5/176 (2%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQH---PRCKYIAKTLYSSDDDDEEDTPQQNTTIEE 220 CP C + L ++SRFG+ FIGC + P+C Y + T T + Sbjct: 587 CPKCGK-PLQKQLSRFGS--FIGCTGYNDTPKCDYKRSI---------DGTANAGT---D 631 Query: 221 PKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT--PKRASVPHVKDVDSITLEDALVL 394 P +G ++ ++++I L +GPYG Y+Q+G +G PKR S+P + + LE A +L Sbjct: 632 PVSIGVDAATSKEIYLMNGPYGPYLQVGMAVEGEKKKPKRVSIPKEIALADVNLETANML 691 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 L P LG HP+ +I + + G I + K +PKN I L+ A+ LL+ Sbjct: 692 LSLPRDLGLHPETNKKIIANIGRFGPYINHDAKFKSIPKNLSVFSIDLDGAVALLA 747 Score = 55.5 bits (132), Expect = 3e-06 Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 7/127 (5%) Frame = +2 Query: 203 NTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLED 382 N + P+ LG + +N+KI+ G +G Y+ + K S+P V SI L+ Sbjct: 689 NMLLSLPRDLGLHPETNKKIIANIGRFGPYIN-------HDAKFKSIPKNLSVFSIDLDG 741 Query: 383 ALVLLQYPLT-------LGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541 A+ LL T LG HP + + + + G +++ A +PK+ +P +T+E Sbjct: 742 AVALLAQAHTGPAPLCSLGSHPTEDGQIEVFAGRYGPYVQHGKLRATLPKSIEPESLTME 801 Query: 542 KALELLS 562 +ALELLS Sbjct: 802 EALELLS 808 [176][TOP] >UniRef100_C6V581 DNA topoisomerase n=1 Tax=Neorickettsia risticii str. Illinois RepID=C6V581_NEORI Length = 827 Score = 78.2 bits (191), Expect = 4e-13 Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 2/172 (1%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229 CP C +G + VSR+G F+GC +P C++I + YS+DDD E PK Sbjct: 601 CPKCEKGYMHLSVSRYGV--FLGCTNYPVCRFIVNS-YSTDDDTEY-----------PKQ 646 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALV--LLQY 403 + + I L GPYGIY++ Y K +S+P KDVD +++++ + Sbjct: 647 IA------QDISLHKGPYGIYLK-------YKGKNSSIP--KDVDPVSIDEEFAHKIASL 691 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 P LGKHP DG + + + G + + K + + ++ +E+TL+KA++ + Sbjct: 692 PKILGKHPADGKEIKMGLGPYGLYLFWNAKYYNL-QFSQMDEMTLDKAVQFI 742 [177][TOP] >UniRef100_Q2S3I6 DNA topoisomerase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3I6_SALRD Length = 862 Score = 77.8 bits (190), Expect = 6e-13 Identities = 48/164 (29%), Positives = 79/164 (48%) Frame = +2 Query: 68 GTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSG 247 G + +V ++GA D I L D +E ++LG + Sbjct: 625 GEYVVRVGKYGAYVEGEMDGATVTASIPDDLAPGDTTEERLREILEEANRGDRVLGIHPE 684 Query: 248 SNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHP 427 ++ +LLKSGPYG YVQLG+D + PKR S+P + + + + + ++ P TLG+HP Sbjct: 685 ASLPVLLKSGPYGPYVQLGDDEEEDDPKRVSLPPDVEPEDVDFDLGVRIVDLPRTLGEHP 744 Query: 428 KDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 G + + + G +R+ A + K E+ LE+ALEL+ Sbjct: 745 DTGKEIEADIGRYGPYVRHEGTFASLQKGDDVLEVGLERALELI 788 [178][TOP] >UniRef100_C8NB53 DNA topoisomerase 1 (DNA topoisomerase I) n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NB53_9GAMM Length = 790 Score = 77.8 bits (190), Expect = 6e-13 Identities = 42/134 (31%), Positives = 78/134 (58%) Frame = +2 Query: 161 YSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRAS 340 +S D+++D P++ + + + LG + S + + ++ G +G +VQ+G P+ AS Sbjct: 557 FSHQLDEKKDIPREE--VMQARELGTDPKSGKPVSVRFGRFGPFVQIGSKDDEEKPQFAS 614 Query: 341 VPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTK 520 +P +++D ITLE+AL L + P +G +DG ++ + + G +RY + +PK Sbjct: 615 IPSDRNMDEITLEEALELFKLPRVVGHSEEDGE-IVTSIGRFGPYVRYGKRYVSLPKEED 673 Query: 521 PNEITLEKALELLS 562 P ITLE+ALEL++ Sbjct: 674 PLTITLERALELIA 687 [179][TOP] >UniRef100_A9HBK4 DNA topoisomerase n=1 Tax=Roseobacter litoralis Och 149 RepID=A9HBK4_9RHOB Length = 878 Score = 77.8 bits (190), Expect = 6e-13 Identities = 53/150 (35%), Positives = 72/150 (48%), Gaps = 3/150 (2%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C G L + +R G G FIGC +P C+Y ++DD P E Sbjct: 594 RLCPNCGAGRLSMRTARSG-GAFIGCSNYPECRYTRAFGPPGEEDDSGIPP-------EG 645 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 KLLG +KI G +G YVQ GE D K P R S+P + + L AL L Sbjct: 646 KLLG--EDGEDKIYAFKGRFGPYVQRGEVTEDNK--KPPRQSIPKDWPPEDVDLPQALKL 701 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRY 484 L P +G HP+DG V + + G I++ Sbjct: 702 LSLPREIGPHPEDGITVWANIGRYGPYIKH 731 [180][TOP] >UniRef100_A5PDV3 DNA topoisomerase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDV3_9SPHN Length = 853 Score = 77.8 bits (190), Expect = 6e-13 Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 7/192 (3%) Frame = +2 Query: 8 ADYLFGSLPDKS--RVCPSC-TEGT----LIFKVSRFGAGYFIGCDQHPRCKYIAKTLYS 166 +DYLF D R CP C TEG L + R+GA F+ C +P CK+ + Sbjct: 572 SDYLFPERADGKDPRHCPLCETEGREGGRLALRGGRYGA--FVACANYPECKFTRQFAKP 629 Query: 167 SDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVP 346 D D+ + ++G + + + K+G +G Y+QLGE G KRAS+P Sbjct: 630 GSDGDDG---------ADDGVMGKDPETGLPVERKTGRFGPYIQLGE---GKDAKRASIP 677 Query: 347 HVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPN 526 KD+D LE AL LL P +G HP+ G + + + G +R+ K A + Sbjct: 678 --KDLDDFDLEWALKLLSLPRIVGAHPETGKEIEANIGRYGPYLRHDGKYAKLTSTRDVF 735 Query: 527 EITLEKALELLS 562 E + A+ LL+ Sbjct: 736 ETGMNAAVSLLA 747 [181][TOP] >UniRef100_Q98LX0 DNA topoisomerase n=1 Tax=Mesorhizobium loti RepID=Q98LX0_RHILO Length = 873 Score = 77.4 bits (189), Expect = 7e-13 Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 2/145 (1%) Frame = +2 Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175 + A +F + D S R+CP C G L K+ +FGA F+GC +P C + + +++ Sbjct: 587 ELAPLVFPAREDGSNPRICPKCGTGNLSLKLGKFGA--FVGCSNYPECSFTRQLGDAANP 644 Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355 + E T K+LG + + E+I L+SG +G Y+Q G+ G KR+S+P Sbjct: 645 NGENGGGDDGT-----KVLGKDPYTAEEITLRSGRFGPYLQRGD---GKDAKRSSLPKGW 696 Query: 356 DVDSITLEDALVLLQYPLTLGKHPK 430 ++I E AL LL P +GKHP+ Sbjct: 697 TPETIDHEKALALLALPRDIGKHPE 721 [182][TOP] >UniRef100_D0CWX9 DNA topoisomerase I n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CWX9_9RHOB Length = 871 Score = 77.4 bits (189), Expect = 7e-13 Identities = 62/180 (34%), Positives = 88/180 (48%), Gaps = 7/180 (3%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP C G L K SR G F+GC +P C Y + +E Sbjct: 618 RICPKCGVGRLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEGEE------------- 662 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVKDVDSITLEDALVLLQ 400 +LLG + ++I LKSG +G YVQ GE + P RAS+P + D + LE AL LL Sbjct: 663 RLLGVDG--EDEIWLKSGRFGPYVQRGEATPENKKPPRASLPKGWNKDDMDLEKALTLLS 720 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYR--DKIALVPKNTK-PN---EITLEKALELLS 562 P +G+HP +G + + G I ++ D+ V N K PN EI + +A+ELL+ Sbjct: 721 LPREIGEHP-EGGMISANFGRFGPYIMHQLPDEAKPVYANLKDPNDVFEIGMNRAVELLA 779 [183][TOP] >UniRef100_B9NPP1 DNA topoisomerase n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NPP1_9RHOB Length = 873 Score = 77.4 bits (189), Expect = 7e-13 Identities = 63/179 (35%), Positives = 86/179 (48%), Gaps = 6/179 (3%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP C G L K SR G F+GC +P C Y + DE Sbjct: 616 RICPKCGMGQLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEGDE------------- 660 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVKDVDSITLEDALVLLQ 400 +LLG ++G ++I LKSG +G YVQ GE + P RAS+P D + L AL LL Sbjct: 661 RLLGEDAG--DEIWLKSGRFGPYVQRGEPTPENKKPPRASLPRGWSKDDMDLGKALTLLS 718 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSI-RYRDKIALVPKNTK-PN---EITLEKALELLS 562 P +G+HP+ G G Y + + D+ V N K PN EI + +A+ELL+ Sbjct: 719 LPRQIGEHPEGGMISSNFGRFGPYLMHQLADEAKPVYANLKDPNDVFEIGMNRAVELLA 