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[1][TOP]
>UniRef100_A2Q3E0 DNA-directed RNA polymerase, 14 to 18 kDa subunit n=1 Tax=Medicago
truncatula RepID=A2Q3E0_MEDTR
Length = 145
Score = 277 bits (709), Expect = 4e-73
Identities = 137/145 (94%), Positives = 139/145 (95%), Gaps = 2/145 (1%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAE--PIETEDKEADQPVERPR 233
MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPD +NDDLDAE PIETE+KE PVERPR
Sbjct: 1 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDNKNDDLDAEGEPIETEEKEDAAPVERPR 60
Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413
RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Sbjct: 61 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 120
Query: 414 DGSYEDWGVDELIVEDSWKRQVGGD 488
DGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 121 DGSYEDWGVDELIVEDSWKRQVGGD 145
[2][TOP]
>UniRef100_B7FHE6 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FHE6_MEDTR
Length = 145
Score = 275 bits (704), Expect = 1e-72
Identities = 136/145 (93%), Positives = 138/145 (95%), Gaps = 2/145 (1%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAE--PIETEDKEADQPVERPR 233
MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPD +NDDLDAE PIETE+KE PVERPR
Sbjct: 1 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDNKNDDLDAEGEPIETEEKEDVAPVERPR 60
Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413
RTSKYMTKYERARI GTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Sbjct: 61 RTSKYMTKYERARIFGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 120
Query: 414 DGSYEDWGVDELIVEDSWKRQVGGD 488
DGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 121 DGSYEDWGVDELIVEDSWKRQVGGD 145
[3][TOP]
>UniRef100_C6SWG7 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SWG7_SOYBN
Length = 142
Score = 260 bits (665), Expect = 5e-68
Identities = 126/143 (88%), Positives = 136/143 (95%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
MAD+DYEDIDMGYE+EPPEPEIEEGAEE D + +ND++ E I+TEDKE +QPV+RPR+T
Sbjct: 1 MADEDYEDIDMGYEDEPPEPEIEEGAEE-DVENKNDEITGESIDTEDKEEEQPVKRPRKT 59
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 60 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 119
Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488
SYEDWGVDELIVEDSWKRQVGGD
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142
[4][TOP]
>UniRef100_B9I4C9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I4C9_POPTR
Length = 143
Score = 258 bits (659), Expect = 2e-67
Identities = 123/143 (86%), Positives = 132/143 (92%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
MAD+DY D+DMGYE+EPPEPEIEEG EE+ + N+D EPIETEDKE +PVERPR+T
Sbjct: 1 MADEDYNDVDMGYEDEPPEPEIEEGVEEDADNDNNEDDKGEPIETEDKEEQEPVERPRKT 60
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
SK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 61 SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 120
Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488
SYEDWGVDELIVEDSWKRQVGGD
Sbjct: 121 SYEDWGVDELIVEDSWKRQVGGD 143
[5][TOP]
>UniRef100_B9ID35 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ID35_POPTR
Length = 143
Score = 254 bits (650), Expect = 3e-66
Identities = 122/143 (85%), Positives = 131/143 (91%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
MADD+Y D+DMGYE+EP EPEIEEGA+E+ + N+D EPIETEDKE PVERPR+T
Sbjct: 1 MADDEYNDVDMGYEDEPAEPEIEEGADEDAENNNNEDDTGEPIETEDKEEQAPVERPRKT 60
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
SK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 61 SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 120
Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488
SYEDWGVDELIVEDSWKRQVGGD
Sbjct: 121 SYEDWGVDELIVEDSWKRQVGGD 143
[6][TOP]
>UniRef100_A7QVJ8 Chromosome chr16 scaffold_189, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QVJ8_VITVI
Length = 142
Score = 245 bits (626), Expect = 2e-63
Identities = 118/143 (82%), Positives = 131/143 (91%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
MAD++Y D+DMGYE+EPPEPEIEEGAEEE + N+D+ + +E ++KE + VERPR+T
Sbjct: 1 MADEEYNDVDMGYEDEPPEPEIEEGAEEEAENNNNEDVP-DALEEQEKEVHETVERPRKT 59
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 60 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 119
Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488
SYEDWGVDELIVEDSWKRQVGGD
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142
[7][TOP]
>UniRef100_Q9FJ98 DNA-directed RNA polymerase II subunit-like protein n=1
Tax=Arabidopsis thaliana RepID=Q9FJ98_ARATH
Length = 144
Score = 244 bits (623), Expect = 3e-63
Identities = 117/144 (81%), Positives = 132/144 (91%), Gaps = 1/144 (0%)
Frame = +3
Query: 60 MADDDYEDID-MGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR 236
MAD+DY D+D +GYE+EP EPEIEEG EE+ K+NDD++ EPIE EDK +PV+RPR+
Sbjct: 1 MADEDYNDVDDLGYEDEPAEPEIEEGVEEDVEMKENDDVNGEPIEAEDKVETEPVQRPRK 60
Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416
TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPD
Sbjct: 61 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPD 120
Query: 417 GSYEDWGVDELIVEDSWKRQVGGD 488
GS+E+WGVDELIVEDSWKRQVGGD
Sbjct: 121 GSFEEWGVDELIVEDSWKRQVGGD 144
[8][TOP]
>UniRef100_A7PJQ3 Chromosome chr12 scaffold_18, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PJQ3_VITVI
Length = 141
Score = 243 bits (620), Expect = 8e-63
Identities = 121/143 (84%), Positives = 130/143 (90%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
MADDDY D+DMGYE+EPPEPEIEEGAEE+ + N+D+ + IET +KE PVER R+T
Sbjct: 1 MADDDYNDMDMGYEDEPPEPEIEEGAEEDADNNNNEDIP-DAIETAEKE-QVPVERSRKT 58
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
Sbjct: 59 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 118
Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488
SYEDWGVDELIVEDSWKRQVGGD
Sbjct: 119 SYEDWGVDELIVEDSWKRQVGGD 141
[9][TOP]
>UniRef100_Q9SJ96 Putative DNA-directed RNA polymerase II subunit n=1 Tax=Arabidopsis
thaliana RepID=Q9SJ96_ARATH
Length = 144
Score = 243 bits (619), Expect = 1e-62
Identities = 116/144 (80%), Positives = 132/144 (91%), Gaps = 1/144 (0%)
Frame = +3
Query: 60 MADDDYEDID-MGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR 236
MADDDY ++D +GYE+EP EPEIEEG EE+ K+NDD++ +P+ETEDK +PV+RPR+
Sbjct: 1 MADDDYNEVDDLGYEDEPAEPEIEEGVEEDADIKENDDVNVDPLETEDKVETEPVQRPRK 60
Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416
TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPD
Sbjct: 61 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPD 120
Query: 417 GSYEDWGVDELIVEDSWKRQVGGD 488
SYE+WGVDELIVEDSWKRQVGGD
Sbjct: 121 MSYEEWGVDELIVEDSWKRQVGGD 144
[10][TOP]
>UniRef100_A2XIZ2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2XIZ2_ORYSI
Length = 143
Score = 237 bits (605), Expect = 4e-61
Identities = 120/144 (83%), Positives = 129/144 (89%), Gaps = 2/144 (1%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPI--ETEDKEADQPVERPR 233
MADDDY D+DMGYE+EPPEPEIEEGAEEE P+ N+D E + E EDKE ++ +RPR
Sbjct: 1 MADDDYNDMDMGYEDEPPEPEIEEGAEEE-PENNNEDGPDEVVGAEAEDKEQEK-TQRPR 58
Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413
+TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLP
Sbjct: 59 KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 118
Query: 414 DGSYEDWGVDELIVEDSWKRQVGG 485
DGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 DGSYEDWGVDELIVEDSWKRQVGG 142
[11][TOP]
>UniRef100_Q8LI69 Os07g0463100 protein n=2 Tax=Oryza sativa RepID=Q8LI69_ORYSJ
Length = 142
Score = 236 bits (602), Expect = 9e-61
Identities = 115/142 (80%), Positives = 125/142 (88%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
MA+DDY D+DMGYE+EPPEPEIEEGAEEE P+ N+D + + ED + + RPR+T
Sbjct: 1 MAEDDYNDMDMGYEDEPPEPEIEEGAEEE-PENNNEDAVDDVVGAEDDKEQEKTARPRKT 59
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG
Sbjct: 60 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119
Query: 420 SYEDWGVDELIVEDSWKRQVGG 485
SYEDWGVDELIVEDSWKRQVGG
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGG 141
[12][TOP]
>UniRef100_Q6F2V1 Os03g0586600 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q6F2V1_ORYSJ
Length = 142
Score = 236 bits (601), Expect = 1e-60
Identities = 116/142 (81%), Positives = 126/142 (88%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
MADDDY D+DMGYE+EPPEPEIEEGAEEE + ++ + E EDKE ++ +RPR+T
Sbjct: 1 MADDDYNDMDMGYEDEPPEPEIEEGAEEEPENNEDGPDEVVGAEAEDKEQEK-TQRPRKT 59
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG
Sbjct: 60 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119
Query: 420 SYEDWGVDELIVEDSWKRQVGG 485
SYEDWGVDELIVEDSWKRQVGG
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGG 141
[13][TOP]
>UniRef100_B6SI57 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide
n=1 Tax=Zea mays RepID=B6SI57_MAIZE
Length = 142
Score = 232 bits (591), Expect = 2e-59
Identities = 116/143 (81%), Positives = 126/143 (88%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
MADDDY +IDMGYE+EPPEPEIEEGAEEE + ++ D E EDKE ++ +R R+T
Sbjct: 1 MADDDYNEIDMGYEDEPPEPEIEEGAEEEPENNEDAPDDVIGGEGEDKEQEK-TKRERKT 59
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
+KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG
Sbjct: 60 TKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119
Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488
SYEDWGVDELIVEDSWKRQVGGD
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142
[14][TOP]
>UniRef100_B4FLZ6 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FLZ6_MAIZE
Length = 142
Score = 231 bits (588), Expect = 4e-59
Identities = 116/143 (81%), Positives = 126/143 (88%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
MADDDY +IDMGYE+EPPEPEIEEGAEEE + ++ D E EDKE ++ +R R+T
Sbjct: 1 MADDDYNEIDMGYEDEPPEPEIEEGAEEELENNEDAPDDVIGGEGEDKEQEK-TKRERKT 59
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
+KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG
Sbjct: 60 TKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119
Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488
SYEDWGVDELIVEDSWKRQVGGD
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142
[15][TOP]
>UniRef100_B6T8K1 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide
n=1 Tax=Zea mays RepID=B6T8K1_MAIZE
Length = 142
Score = 229 bits (584), Expect = 1e-58
Identities = 115/143 (80%), Positives = 125/143 (87%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
MA DDY +IDMGYE+EPPEPEIEEGAEEE + ++ D E EDKE ++ +R R+T
Sbjct: 1 MAXDDYNEIDMGYEDEPPEPEIEEGAEEEPENNEDAPDDVIGGEGEDKEQEK-TKRERKT 59
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
+KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG
Sbjct: 60 TKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119
Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488
SYEDWGVDELIVEDSWKRQVGGD
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142
[16][TOP]
>UniRef100_B6TJG4 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide
n=1 Tax=Zea mays RepID=B6TJG4_MAIZE
Length = 142
Score = 227 bits (578), Expect = 6e-58
Identities = 115/143 (80%), Positives = 125/143 (87%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
MADDDY +IDMGYE+E PEPEIEEGAEEE + ++ D E EDKE ++ +R R+T
Sbjct: 1 MADDDYNEIDMGYEDELPEPEIEEGAEEELENNEDAPDDVIGGEGEDKEQEK-TKRERKT 59
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
+KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG
Sbjct: 60 TKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119
Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488
SYEDWGVDELIVEDSWKRQVGGD
Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142
[17][TOP]
>UniRef100_Q9S7Q6 DNA-directed RNA polymerase IIa n=1 Tax=Nicotiana tabacum
RepID=Q9S7Q6_TOBAC
Length = 143
Score = 225 bits (573), Expect = 2e-57
Identities = 115/144 (79%), Positives = 127/144 (88%), Gaps = 2/144 (1%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPI--ETEDKEADQPVERPR 233
MADDDY D+D GY +EP EPE +EGAE E+ + N+D+ +P+ E E+K +PVERPR
Sbjct: 1 MADDDY-DMDGGYVDEPIEPEPDEGAEIEEDNGNNEDIP-DPLLGEGEEKTEQEPVERPR 58
Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413
+TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
Sbjct: 59 KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 118
Query: 414 DGSYEDWGVDELIVEDSWKRQVGG 485
DGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 119 DGSYEDWGVDELIVEDSWKRQVGG 142
[18][TOP]
>UniRef100_C5X5S2 Putative uncharacterized protein Sb02g011150 n=1 Tax=Sorghum
bicolor RepID=C5X5S2_SORBI
Length = 143
Score = 223 bits (569), Expect = 6e-57
Identities = 114/145 (78%), Positives = 125/145 (86%), Gaps = 2/145 (1%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDL--DAEPIETEDKEADQPVERPR 233
MADDDY ++DMGYE+EPPE EIEEGAEEE + N+D D E EDKE ++ + R R
Sbjct: 1 MADDDYNEMDMGYEDEPPEAEIEEGAEEE-LENNNEDTPDDVVGAEAEDKEQEK-IARAR 58
Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413
+T+KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLP
Sbjct: 59 KTTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 118
Query: 414 DGSYEDWGVDELIVEDSWKRQVGGD 488
DGSYEDW VDELIVEDSWKRQVGG+
Sbjct: 119 DGSYEDWSVDELIVEDSWKRQVGGE 143
[19][TOP]
>UniRef100_A3BJH6 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=A3BJH6_ORYSJ
Length = 177
Score = 218 bits (556), Expect = 2e-55
Identities = 115/177 (64%), Positives = 125/177 (70%), Gaps = 35/177 (19%)
Frame = +3
Query: 60 MADDDYEDIDMG-----------------------------------YEEEPPEPEIEEG 134
MA+DDY D+DMG YE+EPPEPEIEEG
Sbjct: 1 MAEDDYNDMDMGFASPPPSLARFRRYSFAPSLGFTGTRMSPQNLRLRYEDEPPEPEIEEG 60
Query: 135 AEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAP 314
AEEE P+ N+D + + ED + + RPR+TSKYMTKYERARILGTRALQISMNAP
Sbjct: 61 AEEE-PENNNEDAVDDVVGAEDDKEQEKTARPRKTSKYMTKYERARILGTRALQISMNAP 119
Query: 315 VMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 485
VMVELEGETDPLEIAMKELR RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 120 VMVELEGETDPLEIAMKELRARKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 176
[20][TOP]
>UniRef100_A9NU56 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NU56_PICSI
Length = 147
Score = 217 bits (553), Expect = 4e-55
Identities = 114/152 (75%), Positives = 125/152 (82%), Gaps = 9/152 (5%)
Frame = +3
Query: 60 MADDDYEDID---MGYEEEPPEPEIEEGA---EEEDPDKQNDDL---DAEPIETEDKEAD 212
MAD+DY D D +GYEEEPPEPEIEE EEE + D L D EP+E +
Sbjct: 1 MADEDYNDFDGGDVGYEEEPPEPEIEEEVAPEEEEHEEVPVDTLGGGDKEPVEQQ----- 55
Query: 213 QPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 392
+P ++PR+TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF
Sbjct: 56 RPSDKPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 115
Query: 393 TIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 488
TIRRYLPDGSYEDWGVDELIVEDSW+RQVGGD
Sbjct: 116 TIRRYLPDGSYEDWGVDELIVEDSWRRQVGGD 147
[21][TOP]
>UniRef100_C0PQI2 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=C0PQI2_PICSI
Length = 147
Score = 216 bits (550), Expect = 1e-54
Identities = 114/152 (75%), Positives = 124/152 (81%), Gaps = 9/152 (5%)
Frame = +3
Query: 60 MADDDYEDID---MGYEEEPPEPEIEEGA---EEEDPDKQNDDL---DAEPIETEDKEAD 212
MAD+DY D D +GYEEEPPEPEIEE EEE + D L D EP+E +
Sbjct: 1 MADEDYNDFDGGDVGYEEEPPEPEIEEEVAPEEEEHEEVPVDTLGGGDKEPVEQQ----- 55
Query: 213 QPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 392
+P ++PR+TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF
Sbjct: 56 RPSDKPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 115
Query: 393 TIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 488
TIRRYLPDGSYEDWGVDELIVEDSW RQVGGD
Sbjct: 116 TIRRYLPDGSYEDWGVDELIVEDSWTRQVGGD 147
[22][TOP]
>UniRef100_B9R9F9 DNA-directed RNA polymerase subunit rpb6, putative n=1 Tax=Ricinus
communis RepID=B9R9F9_RICCO
Length = 124
Score = 214 bits (544), Expect = 5e-54
Identities = 103/121 (85%), Positives = 111/121 (91%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISM 305
+EGAEE+ + N+D+ +PIETEDKE + ERPR+TSKYMTKYERARILGTRALQISM
Sbjct: 4 QEGAEEDVENNNNEDVPGDPIETEDKEEQEAAERPRKTSKYMTKYERARILGTRALQISM 63
Query: 306 NAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 485
NAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 64 NAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 123
Query: 486 D 488
D
Sbjct: 124 D 124
[23][TOP]
>UniRef100_A5AKW7 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5AKW7_VITVI
Length = 140
Score = 199 bits (505), Expect = 2e-49
Identities = 101/121 (83%), Positives = 109/121 (90%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISM 305
+EGAEE+ + N+D+ + IET +KE PVER R+TSKYMTKYERARILGTRALQISM
Sbjct: 22 DEGAEEDADNNNNEDIP-DAIETAEKE-QVPVERSRKTSKYMTKYERARILGTRALQISM 79
Query: 306 NAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 485
NAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 80 NAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 139
Query: 486 D 488
D
Sbjct: 140 D 140
[24][TOP]
>UniRef100_A9TB02 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TB02_PHYPA
Length = 119
Score = 179 bits (455), Expect = 1e-43
Identities = 89/121 (73%), Positives = 101/121 (83%)
Frame = +3
Query: 120 EIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQI 299
E+ EG EE D + D L+ + + A+ ++PR+T+KYMTKYERAR+LGTRALQI
Sbjct: 2 EVAEGDEENDDARDFDGLETDTLVDG---AEVRTDKPRKTTKYMTKYERARVLGTRALQI 58
Query: 300 SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 479
SMNAPVMV LEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSW+RQV
Sbjct: 59 SMNAPVMVNLEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWRRQV 118
Query: 480 G 482
G
Sbjct: 119 G 119
[25][TOP]
>UniRef100_B7PRL4 RNA polymerase subunit K, putative n=1 Tax=Ixodes scapularis
RepID=B7PRL4_IXOSC
Length = 129
Score = 155 bits (393), Expect = 2e-36
Identities = 81/134 (60%), Positives = 101/134 (75%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
MADD+YE D+G ++ + + +E +E D QNDD + E ++ D + Q + R T
Sbjct: 1 MADDEYEADDVGGGDDFDDVDEDENLDEID---QNDDENIELLQASDGQPQQ--NQKRIT 55
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
+ YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDG
Sbjct: 56 TMYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKARKIPIIIRRYLPDG 115
Query: 420 SYEDWGVDELIVED 461
SYEDWG+DELI+ D
Sbjct: 116 SYEDWGIDELIITD 129
[26][TOP]
>UniRef100_C4WSH1 ACYPI005782 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSH1_ACYPI
Length = 132
Score = 151 bits (381), Expect = 4e-35
Identities = 77/135 (57%), Positives = 102/135 (75%), Gaps = 1/135 (0%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR- 236
MAD++++ D G ++ + + E + P++ D++D PI+ EA V++ +R
Sbjct: 1 MADEEFDHDDGGADDFDEVEDDADLDELDQPEENEDNIDILPIQ----EAQSQVQKSKRI 56
Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416
T+KYMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL++RKIP IRRYLPD
Sbjct: 57 TTKYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKKRKIPIIIRRYLPD 116
Query: 417 GSYEDWGVDELIVED 461
SYEDWG+DELI+ D
Sbjct: 117 NSYEDWGIDELIIVD 131
[27][TOP]
>UniRef100_UPI000186D3E6 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide,
putative n=1 Tax=Pediculus humanus corporis
RepID=UPI000186D3E6
Length = 132
Score = 149 bits (377), Expect = 1e-34
Identities = 79/135 (58%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR- 236
M+DD Y+ D+G + + + ++ ED D+ DD DA + EA V + +R
