[UP]
[1][TOP]
>UniRef100_B9N6D9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N6D9_POPTR
Length = 254
Score = 283 bits (724), Expect = 7e-75
Identities = 135/187 (72%), Positives = 162/187 (86%)
Frame = +2
Query: 14 YLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDT 193
+LFGSLPDKSR CPSC EGTLIFKVSRFGAGYFIGCDQHP CKYIAKTLY DD++E+T
Sbjct: 52 FLFGSLPDKSRTCPSCMEGTLIFKVSRFGAGYFIGCDQHPNCKYIAKTLYG--DDEKEET 109
Query: 194 PQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSIT 373
PQ +++++EPKLLG + SNEK+LLK+GPYG YVQLGEDRKGY PKR+SV H+KDV +IT
Sbjct: 110 PQ-SSSVDEPKLLGVHPTSNEKVLLKNGPYGYYVQLGEDRKGYAPKRSSVSHIKDVGAIT 168
Query: 374 LEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALE 553
E AL LL+YPLTLG HPKDG+PV++K+ KGGY++++R +A VPKN KP +IT+EKALE
Sbjct: 169 HEVALNLLRYPLTLGDHPKDGYPVMIKLGKGGYTVKHRRTMASVPKNLKPEKITMEKALE 228
Query: 554 LLSGNNV 574
LLSG NV
Sbjct: 229 LLSGKNV 235
[2][TOP]
>UniRef100_UPI0001983099 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001983099
Length = 1183
Score = 278 bits (711), Expect = 2e-73
Identities = 137/191 (71%), Positives = 156/191 (81%)
Frame = +2
Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
KF D+LF LPDKSR CPSC EGTLIFKVSRFG+GYFIGCDQHP+CKYIAK L D DD
Sbjct: 980 KFGDFLFSFLPDKSRTCPSCMEGTLIFKVSRFGSGYFIGCDQHPKCKYIAKML---DGDD 1036
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361
+E+ Q+ T EEPK LG + GS+EKILLK+GPYG Y+QLGEDRKGY PKRASV H DV
Sbjct: 1037 DEEVASQDKTFEEPKALGLSPGSSEKILLKNGPYGFYLQLGEDRKGYLPKRASVSH--DV 1094
Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541
SITLEDAL LL+YP+TLG HP D HPV+LK+AK G+SIR+R IA VPKN KPN+ITLE
Sbjct: 1095 GSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHRRTIAPVPKNIKPNDITLE 1154
Query: 542 KALELLSGNNV 574
KAL+LL G +V
Sbjct: 1155 KALKLLLGKDV 1165
[3][TOP]
>UniRef100_UPI000034F143 DNA topoisomerase family protein n=1 Tax=Arabidopsis thaliana
RepID=UPI000034F143
Length = 1280
Score = 260 bits (664), Expect = 6e-68
Identities = 123/191 (64%), Positives = 153/191 (80%)
Frame = +2
Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
K+ D LF LP SR CPSC EGTL FK S+FGAGYFIGCDQHP CK+IAKTLY D+D
Sbjct: 1069 KYEDVLFSLLPYPSRTCPSCMEGTLSFKASKFGAGYFIGCDQHPSCKFIAKTLYGEDED- 1127
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361
ED P +N +EEPKLLG + ++EK++LK GPYG YVQLGED+KG+TPKRA+ H DV
Sbjct: 1128 -EDDPPKNNCVEEPKLLGLHPNTSEKVILKCGPYGHYVQLGEDKKGHTPKRANAAH--DV 1184
Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541
+SITLE AL LL+YPLTLG HP+DG PV+LK++K G++I++R +A VPKNT+P E+TLE
Sbjct: 1185 NSITLESALELLRYPLTLGTHPEDGQPVVLKLSKSGFTIKHRRNMATVPKNTEPGEVTLE 1244
Query: 542 KALELLSGNNV 574
+A++LLSG NV
Sbjct: 1245 RAMKLLSGKNV 1255
[4][TOP]
>UniRef100_A7P530 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P530_VITVI
Length = 188
Score = 258 bits (658), Expect = 3e-67
Identities = 123/170 (72%), Positives = 140/170 (82%)
Frame = +2
Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
KF D+LF LPDKSR CPSC EGTLIFKVSRFG+GYFIGCDQHP+CKYIAK L D DD
Sbjct: 5 KFGDFLFSFLPDKSRTCPSCMEGTLIFKVSRFGSGYFIGCDQHPKCKYIAKML---DGDD 61
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361
+E+ Q+ T EEPK LG + GS+EKILLK+GPYG Y+QLGEDRKGY PKRASV H+KDV
Sbjct: 62 DEEVASQDKTFEEPKALGLSPGSSEKILLKNGPYGFYLQLGEDRKGYLPKRASVSHIKDV 121
Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPK 511
SITLEDAL LL+YP+TLG HP D HPV+LK+AK G+SIR+R IA VPK
Sbjct: 122 GSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHRRTIAPVPK 171
[5][TOP]
>UniRef100_B8B0L5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8B0L5_ORYSI
Length = 301
Score = 234 bits (596), Expect = 5e-60
Identities = 113/191 (59%), Positives = 143/191 (74%)
Frame = +2
Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
KF LF L + SR+CPSC+EGTL FKVSR+G GYFIGCD+HP+CKYIA+TL SDDDD
Sbjct: 93 KFGSILFSDLDNDSRICPSCSEGTLRFKVSRYGEGYFIGCDRHPKCKYIARTL--SDDDD 150
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361
E + + P+LLG S+EK+ LK GPYG YVQ+GEDRKG +PKRA + VKD+
Sbjct: 151 ETEASDETQRTFTPRLLGALPDSDEKVFLKQGPYGHYVQVGEDRKGVSPKRAPLSEVKDI 210
Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541
DSITL+DA+ LLQYP LGKHP D PV++ +K G+SIR+R +A +PK+ P +ITLE
Sbjct: 211 DSITLKDAIELLQYPKILGKHPDDDLPVLITHSKAGFSIRHRRTLASLPKSADPKKITLE 270
Query: 542 KALELLSGNNV 574
+AL+LL+G NV
Sbjct: 271 RALKLLTGKNV 281
[6][TOP]
>UniRef100_A3BAP2 DNA topoisomerase n=1 Tax=Oryza sativa Japonica Group
RepID=A3BAP2_ORYSJ
Length = 1180
Score = 234 bits (596), Expect = 5e-60
Identities = 113/191 (59%), Positives = 143/191 (74%)
Frame = +2
Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
KF LF L + SR+CPSC+EGTL FKVSR+G GYFIGCD+HP+CKYIA+TL SDDDD
Sbjct: 972 KFGSILFSDLDNDSRICPSCSEGTLRFKVSRYGEGYFIGCDRHPKCKYIARTL--SDDDD 1029
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361
E + + P+LLG S+EK+ LK GPYG YVQ+GEDRKG +PKRA + VKD+
Sbjct: 1030 ETEASDETQRTFTPRLLGALPDSDEKVFLKQGPYGHYVQVGEDRKGVSPKRAPLSEVKDI 1089
Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541
DSITL+DA+ LLQYP LGKHP D PV++ +K G+SIR+R +A +PK+ P +ITLE
Sbjct: 1090 DSITLKDAIELLQYPKILGKHPDDDLPVLITHSKAGFSIRHRRTLASLPKSADPKKITLE 1149
Query: 542 KALELLSGNNV 574
+AL+LL+G NV
Sbjct: 1150 RALKLLTGKNV 1160
[7][TOP]
>UniRef100_B9SPT5 DNA topoisomerase n=1 Tax=Ricinus communis RepID=B9SPT5_RICCO
Length = 1071
Score = 232 bits (591), Expect = 2e-59
Identities = 118/190 (62%), Positives = 145/190 (76%)
Frame = +2
Query: 5 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 184
F D+LFGSLPD SR CPSC EGTLIFK Y + +Y DD++
Sbjct: 886 FGDFLFGSLPDDSRTCPSCLEGTLIFK-------YMLD-------------IYG--DDED 923
Query: 185 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 364
E+TPQ N+ +EEPKLLG + S EK+LLK+GPYG Y+QLGEDRKGYTPKRASV H+KDVD
Sbjct: 924 EETPQNNS-VEEPKLLGVHPVSTEKVLLKNGPYGFYLQLGEDRKGYTPKRASVSHIKDVD 982
Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEK 544
+ITLEDAL LL+YP+TLG HPKDGHP+ILK+AK G+++R+R IA VPKN KP+ ++LEK
Sbjct: 983 NITLEDALELLRYPVTLGNHPKDGHPIILKLAKVGFAVRHRRTIASVPKNMKPDNVSLEK 1042
Query: 545 ALELLSGNNV 574
ALELLSG++V
Sbjct: 1043 ALELLSGDDV 1052
[8][TOP]
>UniRef100_C5Z4V5 DNA topoisomerase (Fragment) n=1 Tax=Sorghum bicolor
RepID=C5Z4V5_SORBI
Length = 1094
Score = 228 bits (582), Expect = 2e-58
Identities = 109/189 (57%), Positives = 145/189 (76%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
KF LF + SR+CPSC+EGTL FKVSR+G GYFIGCD+HP+CKYIA++L +D+
Sbjct: 910 KFGPILFPDVDKDSRICPSCSEGTLRFKVSRYGEGYFIGCDRHPKCKYIARSLSQQEDET 969
Query: 182 E--EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
E E++P+ T P+LLG S++K+ LK GPYG YVQ+GED+KG PKRAS+ VK
Sbjct: 970 EPTEESPKSFT----PRLLGVMPDSDQKVFLKQGPYGYYVQIGEDKKGLFPKRASLSEVK 1025
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
D+DS+TLEDA+ LLQYP LGKHP+D HPV++ +K GY+I++R +ALVPK+T P ++T
Sbjct: 1026 DIDSVTLEDAIELLQYPKILGKHPEDDHPVLITHSKVGYNIKHRRSLALVPKSTDPKKMT 1085
Query: 536 LEKALELLS 562
LE+AL+LLS
Sbjct: 1086 LERALKLLS 1094
[9][TOP]
>UniRef100_C3SA84 DNA topoisomerase n=1 Tax=Brachypodium distachyon RepID=C3SA84_BRADI
Length = 856
Score = 228 bits (582), Expect = 2e-58
Identities = 112/187 (59%), Positives = 141/187 (75%)
Frame = +2
Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
KF LF L D SR+CPSC+EGTL FKVSRFG GYFIGCD+HP+CKYIA+TL SD+DD
Sbjct: 663 KFRPILFPDLDDASRICPSCSEGTLRFKVSRFGEGYFIGCDRHPKCKYIARTL--SDEDD 720
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361
E + ++ EP+LLG NEK+ LK GPYG Y+Q+GEDRKG + KRAS+ VK+V
Sbjct: 721 ENEACEETKWNFEPRLLGVMPNLNEKVFLKQGPYGYYIQVGEDRKGISQKRASLSEVKNV 780
Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541
DSITLEDA+ LLQYP LGKHP D +PV++ +K G+S+R+R +A +PKNT +ITLE
Sbjct: 781 DSITLEDAIELLQYPKILGKHPDDEYPVLMTHSKAGFSVRHRRTVAPLPKNTDLKKITLE 840
Query: 542 KALELLS 562
AL+LL+
Sbjct: 841 CALKLLA 847
[10][TOP]
>UniRef100_C7J3V1 Os06g0281400 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group
RepID=C7J3V1_ORYSJ
Length = 197
Score = 214 bits (545), Expect = 4e-54
Identities = 104/173 (60%), Positives = 132/173 (76%)
Frame = +2
Query: 56 SCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLG 235
SC+EGTL FKVSR+G GYFIGCD+HP+CKYIA+TL SDDDDE + + P+LLG
Sbjct: 7 SCSEGTLRFKVSRYGEGYFIGCDRHPKCKYIARTL--SDDDDETEASDETQRTFTPRLLG 64
Query: 236 FNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTL 415
S+EK+ LK GPYG YVQ+GEDRKG +PKRA + VKD+DSITL+DA+ LLQYP L
Sbjct: 65 ALPDSDEKVFLKQGPYGHYVQVGEDRKGVSPKRAPLSEVKDIDSITLKDAIELLQYPKIL 124
Query: 416 GKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLSGNNV 574
GKHP D PV++ +K G+SIR+R +A +PK+ P +ITLE+AL+LL+G NV
Sbjct: 125 GKHPDDDLPVLITHSKAGFSIRHRRTLASLPKSADPKKITLERALKLLTGKNV 177
[11][TOP]
>UniRef100_B9EZZ0 DNA topoisomerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9EZZ0_ORYSJ
Length = 962
Score = 214 bits (544), Expect = 5e-54
Identities = 107/191 (56%), Positives = 136/191 (71%)
Frame = +2
Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
KF LF L + SR+CPSC+EGTL KVS+ G GYFIGCD+HP+CKYIA+TL D+
Sbjct: 755 KFGSILFPDLDNDSRICPSCSEGTLRLKVSKHGEGYFIGCDRHPKCKYIARTLSVEVDET 814
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361
E Q+T P+LLG S+EK+ LK GPYG Y+Q+GED KG + KRA + VKD+
Sbjct: 815 EASDEIQSTFT--PRLLGVLPDSDEKVFLKQGPYGHYIQVGEDIKGVSRKRAPLSEVKDI 872
Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541
DSITLEDA+ LLQYP LGKHP D PV++ +K G+ IR+R +A +PK+ P EITLE
Sbjct: 873 DSITLEDAIELLQYPKILGKHPDDDLPVLVTHSKSGFRIRHRRTLAPLPKSADPKEITLE 932
Query: 542 KALELLSGNNV 574
+AL+LL+G NV
Sbjct: 933 RALKLLTGKNV 943
[12][TOP]
>UniRef100_B8AHL0 DNA topoisomerase n=1 Tax=Oryza sativa Indica Group
RepID=B8AHL0_ORYSI
Length = 968
Score = 214 bits (544), Expect = 5e-54
Identities = 107/191 (56%), Positives = 136/191 (71%)
Frame = +2
Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
KF LF L + SR+CPSC+EGTL KVS+ G GYFIGCD+HP+CKYIA+TL D+
Sbjct: 761 KFGSILFPDLDNDSRICPSCSEGTLRLKVSKHGEGYFIGCDRHPKCKYIARTLSVEVDET 820
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361
E Q+T P+LLG S+EK+ LK GPYG Y+Q+GED KG + KRA + VKD+
Sbjct: 821 EASDEIQSTFT--PRLLGVLPDSDEKVFLKQGPYGHYIQVGEDIKGVSRKRAPLSEVKDI 878
Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541
DSITLEDA+ LLQYP LGKHP D PV++ +K G+ IR+R +A +PK+ P EITLE
Sbjct: 879 DSITLEDAIELLQYPKILGKHPDDDLPVLVTHSKSGFRIRHRRTLAPLPKSADPKEITLE 938
Query: 542 KALELLSGNNV 574
+AL+LL+G NV
Sbjct: 939 RALKLLTGKNV 949
[13][TOP]
>UniRef100_A5B2R3 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5B2R3_VITVI
Length = 672
Score = 200 bits (508), Expect = 7e-50
Identities = 99/145 (68%), Positives = 118/145 (81%)
Frame = +2
Query: 140 KYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG 319
+YIAK L D DD+E+ Q+ T EEPK+LG + GS+EKILLK+GPYG Y+QLGEDRKG
Sbjct: 50 RYIAKML---DGDDDEEVASQDKTFEEPKVLGLSPGSSEKILLKNGPYGFYLQLGEDRKG 106
Query: 320 YTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIA 499
Y PKRASV H+KDV SITLEDAL LL+YP+TLG HP D HPV+LK+AK G+SIR+R IA
Sbjct: 107 YLPKRASVSHIKDVGSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHRRTIA 166
Query: 500 LVPKNTKPNEITLEKALELLSGNNV 574
VPKN KPN+ITLEKAL+LL G +V
Sbjct: 167 PVPKNIKPNDITLEKALKLLLGKDV 191
[14][TOP]
>UniRef100_O49571 DNA topoisomerase like-protein n=1 Tax=Arabidopsis thaliana
RepID=O49571_ARATH
Length = 1179
Score = 196 bits (498), Expect = 1e-48
Identities = 91/145 (62%), Positives = 120/145 (82%)
Frame = +2
Query: 140 KYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG 319
K+IAKTLY D+D ED P +N +EEPKLLG + ++EK++LK GPYG YVQLGED+KG
Sbjct: 1012 KFIAKTLYGEDED--EDDPPKNNCVEEPKLLGLHPNTSEKVILKCGPYGHYVQLGEDKKG 1069
Query: 320 YTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIA 499
+TPKRA+ H+KDV+SITLE AL LL+YPLTLG HP+DG PV+LK++K G++I++R +A
Sbjct: 1070 HTPKRANAAHIKDVNSITLESALELLRYPLTLGTHPEDGQPVVLKLSKSGFTIKHRRNMA 1129
Query: 500 LVPKNTKPNEITLEKALELLSGNNV 574
VPKNT+P E+TLE+A++LLSG NV
Sbjct: 1130 TVPKNTEPGEVTLERAMKLLSGKNV 1154
[15][TOP]
>UniRef100_B7F873 cDNA clone:J033143C09, full insert sequence n=1 Tax=Oryza sativa
Japonica Group RepID=B7F873_ORYSJ
Length = 286
Score = 188 bits (478), Expect = 2e-46
Identities = 94/170 (55%), Positives = 119/170 (70%)
Frame = +2
Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
KF LF L + SR+CPSC+EGTL KVS+ G GYFIGCD+HP+CKYIA+TL D+
Sbjct: 69 KFGSILFPDLDNDSRICPSCSEGTLRLKVSKHGEGYFIGCDRHPKCKYIARTLSVEVDET 128
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361
E Q+T P+LLG S+EK+ LK GPYG Y+Q+GED KG + KRA + VKD+
Sbjct: 129 EASDEIQSTFT--PRLLGVLPDSDEKVFLKQGPYGHYIQVGEDIKGVSRKRAPLSEVKDI 186
Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPK 511
DSITLEDA+ LLQYP LGKHP D PV++ +K G+ IR+R +A +PK
Sbjct: 187 DSITLEDAIELLQYPKILGKHPDDDLPVLVTHSKSGFRIRHRRTLAPLPK 236
[16][TOP]
>UniRef100_Q2GG85 DNA topoisomerase n=1 Tax=Ehrlichia chaffeensis str. Arkansas
RepID=Q2GG85_EHRCR
Length = 820
Score = 119 bits (298), Expect = 2e-25
Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 1/188 (0%)
Frame = +2
Query: 11 DYLFGS-LPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187
+Y+F S + SRVCP C +GTL +S+ G F+GC ++P CKY K + S DD +
Sbjct: 587 NYIFSSDKSESSRVCPVCNDGTLELNISK--NGIFLGCSKYPECKY-TKNVGSGIVDDTD 643
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367
+T + PK+LG ++ + ++I LK GPYG+Y+Q+G D+ G KRA++P D +
Sbjct: 644 NT-------QYPKILGIDAATGQEIYLKKGPYGLYLQIGNDKSG---KRAAIPKNIDANL 693
Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547
+ L+ A +L P++LG HP G + L + K G I Y K V +I++E A
Sbjct: 694 LDLQMAEKILSLPISLGTHPDTGQEIKLGLGKFGAYILYGGKYFSVKNEHNFLDISIENA 753
Query: 548 LELLSGNN 571
+ +++ N+
Sbjct: 754 INIIANNS 761
[17][TOP]
>UniRef100_Q2GG88 Topoisomerase DNA-binding C4 zinc finger domain protein n=2
Tax=Ehrlichia chaffeensis RepID=Q2GG88_EHRCR
Length = 260
Score = 119 bits (298), Expect = 2e-25
Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 1/188 (0%)
Frame = +2
Query: 11 DYLFGS-LPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187
+Y+F S + SRVCP C +GTL +S+ G F+GC ++P CKY K + S DD +
Sbjct: 47 NYIFSSDKSESSRVCPVCNDGTLELNISK--NGIFLGCSKYPECKY-TKNVGSGIVDDTD 103
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367
+T + PK+LG ++ + ++I LK GPYG+Y+Q+G D+ G KRA++P D +
Sbjct: 104 NT-------QYPKILGIDAATGQEIYLKKGPYGLYLQIGNDKSG---KRAAIPKNIDANL 153
Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547
+ L+ A +L P++LG HP G + L + K G I Y K V +I++E A
Sbjct: 154 LDLQMAEKILSLPISLGTHPDTGQEIKLGLGKFGAYILYGGKYFSVKNEHNFLDISIENA 213
Query: 548 LELLSGNN 571
+ +++ N+
Sbjct: 214 INIIANNS 221
[18][TOP]
>UniRef100_Q40K50 DNA topoisomerase n=1 Tax=Ehrlichia chaffeensis str. Sapulpa
RepID=Q40K50_EHRCH
Length = 820
Score = 119 bits (298), Expect = 2e-25
Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 1/188 (0%)
Frame = +2
Query: 11 DYLFGS-LPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187
+Y+F S + SRVCP C +GTL +S+ G F+GC ++P CKY K + S DD +
Sbjct: 587 NYIFSSDKSESSRVCPVCNDGTLELNISK--NGIFLGCSKYPECKY-TKNVGSGIVDDTD 643
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367
+T + PK+LG ++ + ++I LK GPYG+Y+Q+G D+ G KRA++P D +
Sbjct: 644 NT-------QYPKILGIDAATGQEIYLKKGPYGLYLQIGNDKSG---KRAAIPKNIDANL 693
Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547
+ L+ A +L P++LG HP G + L + K G I Y K V +I++E A
Sbjct: 694 LDLQMAEKILSLPISLGTHPDTGQEIKLGLGKFGAYILYGGKYFSVKNEHNFLDISIENA 753
Query: 548 LELLSGNN 571
+ +++ N+
Sbjct: 754 INIIANNS 761
[19][TOP]
>UniRef100_Q68X45 DNA topoisomerase 1 n=1 Tax=Rickettsia typhi RepID=TOP1_RICTY
Length = 779
Score = 117 bits (293), Expect = 6e-25
Identities = 75/190 (39%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
Frame = +2
Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178
K DY LFG + S+VCPSC G L K+ +FGA F+ C +P C + K S +D
Sbjct: 584 KALDYHLFGENKE-SKVCPSCKTGQLSLKLGKFGA--FLACSNYPECTF--KKSIVSGND 638
Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358
+ ED +T + + K+LG + E I LK+GPYG Y+QLGE PKR VP
Sbjct: 639 NNEDEGNLSTILNDNKILGTDKDGVE-IYLKTGPYGPYIQLGEQCGKVKPKRTPVPTNLK 697
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
ITLE AL LL PL +G H G +I+ +K G I+Y K VPK + L
Sbjct: 698 QSEITLEVALKLLSLPLKIGIHKDSGEEIIIGYSKFGPYIKYMCKFISVPKKYDFLNLNL 757
Query: 539 EKALELLSGN 568
+ A++L+ N
Sbjct: 758 DDAIKLIENN 767
[20][TOP]
>UniRef100_Q9ZDK2 DNA topoisomerase 1 n=1 Tax=Rickettsia prowazekii RepID=TOP1_RICPR
Length = 776
Score = 117 bits (293), Expect = 6e-25
Identities = 73/190 (38%), Positives = 102/190 (53%), Gaps = 1/190 (0%)
Frame = +2
Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178
K DY LFG +S+VCPSC G L K+ +FGA F+ C +P C + + +D++
Sbjct: 584 KALDYHLFGE-DKESKVCPSCKTGQLSLKLGKFGA--FLACSNYPECTFKKSIVSGNDNN 640
Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358
++E P +T + + K+LG + E I LK GPYG Y+QLGE PKR VP
Sbjct: 641 EDEGDP--STILNDNKILGTDQDGVE-IYLKKGPYGPYIQLGEQCGKVKPKRTPVPANLK 697
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
ITLE AL LL PL +G H G +I+ +K G I+Y K VPK ++L
Sbjct: 698 QSEITLEIALKLLNLPLKIGIHKDSGEEIIIGYSKFGPYIKYMCKFISVPKKYDFLNLSL 757
Query: 539 EKALELLSGN 568
A++L+ N
Sbjct: 758 NDAMKLIQNN 767
[21][TOP]
>UniRef100_Q4UM42 DNA topoisomerase 1 n=1 Tax=Rickettsia felis RepID=TOP1_RICFE
Length = 776
Score = 116 bits (291), Expect = 1e-24
Identities = 72/189 (38%), Positives = 101/189 (53%)
Frame = +2
Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
K DY S +S+ CPSC G L K+ +FGA F+ C +P C + K++ S +D++
Sbjct: 584 KALDYHLFSENKESKACPSCKTGELSLKLGKFGA--FLACSNYPECTF-RKSIVSGNDNN 640
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361
E D T E K+LG + E I LK GPYG YVQLGE PKR+ VP +
Sbjct: 641 ENDGDLAATP-NENKVLGTDKDGIE-IYLKKGPYGPYVQLGEQEGKVKPKRSPVPASLNQ 698
Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541
+ ITLE AL LL PL +G H G +++ K G I+Y K +PK ++L+
Sbjct: 699 NDITLEMALKLLSLPLKIGIHKDSGEEIMIGYGKFGPYIKYMGKFISIPKKYDFLNLSLD 758
Query: 542 KALELLSGN 568
A++L+ N
Sbjct: 759 DAMKLIEDN 767
[22][TOP]
>UniRef100_A8GN12 DNA topoisomerase n=1 Tax=Rickettsia akari str. Hartford
RepID=A8GN12_RICAH
Length = 776
Score = 114 bits (286), Expect = 4e-24
Identities = 70/191 (36%), Positives = 105/191 (54%), Gaps = 1/191 (0%)
Frame = +2
Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178
K DY LFG + S+VCPSC G L K+ +FGA F+ C +P C + K++ S +D+
Sbjct: 584 KALDYHLFGENKE-SKVCPSCKTGELSLKLGKFGA--FLACSNYPECTF-RKSIVSGNDN 639
Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358
+E + + + K+LG + E I LK GPYG Y+Q GE PKR+ +P + +
Sbjct: 640 NENEA-ELSAIPNGNKILGTDKDGIE-IYLKKGPYGPYIQHGEQEGKVKPKRSPIPAILN 697
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
+ ITLE AL LL PL +G H G +++ K G I+Y K +PK ++L
Sbjct: 698 QNDITLEIALKLLSLPLKIGIHKDSGEEIMIGYGKFGPYIKYMSKFISIPKKYDFLNLSL 757
Query: 539 EKALELLSGNN 571
+ A++L+ NN
Sbjct: 758 DDAMKLIEDNN 768
[23][TOP]
>UniRef100_C5Z8K8 Putative uncharacterized protein Sb10g010330 n=1 Tax=Sorghum
bicolor RepID=C5Z8K8_SORBI
Length = 227
Score = 114 bits (285), Expect = 5e-24
Identities = 68/165 (41%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Frame = +2
Query: 92 RFGAGYFIGCDQHPRC--KYIAKTLYSSDDDDE--EDTPQQNTTIEEPKLLGFNSGSNEK 259
+FG F D+ R +YIA++ +D+ E E++P+ T P+LLG S++K
Sbjct: 70 KFGPILFPDVDKDSRICPRYIARSFSQQEDETEPTEESPKSFT----PRLLGVMPDSDQK 125
Query: 260 ILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439
+ LK GPYG YVQ GED+KG PKRAS L+ GKHP+D H
Sbjct: 126 VFLKQGPYGYYVQNGEDKKGLFPKRAS----------------------LSEGKHPEDDH 163
Query: 440 PVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLSGNNV 574
PV++ +K GY+I++R +A VPKN P ++TLE AL+LLSG +V
Sbjct: 164 PVLITHSKVGYNIKHRRSLAQVPKNMDPKKMTLEPALKLLSGKSV 208
[24][TOP]
>UniRef100_C4YUC4 DNA topoisomerase n=1 Tax=Rickettsia endosymbiont of Ixodes
scapularis RepID=C4YUC4_9RICK
Length = 770
Score = 112 bits (279), Expect = 3e-23
Identities = 71/190 (37%), Positives = 100/190 (52%), Gaps = 1/190 (0%)
Frame = +2
Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178
K DY LFG + S+VCPSC G L K+ +FGA F+ C +P C + + +D++
Sbjct: 584 KALDYHLFGENKE-SKVCPSCKTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640
Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358
+ E P + E K+LG N E I LK GPYG Y+QLGE PKR+ VP +
Sbjct: 641 ENEGEP--SAIPNENKVLGTNKDGVE-IYLKKGPYGPYIQLGEQEGKVKPKRSPVPANLN 697
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
+ ITL+ AL LL PL +G G +++ K G I+Y K VPK + L
Sbjct: 698 QNDITLDIALKLLSLPLKIGVPKDSGEEIMIGYGKFGPYIKYMGKFISVPKKYDFLNLRL 757
Query: 539 EKALELLSGN 568
+ A++L+ N
Sbjct: 758 DDAMKLIEDN 767
[25][TOP]
>UniRef100_A8EZB7 DNA topoisomerase n=1 Tax=Rickettsia canadensis str. McKiel
RepID=A8EZB7_RICCK
Length = 777
Score = 109 bits (273), Expect = 1e-22
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 1/190 (0%)
Frame = +2
Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178
K DY LFG +S+ CPSC G L K+ +FGA F+ C+ +P+C + K++ S +++
Sbjct: 584 KALDYHLFGE-NQESKACPSCKTGELSLKLGKFGA--FLACNNYPKCTF-RKSIVSGNNN 639
Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358
+E + T EE K+LG + E I LK GPYG Y+Q GE KR+ VP +
Sbjct: 640 NENEDKLSTTPNEENKVLGTDKDGIE-IYLKKGPYGPYIQRGEHEGTVKLKRSPVPASLN 698
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
ITL+ AL LL PL +G H +++ K G I+Y K +PK ++L
Sbjct: 699 QSDITLDIALKLLSLPLKIGTHKDTHEEIMIGYGKFGPYIKYIGKFISIPKKYDFLNLSL 758
Query: 539 EKALELLSGN 568
++A++L+ N
Sbjct: 759 DEAIQLIEDN 768
[26][TOP]
>UniRef100_C3PN41 DNA topoisomerase n=1 Tax=Rickettsia africae ESF-5 RepID=C3PN41_RICAE
Length = 776
Score = 109 bits (272), Expect = 2e-22
Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
Frame = +2
Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178
K DY LFG + S++CPSC G L K+ +FGA F+ C +P C + + +D++
Sbjct: 584 KALDYHLFGENKE-SKICPSCNTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640
Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358
+ E P T E K+LG + E I LK GPYG Y+QLG+ PKR+ VP +
Sbjct: 641 ENEGEPA--TMPNENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLN 697
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
+ ITL+ AL LL PL +G H +++ K G I+Y D+ V K ++L
Sbjct: 698 QNDITLDIALKLLSLPLKIGIHKDSDEEIMIGYGKFGPYIKYMDQFISVQKKYDFLNLSL 757
Query: 539 EKALELLSGN 568
+ A++L+ N
Sbjct: 758 DDAMKLIEEN 767
[27][TOP]
>UniRef100_A8GWP3 DNA topoisomerase n=1 Tax=Rickettsia bellii OSU 85-389
RepID=A8GWP3_RICB8
Length = 800
Score = 109 bits (272), Expect = 2e-22
Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 2/184 (1%)
Frame = +2
Query: 14 YLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDT 193
++FG D S+VCPSC G L K+ +FGA F+ C +P C + K++ S +D++E D
Sbjct: 589 HIFGENKD-SKVCPSCKTGELSLKLGKFGA--FLACSNYPECNF-RKSIVSGNDNNEADG 644
Query: 194 PQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE--DRKGYTPKRASVPHVKDVDS 367
++ + E K+LG + E I LK GPYG Y+Q GE D K PKR+ +P + +
Sbjct: 645 EAKDI-VNENKVLGKDKEGIE-IYLKKGPYGPYIQYGEQVDSK-IKPKRSPLPAGLNQND 701
Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547
ITL+ AL LL PL +G H + G V++ K G I+Y K +PK ++L+ A
Sbjct: 702 ITLDMALKLLSLPLKIGNHKESGEEVLVGYGKFGPYIKYMGKFISIPKKYDFLNLSLDDA 761
Query: 548 LELL 559
++L+
Sbjct: 762 MKLI 765
[28][TOP]
>UniRef100_Q1RIM1 DNA topoisomerase 1 n=1 Tax=Rickettsia bellii RML369-C
RepID=TOP1_RICBR
Length = 800
Score = 109 bits (272), Expect = 2e-22
Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 2/184 (1%)
Frame = +2
Query: 14 YLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDT 193
++FG D S+VCPSC G L K+ +FGA F+ C +P C + K++ S +D++E D
Sbjct: 589 HIFGENKD-SKVCPSCKTGELSLKLGKFGA--FLACSNYPECNF-RKSIVSGNDNNEADG 644
Query: 194 PQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE--DRKGYTPKRASVPHVKDVDS 367
++ + E K+LG + E I LK GPYG Y+Q GE D K PKR+ +P + +
Sbjct: 645 EAKDI-VNENKVLGKDKEGIE-IYLKKGPYGPYIQYGEQVDSK-IKPKRSPLPAGLNQND 701
Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547
ITL+ AL LL PL +G H + G V++ K G I+Y K +PK ++L+ A
