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[1][TOP] >UniRef100_A2Q5K3 Helix-loop-helix DNA-binding n=1 Tax=Medicago truncatula RepID=A2Q5K3_MEDTR Length = 484 Score = 263 bits (672), Expect = 7e-69 Identities = 133/170 (78%), Positives = 143/170 (84%) Frame = +2 Query: 2 LKSLQLQVQRVQLMQMMSMGCGMVPMMFPGIQQYMPTIGMGMGMGMGMEMGINRPIMPFP 181 LKSLQLQVQ MMSMGCGMVPMMFPGIQQYMPT+GMGMGMGM EMGINRP+MPFP Sbjct: 304 LKSLQLQVQ------MMSMGCGMVPMMFPGIQQYMPTVGMGMGMGM--EMGINRPVMPFP 355 Query: 182 NMLSGSALPAAANFGPRFAAMPPFHVPHVPTPDSSRMQATNQAVNNILTSVGTYDSNQSH 361 NMLSGSALPAAAN GPRFA MPPFH+PHVPTP SSRMQA NQ NN++TS GT+DSNQS Sbjct: 356 NMLSGSALPAAANLGPRFA-MPPFHMPHVPTPGSSRMQAANQVDNNVITSAGTHDSNQSR 414 Query: 362 IPNFTDPYQQYLGPHQMQFQSMQSRAMNQPNVGKPSITRPLENPEIHQSG 511 PNF+D YQQYLGPHQMQFQ MQ++AMNQPNV +RPLE PE QSG Sbjct: 415 TPNFSDSYQQYLGPHQMQFQLMQNQAMNQPNV-----SRPLEKPETRQSG 459 [2][TOP] >UniRef100_UPI00019858FA PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI00019858FA Length = 709 Score = 203 bits (517), Expect = 7e-51 Identities = 106/181 (58%), Positives = 132/181 (72%), Gaps = 3/181 (1%) Frame = +2 Query: 2 LKSLQLQVQRVQLMQMMSMGCGMVPMMFPGIQQYMPTIGMGMGMGMGMEMGINRPIMPFP 181 LKSLQLQVQ MMSMGC MVPMM+PG+QQYMP +GMGMGMGMGMEMG+NRP+MPFP Sbjct: 499 LKSLQLQVQ------MMSMGCSMVPMMYPGVQQYMPQMGMGMGMGMGMEMGMNRPMMPFP 552 Query: 182 NMLSGSALP---AAANFGPRFAAMPPFHVPHVPTPDSSRMQATNQAVNNILTSVGTYDSN 352 ++L GS LP AAA+ G R+ MP FH+PH+ PDSSR+QA NQ+ + +L S+GT SN Sbjct: 553 SVLGGSTLPTTAAAAHLGQRY-PMPAFHMPHMAAPDSSRIQANNQS-DPVLNSLGTQSSN 610 Query: 353 QSHIPNFTDPYQQYLGPHQMQFQSMQSRAMNQPNVGKPSITRPLENPEIHQSGDK*LFDS 532 Q +PNF DPY QYL QMQ Q++AM Q N KPS ++ EN E H+SG + + ++ Sbjct: 611 QPRVPNFADPYLQYL--QQMQMPPAQNQAMGQQNTSKPSTSKGTENLENHRSGGEYILNT 668 Query: 533 Y 535 Y Sbjct: 669 Y 669 [3][TOP] >UniRef100_B9S581 Phytochrome-interacting factor, putative n=1 Tax=Ricinus communis RepID=B9S581_RICCO Length = 572 Score = 199 bits (505), Expect = 2e-49 Identities = 102/174 (58%), Positives = 129/174 (74%), Gaps = 4/174 (2%) Frame = +2 Query: 2 LKSLQLQVQRVQLMQMMSMGCGMVPMMFPGIQQYMPTIGMGMGMGMGMEMGINRPIMPFP 181 LKSLQLQVQ MMSMGC MVPMMFPGIQQYMP +GMGMG+GMGMEMG++RP+MPFP Sbjct: 406 LKSLQLQVQ------MMSMGCSMVPMMFPGIQQYMPPMGMGMGIGMGMEMGMSRPMMPFP 459 Query: 182 NMLSGSALP----AAANFGPRFAAMPPFHVPHVPTPDSSRMQATNQAVNNILTSVGTYDS 349 N+LSG+ LP AAA+ GPRF MP FH+P VP PD SR+QA +Q+ + +++++ T + Sbjct: 460 NVLSGAPLPTQAAAAAHLGPRF-HMPAFHMPPVPAPDPSRIQAASQS-DPMVSAISTQNP 517 Query: 350 NQSHIPNFTDPYQQYLGPHQMQFQSMQSRAMNQPNVGKPSITRPLENPEIHQSG 511 NQ +PNF DPYQQYLG Q+Q +++AM QP+ KP + EN + HQSG Sbjct: 518 