Sbjct: 1 MSDDKYDTDDVGEDFD----DADDDDNAEDLDQPEDDADALDPGSISIEAKGSVAKSKRI 56
Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416
T+KYMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL++RKIP IRRYLPD
Sbjct: 57 TTKYMTKYERARVLGTRALQIAMGAPVMVELEGETDPLQIAMKELKQRKIPIIIRRYLPD 116
Query: 417 GSYEDWGVDELIVED 461
SYEDWG+DELI+ D
Sbjct: 117 HSYEDWGIDELIIID 131
[28][TOP]
>UniRef100_C1EBJ1 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EBJ1_9CHLO
Length = 138
Score = 147 bits (370), Expect = 7e-34
Identities = 76/139 (54%), Positives = 99/139 (71%), Gaps = 2/139 (1%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQP--VERPRRT 239
D DY+ D Y+ + P +++P+ ++ ++ +E + Q R T
Sbjct: 4 DGDYDGGDGAYDYDEP------AGGDDEPEAEDAEMPEGGVEVLEHAPQQGGGAVTERTT 57
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
+ YMTKYERARILGTRALQISMNAPV+V+L+GETDPLEIA KELRE++IPFT+RRYLPDG
Sbjct: 58 TPYMTKYERARILGTRALQISMNAPVLVQLDGETDPLEIAGKELREKRIPFTVRRYLPDG 117
Query: 420 SYEDWGVDELIVEDSWKRQ 476
S+EDWGVDELIVED +R+
Sbjct: 118 SWEDWGVDELIVEDPDRRR 136
[29][TOP]
>UniRef100_UPI00015B553F PREDICTED: similar to DNA-directed RNA polymerase subunit rpb6 n=1
Tax=Nasonia vitripennis RepID=UPI00015B553F
Length = 130
Score = 144 bits (363), Expect = 5e-33
Identities = 79/135 (58%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR- 236
MADD++E D+ E + E + E+++ D +N +L A EA V++ +R
Sbjct: 1 MADDEFEADDVADEFDDVEDDDNIELEQQEDDGENFELVAAG------EASGGVQKSKRI 54
Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416
T+ YMTKYERARILGTRALQISM APVMVELEGETDPL+IAMKEL++RKIP IRR+LPD
Sbjct: 55 TTGYMTKYERARILGTRALQISMCAPVMVELEGETDPLQIAMKELKQRKIPIIIRRFLPD 114
Query: 417 GSYEDWGVDELIVED 461
SYEDWG+DELI+ D
Sbjct: 115 HSYEDWGIDELIIID 129
[30][TOP]
>UniRef100_UPI000051A425 PREDICTED: similar to RNA polymerase II 18kD subunit CG1163-PA n=1
Tax=Apis mellifera RepID=UPI000051A425
Length = 130
Score = 143 bits (360), Expect = 1e-32
Identities = 78/143 (54%), Positives = 100/143 (69%), Gaps = 9/143 (6%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDK--------EADQ 215
MADDD++ +E A++ D +D+++ EP E + + EA
Sbjct: 1 MADDDFDG--------------DEVADDFDDVDDDDNIELEPQEEDGENIELLAAGEATG 46
Query: 216 PVERPRR-TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 392
V+R +R T++YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL++RKIP
Sbjct: 47 GVQRSKRITTRYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKQRKIPI 106
Query: 393 TIRRYLPDGSYEDWGVDELIVED 461
IRRYLPD SYEDWG+DELI+ D
Sbjct: 107 IIRRYLPDNSYEDWGIDELIIID 129
[31][TOP]
>UniRef100_Q7Q6F5 AGAP005873-PA n=1 Tax=Anopheles gambiae RepID=Q7Q6F5_ANOGA
Length = 131
Score = 143 bits (360), Expect = 1e-32
Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 2/136 (1%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDK-EADQPVERPRR 236
M D DY++ D+G +E ++ E+++ D+ N + D + IE + +A V + +R
Sbjct: 1 MDDGDYDNDDVGGDE------FDDVEEDDNIDELNQEEDGDNIEIINPGQAGGGVPKNKR 54
Query: 237 -TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413
T+KYMTKYERAR+LGTRALQI+M AP+MVELEGETDPL+IAMKEL++RKIP IRRYLP
Sbjct: 55 ITTKYMTKYERARVLGTRALQIAMCAPIMVELEGETDPLQIAMKELKQRKIPIIIRRYLP 114
Query: 414 DGSYEDWGVDELIVED 461
D SYEDW +DELI+ D
Sbjct: 115 DSSYEDWSIDELIIID 130
[32][TOP]
>UniRef100_UPI0000D563C0 PREDICTED: similar to AGAP005873-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D563C0
Length = 131
Score = 142 bits (357), Expect = 2e-32
Identities = 74/136 (54%), Positives = 100/136 (73%), Gaps = 2/136 (1%)
Frame = +3
Query: 60 MADDDYEDIDMG--YEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPR 233
M D++++ D+G ++++ + IEE E P+++ D++D I + + R
Sbjct: 1 MNDEEFDGDDVGDDFDDDVDDDNIEE---LEQPEEEGDNID---ILAHGQAGGGVPKNKR 54
Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413
T+KYMTKYERAR+LGTRALQI+M APVMVEL+GETDPL+IAMKEL++RKIP IRRYLP
Sbjct: 55 ITTKYMTKYERARVLGTRALQIAMCAPVMVELDGETDPLQIAMKELKQRKIPIIIRRYLP 114
Query: 414 DGSYEDWGVDELIVED 461
D SYEDWG+DELI+ D
Sbjct: 115 DHSYEDWGIDELIIID 130
[33][TOP]
>UniRef100_Q17F62 DNA-directed RNA polymerase subunit rpb6 n=1 Tax=Aedes aegypti
RepID=Q17F62_AEDAE
Length = 131
Score = 142 bits (357), Expect = 2e-32
Identities = 74/136 (54%), Positives = 98/136 (72%), Gaps = 2/136 (1%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIE--TEDKEADQPVERPR 233
M D DY++ D+G +E ++ E+++ D+ N + D + IE T + + R
Sbjct: 1 MDDGDYDNDDVGGDE------FDDVEEDDNIDELNQEEDGDNIELITPGQAGGGVPKSKR 54
Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413
T+KYMTKYERAR+LGTRALQI+M AP+MVELEGETDPL+IAMKEL++RKIP IRR+LP
Sbjct: 55 ITTKYMTKYERARVLGTRALQIAMCAPIMVELEGETDPLQIAMKELKQRKIPIIIRRFLP 114
Query: 414 DGSYEDWGVDELIVED 461
D SYEDW +DELI+ D
Sbjct: 115 DSSYEDWSIDELIIID 130
[34][TOP]
>UniRef100_B0XGQ1 DNA-directed RNA polymeraseI n=1 Tax=Culex quinquefasciatus
RepID=B0XGQ1_CULQU
Length = 131
Score = 142 bits (357), Expect = 2e-32
Identities = 74/136 (54%), Positives = 98/136 (72%), Gaps = 2/136 (1%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIE--TEDKEADQPVERPR 233
M D D+++ D+G +E ++ E+++ D+ N + D + IE T + + R
Sbjct: 1 MDDGDFDNDDVGGDE------FDDVEEDDNIDEINQEEDGDNIELITPGQSGGGVPKSKR 54
Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413
T+KYMTKYERAR+LGTRALQI+M AP+MVELEGETDPL+IAMKEL++RKIP IRRYLP
Sbjct: 55 ITTKYMTKYERARVLGTRALQIAMCAPIMVELEGETDPLQIAMKELKQRKIPIIIRRYLP 114
Query: 414 DGSYEDWGVDELIVED 461
D SYEDW +DELI+ D
Sbjct: 115 DASYEDWSIDELIIID 130
[35][TOP]
>UniRef100_UPI0000588F6C PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000588F6C
Length = 124
Score = 140 bits (354), Expect = 5e-32
Identities = 78/136 (57%), Positives = 97/136 (71%), Gaps = 1/136 (0%)
Frame = +3
Query: 54 LTMADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPR 233
+ + D+D++D D EP ++E EEE D D +D P A + V++
Sbjct: 7 IVLFDEDFDDGD--------EP-LDEANEEEADD--GDHIDVLP-------AGEGVQQTE 48
Query: 234 R-TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410
R T+ YMTKYERAR+LGTRALQI+MNAPVMVELEGETDPL+IAMKEL+ RKIP IRRYL
Sbjct: 49 RITTPYMTKYERARVLGTRALQIAMNAPVMVELEGETDPLQIAMKELKARKIPIIIRRYL 108
Query: 411 PDGSYEDWGVDELIVE 458
PDGSYEDWG DEL+++
Sbjct: 109 PDGSYEDWGCDELVID 124
[36][TOP]
>UniRef100_Q6DGS5 Zgc:92790 n=1 Tax=Danio rerio RepID=Q6DGS5_DANRE
Length = 127
Score = 140 bits (354), Expect = 5e-32
Identities = 75/132 (56%), Positives = 93/132 (70%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSK 245
D D++D+ E+E P ++E ED D++N ++ Q + R T++
Sbjct: 10 DGDFDDV----EDEEPLDDLEN---VEDEDQEN-------VQILPAGEGQQANQKRITTQ 55
Query: 246 YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSY 425
YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGSY
Sbjct: 56 YMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYLPDGSY 115
Query: 426 EDWGVDELIVED 461
EDWG DELI+ D
Sbjct: 116 EDWGCDELIITD 127
[37][TOP]
>UniRef100_Q4SCJ6 Chromosome undetermined SCAF14653, whole genome shotgun sequence
n=1 Tax=Tetraodon nigroviridis RepID=Q4SCJ6_TETNG
Length = 127
Score = 140 bits (354), Expect = 5e-32
Identities = 75/129 (58%), Positives = 90/129 (69%), Gaps = 8/129 (6%)
Frame = +3
Query: 99 EEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKE--------ADQPVERPRRTSKYMT 254
E+ + + ++G E+E D D E +E ED+E Q + R T+ YMT
Sbjct: 5 EDNFDDGDFDDGEEDEGLD------DLENVEDEDQENVQILPAGEGQQANQKRITTPYMT 58
Query: 255 KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 434
KYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGSYEDW
Sbjct: 59 KYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYLPDGSYEDW 118
Query: 435 GVDELIVED 461
G DELI+ D
Sbjct: 119 GCDELIITD 127
[38][TOP]
>UniRef100_C3YH75 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3YH75_BRAFL
Length = 129
Score = 140 bits (354), Expect = 5e-32
Identities = 74/131 (56%), Positives = 95/131 (72%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKY 248
DD++D D +++ + + EE +E D +Q D + + + D E P + + T+ Y
Sbjct: 3 DDFDDGDQ-FDDVGDDLDDEEPLDELDNVEQEGDENIDVLPAGDGE---PQQLQKITTPY 58
Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428
MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGS+E
Sbjct: 59 MTKYERARVLGTRALQIAMGAPVMVELEGETDPLHIAMKELKVRKIPIIIRRYLPDGSFE 118
Query: 429 DWGVDELIVED 461
DWG+DELI+ D
Sbjct: 119 DWGIDELIILD 129
[39][TOP]
>UniRef100_B8RJ41 DNA-directed RNA polymerase I n=1 Tax=Culex tarsalis
RepID=B8RJ41_CULTA
Length = 131
Score = 140 bits (353), Expect = 7e-32
Identities = 73/136 (53%), Positives = 98/136 (72%), Gaps = 2/136 (1%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIE--TEDKEADQPVERPR 233
M D D+++ D+G ++ ++ E+++ D+ N + D + IE T + + R
Sbjct: 1 MDDGDFDNDDVGGDD------FDDVEEDDNIDEINQEEDGDNIELITPGQAGGGVPKSKR 54
Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413
T+KYMTKYERAR+LGTRALQI+M AP+MVELEGETDPL+IAMKEL++RKIP IRRYLP
Sbjct: 55 ITTKYMTKYERARVLGTRALQIAMCAPIMVELEGETDPLQIAMKELKQRKIPIIIRRYLP 114
Query: 414 DGSYEDWGVDELIVED 461
D SYEDW +DELI+ D
Sbjct: 115 DASYEDWSIDELIIID 130
[40][TOP]
>UniRef100_A8QC94 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide,
putative n=1 Tax=Brugia malayi RepID=A8QC94_BRUMA
Length = 128
Score = 140 bits (353), Expect = 7e-32
Identities = 78/128 (60%), Positives = 93/128 (72%), Gaps = 7/128 (5%)
Frame = +3
Query: 99 EEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSK-------YMTK 257
E+E E E+E A++ ++Q DDLD EP E +D E Q VE +T+ +MTK
Sbjct: 3 EDEDYEGEME--ADDFGDEEQMDDLDLEPAE-DDTERIQVVEGSEKTASTERVTTPFMTK 59
Query: 258 YERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWG 437
YERARILGTRALQI+M APVMVELEGETDPLEIA KEL+ +KIP +RRYLPDGS+EDW
Sbjct: 60 YERARILGTRALQIAMGAPVMVELEGETDPLEIARKELKHQKIPLIVRRYLPDGSFEDWS 119
Query: 438 VDELIVED 461
VDEL V D
Sbjct: 120 VDELDVTD 127
[41][TOP]
>UniRef100_A5DQ74 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DQ74_PICGU
Length = 158
Score = 140 bits (352), Expect = 9e-32
Identities = 77/143 (53%), Positives = 96/143 (67%), Gaps = 13/143 (9%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIET-----ED--------KEA 209
DD++ D ++E EPE + A+ + D + D I ED KE
Sbjct: 16 DDFDQPDHFSDDEFQEPEGDNDAQAANGDVEMKAADGRTIVNGGLGPEDSLRRAKTAKEL 75
Query: 210 DQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIP 389
P E+ R T+ YMTKYERARILGTRALQIS+NAPV+V++EGETDPL+IAMKEL +RK+P
Sbjct: 76 SIPKEK-RTTTPYMTKYERARILGTRALQISLNAPVLVDIEGETDPLQIAMKELTQRKVP 134
Query: 390 FTIRRYLPDGSYEDWGVDELIVE 458
+RRYLPDGSYEDWG DELIV+
Sbjct: 135 LVVRRYLPDGSYEDWGCDELIVD 157
[42][TOP]
>UniRef100_UPI00016E7833 UPI00016E7833 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E7833
Length = 127
Score = 139 bits (351), Expect = 1e-31
Identities = 76/133 (57%), Positives = 93/133 (69%), Gaps = 1/133 (0%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQN-DDLDAEPIETEDKEADQPVERPRRTS 242
+D+++D D EE +EG + D +N +D D E ++ Q + R T+
Sbjct: 5 EDNFDDGDFDDAEE------DEGLD----DLENVEDEDQENVQILPAGEGQQANQKRITT 54
Query: 243 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 422
YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGS
Sbjct: 55 PYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYLPDGS 114
Query: 423 YEDWGVDELIVED 461
YEDWG DELI+ D
Sbjct: 115 YEDWGCDELIISD 127
[43][TOP]
>UniRef100_Q01F81 RNA polymerase subunit K (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q01F81_OSTTA
Length = 149
Score = 139 bits (350), Expect = 2e-31
Identities = 72/137 (52%), Positives = 90/137 (65%), Gaps = 12/137 (8%)
Frame = +3
Query: 87 DMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR---------- 236
D G + + +E +E++ D + D D I D+ D RR
Sbjct: 7 DYGDDVDDVVDALEAAEDEDERDLEGGDADGRVIVESDERGDALGTHGRRGTGGAVPRHL 66
Query: 237 --TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410
T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGETDPLEIA KELRE+++PF +RRYL
Sbjct: 67 RTTTPYMTKYERARVLGTRALQISMNAPVLVQLEGETDPLEIAGKELREKRVPFVVRRYL 126
Query: 411 PDGSYEDWGVDELIVED 461
PDGSYEDW ++ELIV D
Sbjct: 127 PDGSYEDWCIEELIVHD 143
[44][TOP]
>UniRef100_C1BL50 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide
n=1 Tax=Osmerus mordax RepID=C1BL50_OSMMO
Length = 127
Score = 139 bits (349), Expect = 2e-31
Identities = 71/123 (57%), Positives = 89/123 (72%), Gaps = 2/123 (1%)
Frame = +3
Query: 99 EEEPPEPEIEEGAEEEDPD--KQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERAR 272
E+ + + ++G E+E D + +D D E ++ Q + R T++YMTKYERAR
Sbjct: 5 EDNFDDGDFDDGEEDEGMDDLENAEDEDRENVQILPAGEGQQANQKRITTQYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPD SYEDWG DELI
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLQIAMKELKGRKIPIIIRRYLPDASYEDWGCDELI 124
Query: 453 VED 461
+ D
Sbjct: 125 ITD 127
[45][TOP]
>UniRef100_A3LVF6 Subunit common to RNA polymerases I, II, and III n=1 Tax=Pichia
stipitis RepID=A3LVF6_PICST
Length = 157
Score = 139 bits (349), Expect = 2e-31
Identities = 73/140 (52%), Positives = 92/140 (65%), Gaps = 10/140 (7%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERP------ 230
DD++ D E++ EPE E + + +D A+QP ++
Sbjct: 17 DDFDQPDHFSEDDFQEPEGEANGDATMKTADGKTIINGGFGPDDASANQPRQKTAKELAI 76
Query: 231 ----RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTI 398
R T+ YMTKYERAR+LGTRALQIS+NAPV+V++EGETDPL+IAMKEL +RKIP I
Sbjct: 77 PKEKRTTTPYMTKYERARVLGTRALQISLNAPVLVDIEGETDPLQIAMKELAQRKIPLVI 136
Query: 399 RRYLPDGSYEDWGVDELIVE 458
RRYLPDGSYEDWG DELIV+
Sbjct: 137 RRYLPDGSYEDWGCDELIVD 156
[46][TOP]
>UniRef100_B5G123 Putative DNA directed RNA polymerase II polypeptide F variant 2 n=1
Tax=Taeniopygia guttata RepID=B5G123_TAEGU
Length = 127
Score = 138 bits (348), Expect = 3e-31
Identities = 73/123 (59%), Positives = 87/123 (70%), Gaps = 11/123 (8%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE-----------RPRRTSKYMTKYERAR 272
E+ + +D D +D E +E ++E + VE + R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLEDLENAEEEGQENVEILPSGERQQANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124
Query: 453 VED 461
+ D
Sbjct: 125 ITD 127
[47][TOP]
>UniRef100_UPI00005ED52B PREDICTED: similar to RNA Polymerase II subunit 14.4 kD n=1
Tax=Monodelphis domestica RepID=UPI00005ED52B
Length = 127
Score = 138 bits (347), Expect = 3e-31
Identities = 76/133 (57%), Positives = 93/133 (69%), Gaps = 1/133 (0%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEE-EDPDKQNDDLDAEPIETEDKEADQPVERPRRTS 242
+D+Y+ D EE +EG ++ E+P+++ E +E Q + R T+
Sbjct: 5 EDNYDGDDFDDVEE------DEGLDDLENPEEEGQ----ENVEILPSGERQQANQKRITT 54
Query: 243 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 422
YMTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGS
Sbjct: 55 PYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGS 114
Query: 423 YEDWGVDELIVED 461
YEDWGVDELI+ D
Sbjct: 115 YEDWGVDELIITD 127
[48][TOP]
>UniRef100_C3KHY7 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1
Tax=Anoplopoma fimbria RepID=C3KHY7_9PERC
Length = 127
Score = 138 bits (347), Expect = 3e-31
Identities = 76/133 (57%), Positives = 92/133 (69%), Gaps = 1/133 (0%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQN-DDLDAEPIETEDKEADQPVERPRRTS 242
+D+++D D EE +EG + D +N +D D E ++ Q R T+
Sbjct: 5 EDNFDDGDFDDAEE------DEGLD----DLENVEDGDRENVQILPAGEGQQANAKRITT 54
Query: 243 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 422
YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGS
Sbjct: 55 PYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYLPDGS 114
Query: 423 YEDWGVDELIVED 461
YEDWG DELI+ D
Sbjct: 115 YEDWGCDELIITD 127
[49][TOP]
>UniRef100_Q3TN04 Putative uncharacterized protein n=1 Tax=Mus musculus
RepID=Q3TN04_MOUSE
Length = 127
Score = 138 bits (347), Expect = 3e-31
Identities = 74/123 (60%), Positives = 88/123 (71%), Gaps = 11/123 (8%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272
E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQASQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124
Query: 453 VED 461
+ D
Sbjct: 125 ISD 127
[50][TOP]
>UniRef100_C1MWD5 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MWD5_9CHLO
Length = 84
Score = 138 bits (347), Expect = 3e-31
Identities = 65/82 (79%), Positives = 76/82 (92%)
Frame = +3
Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410
R T+ YMTKYERARILGTRALQISMNAPV+V+L+GETDPLEIA KELRE++IPFT+RRYL
Sbjct: 1 RTTTPYMTKYERARILGTRALQISMNAPVLVQLDGETDPLEIAGKELREKRIPFTVRRYL 60
Query: 411 PDGSYEDWGVDELIVEDSWKRQ 476
PDGS+EDW VDELI+ED +R+
Sbjct: 61 PDGSFEDWSVDELIIEDPDRRR 82
[51][TOP]
>UniRef100_P61219 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=2
Tax=Murinae RepID=RPAB2_MOUSE
Length = 127
Score = 138 bits (347), Expect = 3e-31
Identities = 74/123 (60%), Positives = 88/123 (71%), Gaps = 11/123 (8%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272
E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124
Query: 453 VED 461
+ D
Sbjct: 125 ISD 127
[52][TOP]
>UniRef100_P61218 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=3
Tax=Euarchontoglires RepID=RPAB2_HUMAN
Length = 127
Score = 137 bits (346), Expect = 4e-31
Identities = 74/123 (60%), Positives = 88/123 (71%), Gaps = 11/123 (8%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272
E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124
Query: 453 VED 461
+ D
Sbjct: 125 ITD 127
[53][TOP]
>UniRef100_Q17684 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2
n=1 Tax=Caenorhabditis elegans RepID=RPAB2_CAEEL
Length = 137
Score = 137 bits (346), Expect = 4e-31
Identities = 75/137 (54%), Positives = 94/137 (68%), Gaps = 3/137 (2%)
Frame = +3
Query: 60 MAD-DDYEDIDMG--YEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERP 230
MAD DDY+D+D ++ E IEE + D + ++DD E E D+ P
Sbjct: 1 MADEDDYQDMDNDDFVDDNEMEDVIEEDPQRPDNEDEDDDNVDENFELFDQGKAVPTSE- 59
Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410
T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPLEIA KEL++R+IP +RRYL
Sbjct: 60 HVTTPFMTKYERARVLGTRALQIAMGAPVMVELEGETDPLEIARKELKQRRIPIIVRRYL 119
Query: 411 PDGSYEDWGVDELIVED 461
PDGSYEDW D+L + D
Sbjct: 120 PDGSYEDWPTDQLQLAD 136
[54][TOP]
>UniRef100_UPI0001560797 PREDICTED: similar to DNA directed RNA polymerase II polypeptide F
n=1 Tax=Equus caballus RepID=UPI0001560797
Length = 127
Score = 137 bits (345), Expect = 6e-31
Identities = 74/123 (60%), Positives = 88/123 (71%), Gaps = 11/123 (8%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272
E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLEKAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124
Query: 453 VED 461
+ D
Sbjct: 125 ITD 127
[55][TOP]
>UniRef100_UPI0000EDD2AA PREDICTED: similar to RNA Polymerase II subunit 14.4 kD n=1
Tax=Ornithorhynchus anatinus RepID=UPI0000EDD2AA
Length = 127
Score = 137 bits (345), Expect = 6e-31
Identities = 72/123 (58%), Positives = 87/123 (70%), Gaps = 11/123 (8%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE-----------RPRRTSKYMTKYERAR 272
E+ + +D D +D + +E ++E + VE + R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERQQANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124
Query: 453 VED 461
+ D
Sbjct: 125 ITD 127
[56][TOP]
>UniRef100_Q6DDA6 Polymerase (RNA) II (DNA directed) polypeptide F n=2 Tax=Xenopus
(Silurana) tropicalis RepID=Q6DDA6_XENTR
Length = 127
Score = 137 bits (345), Expect = 6e-31
Identities = 72/114 (63%), Positives = 84/114 (73%), Gaps = 6/114 (5%)
Frame = +3
Query: 138 EEEDPDKQNDDLDAEPIETEDKEA------DQPVERPRRTSKYMTKYERARILGTRALQI 299
++ + D+ DDLD E ++ A Q + R T+ YMTKYERAR+LGTRALQI