Sbjct: 702 ITLDMALKLLSLPLKIGNHKESGEEVLVGYGKFGPYIKYMGKFISIPKKYDFLNLSLDDA 761
Query: 548 LELL 559
++L+
Sbjct: 762 MKLI 765
[29][TOP]
>UniRef100_Q3YSD8 DNA topoisomerase n=1 Tax=Ehrlichia canis str. Jake
RepID=Q3YSD8_EHRCJ
Length = 820
Score = 108 bits (271), Expect = 2e-22
Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 3/190 (1%)
Frame = +2
Query: 11 DYLFGSLPDKS---RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
+Y+F S DKS RVCP+C +GTL +S+ G F+GC +P CKY D D
Sbjct: 587 NYIFSS--DKSETGRVCPACNDGTLGLNISK--NGIFLGCSGYPECKYTKNV--GGDLVD 640
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361
+ D ++ PK+LG ++ + ++I LK GPYG+Y+Q+G D+ G KRA++P +
Sbjct: 641 DVDN------VQYPKVLGIDTATCQEIYLKKGPYGVYLQIGSDKNG---KRAAIPKNMNA 691
Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541
+ + L+ A +L P++LG HP+ + L + K G I Y K + + ++ LE
Sbjct: 692 NLLDLQMAEKILNLPISLGTHPETCKEIKLGLGKFGAYILYEGKYFSIKNESNFLDVKLE 751
Query: 542 KALELLSGNN 571
A+++++ ++
Sbjct: 752 DAIDIIANSS 761
[30][TOP]
>UniRef100_Q7PBH0 DNA topoisomerase n=1 Tax=Rickettsia sibirica 246 RepID=Q7PBH0_RICSI
Length = 776
Score = 107 bits (267), Expect = 7e-22
Identities = 67/190 (35%), Positives = 100/190 (52%), Gaps = 1/190 (0%)
Frame = +2
Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178
K DY LFG + S++CPSC G L K+ +FGA F+ C +P C + + +D++
Sbjct: 584 KALDYHLFGENKE-SKICPSCNTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640
Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358
+ E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP +
Sbjct: 641 ENEGEPAAMPN--ENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLN 697
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
+ ITL+ AL LL PL +G H +++ K G I+Y D+ V K ++L
Sbjct: 698 QNDITLDIALKLLSLPLKIGIHKDSDEEIMIGYGKFGPYIKYMDQFISVQKKYDFLNLSL 757
Query: 539 EKALELLSGN 568
+ A++L+ N
Sbjct: 758 DDAMKLIEEN 767
[31][TOP]
>UniRef100_B0BX36 DNA topoisomerase n=1 Tax=Rickettsia rickettsii str. Iowa
RepID=B0BX36_RICRO
Length = 776
Score = 106 bits (265), Expect = 1e-21
Identities = 68/190 (35%), Positives = 99/190 (52%), Gaps = 1/190 (0%)
Frame = +2
Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178
K DY LFG + S++CPSC G L K+ +FGA F+ C +P C + + +D++
Sbjct: 584 KALDYHLFGENKE-SKICPSCHTGKLSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640
Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358
+ E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP +
Sbjct: 641 ENEGEPAAMPN--ENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLN 697
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
+ ITL+ AL LL PL +G H +I+ K G I+Y K V K ++L
Sbjct: 698 QNDITLDIALKLLSLPLKIGIHKDSDEEIIIGYGKFGPYIKYMGKFISVQKKYDFLNLSL 757
Query: 539 EKALELLSGN 568
+ A++L+ N
Sbjct: 758 DDAMKLIEEN 767
[32][TOP]
>UniRef100_A8GRN0 DNA topoisomerase n=1 Tax=Rickettsia rickettsii str. 'Sheila Smith'
RepID=A8GRN0_RICRS
Length = 776
Score = 106 bits (265), Expect = 1e-21
Identities = 68/190 (35%), Positives = 99/190 (52%), Gaps = 1/190 (0%)
Frame = +2
Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178
K DY LFG + S++CPSC G L K+ +FGA F+ C +P C + + +D++
Sbjct: 584 KALDYHLFGENKE-SKICPSCHTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640
Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358
+ E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP +
Sbjct: 641 ENEGEPAAMPN--ENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLN 697
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
+ ITL+ AL LL PL +G H +I+ K G I+Y K V K ++L
Sbjct: 698 QNDITLDIALKLLSLPLKIGIHKDSDEEIIIGYGKFGPYIKYMGKFISVQKKYDFLNLSL 757
Query: 539 EKALELLSGN 568
+ A++L+ N
Sbjct: 758 DDAMKLIEEN 767
[33][TOP]
>UniRef100_C4K2S3 DNA topoisomerase n=1 Tax=Rickettsia peacockii str. Rustic
RepID=C4K2S3_RICPU
Length = 776
Score = 105 bits (262), Expect = 2e-21
Identities = 67/190 (35%), Positives = 99/190 (52%), Gaps = 1/190 (0%)
Frame = +2
Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178
K DY LFG + S++CPSC G L K+ +FGA F+ C +P C + + +D++
Sbjct: 584 KALDYHLFGENKE-SKICPSCHTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640
Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358
+ E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP +
Sbjct: 641 ENEGEPAAMPN--ENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLN 697
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
+ ITL+ AL LL PL +G H +++ K G I+Y K V K ++L
Sbjct: 698 QNDITLDIALKLLSLPLKIGIHKDSDEEIMIGYGKFGPYIKYMGKFISVQKKYDFLNLSL 757
Query: 539 EKALELLSGN 568
+ A++L+ N
Sbjct: 758 DDAMKLIEEN 767
[34][TOP]
>UniRef100_A8F198 DNA topoisomerase n=1 Tax=Rickettsia massiliae MTU5
RepID=A8F198_RICM5
Length = 776
Score = 105 bits (261), Expect = 3e-21
Identities = 68/190 (35%), Positives = 98/190 (51%), Gaps = 1/190 (0%)
Frame = +2
Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178
K DY LFG + S+VC SC G L K+ +FGA F+ C +P C + + +D++
Sbjct: 584 KALDYHLFGENKE-SKVCTSCNTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640
Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358
+ E P E K+LG + E I LK GPYG Y+QLGE PKR+ VP +
Sbjct: 641 ENEGEPAAMPN--ENKVLGTDKDGVE-IYLKKGPYGPYIQLGEQEGKVKPKRSPVPASLN 697
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
+ ITL+ AL LL PL +G H +++ K G I+Y K V K ++L
Sbjct: 698 QNDITLDIALKLLSLPLKIGIHKDSDEEIMVGYGKFGPYIKYMGKFIAVQKKYDFLNLSL 757
Query: 539 EKALELLSGN 568
+ A++L+ N
Sbjct: 758 DDAMKLIEEN 767
[35][TOP]
>UniRef100_Q92IH1 DNA topoisomerase 1 n=1 Tax=Rickettsia conorii RepID=TOP1_RICCN
Length = 776
Score = 104 bits (260), Expect = 4e-21
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 1/190 (0%)
Frame = +2
Query: 2 KFADY-LFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178
K DY LFG + S++CPSC G L K+ +FGA F+ C +P C + + +D++
Sbjct: 584 KALDYHLFGENKE-SKICPSCNTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNN 640
Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358
+ E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP +
Sbjct: 641 ENEGEPAAMPN--ENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLN 697
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
+ ITL+ AL LL PL +G H +++ K G I+Y + V K ++L
Sbjct: 698 QNDITLDIALKLLSLPLKIGIHKDSDEEIMIGYGKFGPYIKYMGQFISVQKKYDFLNLSL 757
Query: 539 EKALELLSGN 568
+ A++L+ N
Sbjct: 758 DDAMKLIEEN 767
[36][TOP]
>UniRef100_C6XL73 DNA topoisomerase n=1 Tax=Hirschia baltica ATCC 49814
RepID=C6XL73_HIRBI
Length = 865
Score = 102 bits (253), Expect = 3e-20
Identities = 60/176 (34%), Positives = 92/176 (52%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP C EG L K+ R GA FIGC +P CK+ +++D D ED +
Sbjct: 599 RLCPLCKEGQLSMKLGRNGA--FIGCSNYPECKHTRP--FTTDGSDAEDAVSP-----DG 649
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
KLLG + + + I L++G +G YVQLGE PKR S+P D +TL A+ L+
Sbjct: 650 KLLGQDPETGKDISLRTGRFGPYVQLGEGIGKEKPKRGSIPKGWKADELTLAQAIQLINL 709
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLSGNN 571
P +G HP+DG + + G ++++ A +P E+ L +A+ L++ N
Sbjct: 710 PREIGPHPEDGEMMYANFGRYGPYVQHQKTYANLPDPMDVFEVGLNRAVALIAEKN 765
[37][TOP]
>UniRef100_Q5HBJ0 DNA topoisomerase n=1 Tax=Ehrlichia ruminantium str. Welgevonden
RepID=Q5HBJ0_EHRRW
Length = 819
Score = 101 bits (251), Expect = 5e-20
Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 1/176 (0%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
++CP C GTL +S+ G F+GC Q+P CKY K + S D+ E + + P
Sbjct: 597 KMCPVCNVGTLSLNISKNGV--FLGCSQYPECKY-TKNIGDSTVDNTEVS-------QYP 646
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
++LG ++ S E I LK GPYGIY+Q+G + G KRA++P D++ + LE A +L
Sbjct: 647 RVLGSDAASGEDIYLKKGPYGIYLQIGSGKDG---KRATLPKDIDLNLLDLEMAKKILSL 703
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPK-NTKPNEITLEKALELLSGN 568
P++LG +P + L + K G I Y K + K +ITLE A+ ++ N
Sbjct: 704 PISLGMYPDTNSEIKLGLGKFGAYIFYEGKYFSIKKFEGNFLDITLENAIAIIQKN 759
[38][TOP]
>UniRef100_Q0AQ63 DNA topoisomerase n=1 Tax=Maricaulis maris MCS10 RepID=Q0AQ63_MARMM
Length = 867
Score = 101 bits (251), Expect = 5e-20
Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CPSC EGTL ++ +FGA F+GC HP C + + +DD + D ++ P
Sbjct: 597 RLCPSCKEGTLSLRLGKFGA--FLGCSNHPDCSFTRQMSPPGEDDAQGD----RVIVQHP 650
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQL---GEDRKGYTPKRASVPHVKDVDSITLEDALVL 394
+ + + + LK+G +G Y+Q+ GED+ PKR+S+P D ++T E A+ L
Sbjct: 651 E-------TGKDVELKNGRFGWYLQMQLDGEDK----PKRSSIPKGWDAATLTEEQAIKL 699
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
+ P T+G+HP DG P+ + + G + + A +P + EI L +A+ +++
Sbjct: 700 IDLPRTVGEHPDDGQPITANIGRYGPYVHHDKTYANIPSVEEVFEIGLNRAVSVIA 755
[39][TOP]
>UniRef100_C7JES1 DNA topoisomerase I n=8 Tax=Acetobacter pasteurianus
RepID=C7JES1_ACEP3
Length = 897
Score = 101 bits (251), Expect = 5e-20
Identities = 64/176 (36%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
RVCPSC G L K+ R+GA FIGC +P C+Y + +SD +E D +
Sbjct: 604 RVCPSCGTGRLGLKLGRYGA--FIGCSNYPECQYTRRL--TSDSAEEGDDAALKDGM--- 656
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
+LLG N + E I ++ GP+G+YVQ GE + K PKRAS+P + +SITL+ AL L
Sbjct: 657 RLLGQNPETGEDITVRQGPWGLYVQQGEPNPEDKKAKPKRASLPKNINGESITLDQALGL 716
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +G HP+ G P+ + + G ++ + K+ I L +A++ L+
Sbjct: 717 LSLPRLVGIHPETGEPIQAGLGRFGPFVKMGAVYGSLDKDDDVLTIGLNRAVDALA 772
[40][TOP]
>UniRef100_B4R961 DNA topoisomerase n=1 Tax=Phenylobacterium zucineum HLK1
RepID=B4R961_PHEZH
Length = 878
Score = 100 bits (250), Expect = 6e-20
Identities = 65/187 (34%), Positives = 100/187 (53%), Gaps = 2/187 (1%)
Frame = +2
Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
A LF + D S RVCP C G L K SR GA FIGC +P C++ + D +
Sbjct: 583 ASTLFPPMADGSDPRVCPRCGSGRLSLKPSRTGA--FIGCSNYPECRF-TRPFGPPDAEG 639
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 361
E + ++ LG + + E + LK+G +G YVQLGE K PKR+S+P V
Sbjct: 640 AEASGDRD--------LGTDPQTGETVWLKAGRFGPYVQLGEGEK---PKRSSLPKGWSV 688
Query: 362 DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541
+ LE AL LL+ P +G HP+DG P++ + + G +++ A +P + E+ L
Sbjct: 689 ADMDLEKALRLLRLPREIGPHPEDGKPILAGIGRYGPFVQHNGTYANLPSVDEVFEVGLN 748
Query: 542 KALELLS 562
+A++L++
Sbjct: 749 RAVDLIA 755
[41][TOP]
>UniRef100_A4WUZ1 DNA topoisomerase n=1 Tax=Rhodobacter sphaeroides ATCC 17025
RepID=A4WUZ1_RHOS5
Length = 880
Score = 100 bits (250), Expect = 6e-20
Identities = 66/188 (35%), Positives = 97/188 (51%), Gaps = 3/188 (1%)
Frame = +2
Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
A +L+ PD S R+CP+C G L K +R G G FIGC +P C+Y + D+D
Sbjct: 578 APHLYPPRPDGSDPRICPTCGSGRLHLKTAR-GGGAFIGCGNYPECRYTRPISVTGDED- 635
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT-PKRASVPHVKD 358
N + KLLG + + I L+SG +G YVQ GE P RAS+P
Sbjct: 636 -------NAISPDGKLLGHDE-DGQPITLRSGRFGPYVQRGEATAEVPKPPRASLPKGWA 687
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
DS+ LE A +LL P +G+HP+DG PV + + G +++ A +P I +
Sbjct: 688 PDSVDLERARMLLNLPRLVGQHPEDGQPVEAAIGRYGPYVKHGSTYANLPDVEDVFTIGM 747
Query: 539 EKALELLS 562
+A+E+L+
Sbjct: 748 NRAVEVLA 755
[42][TOP]
>UniRef100_Q5FHL9 DNA topoisomerase n=1 Tax=Ehrlichia ruminantium str. Gardel
RepID=Q5FHL9_EHRRG
Length = 819
Score = 100 bits (249), Expect = 8e-20
Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 1/176 (0%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
++CP C GTL +S+ G F+GC Q+P CKY K + S D+ E + + P
Sbjct: 597 KMCPVCNVGTLSLNISKNGV--FLGCSQYPECKY-TKNIGDSTVDNTEVS-------QYP 646
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
++LG ++ S E I LK GPYGIY+Q+G + G KRA++P D++ + LE A +L
Sbjct: 647 RVLGSDAASGEDIYLKKGPYGIYLQIGGGKDG---KRATLPKDIDLNLLDLEMAKKILSL 703
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPK-NTKPNEITLEKALELLSGN 568
P++LG +P + L + K G I Y K + K +ITLE A+ ++ N
Sbjct: 704 PISLGMYPDTNSEIKLGLGKFGAYIFYEGKYFSIKKFEGNFLDITLENAIAIIQKN 759
[43][TOP]
>UniRef100_Q017B0 DNA topoisomerase n=1 Tax=Ostreococcus tauri RepID=Q017B0_OSTTA
Length = 1006
Score = 100 bits (249), Expect = 8e-20
Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Frame = +2
Query: 41 SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYI-------AKTLYSSDDDDEEDTPQ 199
+R CPSC G L K S+ G FIGC ++P C + + +DD D +
Sbjct: 683 ARKCPSCKTGRLGLKPSKSGG--FIGCSRYPECGFTHPLHPIRGAIVSDTDDADFMASDA 740
Query: 200 QNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGED------------RKGYTPKRASV 343
+ + PK+LG + + +I L+ GPYG Y+QLGE +K P+R V
Sbjct: 741 SSDVLLYPKILGVDPETGSEISLRLGPYGPYLQLGEKAAPVVSEDGKKAKKPPAPRRVGV 800
Query: 344 PHV-KDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNT- 517
++ KDV +TLEDA+ L +YP +GKHP PV + + GY + A V K+
Sbjct: 801 ANIEKDVSELTLEDAVRLFEYPKEIGKHPMTESPVSINMGPFGYYVACDGINASVGKSVL 860
Query: 518 ----KPNEITLEKALELL 559
+ +TLE+A+ELL
Sbjct: 861 KRVGSLDNVTLEEAVELL 878
[44][TOP]
>UniRef100_A4RYV6 DNA topoisomerase (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RYV6_OSTLU
Length = 840
Score = 100 bits (248), Expect = 1e-19
Identities = 61/179 (34%), Positives = 90/179 (50%), Gaps = 20/179 (11%)
Frame = +2
Query: 2 KFADYLFGSLPD------KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYI----- 148
K +LFG D ++R CPSC G L K S+ AG FIGC ++P C +
Sbjct: 661 KLGQHLFGEATDSDDVVSEARRCPSCKIGRLGLKPSK--AGGFIGCSRYPECGFTHPLHP 718
Query: 149 --AKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGY 322
+ +DD D T + + PK+LG + + ++I L+ GPYG Y+QLG+ +K
Sbjct: 719 IRGAIVSDTDDPDFVATVEDPDAVMYPKVLGVDPATGKEISLRLGPYGPYLQLGDGKKAK 778
Query: 323 TPKRASVPH-------VKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSI 478
PK+ P KDV+ ITL +A+ + +YP LG HP PV L + G+ +
Sbjct: 779 KPKKPPAPRRVGVANIGKDVNKITLAEAIGMFEYPKVLGVHPVTQAPVSLNIGPFGWYV 837
[45][TOP]
>UniRef100_B8EMQ0 DNA topoisomerase n=1 Tax=Methylocella silvestris BL2
RepID=B8EMQ0_METSB
Length = 977
Score = 99.8 bits (247), Expect = 1e-19
Identities = 59/172 (34%), Positives = 91/172 (52%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CPSC EG L K+ +FGA FIGC +P CK+ +TL + D + +
Sbjct: 602 RGCPSCGEGKLSLKLGKFGA--FIGCSNYPECKF-TRTLAAPDGAEANGGERPGV----- 653
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG + S E+I L+ G +G+YVQ GE K PKR+S+P +TLE A+ LL
Sbjct: 654 KSLGVDPDSGEEITLRDGRFGVYVQQGEGEK---PKRSSLPPTIAPADLTLEQAIALLSL 710
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
P + +HP+ P++ + + G +++ A V K+ I +A++L+
Sbjct: 711 PREVARHPESKEPIVAGIGRYGPYVQHGKTYANVAKDEDIISIGANRAIDLI 762
[46][TOP]
>UniRef100_Q1H4T9 DNA topoisomerase n=1 Tax=Methylobacillus flagellatus KT
RepID=Q1H4T9_METFK
Length = 845
Score = 99.0 bits (245), Expect = 2e-19
Identities = 61/176 (34%), Positives = 88/176 (50%), Gaps = 2/176 (1%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229
CP C + L ++ RFG FIGC +P C YI P N EP +
Sbjct: 587 CPKCGK-PLQSRLGRFGK--FIGCSGYPECDYIRN-------------PNANANNNEPTV 630
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLG--EDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
+G S + ILL +GPYG Y+Q+G E PKR S+P V S+ +E AL L+
Sbjct: 631 IGQEPESGKDILLLNGPYGPYLQIGLPEADSKKKPKRVSIPKEIPVSSLDMETALKLIAL 690
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLSGNN 571
P LG+HP+ G V+ + + G + + K +PK+ +I L +A+ELL+ N
Sbjct: 691 PRDLGQHPETGKKVVANIGRFGPYVNHDGKFKSIPKSESVFDIDLARAIELLAQAN 746
[47][TOP]
>UniRef100_A7IM95 DNA topoisomerase n=1 Tax=Xanthobacter autotrophicus Py2
RepID=A7IM95_XANP2
Length = 901
Score = 98.2 bits (243), Expect = 4e-19
Identities = 56/173 (32%), Positives = 91/173 (52%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C G L K+ +FGA FIGC +P C++ + D E D ++
Sbjct: 603 RLCPTCGNGRLSLKMGKFGA--FIGCSNYPECRHTRPL--TGDGAPEGDGKRE------- 651
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
LG + S E + +++G +G Y+QLGE + G PKR+S+P + LE AL LL
Sbjct: 652 --LGIDPESGEDVTIRAGRFGTYLQLGEGKDGEKPKRSSLPKGLAPADVDLETALKLLAL 709
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +GKHP+DG P++ + + G +++ A + I L +A+ L++
Sbjct: 710 PREVGKHPEDGEPILAGIGRYGPYVQHGRTYANIEDGDDILAIGLNRAVVLIA 762
[48][TOP]
>UniRef100_A8TLB9 DNA topoisomerase n=1 Tax=alpha proteobacterium BAL199
RepID=A8TLB9_9PROT
Length = 893
Score = 98.2 bits (243), Expect = 4e-19
Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 4/191 (2%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A + F + PD + R CPSC G L ++ +FGA FIGC +P C++ T +
Sbjct: 588 ELATHFFANGPDGAPDRGCPSCDGGRLSLRLGKFGA--FIGCSNYPNCRF---TRQLGEA 642
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG--YTPKRASVPH 349
+ + PK+LG + + +++ L+ GPYG+YVQLGE +G PKRAS+P
Sbjct: 643 AGGKSNGADGEEMNLPKVLGTDPETGQEVSLRKGPYGVYVQLGEPPEGSKEKPKRASLPR 702
Query: 350 VKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNE 529
+ L L LL P +G HP+ G + + + G ++Y +P +
Sbjct: 703 QLPPADVDLPKGLSLLSLPRPIGDHPETGTKIEAGIGRYGPYLKYDSVYVNLPPDDTVLT 762
Query: 530 ITLEKALELLS 562
I L A+EL++
Sbjct: 763 IGLNHAVELIA 773
[49][TOP]
>UniRef100_B1ZKT9 DNA topoisomerase n=1 Tax=Methylobacterium populi BJ001
RepID=B1ZKT9_METPB
Length = 909
Score = 97.8 bits (242), Expect = 5e-19
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 3/175 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C G L K+ +FGA FIGC +P CKY + L +S + E D
Sbjct: 602 RACPTCGSGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVEGEGDGSSAEGGQPGV 658
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + + + L+ G +G +VQLGE ++ PKR+S+P S+TLE AL L
Sbjct: 659 RVLGDDPATGLPVTLRDGRFGPFVQLGEASSEKGAEKPKRSSLPKGTSPGSVTLEIALRL 718
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
L P + KHP+ G P++ + + G +++ A + K+ EI +A++L+
Sbjct: 719 LSLPREVAKHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRAIDLI 773
[50][TOP]
>UniRef100_Q6G3F7 DNA topoisomerase n=1 Tax=Bartonella henselae RepID=Q6G3F7_BARHE
Length = 853
Score = 97.4 bits (241), Expect = 7e-19
Identities = 57/173 (32%), Positives = 93/173 (53%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP CT G L K+ R+GA F+GC +P CKY T D EE+ +N +EP
Sbjct: 604 RSCPLCTNGQLSLKLGRYGA--FVGCSNYPECKY---TRQLGTDPGEENEAIRN---DEP 655
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
+LG + + + + L++G +G Y+QLGE ++ KRA +P + ITLE AL L+
Sbjct: 656 VILGVDPKTGKDVTLRNGRFGPYIQLGESKEA---KRAGLPKEWQAEKITLEKALSLISL 712
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+ G + + + G + + K A + + +I + +A+ +L+
Sbjct: 713 PREIGIHPETGKTITATIGRYGPYLTHDGKYAPLLNVDEVFDIGINRAVTVLA 765
[51][TOP]
>UniRef100_Q2RPE8 DNA topoisomerase n=1 Tax=Rhodospirillum rubrum ATCC 11170
RepID=Q2RPE8_RHORT
Length = 915
Score = 97.4 bits (241), Expect = 7e-19
Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
RVCP C+ G L ++ +FGA F+GC +P CK+ + + + ++ T
Sbjct: 608 RVCPVCSAGRLGLRIGKFGA--FVGCSNYPDCKFTRPLVTKEGEGGDGAALAEDGT---- 661
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE------DRKGYTPKRASVPHVKDVDSITLEDA 385
K LG + S E + L+ GPYG+YVQ GE +K P R S+P D +I L+ A
Sbjct: 662 KPLGKDPVSGEDVTLRKGPYGLYVQKGEAAPVEKGKKAVKPPRVSIPKDMDAATIDLDIA 721
Query: 386 LVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L LL P +G HP+ G + + + G I++ D +PK+ I L +A+ LL+
Sbjct: 722 LKLLSLPRPVGDHPETGTMISAGIGRFGPYIKHGDIYKSLPKDDDVLTIGLNRAVSLLA 780
[52][TOP]
>UniRef100_B9KNS1 DNA topoisomerase n=2 Tax=Rhodobacter sphaeroides RepID=B9KNS1_RHOSK
Length = 884
Score = 97.4 bits (241), Expect = 7e-19
Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 3/188 (1%)
Frame = +2
Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
A +L+ PD S R+CP+C G L K +R G G FIGC +P C+Y + D++
Sbjct: 579 APHLYPPRPDGSDPRICPTCGSGRLHLKTAR-GGGAFIGCGNYPDCRYTRPISVTGDEE- 636
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKD 358
N + KLLG + I L+SG +G YVQ GE + P RAS+P
Sbjct: 637 -------NAISPDGKLLGHDE-DGAPISLRSGRFGPYVQKGEVTAEVPKPPRASLPKGWA 688
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
D++ L+ AL+LL P +G HP+DG PV + + G +++ A +P + I +
Sbjct: 689 PDTVDLDRALMLLNLPRLVGSHPEDGQPVEAAIGRYGPYVKHGSTYANLPDVEEVFTIGM 748
Query: 539 EKALELLS 562
+A+E+L+
Sbjct: 749 NRAVEVLA 756
[53][TOP]
>UniRef100_A3PHZ5 DNA topoisomerase n=1 Tax=Rhodobacter sphaeroides ATCC 17029
RepID=A3PHZ5_RHOS1
Length = 884
Score = 97.4 bits (241), Expect = 7e-19
Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 3/188 (1%)
Frame = +2
Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
A +L+ PD S R+CP+C G L K +R G G FIGC +P C+Y + D++
Sbjct: 579 APHLYPPRPDGSDPRICPTCGSGRLHLKTAR-GGGAFIGCGNYPDCRYTRPISVTGDEE- 636
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKD 358
N + KLLG + I L+SG +G YVQ GE + P RAS+P
Sbjct: 637 -------NAISPDGKLLGHDE-DGAPISLRSGRFGPYVQKGEVTAEVPKPPRASLPKGWA 688
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
D++ L+ AL+LL P +G HP+DG PV + + G +++ A +P + I +
Sbjct: 689 PDTVDLDRALMLLNLPRLVGSHPEDGQPVEAAIGRYGPYVKHGSTYANLPDVEEVFTIGM 748
Query: 539 EKALELLS 562
+A+E+L+
Sbjct: 749 NRAVEVLA 756
[54][TOP]
>UniRef100_C5SMZ1 DNA topoisomerase n=1 Tax=Asticcacaulis excentricus CB 48
RepID=C5SMZ1_9CAUL
Length = 873
Score = 97.4 bits (241), Expect = 7e-19
Identities = 63/183 (34%), Positives = 90/183 (49%), Gaps = 6/183 (3%)
Frame = +2
Query: 32 PDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTP 196
PDK R CP+C G L K SRFGA F+GC +P CKY +
Sbjct: 588 PDKGDGSNPRACPTCGTGQLSLKTSRFGA--FVGCSNYPECKYTRPV-------GNPENA 638
Query: 197 QQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSIT 373
+ + LG + + + + LK G +G YVQLGE + K PKR+S+P SI
Sbjct: 639 SEVAAASGDRELGRDPETGKVVALKIGRFGPYVQLGEAESKDDKPKRSSLPKAWPPASID 698
Query: 374 LEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALE 553
L+ AL LL P +G HP+DG P+ + + G I + A +P + E+ L +A+
Sbjct: 699 LDRALKLLSLPRKVGDHPEDGKPITAALGRFGPFIEHEKTYANLPSFDEIFEVGLNRAVV 758
Query: 554 LLS 562
LL+
Sbjct: 759 LLA 761
[55][TOP]
>UniRef100_C5AYF9 DNA topoisomerase n=1 Tax=Methylobacterium extorquens AM1
RepID=C5AYF9_METEA
Length = 910
Score = 97.1 bits (240), Expect = 9e-19
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 3/175 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C G L K+ +FGA FIGC +P CKY + L +S + E D
Sbjct: 602 RACPTCGAGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVEGEGDGSSAEGGQPGV 658
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + + + L+ G +G +VQLGE ++ PKR+S+P S+TLE AL L
Sbjct: 659 RVLGDDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPKGTTPGSVTLEIALRL 718
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
L P + KHP+ G P++ + + G +++ A + K+ EI +A++L+
Sbjct: 719 LSLPREVAKHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRAIDLI 773
[56][TOP]
>UniRef100_B7KW94 DNA topoisomerase n=1 Tax=Methylobacterium chloromethanicum CM4
RepID=B7KW94_METC4
Length = 910
Score = 97.1 bits (240), Expect = 9e-19
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 3/175 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C G L K+ +FGA FIGC +P CKY + L +S + E D
Sbjct: 602 RACPTCGAGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVEGEGDGSSAEGGQPGV 658
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + + + L+ G +G +VQLGE ++ PKR+S+P S+TLE AL L
Sbjct: 659 RVLGDDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPKGMTPGSVTLEIALRL 718
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
L P + KHP+ G P++ + + G +++ A + K+ EI +A++L+
Sbjct: 719 LSLPREVAKHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRAIDLI 773
[57][TOP]
>UniRef100_B0UIR7 DNA topoisomerase n=1 Tax=Methylobacterium sp. 4-46
RepID=B0UIR7_METS4
Length = 913
Score = 97.1 bits (240), Expect = 9e-19
Identities = 55/175 (31%), Positives = 94/175 (53%), Gaps = 3/175 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C GTL K+ +FGA F+GC +P CKY + + D D E + +
Sbjct: 602 RACPNCAGGTLSLKLGKFGA--FVGCSNYPECKYTRQLSAAGLDGDGEGSAGEGGQ-PGV 658
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + + + L+ G +G +VQLGE ++ PKR+S+P +TLE AL L
Sbjct: 659 RVLGEDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPRGLTPADVTLETALKL 718
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
L P + +HP+ G P+++ + + G +++ A + K+ EI +A++L+