777 [184][TOP] >UniRef100_A6FU07 DNA topoisomerase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FU07_9RHOB Length = 839 Score = 77.4 bits (189), Expect = 7e-13 Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 1/174 (0%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP C EG+L K SR G F+GC ++P C++ + + Sbjct: 593 RSCPLCGEGSLHLKTSRTGG--FVGCSRYPECRFTRPIGGEGAEGGD------------- 637 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 ++LG + G ++I L+SG +G YVQ GE + P RAS+P D + LE AL+LL Sbjct: 638 RVLGEDQG--DEISLRSGRFGPYVQRGEVTEENKKPPRASLPKGWSPDDMDLEKALMLLN 695 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+DG V + + G +++ A + I + +A+E L+ Sbjct: 696 LPREIGPHPEDGEMVEAGIGRYGPFVKHGKLYANLKDPDDVFTIGMNRAVEELA 749 [185][TOP] >UniRef100_Q167W6 DNA topoisomerase n=1 Tax=Roseobacter denitrificans OCh 114 RepID=Q167W6_ROSDO Length = 878 Score = 77.0 bits (188), Expect = 9e-13 Identities = 52/150 (34%), Positives = 73/150 (48%), Gaps = 3/150 (2%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C G L + +R G G FIGC +P C+Y ++DD P E Sbjct: 594 RLCPNCGAGRLSMRTARSG-GAFIGCSNYPECRYTRAFGPPGEEDDSGIPP-------EG 645 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 KLLG ++KI G +G YVQ GE D K P R S+P + + L AL L Sbjct: 646 KLLG--EDGDDKIYAFKGRFGPYVQRGEVTEDNK--KPPRQSIPKDWPPEDVDLPQALKL 701 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRY 484 L P +G HP+DG V + + G +++ Sbjct: 702 LSLPREIGPHPEDGIMVWANIGRYGPYLKH 731 [186][TOP] >UniRef100_Q2GKB4 DNA topoisomerase n=1 Tax=Anaplasma phagocytophilum HZ RepID=Q2GKB4_ANAPZ Length = 811 Score = 76.6 bits (187), Expect = 1e-12 Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 2/185 (1%) Frame = +2 Query: 11 DYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 184 +Y F S+ +S RVCP C G L+ + + A F+GC+++P C+Y D Sbjct: 585 NYAFSSVDGESISRVCPQCGSGELMLNIGKTSA--FLGCNRYPECRYTRGI-----GGDG 637 Query: 185 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 364 +P + + ++LG + + E+I LK GPYG Y+QLG + KR S+ K Sbjct: 638 SASPADDAS----RILGIDEETQEEIFLKRGPYGEYLQLGN-----STKRVSL--TKSAG 686 Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEK 544 IT++ A +L PL LG +P + L + + G + Y + I+ ++ Sbjct: 687 EITVDLAKKMLSLPLVLGCYPDTDKEIKLGIGRFGPYLFYNGVYFSIKDREDYINISHQE 746 Query: 545 ALELL 559 A+E++ Sbjct: 747 AVEII 751 [187][TOP] >UniRef100_Q4C5N4 DNA topoisomerase n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C5N4_CROWT Length = 880 Score = 76.6 bits (187), Expect = 1e-12 Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 6/166 (3%) Frame = +2 Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262 K+ +FG + ++ I L SD D E+ E P+ LG + + E I Sbjct: 611 KIGKFGPYVEVLQEEEKITASIPTDLTPSDLDPEQINKLLKQKTEGPQKLGLHPENGEAI 670 Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439 + G YG YVQLGE + PKRAS+P +VD +TL+ A+ LL P LG HP+ G Sbjct: 671 YILIGSYGPYVQLGEASEENKKPKRASLPKGTNVDDVTLDMAVGLLALPRLLGTHPETGA 730 Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562 + + + G Y + + K ++ K + ITLE+ALELL+ Sbjct: 731 KIKASLGRFGPYVVHDQGKEGKDYRSLKKEDDVLTITLERALELLA 776 [188][TOP] >UniRef100_A3V7A4 DNA topoisomerase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V7A4_9RHOB Length = 870 Score = 76.6 bits (187), Expect = 1e-12 Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 1/148 (0%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C G L + +R G G FIGC +P C+Y + D + E ++ + Sbjct: 592 RLCPNCGAGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDPEAE----KSAIPPDG 644 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT-PKRASVPHVKDVDSITLEDALVLLQ 400 KLLG ++G ++I + G +G YVQ G + P R VP + + LE AL LLQ Sbjct: 645 KLLGHDAG--DEIRIFKGRFGPYVQRGATSEANPKPDRTGVPEGWPAEEVDLEQALRLLQ 702 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRY 484 P +G HP+DG V + + G +++ Sbjct: 703 LPRQIGLHPEDGIMVWANIGRYGPYLKH 730 [189][TOP] >UniRef100_A3JR62 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JR62_9RHOB Length = 870 Score = 76.6 bits (187), Expect = 1e-12 Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 1/174 (0%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 + CP C EG L K SR G F+GC +P C+Y D D D Sbjct: 593 KTCPLCGEGKLHLKSSRSGG--FVGCGNYPECRYTRPI--GGDAADGGD----------- 637 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 ++LG ++G ++I L++G +G Y+Q G+ + P RAS+P D++ LE AL+LL Sbjct: 638 RVLGEDAG--DEISLRTGRFGPYIQRGQVTEEVKKPLRASLPKGWAPDNMDLEKALMLLS 695 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 P +G HP+D PV + + G +++ A + + + + +A+EL++ Sbjct: 696 LPRLIGPHPEDQEPVEAGLGRYGPYVKHGRTFASLSDAEELFTVGMNRAVELIA 749 [190][TOP] >UniRef100_UPI0000E87F44 DNA topoisomerase I n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87F44 Length = 828 Score = 76.3 bits (186), Expect = 2e-12 Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 3/173 (1%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGA-GYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPK 226 CP C + L S+ G G F+ C +P C + + D PQ EPK Sbjct: 590 CPKCNKPLL----SKLGKRGNFVACSGYPDCDFTRSS--------NGDLPQ------EPK 631 Query: 227 LLGFNSGSNEKILLKSGPYGIYVQLG--EDRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 ++G + + + I L GPYG Y+QLG ED PKR ++P + + A L+ Sbjct: 632 IVGEDELTKKSIYLLIGPYGPYLQLGIPEDGDKVKPKRTTIPPEIALADLDETVAKKLIS 691 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 P LG+HP+ G ++ + + G + + K +PK +I+ E A++LL Sbjct: 692 LPRELGEHPETGKLILANIGRFGPYVNHNGKFKSIPKTENVFDISFETAVDLL 744 [191][TOP] >UniRef100_A6DUX6 DNA topoisomerase n=1 Tax=Roseovarius sp. TM1035 RepID=A6DUX6_9RHOB Length = 901 Score = 76.3 bits (186), Expect = 2e-12 Identities = 62/180 (34%), Positives = 89/180 (49%), Gaps = 7/180 (3%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP C G L K SR G F+GC +P C+Y D + D Sbjct: 620 RQCPLCGTGQLHLKTSRSGG--FVGCGNYPECRYTRPI--GGDAGENGD----------- 664 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 ++LG + NE I L+SG +G YVQ GE + P RAS+P +++TLE AL LL Sbjct: 665 RILGQDEAGNE-ISLRSGRFGPYVQRGEATEENKKPDRASLPKGWTAEAMTLEKALTLLS 723 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYR--DKIALVPKNTK-PN---EITLEKALELLS 562 P +G+HP +G + + G + ++ D+ V N K PN EI + +A+ELL+ Sbjct: 724 LPRDVGQHP-EGGMISANFGRFGPYLMHQLPDEAKPVYANLKDPNDVFEIGMNRAVELLA 782 [192][TOP] >UniRef100_A4EQ09 DNA topoisomerase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EQ09_9RHOB Length = 894 Score = 76.3 bits (186), Expect = 2e-12 Identities = 58/176 (32%), Positives = 82/176 (46%), Gaps = 5/176 (2%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 RVCP C G L K SR G F+GC +P C Y + +E Sbjct: 613 RVCPKCGAGQLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEGEE------------- 657 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVKD----VDSITLEDAL 388 KLLG S ++I LK G YG YVQ GE + PKR+S+P + + TLE AL Sbjct: 658 KLLG--SDGEDEIWLKDGRYGPYVQRGEATPENKKPKRSSLPQTRHGGWPKEETTLERAL 715 Query: 389 VLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556 LL P +G HP+ G + + + G I ++ +P+ KP + L++ E+ Sbjct: 716 QLLSLPRNVGDHPEGGR-ISANLGRFGPYIMHK-----LPEAEKPTYVNLKQWHEM 765 [193][TOP] >UniRef100_B6B192 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B192_9RHOB Length = 867 Score = 75.9 bits (185), Expect = 2e-12 Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 5/176 (2%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 RVCP C G L K SR G F+GC +P C Y D +E+ Sbjct: 593 RVCPKCGLGNLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGADGEEQ------------ 