Sbjct: 14 DDVEEDEGLDDLDNAEEEDQENVAILPAGEGQQANQKRITTNYMTKYERARVLGTRALQI 73
Query: 300 SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 461
+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI+ D
Sbjct: 74 AMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 127
[57][TOP]
>UniRef100_C1C4U6 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=2
Tax=Anura RepID=C1C4U6_RANCA
Length = 127
Score = 137 bits (345), Expect = 6e-31
Identities = 74/116 (63%), Positives = 85/116 (73%), Gaps = 8/116 (6%)
Frame = +3
Query: 138 EEEDPDKQNDDLDAEPIETEDKE--------ADQPVERPRRTSKYMTKYERARILGTRAL 293
++ + D+ DDLD E ED+E Q + R T+ YMTKYERAR+LGTRAL
Sbjct: 14 DDVEEDEGLDDLDNA--EEEDRENVAILPAGEGQQANQKRITTNYMTKYERARVLGTRAL 71
Query: 294 QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 461
QI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI+ D
Sbjct: 72 QIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 127
[58][TOP]
>UniRef100_C4Y9V4 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y9V4_CLAL4
Length = 156
Score = 137 bits (345), Expect = 6e-31
Identities = 75/150 (50%), Positives = 94/150 (62%), Gaps = 9/150 (6%)
Frame = +3
Query: 39 FNSLPLTMADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQN---------DDLDAEPIE 191
+N P D D D E P+P + + + ++ + DA+
Sbjct: 8 YNEAPENFEDFDAPDHFSDDEFADPDPVSHQNGNDAEMKAEDGRTIVHGGYSEADAQVRV 67
Query: 192 TEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKEL 371
KE P E R T+ YMTKYERAR+LGTRALQIS+NAPV+V++EGETDPL+IAMKEL
Sbjct: 68 KTTKELAIPKE-DRTTTPYMTKYERARVLGTRALQISLNAPVLVDIEGETDPLQIAMKEL 126
Query: 372 RERKIPFTIRRYLPDGSYEDWGVDELIVED 461
+RKIP IRRYLPDGSYEDWG DELI+E+
Sbjct: 127 AQRKIPLVIRRYLPDGSYEDWGCDELIIEN 156
[59][TOP]
>UniRef100_Q9PT88 RNA polymerase common subunit RPB6 n=2 Tax=Gallus gallus
RepID=Q9PT88_CHICK
Length = 127
Score = 137 bits (344), Expect = 8e-31
Identities = 72/123 (58%), Positives = 87/123 (70%), Gaps = 11/123 (8%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE-----------RPRRTSKYMTKYERAR 272
E+ + +D D +D + +E ++E + VE + R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENVEEEGQENVEILPSGERQAANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124
Query: 453 VED 461
+ D
Sbjct: 125 ITD 127
[60][TOP]
>UniRef100_B9ENN4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1
Tax=Salmo salar RepID=B9ENN4_SALSA
Length = 127
Score = 137 bits (344), Expect = 8e-31
Identities = 77/132 (58%), Positives = 93/132 (70%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSK 245
+ DY+D D EE + E E+ED +++ P E +A+Q R T++
Sbjct: 5 EGDYDDGDFDDAEEDEGLDDLENVEDED----QENVKILPAG-EGSQANQK----RITTQ 55
Query: 246 YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSY 425
YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGSY
Sbjct: 56 YMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKCRKIPIIIRRYLPDGSY 115
Query: 426 EDWGVDELIVED 461
EDWG DELI+ D
Sbjct: 116 EDWGCDELIITD 127
[61][TOP]
>UniRef100_C5M8H0 DNA-directed RNA polymerases I n=1 Tax=Candida tropicalis MYA-3404
RepID=C5M8H0_CANTT
Length = 213
Score = 137 bits (344), Expect = 8e-31
Identities = 75/141 (53%), Positives = 96/141 (68%), Gaps = 5/141 (3%)
Frame = +3
Query: 51 PLTMADDDYEDI-----DMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQ 215
P +D++Y+D D + I G +D + N ++PI+ +E
Sbjct: 77 PDHFSDNEYDDPTQNGGDAALQTTDGRTIINGGFGPDDAAQAN----SQPIKKTTRELAI 132
Query: 216 PVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 395
P ++ R T+ YMTKYERARILGTRALQIS+NAPV+V++EGETDPL+IAMKEL +RKIP
Sbjct: 133 PKDK-RTTTPYMTKYERARILGTRALQISLNAPVLVDIEGETDPLQIAMKELAQRKIPLV 191
Query: 396 IRRYLPDGSYEDWGVDELIVE 458
IRRYLPDGSYEDWG DELIV+
Sbjct: 192 IRRYLPDGSYEDWGCDELIVD 212
[62][TOP]
>UniRef100_B2R4H6 cDNA, FLJ92093, highly similar to Homo sapiens polymerase (RNA) II
(DNA directed) polypeptide F (POLR2F), mRNA n=1 Tax=Homo
sapiens RepID=B2R4H6_HUMAN
Length = 127
Score = 136 bits (343), Expect = 1e-30
Identities = 74/123 (60%), Positives = 87/123 (70%), Gaps = 11/123 (8%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272
E+ + +D D +D + +E +E + VE RP R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAKEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124
Query: 453 VED 461
+ D
Sbjct: 125 ITD 127
[63][TOP]
>UniRef100_UPI00004A5242 PREDICTED: similar to DNA directed RNA polymerase II polypeptide F
isoform 1 n=1 Tax=Canis lupus familiaris
RepID=UPI00004A5242
Length = 127
Score = 136 bits (342), Expect = 1e-30
Identities = 74/123 (60%), Positives = 87/123 (70%), Gaps = 11/123 (8%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272
E+ + +D D +D +E ++E + VE RP R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLGDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124
Query: 453 VED 461
+ D
Sbjct: 125 ITD 127
[64][TOP]
>UniRef100_B9ELF2 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1
Tax=Salmo salar RepID=B9ELF2_SALSA
Length = 127
Score = 136 bits (342), Expect = 1e-30
Identities = 74/125 (59%), Positives = 91/125 (72%), Gaps = 9/125 (7%)
Frame = +3
Query: 114 EPEIEEGA-EEEDPDKQNDDLDAEPIETEDKE--------ADQPVERPRRTSKYMTKYER 266
E + ++G ++ + D+ DDL E +E ED+E + R T++YMTKYER
Sbjct: 5 EGDFDDGDFDDAEEDEGLDDL--ENVEDEDQENVKILPAGEGSQANQKRITTQYMTKYER 62
Query: 267 ARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDE 446
AR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGSYEDWG DE
Sbjct: 63 ARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKCRKIPIIIRRYLPDGSYEDWGCDE 122
Query: 447 LIVED 461
LI+ D
Sbjct: 123 LIITD 127
[65][TOP]
>UniRef100_Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1
Tax=Bos taurus RepID=RPAB2_BOVIN
Length = 127
Score = 136 bits (342), Expect = 1e-30
Identities = 74/123 (60%), Positives = 87/123 (70%), Gaps = 11/123 (8%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272
E+ + +D D +D + +E ++E VE RP R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQVNVEILPSGERPQANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124
Query: 453 VED 461
+ D
Sbjct: 125 ITD 127
[66][TOP]
>UniRef100_Q2F660 DNA-directed RNA polymerase subunit 6-like protein n=1 Tax=Bombyx
mori RepID=Q2F660_BOMMO
Length = 132
Score = 135 bits (341), Expect = 2e-30
Identities = 77/137 (56%), Positives = 96/137 (70%), Gaps = 3/137 (2%)
Frame = +3
Query: 60 MADDDYEDIDMG--YEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPR 233
MAD++YE D G Y++ E + E EE++ D N A +A V++ +
Sbjct: 1 MADEEYEADDGGADYDDIAEEDDNIEETEEQEEDGYNVQCLAWG------QAGGGVDKSK 54
Query: 234 R-TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410
R T++YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ KIP IRRYL
Sbjct: 55 RITTRYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKHGKIPIIIRRYL 114
Query: 411 PDGSYEDWGVDELIVED 461
PD SYEDW +DELI+ D
Sbjct: 115 PDHSYEDWSIDELIIID 131
[67][TOP]
>UniRef100_Q59QT0 DNA-directed RNA polymerases I n=1 Tax=Candida albicans
RepID=Q59QT0_CANAL
Length = 157
Score = 135 bits (341), Expect = 2e-30
Identities = 70/100 (70%), Positives = 81/100 (81%), Gaps = 2/100 (2%)
Frame = +3
Query: 165 DDLDA--EPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGE 338
DD A +P + KE P E+ R T+ YMTKYERARILGTRALQIS+NAPV+V++EGE
Sbjct: 58 DDAQAAGQPRKKTTKELAIPKEK-RTTTPYMTKYERARILGTRALQISLNAPVLVDIEGE 116
Query: 339 TDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
TDPL+IAMKEL +RKIP IRRYLPDGSYEDWG DELIV+
Sbjct: 117 TDPLQIAMKELAQRKIPLVIRRYLPDGSYEDWGCDELIVD 156
[68][TOP]
>UniRef100_B9WHP7 RNA polymerase subunit common to RNA polymerases I, II, and III,
putative n=1 Tax=Candida dubliniensis CD36
RepID=B9WHP7_CANDC
Length = 157
Score = 135 bits (340), Expect = 2e-30
Identities = 67/94 (71%), Positives = 79/94 (84%)
Frame = +3
Query: 177 AEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEI 356
++P + KE P E+ R T+ YMTKYERARILGTRALQIS+NAPV+V++EGETDPL+I
Sbjct: 64 SQPRKKTTKELAIPKEK-RTTTPYMTKYERARILGTRALQISLNAPVLVDIEGETDPLQI 122
Query: 357 AMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
AMKEL +RKIP IRRYLPDGSYEDWG DELIV+
Sbjct: 123 AMKELAQRKIPLVIRRYLPDGSYEDWGCDELIVD 156
[69][TOP]
>UniRef100_A8WSV7 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2
n=1 Tax=Caenorhabditis briggsae RepID=RPAB2_CAEBR
Length = 138
Score = 135 bits (340), Expect = 2e-30
Identities = 72/135 (53%), Positives = 94/135 (69%), Gaps = 3/135 (2%)
Frame = +3
Query: 66 DDDYEDIDMG--YEEEPPEPEIEEGAEEEDPDKQNDDLDA-EPIETEDKEADQPVERPRR 236
DDDY+D+D ++ E IEE + D ++++DD + E E D+ P
Sbjct: 4 DDDYQDMDNDDFVDDNEMEDVIEEEQQRPDHEEEDDDNNVDENFELFDQGKAVPTSE-HV 62
Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416
T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPLEIA KEL++R++P IRRYLPD
Sbjct: 63 TTPFMTKYERARVLGTRALQIAMGAPVMVELEGETDPLEIARKELKQRRVPIIIRRYLPD 122
Query: 417 GSYEDWGVDELIVED 461
GSYEDW ++L + D
Sbjct: 123 GSYEDWPTEQLQLAD 137
[70][TOP]
>UniRef100_UPI000180D2B9 PREDICTED: similar to DNA directed RNA polymerase II polypeptide F
n=1 Tax=Ciona intestinalis RepID=UPI000180D2B9
Length = 128
Score = 135 bits (339), Expect = 3e-30
Identities = 69/117 (58%), Positives = 89/117 (76%), Gaps = 6/117 (5%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDA-----EPIETEDKEADQPVERPRR-TSKYMTKYERARILGTR 287
++G + +D N+ LDA + +E D + +E +R T+ Y+TKYERAR+LGTR
Sbjct: 13 DDGGDMDDVGDANE-LDAVEDEGQGVEILDATEGRQIEPTKRITTPYLTKYERARVLGTR 71
Query: 288 ALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
ALQ+SMNAPVMVELEGETDPL+IAMKEL+ +KIP IRRY+PDGSYEDW +DELI+E
Sbjct: 72 ALQLSMNAPVMVELEGETDPLQIAMKELKAKKIPIIIRRYMPDGSYEDWAIDELIIE 128
[71][TOP]
>UniRef100_C1BXK5 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1
Tax=Esox lucius RepID=C1BXK5_ESOLU
Length = 127
Score = 135 bits (339), Expect = 3e-30
Identities = 74/125 (59%), Positives = 91/125 (72%), Gaps = 9/125 (7%)
Frame = +3
Query: 114 EPEIEEGA-EEEDPDKQNDDLDAEPIETEDKEADQ--------PVERPRRTSKYMTKYER 266
E + ++G ++ + D+ DDL E +E +D+E Q + R T+ YMTKYER
Sbjct: 5 EGDFDDGDFDDAEEDEGLDDL--ENVEDDDQENVQILPAGEGSQANQKRITTPYMTKYER 62
Query: 267 ARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDE 446
AR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGSYEDWG DE
Sbjct: 63 ARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKCRKIPIIIRRYLPDGSYEDWGCDE 122
Query: 447 LIVED 461
LI+ D
Sbjct: 123 LIITD 127
[72][TOP]
>UniRef100_B4JSM8 GH17834 n=1 Tax=Drosophila grimshawi RepID=B4JSM8_DROGR
Length = 131
Score = 135 bits (339), Expect = 3e-30
Identities = 71/137 (51%), Positives = 98/137 (71%), Gaps = 2/137 (1%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPD-KQNDDLDAEPIETEDKEADQPVERPRR 236
M + DY++ D+G ++ ++ E+ D D Q +++D I A V + +R
Sbjct: 1 MDEGDYDNDDVGNDD------FDDADEDVDEDIAQEEEVDNIEIIAPGGTAGGGVPKSKR 54
Query: 237 -TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413
T+KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRRYLP
Sbjct: 55 ITTKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLP 114
Query: 414 DGSYEDWGVDELIVEDS 464
D SYEDW +DEL++ D+
Sbjct: 115 DHSYEDWSIDELVMVDN 131
[73][TOP]
>UniRef100_Q6C2U5 YALI0F05082p n=1 Tax=Yarrowia lipolytica RepID=Q6C2U5_YARLI
Length = 152
Score = 135 bits (339), Expect = 3e-30
Identities = 72/139 (51%), Positives = 94/139 (67%), Gaps = 12/139 (8%)
Frame = +3
Query: 78 EDIDMGYEEEPPE--PEIEEGAEEEDPDKQNDD---LDAEPIETEDKEADQPVERP---- 230
++ + YEEE E ++EE EE D D ++ E +E +K + R
Sbjct: 13 DNFENAYEEEFEEHVSDVEENGEEVKTDVAEDGRQIVNGEGVENFEKAVRRKTVRELAIP 72
Query: 231 ---RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 401
R T+ YMTKYERAR+LGTRALQISMNAP++V++E TDPL+IAMKEL+++KIP IR
Sbjct: 73 REERTTTPYMTKYERARVLGTRALQISMNAPILVDIENATDPLQIAMKELQQKKIPLVIR 132
Query: 402 RYLPDGSYEDWGVDELIVE 458
RYLPDGS+EDWG DELIV+
Sbjct: 133 RYLPDGSFEDWGCDELIVD 151
[74][TOP]
>UniRef100_UPI0001A2CF73 hypothetical protein LOC436817 n=1 Tax=Danio rerio
RepID=UPI0001A2CF73
Length = 97
Score = 134 bits (338), Expect = 4e-30
Identities = 66/96 (68%), Positives = 76/96 (79%)
Frame = +3
Query: 174 DAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLE 353
D E ++ Q + R T++YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+
Sbjct: 2 DQENVQILPAGEGQQANQKRITTQYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQ 61
Query: 354 IAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 461
IAMKEL+ RKIP IRRYLPDGSYEDWG DELI+ D
Sbjct: 62 IAMKELKSRKIPIIIRRYLPDGSYEDWGCDELIITD 97
[75][TOP]
>UniRef100_C3KH99 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1
Tax=Anoplopoma fimbria RepID=C3KH99_9PERC
Length = 127
Score = 134 bits (338), Expect = 4e-30
Identities = 74/133 (55%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQN-DDLDAEPIETEDKEADQPVERPRRTS 242
+D+++D D EE +EG + D +N +D D E ++ Q R T+
Sbjct: 5 EDNFDDGDFDDAEE------DEGLD----DLENVEDGDRENVQILPAGEGQQANAKRITT 54
Query: 243 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 422
YMTKYERAR+LGTRALQI+ APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGS
Sbjct: 55 PYMTKYERARVLGTRALQIATCAPVMVELEGETDPLQIAMKELKSRKIPTIIRRYLPDGS 114
Query: 423 YEDWGVDELIVED 461
YEDWG DEL++ D
Sbjct: 115 YEDWGCDELVITD 127
[76][TOP]
>UniRef100_B8C3F5 Dna-directed RNA polymerase i (Fragment) n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C3F5_THAPS
Length = 76
Score = 134 bits (338), Expect = 4e-30
Identities = 63/76 (82%), Positives = 72/76 (94%)
Frame = +3
Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410
R T++Y+TKYERAR+LGTRALQISMNAPVMV+LEGETDPL+IA KELRERKIP IRRYL
Sbjct: 1 RITTRYLTKYERARVLGTRALQISMNAPVMVDLEGETDPLKIAQKELRERKIPIVIRRYL 60
Query: 411 PDGSYEDWGVDELIVE 458
PDGS+EDWG+DELIV+
Sbjct: 61 PDGSHEDWGIDELIVD 76
[77][TOP]
>UniRef100_A4RSJ5 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RSJ5_OSTLU
Length = 81
Score = 134 bits (338), Expect = 4e-30
Identities = 62/75 (82%), Positives = 71/75 (94%)
Frame = +3
Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410
R T+ YMTKYERARILGTRALQISMNAPV+V+LEGETDPLEIA KELRE+++PF +RRY+
Sbjct: 7 RTTTPYMTKYERARILGTRALQISMNAPVLVQLEGETDPLEIAGKELREKRVPFVVRRYM 66
Query: 411 PDGSYEDWGVDELIV 455
PDGSYEDWG+DELIV
Sbjct: 67 PDGSYEDWGIDELIV 81
[78][TOP]
>UniRef100_B3LZJ3 GF17248 n=1 Tax=Drosophila ananassae RepID=B3LZJ3_DROAN
Length = 131
Score = 134 bits (338), Expect = 4e-30
Identities = 71/137 (51%), Positives = 103/137 (75%), Gaps = 2/137 (1%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEE-DPDKQNDDLDAEPIETEDKEADQPVERPRR 236
M D +Y++ D+G ++ +++E +E+ +P+++ D+++ I A V + +R
Sbjct: 1 MDDGEYDNDDVGGDDFD---DVDEDVDEDINPEEEVDNIE---IIAPGGAAGGGVPKSKR 54
Query: 237 -TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413
T+KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRRYLP
Sbjct: 55 ITTKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLP 114
Query: 414 DGSYEDWGVDELIVEDS 464
D SYEDW +DELI+ D+
Sbjct: 115 DHSYEDWSIDELIMVDN 131
[79][TOP]
>UniRef100_Q1DXT5 Putative uncharacterized protein n=1 Tax=Coccidioides immitis
RepID=Q1DXT5_COCIM
Length = 142
Score = 134 bits (338), Expect = 4e-30
Identities = 69/137 (50%), Positives = 98/137 (71%), Gaps = 10/137 (7%)
Frame = +3
Query: 72 DYEDID-MGYEEEPPEPEIEEGAEEE--DPDKQNDDL-------DAEPIETEDKEADQPV 221
D+ED D G++ EPPE + + E+ P+++ ++ D +P+ + +E P
Sbjct: 7 DHEDRDETGFDYEPPEYDYIDNEPEDYVSPEQEAEEGAYAVLNGDGQPVMLQQREKKVPN 66
Query: 222 ERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 401
++ R T+ YMTKYERAR+LGTRALQISMNAP++V+LEGETDPL+IA+KEL ++KIP +R
Sbjct: 67 DQ-RTTTPYMTKYERARVLGTRALQISMNAPILVDLEGETDPLQIALKELNQKKIPLIVR 125
Query: 402 RYLPDGSYEDWGVDELI 452
RYLPDG YEDW +EL+
Sbjct: 126 RYLPDGWYEDWTCEELL 142
[80][TOP]
>UniRef100_UPI00004EEF96 PREDICTED: similar to DNA directed RNA polymerase II polypeptide F
n=1 Tax=Bos taurus RepID=UPI00004EEF96
Length = 127
Score = 134 bits (337), Expect = 5e-30
Identities = 72/121 (59%), Positives = 87/121 (71%), Gaps = 11/121 (9%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272
E+ + +D D +D + +E ++E + VE RP R T+ YMTKYE+AR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYEQAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124
Query: 453 V 455
+
Sbjct: 125 I 125
[81][TOP]
>UniRef100_C3KI93 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1
Tax=Anoplopoma fimbria RepID=C3KI93_9PERC
Length = 127
Score = 134 bits (337), Expect = 5e-30
Identities = 72/132 (54%), Positives = 90/132 (68%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSK 245
+D+++D D EE + +++ ED D++N ++ Q R T+
Sbjct: 5 EDNFDDGDFDDAEE--DGGLDDLENVEDGDREN-------VQILPAGEGQQANAKRITTP 55
Query: 246 YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSY 425
YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRY PDGSY
Sbjct: 56 YMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYPPDGSY 115
Query: 426 EDWGVDELIVED 461
EDWG DELI+ D
Sbjct: 116 EDWGCDELIITD 127
[82][TOP]
>UniRef100_Q296B8 GA11109 n=2 Tax=pseudoobscura subgroup RepID=Q296B8_DROPS
Length = 131
Score = 133 bits (335), Expect = 8e-30
Identities = 70/136 (51%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEE-DPDKQNDDLDAEPIETEDKEADQPVERPRR 236
M ++DY + D+G ++ +++E +E+ +P+++ D++ E I + R
Sbjct: 1 MDEEDYGNDDVGGDDFD---DVDEDVDEDINPEEEADNI--EIIAPGGTGGGGVPKSKRI 55
Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416
T+KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRRYLPD
Sbjct: 56 TTKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLPD 115
Query: 417 GSYEDWGVDELIVEDS 464
SYEDW +DELI+ D+
Sbjct: 116 HSYEDWSIDELIMVDN 131
[83][TOP]
>UniRef100_Q6BPY7 DEHA2E09812p n=1 Tax=Debaryomyces hansenii RepID=Q6BPY7_DEBHA
Length = 158
Score = 133 bits (334), Expect = 1e-29
Identities = 70/141 (49%), Positives = 94/141 (66%), Gaps = 11/141 (7%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIE-EGAEEEDPDKQ--------NDDLDAEPIETEDKEADQPV 221
+D++ D E++ EP E E D + + N L + ++ K A +
Sbjct: 17 EDFDQADHFSEDDFNEPAAENENVNNGDVEMKATDGRTIINGGLGPDEVQPRPKSARELA 76
Query: 222 --ERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 395
+ R T+ YMTKYERAR+LGTRALQIS+NAPV+V++EGETDPL+IAMKEL +RKIP
Sbjct: 77 VPKEDRTTTPYMTKYERARVLGTRALQISLNAPVLVDIEGETDPLQIAMKELAQRKIPLV 136
Query: 396 IRRYLPDGSYEDWGVDELIVE 458
+RRYLPDGS+EDWG DELI++
Sbjct: 137 VRRYLPDGSFEDWGCDELIID 157
[84][TOP]
>UniRef100_Q24320 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=3
Tax=melanogaster subgroup RepID=RPAB2_DROME
Length = 131
Score = 133 bits (334), Expect = 1e-29
Identities = 70/135 (51%), Positives = 96/135 (71%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
M D DY++ D+G ++ +++E +E+ ++ D + E I + R T
Sbjct: 1 MDDADYDNDDVGGDDFD---DVDEDVDEDINQEEEAD-NIEIIAPGGAGGGGVPKSKRIT 56
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
+KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRRYLPD
Sbjct: 57 TKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLPDH 116
Query: 420 SYEDWGVDELIVEDS 464
SYEDW +DELI+ D+
Sbjct: 117 SYEDWSIDELIMVDN 131
[85][TOP]
>UniRef100_C4R1V1 RNA polymerase subunit ABC23, common to RNA polymerases I, II, and
III n=1 Tax=Pichia pastoris GS115 RepID=C4R1V1_PICPG
Length = 155
Score = 132 bits (333), Expect = 1e-29
Identities = 62/81 (76%), Positives = 73/81 (90%)
Frame = +3
Query: 219 VERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTI 398
++ R T+ Y+TKYERARILGTRALQISMNAPV+V++EGETDPL+IAMKEL +RKIP I
Sbjct: 75 LKEERTTTPYLTKYERARILGTRALQISMNAPVLVDIEGETDPLQIAMKELSQRKIPLVI 134