Sbjct: 719 LALPREVARHPESGEPILVNLGRFGPYVQHGKTYANLGKDDDLLEIGANRAIDLI 773
[58][TOP]
>UniRef100_A9W733 DNA topoisomerase n=1 Tax=Methylobacterium extorquens PA1
RepID=A9W733_METEP
Length = 910
Score = 97.1 bits (240), Expect = 9e-19
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 3/175 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C G L K+ +FGA FIGC +P CKY + L +S + E D
Sbjct: 602 RACPTCGAGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVEGEGDGSSAEGGQPGV 658
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + + + L+ G +G +VQLGE ++ PKR+S+P S+TLE AL L
Sbjct: 659 RVLGEDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPKGMTPGSVTLEIALRL 718
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
L P + KHP+ G P++ + + G +++ A + K+ EI +A++L+
Sbjct: 719 LSLPREVAKHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRAIDLI 773
[59][TOP]
>UniRef100_C7CD03 DNA topoisomerase n=1 Tax=Methylobacterium extorquens DM4
RepID=C7CD03_METED
Length = 910
Score = 97.1 bits (240), Expect = 9e-19
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 3/175 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C G L K+ +FGA FIGC +P CKY + L +S + E D
Sbjct: 602 RACPTCGAGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVEGEGDGSSAEGGQPGV 658
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + + + L+ G +G +VQLGE ++ PKR+S+P S+TLE AL L
Sbjct: 659 RVLGDDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPKGMTSGSVTLEIALRL 718
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
L P + KHP+ G P++ + + G +++ A + K+ EI +A++L+
Sbjct: 719 LSLPREVAKHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRAIDLI 773
[60][TOP]
>UniRef100_C6ADW8 DNA topoisomerase n=1 Tax=Bartonella grahamii as4aup
RepID=C6ADW8_BARGA
Length = 857
Score = 96.7 bits (239), Expect = 1e-18
Identities = 56/173 (32%), Positives = 93/173 (53%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP C G L K+ R+GA F+GC +P CKY T D EE+ +N +EP
Sbjct: 604 RSCPLCKNGQLSLKLGRYGA--FVGCSNYPECKY---THQLGTDTGEENEAVRN---DEP 655
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
+LG + + + I L++G +G Y+QLGE ++ KRA +P +++TL+ AL LL
Sbjct: 656 VILGIDPETGKDISLRNGRFGPYIQLGESKE---VKRAGLPKEWQAENVTLDKALALLSL 712
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+ G + + + G + + K A + + +I + +A+ +L+
Sbjct: 713 PREIGVHPESGKTITATIGRYGPYLSHNGKSARLLHADEVFDIGINRAVTVLA 765
[61][TOP]
>UniRef100_C6X8M3 DNA topoisomerase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X8M3_METSD
Length = 858
Score = 96.3 bits (238), Expect = 2e-18
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
Frame = +2
Query: 35 DKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTI 214
D CP C + L ++ RFG FIGC +P C YI +T
Sbjct: 584 DIGEACPKCGK-PLHSRLGRFGK--FIGCSGYPECDYI------------RNTGSNAAAS 628
Query: 215 EEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT--PKRASVPHVKDVDSITLEDAL 388
EP ++G ++ S++ ILL +GPYG Y+QLG +G PKR S+P + ++ LE A+
Sbjct: 629 SEPVVMGHDAASDKDILLLNGPYGPYLQLGLPEEGSKKKPKRVSIPKEIPLANVDLEVAM 688
Query: 389 VLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L+ P LG+HP+ G ++ + + G + + K +P++ +I L +A+ELL+
Sbjct: 689 KLIALPRDLGQHPETGKKIVANIGRFGPYVNHDGKFKSIPRSDSVFDIDLPRAVELLA 746
[62][TOP]
>UniRef100_A0NTN3 DNA topoisomerase n=1 Tax=Labrenzia aggregata IAM 12614
RepID=A0NTN3_9RHOB
Length = 887
Score = 96.3 bits (238), Expect = 2e-18
Identities = 59/173 (34%), Positives = 89/173 (51%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CPSC G L KVSR+GA FIGC +P C + + S +D E D + P
Sbjct: 609 RKCPSCDSGQLSLKVSRWGA--FIGCSNYPECGFTRQLGKPSGEDGEGD--------DGP 658
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K+LG + + + L+ G +G YVQLGE+ K PKRAS+P + LE AL LL
Sbjct: 659 KVLGTDPETGLDVSLRKGRFGPYVQLGEEAK---PKRASLPRGWSAPDMDLEKALQLLSL 715
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+DG + + + G + + A + + + + +A++ L+
Sbjct: 716 PREVGPHPEDGKMITAGIGRYGPFVLHEGTYANLSTADEVFSVGINRAVDALA 768
[63][TOP]
>UniRef100_A9GZQ5 DNA topoisomerase n=1 Tax=Gluconacetobacter diazotrophicus PAl 5
RepID=A9GZQ5_GLUDA
Length = 924
Score = 95.9 bits (237), Expect = 2e-18
Identities = 61/190 (32%), Positives = 100/190 (52%), Gaps = 5/190 (2%)
Frame = +2
Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
A + F + PD S RVC +C G L K+ R+GA FIGC +P C++ + + +D
Sbjct: 592 APHFFPAHPDGSDPRVCTACGTGRLGLKLGRYGA--FIGCSNYPTCQFTRRLVVDPKEDG 649
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHV 352
E DT + +LLG G E + ++ GP+G+YVQ GE + K P+RA++P
Sbjct: 650 EADTLKDGM-----RLLGQTPGG-EDVTVRRGPWGLYVQQGEPDPEDKKAKPRRATIPRG 703
Query: 353 KDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEI 532
+ D ITL+ AL LL P +G HP+ G + + + G ++ + K+ +
Sbjct: 704 IEGDKITLDQALGLLSLPRVVGIHPETGEQIEAGLGRFGPYVKMGAVYGSLDKDDDILTV 763
Query: 533 TLEKALELLS 562
L +A+++L+
Sbjct: 764 GLNRAVDVLA 773
[64][TOP]
>UniRef100_B8IL44 DNA topoisomerase n=1 Tax=Methylobacterium nodulans ORS 2060
RepID=B8IL44_METNO
Length = 888
Score = 95.5 bits (236), Expect = 3e-18
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 3/175 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C GTL K+ +FGA F+GC +P CKY + L ++ + E D
Sbjct: 602 RACPNCASGTLSLKLGKFGA--FVGCSNYPECKY-TRQLSAAGVEGEGDGSSGEGGQPGQ 658
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + + + L+ G +G +VQLGE ++ PKR+S+P ++LE AL L
Sbjct: 659 RVLGEDPATGLPVTLREGRFGPFVQLGEASAEKGAEKPKRSSLPRGLSPAEVSLETALKL 718
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
L P + +HP+ G P+++ + + G +++ A + K EI +A++L+
Sbjct: 719 LALPREVARHPETGEPILVNLGRFGPYVQHGKTYANLGKGDDLLEIGANRAIDLI 773
[65][TOP]
>UniRef100_Q0BU00 DNA topoisomerase n=1 Tax=Granulibacter bethesdensis CGDNIH1
RepID=Q0BU00_GRABC
Length = 909
Score = 95.1 bits (235), Expect = 3e-18
Identities = 56/175 (32%), Positives = 93/175 (53%), Gaps = 2/175 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C +G L ++ R G+ FIGC +P C Y + + + E T E
Sbjct: 615 RICPACGDGRLGLRLGRHGS--FIGCSNYPGCSYTRRLGIDGAEGEAE------TLKEGM 666
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT--PKRASVPHVKDVDSITLEDALVLL 397
++LG + + E I +K GPYG+YVQ GE +G P+RAS+P D ++I L+ AL LL
Sbjct: 667 RVLGQHPETGEDITVKRGPYGLYVQQGEAEEGSKKKPRRASLPRGVDGETILLDQALGLL 726
Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+ G P+ + + G ++ + K+ + L +A+++L+
Sbjct: 727 SLPRLVGIHPETGEPIEANLGRFGPYVKMGGIYGNLDKDDDVLTVGLNRAVDVLA 781
[66][TOP]
>UniRef100_Q0BZX2 DNA topoisomerase n=1 Tax=Hyphomonas neptunium ATCC 15444
RepID=Q0BZX2_HYPNA
Length = 859
Score = 94.7 bits (234), Expect = 4e-18
Identities = 54/154 (35%), Positives = 81/154 (52%)
Frame = +2
Query: 23 GSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQ 202
G+ + R CP C EG L K+ +FGA F+GC +HP CKY + +SS+ D P
Sbjct: 590 GNPIENPRQCPLCKEGELSMKLGKFGA--FVGCSRHPECKYTRQ--FSSEGGDAAINPDG 645
Query: 203 NTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLED 382
N +G + + ILLKSG +G YV++ K PKRAS+ + +TLE
Sbjct: 646 NE-------IGIHPDTGAMILLKSGRFGPYVEMANGEK---PKRASLAKADNAAELTLER 695
Query: 383 ALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRY 484
A+ LL P +G HP+DG ++ + G +++
Sbjct: 696 AVELLSLPREVGPHPEDGEMILANFGRFGPYVQH 729
[67][TOP]
>UniRef100_A9IU35 DNA topoisomerase n=1 Tax=Bartonella tribocorum CIP 105476
RepID=A9IU35_BART1
Length = 858
Score = 94.7 bits (234), Expect = 4e-18
Identities = 55/173 (31%), Positives = 94/173 (54%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP C G L K+ R+GA F+GC +P C+Y + + D +EE+ +N +EP
Sbjct: 604 RSCPLCKNGQLSLKLGRYGA--FVGCSNYPECRYTRQL--GTTDTEEENEAVRN---DEP 656
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
+LG + + + I L++G +G Y+Q GE ++ KRA +P ++ITLE AL LL
Sbjct: 657 VMLGIDPETGKDISLRNGRFGPYIQRGESKE---VKRAGLPKEWQAENITLERALALLSL 713
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+ G + + + G + + K A + + +I + +A+ +L+
Sbjct: 714 PREIGIHPETGKMITATIGRYGPYLSHNGKSARLLHADEVFDIGINRAVTVLA 766
[68][TOP]
>UniRef100_Q6N559 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris
RepID=Q6N559_RHOPA
Length = 911
Score = 94.4 bits (233), Expect = 6e-18
Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CPSC G L K +FGA F+GC +P C+Y S D +
Sbjct: 603 RQCPSCGTGKLNLKAGKFGA--FVGCSNYPECRYTRPLASDSAGDAD------------- 647
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + S ++ +KSG +G Y+QLGE + +G PKRA +P + LE AL L
Sbjct: 648 RVLGTDPDSGLEVAVKSGRFGPYIQLGEAKDYAEGEKPKRAGIPKGTSPSDVDLEMALKL 707
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +GKHP+ G P+ + + G +++ A + + I L +A+ L++
Sbjct: 708 LALPREVGKHPETGQPIKAGIGRFGPYVQHEKTYASLEAGDDVHTIGLNRAVTLIA 763
[69][TOP]
>UniRef100_B5ZK59 DNA topoisomerase n=1 Tax=Gluconacetobacter diazotrophicus PAl 5
RepID=B5ZK59_GLUDA
Length = 924
Score = 94.4 bits (233), Expect = 6e-18
Identities = 61/189 (32%), Positives = 99/189 (52%), Gaps = 3/189 (1%)
Frame = +2
Query: 5 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 184
F +L GS P RVC +C G L K+ R+GA FIGC +P C++ + + +D E
Sbjct: 596 FPAHLDGSDP---RVCTACGTGRLGLKLGRYGA--FIGCSNYPTCQFTRRLVVDPKEDGE 650
Query: 185 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVK 355
DT + +LLG G E + ++ GP+G+YVQ GE + K P+RA++P
Sbjct: 651 ADTLKDGM-----RLLGQTPGG-EDVTVRRGPWGLYVQQGEPDPEDKKAKPRRATIPRGI 704
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+ D ITL+ AL LL P +G HP+ G + + + G ++ + K+ +
Sbjct: 705 EGDKITLDQALGLLSLPRVVGIHPETGEQIEAGLGRFGPYVKMGAVYGSLDKDDDILTVG 764
Query: 536 LEKALELLS 562
L +A+++L+
Sbjct: 765 LNRAVDVLA 773
[70][TOP]
>UniRef100_B2IEN4 DNA topoisomerase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039
RepID=B2IEN4_BEII9
Length = 961
Score = 94.0 bits (232), Expect = 7e-18
Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 2/184 (1%)
Frame = +2
Query: 14 YLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187
Y+F D S R CPSC G L K+ +FG+ FIGC +P CK+ + +
Sbjct: 590 YIFPDKGDGSNPRACPSCANGQLSLKLGKFGS--FIGCSNYPECKFTRTLSDTGPEGGNG 647
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367
+T + K+LG ++ + E+I L+ G +G YVQ GE K PKRAS+P
Sbjct: 648 ETDRPGV-----KVLGVDAETGEEISLRDGRFGAYVQRGEGEK---PKRASLPKTIAPAD 699
Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547
+TL+ AL LL P + +HP+ P++ + + G +++ A + K+ + +A
Sbjct: 700 LTLDMALGLLSLPREVARHPETHEPILAGIGRFGPYVQHGKTYANIGKDEDILTLGANRA 759
Query: 548 LELL 559
++L+
Sbjct: 760 IDLI 763
[71][TOP]
>UniRef100_UPI0000382C8D COG1754: Uncharacterized C-terminal domain of topoisomerase IA n=1
Tax=Magnetospirillum magnetotacticum MS-1
RepID=UPI0000382C8D
Length = 349
Score = 93.6 bits (231), Expect = 1e-17
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229
CP+C L K+ +FGA FIGC +P CKY + L +S + E D ++
Sbjct: 50 CPTCGSAQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVEGEGDGSSAEGGQPGVRV 106
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
LG + + + L+ G +G +VQLGE ++ PKR+S+P S+TLE AL LL
Sbjct: 107 LGDDPATGLPVTLRDGRFGPFVQLGEASSEKGAEKPKRSSLPKGMTPSSVTLEIALRLLS 166
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
P + KHP+ G P++ + + G +++ A + K+ EI +A++L+
Sbjct: 167 LPREVAKHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRAIDLI 219
[72][TOP]
>UniRef100_Q5FRH2 DNA topoisomerase n=1 Tax=Gluconobacter oxydans RepID=Q5FRH2_GLUOX
Length = 898
Score = 93.6 bits (231), Expect = 1e-17
Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Frame = +2
Query: 14 YLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187
+ F PD + RVC SC G L ++ +FGA FIGC +P C++ + + +E
Sbjct: 591 HFFPPRPDGADPRVCTSCGTGRLGLRLGKFGA--FIGCSNYPTCQFTRRLVA-----EEG 643
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKD 358
DT N + PK+LG + + E + ++ GPYG+Y+Q GE + K PKR ++P D
Sbjct: 644 DTEGLN---DGPKVLGQDPETGEDVTIRRGPYGLYIQRGEPNPEDKKAKPKRTTIPKGLD 700
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
+++TLE AL LL P +G HP+ G + + + G ++ + K+ + L
Sbjct: 701 GNTMTLEQALGLLSLPRLVGLHPETGEKIEAGLGRFGPYVKMGAIYGTLDKDDDVLTVGL 760
Query: 539 EKALELLS 562
+A++ L+
Sbjct: 761 NRAVDALA 768
[73][TOP]
>UniRef100_A1AZS7 DNA topoisomerase n=1 Tax=Paracoccus denitrificans PD1222
RepID=A1AZS7_PARDP
Length = 851
Score = 93.2 bits (230), Expect = 1e-17
Identities = 66/192 (34%), Positives = 101/192 (52%), Gaps = 3/192 (1%)
Frame = +2
Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
A +L+ D S R CP C +G L K +R G G FIGC +P C++ + + S D +
Sbjct: 576 APHLYPPRADGSDPRECPLCHKGRLHLKTARSG-GAFIGCSNYPDCRF-TRPISSPDAEV 633
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKD 358
D +LG ++G ++I LK+G +G YVQ GE + P RAS+P D
Sbjct: 634 VGDA-----------VLGVDNG--DEISLKNGRFGPYVQRGEATAENPKPPRASIPKGWD 680
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITL 538
+ S+ LE AL LL P +G HP+DG PV + + G +++ K A +P + I +
Sbjct: 681 LASVDLERALALLSLPREIGSHPEDGVPVEAGIGRYGPYVKHGAKYANLPDVDEVFTIGM 740
Query: 539 EKALELLSGNNV 574
+A+E+L+ V
Sbjct: 741 NRAVEVLASKQV 752
[74][TOP]
>UniRef100_Q0FZT4 DNA topoisomerase n=1 Tax=Fulvimarina pelagi HTCC2506
RepID=Q0FZT4_9RHIZ
Length = 914
Score = 93.2 bits (230), Expect = 1e-17
Identities = 59/173 (34%), Positives = 88/173 (50%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP C G L K+ R+GA F+GC +P C + + S D E P
Sbjct: 611 RACPRCGNGKLSLKLGRYGA--FVGCSNYPECNFTRQLGTSLAVDSSEAGDDDG-----P 663
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
+ LG + + E I L++G +G YVQ GE ++ R SVP +V SI LE AL LL
Sbjct: 664 RELGNDPETGEPITLRTGRFGPYVQRGEGKEA---SRTSVPKGWEVGSIDLEKALKLLTL 720
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +GKHP+DG P+I+ + + G +++ A V E+ +A+ L++
Sbjct: 721 PREVGKHPEDGEPMIVNLGRYGPYVQHLKTYANVESVEDLFEMGPNRAVSLIA 773
[75][TOP]
>UniRef100_C5V0V2 DNA topoisomerase n=1 Tax=Gallionella ferruginea ES-2
RepID=C5V0V2_9PROT
Length = 872
Score = 93.2 bits (230), Expect = 1e-17
Identities = 66/181 (36%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229
CP C + L K+SR+G+ FI C +P CKY Q+ +E
Sbjct: 586 CPECGK-PLAKKLSRYGS--FISCTNYPECKYKRSV---------GGETQEEVRVE---- 629
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT--PKRASVPHVKDVDSITLEDALVLLQY 403
LG + S + +LL GPYG YVQLGE +G PKR S P VD LE AL LL
Sbjct: 630 LGVHPESAQAVLLLRGPYGHYVQLGEVIEGEKAKPKRVSWPKEMAVDQADLESALKLLSL 689
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS----GNN 571
P LG HP+ VI+ + + G I + K +P+ ++TL++A+ELL+ GN
Sbjct: 690 PKDLGLHPETNKKVIVNIGRFGPYIGHDGKFKSIPRTDSIFDVTLDRAVELLAQAKDGNT 749
Query: 572 V 574
V
Sbjct: 750 V 750
[76][TOP]
>UniRef100_A4TWS2 DNA topoisomerase n=1 Tax=Magnetospirillum gryphiswaldense
RepID=A4TWS2_9PROT
Length = 886
Score = 93.2 bits (230), Expect = 1e-17
Identities = 59/173 (34%), Positives = 86/173 (49%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP C G L K+ +FGA FIGC +P C+Y + + + P + P
Sbjct: 606 RLCPLCNAGRLSLKLGKFGA--FIGCANYPECRYTRPLAVAGEGGEGGGEPLP----DGP 659
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG GS E + L+ GPYG YVQLGE G PKR S+ + +I LE L LL
Sbjct: 660 KELGIEPGSGEPVTLRKGPYGWYVQLGE---GAKPKRVSLYKGLEPGAIDLEIGLKLLAL 716
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G+HP+ + V + G + + + K+ + + +A+ELLS
Sbjct: 717 PRDVGEHPETRKMIKAGVGRFGPYLLHDGVYKSLAKDDDVLTVGMNRAVELLS 769
[77][TOP]
>UniRef100_Q2G7D0 DNA topoisomerase n=1 Tax=Novosphingobium aromaticivorans DSM 12444
RepID=Q2G7D0_NOVAD
Length = 859
Score = 92.4 bits (228), Expect = 2e-17
Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 4/189 (2%)
Frame = +2
Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLY--SSDD 175
+DYLF D + R+CP C EG L + R+GA F+ C +P CKY K +D
Sbjct: 574 SDYLFPPRADGTDPRLCPKCEEGRLSLRGGRYGA--FVACSNYPECKYTRKFAQPGGADG 631
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
D ED LG + + +++ K+G +G Y+QLG+ ++ KRAS+P K
Sbjct: 632 DGGEDGA-----------LGKDPETGLEVVRKAGRFGPYIQLGDGKEA---KRASIP--K 675
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
D+ + LE AL LL P +G HP+ G+P+ + + G + + K A + + E
Sbjct: 676 DIGELDLEWALKLLSLPREVGVHPETGNPITASIGRYGPYLAHDGKYARLKSTAEVFETG 735
Query: 536 LEKALELLS 562
+ A+ LL+
Sbjct: 736 MNAAVMLLA 744
[78][TOP]
>UniRef100_A5AWM5 DNA topoisomerase n=1 Tax=Vitis vinifera RepID=A5AWM5_VITVI
Length = 1039
Score = 92.4 bits (228), Expect = 2e-17
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +2
Query: 2 KFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCK 142
KF D+LF LPDKSR CPSC EGTLIFKVSRFG+GYFIGCDQHP+CK
Sbjct: 993 KFGDFLFSFLPDKSRTCPSCMEGTLIFKVSRFGSGYFIGCDQHPKCK 1039
[79][TOP]
>UniRef100_Q89K08 DNA topoisomerase n=1 Tax=Bradyrhizobium japonicum RepID=Q89K08_BRAJA
Length = 828
Score = 92.0 bits (227), Expect = 3e-17
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CPSC G L K +FGA F+GC +P C+Y + D E T ++
Sbjct: 602 RQCPSCGNGRLNLKAGKFGA--FVGCSNYPECRYTRQLAA-----DSEATADRS------ 648
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394
LG + + + +K+G +G Y+QLGE + +G PKRA +P + LE AL L
Sbjct: 649 --LGQDPDTGRDVWVKAGRFGPYIQLGEQKDYEEGEKPKRAGIPKGTSPGDVELELALKL 706
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +GKHP+ G P+ + + G +++ A + + +I L +A+ L++
Sbjct: 707 LSLPREIGKHPETGQPITAGLGRFGPFVKHEKTYASLEAGDEVFDIGLNRAVTLIA 762
[80][TOP]
>UniRef100_A8I2E5 DNA topoisomerase n=1 Tax=Azorhizobium caulinodans ORS 571
RepID=A8I2E5_AZOC5
Length = 892
Score = 92.0 bits (227), Expect = 3e-17
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 2/185 (1%)
Frame = +2
Query: 14 YLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187
+LF + D S R+CP+C G L K+ +FGA FIGC +P C+Y + L + +
Sbjct: 591 HLFPAKEDGSDPRLCPTCGSGRLSLKMGKFGA--FIGCSNYPECRY-TRPLSGGEGEAGG 647
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367
D ++ LG + + ++ L+ G +G Y+QLGE G PKR+S+P
Sbjct: 648 DGVRK---------LGTDPETGLEVTLRDGRFGAYLQLGEAVDGEKPKRSSLPKGLAPAD 698
Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547
+ LE AL LL P +G HP+DG P++ + + G I++ A + + L +A
Sbjct: 699 VDLETALALLALPRRVGTHPEDGEPILAGIGRFGPYIQHGKVYANLEAADDVLTVGLNRA 758
Query: 548 LELLS 562
+ LL+
Sbjct: 759 VVLLA 763
[81][TOP]
>UniRef100_Q135I0 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris BisB5
RepID=Q135I0_RHOPS
Length = 914
Score = 91.3 bits (225), Expect = 5e-17
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CPSC G L K +FGA F+GC +P C++ D +
Sbjct: 603 RQCPSCGTGRLNLKAGKFGA--FVGCSNYPECRHTRPLAADGGGGDAD------------ 648
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + + ++ +KSG +G Y+QLGE + +G PKRA +P + LE AL L
Sbjct: 649 RVLGIDPDTGFEVAVKSGRFGPYIQLGEAKDYAEGEKPKRAGIPKGTSPSDVELEMALRL 708
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +GKHP+ G P+ + + G +++ A + + I L +A+ L++
Sbjct: 709 LALPREVGKHPETGEPIKAGIGRFGPYVQHEKTYASLEAGDDVHNIGLNRAVTLIA 764
[82][TOP]
>UniRef100_B1M0P4 DNA topoisomerase n=1 Tax=Methylobacterium radiotolerans JCM 2831
RepID=B1M0P4_METRJ
Length = 894
Score = 91.3 bits (225), Expect = 5e-17
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 8/184 (4%)
Frame = +2
Query: 32 PDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTP 196
PDK R CP+C G L K+ +FGA FIGC +P CKY + L ++ D + D
Sbjct: 593 PDKGDGSNPRTCPTCGSGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSATGIDGDGDGS 649
Query: 197 QQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDS 367
++LG + + + L+ G +G ++QLGE ++ PKR+S+P
Sbjct: 650 SAEGGQPGVRVLGDDPATGLPVTLRDGRFGPFLQLGEASTEKGAEKPKRSSLPKGLSPSD 709
Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547
+ L AL LL P + +HP+ G P++ + + G +++ A + K+ EI +A
Sbjct: 710 VDLNKALALLALPREVARHPETGEPILANLGRFGPYVQHGKTYANLGKDDDVLEIGANRA 769
Query: 548 LELL 559
++L+
Sbjct: 770 IDLI 773
[83][TOP]
>UniRef100_B9QWJ1 DNA topoisomerase n=1 Tax=Labrenzia alexandrii DFL-11
RepID=B9QWJ1_9RHOB
Length = 913
Score = 91.3 bits (225), Expect = 5e-17
Identities = 55/173 (31%), Positives = 91/173 (52%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C G L KVSR+GA FIGC+ +P C Y + S ++ E D + P
Sbjct: 609 RKCPACDTGKLSLKVSRWGA--FIGCENYPECGYTRQLGKPSGEEGEAD--------DGP 658
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K+ G + + ++ L++G +G YVQLG + K PKR+S+P + LE AL LL
Sbjct: 659 KVFGEDPETGMEVSLRTGRFGPYVQLGNEAK---PKRSSLPKGWSAADMDLEKALQLLSL 715
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G+HP+DG + + + G + + A + + + + +A++ L+
Sbjct: 716 PREVGEHPEDGKMITAGLGRYGPFVLHDGTYANLSSPDEVFSVGINRAVDALA 768
[84][TOP]
>UniRef100_B3Q9Y2 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris TIE-1
RepID=B3Q9Y2_RHOPT
Length = 911
Score = 90.9 bits (224), Expect = 6e-17
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CPSC G L K +FGA F+GC +P C+Y D +
Sbjct: 603 RQCPSCGNGRLNLKAGKFGA--FVGCTNYPECRYTRPLAADGGADAD------------- 647
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + + ++ +KSG +G Y+QLGE + +G PKRA +P + L+ AL L
Sbjct: 648 RVLGTDPDTGLEVAVKSGRFGPYIQLGEAKDYGEGEKPKRAGIPKGTSPSDVELDVALKL 707
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +GKHP+ G P+ + + G +++ A + + I L +A+ L++
Sbjct: 708 LALPREVGKHPESGQPIKAGIGRFGPYVQHEKTYASLEAGDDVHTIGLNRAVTLIA 763
[85][TOP]
>UniRef100_B9KIC6 DNA topoisomerase n=2 Tax=Anaplasma marginale RepID=B9KIC6_ANAMF
Length = 813
Score = 90.5 bits (223), Expect = 8e-17
Identities = 58/180 (32%), Positives = 95/180 (52%)
Frame = +2
Query: 23 GSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQ 202
G + D+S CP C EG L+ + ++ A F+GC+++P CKY S +E
Sbjct: 594 GEVVDRS--CPGCGEGELMLNIGKYKA--FLGCNRYPECKYTRGIGGESGVCRDEF---- 645
Query: 203 NTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLED 382
PK+LG + + E+I+LK+GPYG Y+QLG++ +G KR +VP + + ITL+
Sbjct: 646 ------PKVLGLDDATQEEIVLKNGPYGEYLQLGDNAQG---KRVAVP--QGIQEITLDV 694
Query: 383 ALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
A LL P+ LG +P + L + G + Y V +TLE+A+++++
Sbjct: 695 AKKLLSLPIVLGNYPDTAQDIKLGTGRFGPYVLYGGTYFSVKGREDFWNLTLEEAVDVIN 754
[86][TOP]
>UniRef100_A9D533 DNA topoisomerase n=1 Tax=Hoeflea phototrophica DFL-43
RepID=A9D533_9RHIZ
Length = 919
Score = 90.5 bits (223), Expect = 8e-17
Identities = 57/173 (32%), Positives = 90/173 (52%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C G L K+ ++GA F+GC +P C + + S+D D D N EP
Sbjct: 647 RICPTCGTGNLSLKLGKYGA--FVGCSNYPDCNFTRQL--SADQDASGDAALSN----EP 698
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG + + E I L++G +G YVQ GE ++ KR+S+P VDSI E AL LL
Sbjct: 699 KDLGKDPHTEEPITLRTGRFGPYVQRGEGKEA---KRSSLPKGWAVDSIDHEKALALLSL 755
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G+HP+ G + + + G + + A + I L +A+ +++
Sbjct: 756 PRDIGQHPETGKMISAGLGRYGPFVLHEKTYANLESIEDVFSIGLNRAVSVIA 808
[87][TOP]
>UniRef100_A3VTI0 DNA topoisomerase n=1 Tax=Parvularcula bermudensis HTCC2503
RepID=A3VTI0_9PROT
Length = 876
Score = 90.5 bits (223), Expect = 8e-17
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C EG L KV R+GA FIGC ++P CK+ S +Q E
Sbjct: 599 RECPTCGEGELSLKVGRYGA--FIGCSRYPECKHTRPLGQS----------EQGNAPAED 646
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
+ LG + +++ + LKSG +G YVQLGE D K PKR+S+P D S+ + A+ L
Sbjct: 647 RQLGVDPDTSQAVWLKSGRFGPYVQLGEPDPDTKE-KPKRSSIPKSWDAASLDFDKAMKL 705
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
L P +G HP+DG + + + G +++ A + +I + +A+ +L
Sbjct: 706 LALPRDVGPHPEDGEMIEASLGRYGPYVKHGKLYANLESIDDVFDIGINRAVAVL 760
[88][TOP]
>UniRef100_Q6FZS1 DNA topoisomerase n=1 Tax=Bartonella quintana RepID=Q6FZS1_BARQU
Length = 853
Score = 90.1 bits (222), Expect = 1e-16
Identities = 52/173 (30%), Positives = 91/173 (52%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP C+ G L K+ R+GA F+GC +P CKY T D EE +N +EP
Sbjct: 604 RSCPLCSSGQLSLKLGRYGA--FVGCSNYPECKY---TRQLGTDPGEEKEVMRN---DEP 655
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
+LG + + + + L++G +G Y+Q+GE ++ KR +P + +TL+ AL L+
Sbjct: 656 VMLGIDPKTGKDVSLRNGRFGPYIQVGEQKEA---KRVRLPKEWQTEKMTLDKALALISL 712
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+ G + + + G + + K A + + +I + +A+ +L+
Sbjct: 713 PREIGIHPETGKIITATIGRYGPYLAHDGKYAPLLHADEIFDIGINRAVTVLA 765
[89][TOP]
>UniRef100_Q215Z3 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris BisB18
RepID=Q215Z3_RHOPB