638 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK----DVDSITLEDAL 388 LLG + G ++I LKSG +G YVQ GE + PKR S+P + D TLE A+ Sbjct: 639 -LLGTDEG--DEIWLKSGRFGPYVQRGEVTPENKKPKRTSLPQARHGGWDKADTTLEKAI 695 Query: 389 VLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556 LL P +G+HP+ G + G + K+ K T N T ++ E+ Sbjct: 696 KLLSLPRGIGEHPEGGR---ISANLGRFGPYIMHKLPNAEKPTYVNVKTWDEMFEV 748 [194][TOP] >UniRef100_A9E167 DNA topoisomerase n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E167_9RHOB Length = 885 Score = 75.9 bits (185), Expect = 2e-12 Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 3/162 (1%) Frame = +2 Query: 14 YLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187 +LF D S R+CP+C G L + +R G G FIGC +P C+Y + D + E Sbjct: 579 HLFPPTEDGSDPRLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDPEAE 635 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364 + + KLLG + G ++I + G +G YVQ G + P R S+P + Sbjct: 636 ----ASAIPPDGKLLGEDQG--DEIRVFKGRFGPYVQRGPVTEENKKPPRQSIPKDWPAE 689 Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490 +TLE ++LL P +G HP+DG V + + G I++ + Sbjct: 690 EVTLEQGVMLLSLPRQIGPHPEDGVMVWSNIGRYGPYIKHAE 731 [195][TOP] >UniRef100_B4B237 DNA topoisomerase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B237_9CHRO Length = 879 Score = 75.1 bits (183), Expect = 4e-12 Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 6/166 (3%) Frame = +2 Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262 K+ RFG + + I L +D D E+ E P+ +GF+ + E I Sbjct: 611 KIGRFGPYVEVQNGEEVVTASIPTELTPADLDPEKVELLLKQKTEGPEKVGFHPETGEPI 670 Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439 + G YG YVQLGE + PKR S+P + +TLE A+ LL P TLG HP+ G Sbjct: 671 YMLIGTYGPYVQLGEVTEENKKPKRGSLPKGVKPEDVTLEMAVNLLSLPRTLGSHPETGA 730 Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562 + + + + G Y + + K ++ K ++ ITLE+ALELLS Sbjct: 731 KIQVNLGRFGPYVVHDQGKEGKDYRSLKASDDLFTITLERALELLS 776 Score = 57.0 bits (136), Expect = 1e-06 Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 17/131 (12%) Frame = +2 Query: 221 PKLLGFNSGSNEKILLKSGPYGIYV--QLGEDRKGYTPKRASVPHVKDVDSITLEDALVL 394 P+ LG + + KI + G +G YV G++ K Y +AS D+ +ITLE AL L Sbjct: 719 PRTLGSHPETGAKIQVNLGRFGPYVVHDQGKEGKDYRSLKAS----DDLFTITLERALEL 774 Query: 395 LQYPLT---------------LGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNE 529 L P LG HPKD PV + G +++ A +P+ P+ Sbjct: 775 LSEPKKGRGGGRSTTKKPLKELGLHPKDNEPVNIYDGPYGAYVKHGKTNAKMPEGETPDT 834 Query: 530 ITLEKALELLS 562 +TLEKALE L+ Sbjct: 835 LTLEKALEALA 845 [196][TOP] >UniRef100_A3SYM3 DNA topoisomerase n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SYM3_9RHOB Length = 888 Score = 75.1 bits (183), Expect = 4e-12 Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 1/150 (0%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C G L + +R G G FIGC +P C+Y + D + E + + Sbjct: 592 RLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDPEAE----ASAIPPDG 644 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 KLLG + G ++I + G +G YVQ G + P R SVP + + LE A++LL Sbjct: 645 KLLGEDMG--DEIRVFKGRFGPYVQRGPVTEENKKPPRQSVPKDWPAEELELERAVMLLS 702 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490 P +G HP+DG V + + G I++ D Sbjct: 703 LPREIGPHPEDGVMVWANIGRYGPYIKHAD 732 [197][TOP] >UniRef100_A3SF48 DNA topoisomerase n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SF48_9RHOB Length = 888 Score = 75.1 bits (183), Expect = 4e-12 Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 1/150 (0%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C G L + +R G G FIGC +P C+Y + D + E + + Sbjct: 592 RLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDPEAE----ASAIPPDG 644 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 KLLG + G ++I + G +G YVQ G + P R SVP + + LE A++LL Sbjct: 645 KLLGEDMG--DEIRVFKGRFGPYVQRGPVTEENKKPPRQSVPKDWPAEELELERAVMLLS 702 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490 P +G HP+DG V + + G I++ D Sbjct: 703 LPREIGPHPEDGVMVWANIGRYGPYIKHAD 732 [198][TOP] >UniRef100_C1E9E3 DNA topoisomerase n=1 Tax=Micromonas sp. RCC299 RepID=C1E9E3_9CHLO Length = 1227 Score = 75.1 bits (183), Expect = 4e-12 Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 9/157 (5%) Frame = +2 Query: 41 SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEE 220 +R CP C G L K+SR G FIGC +P C + + + +D + N IE Sbjct: 818 TRRCPGCGTGRLGLKLSRTGG--FIGCSNYPSCGHTRQLV----NDGDGAVGGGNFPIE- 870 Query: 221 PKLLGFNSGSNEKILLKSGPYGIYVQLG-----EDRKGYTPKRASVPHV----KDVDSIT 373 LG + S + +++GPYG Y++L +D K P+R + ++ +DVD Sbjct: 871 ---LGTDPESGGDVAIQNGPYGPYIELQMPSSPDDSKKTKPQRFGLKNIGLKPEDVD--- 924 Query: 374 LEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRY 484 ++ A+ LL+YP+ LG HP+DG V++ + G+ + + Sbjct: 925 MDLAMTLLRYPMVLGPHPEDGKDVVMNMGPFGWYVSH 961 [199][TOP] >UniRef100_B7RLF8 DNA topoisomerase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RLF8_9RHOB Length = 881 Score = 74.7 bits (182), Expect = 5e-12 Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C G L + +R G G FIGC +P C+Y + D + E + + Sbjct: 592 RLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDPEAE----ASAIPPDG 644 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 KLLG + G ++I + G +G YVQ G + P R SVP + + LE AL+LL Sbjct: 645 KLLGEDQG--DEIRVFKGRFGPYVQRGPVTEENKKPPRQSVPKDWPAEELDLERALMLLS 702 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRY 484 P +G HP+DG V + + G I++ Sbjct: 703 LPREIGPHPEDGIMVWANIGRYGPYIKH 730 [200][TOP] >UniRef100_B9JVI0 DNA topoisomerase n=1 Tax=Agrobacterium vitis S4 RepID=B9JVI0_AGRVS Length = 904 Score = 73.9 bits (180), Expect = 8e-12 Identities = 45/131 (34%), Positives = 67/131 (51%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+C C G L K+ ++GA F+GC +P C + + S+D E + EP Sbjct: 606 RICQVCGTGNLSLKLGKYGA--FVGCSNYPECNFTRQL--SADGGTEAEAVGN-----EP 656 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 K LG + + E+I L+SG +G YVQ G+ G KR+S+P + + AL LL Sbjct: 657 KALGEDPTTGEQITLRSGRFGPYVQRGD---GKEAKRSSLPKGWSPTDVDFDKALSLLSL 713 Query: 404 PLTLGKHPKDG 436 P +G HP+ G Sbjct: 714 PREVGLHPETG 724 [201][TOP] >UniRef100_A3K045 DNA topoisomerase n=1 Tax=Sagittula stellata E-37 RepID=A3K045_9RHOB Length = 889 Score = 73.9 bits (180), Expect = 8e-12 Identities = 59/179 (32%), Positives = 83/179 (46%), Gaps = 8/179 (4%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP C +G L K SR G F+GC +P C Y + +E Sbjct: 620 RICPKCGQGRLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEGEE------------- 664 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVK-------DVDSITLE 379 KLLG + G ++I LK+G +G YVQ GE + P RAS+P D +TLE Sbjct: 665 KLLGEDQG--DEIWLKAGRFGPYVQRGEPTPENKKPPRASLPKKGGAYLPGWDPADMTLE 722 Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556 AL LL P +G HP DG V + + G I ++ +P KP + L++ E+ Sbjct: 723 KALTLLTMPREVGMHP-DGGVVSANLGRFGPYIMHQ-----LPDEEKPVYVNLKEFQEV 775 [202][TOP] >UniRef100_A8LHT2 DNA topoisomerase n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LHT2_DINSH Length = 900 Score = 73.6 bits (179), Expect = 1e-11 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 1/150 (0%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C G L + +R G G FIGC +P C+Y + ++ P E Sbjct: 632 RLCPNCEIGQLSMRTARSG-GAFIGCSNYPECRY-TRPFGPPGMEEASGIPP------EG 683 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 KLLG + G ++I + G +G YVQ G + P R S+P + + L+ A++LL Sbjct: 684 KLLGEDGG--DEIRVFKGRFGPYVQRGAVTEENKKPPRQSIPKSWVPEELELDKAVMLLS 