Query: 399 RRYLPDGSYEDWGVDELIVED 461
RRYLPDGSYEDWG DELIV++
Sbjct: 135 RRYLPDGSYEDWGCDELIVDN 155
[86][TOP]
>UniRef100_Q54FA8 DNA-directed RNA polymerases I, II, and III subunit rpabc2 n=1
Tax=Dictyostelium discoideum RepID=RPAB2_DICDI
Length = 133
Score = 132 bits (333), Expect = 1e-29
Identities = 72/133 (54%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEG-AEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR 236
MAD + D GYEE EE EE + + D+ + EA + R+
Sbjct: 1 MADFEGGGDDGGYEEFDEGGGFEEEYVEETETTEAYTDIIDPSADANTAEAGRIPNHLRK 60
Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416
T++YMTKYERAR+LG+RALQISMNAP+MVELEGETDPL+IA KELR +KIP IRR+LP+
Sbjct: 61 TTRYMTKYERARLLGSRALQISMNAPIMVELEGETDPLQIAWKELRAKKIPLIIRRFLPN 120
Query: 417 GSYEDWGVDELIV 455
G YEDW VDEL +
Sbjct: 121 GMYEDWSVDELSI 133
[87][TOP]
>UniRef100_B7FS37 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FS37_PHATR
Length = 129
Score = 132 bits (332), Expect = 2e-29
Identities = 70/124 (56%), Positives = 85/124 (68%), Gaps = 4/124 (3%)
Frame = +3
Query: 99 EEEPPEPEIEEGAEEE----DPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYER 266
+E+P E ++ EE+ D DD I + R T++Y+TKYER
Sbjct: 6 DEDPMEDGTQQIREEDEDGLDISGDRDDGGETTIVGIGPDGGGTARSERITTRYLTKYER 65
Query: 267 ARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDE 446
AR+LGTRALQISMNAPVMV+L+GETDPL IA KELRERKIP IRRYLPDGS+EDW VDE
Sbjct: 66 ARVLGTRALQISMNAPVMVDLDGETDPLRIAEKELRERKIPIIIRRYLPDGSHEDWSVDE 125
Query: 447 LIVE 458
L+V+
Sbjct: 126 LVVD 129
[88][TOP]
>UniRef100_B4KC04 GI22548 n=1 Tax=Drosophila mojavensis RepID=B4KC04_DROMO
Length = 131
Score = 132 bits (332), Expect = 2e-29
Identities = 70/136 (51%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR- 236
M D +Y++ D+G ++ +++E +E+ Q +++D I A V + +R
Sbjct: 1 MDDGEYDNDDVGGDDFD---DVDEDVDEDIA--QEEEVDNIEIIAPGGAAGGGVPKSKRI 55
Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416
T+KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRR+LPD
Sbjct: 56 TTKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRFLPD 115
Query: 417 GSYEDWGVDELIVEDS 464
SYEDW +DELI+ D+
Sbjct: 116 HSYEDWSIDELIMVDN 131
[89][TOP]
>UniRef100_C5DB92 KLTH0A00660p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DB92_LACTC
Length = 155
Score = 132 bits (332), Expect = 2e-29
Identities = 75/148 (50%), Positives = 92/148 (62%), Gaps = 8/148 (5%)
Frame = +3
Query: 39 FNSLPLTMADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQ--NDDLDAEPIETEDKEAD 212
FN P D D E + PE E ++G +++ K AE + +
Sbjct: 8 FNDGPENFEDFDNEHFSDAEVYDAPE-EFKDGETKDESGKTIITGGTGAEDFQQHESNRK 66
Query: 213 QPVERP------RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR 374
+ ++ R T+ YMTKYERARILGTRALQISMNAPV V+LEGETDPL IAMKEL
Sbjct: 67 RTLKEKAIPKDERTTTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELA 126
Query: 375 ERKIPFTIRRYLPDGSYEDWGVDELIVE 458
E+KIP IRRYLPDGS+EDW V+ELIV+
Sbjct: 127 EKKIPLVIRRYLPDGSFEDWSVEELIVD 154
[90][TOP]
>UniRef100_A7TF04 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TF04_VANPO
Length = 153
Score = 132 bits (332), Expect = 2e-29
Identities = 74/133 (55%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
Frame = +3
Query: 72 DYEDIDMGYEEEPPEPE----IEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
D E+ + G+ + + E I G D ++QND + + KE P + R T
Sbjct: 25 DEENFEEGFRDGETKNEEGKTIITGGLGPDDNQQNDIFRRKTL----KERAIP-KNDRTT 79
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
+ YMTKYERARILGTRALQISMNAPV V+LEGETDPL IAMKEL E+KIP IRRYLPDG
Sbjct: 80 TPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELAEKKIPLVIRRYLPDG 139
Query: 420 SYEDWGVDELIVE 458
S+EDW V+EL+V+
Sbjct: 140 SFEDWSVEELVVD 152
[91][TOP]
>UniRef100_A5E2K4 DNA-directed RNA polymerases I n=1 Tax=Lodderomyces elongisporus
RepID=A5E2K4_LODEL
Length = 165
Score = 132 bits (332), Expect = 2e-29
Identities = 65/86 (75%), Positives = 75/86 (87%)
Frame = +3
Query: 201 KEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 380
+E P E+ R T+ YMTKYERARILGTRALQIS+NAPV+V++EGETDPL+IAMKEL +R
Sbjct: 80 RELAIPKEK-RTTTPYMTKYERARILGTRALQISLNAPVLVDIEGETDPLQIAMKELAQR 138
Query: 381 KIPFTIRRYLPDGSYEDWGVDELIVE 458
KIP IRRYLPDGSYEDWG DELIV+
Sbjct: 139 KIPLVIRRYLPDGSYEDWGCDELIVD 164
[92][TOP]
>UniRef100_P20435 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=4
Tax=Saccharomyces cerevisiae RepID=RPAB2_YEAST
Length = 155
Score = 132 bits (332), Expect = 2e-29
Identities = 76/150 (50%), Positives = 95/150 (63%), Gaps = 19/150 (12%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDP---DKQNDDLDAEPIET-----EDKEADQPV 221
++ + D + +E+ E +E EE P D + D + + I T ED + + +
Sbjct: 5 EEAFNDGNENFEDFDVEHFSDEETYEEKPQFKDGETTDANGKTIVTGGNGPEDFQQHEQI 64
Query: 222 ERP-----------RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKE 368
R R T+ YMTKYERARILGTRALQISMNAPV V+LEGETDPL IAMKE
Sbjct: 65 RRKTLKEKAIPKDQRATTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKE 124
Query: 369 LRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
L E+KIP IRRYLPDGS+EDW V+ELIV+
Sbjct: 125 LAEKKIPLVIRRYLPDGSFEDWSVEELIVD 154
[93][TOP]
>UniRef100_Q3TES3 Putative uncharacterized protein n=1 Tax=Mus musculus
RepID=Q3TES3_MOUSE
Length = 127
Score = 131 bits (330), Expect = 3e-29
Identities = 72/123 (58%), Positives = 86/123 (69%), Gaps = 11/123 (8%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPV------ERP-----RRTSKYMTKYERAR 272
E+ + +D D +D + +E ++E + V ERP R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVKILPSGERPQANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+LGTRALQI+M APVMVELE ETDPL IAMK L+ RKIP IRRYLPDGSYEDWGVDELI
Sbjct: 65 VLGTRALQIAMCAPVMVELELETDPLLIAMKGLKARKIPIIIRRYLPDGSYEDWGVDELI 124
Query: 453 VED 461
+ D
Sbjct: 125 ISD 127
[94][TOP]
>UniRef100_B4I3Z2 GM10803 n=1 Tax=Drosophila sechellia RepID=B4I3Z2_DROSE
Length = 131
Score = 131 bits (330), Expect = 3e-29
Identities = 69/135 (51%), Positives = 95/135 (70%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
M D DY++ +G ++ +++E +E+ ++ D + E I + R T
Sbjct: 1 MDDADYDNCSVGGDDFD---DVDEDVDEDINQEEEAD-NIEIIAPGGAGGGGVPKSKRIT 56
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
+KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRRYLPD
Sbjct: 57 TKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLPDH 116
Query: 420 SYEDWGVDELIVEDS 464
SYEDW +DELI+ D+
Sbjct: 117 SYEDWSIDELIMVDN 131
[95][TOP]
>UniRef100_Q2H6G6 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
RepID=Q2H6G6_CHAGB
Length = 160
Score = 131 bits (330), Expect = 3e-29
Identities = 72/138 (52%), Positives = 92/138 (66%), Gaps = 13/138 (9%)
Frame = +3
Query: 78 EDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLD-----------AEPIETEDKE-ADQPV 221
ED D YE EP E ++ A + + +N D D A + DK D+ +
Sbjct: 22 EDPDEYYEPEPEPAEEDDAARAPELEGENQDADHVVASGDPNAAANHGKGNDKSHKDKKI 81
Query: 222 ERPRRTSK-YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTI 398
+RT+ +MTKYE+ARILGTRALQISMNAPV+V+LEGETDPL+IA+KELRE+KIP +
Sbjct: 82 PNDQRTTTPFMTKYEKARILGTRALQISMNAPVLVDLEGETDPLQIAIKELREKKIPLIV 141
Query: 399 RRYLPDGSYEDWGVDELI 452
RRYLPDG YEDW +EL+
Sbjct: 142 RRYLPDGYYEDWSCEELL 159
[96][TOP]
>UniRef100_Q5KBQ4 DNA-directed RNA polymerases I, II, and III polypeptide, putative
n=1 Tax=Filobasidiella neoformans RepID=Q5KBQ4_CRYNE
Length = 148
Score = 131 bits (329), Expect = 4e-29
Identities = 80/150 (53%), Positives = 102/150 (68%), Gaps = 16/150 (10%)
Frame = +3
Query: 60 MADD---DYEDIDMG-YEEEPPEP-----EIEEGAEEEDPDKQNDDLDAEPIETEDKEAD 212
M+DD D D + G YE++ +P E EE AEEE + + D+ IE+ E D
Sbjct: 1 MSDDERMDTGDFEGGDYEQDYVDPDTLNYENEENAEEEAANGEVDETMI--IESGAPEGD 58
Query: 213 QP----VERP---RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKEL 371
+P +P R T+ YMTKYERAR+LGTRALQISMNAPV+V +EGE+DPLEIA+KEL
Sbjct: 59 RPRTGKAAKPNEIRVTTPYMTKYERARVLGTRALQISMNAPVLVPVEGESDPLEIAIKEL 118
Query: 372 RERKIPFTIRRYLPDGSYEDWGVDELIVED 461
+KIP IRRYLPD S+EDW V+ELIV++
Sbjct: 119 AAKKIPLVIRRYLPDNSFEDWKVEELIVQE 148
[97][TOP]
>UniRef100_B4M5E9 GJ11106 n=1 Tax=Drosophila virilis RepID=B4M5E9_DROVI
Length = 131
Score = 130 bits (328), Expect = 5e-29
Identities = 69/136 (50%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR- 236
M D +Y++ D+G ++ +++E +E+ Q +++D I V + +R
Sbjct: 1 MDDGEYDNDDVGGDDFD---DVDEDVDEDIA--QEEEVDNIEIIAPGGAGGGGVPKSKRI 55
Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416
T+KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRR+LPD
Sbjct: 56 TTKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRFLPD 115
Query: 417 GSYEDWGVDELIVEDS 464
SYEDW +DELI+ D+
Sbjct: 116 HSYEDWSIDELIMVDN 131
[98][TOP]
>UniRef100_Q5CXV6 DNA-directed RNA polymerase subunit n=2 Tax=Cryptosporidium
RepID=Q5CXV6_CRYPV
Length = 129
Score = 130 bits (327), Expect = 7e-29
Identities = 68/130 (52%), Positives = 92/130 (70%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKY 248
+DY++ Y+EE E E EE + D+ + L + + + + +P E PR T+ Y
Sbjct: 2 NDYDESGGNYDEEEEYMEEELIEEEIEGDENIEILTEDAVHS--RYDGKPNEGPRITTPY 59
Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428
MTK+E+ARI+GTRALQISMNAPV + L+GETDPL IA KEL +KIPF IRRYLP+G+YE
Sbjct: 60 MTKFEKARIIGTRALQISMNAPVAIPLDGETDPLLIAEKELYTKKIPFVIRRYLPNGNYE 119
Query: 429 DWGVDELIVE 458
DW +DELI++
Sbjct: 120 DWKIDELILD 129
[99][TOP]
>UniRef100_C5L3X6 DNA-directed RNA polymerase subunit, putative n=1 Tax=Perkinsus
marinus ATCC 50983 RepID=C5L3X6_9ALVE
Length = 138
Score = 130 bits (326), Expect = 9e-29
Identities = 68/125 (54%), Positives = 89/125 (71%), Gaps = 3/125 (2%)
Frame = +3
Query: 87 DMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEAD---QPVERPRRTSKYMTK 257
D+ +E+ P++ A+EE D + + + T+ K+ D + E PRRTS YMTK
Sbjct: 13 DLEVDEDDLMPDLN--ADEEVAGGSGDVITSGRVPTQPKDDDFVAREAEGPRRTSPYMTK 70
Query: 258 YERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWG 437
YERARI+GTRALQISMNAPVMV+ EGETDP+ IA KEL + IPF +RR+LPDG+YEDW
Sbjct: 71 YERARIIGTRALQISMNAPVMVDTEGETDPMAIAEKELVAKVIPFIVRRFLPDGTYEDWK 130
Query: 438 VDELI 452
V+EL+
Sbjct: 131 VEELM 135
[100][TOP]
>UniRef100_B6KD21 RNA polymerase II subunit RPB6, putative n=3 Tax=Toxoplasma gondii
RepID=B6KD21_TOXGO
Length = 146
Score = 130 bits (326), Expect = 9e-29
Identities = 68/130 (52%), Positives = 90/130 (69%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKY 248
DD+ + D G +E + ++E A + ++D LD A +P E PR TS Y
Sbjct: 19 DDFGE-DFGDDELIDDFDVERAAAAASHEPESDILDPSDPRAARPHA-RPSEGPRITSPY 76
Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428
+TK+E+AR++GTRALQISMNAP+ + L+GETDPL IA KEL ++ IPFTIRRYLPDGSYE
Sbjct: 77 ITKFEKARVIGTRALQISMNAPITIPLDGETDPLIIAEKELYQKTIPFTIRRYLPDGSYE 136
Query: 429 DWGVDELIVE 458
DW + ELIV+
Sbjct: 137 DWKIQELIVD 146
[101][TOP]
>UniRef100_Q6FSJ7 Strain CBS138 chromosome G complete sequence n=1 Tax=Candida
glabrata RepID=Q6FSJ7_CANGA
Length = 159
Score = 130 bits (326), Expect = 9e-29
Identities = 71/145 (48%), Positives = 93/145 (64%), Gaps = 15/145 (10%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDL------------DAEPIETEDKEAD 212
+++ED D+ + + + E E ++ D+ D + +ET ++
Sbjct: 13 ENFEDFDVEHFSDEDQYEDNVKTEANGGEQMKDEEGRTIVTGGMGPEDYKNVETHRRKTL 72
Query: 213 QPVERP---RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERK 383
+ P R T+ YMTKYERARILGTRALQISMNAPV V+LEGETDPL IAMKEL E+K
Sbjct: 73 KEKAIPKEDRTTTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELAEKK 132
Query: 384 IPFTIRRYLPDGSYEDWGVDELIVE 458
IP IRRYLPDGS+EDW V+EL+V+
Sbjct: 133 IPLVIRRYLPDGSFEDWSVEELVVD 157
[102][TOP]
>UniRef100_B6K6D2 DNA-directed RNA polymerase I, II and III subunit Rpb6 n=1
Tax=Schizosaccharomyces japonicus yFS275
RepID=B6K6D2_SCHJY
Length = 145
Score = 130 bits (326), Expect = 9e-29
Identities = 74/139 (53%), Positives = 84/139 (60%), Gaps = 10/139 (7%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDD----------LDAEPIETEDKEADQ 215
DD Y EEE + E+ E A D N A + A
Sbjct: 7 DDAYGAEGNYMEEEVEDVEVTETAAAGTEDAANRSNVVVSGDVAAAAAAAASSSGTSAKA 66
Query: 216 PVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 395
RRT+ YMTKYERARILGTRALQISMNAPV+V+LEGETDPL+IAMKEL ++KIP
Sbjct: 67 ITGADRRTTPYMTKYERARILGTRALQISMNAPVLVDLEGETDPLQIAMKELAQKKIPLL 126
Query: 396 IRRYLPDGSYEDWGVDELI 452
+RRYLPDGSYEDW V ELI
Sbjct: 127 VRRYLPDGSYEDWSVSELI 145
[103][TOP]
>UniRef100_B6H9E7 Pc16g10310 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6H9E7_PENCW
Length = 153
Score = 130 bits (326), Expect = 9e-29
Identities = 74/148 (50%), Positives = 96/148 (64%), Gaps = 19/148 (12%)
Frame = +3
Query: 66 DDDYE---DIDMGYEEEPPEPEIEEGAEEED---------PDKQNDDLDAEP-------I 188
DDD E D + G + EPE +EG E ED + +N + +P +
Sbjct: 7 DDDVEETYDYEPGEDVFDEEPEEQEGLEGEDGVEGEEYPTTNGENVVVSGDPNAGYAGKV 66
Query: 189 ETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKE 368
+ +E P ++ R T+ Y+TKYERAR+LGTRALQISMNAPV+V+LEGETDPL+IAMKE
Sbjct: 67 MEQSREKKVPNDQ-RTTTPYLTKYERARVLGTRALQISMNAPVLVDLEGETDPLQIAMKE 125
Query: 369 LRERKIPFTIRRYLPDGSYEDWGVDELI 452
L ++KIP IRRYLPDG YEDW +EL+
Sbjct: 126 LNQKKIPLIIRRYLPDGWYEDWTCEELL 153
[104][TOP]
>UniRef100_Q4P6H4 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4P6H4_USTMA
Length = 215
Score = 129 bits (325), Expect = 1e-28
Identities = 71/131 (54%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Frame = +3
Query: 75 YEDIDMGYE-EEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYM 251
Y+D + Y+ ++ E + ++GA+ + +P + +A+ R T+ YM
Sbjct: 13 YDDEEPVYDGDDLGEEQFDDGADGAANGIVHSSAGGDPSTSMAGQANAE----RITTPYM 68
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYED 431
TKYERARILGTRALQISMNAPV+V EGETDPLEIAMKEL +KIP +RRYLPDGSYED
Sbjct: 69 TKYERARILGTRALQISMNAPVLVPTEGETDPLEIAMKELAAKKIPLVVRRYLPDGSYED 128
Query: 432 WGVDELIVEDS 464
W V ELIV DS
Sbjct: 129 WTVSELIVSDS 139
[105][TOP]
>UniRef100_P36595 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1
Tax=Schizosaccharomyces pombe RepID=RPAB2_SCHPO
Length = 142
Score = 129 bits (324), Expect = 2e-28
Identities = 74/140 (52%), Positives = 92/140 (65%), Gaps = 13/140 (9%)
Frame = +3
Query: 72 DYEDID-MGYEEEPPEPEIEE--GAEEEDPDKQNDDLDAEP---IETEDKEADQPVE--- 224
DYE+ + G + E E++E +E +Q EP + TED + + +
Sbjct: 3 DYEEDEAFGMDGAVMEEEVDELEMIDENGQSQQGVSHPGEPSTTVITEDVASSKTAQSGK 62
Query: 225 ----RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 392
R T+ YMTKYERARILGTRALQISMNAPV+V+LEGETDPL+IAMKEL ++KIP
Sbjct: 63 AVAKEDRTTTPYMTKYERARILGTRALQISMNAPVLVDLEGETDPLQIAMKELAQKKIPL 122
Query: 393 TIRRYLPDGSYEDWGVDELI 452
+RRYLPDGSYEDW V ELI
Sbjct: 123 LVRRYLPDGSYEDWSVAELI 142
[106][TOP]
>UniRef100_B6AF51 DNA-directed RNA polymerases I, II, and III subunit RPABC2,
putative n=1 Tax=Cryptosporidium muris RN66
RepID=B6AF51_9CRYT
Length = 132
Score = 129 bits (323), Expect = 2e-28
Identities = 72/130 (55%), Positives = 91/130 (70%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKY 248
+D ED D EE E EIE A +E+ + DD+ +K +P E PR T+ Y
Sbjct: 12 EDEED-DFVDEEYLEEDEIE--ASDENVEIMTDDV------IHNKYEGKPCEGPRITTPY 62
Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428
MTK+E+ARI+GTRALQISMNAPV + L+GETDPL IA KEL +KIPF IRRYLP+G+YE
Sbjct: 63 MTKFEKARIIGTRALQISMNAPVAIPLDGETDPLIIAEKELYAKKIPFIIRRYLPNGNYE 122
Query: 429 DWGVDELIVE 458
DW +DELI++
Sbjct: 123 DWKIDELILD 132
[107][TOP]
>UniRef100_Q758N4 AEL279Cp n=1 Tax=Eremothecium gossypii RepID=Q758N4_ASHGO
Length = 154
Score = 129 bits (323), Expect = 2e-28
Identities = 65/86 (75%), Positives = 72/86 (83%)
Frame = +3
Query: 201 KEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 380
KE P E R T+ YMTKYERARILGTRALQISMNAPV V+LEGETDP+ IAMKEL E+
Sbjct: 69 KEKAIPKEE-RTTTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPMRIAMKELAEK 127
Query: 381 KIPFTIRRYLPDGSYEDWGVDELIVE 458
KIP IRRYLPDGS+EDW V+ELIV+
Sbjct: 128 KIPLVIRRYLPDGSFEDWSVEELIVD 153
[108][TOP]
>UniRef100_Q6CWK0 KLLA0B03476p n=1 Tax=Kluyveromyces lactis RepID=Q6CWK0_KLULA
Length = 158
Score = 129 bits (323), Expect = 2e-28
Identities = 62/76 (81%), Positives = 68/76 (89%)
Frame = +3
Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410
R T+ YMTKYERARILGTRALQISMNAPV V+LEGETDPL IAMKEL E+KIP IRRYL
Sbjct: 82 RTTTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELAEKKIPLVIRRYL 141
Query: 411 PDGSYEDWGVDELIVE 458
PDGS+EDW V+ELIV+
Sbjct: 142 PDGSFEDWSVEELIVD 157
[109][TOP]
>UniRef100_B4NB83 GK11847 n=1 Tax=Drosophila willistoni RepID=B4NB83_DROWI
Length = 132
Score = 128 bits (322), Expect = 3e-28
Identities = 64/131 (48%), Positives = 87/131 (66%), Gaps = 24/131 (18%)
Frame = +3
Query: 144 EDPDKQNDDLDAEPIETEDKEADQPVERP------------------------RRTSKYM 251
++ D NDD+ + + D++ D+ + + R T+KYM
Sbjct: 2 DEADFDNDDVGGDDFDDVDEDVDEDINQEEEVDNIEIITPGGTAPGGGVPKSKRITTKYM 61
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYED 431
TKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRR+LPD SYED
Sbjct: 62 TKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRFLPDHSYED 121
Query: 432 WGVDELIVEDS 464
W +DELI+ D+
Sbjct: 122 WSIDELIMVDN 132
[110][TOP]
>UniRef100_C9SV68 DNA-directed RNA polymerases I n=1 Tax=Verticillium albo-atrum
VaMs.102 RepID=C9SV68_9PEZI
Length = 149
Score = 128 bits (321), Expect = 4e-28
Identities = 73/136 (53%), Positives = 95/136 (69%), Gaps = 6/136 (4%)
Frame = +3
Query: 63 ADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQN-DDLDAEPIETED-----KEADQPVE 224
A DD E D Y+E P E E ++ E+ + + N D A T++ K+ P +
Sbjct: 16 AFDDDEAFD--YDEFPEEDEKKDDEEDGEDNVINAGDPSAAAAATKNSTLSHKDMKIPDD 73
Query: 225 RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
+ R T+ YMTKYE+ARILGTRALQISMNAPV+V+LEGETDPL+IA+KELRE+KIP +RR
Sbjct: 74 Q-RTTTPYMTKYEKARILGTRALQISMNAPVLVDLEGETDPLQIAIKELREKKIPLIVRR 132
Query: 405 YLPDGSYEDWGVDELI 452
Y+PDG YEDW +EL+
Sbjct: 133 YMPDGYYEDWTCEELL 148
[111][TOP]
>UniRef100_C5P0V3 DNA-directed RNA polymerase subunit, putative n=1 Tax=Coccidioides
posadasii C735 delta SOWgp RepID=C5P0V3_COCP7
Length = 158
Score = 128 bits (321), Expect = 4e-28
Identities = 71/142 (50%), Positives = 92/142 (64%), Gaps = 15/142 (10%)
Frame = +3
Query: 72 DYEDIDMGY-EEEP-----PEPEIEEGA--------EEEDPDKQNDDLDAEPIETEDKEA 209
DYE + Y + EP PE E EEGA + P D A + ++
Sbjct: 17 DYEPPEYDYIDNEPEDYVSPEQEAEEGAYAVLNGDGQPVTPGANGDSAAASKSKVMLQQR 76
Query: 210 DQPVERPRRTSK-YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKI 386
++ V +RT+ YMTKYERAR+LGTRALQISMNAP++V+LEGETDPL+IA+KEL ++KI
Sbjct: 77 EKKVPNDQRTTTPYMTKYERARVLGTRALQISMNAPILVDLEGETDPLQIALKELNQKKI 136
Query: 387 PFTIRRYLPDGSYEDWGVDELI 452
P +RRYLPDG YEDW +EL+
Sbjct: 137 PLIVRRYLPDGWYEDWTCEELL 158
[112][TOP]
>UniRef100_C5DUS0 ZYRO0D00880p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DUS0_ZYGRC
Length = 165
Score = 128 bits (321), Expect = 4e-28
Identities = 61/76 (80%), Positives = 68/76 (89%)
Frame = +3
Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410
R T+ YMTKYERARILGTRALQISMNAPV V+LEGETDPL IAMKEL E+KIP IRRY+
Sbjct: 89 RTTTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELAEKKIPLVIRRYM 148
Query: 411 PDGSYEDWGVDELIVE 458
PDGS+EDW V+ELIV+
Sbjct: 149 PDGSFEDWSVEELIVD 164
[113][TOP]
>UniRef100_A7UVS4 DNA-directed RNA polymerases I n=1 Tax=Neurospora crassa
RepID=A7UVS4_NEUCR
Length = 160
Score = 128 bits (321), Expect = 4e-28
Identities = 72/151 (47%), Positives = 92/151 (60%), Gaps = 22/151 (14%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPD---KQNDDLDAEPIET-------------- 194
DDD E ID +E P+ E E D D + D++D +