Length = 922
Score = 90.1 bits (222), Expect = 1e-16
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CPSC G L K +FGA F+GC +P C+Y D +
Sbjct: 603 RQCPSCGTGKLNLKAGKFGA--FVGCSNYPECRYTRPLAADGGGDGD------------- 647
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + S ++ +K+G +G Y+QLG+ + +G PKRA +P + LE AL L
Sbjct: 648 RILGKDPVSGLEVAVKAGRFGPYIQLGDAKDYAEGEKPKRAGIPKNSSPGDMELELALKL 707
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +GKHP+ G P+ + + G +++ A + + +I L +A+ L++
Sbjct: 708 LSLPREVGKHPETGEPIKAGIGRFGPYVQHEKTYASLEAGDEVFDIGLNRAVTLIA 763
[90][TOP]
>UniRef100_Q07L73 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris BisA53
RepID=Q07L73_RHOP5
Length = 944
Score = 90.1 bits (222), Expect = 1e-16
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CPSC G L K +FGA F+GC +P C+Y ++D E D
Sbjct: 628 RQCPSCGTGKLNLKAGKFGA--FVGCSNYPECRYTRPL--AADGGGEGD----------- 672
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + ++ + +K+G +G Y+QLG+ + +G PKRA +P + LE AL L
Sbjct: 673 RILGKDPETDRDVAVKAGRFGPYIQLGDAKDYGEGEKPKRAGIPKNMSPGDVELELALKL 732
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +GKHP+ G P+ + + G +++ A + + I L +A+ L++
Sbjct: 733 LSLPREVGKHPETGEPIKAGIGRFGPYVQHEKTYASLEAGDEVFNIGLNRAVTLIA 788
[91][TOP]
>UniRef100_A5FWG8 DNA topoisomerase n=1 Tax=Acidiphilium cryptum JF-5
RepID=A5FWG8_ACICJ
Length = 891
Score = 90.1 bits (222), Expect = 1e-16
Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
RVC +C G L ++ RFGA FIGC +P C+Y + +D+ + +
Sbjct: 601 RVCQACGTGRLGLRLGRFGA--FIGCSNYPECQYTRRLAVEGGEDEGDQLR------DGM 652
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
KLLG N+ + L+ GPYG+YVQLGE + K P+RA++P ++ITLE A+ L
Sbjct: 653 KLLGENA-EGIPVTLRRGPYGLYVQLGEPDPEDKKAKPRRAALPRGMSGETITLEQAIGL 711
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +G HP+ + + + G ++ A + K+ + L +A+ +L+
Sbjct: 712 LSLPRVIGVHPETKQEIQAGIGRFGPYVKMGPIFASLDKDDDVLAVGLNRAVMVLA 767
[92][TOP]
>UniRef100_A4YWH0 DNA topoisomerase n=1 Tax=Bradyrhizobium sp. ORS278
RepID=A4YWH0_BRASO
Length = 915
Score = 89.7 bits (221), Expect = 1e-16
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C G L K +FGA F+GC +P C+Y ++D + D
Sbjct: 602 RQCPTCGTGRLNLKAGKFGA--FVGCSNYPECRYTRPL--AADSEAAAD----------- 646
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + S ++ +K+G +G Y+QLGE + +G PKRA +P + L+ AL L
Sbjct: 647 RMLGQDPDSGLEVAVKAGRFGPYIQLGEQKDYAEGEKPKRAGIPKGTQPSDVDLDLALKL 706
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +GKHP+ G P+ + + G +++ A + + +I L +A+ L++
Sbjct: 707 LSLPREIGKHPETGLPITAGLGRFGPFVKHDKTYASLEAGDEVFDIGLNRAVTLIA 762
[93][TOP]
>UniRef100_C4WLG0 DNA topoisomerase n=1 Tax=Ochrobactrum intermedium LMG 3301
RepID=C4WLG0_9RHIZ
Length = 885
Score = 89.7 bits (221), Expect = 1e-16
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ ++GA F+GC +P CKY +
Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGKYGA--FVGCSNYPECKYTRQL------ 638
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
D + +EPK LG + + E+I ++G +G YVQ GE ++ KRAS+P
Sbjct: 639 --GGDANGEAAAADEPKSLGKDPFTGEEITARTGRFGPYVQRGEGKEA---KRASLPKGW 693
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
VD++ E A+ LL P +G+HP+ G + + + G + + A + + +
Sbjct: 694 TVDALDHEKAVALLSLPRDIGQHPETGKMISAGIGRYGPYVSHDGTFANLENAEEVFSVG 753
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 754 LNRAVSVLA 762
[94][TOP]
>UniRef100_B4WD40 DNA topoisomerase n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WD40_9CAUL
Length = 875
Score = 89.7 bits (221), Expect = 1e-16
Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 2/185 (1%)
Frame = +2
Query: 14 YLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187
++F + D S R CP C +G L K SRFGA FIGC+++P CKY S +D
Sbjct: 589 HIFPAKEDGSDPRECPLCHQGQLSLKTSRFGA--FIGCERYPDCKYTRPVASPSAEDGSA 646
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367
++ + LG + + + + LK G +G YV++ +G PKR+S+P S
Sbjct: 647 ESGDRE--------LGMDPETGQPVQLKIGRFGPYVEITPP-EGDKPKRSSLPKGWSPAS 697
Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKA 547
+TL+ AL LL P +G HP+DG + + + G + + A V + E+ L +A
Sbjct: 698 LTLDQALRLLALPREVGVHPEDGKMITAGLGRYGPFVLHAGTYANVSDIDEVFEVGLNRA 757
Query: 548 LELLS 562
+ LL+
Sbjct: 758 VALLA 762
[95][TOP]
>UniRef100_C1MSJ2 DNA topoisomerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MSJ2_9CHLO
Length = 1243
Score = 89.7 bits (221), Expect = 1e-16
Identities = 55/164 (33%), Positives = 92/164 (56%), Gaps = 5/164 (3%)
Frame = +2
Query: 41 SRVCPSCTEGTLIFKVSRFGAGYFIGCDQH---PRCKYIAKTLYSSDDDDEEDTPQQNTT 211
SR CP+C +G L K+S+ G FIGC + +C Y A+ + +++ DD E + +
Sbjct: 808 SRRCPACVDGRLGLKLSKNGG--FIGCSNYNTDTKCAY-ARPISTTNGDDAESM-RTDPW 863
Query: 212 IEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV--DSITLEDA 385
+ + ++ G + ++ + ++ GPYG YVQL TP+ + +V +V D +TL A
Sbjct: 864 LSDGEI-GVDPETSRTVSVRRGPYGPYVQLDPTANEGTPRTFGLQNVPEVTADKLTLNVA 922
Query: 386 LVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNT 517
L LL+YP+TLG HP +G V +K+ G+ + + D A +P T
Sbjct: 923 LALLKYPMTLGVHPTEGGDVTMKIGPYGWYVNHGDVNAHIPAKT 966
[96][TOP]
>UniRef100_B8GZL1 DNA topoisomerase n=2 Tax=Caulobacter vibrioides RepID=B8GZL1_CAUCN
Length = 899
Score = 89.4 bits (220), Expect = 2e-16
Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Frame = +2
Query: 32 PDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTP 196
PDK R+CP+C G L K +FGA FIGC +P C+Y + S D D E
Sbjct: 588 PDKGDGSNPRLCPTCGSGQLSLKTGKFGA--FIGCSNYPECRYTRQLGVSEGDGDAESAD 645
Query: 197 QQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQ-LGEDRKGYTPKRASVPHVKDVDSIT 373
+Q LG N + + LK+G +G YV+ L + PKR+S+P ++
Sbjct: 646 KQ---------LGLNPATGLAVWLKNGRFGPYVEELAAEGSSDKPKRSSLPKGWIASAMD 696
Query: 374 LEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALE 553
+E AL LL P +GKHP DG + + + G + + A + + ++ L +A+
Sbjct: 697 MEKALRLLSLPREVGKHPDDGKVITAGLGRFGPFVLHDGTYANLENADEVFDVGLNRAVA 756
Query: 554 LLS 562
+L+
Sbjct: 757 ILA 759
[97][TOP]
>UniRef100_A5EKR5 DNA topoisomerase n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EKR5_BRASB
Length = 916
Score = 89.0 bits (219), Expect = 2e-16
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C G L K +FGA F+GC +P C+Y ++D + D
Sbjct: 602 RQCPTCGTGRLNLKAGKFGA--FVGCSNYPECRYTRPL--AADSEAAAD----------- 646
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + S + +K+G +G Y+QLGE + +G PKRA +P + L+ AL L
Sbjct: 647 RILGQDPDSGLDVAVKAGRFGPYIQLGEQKDYAEGEKPKRAGIPKGTQPSDVDLDLALKL 706
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +GKHP+ G P+ + + G +++ A + + +I L +A+ L++
Sbjct: 707 LSLPREIGKHPETGLPITAGLGRFGPFVKHDKTYASLEAGDEVFDIGLNRAVTLIA 762
[98][TOP]
>UniRef100_Q2IXD6 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris HaA2
RepID=Q2IXD6_RHOP2
Length = 911
Score = 88.6 bits (218), Expect = 3e-16
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CPSC G L K +FGA F+GC +P C++ D +
Sbjct: 603 RQCPSCGTGRLNLKAGKFGA--FVGCSNYPECRHTRPLAADGGGADAD------------ 648
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + + ++ +KSG +G Y+QLG+ + +G PKRA +P + L+ AL L
Sbjct: 649 RVLGLDPDTGFEVAVKSGRFGPYIQLGDAKDYAEGEKPKRAGIPKGTSPSDVELDVALRL 708
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +GKHP+ G P+ + + G +++ A + + I L +A+ L++
Sbjct: 709 LALPREVGKHPETGEPIKAGIGRFGPYVQHEKTYASLEAGDDVHNIGLNRAVTLIA 764
[99][TOP]
>UniRef100_A6X573 DNA topoisomerase n=1 Tax=Ochrobactrum anthropi ATCC 49188
RepID=A6X573_OCHA4
Length = 885
Score = 88.6 bits (218), Expect = 3e-16
Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C G L K+ ++GA F+GC +P CKY +
Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGMLSLKLGKYGA--FVGCSNYPECKYTRQL------ 638
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
D ++ +EPK LG + + E+I ++G +G YVQ GE ++ KRAS+P
Sbjct: 639 --GGDANGESAAADEPKSLGKDPFTGEEITARTGRFGPYVQRGEGKEA---KRASLPKGW 693
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
VD++ E A+ LL P +G+HP+ G + + + G + + A + + +
Sbjct: 694 TVDTLDHEKAVALLSLPRDIGQHPETGKMISAGIGRYGPYVSHDGTFANLENAEEVFSVG 753
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 754 LNRAVSVLA 762
[100][TOP]
>UniRef100_A5VD05 DNA topoisomerase n=1 Tax=Sphingomonas wittichii RW1
RepID=A5VD05_SPHWW
Length = 852
Score = 88.6 bits (218), Expect = 3e-16
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Frame = +2
Query: 8 ADYLFGSLPDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSD 172
A YLF PDK R+CP C EG L + RFGA FI C +P CK+ + +
Sbjct: 582 APYLF---PDKGDGTDPRLCPVCQEGRLSLRGGRFGA--FIACSNYPECKFTRRFAQAGA 636
Query: 173 DDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHV 352
+D DT P ++G + + ++ ++G +G Y+QLG+ G KR+S+P
Sbjct: 637 ANDGADTG--------PVVIGTDPATGLEVSKRAGRFGPYIQLGD---GKDAKRSSIP-- 683
Query: 353 KDV--DSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPN 526
KDV D + L AL LL P +G HP+ GHP+ + + G + + K A + +
Sbjct: 684 KDVLGDDLDLGWALKLLSLPRLIGPHPETGHPITASIGRFGPYLAHDGKYARLGSTAEVF 743
Query: 527 EITLEKALELLS 562
E + A+ L+
Sbjct: 744 ETGMNAAVVKLA 755
[101][TOP]
>UniRef100_Q1QKM0 DNA topoisomerase n=1 Tax=Nitrobacter hamburgensis X14
RepID=Q1QKM0_NITHX
Length = 936
Score = 88.2 bits (217), Expect = 4e-16
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C G L K +FGA F+GC +P C+Y ++D + D
Sbjct: 627 RQCPTCGTGKLNLKAGKFGA--FVGCSNYPECRYTRPL--AADGEAGGD----------- 671
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + S + +KSG +G Y+QLGE +G PKRA +P + L+ A+ L
Sbjct: 672 RILGKDPESGLDVTVKSGRFGPYIQLGEPSDYGEGEKPKRAGIPKNTSPADMELDLAVKL 731
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +GKHP+ G P+ + + G +R+ A + + +I L +A+ L++
Sbjct: 732 LSLPREIGKHPETGEPITAGIGRFGPFVRHEKTYASLEAGDEVFDIGLNRAVTLIA 787
[102][TOP]
>UniRef100_B6JFU9 DNA topoisomerase n=1 Tax=Oligotropha carboxidovorans OM5
RepID=B6JFU9_OLICO
Length = 913
Score = 88.2 bits (217), Expect = 4e-16
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CPSC G L K +FGA F+GC +P C+Y SS D
Sbjct: 603 RQCPSCGTGRLNLKAGKFGA--FVGCSNYPECRYTRPLAASSGTSD-------------- 646
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + +N + +K+G +G Y+QLGE +G PKRA +P + L+ A+ L
Sbjct: 647 RVLGKDPKTNLDVAVKAGRFGPYIQLGEPNDYAEGEKPKRAGIPKNMSPADVELDLAIKL 706
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +G HP+DG + + + G +R+ A + I L +A+ L++
Sbjct: 707 LSLPRDVGPHPEDGEIITAGIGRFGPFVRHGKTYASLEAGDDVYTIGLNRAVTLIA 762
[103][TOP]
>UniRef100_B6RA74 DNA topoisomerase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RA74_9RHOB
Length = 931
Score = 87.8 bits (216), Expect = 5e-16
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 19/196 (9%)
Frame = +2
Query: 32 PDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQH--------------PRCKYIAK 154
PDK R CP C G L KVSRFGA F+GC + P C Y +
Sbjct: 593 PDKEDGSDPRKCPKCDTGRLSLKVSRFGA--FVGCSNYNKDKKDGKEPNENPPHCDYTRQ 650
Query: 155 TLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKR 334
D D + P++LG + + ++ L++G +G YVQLGE+ K PKR
Sbjct: 651 LTSGGDSD-------AGAAADGPQVLGIDPETGLEVSLRTGRFGPYVQLGEEAK---PKR 700
Query: 335 ASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKN 514
+S+P V + LE AL LL P +G HP+DG + + + G + + A +
Sbjct: 701 SSLPRGWSVADLDLEKALQLLSLPREVGTHPEDGKTISAGLGRFGPFVLHDGTYANLDSP 760
Query: 515 TKPNEITLEKALELLS 562
+ + + +A+ LL+
Sbjct: 761 DEVFSVGINRAVTLLA 776
[104][TOP]
>UniRef100_Q8FW60 DNA topoisomerase n=2 Tax=Brucella suis RepID=Q8FW60_BRUSU
Length = 877
Score = 87.4 bits (215), Expect = 7e-16
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++
Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 694 TLDTVDHEKAIALLSLPRNIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 754 LNRAVSVLA 762
[105][TOP]
>UniRef100_Q5GTP5 DNA topoisomerase n=1 Tax=Wolbachia endosymbiont strain TRS of Brugia
malayi RepID=Q5GTP5_WOLTR
Length = 816
Score = 87.4 bits (215), Expect = 7e-16
Identities = 51/177 (28%), Positives = 94/177 (53%), Gaps = 1/177 (0%)
Frame = +2
Query: 41 SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEE 220
++ CP C +G I K++ AG F+GC +P C + + S+D+ E
Sbjct: 597 NKKCPDCPDG--ILKLNFGKAGVFLGCSNYPTCTHTKEITGSNDNS------------EY 642
Query: 221 PKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
PK LG + + +++++K GP+G+Y++ + + K S+P +V+ I L A LL
Sbjct: 643 PKSLGIDGVTEQEVVIKKGPFGLYLEFNSESE--KKKTVSIPKDINVNDIDLSTATRLLS 700
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKP-NEITLEKALELLSGN 568
P +G+HP+ G V + + + GY I Y K + K+ K EI L++A+++++ +
Sbjct: 701 LPKVIGEHPETGKEVKIGLGRFGYYIFYDSKYFSLKKSFKEVLEIQLDEAVQIIANS 757
[106][TOP]
>UniRef100_B3CTT6 DNA topoisomerase n=1 Tax=Orientia tsutsugamushi str. Ikeda
RepID=B3CTT6_ORITI
Length = 788
Score = 87.4 bits (215), Expect = 7e-16
Identities = 51/193 (26%), Positives = 98/193 (50%), Gaps = 5/193 (2%)
Frame = +2
Query: 8 ADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 181
+++LF + D++ ++C C G L K+S++GA F+ CD +P C + + +++D
Sbjct: 582 SNFLFPAQNDETDHKLCTLCKVGKLSLKLSKYGA--FLACDNYPSCNFTRNIAAAFENND 639
Query: 182 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGED--RKGYTPKRASVPHV- 352
+ N K +G++ + I LK GP+G Y+Q GED K PKR + +
Sbjct: 640 NLPKGKNN------KAIGYSDDMQKTIYLKEGPFGWYIQAGEDSTNKNDKPKRVPISVIS 693
Query: 353 KDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEI 532
ITLE A+ LL P +G +P + + V + G +++ K +PKN +
Sbjct: 694 SSPQDITLETAVKLLALPKVIGLNPNTNKEITVAVGRYGPYLKHDGKFISIPKNYDYLNL 753
Query: 533 TLEKALELLSGNN 571
++ +++++ ++
Sbjct: 754 SINDCIKIITSSS 766
[107][TOP]
>UniRef100_A9MBP4 DNA topoisomerase n=2 Tax=Brucella RepID=A9MBP4_BRUC2
Length = 877
Score = 87.4 bits (215), Expect = 7e-16
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++
Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 694 TLDTVDHEKAIALLSLPRNIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 754 LNRAVSVLA 762
[108][TOP]
>UniRef100_B6BVC6 DNA topoisomerase n=1 Tax=beta proteobacterium KB13
RepID=B6BVC6_9PROT
Length = 823
Score = 87.4 bits (215), Expect = 7e-16
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 3/179 (1%)
Frame = +2
Query: 35 DKSRVCPSCTEGTLIFKVSRFGA-GYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTT 211
D + CP C G +F SR G G FIGC +P C Y +EED
Sbjct: 586 DINESCPKC--GQALF--SRLGRRGKFIGCSGYPDCDYTRNV-------NEEDGAN---- 630
Query: 212 IEEPKLLGFNSGSNEKILLKSGPYGIYVQLG--EDRKGYTPKRASVPHVKDVDSITLEDA 385
EP+++ + +++ +LL GPYG Y+Q+G E+ PKR S+P + S+ + A
Sbjct: 631 --EPQVIFHDQETDKDVLLLRGPYGPYLQIGVPEEDSKTKPKRVSIPPNIPISSVNEQVA 688
Query: 386 LVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L+ PL LG +P+ G P++ + + G + + K +PK +IT ++A+EL++
Sbjct: 689 KQLMSLPLALGDYPETGKPIVANIGRFGPYVSHDGKFKSIPKADNIFDITFDRAVELVA 747
[109][TOP]
>UniRef100_A3WWV5 DNA topoisomerase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWV5_9BRAD
Length = 910
Score = 87.4 bits (215), Expect = 7e-16
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C G L K +FGA F+GC +P C+Y ++D D D
Sbjct: 602 RQCPTCGTGRLNLKAGKFGA--FVGCSNYPDCRYTRPL--AADGDAGGD----------- 646
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + S + +KSG +G Y+QLGE +G PKRA +P + L+ A+ L
Sbjct: 647 RVLGKDPESGLDVAVKSGRFGPYIQLGEATDYAEGEKPKRAGIPKNTSPADMELDLAVKL 706
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +GKHP+ G P+ + + G +R+ A + + +I L +A+ L++
Sbjct: 707 LSLPREIGKHPETGAPITAGIGRFGPFVRHEKTYASLEAGDEVFDIGLNRAVTLIA 762
[110][TOP]
>UniRef100_C9V5N7 DNA topoisomerase I n=2 Tax=Brucella neotomae 5K33 RepID=C9V5N7_BRUNE
Length = 877
Score = 87.0 bits (214), Expect = 9e-16
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++
Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 754 LNRAVSVLA 762
[111][TOP]
>UniRef100_D0B740 DNA topoisomerase I n=4 Tax=Brucella RepID=D0B740_BRUME
Length = 877
Score = 87.0 bits (214), Expect = 9e-16
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++
Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 754 LNRAVSVLA 762
[112][TOP]
>UniRef100_C9U9S4 DNA topoisomerase I n=4 Tax=Brucella abortus RepID=C9U9S4_BRUAB
Length = 877
Score = 87.0 bits (214), Expect = 9e-16
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++
Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 645 E--------TAASDEPKPLGKDPFTGEQITARTGRFGPYIQRGEGKEA---KRASLPKGW 693
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 754 LNRAVSVLA 762
[113][TOP]
>UniRef100_UPI0001B4856F DNA topoisomerase I n=1 Tax=Brucella pinnipedialis M163/99/10
RepID=UPI0001B4856F
Length = 828
Score = 87.0 bits (214), Expect = 9e-16
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++
Sbjct: 596 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 653
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 654 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 702
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 703 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 762
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 763 LNRAVSVLA 771
[114][TOP]
>UniRef100_UPI0001B48528 DNA topoisomerase I n=2 Tax=Brucella suis bv. 5 str. 513
RepID=UPI0001B48528
Length = 886
Score = 87.0 bits (214), Expect = 9e-16
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++
Sbjct: 596 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 653
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 654 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 702
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 703 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 762
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 763 LNRAVSVLA 771
[115][TOP]
>UniRef100_C9T181 DNA topoisomerase I n=2 Tax=Brucella ceti M644/93/1
RepID=C9T181_9RHIZ
Length = 877
Score = 87.0 bits (214), Expect = 9e-16
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++
Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 754 LNRAVSVLA 762
[116][TOP]
>UniRef100_C7LI90 DNA topoisomerase I n=4 Tax=Brucella RepID=C7LI90_BRUMC
Length = 877
Score = 87.0 bits (214), Expect = 9e-16
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++
Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 754 LNRAVSVLA 762
[117][TOP]
>UniRef100_Q8YC66 DNA topoisomerase n=1 Tax=Brucella melitensis RepID=Q8YC66_BRUME
Length = 901
Score = 87.0 bits (214), Expect = 9e-16
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++
Sbjct: 611 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 668
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 669 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 717
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 718 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 777
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 778 LNRAVSVLA 786
[118][TOP]
>UniRef100_A9WYS3 DNA topoisomerase n=1 Tax=Brucella suis ATCC 23445 RepID=A9WYS3_BRUSI
Length = 877
Score = 87.0 bits (214), Expect = 9e-16
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++
Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 754 LNRAVSVLA 762
[119][TOP]
>UniRef100_A5VUT6 DNA topoisomerase n=1 Tax=Brucella ovis ATCC 25840 RepID=A5VUT6_BRUO2
Length = 877
Score = 87.0 bits (214), Expect = 9e-16
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++
Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 754 LNRAVSVLA 762
[120][TOP]
>UniRef100_A1UT28 DNA topoisomerase n=1 Tax=Bartonella bacilliformis KC583
RepID=A1UT28_BARBK
Length = 869
Score = 87.0 bits (214), Expect = 9e-16
Identities = 54/173 (31%), Positives = 87/173 (50%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R C C G L K+ R+GA F+GC +P CKY T D EE N +EP
Sbjct: 604 RSCSLCKHGQLSLKLGRYGA--FVGCSNYPECKY---TKQLGTDAGEEREAAHN---DEP 655
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
+LG + + + I L++G +G Y+QLGE G KR+ +P +++ L+ AL LL
Sbjct: 656 VILGVDPETGKDIFLRNGRFGPYIQLGE---GKEAKRSGLPKGWKTENVNLDKALSLLSL 712
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+ G + + + G + + K A + +I + +A+ +L+
Sbjct: 713 PREVGIHPETGQMITATIGRYGPYLTHDRKYAALSNVDDVFDIGINRAVTVLA 765
[121][TOP]
>UniRef100_C9TJZ0 DNA topoisomerase I n=1 Tax=Brucella pinnipedialis M163/99/10
RepID=C9TJZ0_9RHIZ
Length = 848
Score = 87.0 bits (214), Expect = 9e-16
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++
Sbjct: 616 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 673
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 674 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 722
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 723 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 782
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 783 LNRAVSVLA 791
[122][TOP]
>UniRef100_C9TAH4 DNA topoisomerase I n=1 Tax=Brucella ceti M13/05/1 RepID=C9TAH4_9RHIZ
Length = 877
Score = 87.0 bits (214), Expect = 9e-16
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + ++
Sbjct: 587 ELAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 644
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 645 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 693
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 694 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 753
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 754 LNRAVSVLA 762
[123][TOP]
>UniRef100_Q3SRW8 DNA topoisomerase n=1 Tax=Nitrobacter winogradskyi Nb-255
RepID=Q3SRW8_NITWN
Length = 911
Score = 86.7 bits (213), Expect = 1e-15
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C G L K +FGA F+GC +P C++ ++D + D
Sbjct: 602 RQCPTCGTGRLNLKAGKFGA--FVGCSNYPECRHTRPL--AADGEAGGD----------- 646
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + S + +KSG +G Y+QLGE +G PKRA +P I L+ A+ L
Sbjct: 647 RVLGKDPESGLDVAVKSGRFGPYIQLGEASDYGEGEKPKRAGIPKNTSPADIELDLAVKL 706
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +GKHP+ G P+ + + G +R+ A + + +I L +A+ L++
Sbjct: 707 LSLPREIGKHPETGEPITAGIGRFGPFVRHEKTYASLEAGDEVFDIGLNRAVTLIA 762
[124][TOP]
>UniRef100_B2SB52 DNA topoisomerase n=1 Tax=Brucella abortus S19 RepID=B2SB52_BRUA1
Length = 828
Score = 86.7 bits (213), Expect = 1e-15
Identities = 51/173 (29%), Positives = 89/173 (51%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C GTL K+ R+GA F+GC +P CKY + ++ + +EP
Sbjct: 554 RSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANGE--------TAASDEP 603
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG + + E+I ++G +G Y+Q GE ++ KRAS+P +D++ E A+ LL
Sbjct: 604 KPLGKDPFTGEQITARTGRFGPYIQRGEGKEA---KRASLPKGWTLDTVDHEKAIALLSL 660
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+ G + + + G + + A + + + L +A+ +L+
Sbjct: 661 PRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVGLNRAVSVLA 713
[125][TOP]
>UniRef100_Q4EA11 DNA topoisomerase (Fragment) n=1 Tax=Wolbachia endosymbiont of
Drosophila ananassae RepID=Q4EA11_9RICK
Length = 496
Score = 86.7 bits (213), Expect = 1e-15
Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229
CP+C G I K++ AG F+GC +P C + + S+D+ E PK
Sbjct: 319 CPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDNS------------EYPKS 364
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPL 409
LG + +N+++++K GP+G+Y++ + K K S+P +V+ I L A LL P
Sbjct: 365 LGVDGITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDINVNEIDLSTATQLLSLPK 422
Query: 410 TLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT-LEKALELLSGN 568
+G+HP+ G V + + + GY I Y K + K++K T L +A+++++ +
Sbjct: 423 VIGEHPETGKEVKIGLGRFGYYIFYDGKYFSLKKSSKEVLNTELSEAVQIIANS 476
[126][TOP]
>UniRef100_C0R4C4 DNA topoisomerase n=2 Tax=Wolbachia RepID=C0R4C4_WOLWR
Length = 816
Score = 86.7 bits (213), Expect = 1e-15
Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229
CP+C G I K++ AG F+GC +P C + + S+D+ E PK
Sbjct: 600 CPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDNS------------EYPKS 645
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPL 409
LG + +N+++++K GP+G+Y++ + K K S+P +V+ I L A LL P
Sbjct: 646 LGVDGITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDINVNEIDLSTATQLLSLPK 703
Query: 410 TLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT-LEKALELLSGN 568
+G+HP+ G V + + + GY I Y K + K++K T L +A+++++ +
Sbjct: 704 VIGEHPETGKEVKIGLGRFGYYIFYDGKYFSLKKSSKEVLNTELSEAVQIIANS 757
[127][TOP]
>UniRef100_Q2YKM3 DNA topoisomerase n=4 Tax=Brucella abortus RepID=Q2YKM3_BRUA2
Length = 877
Score = 86.7 bits (213), Expect = 1e-15
Identities = 51/173 (29%), Positives = 89/173 (51%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C GTL K+ R+GA F+GC +P CKY + ++ + +EP
Sbjct: 603 RSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANGE--------TAASDEP 652
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG + + E+I ++G +G Y+Q GE ++ KRAS+P +D++ E A+ LL
Sbjct: 653 KPLGKDPFTGEQITARTGRFGPYIQRGEGKEA---KRASLPKGWTLDTVDHEKAIALLSL 709
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+ G + + + G + + A + + + L +A+ +L+
Sbjct: 710 PRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVGLNRAVSVLA 762
[128][TOP]
>UniRef100_B9JDL6 DNA topoisomerase n=1 Tax=Agrobacterium radiobacter K84
RepID=B9JDL6_AGRRK
Length = 889
Score = 86.3 bits (212), Expect = 2e-15
Identities = 47/142 (33%), Positives = 74/142 (52%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+C C G L K+ ++GA F+GC +P C Y + E T + + + EP
Sbjct: 608 RICQVCGTGNLSLKLGKYGA--FVGCSNYPECNYTRQL------SSEGGTEAEASGLNEP 659
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG + +NE++ L+SG +G Y+Q G+ G KRAS+P + I E A+ L+
Sbjct: 660 KALGTDPVTNEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWKPEDIDYEKAMALISL 716
Query: 404 PLTLGKHPKDGHPVILKVAKGG 469
P +GKHP+ G + + + G
Sbjct: 717 PRDIGKHPESGKMISSGIGRYG 738
[129][TOP]
>UniRef100_UPI0000384A7F COG0550: Topoisomerase IA n=1 Tax=Magnetospirillum magnetotacticum
MS-1 RepID=UPI0000384A7F
Length = 895
Score = 85.9 bits (211), Expect = 2e-15
Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C G L K+ +FGA FIGC +P C++ + L + + +EE E P
Sbjct: 601 RSCPTCNAGRLSLKLGKFGA--FIGCSAYPECRF-TRPLTTGGEGEEE-------VREGP 650
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGED-----------RKGYTPKRASVPHVKDVD-- 364
K LG + S + L+ GPYG YVQLG++ KG K A P K V
Sbjct: 651 KELGNDPASGLPVSLRKGPYGHYVQLGDESTMKAEPAPVPEKGKKAKAAKTPKPKRVSLY 710
Query: 365 ------SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPN 526
+TL+ A LL+ P +G HP+ G + V + G + + + K+
Sbjct: 711 KGLEPADVTLDIACRLLELPRLVGTHPETGKSISAGVGRFGPYVVHDGTYKSLAKDDDVL 770
Query: 527 EITLEKALELLS 562
I + +A+ELLS
Sbjct: 771 VIGMNRAMELLS 782
[130][TOP]
>UniRef100_Q73G34 DNA topoisomerase n=1 Tax=Wolbachia endosymbiont of Drosophila
melanogaster RepID=Q73G34_WOLPM
Length = 816
Score = 85.9 bits (211), Expect = 2e-15
Identities = 51/174 (29%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229
CP+C G I K++ AG F+GC +P C + + S+D+ E PK
Sbjct: 600 CPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDNS------------EYPKS 645
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPL 409
LG + +N+++++K GP+G+Y++ + K K S+P +V+ I L A LL P
Sbjct: 646 LGIDDITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDINVNEIDLSTATQLLSLPK 703
Query: 410 TLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT-LEKALELLSGN 568
+G+HP+ G V + + + GY I Y + + K++K T L +A+++++ +
Sbjct: 704 VIGEHPETGKEVKIGLGRFGYYIFYDGRYFSLKKSSKEVLNTELSEAVQIIANS 757
[131][TOP]
>UniRef100_B5ZYP8 DNA topoisomerase n=1 Tax=Rhizobium leguminosarum bv. trifolii
WSM2304 RepID=B5ZYP8_RHILW
Length = 884
Score = 85.9 bits (211), Expect = 2e-15
Identities = 49/142 (34%), Positives = 75/142 (52%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+C C G L K+ ++GA F+GC +P C Y + SS++ E D I EP
Sbjct: 606 RICQVCGTGNLSLKLGKYGA--FVGCSNYPECNYTRQL--SSENGGEAD----GAAINEP 657
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG + + E++ L+SG +G Y+Q G+ G KRAS+P + I E A+ L+
Sbjct: 658 KNLGTDPTTGEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWKPEDIDYEKAMALISL 714
Query: 404 PLTLGKHPKDGHPVILKVAKGG 469
P +GKHP+ G + + + G
Sbjct: 715 PRDIGKHPESGKMISSGIGRYG 736
[132][TOP]
>UniRef100_C0F991 DNA topoisomerase I (Fragment) n=1 Tax=Wolbachia endosymbiont of
Muscidifurax uniraptor RepID=C0F991_9RICK
Length = 376
Score = 85.9 bits (211), Expect = 2e-15
Identities = 51/174 (29%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229
CP+C G I K++ AG F+GC +P C + + S+D+ E PK
Sbjct: 160 CPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDNS------------EYPKS 205
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPL 409
LG + +N+++++K GP+G+Y++ + K K S+P +V+ I L A LL P
Sbjct: 206 LGIDDITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDINVNEIDLSTATQLLSLPK 263
Query: 410 TLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT-LEKALELLSGN 568
+G+HP+ G V + + + GY I Y + + K++K T L +A+++++ +
Sbjct: 264 VIGEHPETGKEVKIGLGRFGYYIFYDGRYFSLKKSSKEVLNTELSEAVQIIANS 317
[133][TOP]
>UniRef100_UPI0000DAED1D hypothetical protein Wendoof_01000097 n=1 Tax=Wolbachia endosymbiont
of Drosophila willistoni TSC#14030-0811.24
RepID=UPI0000DAED1D
Length = 760
Score = 85.5 bits (210), Expect = 3e-15
Identities = 48/157 (30%), Positives = 82/157 (52%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229
CP+C G I K++ AG F+GC +P C + + S+D+ E PK
Sbjct: 600 CPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDNS------------EYPKS 645
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPL 409
LG + +N+++++K GP+G+Y++ + K K S+P +V+ I L A LL P
Sbjct: 646 LGIDDITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDINVNEIDLSTATQLLSLPK 703
Query: 410 TLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTK 520
+G+HP+ G V + + + GY I Y + + K++K
Sbjct: 704 VIGEHPETGKEVKIGLGRFGYYIFYDGRYFSLKKSSK 740
[134][TOP]
>UniRef100_UPI0001B481FA DNA topoisomerase I n=1 Tax=Brucella sp. 83/13 RepID=UPI0001B481FA
Length = 886
Score = 85.1 bits (209), Expect = 3e-15
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R CP+C G L K+ R+GA F+GC +P CKY + ++
Sbjct: 596 ELAPLVFPAREDGSDPRSCPTCGTGVLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANG 653
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ +EPK LG + + E+I ++G +G Y+Q GE ++ KRAS+P
Sbjct: 654 E--------TAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGEGKEA---KRASLPKGW 702
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+D++ E A+ LL P +G HP+ G + + + G + + A + + +
Sbjct: 703 TLDTVDHEKAIALLSLPRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVG 762
Query: 536 LEKALELLS 562
L +A+ +L+
Sbjct: 763 LNRAVSVLA 771
[135][TOP]
>UniRef100_Q578A3 DNA topoisomerase n=1 Tax=Brucella abortus RepID=Q578A3_BRUAB
Length = 877
Score = 85.1 bits (209), Expect = 3e-15
Identities = 50/173 (28%), Positives = 88/173 (50%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C GTL K+ R+GA F+GC +P CKY + ++ + +EP
Sbjct: 603 RSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQLGGEANGE--------TAASDEP 652
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG + + E+I ++G +G Y+Q GE ++ KR S+P +D++ E A+ LL
Sbjct: 653 KPLGKDPFTGEQITARTGRFGPYIQRGEGKEA---KRTSLPKGWTLDTVDHEKAIALLSL 709
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+ G + + + G + + A + + + L +A+ +L+
Sbjct: 710 PRDIGLHPETGKMISAGIGRYGPYVSHDGTFANLENVEEVFSVGLNRAVSVLA 762
[136][TOP]
>UniRef100_Q3SMS7 DNA topoisomerase n=1 Tax=Thiobacillus denitrificans ATCC 25259
RepID=Q3SMS7_THIDA
Length = 857
Score = 85.1 bits (209), Expect = 3e-15
Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 3/174 (1%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229
CP C + L + S+ G FIGC +P C Y P T E +
Sbjct: 574 CPKCAK-PLFMQASK--RGLFIGCSGYPECDYTR--------------PLHPATAEGDNI 616
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLG---EDRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
LG + S + L SG +G YVQ+G ED+K P+RAS P +++ TL+ AL L
Sbjct: 617 LGKDPASGLDVKLLSGRFGPYVQIGDMPEDKKAPKPRRASWPKDIPLENATLDLALKFLS 676
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP G P++ + G + + K +PK EI L +ALE+L+
Sbjct: 677 LPREVGHHPTTGLPIVANNGRFGPYLLHDGKFKSIPKTDSVYEIDLPRALEVLA 730
[137][TOP]
>UniRef100_Q1NAF4 DNA topoisomerase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NAF4_9SPHN
Length = 855
Score = 85.1 bits (209), Expect = 3e-15
Identities = 51/173 (29%), Positives = 84/173 (48%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP C +G L + RFGA FI C +P CKY K D E+ P+
Sbjct: 585 RACPMCGDGQLALRGGRFGA--FIACSNYPDCKYTRKFGQPGGKDGEDTGPE-------- 634
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
+LG + + + I KSG +G Y+++GE ++ KR S+P +TL+ A+ LL
Sbjct: 635 -VLGQHPETGQDITRKSGRFGPYIEMGEGKEA---KRGSIPKDLPDGELTLDWAVKLLSL 690
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+ G P++ + + G + + K + + E+ + A+ L+
Sbjct: 691 PREVGLHPETGKPIVANIGRFGPYLLHDGKYGRLSNTAEIFEVGMNSAVVKLA 743
[138][TOP]
>UniRef100_C6XHN6 DNA topoisomerase n=1 Tax=Candidatus Liberibacter asiaticus str.
psy62 RepID=C6XHN6_LIBAP
Length = 837
Score = 84.7 bits (208), Expect = 5e-15
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 1/177 (0%)
Frame = +2
Query: 35 DKSRVCPSCTEGTLIFKVS-RFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTT 211
+ SR CP C +L K+S ++GA F+GC +P CKY + PQ
Sbjct: 600 EDSRTCPECHTHSLSLKLSSKYGA--FVGCTNYPECKYTRQLT---------SNPQDIPE 648
Query: 212 IEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALV 391
++E LLG + + E + L+SG +G+YVQ G+ G KR S+P DS+ + A+
Sbjct: 649 MKESVLLGNDLETKESVTLRSGRFGLYVQRGD---GKDAKRCSLPKTWKSDSVDYDKAMS 705
Query: 392 LLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
LL P +G HP+ +I K GY + + + + I LE+A+ ++
Sbjct: 706 LLSLPREIGIHPETQKNIIAGTGKYGYYLNHDGAYTKLESIEQVLTIDLEQAISCIT 762
[139][TOP]
>UniRef100_C1ZPX2 DNA topoisomerase n=1 Tax=Rhodothermus marinus DSM 4252
RepID=C1ZPX2_RHOMR
Length = 858
Score = 84.7 bits (208), Expect = 5e-15
Identities = 44/115 (38%), Positives = 68/115 (59%)
Frame = +2
Query: 218 EPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLL 397
E ++LG + + +LL+ GPYG YVQLG+D + PKR ++P + + LE A LL
Sbjct: 666 EDRVLGIDPETGMPVLLRRGPYGYYVQLGDDEQAGKPKRVALPPGMEPAVVDLETARALL 725
Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
Q P TLG HP+ G PV++ + + G +++ A + + I LE+ALELL+
Sbjct: 726 QLPRTLGTHPETGQPVLVGIGRYGPYVQHGRTFASLKEEDDVFTIDLERALELLA 780
Score = 55.5 bits (132), Expect = 3e-06
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 7/131 (5%)
Frame = +2
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367
D ++ P+ LG + + + +L+ G YG YVQ G AS+ DV +
Sbjct: 717 DLETARALLQLPRTLGTHPETGQPVLVGIGRYGPYVQHGRTF-------ASLKEEDDVFT 769
Query: 368 ITLEDALVLL------QYPL-TLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPN 526
I LE AL LL PL LG HP+ G PV + + G +++ A +P+ P
Sbjct: 770 IDLERALELLAEKEARSRPLRVLGTHPETGEPVEVWEGRYGPYVKHGRTNASLPEGRAPE 829
Query: 527 EITLEKALELL 559
ITLE+AL LL
Sbjct: 830 AITLEEALALL 840
[140][TOP]
>UniRef100_Q1MII0 DNA topoisomerase n=1 Tax=Rhizobium leguminosarum bv. viciae 3841
RepID=Q1MII0_RHIL3
Length = 884
Score = 84.3 bits (207), Expect = 6e-15
Identities = 47/142 (33%), Positives = 76/142 (53%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+C C G L K+ ++GA F+GC +P C Y + SS++ E D + EP
Sbjct: 606 RICQVCGTGNLSLKLGKYGA--FVGCSNYPDCNYTRQL--SSENGGEAD----GAALNEP 657
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG + + E++ L+SG +G Y+Q G+ ++ KRAS+P + I E A+ L+
Sbjct: 658 KNLGTDPTTGEELTLRSGRFGPYIQRGDGKEA---KRASLPKGWKPEDIDYEKAMALISL 714
Query: 404 PLTLGKHPKDGHPVILKVAKGG 469
P +GKHP+ G + + + G
Sbjct: 715 PRDIGKHPESGKMISSGIGRYG 736
[141][TOP]
>UniRef100_B0T0I9 DNA topoisomerase n=1 Tax=Caulobacter sp. K31 RepID=B0T0I9_CAUSK
Length = 896
Score = 84.3 bits (207), Expect = 6e-15
Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 6/183 (3%)
Frame = +2
Query: 32 PDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTP 196
PDK R+CP+C G L KV +FGA FIGC +P C++ + L +++ + E +
Sbjct: 588 PDKGDGSDPRLCPTCGTGQLSLKVGKFGA--FIGCSNYPECRF-TRQLATAEGEGEAEAA 644
Query: 197 QQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQL-GEDRKGYTPKRASVPHVKDVDSIT 373
K LG N + + LK+G +G YV+ + G PKR+S+P +
Sbjct: 645 D--------KELGINPATGRAVWLKNGRFGPYVEEPAAEGSGDKPKRSSLPKGWTPAGLD 696
Query: 374 LEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALE 553
LE AL LL P +G HP DG + + + G + + A + + +I L +A+
Sbjct: 697 LEKALRLLALPREVGMHPDDGKKITAGLGRFGPFVLHEGTYANLENPEEVFDIGLNRAVA 756
Query: 554 LLS 562
LL+
Sbjct: 757 LLA 759
[142][TOP]
>UniRef100_C6P2V7 DNA topoisomerase n=1 Tax=Sideroxydans lithotrophicus ES-1
RepID=C6P2V7_9GAMM
Length = 876
Score = 84.3 bits (207), Expect = 6e-15
Identities = 62/174 (35%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGA-GYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPK 226
CP C G + K R G G FIGC +P C Y EED E K
Sbjct: 587 CPKC--GKPLSK--RLGKRGSFIGCTGYPECDYTRSL------GGEEDAG------ESRK 630
Query: 227 LLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT--PKRASVPHVKDVDSITLEDALVLLQ 400
LG + +N+ +LL GPYG YVQLGE +G PKR S P ++ L AL LL
Sbjct: 631 ELGQHPDTNQLVLLLRGPYGPYVQLGEMIEGEKTKPKRVSWPKELPLEQADLPSALKLLS 690
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+ G VI+ + + G I + K +P+ +I L++++ELL+
Sbjct: 691 LPREVGAHPETGKKVIVNIGRFGPYIGHDGKFKSIPRTDSIFDIGLDRSVELLA 744
[143][TOP]
>UniRef100_B3CNR3 DNA topoisomerase n=2 Tax=Wolbachia endosymbiont of Culex
quinquefasciatus RepID=B3CNR3_WOLPP
Length = 816
Score = 84.3 bits (207), Expect = 6e-15
Identities = 49/174 (28%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229
CP+C+ G I K++ AG F+GC +P C + + S+D+ E PK
Sbjct: 600 CPNCSGG--ILKLNFGKAGVFLGCSNYPACNHTKEITGSNDNS------------EYPKS 645
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPL 409
LG + + +++++K GP+G+Y++ + + K+ SVP +V+ I L A LL P
Sbjct: 646 LGIDDVTGQEVMIKKGPFGLYLEFNSESE--KKKKISVPKDINVNDIDLNTATRLLSLPK 703
Query: 410 TLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKP-NEITLEKALELLSGN 568
+G+HP+ G V + + + GY I Y + + K++K + L +A++++ +
Sbjct: 704 IIGEHPETGKEVKIGLGRFGYYILYDGRYFSLKKSSKEVLDTQLNEAIQIIESS 757
[144][TOP]
>UniRef100_B5K6L9 DNA topoisomerase n=1 Tax=Octadecabacter antarcticus 238
RepID=B5K6L9_9RHOB
Length = 889
Score = 84.3 bits (207), Expect = 6e-15
Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C G L + +R G G FIGC +P CKY + DD P E
Sbjct: 595 RLCPNCNVGRLSMRTARSG-GAFIGCSNYPECKY-TRAFGPPGQDDASGIPP------EG 646
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
K LG + G +KI + G +G Y Q GE + P R SVP + +TLE A+ LL
Sbjct: 647 KELGMDDG--DKIWIHKGRFGPYAQRGEVTEENKKPNRQSVPKEWPPEDVTLETAVKLLS 704
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490
P +G HP+DG V + + G I++ +
Sbjct: 705 LPRLIGTHPEDGVNVFANIGRYGPYIKHAE 734
[145][TOP]
>UniRef100_B9NA31 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NA31_POPTR
Length = 86
Score = 84.3 bits (207), Expect = 6e-15
Identities = 43/73 (58%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Frame = +2
Query: 140 KYIAKTLYSSDDDDEEDTPQQ--NTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR 313
+YIAKTLY DD+EE+TPQ +T ++E KLL + S+EK++LK GPYG YVQLGEDR
Sbjct: 10 RYIAKTLYG--DDEEEETPQDTNDTNVDETKLLDVHPTSDEKVVLKKGPYGFYVQLGEDR 67
Query: 314 KGYTPKRASVPHV 352
G T KR+SV H+
Sbjct: 68 TGCTLKRSSVSHL 80
[146][TOP]
>UniRef100_Q2K9P9 DNA topoisomerase n=1 Tax=Rhizobium etli CFN 42 RepID=Q2K9P9_RHIEC
Length = 884
Score = 84.0 bits (206), Expect = 8e-15
Identities = 51/173 (29%), Positives = 87/173 (50%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+C C G L K+ R+GA F+GC +P C Y + SS++ E + + EP
Sbjct: 606 RICQVCGTGNLSLKLGRYGA--FVGCSNYPECNYTRQL--SSENGGEAE----GVALNEP 657
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG + + E++ L+SG +G Y+Q G+ G KRAS+P + I E A+ L+
Sbjct: 658 KSLGTDPTTGEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWKPEDIDYEKAMALISL 714
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G+HP+ G + + + G + + A + + L +A+ L++
Sbjct: 715 PRDIGRHPETGKMISSGIGRYGPFLLHDGSYANLETVEDVFSVGLNRAVTLIA 767
[147][TOP]
>UniRef100_C8SRW7 DNA topoisomerase type IA zn finger domain protein n=1
Tax=Mesorhizobium opportunistum WSM2075
RepID=C8SRW7_9RHIZ
Length = 291
Score = 84.0 bits (206), Expect = 8e-15
Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R+CP C G L K+ +FGA F+GC +P C + + +++
Sbjct: 8 ELAPLVFPAREDGSNPRICPKCGTGNLSLKLGKFGA--FVGCSNYPECSFTRQLGDAANP 65
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ E + T K+LG + + E+I L+SG +G Y+Q G+ ++ KR+S+P
Sbjct: 66 NGENGGGEDGT-----KVLGKDPYTAEEITLRSGRFGPYIQRGDGKEA---KRSSLPKGW 117
Query: 356 DVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEIT 535
+SI E AL LL P +GKHP+ G + + + G + + A V I
Sbjct: 118 TPESIDHEKALALLSLPRDVGKHPESGKMISAGLGRYGPFVLHDGTYANVDSIEDVFSIG 177
Query: 536 LEKALELLS 562
L +A+ +++
Sbjct: 178 LNRAVTVIA 186
[148][TOP]
>UniRef100_UPI00019049A4 DNA topoisomerase I n=1 Tax=Rhizobium etli 8C-3 RepID=UPI00019049A4
Length = 378
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/142 (33%), Positives = 75/142 (52%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+C C G L K+ ++GA F+GC +P C Y + SS++ E + + EP
Sbjct: 243 RICQVCGTGNLSLKLGKYGA--FVGCSNYPECNYTRQL--SSENGGEAE----GVALNEP 294
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG + + E++ L+SG +G Y+Q G+ G KRAS+P + I E A+ L+
Sbjct: 295 KNLGTDPTTGEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWKPEDIDYEKAMALISL 351
Query: 404 PLTLGKHPKDGHPVILKVAKGG 469
P +GKHP+ G + + + G
Sbjct: 352 PRDIGKHPETGKMISSGIGRYG 373
[149][TOP]
>UniRef100_C6AUV4 DNA topoisomerase n=1 Tax=Rhizobium leguminosarum bv. trifolii
WSM1325 RepID=C6AUV4_RHILS
Length = 884
Score = 83.2 bits (204), Expect = 1e-14
Identities = 46/142 (32%), Positives = 76/142 (53%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+C C G L K+ ++GA F+GC +P C Y + SS++ + D + EP
Sbjct: 606 RICQVCGTGNLSLKLGKYGA--FVGCSNYPDCNYTRQL--SSENGGDAD----GAALNEP 657
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG + + E++ L+SG +G Y+Q G+ ++ KRAS+P + I E A+ L+
Sbjct: 658 KNLGTDPTTGEELTLRSGRFGPYIQRGDGKEA---KRASLPKGWKPEDIDYEKAMALISL 714
Query: 404 PLTLGKHPKDGHPVILKVAKGG 469
P +GKHP+ G + + + G
Sbjct: 715 PRDIGKHPESGKMISSGIGRYG 736
[150][TOP]
>UniRef100_B3PW33 DNA topoisomerase n=1 Tax=Rhizobium etli CIAT 652
RepID=B3PW33_RHIE6
Length = 884
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/142 (33%), Positives = 75/142 (52%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+C C G L K+ ++GA F+GC +P C Y + SS++ E + + EP
Sbjct: 606 RICQVCGTGNLSLKLGKYGA--FVGCSNYPECNYTRQL--SSENGGEAE----GVALNEP 657
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG + + E++ L+SG +G Y+Q G+ G KRAS+P + I E A+ L+
Sbjct: 658 KNLGTDPTTGEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWKPEDIDYEKAMALISL 714
Query: 404 PLTLGKHPKDGHPVILKVAKGG 469
P +GKHP+ G + + + G
Sbjct: 715 PRDIGKHPETGKMISSGIGRYG 736
[151][TOP]
>UniRef100_B9TJX8 Putative uncharacterized protein n=1 Tax=Ricinus communis
RepID=B9TJX8_RICCO
Length = 290
Score = 83.2 bits (204), Expect = 1e-14
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Frame = +2
Query: 47 VCPSCTEGTLIFKVSRFGAGYFIGCDQH---PRCKYIAKTLYSSDDDDEEDTPQQNTTIE 217
+CP C L ++SR+G+ FIGC + P+C Y + + +
Sbjct: 1 MCPKCGR-QLQKQLSRYGS--FIGCTGYNATPKCDY------------KRNLDGEANAAS 45
Query: 218 EPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG--YTPKRASVPHVKDVDSITLEDALV 391
EP ++G + + + I L +GPYG Y+Q+G+ +G PKR S+P + I ++ A +
Sbjct: 46 EPVVIGQDVDTQKDIYLMNGPYGPYLQVGQPVEGDKKKPKRVSIPKEIPLSQINIDTAHM 105
Query: 392 LLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLSGNN 571
LL P LG+HP+ G ++ + + G + + K +PK I LE A++LL+ N
Sbjct: 106 LLSLPRDLGQHPETGKKIVANIGRFGPYVNHDGKFKSIPKTESVFSIDLEGAVKLLAAAN 165
[152][TOP]
>UniRef100_A8II62 DNA topoisomerase (Fragment) n=1 Tax=Chlamydomonas reinhardtii
RepID=A8II62_CHLRE
Length = 772
Score = 83.2 bits (204), Expect = 1e-14
Identities = 56/154 (36%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Frame = +2
Query: 23 GSLPDKS-RVCPSCTEGTLIFKVSRFGAGYFIGC----DQHPRCKYIAKTLYSSDDDDEE 187
G P + R CP C G L+ K SR+G FIGC D+ +C + L S D
Sbjct: 616 GPAPQRDPRRCPKCGVGRLVLKPSRYGG--FIGCSNFADEALQCDFARPLLPSEGADGGS 673
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDS 367
P T +LLG + + + + ++ GPYG+YVQ G+ K PK+ + S
Sbjct: 674 CVPFNATE----RLLGSHPDTGQPVYVRLGPYGLYVQAGDAPKK-EPKKKKTGFT--IQS 726
Query: 368 ITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGG 469
+TLE AL LL P TLG HP DG PV+ G
Sbjct: 727 VTLEAALALLALPRTLGLHPGDGQPVVANTGPFG 760
[153][TOP]
>UniRef100_Q92QL9 DNA topoisomerase n=1 Tax=Sinorhizobium meliloti RepID=Q92QL9_RHIME
Length = 900
Score = 82.8 bits (203), Expect = 2e-14
Identities = 53/173 (30%), Positives = 87/173 (50%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+C C G L K+ ++GA F+GC +P C Y + SSD + + + N EP
Sbjct: 612 RICQVCGTGKLSLKLGKYGA--FVGCSNYPECNYTRQL--SSDSNGDAEAAAAN----EP 663
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
+ LG + + E+I L++G +G YVQ G+ ++ KRAS+P +I E AL LL
Sbjct: 664 QSLGKDPHTGEEITLRNGRFGPYVQRGDGKEA---KRASLPKGWTPAAIDHEKALALLSL 720
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+ G + + + G + + A + I L +A+ +L+
Sbjct: 721 PRDIGPHPESGKMISTGIGRYGPFVLHNGTYANLESVEDVFSIGLNRAISVLA 773
[154][TOP]
>UniRef100_C3MA93 DNA topoisomerase n=1 Tax=Rhizobium sp. NGR234 RepID=C3MA93_RHISN
Length = 890
Score = 82.8 bits (203), Expect = 2e-14
Identities = 56/173 (32%), Positives = 85/173 (49%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R C C G L K+ ++GA F+GC +P C Y + SSD + + + N EP
Sbjct: 606 RTCQVCGTGKLSLKLGKYGA--FVGCSNYPECNYTRQL--SSDSNGDAEAAVSN----EP 657
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
+ LG + + E+I L+SG +G YVQ G+ G KRAS+P +I E AL LL
Sbjct: 658 QSLGKDPHTGEEITLRSGRFGPYVQRGD---GKDAKRASLPKGWTPATIDHEKALALLSL 714
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +GKHP+ G + + + G + + A + I L +A+ L+
Sbjct: 715 PRDIGKHPETGKMISTGIGRYGPFVLHDGTYANLESVEDVFSIGLNRAVSALA 767
[155][TOP]
>UniRef100_A9CJ93 DNA topoisomerase n=1 Tax=Agrobacterium tumefaciens str. C58
RepID=A9CJ93_AGRT5
Length = 892
Score = 82.8 bits (203), Expect = 2e-14
Identities = 48/142 (33%), Positives = 74/142 (52%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+C C G L K+ ++GA F+GC +P C Y T + D E D N EP
Sbjct: 606 RICQVCGTGNLSLKLGKYGA--FVGCSNYPECNY---TRQLTSDGAEADAAASN----EP 656
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG + + E++ L+SG +G Y+Q G+ ++ KR+S+P + I E AL L+
Sbjct: 657 KALGADPMTGEELTLRSGRFGPYIQRGDGKEA---KRSSLPKGWKPEDIDHEKALALINL 713
Query: 404 PLTLGKHPKDGHPVILKVAKGG 469
P +GKHP+ G + + + G
Sbjct: 714 PRDIGKHPETGKMISAGLGRYG 735
[156][TOP]
>UniRef100_A5CF60 DNA topoisomerase n=1 Tax=Orientia tsutsugamushi str. Boryong
RepID=A5CF60_ORITB
Length = 788
Score = 82.8 bits (203), Expect = 2e-14
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
++C C G L K+S++GA F+ C+ +P C + + +++D + N
Sbjct: 596 KLCTLCKVGKLSLKLSKYGA--FLACNNYPSCNFTRNIAAAFENNDNLPKGKNN------ 647
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGED--RKGYTPKRASVPHV-KDVDSITLEDALVL 394
K +G++ + I LK GP+G Y+Q GED K PKR + + ITLE A+ L
Sbjct: 648 KAIGYSDDMQKTIYLKEGPFGWYIQAGEDSTNKNDKPKRVPISVISSSPQDITLETAVKL 707
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +G +P + + V + G +++ K +PKN +++ +++++
Sbjct: 708 LALPKVIGLNPNTNKEITVAVGRYGPYLKHDGKFISIPKNYDYLNLSINDCIKIIT 763
[157][TOP]
>UniRef100_Q2CAE0 DNA topoisomerase n=1 Tax=Oceanicola granulosus HTCC2516
RepID=Q2CAE0_9RHOB
Length = 870
Score = 82.8 bits (203), Expect = 2e-14
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 9/182 (4%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP C EG L K SR G F+GC ++P C+Y T ++ ED
Sbjct: 594 RECPLCKEGRLHLKTSRTGG--FVGCSRYPECRY---TRPIGGEEQSED----------- 637
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + G ++I L++G +G YVQ GE D K P RAS+P D++ LE AL L
Sbjct: 638 RVLGVDDG--DEISLRTGRFGPYVQRGEVTEDNK--KPPRASLPKGWAPDAMDLEKALRL 693
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYR--DKIALVPKNTKPN----EITLEKALEL 556