741 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490 P +G HP DG PV + + G +++ D Sbjct: 742 LPRQIGLHPDDGVPVWANIGRYGPYLKHAD 771 [203][TOP] >UniRef100_Q0FRU2 DNA topoisomerase n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FRU2_9RHOB Length = 906 Score = 73.6 bits (179), Expect = 1e-11 Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 8/179 (4%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP C +G L K SR G F+GC +P C Y + +E Sbjct: 621 RICPKCGQGRLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEGEE------------- 665 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVKD-------VDSITLE 379 K+LG + ++I LK+G +G YVQ GE + P RAS+P + D +TLE Sbjct: 666 KMLGLDG--EDEIWLKAGRFGPYVQRGEPTPENKKPPRASLPKARGNFLPGWAPDDMTLE 723 Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556 AL LL P +G HP DG + + + G I ++ P KP + L++ E+ Sbjct: 724 KALTLLTLPREIGMHP-DGGVIKSNLGRFGPYIMHQ-----APDEEKPVYVNLKEFQEV 776 [204][TOP] >UniRef100_B5W1H4 DNA topoisomerase n=1 Tax=Arthrospira maxima CS-328 RepID=B5W1H4_SPIMA Length = 911 Score = 73.6 bits (179), Expect = 1e-11 Identities = 46/121 (38%), Positives = 69/121 (57%), Gaps = 5/121 (4%) Frame = +2 Query: 215 EEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRK-GYTPKRASVPHVKDVDSITLEDALV 391 E P+ LG + + E I + GPYG YVQLGE+ + PKR S+P + D++TL+ A+ Sbjct: 662 EGPEKLGVHPEAGEPIFMLIGPYGPYVQLGEESETNKKPKRVSLPKGLEKDAVTLDVAVS 721 Query: 392 LLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNE----ITLEKALELL 559 LL P LG+HP+ G V + + G + + K A ++ K + IT E+ALELL Sbjct: 722 LLSLPRLLGQHPETGAKVKAAIGRFGPYVVHESKEAKDYRSIKAPDDVLTITFERALELL 781 Query: 560 S 562 + Sbjct: 782 A 782 [205][TOP] >UniRef100_A3WD22 DNA topoisomerase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WD22_9SPHN Length = 858 Score = 73.6 bits (179), Expect = 1e-11 Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 7/192 (3%) Frame = +2 Query: 8 ADYLFGSLPD--KSRVCPSC-----TEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYS 166 +DYLF D +R CP C + G L + R GA FI C +P CK+ Sbjct: 571 SDYLFPPREDGKDARYCPLCDAEGRSGGRLALRGGRNGA--FIACANYPECKFTRSFGPP 628 Query: 167 SDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVP 346 +D DE + ++G + + I KSG +G YV++ D K KRAS+P Sbjct: 629 REDGDEA---------VQDGVMGQHPETGADIHRKSGRFGPYVEMEVDEK---KKRASIP 676 Query: 347 HVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPN 526 KDVD LE A+ LL+ P +G HP+ G + + + G +R+ K A + Sbjct: 677 --KDVDDFDLEWAIKLLELPRIIGAHPETGKEIEAAIGRYGPYLRHDGKYANLKTTQDVF 734 Query: 527 EITLEKALELLS 562 + + A+ LL+ Sbjct: 735 DTGMNAAVTLLA 746 [206][TOP] >UniRef100_A0YII1 DNA topoisomerase n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YII1_9CYAN Length = 893 Score = 73.6 bits (179), Expect = 1e-11 Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 6/122 (4%) Frame = +2 Query: 215 EEPKLLGFNSGSNEKILLKSGPYGIYVQLGED-RKGYTPKRASVPHVKDVDSITLEDALV 391 E P+ LG + + E IL+ GPYG YVQLGE+ + PKR S+P + DS+TL+ A+ Sbjct: 662 EGPEKLGLHPETGEAILMLIGPYGPYVQLGEESEENKKPKRVSLPKGVEKDSVTLDMAVG 721 Query: 392 LLQYPLTLGKHPKDGHPVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALEL 556 LL P LG HP+ G V + + G Y + + K ++ K + ITLE+ALE+ Sbjct: 722 LLSLPRLLGVHPETGAKVKAAIGRFGPYVVHDQGKEGKDYRSIKAPDDVLAITLERALEM 781 Query: 557 LS 562 L+ Sbjct: 782 LA 783 Score = 57.8 bits (138), Expect = 6e-07 Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 13/190 (6%) Frame = +2 Query: 32 PDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTT 211 P+K + P E L+ + +G +G + K +L + D Sbjct: 664 PEKLGLHPETGEAILML-IGPYGPYVQLGEESEENKKPKRVSLPKGVEKDSVTLDMAVGL 722 Query: 212 IEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALV 391 + P+LLG + + K+ G +G YV + ++G + P DV +ITLE AL Sbjct: 723 LSLPRLLGVHPETGAKVKAAIGRFGPYVVHDQGKEGKDYRSIKAPD--DVLAITLERALE 780 Query: 392 LLQYPLT-------------LGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEI 532 +L P LG HP+D PV + G +++ A +PK ++ Sbjct: 781 MLAQPKAGRGGRRSATPLRELGAHPEDSEPVNVYNGPYGLYVKHGKTNASIPKEVTVEDV 840 Query: 533 TLEKALELLS 562 TLEKALE L+ Sbjct: 841 TLEKALEWLA 850 [207][TOP] >UniRef100_D0D7V2 DNA topoisomerase I n=1 Tax=Citreicella sp. SE45 RepID=D0D7V2_9RHOB Length = 918 Score = 73.2 bits (178), Expect = 1e-11 Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 8/179 (4%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP C +G L K SR G F+GC +P C Y D +E Sbjct: 630 RICPKCGQGRLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGADGEE------------- 674 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVKDV-------DSITLE 379 +LLG + G +++ LK+G +G YVQ GE + P RAS+P D +TLE Sbjct: 675 RLLGSHEG--DEVWLKAGRFGPYVQRGEPTPENKKPPRASLPKKGGAFLPGWSPDDMTLE 732 Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556 A+ LL P +G HP+ G V + + G I ++ +P KP + L++ E+ Sbjct: 733 KAVTLLTLPRVVGMHPEGGE-VKSNLGRFGPFIMHQ-----LPDEEKPVYVNLKEFQEV 785 [208][TOP] >UniRef100_Q28MI5 DNA topoisomerase n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MI5_JANSC Length = 907 Score = 72.8 bits (177), Expect = 2e-11 Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 1/150 (0%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C G L + +R G G FIGC +P C+Y + D + E + + Sbjct: 630 RLCPNCGVGRLSMRTARAG-GAFIGCSAYPECRYTRP--FGPPDPEAE----ASAIPPDG 682 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 KLLG + G ++I + G +G YVQ G + P R S+P + + LE AL+LL Sbjct: 683 KLLGEDQG--DEIRIFKGRFGPYVQRGAMTEENKKPPRQSIPKDWTPEELDLERALMLLS 740 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490 P +G HP+DG V + + G +++ + Sbjct: 741 LPRQIGPHPEDGIMVWSNIGRYGPYLKHAE 770 [209][TOP] >UniRef100_B1WVJ8 DNA topoisomerase n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WVJ8_CYAA5 Length = 881 Score = 72.8 bits (177), Expect = 2e-11 Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 6/166 (3%) Frame = +2 Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262 K+ +FG + + I L SD + E+ E P+ LG + + E I Sbjct: 611 KIGKFGPYVEVLDGEEKITASIPADLTPSDLNPEQVNKLLKQKTEGPEKLGLHPETGEPI 670 Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439 + G YG YVQLGE + PKRAS+P V+ +TLE A+ LL P LG HP+ G Sbjct: 671 YVLIGSYGPYVQLGEATEENKKPKRASLPKGTSVEDVTLEMAVGLLALPRLLGTHPETGA 730 Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562 + + + G Y + + K ++ K + +TLE+ALELL+ Sbjct: 731 KIKASIGRFGPYVVHDQGKSGKDYRSLKKEDDVLTVTLERALELLA 776 [210][TOP] >UniRef100_A3VFW8 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VFW8_9RHOB Length = 846 Score = 72.8 bits (177), Expect = 2e-11 Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 1/132 (0%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP C G L K SR G F+GC +P C+Y ++ + D Sbjct: 597 RKCPLCGTGDLHLKTSRSGG--FVGCSNYPECRYTRPI--GGGEETQGD----------- 641 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 ++LG + + E+I L+SG +G YVQ GE + P RAS+P D + LE AL LL Sbjct: 642 RILGEDE-NGEEISLRSGRFGPYVQRGEVSEENKKPDRASLPKGWSADDMDLEKALTLLS 700 Query: 401 YPLTLGKHPKDG 436 P +G+HP+ G Sbjct: 701 LPRLIGQHPEGG 712 [211][TOP] >UniRef100_Q11AC4 DNA topoisomerase n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q11AC4_TRIEI Length = 874 Score = 72.4 bits (176), Expect = 2e-11 Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 9/148 (6%) Frame = +2 Query: 146 IAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT 325 I + L SD D E+ E P+ LG + ++ I + +G YG YVQLG+D +G Sbjct: 638 IPEDLTPSDLDPEQIEKLLKQKTEGPQELGIHPEEDKSIYIMTGRYGPYVQLGDDSEGSK 697 Query: 326 --PKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRY----- 484 PKRAS+P +++ +TL+ A+ LL P TLG HP+ G + + + G I + Sbjct: 698 RKPKRASLPKGVNMEDVTLDLAVGLLSLPRTLGTHPETGCKIQANLGRFGPYIVHDQGKE 757 Query: 485 --RDKIALVPKNTKPNEITLEKALELLS 562 +D +L K+ ITLE+ALELL+ Sbjct: 758 DGKDYRSLKVKDDVLT-ITLERALELLA 784 Score = 54.7 bits (130), Expect = 5e-06 Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 17/130 (13%) Frame = +2 Query: 221 PKLLGFNSGSNEKI---LLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALV 391 P+ LG + + KI L + GPY ++ Q ED K Y + DV +ITLE AL Sbjct: 726 PRTLGTHPETGCKIQANLGRFGPYIVHDQGKEDGKDYRSLKVK----DDVLTITLERALE 781 Query: 392 LLQYPLT--------------LGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNE 529 LL P LGKHP+DG V + + G +++ A +PK+ + Sbjct: 782 LLAQPKRSRRGSAKAVLPLKDLGKHPEDGETVGVYDGRYGLYVKHGKVNASLPKDMSVED 841 Query: 530 ITLEKALELL 559 +T EKALELL Sbjct: 842 VTWEKALELL 851 [212][TOP] >UniRef100_UPI0001BB471A DNA topoisomerase I n=1 Tax=alpha proteobacterium HIMB114 RepID=UPI0001BB471A Length = 851 Score = 72.0 bits (175), Expect = 3e-11 Identities = 50/165 (30%), Positives = 77/165 (46%) Frame = +2 Query: 68 GTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSG 247 G L KV RFGA FIGC +P CK+ Q + EPK +G + Sbjct: 612 GDLSLKVGRFGA--FIGCSNYPECKFTRPL--------SRIKAAQEDFMSEPKEIG-ETD 660 Query: 248 SNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHP 427 +KI+LK G +G Y+Q+G D K K S+P + + +E A L P LGK+P Sbjct: 661 EGKKIMLKKGRFGPYLQVGNDEKEM--KNFSIPKGISPNDVDIEKAKFLSGLPKVLGKYP 718 Query: 428 KDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 ++ + L + G ++ +K A + I + KA+ L++ Sbjct: 719 ENNEDITLNNGRFGPYVKCANKSATLESPEDIFSIGINKAITLIA 763 [213][TOP] >UniRef100_Q2GDH2 DNA topoisomerase n=1 Tax=Neorickettsia sennetsu str. Miyayama RepID=Q2GDH2_NEOSM Length = 827 Score = 72.0 bits (175), Expect = 3e-11 Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 2/172 (1%) Frame = +2 Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229 CP C +G + VSR+G F+GC +P C++I + YS+D+D E PK Sbjct: 601 CPKCEKGYMHLNVSRYGV--FLGCTDYPVCRFIVNS-YSTDNDTEY-----------PKQ 646 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALV--LLQY 403 + + I L GPYGIY++ KG K +S+P KDVD +++++ + Sbjct: 647 IA------QDISLHKGPYGIYLKC----KG---KNSSIP--KDVDPVSIDEEFAHKIASL 691 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 P LGKHP DG + + + G + + K + + ++ +E+TL++A++ + Sbjct: 692 PKILGKHPIDGKEIKMGLGPYGLYLFWNAKYYNL-QFSQMDEMTLDQAVQFM 742 [214][TOP] >UniRef100_Q11SL3 DNA topoisomerase n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11SL3_CYTH3 Length = 841 Score = 72.0 bits (175), Expect = 3e-11 Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 2/125 (1%) Frame = +2 Query: 206 TTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE--DRKGYTPKRASVPHVKDVDSITLE 379 +T+ ++LG + + E+I + G YG +VQ+GE + KG PK AS+ + +++ITLE Sbjct: 589 STVNTSRILGTHPETGEQISTRLGRYGPFVQIGEADEEKGIKPKYASLRKGQLIENITLE 648 Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 +AL L + P LG + P+++ + + G IR+ K +PK P I+ E+ +EL+ Sbjct: 649 EALELFKLPRELGAF--EDKPMVVAIGRFGPYIRHNSKFVSIPKIDDPMTISAERGIELI 706 Query: 560 SGNNV 574 V Sbjct: 707 LAKRV 711 [215][TOP] >UniRef100_A3W2J5 DNA topoisomerase n=1 Tax=Roseovarius sp. 217 RepID=A3W2J5_9RHOB Length = 906 Score = 72.0 bits (175), Expect = 3e-11 Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 7/180 (3%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP C G L K SR G F+GC +P C+Y D ++ D Sbjct: 619 RQCPLCGTGQLHLKTSRSGG--FVGCGNYPECRYTRPI--GGDAGEKGD----------- 663 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 ++LG + E I L+SG +G YVQ GE + P RAS+P +++TLE AL LL Sbjct: 664 RILGEDENGIE-ISLRSGRFGPYVQRGEATEENKKPDRASLPKGWSAEAMTLEKALTLLS 722 Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYR--DKIALVPKNTK-PN---EITLEKALELLS 562 P +G+HP +G + + G + ++ ++ V N K PN EI + +A+ELL+ Sbjct: 723 LPREVGQHP-EGGMISANFGRFGPYLMHQSPEEAKPVYANLKDPNDVFEIGMNRAVELLA 781 [216][TOP] >UniRef100_B0CFN9 DNA topoisomerase n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CFN9_ACAM1 Length = 892 Score = 70.9 bits (172), Expect = 7e-11 Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 6/166 (3%) Frame = +2 Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262 ++ RFG ++ P + K + +D E+ +E P+ LGF+ E I Sbjct: 611 RIGRFGPYIETEHEEKPVKASLPKDMTPADLTPEQIEQLLKQKLEGPEKLGFHPEKGEPI 670 Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439 + G YG YVQLG+ + PKRAS+P ++S+TL+ A+ LL P LG+HP G Sbjct: 671 YILLGAYGPYVQLGDVTEENKKPKRASLPKGVAMESVTLDMAVELLSLPRLLGQHPDTGC 730 Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562 V + + + G Y + + K ++ K + I+ E+ALELL+ Sbjct: 731 KVQVGLGRFGPYVVHDQGKEGKDYRSLKKEDNLFTISFERALELLA 776 [217][TOP] >UniRef100_A3PBF8 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. MIT 9301 RepID=A3PBF8_PROM0 Length = 868 Score = 70.9 bits (172), Expect = 7e-11 Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 5/130 (3%) Frame = +2 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364 D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P D Sbjct: 648 DIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNNDQNKAKPRRASLPKELKTD 707 Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNE----I 532 +TL++ALVLL P LG HP+ G + G Y +++ ++ K + + Sbjct: 708 DLTLDEALVLLSLPRLLGVHPEGGVVEADRGRFGPYIKWIKNENESENRSLKKEDDVFTV 767 Query: 533 TLEKALELLS 562 +E+ALE+L+ Sbjct: 768 DIERALEILA 777 [218][TOP] >UniRef100_B6B9B7 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B9B7_9RHOB Length = 875 Score = 70.9 bits (172), Expect = 7e-11 Identities = 58/179 (32%), Positives = 85/179 (47%), Gaps = 8/179 (4%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R CP C +G L K SR G F+GC +P C Y + E Sbjct: 613 RTCPKCGQGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEGYE------------- 657 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHV-KDV------DSITLE 379 ++LG + G ++I LKSG +G YVQ GE + P R+S+P KD + ITLE Sbjct: 658 RVLGEDDG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQGKDFLPGWGPNEITLE 715 Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556 AL LL P +G+HP DG + + + G I ++ +P KP + L++ L++ Sbjct: 716 QALTLLTLPRDIGQHP-DGGIIQSNLGRFGPYIAHQ-----LPDEEKPVYVNLKETLDV 768 [219][TOP] >UniRef100_Q2JJ84 DNA topoisomerase n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JJ84_SYNJB Length = 933 Score = 70.5 bits (171), Expect = 9e-11 Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 2/118 (1%) Frame = +2 Query: 215 EEPKLLGFNSGSNEKI-LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDAL 388 E PK + F+ + E I ++ GPYG YVQLGE PKR S+P D +T E AL Sbjct: 661 EGPKPIAFHPETQEPIYVIPQGPYGPYVQLGEVSEDNKKPKRTSLPKGLKPDQVTPEIAL 720 Query: 389 VLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 LL P TLG+HP+ G V + + G + +P + I+LE+ALELL+ Sbjct: 721 GLLSLPRTLGEHPESGKKVQAGIGRFGPYVVCDGDFRSLPADEDVLTISLERALELLA 778 Score = 53.9 bits (128), Expect = 9e-06 Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 12/126 (9%) Frame = +2 Query: 221 PKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 P+ LG + S +K+ G +G YV D + S+P +DV +I+LE AL LL Sbjct: 726 PRTLGEHPESGKKVQAGIGRFGPYVVCDGDFR-------SLPADEDVLTISLERALELLA 778 Query: 401 YPLT------------LGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEK 544 P LG HP+DG PV L G +++ A +PK +TLE Sbjct: 779 QPKKSRGRASAKPLRELGSHPEDGEPVNLHDGPYGLYVKHGKVNASLPKGIPAEAVTLEM 838 Query: 545 ALELLS 562 AL++L+ Sbjct: 