Sbjct: 9 DDDREPIDEPAFDEDPDEYYEPEPEPADDDVAGRPGDEVDEAENDNNIVTSGDPNAAANA 68
Query: 195 ----EDKEADQPVERPRR-TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA 359
E D+ + +R T+ YMTKYE+ARILGTRALQISMNAPV+V+LEGETDPL+IA
Sbjct: 69 GKGNEKSHKDKKIPNDQRSTTPYMTKYEKARILGTRALQISMNAPVLVDLEGETDPLQIA 128
Query: 360 MKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+KELRE+KIP +RRY+PDG YEDW +EL+
Sbjct: 129 IKELREKKIPLIVRRYMPDGYYEDWTCEELL 159
[114][TOP]
>UniRef100_UPI000187EA0E hypothetical protein MPER_09004 n=1 Tax=Moniliophthora perniciosa
FA553 RepID=UPI000187EA0E
Length = 169
Score = 127 bits (320), Expect = 5e-28
Identities = 72/145 (49%), Positives = 93/145 (64%), Gaps = 16/145 (11%)
Frame = +3
Query: 72 DYEDIDMGYEEEPPEPEIEEGAE--EEDPDKQNDDLDAEPIETEDKEADQPVERP----- 230
D + ID GY+ + E ++G E E+ D Q + ++ + E ++P E P
Sbjct: 25 DEQFIDEGYDLLARDAEGQQGGEGVEQAGDPQINGVNGVDHDQEMANGEEPQEPPAQASI 84
Query: 231 ---------RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERK 383
R T+ Y+TKYERARILGTRALQISMNAPV+V L+GETD L+IA+KEL +RK
Sbjct: 85 LGERQPNKERITTPYLTKYERARILGTRALQISMNAPVLVPLDGETDALQIAIKELSQRK 144
Query: 384 IPFTIRRYLPDGSYEDWGVDELIVE 458
IP IRRYLPDGS+EDW V ELI +
Sbjct: 145 IPLIIRRYLPDGSFEDWSVSELITD 169
[115][TOP]
>UniRef100_A7SYA5 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SYA5_NEMVE
Length = 71
Score = 127 bits (320), Expect = 5e-28
Identities = 61/71 (85%), Positives = 66/71 (92%)
Frame = +3
Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428
MTKYERAR+LGTRALQISM APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGS+E
Sbjct: 1 MTKYERARVLGTRALQISMGAPVMVELEGETDPLQIAMKELKARKIPIIIRRYLPDGSHE 60
Query: 429 DWGVDELIVED 461
DWG+DELIV D
Sbjct: 61 DWGIDELIVTD 71
[116][TOP]
>UniRef100_Q4WJQ5 DNA-directed RNA polymerase I, II, and III subunit Rpb6 n=1
Tax=Aspergillus fumigatus RepID=Q4WJQ5_ASPFU
Length = 161
Score = 127 bits (320), Expect = 5e-28
Identities = 73/149 (48%), Positives = 92/149 (61%), Gaps = 22/149 (14%)
Frame = +3
Query: 72 DYEDIDMGYEEEPPE----PEIEEGAEEEDPDKQNDD------------LDAEPIE---- 191
DYE + ++E PE PE EGAE D DD + +P
Sbjct: 14 DYEPAEEVFDENEPEDFINPEDLEGAEG-GADGYGDDHYTPAVNGDRIVVSGDPSAGYSG 72
Query: 192 --TEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMK 365
E A + R+T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGETDPL+IA+K
Sbjct: 73 KVVEQARAKKIPNEERKTTPYMTKYERARVLGTRALQISMNAPVLVDLEGETDPLQIAIK 132
Query: 366 ELRERKIPFTIRRYLPDGSYEDWGVDELI 452
EL ++KIP +RRYLPDG+YEDW +EL+
Sbjct: 133 ELNQKKIPLIVRRYLPDGTYEDWTCEELL 161
[117][TOP]
>UniRef100_B8MH46 DNA-directed RNA polymerase I, II, and III subunit Rpb6 n=1
Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MH46_TALSN
Length = 162
Score = 127 bits (320), Expect = 5e-28
Identities = 75/164 (45%), Positives = 94/164 (57%), Gaps = 37/164 (22%)
Frame = +3
Query: 72 DYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEA-------------- 209
D+E D GY+ + EPE ++ E D L+ E +E E EA
Sbjct: 6 DHEAEDTGYDYDGGEPEYDDNEPE-------DFLEPEDVEPEGDEAVHGAEDVYQDAVNG 58
Query: 210 ------------------DQPVERP-----RRTSKYMTKYERARILGTRALQISMNAPVM 320
+QP E+ R T+ YMTKYERAR+LGTRALQISMNAPV+
Sbjct: 59 ERTIISGDPNAGGGRGVMEQPREKKIPNDQRSTTPYMTKYERARVLGTRALQISMNAPVL 118
Query: 321 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
V+LEGETDPL+IA+KEL ++KIP IRRYLPDG YEDW +EL+
Sbjct: 119 VDLEGETDPLQIAIKELNQKKIPLIIRRYLPDGYYEDWTCEELL 162
[118][TOP]
>UniRef100_B0XP09 DNA-directed RNA polymerase I, II, and III subunit Rpb6 n=1
Tax=Aspergillus fumigatus A1163 RepID=B0XP09_ASPFC
Length = 161
Score = 127 bits (320), Expect = 5e-28
Identities = 73/149 (48%), Positives = 92/149 (61%), Gaps = 22/149 (14%)
Frame = +3
Query: 72 DYEDIDMGYEEEPPE----PEIEEGAEEEDPDKQNDD------------LDAEPIE---- 191
DYE + ++E PE PE EGAE D DD + +P
Sbjct: 14 DYEPAEEVFDENEPEDFINPEDLEGAEG-GADGYGDDHYTPAVNGDRIVVSGDPSAGYLG 72
Query: 192 --TEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMK 365
E A + R+T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGETDPL+IA+K
Sbjct: 73 KVVEQARAKKIPNEERKTTPYMTKYERARVLGTRALQISMNAPVLVDLEGETDPLQIAIK 132
Query: 366 ELRERKIPFTIRRYLPDGSYEDWGVDELI 452
EL ++KIP +RRYLPDG+YEDW +EL+
Sbjct: 133 ELNQKKIPLIVRRYLPDGTYEDWTCEELL 161
[119][TOP]
>UniRef100_A1CRE9 DNA-directed RNA polymerase I, II, and III subunit Rpb6 n=1
Tax=Aspergillus clavatus RepID=A1CRE9_ASPCL
Length = 161
Score = 127 bits (319), Expect = 6e-28
Identities = 72/149 (48%), Positives = 90/149 (60%), Gaps = 22/149 (14%)
Frame = +3
Query: 72 DYEDIDMGYEEEPPE----PEIEEGAEEEDPDKQNDDLDAEPIE---------------- 191
DYE + +++ PE PE E AE D DD A +
Sbjct: 14 DYEPAEEVFDDHEPEDFINPEDIEAAEG-GADGYGDDSYAPAVNGDRVVVSGDPSAGYSG 72
Query: 192 --TEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMK 365
E A + R+T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGETDPL+IAMK
Sbjct: 73 KVVEQARAKKIPNEERKTTPYMTKYERARVLGTRALQISMNAPVLVDLEGETDPLQIAMK 132
Query: 366 ELRERKIPFTIRRYLPDGSYEDWGVDELI 452
EL ++KIP +RRYLPDG+YEDW +EL+
Sbjct: 133 ELNQKKIPLIVRRYLPDGTYEDWTCEELL 161
[120][TOP]
>UniRef100_A1D4B1 DNA-directed RNA polymerase I, II, and III subunit Rpb6 n=1
Tax=Neosartorya fischeri NRRL 181 RepID=A1D4B1_NEOFI
Length = 161
Score = 127 bits (318), Expect = 8e-28
Identities = 73/149 (48%), Positives = 92/149 (61%), Gaps = 22/149 (14%)
Frame = +3
Query: 72 DYEDIDMGYEEEPPE----PEIEEGAEEEDPDKQNDD------------LDAEPIE---- 191
DYE + ++E PE PE EGAE D DD + +P
Sbjct: 14 DYEPAEEVFDENEPEDFINPEDLEGAEG-GADGYADDHYTPAVNGDRIVVSGDPSAGYSG 72
Query: 192 --TEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMK 365
E A + R+T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGETDPL+IA+K
Sbjct: 73 KVVEQARAKKIPNEERKTTPYMTKYERARVLGTRALQISMNAPVLVDLEGETDPLQIAIK 132
Query: 366 ELRERKIPFTIRRYLPDGSYEDWGVDELI 452
EL ++KIP +RRYLPDG+YEDW +EL+
Sbjct: 133 ELNQKKIPLIVRRYLPDGTYEDWTCEELL 161
[121][TOP]
>UniRef100_Q5D946 SJCHGC05009 protein n=1 Tax=Schistosoma japonicum
RepID=Q5D946_SCHJA
Length = 135
Score = 126 bits (317), Expect = 1e-27
Identities = 68/133 (51%), Positives = 89/133 (66%), Gaps = 2/133 (1%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQND-DLDAEPIETEDKEADQPVERPRR-TS 242
D+Y ID +E P E+ + + PD D P + + PVE+ +R T+
Sbjct: 3 DEYGGIDDFESDEEPLDEVPDDDLDTKPDGVTYITTDEVPRLSSGQSLAAPVEKSKRITT 62
Query: 243 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 422
Y+TKYERAR+LG RALQ+SM+APVMVEL+GE DPL+IA KELR KIP IRR+LPDGS
Sbjct: 63 PYLTKYERARVLGARALQLSMSAPVMVELDGERDPLKIAEKELRANKIPIIIRRFLPDGS 122
Query: 423 YEDWGVDELIVED 461
+EDW +DELI+ +
Sbjct: 123 FEDWSLDELILTE 135
[122][TOP]
>UniRef100_B3S9T0 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3S9T0_TRIAD
Length = 95
Score = 126 bits (316), Expect = 1e-27
Identities = 60/77 (77%), Positives = 67/77 (87%)
Frame = +3
Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410
R T YMTKYERARILGTRALQISMNAPVMVELEGETDPL+IA+KEL+ KIP +RR+L
Sbjct: 18 RTTQPYMTKYERARILGTRALQISMNAPVMVELEGETDPLQIALKELKANKIPMIVRRFL 77
Query: 411 PDGSYEDWGVDELIVED 461
PDGSYEDW +ELIV +
Sbjct: 78 PDGSYEDWSCNELIVSE 94
[123][TOP]
>UniRef100_B8N1E2 DNA-directed RNA polymerase I, II, and III subunit Rpb6 n=1
Tax=Aspergillus flavus NRRL3357 RepID=B8N1E2_ASPFN
Length = 159
Score = 126 bits (316), Expect = 1e-27
Identities = 74/151 (49%), Positives = 93/151 (61%), Gaps = 22/151 (14%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPE-------IE--EGAEEEDPDKQNDDLDAEPIETED------ 200
D+D D D G + + EPE IE EGAE D ++ + +
Sbjct: 9 DEDNYDFDAGQDYDDNEPEDFLNPEDIEGVEGAEAYGEDHYTPAVNGDRVVVSGDPSAGY 68
Query: 201 --KEADQPVERP-----RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA 359
K +Q ER R T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGETDPL+IA
Sbjct: 69 SGKVMEQVRERKVPNDQRTTTPYMTKYERARVLGTRALQISMNAPVLVDLEGETDPLQIA 128
Query: 360 MKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+KEL ++KIP +RRYLPDG YEDW +EL+
Sbjct: 129 IKELNQKKIPLIVRRYLPDGWYEDWTCEELL 159
[124][TOP]
>UniRef100_A4QSN6 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
RepID=A4QSN6_MAGGR
Length = 151
Score = 125 bits (315), Expect = 2e-27
Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 16/136 (11%)
Frame = +3
Query: 93 GYEEEPP--EPEIEEGAEEEDP-DKQNDDLDAEPIETEDKEA------------DQPVER 227
GY EE + E EE +EE P D D+ DA + + D A D+ +
Sbjct: 15 GYHEEAAFDDVEPEEIFDEEVPLDDDEDNEDANVVVSGDPNAAARATGQKLSHKDKKIPN 74
Query: 228 PRRTSK-YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
+RT+ +MTKYE+ARILGTRALQISMNAPV+V+LEGETDPL+IA+KEL E+KIP IRR
Sbjct: 75 DKRTTTPFMTKYEKARILGTRALQISMNAPVLVDLEGETDPLQIAIKELAEKKIPLIIRR 134
Query: 405 YLPDGSYEDWGVDELI 452
Y+PDG YEDW +EL+
Sbjct: 135 YMPDGYYEDWTCEELL 150
[125][TOP]
>UniRef100_UPI00005A20F9 PREDICTED: similar to DNA directed RNA polymerase II polypeptide F
isoform 2 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A20F9
Length = 71
Score = 125 bits (314), Expect = 2e-27
Identities = 61/71 (85%), Positives = 65/71 (91%)
Frame = +3
Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428
MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYE
Sbjct: 1 MTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYE 60
Query: 429 DWGVDELIVED 461
DWGVDELI+ D
Sbjct: 61 DWGVDELIITD 71
[126][TOP]
>UniRef100_C4QH33 DNA-directed rna polymerase subunit rpb6, putative n=1
Tax=Schistosoma mansoni RepID=C4QH33_SCHMA
Length = 134
Score = 124 bits (311), Expect = 5e-27
Identities = 66/132 (50%), Positives = 86/132 (65%), Gaps = 1/132 (0%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR-TSK 245
D+Y D +E P E+ E + P+ E + PVE+ +R T+
Sbjct: 3 DEYGGADDFESDEEPLDEVPEEDLDTKPEGVTYITADETPRLSGQNMAAPVEKSKRVTTP 62
Query: 246 YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSY 425
Y+TKYERAR+LG RALQ+SM+APVMVEL+GE DPL+IA KELR KIP IRR+LPDGS+
Sbjct: 63 YLTKYERARVLGARALQLSMSAPVMVELDGERDPLKIAEKELRANKIPIIIRRFLPDGSF 122
Query: 426 EDWGVDELIVED 461
EDW +DELI+ +
Sbjct: 123 EDWSLDELILTE 134
[127][TOP]
>UniRef100_B4QWV0 GD19782 n=1 Tax=Drosophila simulans RepID=B4QWV0_DROSI
Length = 131
Score = 124 bits (310), Expect = 7e-27
Identities = 67/135 (49%), Positives = 92/135 (68%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239
M D DY++ D+G ++ +++E +E+ ++ D + E I + R T
Sbjct: 1 MDDADYDNDDVGGDDFD---DVDEDVDEDINQEEEAD-NIEIIAPGGAGGGGVPKSKRIT 56
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419
+KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+ +KIP R LPD
Sbjct: 57 TKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKPKKIPLIFRPPLPDH 116
Query: 420 SYEDWGVDELIVEDS 464
SYEDW +DELI+ D+
Sbjct: 117 SYEDWSIDELIMVDN 131
[128][TOP]
>UniRef100_Q0V6W2 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0V6W2_PHANO
Length = 161
Score = 123 bits (308), Expect = 1e-26
Identities = 71/154 (46%), Positives = 95/154 (61%), Gaps = 26/154 (16%)
Frame = +3
Query: 69 DDYEDIDMGYEE------EPPEPEIEE-------GAEEEDPDKQNDDL----DAEP---- 185
DDY D GY++ E EP++ + G +++D Q D++ DA
Sbjct: 7 DDYGGGDAGYDDGAVEFDEEMEPDVFDDNDDDAAGGQDQDAQDQEDNIVVSGDASAGAAA 66
Query: 186 ----IETEDKEADQPVERPRRTSK-YMTKYERARILGTRALQISMNAPVMVELEGETDPL 350
T + E D+ V RT+ YMTKYERAR+LGTRALQIS NAPV++++EG TDPL
Sbjct: 67 KDKVKNTVENEKDKKVAPENRTTTPYMTKYERARVLGTRALQISGNAPVLIDVEGMTDPL 126
Query: 351 EIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+IA KEL+E+KIP +RRYLPDG YEDW +EL+
Sbjct: 127 QIAAKELQEKKIPLVVRRYLPDGFYEDWTCEELL 160
[129][TOP]
>UniRef100_C5FTJ3 DNA-directed RNA polymerase I n=1 Tax=Microsporum canis CBS 113480
RepID=C5FTJ3_NANOT
Length = 161
Score = 122 bits (307), Expect = 1e-26
Identities = 68/140 (48%), Positives = 91/140 (65%), Gaps = 10/140 (7%)
Frame = +3
Query: 63 ADDDYEDI---DMGYEEEPPEPE--IEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVER 227
A+D ++D D E++ E + + + QN D +A + + K Q E+
Sbjct: 22 AEDFFDDTVVDDFAVEDQQEEGYAILNGDGQPATTNGQNSDPNASSGQGQGKTILQQREK 81
Query: 228 P-----RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 392
R T+ YMTKYERAR+LGTRALQISMNAP++V+LEGETDPL+IA+KEL ++KIP
Sbjct: 82 KVANDQRTTTPYMTKYERARVLGTRALQISMNAPILVDLEGETDPLQIALKELNQKKIPL 141
Query: 393 TIRRYLPDGSYEDWGVDELI 452
IRRYLPDG YEDW +EL+
Sbjct: 142 IIRRYLPDGWYEDWTCEELL 161
[130][TOP]
>UniRef100_Q84Q45 Putative DNA-directed RNA polymerase Iia n=1 Tax=Oryza sativa
Japonica Group RepID=Q84Q45_ORYSJ
Length = 286
Score = 122 bits (306), Expect = 2e-26
Identities = 69/131 (52%), Positives = 79/131 (60%), Gaps = 28/131 (21%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIE----------------------------EGAEEEDPD 155
MA+DDY D+DMGYE+EPPEPEIE EGAEEE P+
Sbjct: 1 MAEDDYNDMDMGYEDEPPEPEIEVQSCCFVIYFWTLLYQEELCGLFTFSELEGAEEE-PE 59
Query: 156 KQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEG 335
N+D + + ED + RP +TSKYMTKYERARIL TRALQISMNAPVMVELEG
Sbjct: 60 NNNEDAVDDVVGAEDDREQEKTARPWKTSKYMTKYERARILSTRALQISMNAPVMVELEG 119
Query: 336 ETDPLEIAMKE 368
T PLE+ E
Sbjct: 120 GTYPLEVEALE 130
[131][TOP]
>UniRef100_C5GCW3 DNA-directed RNA polymerase I n=2 Tax=Ajellomyces dermatitidis
RepID=C5GCW3_AJEDR
Length = 162
Score = 122 bits (306), Expect = 2e-26
Identities = 66/152 (43%), Positives = 92/152 (60%), Gaps = 30/152 (19%)
Frame = +3
Query: 87 DMGYEEEPPEPEIEEGAEEEDPDKQNDDL---------DAEPIET--------------- 194
D G++ EPPE E + E+ + + + D +P++
Sbjct: 12 DAGFDYEPPEYEYIDNEPEDFVEPEQTEHAEGYAIVNGDGQPVQNGEENIVSGDPNAGAS 71
Query: 195 ------EDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEI 356
+ +E P ++ R T+ YMTKYERAR+LGTRALQISMNAP++V+LEGETDPL+I
Sbjct: 72 KGKVMLQQREKKVPNDQ-RTTTPYMTKYERARVLGTRALQISMNAPILVDLEGETDPLQI 130
Query: 357 AMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
A+KEL ++KIP +RRYLPDG YEDW +EL+
Sbjct: 131 ALKELAQKKIPLIVRRYLPDGWYEDWTCEELL 162
[132][TOP]
>UniRef100_C1GQL4 DNA-directed RNA polymerases I n=1 Tax=Paracoccidioides
brasiliensis Pb01 RepID=C1GQL4_PARBA
Length = 165
Score = 122 bits (306), Expect = 2e-26
Identities = 60/110 (54%), Positives = 78/110 (70%)
Frame = +3
Query: 123 IEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQIS 302
I+ G E N + + +E P ++ R T+ YMTKYERAR+LGTRALQIS
Sbjct: 57 IQNGTENVASGDPNAGASKGKVMLQQREKKVPNDQ-RTTTPYMTKYERARVLGTRALQIS 115
Query: 303 MNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
MNAP++V+LEGETDPL+IA+KEL ++KIP +RRYLPDG YEDW +EL+
Sbjct: 116 MNAPILVDLEGETDPLQIALKELAQKKIPLIVRRYLPDGWYEDWTCEELL 165
[133][TOP]
>UniRef100_C1G9T6 DNA-directed RNA polymerases I n=1 Tax=Paracoccidioides
brasiliensis Pb18 RepID=C1G9T6_PARBD
Length = 165
Score = 122 bits (306), Expect = 2e-26
Identities = 70/159 (44%), Positives = 90/159 (56%), Gaps = 32/159 (20%)
Frame = +3
Query: 72 DYEDID-MGYEEEPPEPE-------------------------------IEEGAEEEDPD 155
D+ED D G++ EPPE E I G E
Sbjct: 8 DHEDHDDAGFDYEPPEYEYIDNEPEDYIEPEQAEQGDQGYAIVNGNGQHIHNGNENSASG 67
Query: 156 KQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEG 335
N + + +E P ++ R T+ YMTKYERAR+LGTRALQISMNAP++V+LEG
Sbjct: 68 DPNAGASKGKVMLQQREKKVPNDQ-RTTTPYMTKYERARVLGTRALQISMNAPILVDLEG 126
Query: 336 ETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
ETDPL+IA+KEL ++KIP +RRYLPDG YEDW +EL+
Sbjct: 127 ETDPLQIALKELAQKKIPLIVRRYLPDGWYEDWTCEELL 165
[134][TOP]
>UniRef100_C0S1F6 DNA-directed RNA polymerases I n=1 Tax=Paracoccidioides
brasiliensis Pb03 RepID=C0S1F6_PARBP
Length = 165
Score = 122 bits (305), Expect = 3e-26
Identities = 70/159 (44%), Positives = 90/159 (56%), Gaps = 32/159 (20%)
Frame = +3
Query: 72 DYEDID-MGYEEEPPEPE-------------------------------IEEGAEEEDPD 155
D+ED D G++ EPPE E I G E
Sbjct: 8 DHEDHDDAGFDYEPPEYEYIDNEPEDYIEPEQAEQGDQGYAIVNGNGQHIHNGNENAASG 67
Query: 156 KQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEG 335
N + + +E P ++ R T+ YMTKYERAR+LGTRALQISMNAP++V+LEG
Sbjct: 68 DPNAGASKGKVMLQQREKKVPNDQ-RTTTPYMTKYERARVLGTRALQISMNAPILVDLEG 126
Query: 336 ETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
ETDPL+IA+KEL ++KIP +RRYLPDG YEDW +EL+
Sbjct: 127 ETDPLQIALKELAQKKIPLIVRRYLPDGWYEDWTCEELL 165
[135][TOP]
>UniRef100_A7EPQ8 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
1980 UF-70 RepID=A7EPQ8_SCLS1
Length = 165
Score = 122 bits (305), Expect = 3e-26
Identities = 67/162 (41%), Positives = 95/162 (58%), Gaps = 34/162 (20%)
Frame = +3
Query: 69 DDYEDIDMGYE-----EEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEA-------- 209
DD D D G+ +EP EP+ + E+ + ++D + T++ +
Sbjct: 3 DDEGDYDGGFSPAYDADEPEEPDYDPEGIEDTNNVSTGEVDDVAVSTQNPDQLLTTGERG 62
Query: 210 --------------------DQPVERPRRTSK-YMTKYERARILGTRALQISMNAPVMVE 326
D+ + + +RT+ YMTKYERARILGTRALQISMNAP++V+
Sbjct: 63 VVTSGDLHAANRAKSNIAPKDKKIPKEQRTTTPYMTKYERARILGTRALQISMNAPILVD 122
Query: 327 LEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
EGETDPL+IA+KELR++KIP +RRY+PDG YEDW +EL+
Sbjct: 123 QEGETDPLQIAIKELRDKKIPLIVRRYMPDGWYEDWTCEELL 164
[136][TOP]
>UniRef100_B2WBI5 DNA-directed RNA polymerases I n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2WBI5_PYRTR
Length = 163
Score = 121 bits (304), Expect = 3e-26
Identities = 67/148 (45%), Positives = 90/148 (60%), Gaps = 17/148 (11%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIE---------------- 191
M DD D D E + + E ++ EDPD + + D +
Sbjct: 16 MGDDHAIDFDEEAEPDLMDDEDDQPGGGEDPDNADPNDDNVVVSGDANAAAAAKEASKNT 75
Query: 192 -TEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKE 368
T +K+ P E+ R T+ YMTKYE+AR+LGTRALQIS NAPV++++EG TDPL+IA KE
Sbjct: 76 VTSEKDKRVPNEK-RTTTPYMTKYEKARVLGTRALQISGNAPVLIDVEGMTDPLQIAAKE 134
Query: 369 LRERKIPFTIRRYLPDGSYEDWGVDELI 452
L+E+KIP +RRYLPDG YEDW +EL+
Sbjct: 135 LQEKKIPLVVRRYLPDGFYEDWTCEELL 162
[137][TOP]
>UniRef100_A6RVU8 DNA-directed RNA polymerases I, II, and III n=1 Tax=Botryotinia
fuckeliana B05.10 RepID=A6RVU8_BOTFB
Length = 163
Score = 121 bits (303), Expect = 4e-26
Identities = 67/160 (41%), Positives = 95/160 (59%), Gaps = 32/160 (20%)
Frame = +3
Query: 69 DDYEDIDMGYE---EEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEA---------- 209
DD E+ D G+ +E EPE + E+ + ++D + T++ +
Sbjct: 3 DDEENYDGGFSPAYDEAEEPEYDPEGMEDINNVSTGEVDDVAVSTQNPDQLLTTGERGVV 62
Query: 210 ------------------DQPVERPRRTSK-YMTKYERARILGTRALQISMNAPVMVELE 332
D+ + + +RT+ YMTKYERARILGTRALQISMNAP++V+ E
Sbjct: 63 TSGDLHAANRAKSNIAPKDKKIPKEQRTTTPYMTKYERARILGTRALQISMNAPILVDQE 122
Query: 333 GETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
GETDPL+IA+KELR++KIP +RRY+PDG YEDW +EL+
Sbjct: 123 GETDPLQIAIKELRDKKIPLIVRRYMPDGWYEDWTCEELL 162
[138][TOP]
>UniRef100_A2Q8H6 Contig An01c0150, complete genome n=1 Tax=Aspergillus niger CBS
513.88 RepID=A2Q8H6_ASPNC
Length = 160
Score = 120 bits (302), Expect = 6e-26
Identities = 55/74 (74%), Positives = 67/74 (90%)
Frame = +3
Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410
R+T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGETDPL+IA+KEL ++KIP +RRYL
Sbjct: 87 RQTTPYMTKYERARVLGTRALQISMNAPVLVDLEGETDPLQIAIKELNQKKIPLIVRRYL 146
Query: 411 PDGSYEDWGVDELI 452
PDG YEDW +EL+
Sbjct: 147 PDGWYEDWTCEELL 160
[139][TOP]
>UniRef100_Q4Q3B6 DNA-directed RNA polymerase subunit, putative n=1 Tax=Leishmania
major RepID=Q4Q3B6_LEIMA
Length = 159
Score = 120 bits (301), Expect = 7e-26
Identities = 69/141 (48%), Positives = 92/141 (65%), Gaps = 10/141 (7%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIE---EGAEEEDPD---KQNDDLDAEPIETEDKEADQPVE- 224
+DD +++G + + + + GA+EED + + +D+ A I + + +A +
Sbjct: 7 EDDLLSLNLGDDRDEGDSGSDIRHSGADEEDEEGGEQLPEDVAANVILSGNAQAAKGARA 66