L P +G HP+DG P+ + G + ++ D+ V N K EI + +A+EL
Sbjct: 694 LSLPREVGLHPEDGQPIKANFGRFGPFLIHQKPDEAKPVYANLKDPDDVFEIGMNRAVEL 753
Query: 557 LS 562
L+
Sbjct: 754 LA 755
[158][TOP]
>UniRef100_B5IY09 DNA topoisomerase n=1 Tax=Octadecabacter antarcticus 307
RepID=B5IY09_9RHOB
Length = 888
Score = 82.8 bits (203), Expect = 2e-14
Identities = 55/152 (36%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C G L + +R G G FIGC +P CKY + DD P E
Sbjct: 594 RLCPNCNVGRLSMRTARSG-GAFIGCSNYPECKY-TRAFGPPGQDDASGIPP------EG 645
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
K LG + G +KI + G +G Y Q GE D K P R SVP + +TLE A+ L
Sbjct: 646 KELGVDDG--DKIWIHKGRFGPYAQRGEVTEDNK--KPNRQSVPKEWPPEDVTLETAVRL 701
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490
L P +G HP+DG V + + G I++ +
Sbjct: 702 LSLPRLIGTHPEDGVNVFANIGRYGPYIKHAE 733
[159][TOP]
>UniRef100_Q5LNX4 DNA topoisomerase n=1 Tax=Ruegeria pomeroyi RepID=Q5LNX4_SILPO
Length = 880
Score = 82.4 bits (202), Expect = 2e-14
Identities = 50/132 (37%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP C G L K SR G F+GC +P C+Y +DD E
Sbjct: 625 RICPKCGTGQLHLKTSRTGG--FVGCGNYPECRYTRPISGDADDSAE------------- 669
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
+LLG + G ++I LK+G +G YVQ GE + P RAS+P + + LE ALVLL
Sbjct: 670 RLLGEDGG--DEIWLKAGRFGPYVQRGEISEENKKPPRASLPRGWSAEDLDLEKALVLLS 727
Query: 401 YPLTLGKHPKDG 436
P +G+HP+ G
Sbjct: 728 LPRQIGQHPEGG 739
[160][TOP]
>UniRef100_Q2NB87 DNA topoisomerase n=1 Tax=Erythrobacter litoralis HTCC2594
RepID=Q2NB87_ERYLH
Length = 845
Score = 82.4 bits (202), Expect = 2e-14
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Frame = +2
Query: 8 ADYLFGSLPD--KSRVCPSCTE-----GTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYS 166
+DYLF D + R CP C + G L + R+GA F+ C +P CKY +
Sbjct: 572 SDYLFPPTEDGTEPRACPLCRDEGREGGRLALRGGRYGA--FVACANYPECKYTRRFAQ- 628
Query: 167 SDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVP 346
P N + + ++G + + E I KSG +G YVQ+GE ++ KRAS+P
Sbjct: 629 ---------PGGNESAADDGIMGQHPETGEDIERKSGRFGPYVQMGEGKEA---KRASIP 676
Query: 347 HVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPN 526
KD+D L+ A+ LL P +G HP+ G + + + G +R+ K +
Sbjct: 677 --KDLDDFDLDWAVKLLDLPRIVGAHPETGKEIEAAIGRYGPYLRHDGKYGKLQSTRDVF 734
Query: 527 EITLEKALELLS 562
E+ + A+ +L+
Sbjct: 735 EVGMNAAVTILA 746
[161][TOP]
>UniRef100_Q1GTU5 DNA topoisomerase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GTU5_SPHAL
Length = 849
Score = 82.0 bits (201), Expect = 3e-14
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Frame = +2
Query: 14 YLFGSLPDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 178
YLF PDKS R+CP+C G L + +FG FI C +P CK+ K S +
Sbjct: 573 YLF---PDKSDGSDPRLCPNCGTGRLALRGGKFGP--FIACSNYPDCKFTRKFAQSGGNG 627
Query: 179 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 358
+ ++ P+ LG + S ++ +SG +G Y+QLGE G KR+S+P
Sbjct: 628 EADNGPET---------LGTDPESGLEVTKRSGRFGPYIQLGE---GSEAKRSSIPKDIP 675
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIA 499
+ L+ AL LL P +G HP+ G P++ + + G + + K A
Sbjct: 676 AEDFDLDYALRLLSLPREVGVHPESGKPIMAGLGRYGPYLLHDGKYA 722
[162][TOP]
>UniRef100_Q11IM5 DNA topoisomerase n=1 Tax=Chelativorans sp. BNC1 RepID=Q11IM5_MESSB
Length = 849
Score = 82.0 bits (201), Expect = 3e-14
Identities = 51/173 (29%), Positives = 84/173 (48%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP C G L K+ R+GA F+GC +P C Y + ++ + + +
Sbjct: 603 RICPKCGAGKLSLKLGRYGA--FVGCSNYPECDYTRQL-----GENPAENGEAEAGLNGN 655
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K+LG + + E+I L+SG +G YVQ GE G KRA +P + + E A+ LL
Sbjct: 656 KVLGTDPFTGEEITLRSGRFGPYVQRGE---GKDAKRAGLPKGWTPEDLDHEKAIALLSL 712
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +GKHP+ G + + + G + + A + + L +A+ LL+
Sbjct: 713 PRDVGKHPETGKMISAGIGRYGPFLLHDGTYANLETVEDVFSVGLNRAVSLLA 765
[163][TOP]
>UniRef100_A6U807 DNA topoisomerase n=1 Tax=Sinorhizobium medicae WSM419
RepID=A6U807_SINMW
Length = 914
Score = 82.0 bits (201), Expect = 3e-14
Identities = 54/173 (31%), Positives = 85/173 (49%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+C C G L K+ ++GA F+GC +P C Y + SSD + + N EP
Sbjct: 626 RICQVCGTGKLSLKLGKYGA--FVGCSNYPECNYTRQL--SSDSSGDAEAAASN----EP 677
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
+ LG + + E+I L++G +G YVQ G+ ++ KRAS+P +I E AL LL
Sbjct: 678 QSLGKDPHTGEEITLRNGRFGPYVQRGDGKEA---KRASLPKGWTPATIDHEKALALLSL 734
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P LG HP+ G + + + G + + A + I L +A +L+
Sbjct: 735 PRDLGPHPETGKMISAGIGRYGPFVLHNGTYANLESVEDVFSIGLNRATSVLA 787
[164][TOP]
>UniRef100_C6QH43 DNA topoisomerase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888
RepID=C6QH43_9RHIZ
Length = 920
Score = 82.0 bits (201), Expect = 3e-14
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Frame = +2
Query: 32 PDKS-----RVCPSCTEGTLIFKVS-RFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDT 193
PDK R+CP C +G L K+S ++GA FIGC +P C Y + S+++ +
Sbjct: 606 PDKGDGSDPRLCPKCNQGRLSLKISGKYGA--FIGCGNYPECNYTRQLSQSANNGE---- 659
Query: 194 PQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSIT 373
+ K+LG+N + L++G +G Y+QLGE PKR+S+P D ++
Sbjct: 660 -----AALDGKVLGYND-DGIAVALRTGRFGPYIQLGEATGDEKPKRSSIPKGIDAATLD 713
Query: 374 LEDALVLLQYPLTLGKHPKDGHPVILKVAKGG 469
E A+ LL P +G HP +G + + + G
Sbjct: 714 FEKAMQLLSLPRDVGVHPTEGGMITASLGRFG 745
[165][TOP]
>UniRef100_A7HX05 DNA topoisomerase n=1 Tax=Parvibaculum lavamentivorans DS-1
RepID=A7HX05_PARL1
Length = 894
Score = 81.3 bits (199), Expect = 5e-14
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CPSC G L KV RFGA F+GC +P CK+ + ++ +++
Sbjct: 601 RACPSCGNGILSLKVGRFGA--FVGCSNYPDCKFTRQLTVGAEGEEQAGD---------- 648
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQ---LGEDRKGYTPKRASVPHVKDVDSITLEDALVL 394
++LG + + ++ LK+G +G YV+ LG+D K PKR+ +P + L+ AL L
Sbjct: 649 RVLGTDPETGAEVSLKTGRFGPYVERAPLGDDEK---PKRSGLPAKMSAADVDLDTALRL 705
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P +G HP+ G + + + G + + A + + +I L +A+ +L+
Sbjct: 706 LTLPREIGIHPETGKKITAGLGRFGPFVLHDGTYANLKDPEELFDIGLNRAIAVLA 761
[166][TOP]
>UniRef100_C7DBD0 DNA topoisomerase n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DBD0_9RHOB
Length = 881
Score = 81.3 bits (199), Expect = 5e-14
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Frame = +2
Query: 14 YLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187
+LF D S R+CP+C EG L + +R G G FIGC ++P C+Y + + E
Sbjct: 581 HLFPPTEDGSDPRLCPNCNEGRLSMRTARSG-GAFIGCSRYPDCRY-TRAFGPPGTEPES 638
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKD 358
P E K+LG ++G +KI + G +G Y Q GE D K P R SVP
Sbjct: 639 AIPP------EGKILGEDAG--DKIWIHKGRFGPYAQRGEVTEDNK--KPPRQSVPADWA 688
Query: 359 VDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490
+ +TLE A+ LL P LG HP+DG V + + G +++ +
Sbjct: 689 PEDVTLETAVKLLALPRELGPHPEDGVTVWANIGRYGPYLKHAE 732
[167][TOP]
>UniRef100_Q2W9I9 DNA topoisomerase n=1 Tax=Magnetospirillum magneticum AMB-1
RepID=Q2W9I9_MAGSA
Length = 898
Score = 80.9 bits (198), Expect = 7e-14
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP+C G L K+ +FGA FIGC +P C++ + L + + +EE E P
Sbjct: 603 RSCPTCNAGRLSLKLGKFGA--FIGCSAYPECRF-TRPLTTGGEGEEE-------VREGP 652
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-----------------------KGYTPKR 334
K LG + S + L+ GPYG YVQLG++ K PKR
Sbjct: 653 KELGNDPESGLPVTLRKGPYGHYVQLGDETTLKAEPAPVPEKGKKAPKTAKAVKAPKPKR 712
Query: 335 ASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKN 514
S+ + +TL+ A LL P +G HP+ G + V + G + + + K+
Sbjct: 713 VSLYKGLEPAGVTLDIACRLLALPRLVGTHPETGKSISAGVGRFGPYVVHDGVYKSLAKD 772
Query: 515 TKPNEITLEKALELLS 562
I + +A+ELLS
Sbjct: 773 DDVLVIGMNRAMELLS 788
[168][TOP]
>UniRef100_C1ZEL8 DNA topoisomerase n=1 Tax=Planctomyces limnophilus DSM 3776
RepID=C1ZEL8_PLALI
Length = 895
Score = 80.9 bits (198), Expect = 7e-14
Identities = 50/160 (31%), Positives = 80/160 (50%)
Frame = +2
Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262
++ +FGA + D P I + +D +E + P+ LG + S I
Sbjct: 618 RLGKFGAFFEGERDGQPVTATIPDDIAPADLTNELAEKLITQKSQGPQSLGIDPESGLPI 677
Query: 263 LLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHP 442
L GP+G Y+QLGE + G P+R S+P +DV ++ LEDAL ++ P LG HP+ G
Sbjct: 678 FLLIGPFGPYLQLGEMKDGEKPRRVSIPKTRDVSTVKLEDALEYMKLPKALGPHPETGKV 737
Query: 443 VILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
V + G + + + K ++T+E+ALELL+
Sbjct: 738 VKAGIGMYGPYVHHDKTYKSLDKTDDILQMTMERALELLA 777
[169][TOP]
>UniRef100_B6IN35 DNA topoisomerase n=1 Tax=Rhodospirillum centenum SW
RepID=B6IN35_RHOCS
Length = 930
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Frame = +2
Query: 41 SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEE 220
+RVCP+C G L K+ + G FIGC +P C+Y + + + E
Sbjct: 607 ARVCPTCGTGRLSLKLGKSGG--FIGCSNYPECRYTRPLSVAGEGGEAESGD-------- 656
Query: 221 PKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLL 397
++LG + ++ + +K+G +G YVQLG D K PKRAS+P ++ L+ AL LL
Sbjct: 657 -RMLGNDPETSLPVWVKTGRFGAYVQLGNGDGKEEKPKRASLPRGMLPATMDLDTALRLL 715
Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRY 484
P +LG HP+ G ++ + + G +++
Sbjct: 716 ALPRSLGTHPESGLEIVAGIGRYGPYLKH 744
[170][TOP]
>UniRef100_A4EEH4 DNA topoisomerase n=1 Tax=Roseobacter sp. CCS2 RepID=A4EEH4_9RHOB
Length = 866
Score = 80.1 bits (196), Expect = 1e-13
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C G L + +R G G FIGC +P C+Y + + + P E
Sbjct: 593 RLCPNCGAGRLSMRTARSG-GAFIGCSNYPECRYTRAFGPPNPEAELSAIPP------EG 645
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
KLLG + G ++I + G +G Y Q GE D K PKR S+P + + +TL+ AL+L
Sbjct: 646 KLLGTDEG--DEIRIFKGRFGPYAQRGEVTEDNK--KPKRQSIPDGWEPEEVTLDQALML 701
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490
L P LG HP+DG V + + G +++ +
Sbjct: 702 LSLPRELGPHPEDGVAVWANLGRYGPYLKHAE 733
[171][TOP]
>UniRef100_Q1YNI1 DNA topoisomerase n=1 Tax=Aurantimonas manganoxydans SI85-9A1
RepID=Q1YNI1_MOBAS
Length = 923
Score = 79.7 bits (195), Expect = 1e-13
Identities = 50/173 (28%), Positives = 83/173 (47%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP C G L K+ +FGA F+GC +P C Y + + D E P
Sbjct: 609 RACPRCGNGQLSLKLGKFGA--FVGCSNYPDCGYTRQLGTNMSGDGA-------AMDEGP 659
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
LG + + E + L++G +G YVQ GE ++ KR+S+P + L+ AL LL
Sbjct: 660 SDLGVDPETGEPVTLRTGRFGPYVQRGEGKEA---KRSSLPKGWQASEMDLDKALRLLSL 716
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+ G P++ + + G + + A + E+ L +A+ +++
Sbjct: 717 PREVGLHPESGKPILAGLGRYGPFLNHDGMYANLETIEDVFEVGLNRAVTVIA 769
[172][TOP]
>UniRef100_A3UJW6 DNA topoisomerase n=1 Tax=Oceanicaulis alexandrii HTCC2633
RepID=A3UJW6_9RHOB
Length = 884
Score = 79.7 bits (195), Expect = 1e-13
Identities = 49/172 (28%), Positives = 87/172 (50%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
+VCP C EG L ++ + GA F+GC +P C+Y + L + D +
Sbjct: 599 KVCPKCNEGALSLRLGKHGA--FVGCSNYPDCRY-TRPLGGGELD----------AVAGD 645
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
LG + + I+LK G +G Y+++ + + P+R S+P D SITLE A+ L+
Sbjct: 646 GELGEHPETGAMIVLKDGRFGPYLEMQVEDED-KPRRGSIPKGWDPASITLEKAVALIDL 704
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
P +G HP+DG + + + G +++ A + + E+ L +A++L+
Sbjct: 705 PRKVGPHPEDGEMIEAGIGRYGPFVKHGKTYANLANADEVFEVGLNRAVDLI 756
[173][TOP]
>UniRef100_A3SIS1 DNA topoisomerase n=1 Tax=Roseovarius nubinhibens ISM
RepID=A3SIS1_9RHOB
Length = 868
Score = 79.7 bits (195), Expect = 1e-13
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 2/175 (1%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP C EG L K SR G F+GC +P C+Y + D+ +
Sbjct: 593 RICPLCGEGKLHLKTSRSGG--FVGCGNYPECRYTRPIGGEAGDNGD------------- 637
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE--DRKGYTPKRASVPHVKDVDSITLEDALVLL 397
++LG ++G ++I L+SG +G YVQ GE + P RAS+P + L+ AL+LL
Sbjct: 638 RVLGEDNG--DEISLRSGRFGPYVQRGEATEENNKKPPRASLPKGWQPAEMDLDKALLLL 695
Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+DG + + + G +++ A + + + + +A+E+L+
Sbjct: 696 SLPREVGPHPEDGELIEAGIGRYGPFVKHGRTYANLESVDEVFTVGMNRAVEVLA 750
[174][TOP]
>UniRef100_A3TZ47 DNA topoisomerase n=1 Tax=Oceanicola batsensis HTCC2597
RepID=A3TZ47_9RHOB
Length = 867
Score = 79.0 bits (193), Expect = 2e-13
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Frame = +2
Query: 14 YLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187
+LF D S R+CP C G L + +R G G FIGC +P C+Y + D + E
Sbjct: 580 HLFPPTEDGSDPRLCPHCGAGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDAEAE 636
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364
+ E KLLG + G ++I + G +G YVQ GE + P R SVP +
Sbjct: 637 ----ASAIPPEGKLLGVDDG--DEIRVFKGRFGPYVQRGEVTEENKKPPRQSVPKDWVPE 690
Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490
+TLE ++LL P +G+HP+DG V + + G I++ +
Sbjct: 691 DLTLEQGVMLLTLPRLIGQHPEDGVSVWANIGRYGPYIKHAE 732
[175][TOP]
>UniRef100_C6WSV7 DNA topoisomerase n=1 Tax=Methylotenera mobilis JLW8
RepID=C6WSV7_METML
Length = 864
Score = 78.2 bits (191), Expect = 4e-13
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQH---PRCKYIAKTLYSSDDDDEEDTPQQNTTIEE 220
CP C + L ++SRFG+ FIGC + P+C Y + T T +
Sbjct: 587 CPKCGK-PLQKQLSRFGS--FIGCTGYNDTPKCDYKRSI---------DGTANAGT---D 631
Query: 221 PKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT--PKRASVPHVKDVDSITLEDALVL 394
P +G ++ ++++I L +GPYG Y+Q+G +G PKR S+P + + LE A +L
Sbjct: 632 PVSIGVDAATSKEIYLMNGPYGPYLQVGMAVEGEKKKPKRVSIPKEIALADVNLETANML 691
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
L P LG HP+ +I + + G I + K +PKN I L+ A+ LL+
Sbjct: 692 LSLPRDLGLHPETNKKIIANIGRFGPYINHDAKFKSIPKNLSVFSIDLDGAVALLA 747
Score = 55.5 bits (132), Expect = 3e-06
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Frame = +2
Query: 203 NTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLED 382
N + P+ LG + +N+KI+ G +G Y+ + K S+P V SI L+
Sbjct: 689 NMLLSLPRDLGLHPETNKKIIANIGRFGPYIN-------HDAKFKSIPKNLSVFSIDLDG 741
Query: 383 ALVLLQYPLT-------LGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLE 541
A+ LL T LG HP + + + + G +++ A +PK+ +P +T+E
Sbjct: 742 AVALLAQAHTGPAPLCSLGSHPTEDGQIEVFAGRYGPYVQHGKLRATLPKSIEPESLTME 801
Query: 542 KALELLS 562
+ALELLS
Sbjct: 802 EALELLS 808
[176][TOP]
>UniRef100_C6V581 DNA topoisomerase n=1 Tax=Neorickettsia risticii str. Illinois
RepID=C6V581_NEORI
Length = 827
Score = 78.2 bits (191), Expect = 4e-13
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 2/172 (1%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229
CP C +G + VSR+G F+GC +P C++I + YS+DDD E PK
Sbjct: 601 CPKCEKGYMHLSVSRYGV--FLGCTNYPVCRFIVNS-YSTDDDTEY-----------PKQ 646
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALV--LLQY 403
+ + I L GPYGIY++ Y K +S+P KDVD +++++ +
Sbjct: 647 IA------QDISLHKGPYGIYLK-------YKGKNSSIP--KDVDPVSIDEEFAHKIASL 691
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
P LGKHP DG + + + G + + K + + ++ +E+TL+KA++ +
Sbjct: 692 PKILGKHPADGKEIKMGLGPYGLYLFWNAKYYNL-QFSQMDEMTLDKAVQFI 742
[177][TOP]
>UniRef100_Q2S3I6 DNA topoisomerase n=1 Tax=Salinibacter ruber DSM 13855
RepID=Q2S3I6_SALRD
Length = 862
Score = 77.8 bits (190), Expect = 6e-13
Identities = 48/164 (29%), Positives = 79/164 (48%)
Frame = +2
Query: 68 GTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSG 247
G + +V ++GA D I L D +E ++LG +
Sbjct: 625 GEYVVRVGKYGAYVEGEMDGATVTASIPDDLAPGDTTEERLREILEEANRGDRVLGIHPE 684
Query: 248 SNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHP 427
++ +LLKSGPYG YVQLG+D + PKR S+P + + + + + ++ P TLG+HP
Sbjct: 685 ASLPVLLKSGPYGPYVQLGDDEEEDDPKRVSLPPDVEPEDVDFDLGVRIVDLPRTLGEHP 744
Query: 428 KDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
G + + + G +R+ A + K E+ LE+ALEL+
Sbjct: 745 DTGKEIEADIGRYGPYVRHEGTFASLQKGDDVLEVGLERALELI 788
[178][TOP]
>UniRef100_C8NB53 DNA topoisomerase 1 (DNA topoisomerase I) n=1 Tax=Cardiobacterium
hominis ATCC 15826 RepID=C8NB53_9GAMM
Length = 790
Score = 77.8 bits (190), Expect = 6e-13
Identities = 42/134 (31%), Positives = 78/134 (58%)
Frame = +2
Query: 161 YSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRAS 340
+S D+++D P++ + + + LG + S + + ++ G +G +VQ+G P+ AS
Sbjct: 557 FSHQLDEKKDIPREE--VMQARELGTDPKSGKPVSVRFGRFGPFVQIGSKDDEEKPQFAS 614
Query: 341 VPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTK 520
+P +++D ITLE+AL L + P +G +DG ++ + + G +RY + +PK
Sbjct: 615 IPSDRNMDEITLEEALELFKLPRVVGHSEEDGE-IVTSIGRFGPYVRYGKRYVSLPKEED 673
Query: 521 PNEITLEKALELLS 562
P ITLE+ALEL++
Sbjct: 674 PLTITLERALELIA 687
[179][TOP]
>UniRef100_A9HBK4 DNA topoisomerase n=1 Tax=Roseobacter litoralis Och 149
RepID=A9HBK4_9RHOB
Length = 878
Score = 77.8 bits (190), Expect = 6e-13
Identities = 53/150 (35%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C G L + +R G G FIGC +P C+Y ++DD P E
Sbjct: 594 RLCPNCGAGRLSMRTARSG-GAFIGCSNYPECRYTRAFGPPGEEDDSGIPP-------EG 645
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
KLLG +KI G +G YVQ GE D K P R S+P + + L AL L
Sbjct: 646 KLLG--EDGEDKIYAFKGRFGPYVQRGEVTEDNK--KPPRQSIPKDWPPEDVDLPQALKL 701
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRY 484
L P +G HP+DG V + + G I++
Sbjct: 702 LSLPREIGPHPEDGITVWANIGRYGPYIKH 731
[180][TOP]
>UniRef100_A5PDV3 DNA topoisomerase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDV3_9SPHN
Length = 853
Score = 77.8 bits (190), Expect = 6e-13
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 7/192 (3%)
Frame = +2
Query: 8 ADYLFGSLPDKS--RVCPSC-TEGT----LIFKVSRFGAGYFIGCDQHPRCKYIAKTLYS 166
+DYLF D R CP C TEG L + R+GA F+ C +P CK+ +
Sbjct: 572 SDYLFPERADGKDPRHCPLCETEGREGGRLALRGGRYGA--FVACANYPECKFTRQFAKP 629
Query: 167 SDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVP 346
D D+ + ++G + + + K+G +G Y+QLGE G KRAS+P
Sbjct: 630 GSDGDDG---------ADDGVMGKDPETGLPVERKTGRFGPYIQLGE---GKDAKRASIP 677
Query: 347 HVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPN 526
KD+D LE AL LL P +G HP+ G + + + G +R+ K A +
Sbjct: 678 --KDLDDFDLEWALKLLSLPRIVGAHPETGKEIEANIGRYGPYLRHDGKYAKLTSTRDVF 735
Query: 527 EITLEKALELLS 562
E + A+ LL+
Sbjct: 736 ETGMNAAVSLLA 747
[181][TOP]
>UniRef100_Q98LX0 DNA topoisomerase n=1 Tax=Mesorhizobium loti RepID=Q98LX0_RHILO
Length = 873
Score = 77.4 bits (189), Expect = 7e-13
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 2/145 (1%)
Frame = +2
Query: 2 KFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 175
+ A +F + D S R+CP C G L K+ +FGA F+GC +P C + + +++
Sbjct: 587 ELAPLVFPAREDGSNPRICPKCGTGNLSLKLGKFGA--FVGCSNYPECSFTRQLGDAANP 644
Query: 176 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 355
+ E T K+LG + + E+I L+SG +G Y+Q G+ G KR+S+P
Sbjct: 645 NGENGGGDDGT-----KVLGKDPYTAEEITLRSGRFGPYLQRGD---GKDAKRSSLPKGW 696
Query: 356 DVDSITLEDALVLLQYPLTLGKHPK 430
++I E AL LL P +GKHP+
Sbjct: 697 TPETIDHEKALALLALPRDIGKHPE 721
[182][TOP]
>UniRef100_D0CWX9 DNA topoisomerase I n=1 Tax=Silicibacter lacuscaerulensis ITI-1157
RepID=D0CWX9_9RHOB
Length = 871
Score = 77.4 bits (189), Expect = 7e-13
Identities = 62/180 (34%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP C G L K SR G F+GC +P C Y + +E
Sbjct: 618 RICPKCGVGRLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEGEE------------- 662
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVKDVDSITLEDALVLLQ 400
+LLG + ++I LKSG +G YVQ GE + P RAS+P + D + LE AL LL
Sbjct: 663 RLLGVDG--EDEIWLKSGRFGPYVQRGEATPENKKPPRASLPKGWNKDDMDLEKALTLLS 720
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYR--DKIALVPKNTK-PN---EITLEKALELLS 562
P +G+HP +G + + G I ++ D+ V N K PN EI + +A+ELL+
Sbjct: 721 LPREIGEHP-EGGMISANFGRFGPYIMHQLPDEAKPVYANLKDPNDVFEIGMNRAVELLA 779
[183][TOP]
>UniRef100_B9NPP1 DNA topoisomerase n=1 Tax=Rhodobacteraceae bacterium KLH11
RepID=B9NPP1_9RHOB
Length = 873
Score = 77.4 bits (189), Expect = 7e-13
Identities = 63/179 (35%), Positives = 86/179 (48%), Gaps = 6/179 (3%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP C G L K SR G F+GC +P C Y + DE
Sbjct: 616 RICPKCGMGQLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEGDE------------- 660
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVKDVDSITLEDALVLLQ 400
+LLG ++G ++I LKSG +G YVQ GE + P RAS+P D + L AL LL
Sbjct: 661 RLLGEDAG--DEIWLKSGRFGPYVQRGEPTPENKKPPRASLPRGWSKDDMDLGKALTLLS 718
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSI-RYRDKIALVPKNTK-PN---EITLEKALELLS 562
P +G+HP+ G G Y + + D+ V N K PN EI + +A+ELL+
Sbjct: 719 LPRQIGEHPEGGMISSNFGRFGPYLMHQLADEAKPVYANLKDPNDVFEIGMNRAVELLA 777
[184][TOP]
>UniRef100_A6FU07 DNA topoisomerase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FU07_9RHOB
Length = 839
Score = 77.4 bits (189), Expect = 7e-13
Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP C EG+L K SR G F+GC ++P C++ + +
Sbjct: 593 RSCPLCGEGSLHLKTSRTGG--FVGCSRYPECRFTRPIGGEGAEGGD------------- 637
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
++LG + G ++I L+SG +G YVQ GE + P RAS+P D + LE AL+LL
Sbjct: 638 RVLGEDQG--DEISLRSGRFGPYVQRGEVTEENKKPPRASLPKGWSPDDMDLEKALMLLN 695
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+DG V + + G +++ A + I + +A+E L+
Sbjct: 696 LPREIGPHPEDGEMVEAGIGRYGPFVKHGKLYANLKDPDDVFTIGMNRAVEELA 749
[185][TOP]
>UniRef100_Q167W6 DNA topoisomerase n=1 Tax=Roseobacter denitrificans OCh 114
RepID=Q167W6_ROSDO
Length = 878
Score = 77.0 bits (188), Expect = 9e-13
Identities = 52/150 (34%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C G L + +R G G FIGC +P C+Y ++DD P E
Sbjct: 594 RLCPNCGAGRLSMRTARSG-GAFIGCSNYPECRYTRAFGPPGEEDDSGIPP-------EG 645
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
KLLG ++KI G +G YVQ GE D K P R S+P + + L AL L
Sbjct: 646 KLLG--EDGDDKIYAFKGRFGPYVQRGEVTEDNK--KPPRQSIPKDWPPEDVDLPQALKL 701
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRY 484
L P +G HP+DG V + + G +++
Sbjct: 702 LSLPREIGPHPEDGIMVWANIGRYGPYLKH 731
[186][TOP]
>UniRef100_Q2GKB4 DNA topoisomerase n=1 Tax=Anaplasma phagocytophilum HZ
RepID=Q2GKB4_ANAPZ
Length = 811
Score = 76.6 bits (187), Expect = 1e-12
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Frame = +2
Query: 11 DYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 184
+Y F S+ +S RVCP C G L+ + + A F+GC+++P C+Y D
Sbjct: 585 NYAFSSVDGESISRVCPQCGSGELMLNIGKTSA--FLGCNRYPECRYTRGI-----GGDG 637
Query: 185 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 364
+P + + ++LG + + E+I LK GPYG Y+QLG + KR S+ K
Sbjct: 638 SASPADDAS----RILGIDEETQEEIFLKRGPYGEYLQLGN-----STKRVSL--TKSAG 686
Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEK 544
IT++ A +L PL LG +P + L + + G + Y + I+ ++
Sbjct: 687 EITVDLAKKMLSLPLVLGCYPDTDKEIKLGIGRFGPYLFYNGVYFSIKDREDYINISHQE 746
Query: 545 ALELL 559
A+E++
Sbjct: 747 AVEII 751
[187][TOP]
>UniRef100_Q4C5N4 DNA topoisomerase n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C5N4_CROWT
Length = 880
Score = 76.6 bits (187), Expect = 1e-12
Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Frame = +2
Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262
K+ +FG + ++ I L SD D E+ E P+ LG + + E I
Sbjct: 611 KIGKFGPYVEVLQEEEKITASIPTDLTPSDLDPEQINKLLKQKTEGPQKLGLHPENGEAI 670
Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439
+ G YG YVQLGE + PKRAS+P +VD +TL+ A+ LL P LG HP+ G
Sbjct: 671 YILIGSYGPYVQLGEASEENKKPKRASLPKGTNVDDVTLDMAVGLLALPRLLGTHPETGA 730
Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562
+ + + G Y + + K ++ K + ITLE+ALELL+
Sbjct: 731 KIKASLGRFGPYVVHDQGKEGKDYRSLKKEDDVLTITLERALELLA 776
[188][TOP]
>UniRef100_A3V7A4 DNA topoisomerase n=1 Tax=Loktanella vestfoldensis SKA53
RepID=A3V7A4_9RHOB
Length = 870
Score = 76.6 bits (187), Expect = 1e-12
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C G L + +R G G FIGC +P C+Y + D + E ++ +
Sbjct: 592 RLCPNCGAGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDPEAE----KSAIPPDG 644
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT-PKRASVPHVKDVDSITLEDALVLLQ 400
KLLG ++G ++I + G +G YVQ G + P R VP + + LE AL LLQ