839 ALQVLA 844 [220][TOP] >UniRef100_B7KFB6 DNA topoisomerase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KFB6_CYAP7 Length = 872 Score = 70.1 bits (170), Expect = 1e-10 Identities = 60/186 (32%), Positives = 90/186 (48%), Gaps = 9/186 (4%) Frame = +2 Query: 32 PDKSRVCP-SCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNT 208 P ++R P E T+ K+ R+G + + I L +D D ++ Sbjct: 595 PGEARAVPLENLEATV--KIGRYGPYIEVQNGEEVVTASIPADLTPADLDPQQVELLLKQ 652 Query: 209 TIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLE 379 E P+ +G + + E I + G YG YVQLGE D K PKRAS+P + +TLE Sbjct: 653 KTEGPEKVGLHPETGEPIYMLIGSYGPYVQLGEVTEDNK--KPKRASLPKGTKPEDVTLE 710 Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEK 544 A+ LL P TLG HP G + + + + G Y + + K ++ K + ITLE+ Sbjct: 711 MAVDLLSLPRTLGNHPATGAKIQVNLGRFGPYVVHDQGKEGKDYRSLKAEDNLFTITLER 770 Query: 545 ALELLS 562 ALELL+ Sbjct: 771 ALELLA 776 [221][TOP] >UniRef100_A8G3F0 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. MIT 9215 RepID=A8G3F0_PROM2 Length = 868 Score = 70.1 bits (170), Expect = 1e-10 Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 8/133 (6%) Frame = +2 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364 D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P D Sbjct: 648 DIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNSDQDKAKPRRASLPKELKTD 707 Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKG--GYSIRY-----RDKIALVPKNTKP 523 +TL DAL+LL P LG HP+ G +++ +G G I++ + + K Sbjct: 708 DLTLHDALILLSLPRLLGVHPEGG---VIEADRGRFGPYIKWIKNENESENRSLKKGDDV 764 Query: 524 NEITLEKALELLS 562 ++ L++ALE+L+ Sbjct: 765 FKVDLKRALEILA 777 [222][TOP] >UniRef100_Q0FCC1 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FCC1_9RHOB Length = 866 Score = 70.1 bits (170), Expect = 1e-10 Identities = 51/150 (34%), Positives = 72/150 (48%), Gaps = 3/150 (2%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP+C G L + +R G G FIGC +P C+Y + +D P E Sbjct: 593 RLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRY-TRAFGPPGAEDSSGIPP------EG 644 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394 K LG + G ++I G +G YVQ GE D K P R S+P + LE AL L Sbjct: 645 KNLGEDEG--DQIYAFKGRFGPYVQRGEVSDDNK--KPPRQSIPKDWPPADVDLEKALRL 700 Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRY 484 L P +G HP+DG V + + G +++ Sbjct: 701 LSLPRQIGPHPEDGIMVWSNIGRYGPYLKH 730 [223][TOP] >UniRef100_B9P0I6 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. MIT 9202 RepID=B9P0I6_PROMA Length = 868 Score = 70.1 bits (170), Expect = 1e-10 Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 8/133 (6%) Frame = +2 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364 D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P D Sbjct: 648 DIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNSDQDKAKPRRASLPKELKTD 707 Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKG--GYSIRY-----RDKIALVPKNTKP 523 +TL DAL+LL P LG HP+ G +++ +G G I++ + + K Sbjct: 708 DLTLHDALILLSLPRLLGVHPEGG---VIEADRGRFGPYIKWIKNENESENRSLKKGDDV 764 Query: 524 NEITLEKALELLS 562 ++ L++ALE+L+ Sbjct: 765 FKVDLKRALEILA 777 [224][TOP] >UniRef100_A7ADP3 DNA topoisomerase n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7ADP3_9PORP Length = 781 Score = 70.1 bits (170), Expect = 1e-10 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 4/119 (3%) Frame = +2 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLG----EDRKGYTPKRASVPHVKDVDSITLEDALVLL 397 LG + S + +K G YG VQ+G +D++ P+ AS+ + +D+ITLE+AL L Sbjct: 592 LGIDPKSGNPVFVKIGRYGPVVQIGAAHADDKEAPKPQFASLMKGQSIDTITLEEALKLF 651 Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLSGNNV 574 P T+G++ +G ++ V + G IR+ K +PK+ P IT E+A+ L+ G V Sbjct: 652 DLPRTVGEY--EGKVMVAAVGRFGPFIRHDGKFVSIPKDLNPLTITAEEAIALIEGKRV 708 [225][TOP] >UniRef100_A6C5M1 DNA topoisomerase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C5M1_9PLAN Length = 909 Score = 70.1 bits (170), Expect = 1e-10 Identities = 54/177 (30%), Positives = 77/177 (43%), Gaps = 2/177 (1%) Frame = +2 Query: 35 DKSRVCPSCTEG-TLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTT 211 D +C EG T +V R+G ++ P I + +D +E Sbjct: 601 DAREICTLDLEGITSAVRVGRYGPYVSNEAEEEPVSASIPDNIAPADLTNELAEKLIRLK 660 Query: 212 IEEPKLLGFNSGSNEKILLKSGPYGIYVQLGED-RKGYTPKRASVPHVKDVDSITLEDAL 388 E PK LG + N I GP+G Y+QLG+ G PKR S+P D D+I E AL Sbjct: 661 AEGPKSLGMHPEENTPIYKLHGPFGPYLQLGDVVEDGPKPKRVSIPKNVDPDTIDFETAL 720 Query: 389 VLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 L P LG+HP+ G V + + G + + + K I L +A+ELL Sbjct: 721 KYLSLPRALGEHPETGKKVNAGIGRFGPYVLHDKVYKSLGKEDDILTIDLPRAVELL 777 [226][TOP] >UniRef100_Q31C99 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. MIT 9312 RepID=Q31C99_PROM9 Length = 868 Score = 69.7 bits (169), Expect = 2e-10 Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 5/130 (3%) Frame = +2 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364 D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P D Sbjct: 648 DKKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNNDQDKAKPRRASLPKELKTD 707 Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNE----I 532 +TL++ALVLL P LG HP+ G + G Y +++ ++ K + + Sbjct: 708 DLTLDEALVLLSLPRLLGVHPEGGIVEADRGRFGPYIKWIKNENESENRSLKKEDDVFTV 767 Query: 533 TLEKALELLS 562 L++ALE+L+ Sbjct: 768 DLKRALEILA 777 [227][TOP] >UniRef100_Q2JWS9 DNA topoisomerase n=1 Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JWS9_SYNJA Length = 886 Score = 69.7 bits (169), Expect = 2e-10 Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 2/118 (1%) Frame = +2 Query: 215 EEPKLLGFNSGSNEKI-LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDAL 388 E PK + F+ + E + ++ GPYG YVQLGE + PKR S+P + +T E AL Sbjct: 659 EGPKPIAFHPETQEPVYVIPQGPYGPYVQLGEVSEENKKPKRTSLPRGLKPEQVTPEIAL 718 Query: 389 VLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 LL P TLG+HP+ G V + + G + +P + I+LE+ALELL+ Sbjct: 719 GLLSLPRTLGEHPESGKKVQAGIGRFGPYVVCDGDFRSLPADEDVLTISLERALELLA 776 Score = 60.8 bits (146), Expect = 7e-08 Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 12/126 (9%) Frame = +2 Query: 221 PKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400 P+ LG + S +K+ G +G YV D + S+P +DV +I+LE AL LL Sbjct: 724 PRTLGEHPESGKKVQAGIGRFGPYVVCDGDFR-------SLPADEDVLTISLERALELLA 776 Query: 401 YPLT------------LGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEK 544 P LG HP+DG PV L G +++ A +PK+ P +TLE Sbjct: 777 QPKKGRGRGSAKPLRELGSHPEDGEPVTLHDGPYGLYVKHGKVNASLPKDLSPEAVTLEM 836 Query: 545 ALELLS 562 ALELL+ Sbjct: 837 ALELLA 842 [228][TOP] >UniRef100_A2BPR8 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. AS9601 RepID=A2BPR8_PROMS Length = 868 Score = 69.7 bits (169), Expect = 2e-10 Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%) Frame = +2 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364 D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P D Sbjct: 648 DIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNNDQDKAKPRRASLPKELKTD 707 Query: 365 SITLEDALVLLQYPLTLGKHPKDG 436 +TL++ALVLL P LG HP+ G Sbjct: 708 DLTLDEALVLLSLPRLLGAHPEGG 731 [229][TOP] >UniRef100_Q1PJN8 DNA topoisomerase n=1 Tax=uncultured Prochlorococcus marinus clone HOT0M-10D2 RepID=Q1PJN8_PROMA Length = 726 Score = 69.3 bits (168), Expect = 2e-10 Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%) Frame = +2 Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364 D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P