NQPRLPNFVDPYQQYLGLQQLQIPVPENQAMAQPSTSKPGANQGAENLDNHQSG 571 [4][TOP] >UniRef100_B9GR94 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GR94_POPTR Length = 615 Score = 189 bits (479), Expect = 2e-46 Identities = 105/174 (60%), Positives = 126/174 (72%), Gaps = 4/174 (2%) Frame = +2 Query: 2 LKSLQLQVQRVQLMQMMSMGCGMVPMMFPGIQQYMPTIGMGMGMGMGMEMGINRPIMPFP 181 LKSLQLQVQ MMSMGC MVPMMFPG QQYMP MG+GMGMGMEMG++RP+MPFP Sbjct: 413 LKSLQLQVQ------MMSMGCSMVPMMFPGFQQYMPP--MGIGMGMGMEMGLSRPMMPFP 464 Query: 182 NMLSG--SALP-AAANFGPRFAAMPPFHVPHVPTPDSSRMQATNQAVNNILTSVGTYDSN 352 N+L+G SA P AAA+ PRF +PPFHVP +P PD SR+Q TNQ V+ +L S G + N Sbjct: 465 NILAGAPSATPAAAAHLVPRF-PVPPFHVPPIPAPDPSRVQPTNQ-VDPMLGSPGQQNPN 522 Query: 353 QSHIPNFTDPYQQYLGPHQMQFQSM-QSRAMNQPNVGKPSITRPLENPEIHQSG 511 Q +PNF DPYQ YLG +QM + +++AM QP+ KPS +R ENP HQSG Sbjct: 523 QPRVPNFVDPYQHYLGLYQMHLPGVPRNQAMAQPSTSKPSTSRVAENPGNHQSG 576 [5][TOP] >UniRef100_A7QKQ9 Chromosome undetermined scaffold_114, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7QKQ9_VITVI Length = 480 Score = 176 bits (446), Expect = 1e-42 Identities = 90/140 (64%), Positives = 107/140 (76%), Gaps = 3/140 (2%) Frame = +2 Query: 2 LKSLQLQVQRVQLMQMMSMGCGMVPMMFPGIQQYMPTIGMGMGMGMGMEMGINRPIMPFP 181 LKSLQLQVQ MMSMGC MVPMM+PG+QQYMP +GMGMGMGMGMEMG+NRP+MPFP Sbjct: 298 LKSLQLQVQ------MMSMGCSMVPMMYPGVQQYMPQMGMGMGMGMGMEMGMNRPMMPFP 351 Query: 182 NMLSGSALP---AAANFGPRFAAMPPFHVPHVPTPDSSRMQATNQAVNNILTSVGTYDSN 352 ++L GS LP AAA+ G R+ MP FH+PH+ PDSSR+QA NQ+ + +L S+GT SN Sbjct: 352 SVLGGSTLPTTAAAAHLGQRY-PMPAFHMPHMAAPDSSRIQANNQS-DPVLNSLGTQSSN 409 Query: 353 QSHIPNFTDPYQQYLGPHQM 412 Q +PNF DPY QYL QM Sbjct: 410 QPRVPNFADPYLQYLQQMQM 429 [6][TOP] >UniRef100_Q8GZM7 Transcription factor PIF1 n=2 Tax=Arabidopsis thaliana RepID=PIF1_ARATH Length = 478 Score = 98.6 bits (244), Expect = 3e-19 Identities = 73/182 (40%), Positives = 95/182 (52%), Gaps = 12/182 (6%) Frame = +2 Query: 2 LKSLQLQVQRVQLMQMMSMGCGMVPMMFPGIQQYMPTIGMGMGMGMGMEMGINRPI---- 169 +KSLQLQ+Q MMSMGCGM+PMM+PG+QQYMP + MGMGM N+PI Sbjct: 330 MKSLQLQIQ------MMSMGCGMMPMMYPGMQQYMPHMAMGMGM--------NQPIPPPS 375 Query: 170 -MPFPNMLSGS-ALPA---AANFGPRFAAMPPFHVPHVPTPDSSRMQATNQAVNNILTSV 334 MPFPNML+ LP A GP++ P H D SR+ NQ Sbjct: 376 FMPFPNMLAAQRPLPTQTHMAGSGPQY----PVH-----ASDPSRVFVPNQ--------- 417 Query: 335 GTYD--SNQSHIP-NFTDPYQQYLGPHQMQFQSMQSRAMNQPNVGKPSITRPLENPEIHQ 505 YD S Q P +TDPYQQ+ G H Q Q++A + P+ + S ++ E+ H Sbjct: 418 -QYDPTSGQPQYPAGYTDPYQQFRGLHPTQPPQFQNQATSYPSSSRVSSSKESEDHGNHT 476 Query: 506 SG 511 +G Sbjct: 477 TG 478 [7][TOP] >UniRef100_B9GSQ9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GSQ9_POPTR Length = 233 Score = 69.3 bits (168), Expect = 2e-10 Identities = 55/162 (33%), Positives = 73/162 (45%), Gaps = 5/162 (3%) Frame = +2 Query: 2 LKSLQLQVQRVQLMQMMSMGCGMVPMMFPGIQQYMPTIGMGMGMGMGMEMGINRPIMPFP 181 LKSLQLQ +Q+M MG G+VP+MFPG+Q +M +GMGMGMG P P Sbjct: 80 LKSLQLQ------LQVMWMGSGIVPVMFPGVQHFMSRMGMGMGMGP----------PPLP 123 Query: 182 NMLSGSALPAAANFGPRFAAMPPFHVPHVPTPDS--SRMQATNQAV---NNILTSVGTYD 346 +M + P H+P VP D S NQAV +L V Sbjct: 124 SMQN------------------PMHLPRVPLVDQSISMTPTQNQAVICQTPVLNPVNY-- 163 Query: 347 SNQSHIPNFTDPYQQYLGPHQMQFQSMQSRAMNQPNVGKPSI 472 NQ P F+D Y +++G H S+ MN G ++ Sbjct: 164 QNQMQNPTFSDQYARFMGFH----MQAASQPMNMFRFGSQTV 201 [8][TOP] >UniRef100_Q8GT73 Transcription factor bHLH119 n=1 Tax=Arabidopsis thaliana RepID=BH119_ARATH Length = 544 Score = 68.2 bits (165), Expect = 4e-10 Identities = 58/168 (34%), Positives = 81/168 (48%), Gaps = 9/168 (5%) Frame = +2 Query: 2 LKSLQLQVQRVQLMQMMSMGCGMVP-MMFPG-IQQYMPTIGMGMGMGMGMEMGINRP--I 169 +KSLQLQ+Q MMSMG GM+P MM G QQ+MP + MGM G+NRP Sbjct: 403 VKSLQLQIQ------MMSMGHGMMPPMMHEGNTQQFMPHMAMGM-------KGMNRPPPF 449 Query: 170 MPFPNMLSGSALPAA---ANFGPRFAAMPPFHVPHVPTPDSSRMQATNQAVNNILTSVGT 340 +PFP G P A GP + A+ + P D SR+ + N + Sbjct: 450 VPFP----GKTFPRPGHMAGVGPSYPALR-YPFPDTQASDLSRVHVPSLHSNPV------ 498 Query: 341 YDSNQSHIPNFTDPYQQYLGPHQMQFQ--SMQSRAMNQPNVGKPSITR 478 NQ P + +PY Q++G HQMQ +Q + +QP+ S ++ Sbjct: 499 --PNQPRFPAYINPYSQFVGLHQMQQPPLPLQGQPTSQPSFSHASTSK 544 [9][TOP] >UniRef100_UPI0001984343 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001984343 Length = 531 Score = 63.5 bits (153), Expect = 1e-08 Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 1/165 (0%) Frame = +2 Query: 2 LKSLQLQVQRVQLMQMMSMGCGMVPMMFPGIQQYMPTIGMGMGMGMGMEMGINRPIMPFP 181 LKSLQLQ +Q+M MG G+ PMMFPG+Q YM +GMGM P P Sbjct: 384 LKSLQLQ------LQLMWMGGGVAPMMFPGVQHYMARMGMGMCP------------PPLP 425 Query: 182 NMLSGSALPAAANFGPRFAAMPPFHVPHV-PTPDSSRMQATNQAVNNILTSVGTYDSNQS 358 ++ + LP +A+PP + P + TP + + NQ N Sbjct: 426 SIHNPMHLPRVQLVDQSTSAVPPSNQPPICQTPVLNPVNYQNQMPN-------------- 471 Query: 359 HIPNFTDPYQQYLGPHQMQFQSMQSRAMNQPNVGKPSITRPLENP 493 PNF + + Y+G H MQ S+ MN + G S P+ +P Sbjct: 472 --PNFPEQFAHYMGFHPMQ---TPSQPMNVFSFGSQS--HPMASP 509 [10][TOP] >UniRef100_Q9SVU7 Putative transcription factor bHLH056 n=1 Tax=Arabidopsis thaliana RepID=BH056_ARATH Length = 478 Score = 63.2 bits (152), Expect = 1e-08 Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 3/128 (2%) Frame = +2 Query: 41 MQMMSMGCGMV-PMMFPG-IQQYMPTIGMGMGMGMGMEMGINRPIMPFPNMLSGSALPAA 214 ++MMS G GM+ PMM G QQ+MP M M+M P +PFP + +PA Sbjct: 345 