Sbjct: 645 KLLGHDAG--DEIRIFKGRFGPYVQRGATSEANPKPDRTGVPEGWPAEEVDLEQALRLLQ 702
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRY 484
P +G HP+DG V + + G +++
Sbjct: 703 LPRQIGLHPEDGIMVWANIGRYGPYLKH 730
[189][TOP]
>UniRef100_A3JR62 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium HTCC2150
RepID=A3JR62_9RHOB
Length = 870
Score = 76.6 bits (187), Expect = 1e-12
Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 1/174 (0%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
+ CP C EG L K SR G F+GC +P C+Y D D D
Sbjct: 593 KTCPLCGEGKLHLKSSRSGG--FVGCGNYPECRYTRPI--GGDAADGGD----------- 637
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
++LG ++G ++I L++G +G Y+Q G+ + P RAS+P D++ LE AL+LL
Sbjct: 638 RVLGEDAG--DEISLRTGRFGPYIQRGQVTEEVKKPLRASLPKGWAPDNMDLEKALMLLS 695
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
P +G HP+D PV + + G +++ A + + + + +A+EL++
Sbjct: 696 LPRLIGPHPEDQEPVEAGLGRYGPYVKHGRTFASLSDAEELFTVGMNRAVELIA 749
[190][TOP]
>UniRef100_UPI0000E87F44 DNA topoisomerase I n=1 Tax=Methylophilales bacterium HTCC2181
RepID=UPI0000E87F44
Length = 828
Score = 76.3 bits (186), Expect = 2e-12
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGA-GYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPK 226
CP C + L S+ G G F+ C +P C + + D PQ EPK
Sbjct: 590 CPKCNKPLL----SKLGKRGNFVACSGYPDCDFTRSS--------NGDLPQ------EPK 631
Query: 227 LLGFNSGSNEKILLKSGPYGIYVQLG--EDRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
++G + + + I L GPYG Y+QLG ED PKR ++P + + A L+
Sbjct: 632 IVGEDELTKKSIYLLIGPYGPYLQLGIPEDGDKVKPKRTTIPPEIALADLDETVAKKLIS 691
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
P LG+HP+ G ++ + + G + + K +PK +I+ E A++LL
Sbjct: 692 LPRELGEHPETGKLILANIGRFGPYVNHNGKFKSIPKTENVFDISFETAVDLL 744
[191][TOP]
>UniRef100_A6DUX6 DNA topoisomerase n=1 Tax=Roseovarius sp. TM1035 RepID=A6DUX6_9RHOB
Length = 901
Score = 76.3 bits (186), Expect = 2e-12
Identities = 62/180 (34%), Positives = 89/180 (49%), Gaps = 7/180 (3%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP C G L K SR G F+GC +P C+Y D + D
Sbjct: 620 RQCPLCGTGQLHLKTSRSGG--FVGCGNYPECRYTRPI--GGDAGENGD----------- 664
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
++LG + NE I L+SG +G YVQ GE + P RAS+P +++TLE AL LL
Sbjct: 665 RILGQDEAGNE-ISLRSGRFGPYVQRGEATEENKKPDRASLPKGWTAEAMTLEKALTLLS 723
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYR--DKIALVPKNTK-PN---EITLEKALELLS 562
P +G+HP +G + + G + ++ D+ V N K PN EI + +A+ELL+
Sbjct: 724 LPRDVGQHP-EGGMISANFGRFGPYLMHQLPDEAKPVYANLKDPNDVFEIGMNRAVELLA 782
[192][TOP]
>UniRef100_A4EQ09 DNA topoisomerase n=1 Tax=Roseobacter sp. SK209-2-6
RepID=A4EQ09_9RHOB
Length = 894
Score = 76.3 bits (186), Expect = 2e-12
Identities = 58/176 (32%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
RVCP C G L K SR G F+GC +P C Y + +E
Sbjct: 613 RVCPKCGAGQLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEGEE------------- 657
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVKD----VDSITLEDAL 388
KLLG S ++I LK G YG YVQ GE + PKR+S+P + + TLE AL
Sbjct: 658 KLLG--SDGEDEIWLKDGRYGPYVQRGEATPENKKPKRSSLPQTRHGGWPKEETTLERAL 715
Query: 389 VLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556
LL P +G HP+ G + + + G I ++ +P+ KP + L++ E+
Sbjct: 716 QLLSLPRNVGDHPEGGR-ISANLGRFGPYIMHK-----LPEAEKPTYVNLKQWHEM 765
[193][TOP]
>UniRef100_B6B192 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium HTCC2083
RepID=B6B192_9RHOB
Length = 867
Score = 75.9 bits (185), Expect = 2e-12
Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
RVCP C G L K SR G F+GC +P C Y D +E+
Sbjct: 593 RVCPKCGLGNLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGADGEEQ------------ 638
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK----DVDSITLEDAL 388
LLG + G ++I LKSG +G YVQ GE + PKR S+P + D TLE A+
Sbjct: 639 -LLGTDEG--DEIWLKSGRFGPYVQRGEVTPENKKPKRTSLPQARHGGWDKADTTLEKAI 695
Query: 389 VLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556
LL P +G+HP+ G + G + K+ K T N T ++ E+
Sbjct: 696 KLLSLPRGIGEHPEGGR---ISANLGRFGPYIMHKLPNAEKPTYVNVKTWDEMFEV 748
[194][TOP]
>UniRef100_A9E167 DNA topoisomerase n=1 Tax=Oceanibulbus indolifex HEL-45
RepID=A9E167_9RHOB
Length = 885
Score = 75.9 bits (185), Expect = 2e-12
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 3/162 (1%)
Frame = +2
Query: 14 YLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEE 187
+LF D S R+CP+C G L + +R G G FIGC +P C+Y + D + E
Sbjct: 579 HLFPPTEDGSDPRLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDPEAE 635
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364
+ + KLLG + G ++I + G +G YVQ G + P R S+P +
Sbjct: 636 ----ASAIPPDGKLLGEDQG--DEIRVFKGRFGPYVQRGPVTEENKKPPRQSIPKDWPAE 689
Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490
+TLE ++LL P +G HP+DG V + + G I++ +
Sbjct: 690 EVTLEQGVMLLSLPRQIGPHPEDGVMVWSNIGRYGPYIKHAE 731
[195][TOP]
>UniRef100_B4B237 DNA topoisomerase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B237_9CHRO
Length = 879
Score = 75.1 bits (183), Expect = 4e-12
Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Frame = +2
Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262
K+ RFG + + I L +D D E+ E P+ +GF+ + E I
Sbjct: 611 KIGRFGPYVEVQNGEEVVTASIPTELTPADLDPEKVELLLKQKTEGPEKVGFHPETGEPI 670
Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439
+ G YG YVQLGE + PKR S+P + +TLE A+ LL P TLG HP+ G
Sbjct: 671 YMLIGTYGPYVQLGEVTEENKKPKRGSLPKGVKPEDVTLEMAVNLLSLPRTLGSHPETGA 730
Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562
+ + + + G Y + + K ++ K ++ ITLE+ALELLS
Sbjct: 731 KIQVNLGRFGPYVVHDQGKEGKDYRSLKASDDLFTITLERALELLS 776
Score = 57.0 bits (136), Expect = 1e-06
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 17/131 (12%)
Frame = +2
Query: 221 PKLLGFNSGSNEKILLKSGPYGIYV--QLGEDRKGYTPKRASVPHVKDVDSITLEDALVL 394
P+ LG + + KI + G +G YV G++ K Y +AS D+ +ITLE AL L
Sbjct: 719 PRTLGSHPETGAKIQVNLGRFGPYVVHDQGKEGKDYRSLKAS----DDLFTITLERALEL 774
Query: 395 LQYPLT---------------LGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNE 529
L P LG HPKD PV + G +++ A +P+ P+
Sbjct: 775 LSEPKKGRGGGRSTTKKPLKELGLHPKDNEPVNIYDGPYGAYVKHGKTNAKMPEGETPDT 834
Query: 530 ITLEKALELLS 562
+TLEKALE L+
Sbjct: 835 LTLEKALEALA 845
[196][TOP]
>UniRef100_A3SYM3 DNA topoisomerase n=1 Tax=Sulfitobacter sp. NAS-14.1
RepID=A3SYM3_9RHOB
Length = 888
Score = 75.1 bits (183), Expect = 4e-12
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C G L + +R G G FIGC +P C+Y + D + E + +
Sbjct: 592 RLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDPEAE----ASAIPPDG 644
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
KLLG + G ++I + G +G YVQ G + P R SVP + + LE A++LL
Sbjct: 645 KLLGEDMG--DEIRVFKGRFGPYVQRGPVTEENKKPPRQSVPKDWPAEELELERAVMLLS 702
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490
P +G HP+DG V + + G I++ D
Sbjct: 703 LPREIGPHPEDGVMVWANIGRYGPYIKHAD 732
[197][TOP]
>UniRef100_A3SF48 DNA topoisomerase n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SF48_9RHOB
Length = 888
Score = 75.1 bits (183), Expect = 4e-12
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C G L + +R G G FIGC +P C+Y + D + E + +
Sbjct: 592 RLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDPEAE----ASAIPPDG 644
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
KLLG + G ++I + G +G YVQ G + P R SVP + + LE A++LL
Sbjct: 645 KLLGEDMG--DEIRVFKGRFGPYVQRGPVTEENKKPPRQSVPKDWPAEELELERAVMLLS 702
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490
P +G HP+DG V + + G I++ D
Sbjct: 703 LPREIGPHPEDGVMVWANIGRYGPYIKHAD 732
[198][TOP]
>UniRef100_C1E9E3 DNA topoisomerase n=1 Tax=Micromonas sp. RCC299 RepID=C1E9E3_9CHLO
Length = 1227
Score = 75.1 bits (183), Expect = 4e-12
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Frame = +2
Query: 41 SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEE 220
+R CP C G L K+SR G FIGC +P C + + + +D + N IE
Sbjct: 818 TRRCPGCGTGRLGLKLSRTGG--FIGCSNYPSCGHTRQLV----NDGDGAVGGGNFPIE- 870
Query: 221 PKLLGFNSGSNEKILLKSGPYGIYVQLG-----EDRKGYTPKRASVPHV----KDVDSIT 373
LG + S + +++GPYG Y++L +D K P+R + ++ +DVD
Sbjct: 871 ---LGTDPESGGDVAIQNGPYGPYIELQMPSSPDDSKKTKPQRFGLKNIGLKPEDVD--- 924
Query: 374 LEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRY 484
++ A+ LL+YP+ LG HP+DG V++ + G+ + +
Sbjct: 925 MDLAMTLLRYPMVLGPHPEDGKDVVMNMGPFGWYVSH 961
[199][TOP]
>UniRef100_B7RLF8 DNA topoisomerase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RLF8_9RHOB
Length = 881
Score = 74.7 bits (182), Expect = 5e-12
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C G L + +R G G FIGC +P C+Y + D + E + +
Sbjct: 592 RLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDPEAE----ASAIPPDG 644
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
KLLG + G ++I + G +G YVQ G + P R SVP + + LE AL+LL
Sbjct: 645 KLLGEDQG--DEIRVFKGRFGPYVQRGPVTEENKKPPRQSVPKDWPAEELDLERALMLLS 702
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRY 484
P +G HP+DG V + + G I++
Sbjct: 703 LPREIGPHPEDGIMVWANIGRYGPYIKH 730
[200][TOP]
>UniRef100_B9JVI0 DNA topoisomerase n=1 Tax=Agrobacterium vitis S4 RepID=B9JVI0_AGRVS
Length = 904
Score = 73.9 bits (180), Expect = 8e-12
Identities = 45/131 (34%), Positives = 67/131 (51%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+C C G L K+ ++GA F+GC +P C + + S+D E + EP
Sbjct: 606 RICQVCGTGNLSLKLGKYGA--FVGCSNYPECNFTRQL--SADGGTEAEAVGN-----EP 656
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
K LG + + E+I L+SG +G YVQ G+ G KR+S+P + + AL LL
Sbjct: 657 KALGEDPTTGEQITLRSGRFGPYVQRGD---GKEAKRSSLPKGWSPTDVDFDKALSLLSL 713
Query: 404 PLTLGKHPKDG 436
P +G HP+ G
Sbjct: 714 PREVGLHPETG 724
[201][TOP]
>UniRef100_A3K045 DNA topoisomerase n=1 Tax=Sagittula stellata E-37 RepID=A3K045_9RHOB
Length = 889
Score = 73.9 bits (180), Expect = 8e-12
Identities = 59/179 (32%), Positives = 83/179 (46%), Gaps = 8/179 (4%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP C +G L K SR G F+GC +P C Y + +E
Sbjct: 620 RICPKCGQGRLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEGEE------------- 664
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVK-------DVDSITLE 379
KLLG + G ++I LK+G +G YVQ GE + P RAS+P D +TLE
Sbjct: 665 KLLGEDQG--DEIWLKAGRFGPYVQRGEPTPENKKPPRASLPKKGGAYLPGWDPADMTLE 722
Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556
AL LL P +G HP DG V + + G I ++ +P KP + L++ E+
Sbjct: 723 KALTLLTMPREVGMHP-DGGVVSANLGRFGPYIMHQ-----LPDEEKPVYVNLKEFQEV 775
[202][TOP]
>UniRef100_A8LHT2 DNA topoisomerase n=1 Tax=Dinoroseobacter shibae DFL 12
RepID=A8LHT2_DINSH
Length = 900
Score = 73.6 bits (179), Expect = 1e-11
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C G L + +R G G FIGC +P C+Y + ++ P E
Sbjct: 632 RLCPNCEIGQLSMRTARSG-GAFIGCSNYPECRY-TRPFGPPGMEEASGIPP------EG 683
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
KLLG + G ++I + G +G YVQ G + P R S+P + + L+ A++LL
Sbjct: 684 KLLGEDGG--DEIRVFKGRFGPYVQRGAVTEENKKPPRQSIPKSWVPEELELDKAVMLLS 741
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490
P +G HP DG PV + + G +++ D
Sbjct: 742 LPRQIGLHPDDGVPVWANIGRYGPYLKHAD 771
[203][TOP]
>UniRef100_Q0FRU2 DNA topoisomerase n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FRU2_9RHOB
Length = 906
Score = 73.6 bits (179), Expect = 1e-11
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 8/179 (4%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP C +G L K SR G F+GC +P C Y + +E
Sbjct: 621 RICPKCGQGRLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEGEE------------- 665
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVKD-------VDSITLE 379
K+LG + ++I LK+G +G YVQ GE + P RAS+P + D +TLE
Sbjct: 666 KMLGLDG--EDEIWLKAGRFGPYVQRGEPTPENKKPPRASLPKARGNFLPGWAPDDMTLE 723
Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556
AL LL P +G HP DG + + + G I ++ P KP + L++ E+
Sbjct: 724 KALTLLTLPREIGMHP-DGGVIKSNLGRFGPYIMHQ-----APDEEKPVYVNLKEFQEV 776
[204][TOP]
>UniRef100_B5W1H4 DNA topoisomerase n=1 Tax=Arthrospira maxima CS-328
RepID=B5W1H4_SPIMA
Length = 911
Score = 73.6 bits (179), Expect = 1e-11
Identities = 46/121 (38%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Frame = +2
Query: 215 EEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRK-GYTPKRASVPHVKDVDSITLEDALV 391
E P+ LG + + E I + GPYG YVQLGE+ + PKR S+P + D++TL+ A+
Sbjct: 662 EGPEKLGVHPEAGEPIFMLIGPYGPYVQLGEESETNKKPKRVSLPKGLEKDAVTLDVAVS 721
Query: 392 LLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNE----ITLEKALELL 559
LL P LG+HP+ G V + + G + + K A ++ K + IT E+ALELL
Sbjct: 722 LLSLPRLLGQHPETGAKVKAAIGRFGPYVVHESKEAKDYRSIKAPDDVLTITFERALELL 781
Query: 560 S 562
+
Sbjct: 782 A 782
[205][TOP]
>UniRef100_A3WD22 DNA topoisomerase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WD22_9SPHN
Length = 858
Score = 73.6 bits (179), Expect = 1e-11
Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 7/192 (3%)
Frame = +2
Query: 8 ADYLFGSLPD--KSRVCPSC-----TEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYS 166
+DYLF D +R CP C + G L + R GA FI C +P CK+
Sbjct: 571 SDYLFPPREDGKDARYCPLCDAEGRSGGRLALRGGRNGA--FIACANYPECKFTRSFGPP 628
Query: 167 SDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVP 346
+D DE + ++G + + I KSG +G YV++ D K KRAS+P
Sbjct: 629 REDGDEA---------VQDGVMGQHPETGADIHRKSGRFGPYVEMEVDEK---KKRASIP 676
Query: 347 HVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPN 526
KDVD LE A+ LL+ P +G HP+ G + + + G +R+ K A +
Sbjct: 677 --KDVDDFDLEWAIKLLELPRIIGAHPETGKEIEAAIGRYGPYLRHDGKYANLKTTQDVF 734
Query: 527 EITLEKALELLS 562
+ + A+ LL+
Sbjct: 735 DTGMNAAVTLLA 746
[206][TOP]
>UniRef100_A0YII1 DNA topoisomerase n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YII1_9CYAN
Length = 893
Score = 73.6 bits (179), Expect = 1e-11
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Frame = +2
Query: 215 EEPKLLGFNSGSNEKILLKSGPYGIYVQLGED-RKGYTPKRASVPHVKDVDSITLEDALV 391
E P+ LG + + E IL+ GPYG YVQLGE+ + PKR S+P + DS+TL+ A+
Sbjct: 662 EGPEKLGLHPETGEAILMLIGPYGPYVQLGEESEENKKPKRVSLPKGVEKDSVTLDMAVG 721
Query: 392 LLQYPLTLGKHPKDGHPVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALEL 556
LL P LG HP+ G V + + G Y + + K ++ K + ITLE+ALE+
Sbjct: 722 LLSLPRLLGVHPETGAKVKAAIGRFGPYVVHDQGKEGKDYRSIKAPDDVLAITLERALEM 781
Query: 557 LS 562
L+
Sbjct: 782 LA 783
Score = 57.8 bits (138), Expect = 6e-07
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 13/190 (6%)
Frame = +2
Query: 32 PDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTT 211
P+K + P E L+ + +G +G + K +L + D
Sbjct: 664 PEKLGLHPETGEAILML-IGPYGPYVQLGEESEENKKPKRVSLPKGVEKDSVTLDMAVGL 722
Query: 212 IEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALV 391
+ P+LLG + + K+ G +G YV + ++G + P DV +ITLE AL
Sbjct: 723 LSLPRLLGVHPETGAKVKAAIGRFGPYVVHDQGKEGKDYRSIKAPD--DVLAITLERALE 780
Query: 392 LLQYPLT-------------LGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEI 532
+L P LG HP+D PV + G +++ A +PK ++
Sbjct: 781 MLAQPKAGRGGRRSATPLRELGAHPEDSEPVNVYNGPYGLYVKHGKTNASIPKEVTVEDV 840
Query: 533 TLEKALELLS 562
TLEKALE L+
Sbjct: 841 TLEKALEWLA 850
[207][TOP]
>UniRef100_D0D7V2 DNA topoisomerase I n=1 Tax=Citreicella sp. SE45 RepID=D0D7V2_9RHOB
Length = 918
Score = 73.2 bits (178), Expect = 1e-11
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 8/179 (4%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP C +G L K SR G F+GC +P C Y D +E
Sbjct: 630 RICPKCGQGRLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGADGEE------------- 674
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVKDV-------DSITLE 379
+LLG + G +++ LK+G +G YVQ GE + P RAS+P D +TLE
Sbjct: 675 RLLGSHEG--DEVWLKAGRFGPYVQRGEPTPENKKPPRASLPKKGGAFLPGWSPDDMTLE 732
Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556
A+ LL P +G HP+ G V + + G I ++ +P KP + L++ E+
Sbjct: 733 KAVTLLTLPRVVGMHPEGGE-VKSNLGRFGPFIMHQ-----LPDEEKPVYVNLKEFQEV 785
[208][TOP]
>UniRef100_Q28MI5 DNA topoisomerase n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MI5_JANSC
Length = 907
Score = 72.8 bits (177), Expect = 2e-11
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C G L + +R G G FIGC +P C+Y + D + E + +
Sbjct: 630 RLCPNCGVGRLSMRTARAG-GAFIGCSAYPECRYTRP--FGPPDPEAE----ASAIPPDG 682
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
KLLG + G ++I + G +G YVQ G + P R S+P + + LE AL+LL
Sbjct: 683 KLLGEDQG--DEIRIFKGRFGPYVQRGAMTEENKKPPRQSIPKDWTPEELDLERALMLLS 740
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYRD 490
P +G HP+DG V + + G +++ +
Sbjct: 741 LPRQIGPHPEDGIMVWSNIGRYGPYLKHAE 770
[209][TOP]
>UniRef100_B1WVJ8 DNA topoisomerase n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WVJ8_CYAA5
Length = 881
Score = 72.8 bits (177), Expect = 2e-11
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
Frame = +2
Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262
K+ +FG + + I L SD + E+ E P+ LG + + E I
Sbjct: 611 KIGKFGPYVEVLDGEEKITASIPADLTPSDLNPEQVNKLLKQKTEGPEKLGLHPETGEPI 670
Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439
+ G YG YVQLGE + PKRAS+P V+ +TLE A+ LL P LG HP+ G
Sbjct: 671 YVLIGSYGPYVQLGEATEENKKPKRASLPKGTSVEDVTLEMAVGLLALPRLLGTHPETGA 730
Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562
+ + + G Y + + K ++ K + +TLE+ALELL+
Sbjct: 731 KIKASIGRFGPYVVHDQGKSGKDYRSLKKEDDVLTVTLERALELLA 776
[210][TOP]
>UniRef100_A3VFW8 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium HTCC2654
RepID=A3VFW8_9RHOB
Length = 846
Score = 72.8 bits (177), Expect = 2e-11
Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP C G L K SR G F+GC +P C+Y ++ + D
Sbjct: 597 RKCPLCGTGDLHLKTSRSGG--FVGCSNYPECRYTRPI--GGGEETQGD----------- 641
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
++LG + + E+I L+SG +G YVQ GE + P RAS+P D + LE AL LL
Sbjct: 642 RILGEDE-NGEEISLRSGRFGPYVQRGEVSEENKKPDRASLPKGWSADDMDLEKALTLLS 700
Query: 401 YPLTLGKHPKDG 436
P +G+HP+ G
Sbjct: 701 LPRLIGQHPEGG 712
[211][TOP]
>UniRef100_Q11AC4 DNA topoisomerase n=1 Tax=Trichodesmium erythraeum IMS101
RepID=Q11AC4_TRIEI
Length = 874
Score = 72.4 bits (176), Expect = 2e-11
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Frame = +2
Query: 146 IAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT 325
I + L SD D E+ E P+ LG + ++ I + +G YG YVQLG+D +G
Sbjct: 638 IPEDLTPSDLDPEQIEKLLKQKTEGPQELGIHPEEDKSIYIMTGRYGPYVQLGDDSEGSK 697
Query: 326 --PKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRY----- 484
PKRAS+P +++ +TL+ A+ LL P TLG HP+ G + + + G I +
Sbjct: 698 RKPKRASLPKGVNMEDVTLDLAVGLLSLPRTLGTHPETGCKIQANLGRFGPYIVHDQGKE 757
Query: 485 --RDKIALVPKNTKPNEITLEKALELLS 562
+D +L K+ ITLE+ALELL+
Sbjct: 758 DGKDYRSLKVKDDVLT-ITLERALELLA 784
Score = 54.7 bits (130), Expect = 5e-06
Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 17/130 (13%)
Frame = +2
Query: 221 PKLLGFNSGSNEKI---LLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALV 391
P+ LG + + KI L + GPY ++ Q ED K Y + DV +ITLE AL
Sbjct: 726 PRTLGTHPETGCKIQANLGRFGPYIVHDQGKEDGKDYRSLKVK----DDVLTITLERALE 781
Query: 392 LLQYPLT--------------LGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNE 529
LL P LGKHP+DG V + + G +++ A +PK+ +
Sbjct: 782 LLAQPKRSRRGSAKAVLPLKDLGKHPEDGETVGVYDGRYGLYVKHGKVNASLPKDMSVED 841
Query: 530 ITLEKALELL 559
+T EKALELL
Sbjct: 842 VTWEKALELL 851
[212][TOP]
>UniRef100_UPI0001BB471A DNA topoisomerase I n=1 Tax=alpha proteobacterium HIMB114
RepID=UPI0001BB471A
Length = 851
Score = 72.0 bits (175), Expect = 3e-11
Identities = 50/165 (30%), Positives = 77/165 (46%)
Frame = +2
Query: 68 GTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSG 247
G L KV RFGA FIGC +P CK+ Q + EPK +G +
Sbjct: 612 GDLSLKVGRFGA--FIGCSNYPECKFTRPL--------SRIKAAQEDFMSEPKEIG-ETD 660
Query: 248 SNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHP 427
+KI+LK G +G Y+Q+G D K K S+P + + +E A L P LGK+P
Sbjct: 661 EGKKIMLKKGRFGPYLQVGNDEKEM--KNFSIPKGISPNDVDIEKAKFLSGLPKVLGKYP 718
Query: 428 KDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
++ + L + G ++ +K A + I + KA+ L++
Sbjct: 719 ENNEDITLNNGRFGPYVKCANKSATLESPEDIFSIGINKAITLIA 763
[213][TOP]
>UniRef100_Q2GDH2 DNA topoisomerase n=1 Tax=Neorickettsia sennetsu str. Miyayama
RepID=Q2GDH2_NEOSM
Length = 827
Score = 72.0 bits (175), Expect = 3e-11
Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Frame = +2
Query: 50 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 229
CP C +G + VSR+G F+GC +P C++I + YS+D+D E PK
Sbjct: 601 CPKCEKGYMHLNVSRYGV--FLGCTDYPVCRFIVNS-YSTDNDTEY-----------PKQ 646
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALV--LLQY 403
+ + I L GPYGIY++ KG K +S+P KDVD +++++ +
Sbjct: 647 IA------QDISLHKGPYGIYLKC----KG---KNSSIP--KDVDPVSIDEEFAHKIASL 691
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
P LGKHP DG + + + G + + K + + ++ +E+TL++A++ +
Sbjct: 692 PKILGKHPIDGKEIKMGLGPYGLYLFWNAKYYNL-QFSQMDEMTLDQAVQFM 742
[214][TOP]
>UniRef100_Q11SL3 DNA topoisomerase n=1 Tax=Cytophaga hutchinsonii ATCC 33406
RepID=Q11SL3_CYTH3
Length = 841
Score = 72.0 bits (175), Expect = 3e-11
Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Frame = +2
Query: 206 TTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE--DRKGYTPKRASVPHVKDVDSITLE 379
+T+ ++LG + + E+I + G YG +VQ+GE + KG PK AS+ + +++ITLE
Sbjct: 589 STVNTSRILGTHPETGEQISTRLGRYGPFVQIGEADEEKGIKPKYASLRKGQLIENITLE 648
Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
+AL L + P LG + P+++ + + G IR+ K +PK P I+ E+ +EL+
Sbjct: 649 EALELFKLPRELGAF--EDKPMVVAIGRFGPYIRHNSKFVSIPKIDDPMTISAERGIELI 706
Query: 560 SGNNV 574
V
Sbjct: 707 LAKRV 711
[215][TOP]
>UniRef100_A3W2J5 DNA topoisomerase n=1 Tax=Roseovarius sp. 217 RepID=A3W2J5_9RHOB
Length = 906
Score = 72.0 bits (175), Expect = 3e-11
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 7/180 (3%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP C G L K SR G F+GC +P C+Y D ++ D
Sbjct: 619 RQCPLCGTGQLHLKTSRSGG--FVGCGNYPECRYTRPI--GGDAGEKGD----------- 663
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
++LG + E I L+SG +G YVQ GE + P RAS+P +++TLE AL LL
Sbjct: 664 RILGEDENGIE-ISLRSGRFGPYVQRGEATEENKKPDRASLPKGWSAEAMTLEKALTLLS 722
Query: 401 YPLTLGKHPKDGHPVILKVAKGGYSIRYR--DKIALVPKNTK-PN---EITLEKALELLS 562
P +G+HP +G + + G + ++ ++ V N K PN EI + +A+ELL+
Sbjct: 723 LPREVGQHP-EGGMISANFGRFGPYLMHQSPEEAKPVYANLKDPNDVFEIGMNRAVELLA 781
[216][TOP]
>UniRef100_B0CFN9 DNA topoisomerase n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0CFN9_ACAM1
Length = 892
Score = 70.9 bits (172), Expect = 7e-11
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 6/166 (3%)
Frame = +2
Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262
++ RFG ++ P + K + +D E+ +E P+ LGF+ E I
Sbjct: 611 RIGRFGPYIETEHEEKPVKASLPKDMTPADLTPEQIEQLLKQKLEGPEKLGFHPEKGEPI 670
Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439
+ G YG YVQLG+ + PKRAS+P ++S+TL+ A+ LL P LG+HP G
Sbjct: 671 YILLGAYGPYVQLGDVTEENKKPKRASLPKGVAMESVTLDMAVELLSLPRLLGQHPDTGC 730
Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562
V + + + G Y + + K ++ K + I+ E+ALELL+
Sbjct: 731 KVQVGLGRFGPYVVHDQGKEGKDYRSLKKEDNLFTISFERALELLA 776
[217][TOP]
>UniRef100_A3PBF8 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. MIT 9301
RepID=A3PBF8_PROM0
Length = 868
Score = 70.9 bits (172), Expect = 7e-11
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Frame = +2
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364
D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P D
Sbjct: 648 DIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNNDQNKAKPRRASLPKELKTD 707
Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNE----I 532
+TL++ALVLL P LG HP+ G + G Y +++ ++ K + +
Sbjct: 708 DLTLDEALVLLSLPRLLGVHPEGGVVEADRGRFGPYIKWIKNENESENRSLKKEDDVFTV 767
Query: 533 TLEKALELLS 562
+E+ALE+L+
Sbjct: 768 DIERALEILA 777
[218][TOP]
>UniRef100_B6B9B7 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium Y4I
RepID=B6B9B7_9RHOB
Length = 875
Score = 70.9 bits (172), Expect = 7e-11
Identities = 58/179 (32%), Positives = 85/179 (47%), Gaps = 8/179 (4%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R CP C +G L K SR G F+GC +P C Y + E