Query: 225 ---RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 395
R TS MTKYERAR+LGTRALQISMNAPV V LEGETDPL IA+KELRER+ P
Sbjct: 67 RGINERVTSAVMTKYERARVLGTRALQISMNAPVAVALEGETDPLTIAVKELRERRTPLI 126
Query: 396 IRRYLPDGSYEDWGVDELIVE 458
IRR LPD +YEDW V EL+V+
Sbjct: 127 IRRVLPDNTYEDWSVSELLVD 147
[140][TOP]
>UniRef100_A4I9P6 DNA-directed RNA polymerase subunit, putative n=1 Tax=Leishmania
infantum RepID=A4I9P6_LEIIN
Length = 159
Score = 120 bits (300), Expect = 1e-25
Identities = 69/141 (48%), Positives = 92/141 (65%), Gaps = 10/141 (7%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIE---EGAEEEDPD---KQNDDLDAEPIETEDKEADQPVE- 224
+DD +++G + + + + GA+EED + + +D+ A I + + +A +
Sbjct: 7 EDDLLSLNLGGDRDEGDSGSDIRHSGADEEDEEGGEQLPEDVAANIILSGNAQAAKGARA 66
Query: 225 ---RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 395
R TS MTKYERAR+LGTRALQISMNAPV V LEGETDPL IA+KELRER+ P
Sbjct: 67 RGINERVTSAVMTKYERARVLGTRALQISMNAPVAVALEGETDPLTIAVKELRERRTPLI 126
Query: 396 IRRYLPDGSYEDWGVDELIVE 458
IRR LPD +YEDW V EL+V+
Sbjct: 127 IRRVLPDNTYEDWSVSELLVD 147
[141][TOP]
>UniRef100_A4HAK2 DNA-directed RNA polymerase subunit, putative n=1 Tax=Leishmania
braziliensis RepID=A4HAK2_LEIBR
Length = 159
Score = 120 bits (300), Expect = 1e-25
Identities = 72/142 (50%), Positives = 87/142 (61%), Gaps = 11/142 (7%)
Frame = +3
Query: 66 DDDYEDIDMG--YEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETE---------DKEAD 212
DDD +++G +E +I + +E+ D+ D L E I T K A
Sbjct: 7 DDDVLSLNLGDDRDEVNSSSDIHHSSGDEEDDEGGDQLP-EDIATNVVLSGNAQAAKGAR 65
Query: 213 QPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 392
R TS MTKYERAR+LGTRALQISMNAPV V LEGETDPL IA+KELRER+ P
Sbjct: 66 ARGINERVTSAVMTKYERARVLGTRALQISMNAPVAVALEGETDPLTIAIKELRERRTPL 125
Query: 393 TIRRYLPDGSYEDWGVDELIVE 458
IRR LPD +YEDW V EL+V+
Sbjct: 126 IIRRVLPDNTYEDWSVSELLVD 147
[142][TOP]
>UniRef100_A8Q970 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
7966 RepID=A8Q970_MALGO
Length = 146
Score = 119 bits (298), Expect = 2e-25
Identities = 67/135 (49%), Positives = 83/135 (61%), Gaps = 5/135 (3%)
Frame = +3
Query: 72 DYEDIDMGYEE-EPPEPEIEEGAEEEDPDKQNDD----LDAEPIETEDKEADQPVERPRR 236
DY D + ++ E EP EE +D D D+ A+ + + R
Sbjct: 12 DYFDEGVDFDAAEMDEPLNEEAGAGDDEDHFGDNEVVHSSADGNIPMNMDTSGKANSERI 71
Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416
T+ YMTKYE+ARILGTRALQISMNAPV+V EGE DPL IA KEL +KIP +RRYLPD
Sbjct: 72 TTPYMTKYEKARILGTRALQISMNAPVLVPTEGEMDPLAIAQKELLAKKIPLLVRRYLPD 131
Query: 417 GSYEDWGVDELIVED 461
G++EDW V ELI+ D
Sbjct: 132 GTFEDWSVSELIITD 146
[143][TOP]
>UniRef100_B0CRA1 Predicted protein (Fragment) n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0CRA1_LACBS
Length = 86
Score = 118 bits (296), Expect = 3e-25
Identities = 57/76 (75%), Positives = 66/76 (86%)
Frame = +3
Query: 225 RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
+ R T+ Y+TKYERARILGTRALQISMNAPV+V L+GETD L+IA+KEL +RKIP IRR
Sbjct: 11 KDRVTTPYLTKYERARILGTRALQISMNAPVLVPLDGETDALQIAIKELSQRKIPLIIRR 70
Query: 405 YLPDGSYEDWGVDELI 452
YLPDGS+EDW V ELI
Sbjct: 71 YLPDGSFEDWSVSELI 86
[144][TOP]
>UniRef100_B2AX93 Predicted CDS Pa_7_9740 n=1 Tax=Podospora anserina
RepID=B2AX93_PODAN
Length = 153
Score = 117 bits (293), Expect = 6e-25
Identities = 65/138 (47%), Positives = 87/138 (63%), Gaps = 29/138 (21%)
Frame = +3
Query: 96 YEEEPPEPEIEEGAEEEDPDK-----QNDDLDAEPIE----------------------- 191
+ ++ +P +E A EEDPD+ ++D+ D P+
Sbjct: 4 FGDDDRDPIADEPAFEEDPDEYYEPVEDDEADNRPVGDDEDPNQVVNSGDPNAAANHGKG 63
Query: 192 TEDKEADQPVERP-RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKE 368
TE D+ + R+T+ YMTKYE+ARILGTRALQISMNAPV+V+LEGETDPL+IA+KE
Sbjct: 64 TEKSHKDKKIPNDQRKTTPYMTKYEKARILGTRALQISMNAPVLVDLEGETDPLQIAIKE 123
Query: 369 LRERKIPFTIRRYLPDGS 422
LRE+KIP +RRY+PDGS
Sbjct: 124 LREKKIPLIVRRYMPDGS 141
[145][TOP]
>UniRef100_A8JD59 Subunit of DNA-directed RNA polymerase (Fragment) n=1
Tax=Chlamydomonas reinhardtii RepID=A8JD59_CHLRE
Length = 87
Score = 116 bits (290), Expect = 1e-24
Identities = 60/87 (68%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
Frame = +3
Query: 159 QNDDLDAEPIETEDKEADQPV-ERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEG 335
Q + + E ++ D +A Q R R T++YMTKYE+AR+LGTRALQISMNAPVMVEL G
Sbjct: 1 QEGEENIELLDHADGQAGQGGGPRQRITTRYMTKYEKARVLGTRALQISMNAPVMVELSG 60
Query: 336 ETDPLEIAMKELRERKIPFTIRRYLPD 416
ETDPLEIAMKELRE+K+PFTIRRYLPD
Sbjct: 61 ETDPLEIAMKELREKKVPFTIRRYLPD 87
[146][TOP]
>UniRef100_UPI000023F027 hypothetical protein FG06683.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F027
Length = 139
Score = 115 bits (288), Expect = 2e-24
Identities = 63/124 (50%), Positives = 80/124 (64%), Gaps = 6/124 (4%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPV------ER 227
D YED ++ +P + E +E D + D I K D+ + E
Sbjct: 16 DAMYEDEEINDYYDPEPADDGENQQENQDDNIINSGDPSAIANAVKGGDRLLKDKKIPES 75
Query: 228 PRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRY 407
R T+ YMTKYERARILGTRALQISMNAPV+V+LEGETDPL+IA+KE+RE+KIP +RRY
Sbjct: 76 ERTTTPYMTKYERARILGTRALQISMNAPVLVDLEGETDPLQIAIKEMREKKIPLIVRRY 135
Query: 408 LPDG 419
+PDG
Sbjct: 136 MPDG 139
[147][TOP]
>UniRef100_B9G101 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9G101_ORYSJ
Length = 230
Score = 115 bits (287), Expect = 3e-24
Identities = 69/139 (49%), Positives = 79/139 (56%), Gaps = 36/139 (25%)
Frame = +3
Query: 60 MADDDYEDIDMG------------------------YEEEPPEPEIEE------------ 131
MA+DDY D+DMG YE+EPPEPEIEE
Sbjct: 1 MAEDDYNDMDMGCCQVCQQSGFIQNVRNYADFWVTRYEDEPPEPEIEEELCGLFTFSELE 60
Query: 132 GAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNA 311
GAEEE P+ N+D + + ED + RP +TSKYMTKYERARIL TRALQISMNA
Sbjct: 61 GAEEE-PENNNEDAVDDVVGAEDDREQEKTARPWKTSKYMTKYERARILSTRALQISMNA 119
Query: 312 PVMVELEGETDPLEIAMKE 368
PVMVELEG T PLE+ E
Sbjct: 120 PVMVELEGGTYPLEVEALE 138
[148][TOP]
>UniRef100_A9BK87 Rpabc6 n=1 Tax=Cryptophyta RepID=A9BK87_9CRYP
Length = 137
Score = 115 bits (287), Expect = 3e-24
Identities = 52/76 (68%), Positives = 67/76 (88%)
Frame = +3
Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410
R+T ++TKYE+ARILG RALQISM AP+M+E+EGETD L+IA KEL +RKIP T+RRYL
Sbjct: 62 RKTLPFLTKYEKARILGARALQISMGAPLMIEIEGETDALDIAAKELLKRKIPITLRRYL 121
Query: 411 PDGSYEDWGVDELIVE 458
P+G++EDW +DELI+E
Sbjct: 122 PNGTFEDWDLDELIIE 137
[149][TOP]
>UniRef100_C9ZMZ7 DNA-directed RNA polymerase subunit, putative n=1 Tax=Trypanosoma
brucei gambiense DAL972 RepID=C9ZMZ7_TRYBG
Length = 144
Score = 114 bits (284), Expect = 7e-24
Identities = 68/130 (52%), Positives = 79/130 (60%), Gaps = 10/130 (7%)
Frame = +3
Query: 99 EEEPPEPEIEEGAEEED---PDKQNDDLDA-------EPIETEDKEADQPVERPRRTSKY 248
E+E + G E E D + D DA P+ K D +R R T+
Sbjct: 6 EDEVDRLSLSIGDEHESVAQSDDERSDADAGVVVSGPAPVRGSAKRRD---DRDRVTAPV 62
Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428
+TKYERARILGTRALQISMNAPV+V LEGETDPL IA KELRE IP IRR LPD +YE
Sbjct: 63 LTKYERARILGTRALQISMNAPVLVALEGETDPLTIAQKELREGVIPLIIRRVLPDNTYE 122
Query: 429 DWGVDELIVE 458
DW + EL V+
Sbjct: 123 DWRICELDVD 132
[150][TOP]
>UniRef100_C4M6S1 DNA-directed RNA polymerases I, II, and III 23 kDa, putative n=1
Tax=Entamoeba histolytica HM-1:IMSS RepID=C4M6S1_ENTHI
Length = 122
Score = 113 bits (283), Expect = 9e-24
Identities = 62/99 (62%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Frame = +3
Query: 165 DDLDAEP-IETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGET 341
DDL + IE ++ + D R T+++MTKYE+AR+LGTRALQISMNAPV V L G T
Sbjct: 29 DDLGVDNYIEEKEIKGDD-----RTTTRFMTKYEKARVLGTRALQISMNAPVFVPLNGMT 83
Query: 342 DPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
D LEIAM EL+ KIPF IRR LP+GSYEDW V ELIVE
Sbjct: 84 DALEIAMAELKAGKIPFIIRRRLPNGSYEDWKVSELIVE 122
[151][TOP]
>UniRef100_B0EM77 DNA-directed RNA polymerases I, II, and III subunit RPABC2,
putative n=1 Tax=Entamoeba dispar SAW760
RepID=B0EM77_ENTDI
Length = 122
Score = 112 bits (280), Expect = 2e-23
Identities = 63/119 (52%), Positives = 77/119 (64%), Gaps = 6/119 (5%)
Frame = +3
Query: 120 EIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERP------RRTSKYMTKYERARILG 281
E + + D N+DL + + D D +E R T+++MTKYE+AR+LG
Sbjct: 6 EADNDSYSMSEDSNNEDLVIDYYD--DLGVDNYIEEKEIKGDDRTTTRFMTKYEKARVLG 63
Query: 282 TRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
TRALQISMNAPV V L G TD LEIAM EL+ KIPF IRR LP+GS+EDW V ELIVE
Sbjct: 64 TRALQISMNAPVFVPLNGMTDALEIAMAELKAGKIPFIIRRRLPNGSFEDWKVSELIVE 122
[152][TOP]
>UniRef100_Q4D0Y6 DNA-directed RNA polymerase subunit, putative n=1 Tax=Trypanosoma
cruzi RepID=Q4D0Y6_TRYCR
Length = 144
Score = 112 bits (279), Expect = 3e-23
Identities = 62/131 (47%), Positives = 79/131 (60%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSK 245
D D + + + + EE E + E+ + D + L D + R T+
Sbjct: 5 DGDDDRLSLNFGEEQEESTLRSDDEQSEGDGADVVLSGRAASGSAVRRDG---KDRVTAP 61
Query: 246 YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSY 425
+TKYERARILGTRALQISMNAPV+V LEGETDPL IA KELRE IP +RR LPD +Y
Sbjct: 62 VLTKYERARILGTRALQISMNAPVLVALEGETDPLIIAQKELREGVIPLIVRRVLPDNTY 121
Query: 426 EDWGVDELIVE 458
EDW + EL ++
Sbjct: 122 EDWRICELDID 132
[153][TOP]
>UniRef100_Q4DDD8 DNA-directed RNA polymerase subunit, putative n=1 Tax=Trypanosoma
cruzi RepID=Q4DDD8_TRYCR
Length = 144
Score = 111 bits (278), Expect = 3e-23
Identities = 62/131 (47%), Positives = 79/131 (60%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSK 245
D D + + + + EE E + E+ + D + L D + R T+
Sbjct: 5 DGDDDRLSLNFGEEQEESTLRSDDEQSEGDGADVVLSGRAASGTAVRRDG---KDRVTAP 61
Query: 246 YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSY 425
+TKYERARILGTRALQISMNAPV+V LEGETDPL IA KELRE IP +RR LPD +Y
Sbjct: 62 VLTKYERARILGTRALQISMNAPVLVALEGETDPLIIAQKELREGVIPLIVRRVLPDNTY 121
Query: 426 EDWGVDELIVE 458
EDW + EL ++
Sbjct: 122 EDWRICELDID 132
[154][TOP]
>UniRef100_C8VJX8 DNA-directed RNA polymerase I, II, and III subunit Rpb6
(AFU_orthologue; AFUA_1G05160) n=2 Tax=Emericella
nidulans RepID=C8VJX8_EMENI
Length = 198
Score = 111 bits (278), Expect = 3e-23
Identities = 68/141 (48%), Positives = 84/141 (59%), Gaps = 17/141 (12%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAE--EE---------------DPDKQNDDLDAEPIET 194
D Y+DI+ P + E EEGAE EE DP+ E
Sbjct: 19 DQTYDDIEPEDFLNPEDIEGEEGAEGYEEGYGGAVNGERVVVSGDPNAGYSGKVVEQARA 78
Query: 195 EDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR 374
+ DQ R T+ YMTKYERAR+LGTRALQIS+NAPV+V+LEGETDPL+IAMKEL
Sbjct: 79 KKIPNDQ-----RTTTPYMTKYERARVLGTRALQISLNAPVLVDLEGETDPLQIAMKELA 133
Query: 375 ERKIPFTIRRYLPDGSYEDWG 437
++KIP +RRYLPDG+ +G
Sbjct: 134 QKKIPLIVRRYLPDGTEAAYG 154
[155][TOP]
>UniRef100_C9ZMZ5 DNA-directed RNA polymerase subunit, putative n=3 Tax=Trypanosoma
brucei RepID=C9ZMZ5_TRYBG
Length = 144
Score = 111 bits (277), Expect = 5e-23
Identities = 59/92 (64%), Positives = 67/92 (72%)
Frame = +3
Query: 183 PIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAM 362
P+ K D +R R T+ +TKYERARILGTRALQISMNAPV+V LEGETDPL IA
Sbjct: 44 PVRGSAKRRD---DRDRVTAPVLTKYERARILGTRALQISMNAPVLVALEGETDPLTIAQ 100
Query: 363 KELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
KELRE IP IRR LPD +YEDW + EL V+
Sbjct: 101 KELREGVIPLIIRRVLPDNTYEDWRICELDVD 132
[156][TOP]
>UniRef100_A7AT24 DNA-directed RNA polymerase subunit I, putative n=1 Tax=Babesia
bovis RepID=A7AT24_BABBO
Length = 154
Score = 107 bits (268), Expect = 5e-22
Identities = 63/140 (45%), Positives = 86/140 (61%), Gaps = 28/140 (20%)
Frame = +3
Query: 123 IEEGAEEEDPDKQNDDLDAEPIE-----TEDKEADQPVERPRR-TSKYMTKYERARILGT 284
I+E A+EE+ + DD D + + T+ E Q VE R TS YMTKYE+ARI+GT
Sbjct: 15 IDEFADEEEEYDEFDDYDQQRVADVDIITDPNEYRQRVENAHRITSPYMTKYEKARIIGT 74
Query: 285 RALQISMNAPVMVELE--------------GET--------DPLEIAMKELRERKIPFTI 398
RALQIS+NAP+ + ++ GE+ DPL IA KEL ++ +PF I
Sbjct: 75 RALQISLNAPITIPVDASMDTVDEGITMGFGESVDTSAAAIDPLVIAEKELYQKSVPFII 134
Query: 399 RRYLPDGSYEDWGVDELIVE 458
RRYLP+GSYEDW ++ELI++
Sbjct: 135 RRYLPNGSYEDWKIEELIID 154
[157][TOP]
>UniRef100_C0NC81 DNA-directed RNA polymerase I n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NC81_AJECG
Length = 159
Score = 107 bits (268), Expect = 5e-22
Identities = 64/161 (39%), Positives = 90/161 (55%), Gaps = 31/161 (19%)
Frame = +3
Query: 63 ADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDL----------DAEPIET------ 194
A D E D G++ EPPE E + E+ + + + D +P++
Sbjct: 6 AGDHEEHDDAGFDYEPPEYEYIDNEPEDYVEPEQTEHGENGYAIVNGDGQPVQNGEGDVV 65
Query: 195 ---------------EDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVEL 329
+ +E P ++ R T+ YMTKYERAR+LGTRALQISMNAP++V+L
Sbjct: 66 SGDPNAGASKGKVMLQQREKKVPNDQ-RTTTPYMTKYERARVLGTRALQISMNAPILVDL 124
Query: 330 EGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
EGETDPL+IA+KEL ++KIP +RR YEDW +EL+
Sbjct: 125 EGETDPLQIALKELAQKKIPLIVRR------YEDWTCEELL 159
[158][TOP]
>UniRef100_Q962L7 PV1H14085_P n=1 Tax=Plasmodium vivax RepID=Q962L7_PLAVI
Length = 157
Score = 107 bits (266), Expect = 9e-22
Identities = 59/157 (37%), Positives = 92/157 (58%), Gaps = 22/157 (14%)
Frame = +3
Query: 54 LTMADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDA------EPIETEDKEADQ 215
++ A D + + + E++ E +G + +D D +D+D + +++ + +D
Sbjct: 1 MSTALDAFNENYLNDEDDFMGDEFGQGVDSDDGDNYENDIDIITENQIKKEKSDYEHSDV 60
Query: 216 PVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGE----------------TDP 347
+ R TS Y+TKYE+ARI+GTRALQIS+NAP+ + +E + DP
Sbjct: 61 NEDNIRITSPYLTKYEKARIIGTRALQISLNAPLTIPIETQGGEVSNGKNEYDNYLNNDP 120
Query: 348 LEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
L IA KEL + IPF +RRYLP+GSYEDW +DELI++
Sbjct: 121 LVIAEKELHNKSIPFILRRYLPNGSYEDWKLDELIID 157
[159][TOP]
>UniRef100_C6HAI4 DNA-directed RNA polymerase I n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HAI4_AJECH
Length = 159
Score = 106 bits (265), Expect = 1e-21
Identities = 63/161 (39%), Positives = 90/161 (55%), Gaps = 31/161 (19%)
Frame = +3
Query: 63 ADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDL----------DAEPIET------ 194
A D E D G++ EPP+ E + E+ + + + D +P++
Sbjct: 6 AGDHEEHDDAGFDYEPPQYEYIDNEPEDYVEPEQTEHGENGYAIVNGDGQPVQNGEGDVV 65
Query: 195 ---------------EDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVEL 329
+ +E P ++ R T+ YMTKYERAR+LGTRALQISMNAP++V+L
Sbjct: 66 SGDPNAGASKGKVMLQQREKKVPNDQ-RTTTPYMTKYERARVLGTRALQISMNAPILVDL 124
Query: 330 EGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
EGETDPL+IA+KEL ++KIP +RR YEDW +EL+
Sbjct: 125 EGETDPLQIALKELAQKKIPLIVRR------YEDWTCEELL 159
[160][TOP]
>UniRef100_UPI000007B5B4 DNA-directed RNA polymerase subunit I n=1 Tax=Plasmodium falciparum
3D7 RepID=UPI000007B5B4
Length = 163
Score = 106 bits (264), Expect = 1e-21
Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 24/154 (15%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDA---------EPIETEDKEADQPV 221
D + D + +E+ E +G + +D + +D+D + E+ EA++
Sbjct: 12 DGFNDNYLNEDEDFMGDEFGQGIDSDDGENYENDIDIITDHQIKKDNKSDYENSEANE-- 69
Query: 222 ERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETD---------------PLEI 356
+ R TS Y+TKYE+ARI+GTRALQISMNAP+ + +E D PL I
Sbjct: 70 DNIRITSPYLTKYEKARIIGTRALQISMNAPLTIPIETSNDMINSKNEYDNYLNNDPLVI 129
Query: 357 AMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
A KEL + IPF +RRYLP+GSYEDW +DELI++
Sbjct: 130 AEKELYNKSIPFILRRYLPNGSYEDWRLDELIID 163
[161][TOP]
>UniRef100_O77315 DNA-directed RNA polymerase subunit I, putative n=1 Tax=Plasmodium
falciparum 3D7 RepID=O77315_PLAF7
Length = 153
Score = 106 bits (264), Expect = 1e-21
Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 24/154 (15%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDA---------EPIETEDKEADQPV 221
D + D + +E+ E +G + +D + +D+D + E+ EA++
Sbjct: 2 DGFNDNYLNEDEDFMGDEFGQGIDSDDGENYENDIDIITDHQIKKDNKSDYENSEANE-- 59
Query: 222 ERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETD---------------PLEI 356
+ R TS Y+TKYE+ARI+GTRALQISMNAP+ + +E D PL I
Sbjct: 60 DNIRITSPYLTKYEKARIIGTRALQISMNAPLTIPIETSNDMINSKNEYDNYLNNDPLVI 119
Query: 357 AMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
A KEL + IPF +RRYLP+GSYEDW +DELI++
Sbjct: 120 AEKELYNKSIPFILRRYLPNGSYEDWRLDELIID 153
[162][TOP]
>UniRef100_A5KB50 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide,
putative n=1 Tax=Plasmodium vivax RepID=A5KB50_PLAVI
Length = 153
Score = 106 bits (264), Expect = 1e-21
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 22/152 (14%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDA------EPIETEDKEADQPVERP 230
D + + + E++ E +G + +D D +D+D + +++ + +D +
Sbjct: 2 DAFNENYLNDEDDFMGDEFGQGVDSDDGDNYENDIDIITENQIKKEKSDYEHSDVNEDNI 61
Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGE----------------TDPLEIAM 362
R TS Y+TKYE+ARI+GTRALQIS+NAP+ + +E + DPL IA
Sbjct: 62 RITSPYLTKYEKARIIGTRALQISLNAPLTIPIETQGGEVSNGKNEYDNYLNNDPLVIAE 121
Query: 363 KELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
KEL + IPF +RRYLP+GSYEDW +DELI++
Sbjct: 122 KELHNKSIPFILRRYLPNGSYEDWKLDELIID 153
[163][TOP]
>UniRef100_Q0CUQ1 DNA-directed RNA polymerases I n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0CUQ1_ASPTN
Length = 163
Score = 106 bits (264), Expect = 1e-21
Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 24/151 (15%)
Frame = +3
Query: 72 DYEDIDMGYEEEPPE----PEIEEGAE--------EEDPDKQNDD---LDAEP------- 185
DYE + ++E PE PE EGAE E N D + +P
Sbjct: 14 DYEPAEEVFDENEPEDYLNPEDVEGAEGGAENYDGESYAPAVNGDRVVVSGDPNAGYSGR 73
Query: 186 IETEDKEADQPVERPRRTSKYMTKYERARILGTRALQ--ISMNAPVMVELEGETDPLEIA 359
+ + +E P ++ R T+ YMTKYERAR+ G L SMNAPV+V+LEGETDPL+IA
Sbjct: 74 VMEQTREKKVPNDQ-RTTTPYMTKYERARLFGGFILTGAASMNAPVLVDLEGETDPLQIA 132
Query: 360 MKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
+KEL ++KIP +RRYLPDG YEDW +EL+
Sbjct: 133 IKELNQKKIPLIVRRYLPDGYYEDWTCEELL 163
[164][TOP]
>UniRef100_B3L4G7 Dna-directed rna polymerase subunit i, putative n=1 Tax=Plasmodium
knowlesi strain H RepID=B3L4G7_PLAKH
Length = 158
Score = 105 bits (263), Expect = 2e-21
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 22/152 (14%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDA------EPIETEDKEADQPVERP 230
D + + + E++ E +G + +D D +D+D + +++ + +D +
Sbjct: 7 DGFNENYLNDEDDFMGDEFGQGVDSDDGDNYENDIDIITENQIKKEKSDYEHSDANEDNI 66
Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGE----------------TDPLEIAM 362
R TS Y+TKYE+ARI+GTRALQIS+NAP+ + +E + DPL IA
Sbjct: 67 RITSPYLTKYEKARIIGTRALQISLNAPLTIPIETQGGDVSNGKNEYDNYLNNDPLVIAE 126
Query: 363 KELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
+EL + IPF +RRYLP+GSYEDW +DELI++
Sbjct: 127 RELHNKSIPFILRRYLPNGSYEDWKLDELIID 158
[165][TOP]
>UniRef100_Q4XYQ9 DNA-directed RNA polymerase subunit I, putative n=1 Tax=Plasmodium
chabaudi RepID=Q4XYQ9_PLACH
Length = 156
Score = 105 bits (262), Expect = 2e-21
Identities = 62/158 (39%), Positives = 91/158 (57%), Gaps = 23/158 (14%)
Frame = +3
Query: 54 LTMADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDA--------EPIETEDKEA 209
+T A D Y D E++ E +G + ++ + +D+D E + E+ E
Sbjct: 1 MTYAVDLYNDNYGNDEDDFMGDEFGQGVDSDEGENYENDIDIIADNQIKKEKYDYENCEG 60
Query: 210 DQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETD--------------- 344
++ E R TS Y+TKYE+ARI+GTRALQIS+NAP+ + +E + D
Sbjct: 61 NE--ENIRITSPYLTKYEKARIIGTRALQISLNAPLTIPIETQNDKSNGKSDYDNYLNND 118
Query: 345 PLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