D Sbjct: 506 DIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNNDQDKAKPRRASLPKELKTD 565 Query: 365 SITLEDALVLLQYPLTLGKHPKDG 436 +TL++ALVLL P LG HP+ G Sbjct: 566 DLTLDEALVLLSLPRLLGVHPEGG 589 [230][TOP] >UniRef100_P34185 DNA topoisomerase 1 n=2 Tax=Synechococcus elongatus RepID=TOP1_SYNE7 Length = 883 Score = 69.3 bits (168), Expect = 2e-10 Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 10/170 (5%) Frame = +2 Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262 ++ RFGA D P + K L +D D + E P LG + ++E I Sbjct: 611 RIGRFGAYLEAEADGEPIKANLPKELTPADLDVQRVETLLRQKTEGPDQLGTHPETDEPI 670 Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439 L +G YG YVQLG + PKRAS+P +++I+LE A+ LL P TLG+HP+ G Sbjct: 671 YLLTGAYGPYVQLGAATEEKPKPKRASLPKGMSLETISLEQAVGLLSLPRTLGEHPETGR 730 Query: 440 PVILKVAK---------GGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562 + + + GG YR + + I L++ALELL+ Sbjct: 731 RIQAGLGRFGPYVVCDLGGGEKDYRS----LKADDDVLTIDLDRALELLA 776 [231][TOP] >UniRef100_B7JYQ6 DNA topoisomerase n=1 Tax=Cyanothece sp. PCC 8801 RepID=B7JYQ6_CYAP8 Length = 877 Score = 68.9 bits (167), Expect = 3e-10 Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 6/166 (3%) Frame = +2 Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262 K+ +FG + + I L +D + E+ IE P LG + + E I Sbjct: 611 KIGKFGPYIEVNQGEEVVTASIPADLTPADLNPEQIATILKQKIEGPDKLGLHPETGEGI 670 Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439 + +G YG YVQLGE + PKRAS+P + +TLE A+ LL P LG HP+ G Sbjct: 671 FILTGTYGPYVQLGEVSDENPKPKRASLPKGVKPEDVTLEIAVGLLSLPRLLGTHPETGA 730 Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562 + + + G Y + + K ++ K + ++LE+ALELL+ Sbjct: 731 KIKASLGRFGPYVVHDQGKDGKDYRSLKAEDDILTVSLERALELLA 776 [232][TOP] >UniRef100_C7QKW5 DNA topoisomerase I n=1 Tax=Cyanothece sp. PCC 8802 RepID=C7QKW5_CYAP0 Length = 877 Score = 68.9 bits (167), Expect = 3e-10 Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 6/166 (3%) Frame = +2 Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262 K+ +FG + + I L +D + E+ IE P LG + + E I Sbjct: 611 KIGKFGPYIEVNQGEEVVTASIPADLTPADLNPEQIATILKQKIEGPDKLGLHPETGEGI 670 Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439 + +G YG YVQLGE + PKRAS+P + +TLE A+ LL P LG HP+ G Sbjct: 671 FILTGTYGPYVQLGEVSDENPKPKRASLPKGVKPEDVTLEIAVGLLSLPRLLGTHPETGA 730 Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562 + + + G Y + + K ++ K + ++LE+ALELL+ Sbjct: 731 KIKASLGRFGPYVVHDQGKDGKDYRSLKAEDDILTVSLERALELLA 776 [233][TOP] >UniRef100_A9G971 DNA topoisomerase n=1 Tax=Phaeobacter gallaeciensis BS107 RepID=A9G971_9RHOB Length = 900 Score = 68.9 bits (167), Expect = 3e-10 Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 8/179 (4%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 RVCP C G L K SR G F+GC +P C Y + E Sbjct: 613 RVCPKCGAGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEGYE------------- 657 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHV-KDV------DSITLE 379 ++LG + G ++I LKSG +G YVQ GE + P R+S+P KD + +TLE Sbjct: 658 RILGEDDG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQGKDFLPGWGPNEVTLE 715 Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556 A+ LL P +G+HP +G + + + G I ++ P KP + L++ L++ Sbjct: 716 QAVTLLTLPREIGQHP-EGGAIQANLGRFGPYIAHQK-----PDEEKPVYVNLKETLDV 768 [234][TOP] >UniRef100_A9EWC2 DNA topoisomerase n=1 Tax=Phaeobacter gallaeciensis 2.10 RepID=A9EWC2_9RHOB Length = 890 Score = 68.9 bits (167), Expect = 3e-10 Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 8/179 (4%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 RVCP C G L K SR G F+GC +P C Y + E Sbjct: 613 RVCPKCGAGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEGYE------------- 657 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHV-KDV------DSITLE 379 ++LG + G ++I LKSG +G YVQ GE + P R+S+P KD + +TLE Sbjct: 658 RILGEDDG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQGKDFLPGWGPNEVTLE 715 Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556 A+ LL P +G+HP +G + + + G I ++ P KP + L++ L++ Sbjct: 716 QAVTLLTLPREIGQHP-EGGAIQANLGRFGPYIAHQK-----PDEEKPVYVNLKETLDV 768 [235][TOP] >UniRef100_B3TB56 Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG8K5 RepID=B3TB56_9ZZZZ Length = 843 Score = 68.6 bits (166), Expect = 3e-10 Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 1/114 (0%) Frame = +2 Query: 221 PKLLGFNSGSNEKILLKSGPYGIYVQLGEDRK-GYTPKRASVPHVKDVDSITLEDALVLL 397 P LG+ + E + L+ GPYG+Y+Q+GE + P R S+P ++I LE AL +L Sbjct: 729 PVRLGYTP-NREALTLRKGPYGLYLQVGEKSETNKKPTRISIPKNMKPETIDLEVALAML 787 Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 P LG HP PV++KV K G+ I+ DK + +TL A+E L Sbjct: 788 SLPRELGMHPDLEEPVMVKVGKYGFYIQCNDKNIPLKNMDMALNMTLSDAVEAL 841 [236][TOP] >UniRef100_C9CZJ8 DNA topoisomerase I n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CZJ8_9RHOB Length = 884 Score = 68.6 bits (166), Expect = 3e-10 Identities = 58/179 (32%), Positives = 83/179 (46%), Gaps = 8/179 (4%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP C G L K SR G F+GC +P C Y + E Sbjct: 613 RLCPKCGAGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEGYE------------- 657 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHV-KDV------DSITLE 379 ++LG + G ++I LKSG +G YVQ GE + P R+S+P KD + ITLE Sbjct: 658 RILGEDEG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQGKDYLPGWGPNDITLE 715 Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556 A+ LL P +G HP DG V + + G I ++ P KP + L++ L++ Sbjct: 716 QAVTLLTLPREIGAHP-DGGVVSSNLGRFGPYIMHQR-----PDEEKPVYVNLKETLDV 768 [237][TOP] >UniRef100_UPI0001B4AF42 DNA topoisomerase I n=1 Tax=Bacteroides sp. 2_1_33B RepID=UPI0001B4AF42 Length = 782 Score = 67.8 bits (164), Expect = 6e-10 Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 4/114 (3%) Frame = +2 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLG----EDRKGYTPKRASVPHVKDVDSITLEDALVLL 397 LG + S + + +K G YG VQ+G ED++ P+ A++ + +++ITLE+AL L Sbjct: 592 LGIDPKSGKPVFVKIGRYGPVVQIGQAHPEDKEAPKPQFATLMKGQSIETITLEEALKLF 651 Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 P T+G++ +G ++ V + G IR+ K +PK P IT E+A+EL+ Sbjct: 652 DLPRTIGEY--EGKVMVAAVGRFGPFIRHDGKFVSIPKGLNPLSITAEEAIELI 703 [238][TOP] >UniRef100_Q1GE45 DNA topoisomerase n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GE45_SILST Length = 893 Score = 67.8 bits (164), Expect = 6e-10 Identities = 57/179 (31%), Positives = 80/179 (44%), Gaps = 8/179 (4%) Frame = +2 Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223 R+CP C G L K SR G F+GC +P C Y + E Sbjct: 613 RICPKCGAGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEGYE------------- 657 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHV-KDV------DSITLE 379 ++LG + G ++I LKSG +G YVQ GE + P R+S+P KD + ITLE Sbjct: 658 RVLGEDDG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQGKDYLPGWGPNEITLE 715 Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556 A+ LL P +G HP+ G G Y + R P KP + L++ L++ Sbjct: 716 QAVTLLTLPREIGAHPEGGVVSSNLGRFGPYIMHQR------PDEEKPVYVNLKETLDV 768 [239][TOP] >UniRef100_A6LHY3 DNA topoisomerase n=1 Tax=Parabacteroides distasonis ATCC 8503 RepID=A6LHY3_PARD8 Length = 782 Score = 67.8 bits (164), Expect = 6e-10 Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 4/114 (3%) Frame = +2 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLG----EDRKGYTPKRASVPHVKDVDSITLEDALVLL 397 LG + S + + +K G YG VQ+G ED++ P+ A++ + +++ITLE+AL L Sbjct: 592 