VEMMSTGQGMMSPMMNAGNTQQFMPH--------MAMDMNRPPPFIPFPG--TSFPMPAQ 394 Query: 215 -ANFGPRFAAMPPFHVPHVPTPDSSRMQATNQAVNNILTSVGTYDSNQSHIPNFTDPYQQ 391 A GP + A P + P++ T D SR++ + N + SNQ P + +PY Q Sbjct: 395 MAGVGPSYPA-PRYPFPNIQTFDPSRVRLPSPQPNPV--------SNQPQFPAYMNPYSQ 445 Query: 392 YLGPHQMQ 415 + GPHQ+Q Sbjct: 446 FAGPHQLQ 453 [11][TOP] >UniRef100_A7PJR3 Chromosome chr12 scaffold_18, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7PJR3_VITVI Length = 437 Score = 62.8 bits (151), Expect = 2e-08 Identities = 48/145 (33%), Positives = 65/145 (44%), Gaps = 1/145 (0%) Frame = +2 Query: 2 LKSLQLQVQRVQLMQMMSMGCGMVPMMFPGIQQYMPTIGMGMGMGMGMEMGINRPIMPFP 181 LKSLQLQ +Q+M MG G+ PMMFPG+Q YM +GMGM P P Sbjct: 326 LKSLQLQ------LQLMWMGGGVAPMMFPGVQHYMARMGMGMCP------------PPLP 367 Query: 182 NMLSGSALPAAANFGPRFAAMPPFHVPHV-PTPDSSRMQATNQAVNNILTSVGTYDSNQS 358 ++ + LP +A+PP + P + TP + + NQ N Sbjct: 368 SIHNPMHLPRVQLVDQSTSAVPPSNQPPICQTPVLNPVNYQNQMPN-------------- 413 Query: 359 HIPNFTDPYQQYLGPHQMQFQSMQS 433 PNF + + Y+G H MQ S S Sbjct: 414 --PNFPEQFAHYMGFHPMQTPSQVS 436 [12][TOP] >UniRef100_UPI0001A7B12C transcription factor n=1 Tax=Arabidopsis thaliana RepID=UPI0001A7B12C Length = 445 Score = 61.6 bits (148), Expect = 4e-08 Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 5/170 (2%) Frame = +2 Query: 2 LKSLQLQVQRVQLMQMMSMGCGMVPMMFPG-IQQYMPTIGMGMGMGMGMEMGINRPIMPF 178 +KSLQ Q+Q + M PMM G QQ+MP M M+M P +PF Sbjct: 301 VKSLQSQIQGM-----------MSPMMNAGNTQQFMPH--------MAMDMNRPPPFIPF 341 Query: 179 PNMLSGSALPAA-ANFGPRFAAMPPFHVPHVPTPDSSRMQATNQAVNNILTSVGTYDSNQ 355 P + +PA A GP + A P + P++ T D SR++ + N + SNQ Sbjct: 342 PG--TSFPMPAQMAGVGPSYPA-PRYPFPNIQTFDPSRVRLPSPQPNPV--------SNQ 390 Query: 356 SHIPNFTDPYQQYLGPHQMQF---QSMQSRAMNQPNVGKPSITRPLENPE 496 P + +PY Q+ GPHQ+Q Q + +Q + G+ S ++ E+ E Sbjct: 391 PQFPAYMNPYSQFAGPHQLQQPPPPPFQGQTTSQLSSGQASSSKEPEDQE 440 [13][TOP] >UniRef100_B9H863 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H863_POPTR Length = 380 Score = 53.9 bits (128), Expect = 9e-06 Identities = 48/162 (29%), Positives = 65/162 (40%), Gaps = 5/162 (3%) Frame = +2 Query: 2 LKSLQLQVQRVQLMQMMSMGCGMVPMMFPGIQQYMPTIGMGMGMGMGMEMGINRPIMPFP 181 LKSLQLQ +Q+M MG GM PM+FPG+Q +M +GMG P P Sbjct: 232 LKSLQLQ------LQVMWMGGGMAPMLFPGVQHFMSRMGMG---------------PPLP 270 Query: 182 NMLSGSALPAAANFGPRFAAMPPFHVPHVPTPDSSRMQATNQ-----AVNNILTSVGTYD 346 +M + P H+P V D S A Q +L V + Sbjct: 271 SMQN------------------PMHLPRVQLIDQSISMAPTQNSGVMCQAPVLNPVNFH- 311 Query: 347 SNQSHIPNFTDPYQQYLGPHQMQFQSMQSRAMNQPNVGKPSI 472 NQ P F D Y +++G H S+ MN G ++ Sbjct: 312 -NQMQNPAFADQYARFMGFH----MQAASQPMNMFRFGSQTV 348