PL IA +EL + IPF +RRYLP+GSYEDW +DELI++
Sbjct: 119 PLVIAERELYNKSIPFILRRYLPNGSYEDWRLDELIID 156
[166][TOP]
>UniRef100_UPI00006CFA18 RNA polymerases K / 14 to 18 kDa subunit family protein n=1
Tax=Tetrahymena thermophila RepID=UPI00006CFA18
Length = 163
Score = 105 bits (261), Expect = 3e-21
Identities = 59/143 (41%), Positives = 83/143 (58%), Gaps = 12/143 (8%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQN-----------DDLDAEPIETEDKEADQ 215
DD +D D EE +EG +D D D+ E + +D++ DQ
Sbjct: 22 DDMDDGDQESEEASSRSG-DEGDSADDSDHSGTESESQSEVDKDEYPEEMVIIKDQDRDQ 80
Query: 216 PVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEG-ETDPLEIAMKELRERKIPF 392
+ + T ++TKYE+ARI+GTRALQI+ N+P+ VE + + DP+ IA KE ++KIPF
Sbjct: 81 QASKTKVTPPFLTKYEKARIIGTRALQIAQNSPIYVETDDKDYDPIAIAEKEFVQKKIPF 140
Query: 393 TIRRYLPDGSYEDWGVDELIVED 461
IRRYLP+ YEDW +DEL V D
Sbjct: 141 IIRRYLPNKEYEDWALDELEVLD 163
[167][TOP]
>UniRef100_Q86EM4 Clone ZZD193 mRNA sequence n=1 Tax=Schistosoma japonicum
RepID=Q86EM4_SCHJA
Length = 123
Score = 105 bits (261), Expect = 3e-21
Identities = 59/121 (48%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Frame = +3
Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQND-DLDAEPIETEDKEADQPVERPRR-TS 242
D+Y ID +E P E+ + + PD D P + + PVE+ +R T+
Sbjct: 3 DEYGGIDDFESDEEPLDEVPDDDLDTKPDGVTYITTDEVPRLSSGQSLAAPVEKSKRITT 62
Query: 243 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 422
Y+TKYERAR+LG RALQ+SM+APVMVEL+GE DPL+IA KELR KIP IRR+LPD
Sbjct: 63 PYLTKYERARVLGARALQLSMSAPVMVELDGERDPLKIAEKELRANKIPIIIRRFLPDWE 122
Query: 423 Y 425
+
Sbjct: 123 F 123
[168][TOP]
>UniRef100_A0CLZ3 Chromosome undetermined scaffold_21, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0CLZ3_PARTE
Length = 156
Score = 103 bits (258), Expect = 7e-21
Identities = 50/121 (41%), Positives = 79/121 (65%), Gaps = 4/121 (3%)
Frame = +3
Query: 99 EEEPPEPEIEEGAEEEDPDKQNDDLDAEPIET----EDKEADQPVERPRRTSKYMTKYER 266
++E + +G E D +D+ + + I T + + + ++ R T ++TKYER
Sbjct: 32 QDEEMDTSQSKGQESVTSDSSDDEDENQIIRTGAMIQQSKGRKVLKNERITPPFLTKYER 91
Query: 267 ARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDE 446
AR++GTRALQIS N+P+ V+ + TDP+++A +EL E KIPF IRRYLP+G++EDW + E
Sbjct: 92 ARVIGTRALQISKNSPIYVDPKETTDPIQVAQQELNENKIPFIIRRYLPNGNFEDWELQE 151
Query: 447 L 449
L
Sbjct: 152 L 152
[169][TOP]
>UniRef100_C7YNT4 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI
77-13-4 RepID=C7YNT4_NECH7
Length = 161
Score = 103 bits (257), Expect = 9e-21
Identities = 66/158 (41%), Positives = 82/158 (51%), Gaps = 31/158 (19%)
Frame = +3
Query: 72 DYEDIDMG--------YEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPV-- 221
D+ D D+G YE+E + EED D +N D E ++ D
Sbjct: 3 DFGDDDVGGAGGDEPMYEDEEVTEYYDPEVVEEDEDGENRPQDGEDMDNVVVSGDPSAAA 62
Query: 222 ----------------ERPRRTSKYMTKYERARILGTRALQISM-----NAPVMVELEGE 338
E R T+ YMTKYERARILGTRALQI +A L GE
Sbjct: 63 NALKGGEKLLKDKKIPEGERTTTPYMTKYERARILGTRALQIRFAFLERDASRPGWLTGE 122
Query: 339 TDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
TDPL+IA+KE+RE+KIP +RRYLPDG YEDW +EL+
Sbjct: 123 TDPLQIAIKEMREKKIPLIVRRYLPDGYYEDWTCEELL 160
[170][TOP]
>UniRef100_Q4U9K3 RNA polymerase common subunit (Rpb6 homologue), putative n=1
Tax=Theileria annulata RepID=Q4U9K3_THEAN
Length = 153
Score = 103 bits (256), Expect = 1e-20
Identities = 58/139 (41%), Positives = 82/139 (58%), Gaps = 27/139 (19%)
Frame = +3
Query: 123 IEEGAEEEDPDKQNDDLDAEPIE-----TEDKEADQPVERPRR-TSKYMTKYERARILGT 284
I+E AEEE+ ++ D + T+ E V+ R TS Y+TKYE+ARI+GT
Sbjct: 15 IDEFAEEEEDFADFEEYDQRRVSDVDIITDPTEFKTQVDSAHRITSPYLTKYEKARIIGT 74
Query: 285 RALQISMNAPVMVELEGET---------------------DPLEIAMKELRERKIPFTIR 401
RALQIS+NAP+ + ++G + DPL IA KEL ++ +PF +R
Sbjct: 75 RALQISLNAPITIPIDGPSEANDDGFTTLGDFGDTQTTAIDPLIIAEKELYQKTVPFIVR 134
Query: 402 RYLPDGSYEDWGVDELIVE 458
RYLP+GSYEDW +DELI++
Sbjct: 135 RYLPNGSYEDWKIDELIID 153
[171][TOP]
>UniRef100_A6R5F6 DNA-directed RNA polymerases I n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6R5F6_AJECN
Length = 177
Score = 103 bits (256), Expect = 1e-20
Identities = 63/173 (36%), Positives = 90/173 (52%), Gaps = 43/173 (24%)
Frame = +3
Query: 63 ADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDL----------DAEPIET------ 194
A D E D G++ EPPE E + E+ + + + D +P++
Sbjct: 6 AGDHEEHDDAGFDYEPPEYEYIDNEPEDYVEPEQTEHGENGYAIVNGDGQPVQNGEGDVV 65
Query: 195 ---------------EDKEADQPVERPRRTSKYMTKYERARILGTRALQI---------- 299
+ +E P ++ R T+ YMTKYERAR+ T +L
Sbjct: 66 SGDPNAGASKGKVMLQQREKKVPNDQ-RTTTPYMTKYERARVFHTISLSAWRIVSSVLTR 124
Query: 300 --SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452
SMNAP++V+LEGETDPL+IA+KEL ++KIP +RRYLPDG YEDW +EL+
Sbjct: 125 VDSMNAPILVDLEGETDPLQIALKELAQKKIPLIVRRYLPDGWYEDWTCEELL 177
[172][TOP]
>UniRef100_Q7RPV3 Plasmodium vivax PV1H14085_P n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RPV3_PLAYO
Length = 137
Score = 100 bits (249), Expect = 8e-20
Identities = 55/136 (40%), Positives = 82/136 (60%), Gaps = 23/136 (16%)
Frame = +3
Query: 120 EIEEGAEEEDPDKQNDDLDA--------EPIETEDKEADQPVERPRRTSKYMTKYERARI 275
E +G + ++ + +D+D + + E+ E ++ E R TS Y+TKYE+ARI
Sbjct: 4 EFGQGVDSDEGENYENDIDIIADNQIKKDKYDYENCEGNE--ENIRITSPYLTKYEKARI 61
Query: 276 LGTRALQISMNAPVMVELEGETD---------------PLEIAMKELRERKIPFTIRRYL 410
+GTRALQIS+NAP+ + +E + D PL IA +EL + IPF +RRYL
Sbjct: 62 IGTRALQISLNAPLTIPIETQNDKSNGKSDYDNYLNNDPLVIAERELYNKSIPFILRRYL 121
Query: 411 PDGSYEDWGVDELIVE 458
P+GSYEDW +DELI++
Sbjct: 122 PNGSYEDWRLDELIID 137
[173][TOP]
>UniRef100_Q98RN6 DNA-DIRECTED RNA POLYMERASES I, II, AND III 15 KD
POLYPEPTIDE(RPABC6) n=1 Tax=Guillardia theta
RepID=Q98RN6_GUITH
Length = 126
Score = 100 bits (248), Expect = 1e-19
Identities = 48/76 (63%), Positives = 59/76 (77%)
Frame = +3
Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410
R T +TKYE+ARILG RALQISM AP++ E+ +D L+IA KEL ERKIP TIRRYL
Sbjct: 51 RMTLPILTKYEKARILGARALQISMGAPILTEVNTLSDSLDIASKELYERKIPITIRRYL 110
Query: 411 PDGSYEDWGVDELIVE 458
P+G YEDW ++ELI +
Sbjct: 111 PNGRYEDWKIEELIFD 126
[174][TOP]
>UniRef100_A8N2F4 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8N2F4_COPC7
Length = 151
Score = 98.6 bits (244), Expect = 3e-19
Identities = 55/109 (50%), Positives = 69/109 (63%)
Frame = +3
Query: 132 GAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNA 311
GA E D D++ + DA P + QP + R T+ Y+TKYERARIL
Sbjct: 56 GANEGDQDQEMANGDAAPAAAPTQAERQP-NKVRVTTPYLTKYERARIL----------- 103
Query: 312 PVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
V+V L+GETD L+IA+KEL +RKIP IRRYLPDGS+EDW V ELI +
Sbjct: 104 -VLVPLDGETDALQIAIKELSQRKIPLIIRRYLPDGSFEDWSVSELITD 151
[175][TOP]
>UniRef100_A0CFC7 Chromosome undetermined scaffold_175, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0CFC7_PARTE
Length = 156
Score = 98.2 bits (243), Expect = 4e-19
Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 12/140 (8%)
Frame = +3
Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKE---ADQPVERPRR 236
DD+ + +G EE EPE+ + K+ + +E E+++ + P+ + R
Sbjct: 15 DDNSQSHSIGGEEL--EPEVSGITSSDVDSKERQSVTSESDSEEEQQIVRSGAPLSQSRG 72
Query: 237 ---------TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIP 389
T ++TKYERAR++GTRALQIS N+P+ V+ + TDP+ +A +EL E KIP
Sbjct: 73 KKVNKDERITPPFLTKYERARVIGTRALQISKNSPIYVDPKETTDPILVAQQELNENKIP 132
Query: 390 FTIRRYLPDGSYEDWGVDEL 449
F IRRY P+G++EDW + EL
Sbjct: 133 FIIRRYWPNGNFEDWELQEL 152
[176][TOP]
>UniRef100_Q4N107 Putative uncharacterized protein n=1 Tax=Theileria parva
RepID=Q4N107_THEPA
Length = 391
Score = 97.8 bits (242), Expect = 5e-19
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 21/97 (21%)
Frame = +3
Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGET---------------------DP 347
R TS Y+TKYE+ARI+GTRALQIS+NAP+ + ++G + DP
Sbjct: 295 RITSPYLTKYEKARIIGTRALQISLNAPITIPIDGPSEATDDGFTTLGDFGDTQTTAIDP 354
Query: 348 LEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
L IA KEL ++ +PF +RRYLP+GSYEDW +DELI++
Sbjct: 355 LIIAEKELYQKTVPFIVRRYLPNGSYEDWKIDELIID 391
[177][TOP]
>UniRef100_Q8SRE9 DNA-DIRECTED RNA POLYMERASE I n=1 Tax=Encephalitozoon cuniculi
RepID=Q8SRE9_ENCCU
Length = 144
Score = 95.1 bits (235), Expect = 3e-18
Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Frame = +3
Query: 138 EEEDPDKQND----DLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISM 305
++ED D N+ +++ E +E D R+T MTKYE+A ++G RA Q+S
Sbjct: 30 DKEDVDSVNEYSTEEINMEVLEISDAGMKIKASE-RKTLPRMTKYEKAHVIGVRATQLSA 88
Query: 306 NAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIV 455
AP V++ ET+PL IA EL E+KIPF IRR LPD S+EDW VDEL++
Sbjct: 89 GAPPFVDIGNETNPLNIANMELSEKKIPFIIRRKLPDSSFEDWAVDELMI 138
[178][TOP]
>UniRef100_A2E3F1 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide,
putative n=1 Tax=Trichomonas vaginalis G3
RepID=A2E3F1_TRIVA
Length = 94
Score = 94.4 bits (233), Expect = 6e-18
Identities = 43/77 (55%), Positives = 60/77 (77%)
Frame = +3
Query: 225 RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
+P T++Y+TKYE+AR+LG RA+QI+ APV +++ E DPL IA +EL+++K P IRR
Sbjct: 11 KPVNTTEYLTKYEKARVLGIRAMQIANGAPVQIDIGSEVDPLNIAEEELKQKKTPLIIRR 70
Query: 405 YLPDGSYEDWGVDELIV 455
LPDG+YED V+ELIV
Sbjct: 71 TLPDGTYEDVAVNELIV 87
[179][TOP]
>UniRef100_A2DSU3 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide,
putative n=1 Tax=Trichomonas vaginalis G3
RepID=A2DSU3_TRIVA
Length = 94
Score = 94.4 bits (233), Expect = 6e-18
Identities = 43/77 (55%), Positives = 60/77 (77%)
Frame = +3
Query: 225 RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
+P T++Y+TKYE+AR+LG RA+QI+ APV +++ E DPL IA +EL+++K P IRR
Sbjct: 11 KPINTTEYLTKYEKARVLGIRAMQIANGAPVQIDIGSEVDPLNIAEEELKQKKTPLIIRR 70
Query: 405 YLPDGSYEDWGVDELIV 455
LPDG+YED V+ELIV
Sbjct: 71 TLPDGTYEDVAVNELIV 87
[180][TOP]
>UniRef100_B6QNS4 DNA-directed RNA polymerase I, II, and III subunit Rpb6 n=1
Tax=Penicillium marneffei ATCC 18224 RepID=B6QNS4_PENMQ
Length = 141
Score = 93.6 bits (231), Expect = 1e-17
Identities = 60/134 (44%), Positives = 77/134 (57%), Gaps = 30/134 (22%)
Frame = +3
Query: 72 DYEDIDMGYEEEPPEPEIEEGAEE-----EDPDKQNDDLDA-------------EPIETE 197
D+E D GY+ + EPE ++ E ED D + D A I +
Sbjct: 6 DHEAEDGGYDYDAGEPEYDDNEPEDFLEPEDVDVEGDQAAAAAEDVYQGAVNGERTIISG 65
Query: 198 DKEA-------DQPVERP-----RRTSKYMTKYERARILGTRALQISMNAPVMVELEGET 341
D A +QP E+ R T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGET
Sbjct: 66 DPNAGGGRGVMEQPREKKIPNDQRSTTPYMTKYERARVLGTRALQISMNAPVLVDLEGET 125
Query: 342 DPLEIAMKELRERK 383
DPL+IA+KEL ++K
Sbjct: 126 DPLQIALKELNQKK 139
[181][TOP]
>UniRef100_A2FZ94 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide,
putative n=1 Tax=Trichomonas vaginalis G3
RepID=A2FZ94_TRIVA
Length = 85
Score = 89.0 bits (219), Expect = 2e-16
Identities = 43/77 (55%), Positives = 55/77 (71%)
Frame = +3
Query: 225 RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
RPR T+ Y+TKYERAR+LGTR +QIS+ APV ++ TDP+ IA KEL ++P IRR
Sbjct: 9 RPRITTPYLTKYERARVLGTRGMQISLGAPVTIDAGDLTDPIAIAEKELEAGQLPLIIRR 68
Query: 405 YLPDGSYEDWGVDELIV 455
YLP+ YED V LI+
Sbjct: 69 YLPNHEYEDVAVKYLII 85
[182][TOP]
>UniRef100_UPI000194E6EC PREDICTED: polymerase (RNA) II (DNA directed) polypeptide F,
partial n=1 Tax=Taeniopygia guttata RepID=UPI000194E6EC
Length = 101
Score = 88.2 bits (217), Expect = 4e-16
Identities = 56/109 (51%), Positives = 66/109 (60%)
Frame = +3
Query: 48 LPLTMADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVER 227
L L + DD++D+ EE E E AEEE E +E Q +
Sbjct: 7 LSLQLDVDDFDDV-----EEDEGLEDLENAEEEGQ---------ENVEILPSGERQQANQ 52
Query: 228 PRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR 374
R T+ YMTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+
Sbjct: 53 KRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELK 101
[183][TOP]
>UniRef100_C9JK43 Putative uncharacterized protein POLR2F n=1 Tax=Homo sapiens
RepID=C9JK43_HUMAN
Length = 158
Score = 87.4 bits (215), Expect = 7e-16
Identities = 51/96 (53%), Positives = 63/96 (65%), Gaps = 11/96 (11%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272
E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 380
+LGTRALQI+M APVMVELEGETDPL IAMKEL R
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELNAR 100
[184][TOP]
>UniRef100_B0QYL9 Polymerase (RNA) II (DNA directed) polypeptide F n=1 Tax=Homo
sapiens RepID=B0QYL9_HUMAN
Length = 158
Score = 87.4 bits (215), Expect = 7e-16
Identities = 51/96 (53%), Positives = 63/96 (65%), Gaps = 11/96 (11%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272
E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 380
+LGTRALQI+M APVMVELEGETDPL IAMKEL R
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELNAR 100
[185][TOP]
>UniRef100_C1BXG2 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1
Tax=Esox lucius RepID=C1BXG2_ESOLU
Length = 98
Score = 87.0 bits (214), Expect = 9e-16
Identities = 51/96 (53%), Positives = 67/96 (69%), Gaps = 9/96 (9%)
Frame = +3
Query: 114 EPEIEEGA-EEEDPDKQNDDLDAEPIETEDKEADQ--------PVERPRRTSKYMTKYER 266
E + ++G ++ + D+ DDL E +E +D+E Q + R T+ YMTKYER
Sbjct: 5 EGDFDDGDFDDAEEDEGLDDL--ENVEDDDQENVQILPAGEGSQANQKRITTPYMTKYER 62
Query: 267 ARILGTRALQISMNAPVMVELEGETDPLEIAMKELR 374
AR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+
Sbjct: 63 ARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELK 98
[186][TOP]
>UniRef100_UPI0000E25B17 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Pan
troglodytes RepID=UPI0000E25B17
Length = 126
Score = 86.7 bits (213), Expect = 1e-15
Identities = 50/94 (53%), Positives = 63/94 (67%), Gaps = 11/94 (11%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272
E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELR 374
+LGTRALQI+M APVMVELEGETDPL IAMKEL+
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELK 98
[187][TOP]
>UniRef100_B0QYL8 Polymerase (RNA) II (DNA directed) polypeptide F n=1 Tax=Homo
sapiens RepID=B0QYL8_HUMAN
Length = 126
Score = 86.7 bits (213), Expect = 1e-15
Identities = 50/94 (53%), Positives = 63/94 (67%), Gaps = 11/94 (11%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272
E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELR 374
+LGTRALQI+M APVMVELEGETDPL IAMKEL+
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELK 98
[188][TOP]
>UniRef100_A8BHD7 DNA-directed RNA polymerase II RPB6 n=2 Tax=Giardia intestinalis
RepID=A8BHD7_GIALA
Length = 104
Score = 86.3 bits (212), Expect = 2e-15
Identities = 46/97 (47%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Frame = +3
Query: 180 EPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELE---GETDPL 350
+P ++ K AD R T +Y+TK+E+ARILGTRA Q+SM AP + + G DPL
Sbjct: 11 QPFISKIKPADPD---KRITPRYLTKFEQARILGTRAYQLSMGAPAHITITDKGGHLDPL 67
Query: 351 EIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 461
+A +EL IP IRR+LPDG+YEDW + EL + D
Sbjct: 68 VLARRELANNAIPIIIRRHLPDGTYEDWKLSELHIID 104
[189][TOP]
>UniRef100_B7XI69 DNA-directed RNA polymerase, subunit K/omega n=1 Tax=Enterocytozoon
bieneusi H348 RepID=B7XI69_ENTBH
Length = 75
Score = 86.3 bits (212), Expect = 2e-15
Identities = 38/71 (53%), Positives = 56/71 (78%)
Frame = +3
Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428
MT YE+A+I+G RA Q+S +AP +V++ TD +EIA KEL E+K+PF +RR LP+GSYE
Sbjct: 1 MTIYEKAKIIGVRATQLSDDAPPLVDIGNLTDCIEIAKKELAEKKLPFIVRRVLPNGSYE 60
Query: 429 DWGVDELIVED 461
DW ++EL++ +
Sbjct: 61 DWKIEELLIPE 71
[190][TOP]
>UniRef100_C9IYL7 Putative uncharacterized protein POLR2F n=1 Tax=Homo sapiens
RepID=C9IYL7_HUMAN
Length = 111
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 11/93 (11%)
Frame = +3
Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272
E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64
Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKEL 371
+LGTRALQI+M APVMVELEGETDPL IAMKEL
Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKEL 97
[191][TOP]
>UniRef100_Q3LW93 DNA-directed RNA polymerase I, II and III n=1 Tax=Bigelowiella
natans RepID=Q3LW93_BIGNA
Length = 115
Score = 85.5 bits (210), Expect = 3e-15
Identities = 49/111 (44%), Positives = 68/111 (61%), Gaps = 11/111 (9%)
Frame = +3
Query: 150 PDKQNDDLDAEPIETEDKEAD-----------QPVERPRRTSKYMTKYERARILGTRALQ 296
P ++N + + + D E++ QP++R + +++K+E+A++LG RA Q
Sbjct: 3 PSQKNFNTSLKIFSSSDNESEIKNSIGKNYLRQPIKR--FSYPFISKFEKAKLLGVRAKQ 60
Query: 297 ISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDEL 449
IS P V LEGETDPL IA+KE RE KIP IRRY DGSYED+ V EL
Sbjct: 61 ISNGNPPTVPLEGETDPLLIALKEYRENKIPLKIRRYFSDGSYEDFFVWEL 111
[192][TOP]
>UniRef100_C6LWY4 DNA-directed RNA polymerase II RPB6 n=1 Tax=Giardia intestinalis
ATCC 50581 RepID=C6LWY4_GIALA
Length = 104
Score = 85.5 bits (210), Expect = 3e-15
Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Frame = +3
Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELE---GETDPLEIAMKELRERKIPFTIR 401
R T +Y+TK+E+ARILGTRA Q+SM AP + + G DPL +A +EL IP IR
Sbjct: 25 RITPRYLTKFEQARILGTRAYQLSMGAPAHITITDKGGHLDPLVLARRELANNAIPIIIR 84
Query: 402 RYLPDGSYEDWGVDELIVED 461
R+LPDG+YEDW + EL + D
Sbjct: 85 RHLPDGTYEDWKLSELHIID 104
[193][TOP]
>UniRef100_A9A2B7 RNA polymerase Rpb6 n=1 Tax=Nitrosopumilus maritimus SCM1
RepID=A9A2B7_NITMS
Length = 182
Score = 73.2 bits (178), Expect = 1e-11
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 31/165 (18%)
Frame = +3
Query: 42 NSLPLTMADDDYEDIDMGYEEEPPEPEIEEGA------------------EEEDPDKQND 167
N+ + +A+D+ + EE EPE+E A E +K+ D
Sbjct: 19 NTEVVEVAEDEIQST-----EEIAEPEVETNAGLNKALDTYRKLIEKKVDAEPLTEKEQD 73
Query: 168 DLDAEPIETEDKEADQ------PVERPRRTSKY------MTKYERARILGTRALQISMNA 311
DL+ + E E +E + PVE P +K +T++E+ARI+G RALQ+S+ A
Sbjct: 74 DLEKKIKEIESREIVETVEEHDPVEIPCEKNKVTIGPPTLTRFEKARIMGARALQLSLGA 133
Query: 312 PVMVELEGETD-PLEIAMKELRERKIPFTIRRYLPDGSYEDWGVD 443
P + + L+I+M+EL +R IP TIRR LP+G Y++ +D
Sbjct: 134 PPFIPIPKTARISLDISMEELEQRVIPITIRRVLPNGDYQNIPID 178
[194][TOP]
>UniRef100_B3T8Y5 Putative RNA polymerase Rpb6 n=1 Tax=uncultured marine
crenarchaeote HF4000_APKG6C9 RepID=B3T8Y5_9ARCH
Length = 168
Score = 72.8 bits (177), Expect = 2e-11
Identities = 43/121 (35%), Positives = 73/121 (60%), Gaps = 13/121 (10%)
Frame = +3
Query: 120 EIEEGAEEEDPDKQNDDLDAEPIETEDKEA---DQPVERPRRTSK---------YMTKYE 263
++ E E+ +K+ ++D E ++E D P ++ TSK +T++E
Sbjct: 45 KVRECGREDITEKEIAEIDKECEIIRNREIITKDIPHKKVEITSKDNQILIGPPMLTRFE 104
Query: 264 RARILGTRALQISMNAPVMVEL-EGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGV 440
+ARI+G RALQ+S+ APV +E+ + T LEIAM+EL+++ IP I+R LP+G Y++ +
Sbjct: 105 KARIMGARALQLSLGAPVFIEIPKNATTSLEIAMEELKQKVIPIVIKRTLPNGDYQNLPL 164
Query: 441 D 443
D
Sbjct: 165 D 165
[195][TOP]
>UniRef100_A0RUC3 DNA-directed RNA polymerase, subunit K/omega n=1 Tax=Cenarchaeum
symbiosum RepID=A0RUC3_CENSY
Length = 155
Score = 67.8 bits (164), Expect = 6e-10
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 24/148 (16%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEE------------EDPDKQNDDLDAEPIETEDK 203
M+D + +++ + E EPEI+ G + E ++Q ++L+ E +++
Sbjct: 1 MSDANDQELVVEGSEAAGEPEIDIGLSKALESYRRLAEVNELTEEQQEELEVRIKEIQER 60
Query: 204 EADQ--PVERPRRTSK---------YMTKYERARILGTRALQISMNAPVMVELEGET-DP 347
+ + V P+ + +T++E+ARI+G RALQ+S+ AP +E+ +
Sbjct: 61 DVIEIDTVHEPQELTSDKKILIGPPVLTRFEKARIMGARALQLSLGAPPFIEIPADARTS 120
Query: 348 LEIAMKELRERKIPFTIRRYLPDGSYED 431
L+IAM EL +R IP IRR LP+G Y++
Sbjct: 121 LDIAMGELEKRIIPIVIRRVLPNGDYQN 148