LGIDPKSGKPVFVKIGRYGPVVQIGQAHPEDKEAPKPQFATLMKGQSIETITLEEALKLF 651 Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 P T+G++ +G ++ V + G IR+ K +PK P IT E+A+EL+ Sbjct: 652 DLPRTIGEY--EGKVMVAAVGRFGPFIRHDGKFVSIPKGLNPLSITAEEAIELI 703 [240][TOP] >UniRef100_C7X5S2 DNA topoisomerase I n=1 Tax=Parabacteroides sp. D13 RepID=C7X5S2_9PORP Length = 782 Score = 67.8 bits (164), Expect = 6e-10 Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 4/114 (3%) Frame = +2 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLG----EDRKGYTPKRASVPHVKDVDSITLEDALVLL 397 LG + S + + +K G YG VQ+G ED++ P+ A++ + +++ITLE+AL L Sbjct: 592 LGIDPKSGKPVFVKIGRYGPVVQIGQAHPEDKEAPKPQFATLMKGQSIETITLEEALKLF 651 Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 P T+G++ +G ++ V + G IR+ K +PK P IT E+A+EL+ Sbjct: 652 DLPRTIGEY--EGKVMVAAVGRFGPFIRHDGKFVSIPKGLNPLSITAEEAIELI 703 [241][TOP] >UniRef100_A3ILD7 DNA topoisomerase n=1 Tax=Cyanothece sp. CCY0110 RepID=A3ILD7_9CHRO Length = 881 Score = 67.8 bits (164), Expect = 6e-10 Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 6/166 (3%) Frame = +2 Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262 K+ +FG I + I L SD + E+ E P+ LG + + E I Sbjct: 611 KIGKFGPYVEIEQGEEKITASIPADLTPSDLNPEQVNKLLKQKTEGPEKLGLHPETGEPI 670 Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439 + G YG YVQLGE + PKRAS+P ++ +TL+ A+ LL P LG HP Sbjct: 671 YILIGSYGPYVQLGEVSEENKKPKRASLPKGTKIEDVTLDMAVGLLALPRLLGTHPDTEA 730 Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562 + + + G Y + + K ++ K + +TLE+ALELL+ Sbjct: 731 KIKASLGRFGPYVVHDQGKNGKDYRSLKKEDDVLTVTLERALELLA 776 [242][TOP] >UniRef100_UPI00019694E2 hypothetical protein BACCELL_02476 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI00019694E2 Length = 795 Score = 67.4 bits (163), Expect = 7e-10 Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 1/139 (0%) Frame = +2 Query: 146 IAKTLYSSDDDDEEDT-PQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGY 322 I KT Y + E T +N ++LG + S + + +K G +G VQ+G Sbjct: 576 IMKTFYKTFHPSVESTLAAKNAHKTGERILGDDPVSGKPVSVKIGRFGPVVQIGSAEDEE 635 Query: 323 TPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIAL 502 P+ + + + +++ITLE+A+ L + P TLG+H +G V + + G I Y Sbjct: 636 KPRFSPLKKGQSIETITLEEAMELFKLPRTLGEH--EGKTVTVNAGRFGPYIYYSGTYTS 693 Query: 503 VPKNTKPNEITLEKALELL 559 +PK P EI LE+ALEL+ Sbjct: 694 LPKGVDPMEIELEEALELI 712 [243][TOP] >UniRef100_B3ETD4 DNA topoisomerase n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETD4_AMOA5 Length = 780 Score = 67.4 bits (163), Expect = 7e-10 Identities = 33/120 (27%), Positives = 70/120 (58%) Frame = +2 Query: 200 QNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLE 379 + T I ++LG + S + + + G +G VQ+G + + P+ AS+ + ++SITLE Sbjct: 588 ERTAINTSRMLGHDPVSGKPVTARIGRFGPLVQIGNNEEDEAPRFASLKKDQRIESITLE 647 Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 +AL L ++P T+G+ + P+ + + G ++Y+++ +PK P +T E+A++++ Sbjct: 648 EALTLFKFPRTVGQW--ENLPIEASIGRFGPYLKYQNQFYTLPKEEDPLTVTEERAIQII 705 [244][TOP] >UniRef100_B7BGA5 Putative uncharacterized protein (Fragment) n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BGA5_9PORP Length = 391 Score = 67.4 bits (163), Expect = 7e-10 Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 4/116 (3%) Frame = +2 Query: 230 LGFNSGSNEKILLKSGPYGIYVQLG----EDRKGYTPKRASVPHVKDVDSITLEDALVLL 397 LG + S + +K G YG VQ+G +D++ P+ AS+ +D+ITLE+AL L Sbjct: 203 LGIDPKSGNPVFVKIGRYGPVVQIGVAHADDKEAPKPQFASLMKGLSIDTITLEEALKLF 262 Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLSG 565 P T+G++ +G ++ V + G IR+ K +PK+ P IT E+A+ L+ G Sbjct: 263 DLPRTVGEY--EGKVMVAAVGRFGPFIRHDGKFVSIPKDLNPLTITAEEAIALIDG 316 [245][TOP] >UniRef100_B3C7S7 DNA topoisomerase n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C7S7_9BACE Length = 795 Score = 67.4 bits (163), Expect = 7e-10 Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 1/139 (0%) Frame = +2 Query: 146 IAKTLYSSDDDDEEDT-PQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGY 322 I KT Y + E T +N +LLG + S + + +K G +G VQ+G Sbjct: 576 IMKTFYKTFHPSVESTLAAKNAHKTGERLLGDDPVSGKPVSVKIGRFGPVVQIGSAEDEE 635 Query: 323 TPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIAL 502 P+ + + +++ITLE+A+ L + P TLG+H +G V + + G I Y Sbjct: 636 KPRFSPLKKGMSIETITLEEAMELFKLPRTLGEH--EGKTVSVNAGRFGPYIYYNGTYTS 693 Query: 503 VPKNTKPNEITLEKALELL 559 +PK P EI LE+ALEL+ Sbjct: 694 LPKGADPMEIELEEALELI 712 [246][TOP] >UniRef100_P73810 DNA topoisomerase 1 n=1 Tax=Synechocystis sp. PCC 6803 RepID=TOP1_SYNY3 Length = 898 Score = 67.4 bits (163), Expect = 7e-10 Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 6/166 (3%) Frame = +2 Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262 K+ +FG I + I + L +D + E+ E P +G + + E I Sbjct: 611 KIGKFGPYIEIPQGEEIITASIPQDLTPADLNPEQVAVLLKQKTEGPDKVGIHPETGEPI 670 Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439 + G YG YVQLGE + PKR S+P + +TLE A+ LL P LG+HP+ G Sbjct: 671 FILIGAYGPYVQLGEATEENKKPKRTSLPKGVKPEDVTLEMAVGLLALPRNLGEHPESGK 730 Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562 + + + G Y + + K ++ K ++ ITLE+ALELL+ Sbjct: 731 NIKASLGRFGPYVVHDQGKDGKDYRSLKGDDDVLTITLERALELLA 776 [247][TOP] >UniRef100_A6L010 DNA topoisomerase n=1 Tax=Bacteroides vulgatus ATCC 8482 RepID=A6L010_BACV8 Length = 812 Score = 66.6 bits (161), Expect = 1e-09 Identities = 38/112 (33%), Positives = 64/112 (57%) Frame = +2 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 ++LG + S + + +K G +G +Q+G P+ A + +++ITLE+AL + Sbjct: 593 RVLGTDPVSGKPVSVKIGRFGPVIQIGTADDEEKPRFAQLAKGLSMETITLEEALDAFKL 652 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 P TLG + DGH V + V + G +RY +PK T P EI+L++A+EL+ Sbjct: 653 PRTLGDY--DGHTVTVGVGRFGPYVRYDKLFVSIPKGTDPMEISLDEAVELI 702 [248][TOP] >UniRef100_C6YZ92 DNA topoisomerase n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6YZ92_9BACE Length = 812 Score = 66.6 bits (161), Expect = 1e-09 Identities = 38/112 (33%), Positives = 64/112 (57%) Frame = +2 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 ++LG + S + + +K G +G +Q+G P+ A + +++ITLE+AL + Sbjct: 593 RVLGTDPVSGKPVSVKIGRFGPVIQIGTADDEEKPRFAQLTKGLSMETITLEEALDAFKL 652 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 P TLG + DGH V + V + G +RY +PK T P EI+L++A+EL+ Sbjct: 653 PRTLGDY--DGHTVTVGVGRFGPYVRYDKLFVSIPKGTDPMEISLDEAVELI 702 [249][TOP] >UniRef100_C3RCM9 DNA topoisomerase n=1 Tax=Bacteroides sp. D4 RepID=C3RCM9_9BACE Length = 812 Score = 66.6 bits (161), Expect = 1e-09 Identities = 38/112 (33%), Positives = 64/112 (57%) Frame = +2 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 ++LG + S + + +K G +G +Q+G P+ A + +++ITLE+AL + Sbjct: 593 RVLGTDPVSGKPVSVKIGRFGPVIQIGTADDEEKPRFAQLAKGLSMETITLEEALDAFKL 652 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 P TLG + DGH V + V + G +RY +PK T P EI+L++A+EL+ Sbjct: 653 PRTLGDY--DGHTVTVGVGRFGPYVRYDKLFVSIPKGTDPMEISLDEAVELI 702 [250][TOP] >UniRef100_C3Q3Q1 DNA topoisomerase n=1 Tax=Bacteroides sp. 9_1_42FAA RepID=C3Q3Q1_9BACE Length = 812 Score = 66.6 bits (161), Expect = 1e-09 Identities = 38/112 (33%), Positives = 64/112 (57%) Frame = +2 Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403 ++LG + S + + +K G +G +Q+G P+ A + +++ITLE+AL + Sbjct: 593 RVLGTDPVSGKPVSVKIGRFGPVIQIGTADDEEKPRFAQLAKGLSMETITLEEALDAFKL 652 Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559 P TLG + DGH V + V + G +RY +PK T P EI+L++A+EL+ Sbjct: 653 PRTLGDY--DGHTVTVGVGRFGPYVRYDKLFVSIPKGTDPMEISLDEAVELI 702