Sbjct: 613 RTCPKCGQGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEGYE------------- 657
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHV-KDV------DSITLE 379
++LG + G ++I LKSG +G YVQ GE + P R+S+P KD + ITLE
Sbjct: 658 RVLGEDDG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQGKDFLPGWGPNEITLE 715
Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556
AL LL P +G+HP DG + + + G I ++ +P KP + L++ L++
Sbjct: 716 QALTLLTLPRDIGQHP-DGGIIQSNLGRFGPYIAHQ-----LPDEEKPVYVNLKETLDV 768
[219][TOP]
>UniRef100_Q2JJ84 DNA topoisomerase n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13)
RepID=Q2JJ84_SYNJB
Length = 933
Score = 70.5 bits (171), Expect = 9e-11
Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +2
Query: 215 EEPKLLGFNSGSNEKI-LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDAL 388
E PK + F+ + E I ++ GPYG YVQLGE PKR S+P D +T E AL
Sbjct: 661 EGPKPIAFHPETQEPIYVIPQGPYGPYVQLGEVSEDNKKPKRTSLPKGLKPDQVTPEIAL 720
Query: 389 VLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
LL P TLG+HP+ G V + + G + +P + I+LE+ALELL+
Sbjct: 721 GLLSLPRTLGEHPESGKKVQAGIGRFGPYVVCDGDFRSLPADEDVLTISLERALELLA 778
Score = 53.9 bits (128), Expect = 9e-06
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 12/126 (9%)
Frame = +2
Query: 221 PKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
P+ LG + S +K+ G +G YV D + S+P +DV +I+LE AL LL
Sbjct: 726 PRTLGEHPESGKKVQAGIGRFGPYVVCDGDFR-------SLPADEDVLTISLERALELLA 778
Query: 401 YPLT------------LGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEK 544
P LG HP+DG PV L G +++ A +PK +TLE
Sbjct: 779 QPKKSRGRASAKPLRELGSHPEDGEPVNLHDGPYGLYVKHGKVNASLPKGIPAEAVTLEM 838
Query: 545 ALELLS 562
AL++L+
Sbjct: 839 ALQVLA 844
[220][TOP]
>UniRef100_B7KFB6 DNA topoisomerase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KFB6_CYAP7
Length = 872
Score = 70.1 bits (170), Expect = 1e-10
Identities = 60/186 (32%), Positives = 90/186 (48%), Gaps = 9/186 (4%)
Frame = +2
Query: 32 PDKSRVCP-SCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNT 208
P ++R P E T+ K+ R+G + + I L +D D ++
Sbjct: 595 PGEARAVPLENLEATV--KIGRYGPYIEVQNGEEVVTASIPADLTPADLDPQQVELLLKQ 652
Query: 209 TIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLE 379
E P+ +G + + E I + G YG YVQLGE D K PKRAS+P + +TLE
Sbjct: 653 KTEGPEKVGLHPETGEPIYMLIGSYGPYVQLGEVTEDNK--KPKRASLPKGTKPEDVTLE 710
Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEK 544
A+ LL P TLG HP G + + + + G Y + + K ++ K + ITLE+
Sbjct: 711 MAVDLLSLPRTLGNHPATGAKIQVNLGRFGPYVVHDQGKEGKDYRSLKAEDNLFTITLER 770
Query: 545 ALELLS 562
ALELL+
Sbjct: 771 ALELLA 776
[221][TOP]
>UniRef100_A8G3F0 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. MIT 9215
RepID=A8G3F0_PROM2
Length = 868
Score = 70.1 bits (170), Expect = 1e-10
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Frame = +2
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364
D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P D
Sbjct: 648 DIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNSDQDKAKPRRASLPKELKTD 707
Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKG--GYSIRY-----RDKIALVPKNTKP 523
+TL DAL+LL P LG HP+ G +++ +G G I++ + + K
Sbjct: 708 DLTLHDALILLSLPRLLGVHPEGG---VIEADRGRFGPYIKWIKNENESENRSLKKGDDV 764
Query: 524 NEITLEKALELLS 562
++ L++ALE+L+
Sbjct: 765 FKVDLKRALEILA 777
[222][TOP]
>UniRef100_Q0FCC1 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium HTCC2255
RepID=Q0FCC1_9RHOB
Length = 866
Score = 70.1 bits (170), Expect = 1e-10
Identities = 51/150 (34%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP+C G L + +R G G FIGC +P C+Y + +D P E
Sbjct: 593 RLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRY-TRAFGPPGAEDSSGIPP------EG 644
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVL 394
K LG + G ++I G +G YVQ GE D K P R S+P + LE AL L
Sbjct: 645 KNLGEDEG--DQIYAFKGRFGPYVQRGEVSDDNK--KPPRQSIPKDWPPADVDLEKALRL 700
Query: 395 LQYPLTLGKHPKDGHPVILKVAKGGYSIRY 484
L P +G HP+DG V + + G +++
Sbjct: 701 LSLPRQIGPHPEDGIMVWSNIGRYGPYLKH 730
[223][TOP]
>UniRef100_B9P0I6 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. MIT 9202
RepID=B9P0I6_PROMA
Length = 868
Score = 70.1 bits (170), Expect = 1e-10
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Frame = +2
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364
D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P D
Sbjct: 648 DIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNSDQDKAKPRRASLPKELKTD 707
Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKG--GYSIRY-----RDKIALVPKNTKP 523
+TL DAL+LL P LG HP+ G +++ +G G I++ + + K
Sbjct: 708 DLTLHDALILLSLPRLLGVHPEGG---VIEADRGRFGPYIKWIKNENESENRSLKKGDDV 764
Query: 524 NEITLEKALELLS 562
++ L++ALE+L+
Sbjct: 765 FKVDLKRALEILA 777
[224][TOP]
>UniRef100_A7ADP3 DNA topoisomerase n=1 Tax=Parabacteroides merdae ATCC 43184
RepID=A7ADP3_9PORP
Length = 781
Score = 70.1 bits (170), Expect = 1e-10
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Frame = +2
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLG----EDRKGYTPKRASVPHVKDVDSITLEDALVLL 397
LG + S + +K G YG VQ+G +D++ P+ AS+ + +D+ITLE+AL L
Sbjct: 592 LGIDPKSGNPVFVKIGRYGPVVQIGAAHADDKEAPKPQFASLMKGQSIDTITLEEALKLF 651
Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLSGNNV 574
P T+G++ +G ++ V + G IR+ K +PK+ P IT E+A+ L+ G V
Sbjct: 652 DLPRTVGEY--EGKVMVAAVGRFGPFIRHDGKFVSIPKDLNPLTITAEEAIALIEGKRV 708
[225][TOP]
>UniRef100_A6C5M1 DNA topoisomerase n=1 Tax=Planctomyces maris DSM 8797
RepID=A6C5M1_9PLAN
Length = 909
Score = 70.1 bits (170), Expect = 1e-10
Identities = 54/177 (30%), Positives = 77/177 (43%), Gaps = 2/177 (1%)
Frame = +2
Query: 35 DKSRVCPSCTEG-TLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTT 211
D +C EG T +V R+G ++ P I + +D +E
Sbjct: 601 DAREICTLDLEGITSAVRVGRYGPYVSNEAEEEPVSASIPDNIAPADLTNELAEKLIRLK 660
Query: 212 IEEPKLLGFNSGSNEKILLKSGPYGIYVQLGED-RKGYTPKRASVPHVKDVDSITLEDAL 388
E PK LG + N I GP+G Y+QLG+ G PKR S+P D D+I E AL
Sbjct: 661 AEGPKSLGMHPEENTPIYKLHGPFGPYLQLGDVVEDGPKPKRVSIPKNVDPDTIDFETAL 720
Query: 389 VLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
L P LG+HP+ G V + + G + + + K I L +A+ELL
Sbjct: 721 KYLSLPRALGEHPETGKKVNAGIGRFGPYVLHDKVYKSLGKEDDILTIDLPRAVELL 777
[226][TOP]
>UniRef100_Q31C99 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. MIT 9312
RepID=Q31C99_PROM9
Length = 868
Score = 69.7 bits (169), Expect = 2e-10
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Frame = +2
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364
D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P D
Sbjct: 648 DKKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNNDQDKAKPRRASLPKELKTD 707
Query: 365 SITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNE----I 532
+TL++ALVLL P LG HP+ G + G Y +++ ++ K + +
Sbjct: 708 DLTLDEALVLLSLPRLLGVHPEGGIVEADRGRFGPYIKWIKNENESENRSLKKEDDVFTV 767
Query: 533 TLEKALELLS 562
L++ALE+L+
Sbjct: 768 DLKRALEILA 777
[227][TOP]
>UniRef100_Q2JWS9 DNA topoisomerase n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JWS9_SYNJA
Length = 886
Score = 69.7 bits (169), Expect = 2e-10
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Frame = +2
Query: 215 EEPKLLGFNSGSNEKI-LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDAL 388
E PK + F+ + E + ++ GPYG YVQLGE + PKR S+P + +T E AL
Sbjct: 659 EGPKPIAFHPETQEPVYVIPQGPYGPYVQLGEVSEENKKPKRTSLPRGLKPEQVTPEIAL 718
Query: 389 VLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
LL P TLG+HP+ G V + + G + +P + I+LE+ALELL+
Sbjct: 719 GLLSLPRTLGEHPESGKKVQAGIGRFGPYVVCDGDFRSLPADEDVLTISLERALELLA 776
Score = 60.8 bits (146), Expect = 7e-08
Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Frame = +2
Query: 221 PKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQ 400
P+ LG + S +K+ G +G YV D + S+P +DV +I+LE AL LL
Sbjct: 724 PRTLGEHPESGKKVQAGIGRFGPYVVCDGDFR-------SLPADEDVLTISLERALELLA 776
Query: 401 YPLT------------LGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEK 544
P LG HP+DG PV L G +++ A +PK+ P +TLE
Sbjct: 777 QPKKGRGRGSAKPLRELGSHPEDGEPVTLHDGPYGLYVKHGKVNASLPKDLSPEAVTLEM 836
Query: 545 ALELLS 562
ALELL+
Sbjct: 837 ALELLA 842
[228][TOP]
>UniRef100_A2BPR8 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. AS9601
RepID=A2BPR8_PROMS
Length = 868
Score = 69.7 bits (169), Expect = 2e-10
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364
D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P D
Sbjct: 648 DIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNNDQDKAKPRRASLPKELKTD 707
Query: 365 SITLEDALVLLQYPLTLGKHPKDG 436
+TL++ALVLL P LG HP+ G
Sbjct: 708 DLTLDEALVLLSLPRLLGAHPEGG 731
[229][TOP]
>UniRef100_Q1PJN8 DNA topoisomerase n=1 Tax=uncultured Prochlorococcus marinus clone
HOT0M-10D2 RepID=Q1PJN8_PROMA
Length = 726
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 188 DTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVD 364
D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P D
Sbjct: 506 DIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNNDQDKAKPRRASLPKELKTD 565
Query: 365 SITLEDALVLLQYPLTLGKHPKDG 436
+TL++ALVLL P LG HP+ G
Sbjct: 566 DLTLDEALVLLSLPRLLGVHPEGG 589
[230][TOP]
>UniRef100_P34185 DNA topoisomerase 1 n=2 Tax=Synechococcus elongatus RepID=TOP1_SYNE7
Length = 883
Score = 69.3 bits (168), Expect = 2e-10
Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 10/170 (5%)
Frame = +2
Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262
++ RFGA D P + K L +D D + E P LG + ++E I
Sbjct: 611 RIGRFGAYLEAEADGEPIKANLPKELTPADLDVQRVETLLRQKTEGPDQLGTHPETDEPI 670
Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439
L +G YG YVQLG + PKRAS+P +++I+LE A+ LL P TLG+HP+ G
Sbjct: 671 YLLTGAYGPYVQLGAATEEKPKPKRASLPKGMSLETISLEQAVGLLSLPRTLGEHPETGR 730
Query: 440 PVILKVAK---------GGYSIRYRDKIALVPKNTKPNEITLEKALELLS 562
+ + + GG YR + + I L++ALELL+
Sbjct: 731 RIQAGLGRFGPYVVCDLGGGEKDYRS----LKADDDVLTIDLDRALELLA 776
[231][TOP]
>UniRef100_B7JYQ6 DNA topoisomerase n=1 Tax=Cyanothece sp. PCC 8801 RepID=B7JYQ6_CYAP8
Length = 877
Score = 68.9 bits (167), Expect = 3e-10
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
Frame = +2
Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262
K+ +FG + + I L +D + E+ IE P LG + + E I
Sbjct: 611 KIGKFGPYIEVNQGEEVVTASIPADLTPADLNPEQIATILKQKIEGPDKLGLHPETGEGI 670
Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439
+ +G YG YVQLGE + PKRAS+P + +TLE A+ LL P LG HP+ G
Sbjct: 671 FILTGTYGPYVQLGEVSDENPKPKRASLPKGVKPEDVTLEIAVGLLSLPRLLGTHPETGA 730
Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562
+ + + G Y + + K ++ K + ++LE+ALELL+
Sbjct: 731 KIKASLGRFGPYVVHDQGKDGKDYRSLKAEDDILTVSLERALELLA 776
[232][TOP]
>UniRef100_C7QKW5 DNA topoisomerase I n=1 Tax=Cyanothece sp. PCC 8802
RepID=C7QKW5_CYAP0
Length = 877
Score = 68.9 bits (167), Expect = 3e-10
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
Frame = +2
Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262
K+ +FG + + I L +D + E+ IE P LG + + E I
Sbjct: 611 KIGKFGPYIEVNQGEEVVTASIPADLTPADLNPEQIATILKQKIEGPDKLGLHPETGEGI 670
Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439
+ +G YG YVQLGE + PKRAS+P + +TLE A+ LL P LG HP+ G
Sbjct: 671 FILTGTYGPYVQLGEVSDENPKPKRASLPKGVKPEDVTLEIAVGLLSLPRLLGTHPETGA 730
Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562
+ + + G Y + + K ++ K + ++LE+ALELL+
Sbjct: 731 KIKASLGRFGPYVVHDQGKDGKDYRSLKAEDDILTVSLERALELLA 776
[233][TOP]
>UniRef100_A9G971 DNA topoisomerase n=1 Tax=Phaeobacter gallaeciensis BS107
RepID=A9G971_9RHOB
Length = 900
Score = 68.9 bits (167), Expect = 3e-10
Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
RVCP C G L K SR G F+GC +P C Y + E
Sbjct: 613 RVCPKCGAGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEGYE------------- 657
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHV-KDV------DSITLE 379
++LG + G ++I LKSG +G YVQ GE + P R+S+P KD + +TLE
Sbjct: 658 RILGEDDG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQGKDFLPGWGPNEVTLE 715
Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556
A+ LL P +G+HP +G + + + G I ++ P KP + L++ L++
Sbjct: 716 QAVTLLTLPREIGQHP-EGGAIQANLGRFGPYIAHQK-----PDEEKPVYVNLKETLDV 768
[234][TOP]
>UniRef100_A9EWC2 DNA topoisomerase n=1 Tax=Phaeobacter gallaeciensis 2.10
RepID=A9EWC2_9RHOB
Length = 890
Score = 68.9 bits (167), Expect = 3e-10
Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
RVCP C G L K SR G F+GC +P C Y + E
Sbjct: 613 RVCPKCGAGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEGYE------------- 657
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHV-KDV------DSITLE 379
++LG + G ++I LKSG +G YVQ GE + P R+S+P KD + +TLE
Sbjct: 658 RILGEDDG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQGKDFLPGWGPNEVTLE 715
Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556
A+ LL P +G+HP +G + + + G I ++ P KP + L++ L++
Sbjct: 716 QAVTLLTLPREIGQHP-EGGAIQANLGRFGPYIAHQK-----PDEEKPVYVNLKETLDV 768
[235][TOP]
>UniRef100_B3TB56 Putative uncharacterized protein n=1 Tax=uncultured marine
microorganism HF4000_APKG8K5 RepID=B3TB56_9ZZZZ
Length = 843
Score = 68.6 bits (166), Expect = 3e-10
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +2
Query: 221 PKLLGFNSGSNEKILLKSGPYGIYVQLGEDRK-GYTPKRASVPHVKDVDSITLEDALVLL 397
P LG+ + E + L+ GPYG+Y+Q+GE + P R S+P ++I LE AL +L
Sbjct: 729 PVRLGYTP-NREALTLRKGPYGLYLQVGEKSETNKKPTRISIPKNMKPETIDLEVALAML 787
Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
P LG HP PV++KV K G+ I+ DK + +TL A+E L
Sbjct: 788 SLPRELGMHPDLEEPVMVKVGKYGFYIQCNDKNIPLKNMDMALNMTLSDAVEAL 841
[236][TOP]
>UniRef100_C9CZJ8 DNA topoisomerase I n=1 Tax=Silicibacter sp. TrichCH4B
RepID=C9CZJ8_9RHOB
Length = 884
Score = 68.6 bits (166), Expect = 3e-10
Identities = 58/179 (32%), Positives = 83/179 (46%), Gaps = 8/179 (4%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP C G L K SR G F+GC +P C Y + E
Sbjct: 613 RLCPKCGAGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEGYE------------- 657
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHV-KDV------DSITLE 379
++LG + G ++I LKSG +G YVQ GE + P R+S+P KD + ITLE
Sbjct: 658 RILGEDEG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQGKDYLPGWGPNDITLE 715
Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556
A+ LL P +G HP DG V + + G I ++ P KP + L++ L++
Sbjct: 716 QAVTLLTLPREIGAHP-DGGVVSSNLGRFGPYIMHQR-----PDEEKPVYVNLKETLDV 768
[237][TOP]
>UniRef100_UPI0001B4AF42 DNA topoisomerase I n=1 Tax=Bacteroides sp. 2_1_33B
RepID=UPI0001B4AF42
Length = 782
Score = 67.8 bits (164), Expect = 6e-10
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Frame = +2
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLG----EDRKGYTPKRASVPHVKDVDSITLEDALVLL 397
LG + S + + +K G YG VQ+G ED++ P+ A++ + +++ITLE+AL L
Sbjct: 592 LGIDPKSGKPVFVKIGRYGPVVQIGQAHPEDKEAPKPQFATLMKGQSIETITLEEALKLF 651
Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
P T+G++ +G ++ V + G IR+ K +PK P IT E+A+EL+
Sbjct: 652 DLPRTIGEY--EGKVMVAAVGRFGPFIRHDGKFVSIPKGLNPLSITAEEAIELI 703
[238][TOP]
>UniRef100_Q1GE45 DNA topoisomerase n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GE45_SILST
Length = 893
Score = 67.8 bits (164), Expect = 6e-10
Identities = 57/179 (31%), Positives = 80/179 (44%), Gaps = 8/179 (4%)
Frame = +2
Query: 44 RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEP 223
R+CP C G L K SR G F+GC +P C Y + E
Sbjct: 613 RICPKCGAGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEGYE------------- 657
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHV-KDV------DSITLE 379
++LG + G ++I LKSG +G YVQ GE + P R+S+P KD + ITLE
Sbjct: 658 RVLGEDDG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQGKDYLPGWGPNEITLE 715
Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALEL 556
A+ LL P +G HP+ G G Y + R P KP + L++ L++
Sbjct: 716 QAVTLLTLPREIGAHPEGGVVSSNLGRFGPYIMHQR------PDEEKPVYVNLKETLDV 768
[239][TOP]
>UniRef100_A6LHY3 DNA topoisomerase n=1 Tax=Parabacteroides distasonis ATCC 8503
RepID=A6LHY3_PARD8
Length = 782
Score = 67.8 bits (164), Expect = 6e-10
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Frame = +2
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLG----EDRKGYTPKRASVPHVKDVDSITLEDALVLL 397
LG + S + + +K G YG VQ+G ED++ P+ A++ + +++ITLE+AL L
Sbjct: 592 LGIDPKSGKPVFVKIGRYGPVVQIGQAHPEDKEAPKPQFATLMKGQSIETITLEEALKLF 651
Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
P T+G++ +G ++ V + G IR+ K +PK P IT E+A+EL+
Sbjct: 652 DLPRTIGEY--EGKVMVAAVGRFGPFIRHDGKFVSIPKGLNPLSITAEEAIELI 703
[240][TOP]
>UniRef100_C7X5S2 DNA topoisomerase I n=1 Tax=Parabacteroides sp. D13
RepID=C7X5S2_9PORP
Length = 782
Score = 67.8 bits (164), Expect = 6e-10
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Frame = +2
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLG----EDRKGYTPKRASVPHVKDVDSITLEDALVLL 397
LG + S + + +K G YG VQ+G ED++ P+ A++ + +++ITLE+AL L
Sbjct: 592 LGIDPKSGKPVFVKIGRYGPVVQIGQAHPEDKEAPKPQFATLMKGQSIETITLEEALKLF 651
Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
P T+G++ +G ++ V + G IR+ K +PK P IT E+A+EL+
Sbjct: 652 DLPRTIGEY--EGKVMVAAVGRFGPFIRHDGKFVSIPKGLNPLSITAEEAIELI 703
[241][TOP]
>UniRef100_A3ILD7 DNA topoisomerase n=1 Tax=Cyanothece sp. CCY0110 RepID=A3ILD7_9CHRO
Length = 881
Score = 67.8 bits (164), Expect = 6e-10
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 6/166 (3%)
Frame = +2
Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262
K+ +FG I + I L SD + E+ E P+ LG + + E I
Sbjct: 611 KIGKFGPYVEIEQGEEKITASIPADLTPSDLNPEQVNKLLKQKTEGPEKLGLHPETGEPI 670
Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439
+ G YG YVQLGE + PKRAS+P ++ +TL+ A+ LL P LG HP
Sbjct: 671 YILIGSYGPYVQLGEVSEENKKPKRASLPKGTKIEDVTLDMAVGLLALPRLLGTHPDTEA 730
Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562
+ + + G Y + + K ++ K + +TLE+ALELL+
Sbjct: 731 KIKASLGRFGPYVVHDQGKNGKDYRSLKKEDDVLTVTLERALELLA 776
[242][TOP]
>UniRef100_UPI00019694E2 hypothetical protein BACCELL_02476 n=1 Tax=Bacteroides
cellulosilyticus DSM 14838 RepID=UPI00019694E2
Length = 795
Score = 67.4 bits (163), Expect = 7e-10
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Frame = +2
Query: 146 IAKTLYSSDDDDEEDT-PQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGY 322
I KT Y + E T +N ++LG + S + + +K G +G VQ+G
Sbjct: 576 IMKTFYKTFHPSVESTLAAKNAHKTGERILGDDPVSGKPVSVKIGRFGPVVQIGSAEDEE 635
Query: 323 TPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIAL 502
P+ + + + +++ITLE+A+ L + P TLG+H +G V + + G I Y
Sbjct: 636 KPRFSPLKKGQSIETITLEEAMELFKLPRTLGEH--EGKTVTVNAGRFGPYIYYSGTYTS 693
Query: 503 VPKNTKPNEITLEKALELL 559
+PK P EI LE+ALEL+
Sbjct: 694 LPKGVDPMEIELEEALELI 712
[243][TOP]
>UniRef100_B3ETD4 DNA topoisomerase n=1 Tax=Candidatus Amoebophilus asiaticus 5a2
RepID=B3ETD4_AMOA5
Length = 780
Score = 67.4 bits (163), Expect = 7e-10
Identities = 33/120 (27%), Positives = 70/120 (58%)
Frame = +2
Query: 200 QNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLE 379
+ T I ++LG + S + + + G +G VQ+G + + P+ AS+ + ++SITLE
Sbjct: 588 ERTAINTSRMLGHDPVSGKPVTARIGRFGPLVQIGNNEEDEAPRFASLKKDQRIESITLE 647
Query: 380 DALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
+AL L ++P T+G+ + P+ + + G ++Y+++ +PK P +T E+A++++
Sbjct: 648 EALTLFKFPRTVGQW--ENLPIEASIGRFGPYLKYQNQFYTLPKEEDPLTVTEERAIQII 705
[244][TOP]
>UniRef100_B7BGA5 Putative uncharacterized protein (Fragment) n=1 Tax=Parabacteroides
johnsonii DSM 18315 RepID=B7BGA5_9PORP
Length = 391
Score = 67.4 bits (163), Expect = 7e-10
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 4/116 (3%)
Frame = +2
Query: 230 LGFNSGSNEKILLKSGPYGIYVQLG----EDRKGYTPKRASVPHVKDVDSITLEDALVLL 397
LG + S + +K G YG VQ+G +D++ P+ AS+ +D+ITLE+AL L
Sbjct: 203 LGIDPKSGNPVFVKIGRYGPVVQIGVAHADDKEAPKPQFASLMKGLSIDTITLEEALKLF 262
Query: 398 QYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELLSG 565
P T+G++ +G ++ V + G IR+ K +PK+ P IT E+A+ L+ G
Sbjct: 263 DLPRTVGEY--EGKVMVAAVGRFGPFIRHDGKFVSIPKDLNPLTITAEEAIALIDG 316
[245][TOP]
>UniRef100_B3C7S7 DNA topoisomerase n=1 Tax=Bacteroides intestinalis DSM 17393
RepID=B3C7S7_9BACE
Length = 795
Score = 67.4 bits (163), Expect = 7e-10
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Frame = +2
Query: 146 IAKTLYSSDDDDEEDT-PQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGY 322
I KT Y + E T +N +LLG + S + + +K G +G VQ+G
Sbjct: 576 IMKTFYKTFHPSVESTLAAKNAHKTGERLLGDDPVSGKPVSVKIGRFGPVVQIGSAEDEE 635
Query: 323 TPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGHPVILKVAKGGYSIRYRDKIAL 502
P+ + + +++ITLE+A+ L + P TLG+H +G V + + G I Y
Sbjct: 636 KPRFSPLKKGMSIETITLEEAMELFKLPRTLGEH--EGKTVSVNAGRFGPYIYYNGTYTS 693
Query: 503 VPKNTKPNEITLEKALELL 559
+PK P EI LE+ALEL+
Sbjct: 694 LPKGADPMEIELEEALELI 712
[246][TOP]
>UniRef100_P73810 DNA topoisomerase 1 n=1 Tax=Synechocystis sp. PCC 6803
RepID=TOP1_SYNY3
Length = 898
Score = 67.4 bits (163), Expect = 7e-10
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
Frame = +2
Query: 83 KVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKI 262
K+ +FG I + I + L +D + E+ E P +G + + E I
Sbjct: 611 KIGKFGPYIEIPQGEEIITASIPQDLTPADLNPEQVAVLLKQKTEGPDKVGIHPETGEPI 670
Query: 263 LLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKDVDSITLEDALVLLQYPLTLGKHPKDGH 439
+ G YG YVQLGE + PKR S+P + +TLE A+ LL P LG+HP+ G
Sbjct: 671 FILIGAYGPYVQLGEATEENKKPKRTSLPKGVKPEDVTLEMAVGLLALPRNLGEHPESGK 730
Query: 440 PVILKVAK-GGYSIRYRDKIALVPKNTKPNE----ITLEKALELLS 562
+ + + G Y + + K ++ K ++ ITLE+ALELL+
Sbjct: 731 NIKASLGRFGPYVVHDQGKDGKDYRSLKGDDDVLTITLERALELLA 776
[247][TOP]
>UniRef100_A6L010 DNA topoisomerase n=1 Tax=Bacteroides vulgatus ATCC 8482
RepID=A6L010_BACV8
Length = 812
Score = 66.6 bits (161), Expect = 1e-09
Identities = 38/112 (33%), Positives = 64/112 (57%)
Frame = +2
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
++LG + S + + +K G +G +Q+G P+ A + +++ITLE+AL +
Sbjct: 593 RVLGTDPVSGKPVSVKIGRFGPVIQIGTADDEEKPRFAQLAKGLSMETITLEEALDAFKL 652
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
P TLG + DGH V + V + G +RY +PK T P EI+L++A+EL+
Sbjct: 653 PRTLGDY--DGHTVTVGVGRFGPYVRYDKLFVSIPKGTDPMEISLDEAVELI 702
[248][TOP]
>UniRef100_C6YZ92 DNA topoisomerase n=1 Tax=Bacteroides sp. 4_3_47FAA
RepID=C6YZ92_9BACE
Length = 812
Score = 66.6 bits (161), Expect = 1e-09
Identities = 38/112 (33%), Positives = 64/112 (57%)
Frame = +2
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
++LG + S + + +K G +G +Q+G P+ A + +++ITLE+AL +
Sbjct: 593 RVLGTDPVSGKPVSVKIGRFGPVIQIGTADDEEKPRFAQLTKGLSMETITLEEALDAFKL 652
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
P TLG + DGH V + V + G +RY +PK T P EI+L++A+EL+
Sbjct: 653 PRTLGDY--DGHTVTVGVGRFGPYVRYDKLFVSIPKGTDPMEISLDEAVELI 702
[249][TOP]
>UniRef100_C3RCM9 DNA topoisomerase n=1 Tax=Bacteroides sp. D4 RepID=C3RCM9_9BACE
Length = 812
Score = 66.6 bits (161), Expect = 1e-09
Identities = 38/112 (33%), Positives = 64/112 (57%)
Frame = +2
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
++LG + S + + +K G +G +Q+G P+ A + +++ITLE+AL +
Sbjct: 593 RVLGTDPVSGKPVSVKIGRFGPVIQIGTADDEEKPRFAQLAKGLSMETITLEEALDAFKL 652
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
P TLG + DGH V + V + G +RY +PK T P EI+L++A+EL+
Sbjct: 653 PRTLGDY--DGHTVTVGVGRFGPYVRYDKLFVSIPKGTDPMEISLDEAVELI 702
[250][TOP]
>UniRef100_C3Q3Q1 DNA topoisomerase n=1 Tax=Bacteroides sp. 9_1_42FAA
RepID=C3Q3Q1_9BACE
Length = 812
Score = 66.6 bits (161), Expect = 1e-09
Identities = 38/112 (33%), Positives = 64/112 (57%)
Frame = +2
Query: 224 KLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLLQY 403
++LG + S + + +K G +G +Q+G P+ A + +++ITLE+AL +
Sbjct: 593 RVLGTDPVSGKPVSVKIGRFGPVIQIGTADDEEKPRFAQLAKGLSMETITLEEALDAFKL 652
Query: 404 PLTLGKHPKDGHPVILKVAKGGYSIRYRDKIALVPKNTKPNEITLEKALELL 559
P TLG + DGH V + V + G +RY +PK T P EI+L++A+EL+
Sbjct: 653 PRTLGDY--DGHTVTVGVGRFGPYVRYDKLFVSIPKGTDPMEISLDEAVELI 702