[196][TOP]
>UniRef100_Q6W391 Predicted DNA-directed RNA polymerase IIb n=1 Tax=uncultured
crenarchaeote DeepAnt-EC39 RepID=Q6W391_9CREN
Length = 168
Score = 67.4 bits (163), Expect = 7e-10
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 13/122 (10%)
Frame = +3
Query: 120 EIEEGAEEEDPDKQNDDLDAEPIETEDKEA---DQPVERPRRTSK---------YMTKYE 263
+I EG +E +KQ ++D E ++E D E TS +T++E
Sbjct: 45 KIREGDNKELTEKQIAEIDKECEIIRNREIITKDLQHEVVEITSDGGHVIVGPITLTRFE 104
Query: 264 RARILGTRALQISMNAPVMVEL-EGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGV 440
+ARI+G RALQ+S+ APV VE+ + T L+IAM+EL++R IP I+R LP+ Y++ +
Sbjct: 105 KARIMGARALQLSLGAPVFVEIPKNTTTSLQIAMEELKKRVIPIVIKRTLPNQDYQNIPL 164
Query: 441 DE 446
D+
Sbjct: 165 DK 166
[197][TOP]
>UniRef100_Q46CK9 DNA-directed RNA polymerase, subunit K n=1 Tax=Methanosarcina
barkeri str. Fusaro RepID=Q46CK9_METBF
Length = 60
Score = 65.9 bits (159), Expect = 2e-09
Identities = 30/51 (58%), Positives = 41/51 (80%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
T++ERARI+G RALQI+M APV+VE +G DPL +A+KEL+ IP T++R
Sbjct: 7 TRFERARIIGARALQIAMGAPVLVEDDGRLDPLNLAIKELKAGVIPITVKR 57
[198][TOP]
>UniRef100_Q8PW42 DNA-directed RNA polymerase subunit K n=1 Tax=Methanosarcina mazei
RepID=RPOK_METMA
Length = 83
Score = 63.5 bits (153), Expect = 1e-08
Identities = 29/51 (56%), Positives = 41/51 (80%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
T++ERARI+G RALQI+M APV+VE +G DPL +A++EL+ IP T++R
Sbjct: 30 TRFERARIVGARALQIAMGAPVLVEDDGRLDPLGVAIEELKAGVIPITVKR 80
[199][TOP]
>UniRef100_Q5UQ32 DNA-directed RNA polymerase subunit 6 n=1 Tax=Acanthamoeba
polyphaga mimivirus RepID=RPO6_MIMIV
Length = 396
Score = 63.2 bits (152), Expect = 1e-08
Identities = 49/174 (28%), Positives = 72/174 (41%), Gaps = 43/174 (24%)
Frame = +3
Query: 57 TMADDDYEDID-MGYEEEPPEPEIEEGAEEED---PDKQNDDLDAEPIETED-------- 200
T D+ + ID MG E+P +P +E E ED D N +++ + + ED
Sbjct: 86 TDGDEKFNPIDEMGEPEDPDDPSEQEEDEVEDLGSEDVDNVEIEDDAADIEDLDPELVDE 145
Query: 201 ---------------------KEADQPV----------ERPRRTSKYMTKYERARILGTR 287
E D + + R T +T YE RILGTR
Sbjct: 146 ARNSKSKQCYMKNLNKDFIALDEDDSGIYSKIEYKKIPDNERETDPILTYYEIVRILGTR 205
Query: 288 ALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDEL 449
A Q + A +++ P ++A EL + F +RR+LP YEDW +DEL
Sbjct: 206 AQQFNYGAKPLIKGVEGMHPAKMAFVELTAKMTSFIVRRHLPGKKYEDWRIDEL 259
[200][TOP]
>UniRef100_Q9YDJ9 DNA-directed RNA polymerase subunit K n=1 Tax=Aeropyrum pernix
RepID=RPOK_AERPE
Length = 89
Score = 62.8 bits (151), Expect = 2e-08
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = +3
Query: 246 YMTKYERARILGTRALQISMNAPVMVELE--GETDPLEIAMKELRERKIPFTIRRYLPDG 419
Y+TKYERARI+G RA Q+S+ AP +V+ E G +PL+IA E+ +P +I RYLP G
Sbjct: 7 YLTKYERARIIGVRAFQLSIGAPPLVDPERAGSRNPLDIARYEVDNGILPVSIYRYLPGG 66
Query: 420 SYEDWGVDELI 452
+ + L+
Sbjct: 67 GGQSLSLSRLV 77
[201][TOP]
>UniRef100_B6TIG7 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B6TIG7_MAIZE
Length = 47
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLD 176
MADDDY +IDMGYE+EPPEPEIEEGAEEE P+ D D
Sbjct: 1 MADDDYNEIDMGYEDEPPEPEIEEGAEEE-PENNEDAPD 38
[202][TOP]
>UniRef100_B6TDT8 Glycine-rich RNA-binding protein 2 n=1 Tax=Zea mays
RepID=B6TDT8_MAIZE
Length = 203
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +3
Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQND 167
MADDDY +IDMGYE+EPPEPEIEEGAEEE P+ D
Sbjct: 1 MADDDYNEIDMGYEDEPPEPEIEEGAEEE-PENNED 35
[203][TOP]
>UniRef100_Q8TT40 DNA-directed RNA polymerase subunit K n=1 Tax=Methanosarcina
acetivorans RepID=RPOK_METAC
Length = 60
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
T++ERARI+G RALQI+M APV+V+ +G DPL +A+ EL+ IP T++R
Sbjct: 7 TRFERARIVGARALQIAMGAPVLVDDDGRLDPLGVAIAELKAEIIPITVKR 57
[204][TOP]
>UniRef100_O26148 DNA-directed RNA polymerase subunit K n=1 Tax=Methanothermobacter
thermautotrophicus str. Delta H RepID=RPOK_METTH
Length = 61
Score = 61.6 bits (148), Expect = 4e-08
Identities = 28/55 (50%), Positives = 42/55 (76%)
Frame = +3
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
SK +T++ERAR++G RALQISM A +VE++ DP++IA KEL ++ +P +RR
Sbjct: 5 SKKLTRFERARLIGARALQISMGARPLVEIKESLDPVDIARKELEKKVMPLDVRR 59
[205][TOP]
>UniRef100_Q8TV21 DNA-directed RNA polymerase subunit K/omega n=1 Tax=Methanopyrus
kandleri RepID=Q8TV21_METKA
Length = 56
Score = 61.2 bits (147), Expect = 5e-08
Identities = 28/52 (53%), Positives = 40/52 (76%)
Frame = +3
Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
+T++E ARI+G RALQI+M +PV+VE+EG+ DPLEIA +E E +P + R
Sbjct: 4 LTRFEIARIVGARALQIAMGSPVLVEVEGDEDPLEIAKREFDEGVVPVVVIR 55
[206][TOP]
>UniRef100_A2BLA4 DNA-directed RNA polymerase subunit K n=1 Tax=Hyperthermus
butylicus DSM 5456 RepID=A2BLA4_HYPBU
Length = 102
Score = 61.2 bits (147), Expect = 5e-08
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Frame = +3
Query: 192 TEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEG-----ETDPLEI 356
TE+ ++ R + ++T++ERAR++G RALQISM APV++++E DP+ I
Sbjct: 3 TEEYNIEELKARIKIGPPWLTRFERARVIGVRALQISMGAPVLIDVEKLPRHVREDPVLI 62
Query: 357 AMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 461
A KEL +P TI RY G + + L+V D
Sbjct: 63 AKKELEIGVLPMTIVRYTRRGDVQPIPLKWLVVLD 97
[207][TOP]
>UniRef100_A3CWI4 DNA-directed RNA polymerase, subunit K n=1 Tax=Methanoculleus
marisnigri JR1 RepID=A3CWI4_METMJ
Length = 55
Score = 60.8 bits (146), Expect = 7e-08
Identities = 30/51 (58%), Positives = 41/51 (80%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
T+YERARI+G RALQISM APV+V+ +T+PLEIA++E + IP T++R
Sbjct: 5 TRYERARIIGARALQISMGAPVLVKTP-KTEPLEIALEEYDQDMIPITVKR 54
[208][TOP]
>UniRef100_A1RWX0 DNA-directed RNA polymerase subunit K n=1 Tax=Thermofilum pendens
Hrk 5 RepID=RPOK_THEPD
Length = 81
Score = 60.8 bits (146), Expect = 7e-08
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +3
Query: 246 YMTKYERARILGTRALQISMNAPVMVELEGE-TDPLEIAMKELRERKIPFTIRRYLPDGS 422
++T++ERARI+G RALQIS+ APV++++ E +DP+ IA KEL +P + R+ P+G
Sbjct: 7 WLTRFERARIIGIRALQISLGAPVLIQVSEELSDPITIAEKELELGLLPIIVVRWTPEGK 66
Query: 423 YED 431
++
Sbjct: 67 IQE 69
[209][TOP]
>UniRef100_O29134 DNA-directed RNA polymerase subunit K n=1 Tax=Archaeoglobus
fulgidus RepID=RPOK_ARCFU
Length = 75
Score = 60.5 bits (145), Expect = 9e-08
Identities = 28/51 (54%), Positives = 41/51 (80%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
T++E+ARI+G RALQI+M APV++E + +T+PLEIA++E IP T+RR
Sbjct: 12 TRFEKARIIGARALQIAMGAPVLIETD-KTEPLEIALEEFNRGVIPITVRR 61
[210][TOP]
>UniRef100_C8S9M9 RNA polymerase Rpb6 n=1 Tax=Ferroglobus placidus DSM 10642
RepID=C8S9M9_FERPL
Length = 73
Score = 59.7 bits (143), Expect = 2e-07
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
T++E+ARI+G RALQI+M APV++E + +TDPLEIA +E IP T++R
Sbjct: 10 TRFEKARIIGARALQIAMGAPVLIETD-KTDPLEIAKEEFERGVIPITVKR 59
[211][TOP]
>UniRef100_Q8ZTF9 DNA-directed RNA polymerase subunit K n=1 Tax=Pyrobaculum
aerophilum RepID=RPOK_PYRAE
Length = 106
Score = 59.7 bits (143), Expect = 2e-07
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +3
Query: 186 IETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELE--GETDPLEIA 359
I+ DK ++ P R +TKYE ARI+G RALQ++M A +V+++ G DP+ IA
Sbjct: 14 IDVVDKAINKREFYPPR----LTKYETARIIGARALQLAMGAQPLVDIQEVGSVDPVLIA 69
Query: 360 MKELRERKIPFTIRRYLPDG 419
M+ELR + F I R +PDG
Sbjct: 70 MEELRRGLLDFIIVREMPDG 89
[212][TOP]
>UniRef100_Q0W8C8 DNA-directed RNA polymerase, subunit K n=1 Tax=uncultured
methanogenic archaeon RC-I RepID=Q0W8C8_UNCMA
Length = 88
Score = 59.3 bits (142), Expect = 2e-07
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
T+YERARI+G RALQISM APV+ + +P+E+A+ EL + +P T+R+
Sbjct: 25 TRYERARIIGARALQISMGAPVLAKNPKTVEPIEVALLELEQGLVPITVRK 75
[213][TOP]
>UniRef100_B1Y9L9 RNA polymerase Rpb6 n=1 Tax=Thermoproteus neutrophilus V24Sta
RepID=B1Y9L9_THENV
Length = 109
Score = 59.3 bits (142), Expect = 2e-07
Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Frame = +3
Query: 249 MTKYERARILGTRALQISMNAPVMVELE--GETDPLEIAMKELRERKIPFTIRRYLPDGS 422
+TKYE ARILG RA+Q++M A +V++ G TDP+ IA +EL+ + F I R LPDG
Sbjct: 34 LTKYEIARILGARAMQLAMGAQPLVDVRELGTTDPVLIAAEELKRGLLDFIIVRELPDGK 93
Query: 423 YEDWGVDELI 452
E + EL+
Sbjct: 94 TERLRLKELL 103
[214][TOP]
>UniRef100_B8GEG0 RNA polymerase Rpb6 n=1 Tax=Methanosphaerula palustris E1-9c
RepID=B8GEG0_METPE
Length = 56
Score = 58.9 bits (141), Expect = 3e-07
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
T+YERARI+G R+LQISM AP++V ++DPLEIA++E + IP T++R
Sbjct: 5 TRYERARIIGARSLQISMGAPILVRTT-KSDPLEIALEEYNQGIIPITVKR 54
[215][TOP]
>UniRef100_B5IDF9 RNA polymerases K / 14 to 18 kDa subunit n=1 Tax=Aciduliprofundum
boonei T469 RepID=B5IDF9_9EURY
Length = 57
Score = 58.9 bits (141), Expect = 3e-07
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVEL-EGETDPLEIAMKELRERKIPFTIRR 404
T++E+ARI+G RALQISM APV++ L E DPL+IAM E + IP T++R
Sbjct: 4 TRFEKARIIGARALQISMGAPVLIHLPEDVADPLDIAMYEFEKGVIPITVKR 55
[216][TOP]
>UniRef100_B5IDB0 RNA polymerases K / 14 to 18 kDa subunit n=1 Tax=Aciduliprofundum
boonei T469 RepID=B5IDB0_9EURY
Length = 57
Score = 58.9 bits (141), Expect = 3e-07
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVEL-EGETDPLEIAMKELRERKIPFTIRR 404
T++E+ARI+G RALQISM APV++ L E DPL+IAM E + IP T++R
Sbjct: 4 TRFEKARIIGARALQISMGAPVLIHLPENIVDPLDIAMYEFEKGVIPITVKR 55
[217][TOP]
>UniRef100_Q2FTP3 DNA-directed RNA polymerase, subunit K n=1 Tax=Methanospirillum
hungatei JF-1 RepID=Q2FTP3_METHJ
Length = 55
Score = 58.2 bits (139), Expect = 5e-07
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
T+YE+ARI+G RALQISM AP+++ DPLEIAM+E IP T++R
Sbjct: 5 TRYEKARIVGARALQISMGAPILI-ATSSIDPLEIAMEEFDREVIPITVKR 54
[218][TOP]
>UniRef100_A2SSV2 DNA-directed RNA polymerase subunit K n=1 Tax=Methanocorpusculum
labreanum Z RepID=RPOK_METLZ
Length = 62
Score = 58.2 bits (139), Expect = 5e-07
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
T+YERARI+G RALQISM APV+V+ + DPL+IA++E ++P T++R
Sbjct: 4 TRYERARIVGARALQISMGAPVLVKTV-KIDPLDIALEEFDADRVPITVKR 53
[219][TOP]
>UniRef100_A5UN60 DNA-directed RNA polymerase, subunit K, RpoK n=2
Tax=Methanobrevibacter smithii RepID=A5UN60_METS3
Length = 65
Score = 57.8 bits (138), Expect = 6e-07
Identities = 26/57 (45%), Positives = 41/57 (71%)
Frame = +3
Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRY 407
T++ +T++ERAR+LG RA+QISM A +VE+ DP++IA +EL+ +P + RY
Sbjct: 7 TTENLTRFERARLLGARAIQISMGAKPLVEIGDSLDPIDIAYEELKAGVLPLDVIRY 63
[220][TOP]
>UniRef100_Q6L1M4 DNA-directed RNA polymerase subunit K n=1 Tax=Picrophilus torridus
RepID=RPOK_PICTO
Length = 60
Score = 57.8 bits (138), Expect = 6e-07
Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +3
Query: 249 MTKYERARILGTRALQISMNAPVMVELEGE-TDPLEIAMKELRERKIPFTIRR 404
+TK+E+ARI+G RALQI+M APV++++ + DP++IAM E IP TI+R
Sbjct: 6 LTKFEKARIIGARALQIAMGAPVIIDISPDIIDPIDIAMIEFENNVIPITIKR 58
[221][TOP]
>UniRef100_A0B6E6 DNA-directed RNA polymerase subunit K n=1 Tax=Methanosaeta
thermophila PT RepID=RPOK_METTP
Length = 60
Score = 57.4 bits (137), Expect = 8e-07
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
T++ERARI+G RALQI M APV++ + DPLEIA++E+R IP T++R
Sbjct: 7 TRFERARIVGARALQIFMGAPVLIRTD-SIDPLEIALEEMRLGVIPITVKR 56
[222][TOP]
>UniRef100_A7IAH0 RNA polymerase Rpb6 n=1 Tax=Candidatus Methanoregula boonei 6A8
RepID=A7IAH0_METB6
Length = 57
Score = 57.0 bits (136), Expect = 1e-06
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
T+YERARI+G RALQISM AP+++ DPLEIA++E IP T++R
Sbjct: 7 TRYERARIIGARALQISMGAPLLIS-TSRIDPLEIAIEEFNADIIPITVKR 56
[223][TOP]
>UniRef100_B7XL76 DNA-directed RNA polymerase, subunit K/omega n=1 Tax=Enterocytozoon
bieneusi H348 RepID=B7XL76_ENTBH
Length = 57
Score = 56.2 bits (134), Expect = 2e-06
Identities = 26/50 (52%), Positives = 38/50 (76%)
Frame = +3
Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTI 398
MT YE+A+I+G RA Q+S +AP +V++ TD +EIA KEL E+K+PF +
Sbjct: 1 MTIYEKAKIIGVRATQLSDDAPPLVDIGNLTDCIEIAKKELAEKKLPFIV 50
[224][TOP]
>UniRef100_A3MX22 DNA-directed RNA polymerase, omega subunit n=1 Tax=Pyrobaculum
calidifontis JCM 11548 RepID=A3MX22_PYRCJ
Length = 110
Score = 56.2 bits (134), Expect = 2e-06
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 MTKYERARILGTRALQISMNAPVMVELE--GETDPLEIAMKELRERKIPFTIRRYLPDG 419
+TKYE ARI+G RA Q++M A +V++ G DP+ IAM+ELR+ + F I R LPDG
Sbjct: 35 LTKYEIARIIGARATQLAMGAQPLVDVRQLGTIDPVLIAMEELRQGLLDFIIVRELPDG 93
[225][TOP]
>UniRef100_P0C9D6 DNA-directed RNA polymerase subunit 6 homolog n=1 Tax=African swine
fever virus Malawi LIL 20/1 RepID=RPB6_ASFM2
Length = 151
Score = 56.2 bits (134), Expect = 2e-06
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Frame = +3
Query: 60 MADDDYEDIDMG-----YEEEPPEPEIEEGAEEEDPDKQNDDLDAEP------IETEDKE 206
MAD+D ED+ M Y E E ++ E ED + D++ P ++ +
Sbjct: 1 MADNDNEDVIMDDLVEEYVETEEENFVDSEEESEDKSEDKDEIVESPSICEGFVQASSQT 60
Query: 207 ADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKI 386
+ R TS +T +E R++ RA Q+++N M++ + + P++IA +EL RKI
Sbjct: 61 LVIIPDNERITSNVLTTFEATRLVAVRAQQLAINGSTMLK-KKYSSPIDIAKQELFNRKI 119
Query: 387 PFTIRRYL---PDGS--YEDWGVDEL 449
P + R + P+G E W E+
Sbjct: 120 PLLVMRCIKVTPEGQKIVEIWNPREM 145
[226][TOP]
>UniRef100_UPI0001A48A41 DNA-DIRECTED RNA POLYMERASE RPO6 SUBUNIT n=1 Tax=Sulfolobus
shibatae RepID=UPI0001A48A41
Length = 95
Score = 55.8 bits (133), Expect = 2e-06
Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 MTKYERARILGTRALQISMNAPVMVELE--GETDPLEIAMKELRERKIPFTIRRYLPDG 419
+T+YE AR++ RALQ++M AP ++++ TD + IA +E R +P TIRR LP+G
Sbjct: 27 LTRYEIARVISARALQLAMGAPALIDINNLSSTDVISIAEEEFRRGVLPITIRRRLPNG 85
[227][TOP]
>UniRef100_Q97ZJ9 DNA-directed RNA polymerase subunit K n=2 Tax=Sulfolobus
solfataricus RepID=RPOK_SULSO
Length = 95
Score = 55.8 bits (133), Expect = 2e-06
Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 MTKYERARILGTRALQISMNAPVMVELE--GETDPLEIAMKELRERKIPFTIRRYLPDG 419
+T+YE AR++ RALQ++M AP ++++ TD + IA +E R +P TIRR LP+G
Sbjct: 27 LTRYEIARVISARALQLAMGAPALIDINNLSSTDVISIAEEEFRRGVLPITIRRRLPNG 85
[228][TOP]
>UniRef100_P42484 DNA-directed RNA polymerase subunit 6 homolog n=2 Tax=African swine
fever virus RepID=RPB6_ASFB7
Length = 147
Score = 55.8 bits (133), Expect = 2e-06
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Frame = +3
Query: 60 MADDDYEDIDM-GYEEEPPEPEIEEGAEEEDPDKQNDDLDAEP------IETEDKEADQP 218
MAD+D EDI M EE E E E + E+ + D++ P ++ +
Sbjct: 1 MADNDNEDIIMDDLVEEYVETEEENFVDSEEESEDKDEIVESPSICEGFVQASSQTLVII 60
Query: 219 VERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTI 398
+ R TS +T +E R++ RA Q+++N M++ + + P++IA +EL RKIP +
Sbjct: 61 PDNERITSNVLTTFEATRLVAVRAQQLAINGSTMLK-KKYSSPIDIAKQELFNRKIPLLV 119
Query: 399 RRYL---PDGS--YEDWGVDEL 449
R + P+G E W E+
Sbjct: 120 MRCIKVTPEGQKIVEIWNPREM 141
[229][TOP]
>UniRef100_B0R4Y7 DNA-directed RNA polymerase subunit K n=2 Tax=Halobacterium
salinarum RepID=RPOK_HALS3
Length = 60
Score = 55.5 bits (132), Expect = 3e-06
Identities = 25/55 (45%), Positives = 42/55 (76%)
Frame = +3
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404
S++ ++YE+ARI+G RALQ++ APV+V+ + +T+P+ IA +E +PFT+RR
Sbjct: 4 SQHFSRYEKARIIGARALQVAYGAPVLVDTD-QTEPILIAAEEYDADALPFTVRR 57
[230][TOP]
>UniRef100_Q08399 DNA-directed RNA polymerase subunit 6 homolog n=1 Tax=African swine
fever virus Malawi LIL 20/1 RepID=RPO6_ASFM2
Length = 139
Score = 55.5 bits (132), Expect = 3e-06
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Frame = +3
Query: 60 MADDDYEDIDMG-----YEEEPPEPEIEEGAEEEDPDKQNDDLDAEP------IETEDKE 206
MAD+D ED+ M Y E E ++ E ED + D++ P ++ +
Sbjct: 1 MADNDNEDVIMDDLVEEYVETEEENFVDSEEESEDKSEDKDEIVESPSICEGFVQASSQT 60
Query: 207 ADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKI 386
+ R TS +T +E R++ RA Q+++N M++ + + P++IA +EL RKI
Sbjct: 61 LVIIPDNERITSNVLTTFEATRLVAVRAQQLAINGSTMLK-KKYSSPIDIAKQELFNRKI 119
Query: 387 PFTIRRYL---PDG 419
P + R + P+G
Sbjct: 120 PLLVMRCIKVTPEG 133
[231][TOP]
>UniRef100_UPI0000F51709 DNA-directed RNA polymerase subunit K n=1 Tax=Ferroplasma
acidarmanus fer1 RepID=UPI0000F51709
Length = 56
Score = 54.7 bits (130), Expect = 5e-06
Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +3
Query: 249 MTKYERARILGTRALQISMNAPVMVELEGE-TDPLEIAMKELRERKIPFTIRR 404
+TK+E+ARI+G RALQI+M APV++++ + DP++IA+ E IP TIRR
Sbjct: 3 LTKFEKARIIGARALQIAMGAPVILDVSPDMIDPIDIAIFEFDNGVIPITIRR 55
[232][TOP]
>UniRef100_B8YB61 RNA polymerase subunit 6 n=1 Tax=Sulfolobus shibatae B12
RepID=B8YB61_SULSH
Length = 95
Score = 54.7 bits (130), Expect = 5e-06
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 MTKYERARILGTRALQISMNAPVMVELE--GETDPLEIAMKELRERKIPFTIRRYLPDG 419
+T+YE AR++ RALQ++M AP ++++ TD + IA +E + +P TIRR LP+G
Sbjct: 27 LTRYEIARVISARALQLAMGAPALIDINNISSTDVISIAEEEFKRGVLPITIRRRLPNG 85
[233][TOP]
>UniRef100_Q9HJ14 DNA-directed RNA polymerase subunit K n=1 Tax=Thermoplasma
acidophilum RepID=RPOK_THEAC
Length = 61
Score = 54.7 bits (130), Expect = 5e-06
Identities = 26/52 (50%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVEL-EGETDPLEIAMKELRERKIPFTIRR 404
TK+E+ARI+G RALQI+M APV++++ + DP++IAM E IP TI++
Sbjct: 4 TKFEKARIIGARALQIAMGAPVIIDVPKNIIDPVDIAMLEFENNVIPITIKK 55
[234][TOP]
>UniRef100_Q2P9V9 RNA polymerase I subunit 1RPB6 n=2 Tax=Trypanosoma brucei
RepID=Q2P9V9_TRYBB
Length = 131
Score = 54.3 bits (129), Expect = 7e-06
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 20/98 (20%)
Frame = +3
Query: 225 RPRRTSKYMTKYERARILGTRALQISMNAPVMVELE--------------------GETD 344
+ R++S Y+TKYE ARI+G RA QI V++E + D
Sbjct: 26 KDRKSSVYLTKYEVARIIGERARQIVNGTSVLLESQNGCGTGNSLELAEGCADPFAASVD 85
Query: 345 PLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458
P+ I EL + +IP +RR PDG E+ V+EL V+
Sbjct: 86 PIHITKLELLQGRIPMIVRRTWPDGRTENIPVNELKVD 123
[235][TOP]
>UniRef100_A1RRU8 DNA-directed RNA polymerase, subunit K n=1 Tax=Pyrobaculum
islandicum DSM 4184 RepID=A1RRU8_PYRIL
Length = 109
Score = 54.3 bits (129), Expect = 7e-06
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = +3
Query: 249 MTKYERARILGTRALQISMNAPVMVELE--GETDPLEIAMKELRERKIPFTIRRYLPDG 419
+TKYE ARI+G RALQ++M A +++ G TDP+ IA++E R + F I R PDG
Sbjct: 34 LTKYEIARIIGARALQLAMGAQPKIDIRELGTTDPVLIALEEFRRGLLDFIIVREFPDG 92
[236][TOP]
>UniRef100_Q2NG01 RpoK n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NG01_METST
Length = 63
Score = 53.9 bits (128), Expect = 9e-06
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIP 389
S+ T++ERAR++G+RALQISM A +VE + DP++IA+KE E IP
Sbjct: 3 SRNNTRFERARLIGSRALQISMGANPLVEFTPDQDPIKIAIKEYEEGVIP 52
[237][TOP]
>UniRef100_Q12TI3 DNA-directed RNA polymerase subunit K n=1 Tax=Methanococcoides
burtonii DSM 6242 RepID=Q12TI3_METBU
Length = 63
Score = 53.9 bits (128), Expect = 9e-06
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410
T+YERARI+G R+LQI+M AP+++E + TD L +A E + IP T++R L
Sbjct: 11 TRYERARIIGARSLQIAMGAPILIE-DDNTDALYLATLEFEKGVIPITVKRNL 62
[238][TOP]
>UniRef100_P58232 DNA-directed RNA polymerase subunit K n=1 Tax=Thermoplasma
volcanium RepID=RPOK_THEVO
Length = 61
Score = 53.9 bits (128), Expect = 9e-06
Identities = 26/52 (50%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 252 TKYERARILGTRALQISMNAPVMVEL-EGETDPLEIAMKELRERKIPFTIRR 404
TK+E+ARI+G RALQI+M APV++++ + DP++IA E IP TI+R
Sbjct: 4 TKFEKARIIGARALQIAMGAPVIIDIPKNVIDPVDIATIEFENNVIPITIKR 55