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[1][TOP] >UniRef100_A2Q3E0 DNA-directed RNA polymerase, 14 to 18 kDa subunit n=1 Tax=Medicago truncatula RepID=A2Q3E0_MEDTR Length = 145 Score = 277 bits (709), Expect = 4e-73 Identities = 137/145 (94%), Positives = 139/145 (95%), Gaps = 2/145 (1%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAE--PIETEDKEADQPVERPR 233 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPD +NDDLDAE PIETE+KE PVERPR Sbjct: 1 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDNKNDDLDAEGEPIETEEKEDAAPVERPR 60 Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP Sbjct: 61 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 120 Query: 414 DGSYEDWGVDELIVEDSWKRQVGGD 488 DGSYEDWGVDELIVEDSWKRQVGGD Sbjct: 121 DGSYEDWGVDELIVEDSWKRQVGGD 145 [2][TOP] >UniRef100_B7FHE6 Putative uncharacterized protein n=1 Tax=Medicago truncatula RepID=B7FHE6_MEDTR Length = 145 Score = 275 bits (704), Expect = 1e-72 Identities = 136/145 (93%), Positives = 138/145 (95%), Gaps = 2/145 (1%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAE--PIETEDKEADQPVERPR 233 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPD +NDDLDAE PIETE+KE PVERPR Sbjct: 1 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDNKNDDLDAEGEPIETEEKEDVAPVERPR 60 Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413 RTSKYMTKYERARI GTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP Sbjct: 61 RTSKYMTKYERARIFGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 120 Query: 414 DGSYEDWGVDELIVEDSWKRQVGGD 488 DGSYEDWGVDELIVEDSWKRQVGGD Sbjct: 121 DGSYEDWGVDELIVEDSWKRQVGGD 145 [3][TOP] >UniRef100_C6SWG7 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6SWG7_SOYBN Length = 142 Score = 260 bits (665), Expect = 5e-68 Identities = 126/143 (88%), Positives = 136/143 (95%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 MAD+DYEDIDMGYE+EPPEPEIEEGAEE D + +ND++ E I+TEDKE +QPV+RPR+T Sbjct: 1 MADEDYEDIDMGYEDEPPEPEIEEGAEE-DVENKNDEITGESIDTEDKEEEQPVKRPRKT 59 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG Sbjct: 60 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 119 Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488 SYEDWGVDELIVEDSWKRQVGGD Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142 [4][TOP] >UniRef100_B9I4C9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I4C9_POPTR Length = 143 Score = 258 bits (659), Expect = 2e-67 Identities = 123/143 (86%), Positives = 132/143 (92%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 MAD+DY D+DMGYE+EPPEPEIEEG EE+ + N+D EPIETEDKE +PVERPR+T Sbjct: 1 MADEDYNDVDMGYEDEPPEPEIEEGVEEDADNDNNEDDKGEPIETEDKEEQEPVERPRKT 60 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 SK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG Sbjct: 61 SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 120 Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488 SYEDWGVDELIVEDSWKRQVGGD Sbjct: 121 SYEDWGVDELIVEDSWKRQVGGD 143 [5][TOP] >UniRef100_B9ID35 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ID35_POPTR Length = 143 Score = 254 bits (650), Expect = 3e-66 Identities = 122/143 (85%), Positives = 131/143 (91%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 MADD+Y D+DMGYE+EP EPEIEEGA+E+ + N+D EPIETEDKE PVERPR+T Sbjct: 1 MADDEYNDVDMGYEDEPAEPEIEEGADEDAENNNNEDDTGEPIETEDKEEQAPVERPRKT 60 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 SK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG Sbjct: 61 SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 120 Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488 SYEDWGVDELIVEDSWKRQVGGD Sbjct: 121 SYEDWGVDELIVEDSWKRQVGGD 143 [6][TOP] >UniRef100_A7QVJ8 Chromosome chr16 scaffold_189, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7QVJ8_VITVI Length = 142 Score = 245 bits (626), Expect = 2e-63 Identities = 118/143 (82%), Positives = 131/143 (91%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 MAD++Y D+DMGYE+EPPEPEIEEGAEEE + N+D+ + +E ++KE + VERPR+T Sbjct: 1 MADEEYNDVDMGYEDEPPEPEIEEGAEEEAENNNNEDVP-DALEEQEKEVHETVERPRKT 59 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG Sbjct: 60 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 119 Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488 SYEDWGVDELIVEDSWKRQVGGD Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142 [7][TOP] >UniRef100_Q9FJ98 DNA-directed RNA polymerase II subunit-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9FJ98_ARATH Length = 144 Score = 244 bits (623), Expect = 3e-63 Identities = 117/144 (81%), Positives = 132/144 (91%), Gaps = 1/144 (0%) Frame = +3 Query: 60 MADDDYEDID-MGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR 236 MAD+DY D+D +GYE+EP EPEIEEG EE+ K+NDD++ EPIE EDK +PV+RPR+ Sbjct: 1 MADEDYNDVDDLGYEDEPAEPEIEEGVEEDVEMKENDDVNGEPIEAEDKVETEPVQRPRK 60 Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416 TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPD Sbjct: 61 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPD 120 Query: 417 GSYEDWGVDELIVEDSWKRQVGGD 488 GS+E+WGVDELIVEDSWKRQVGGD Sbjct: 121 GSFEEWGVDELIVEDSWKRQVGGD 144 [8][TOP] >UniRef100_A7PJQ3 Chromosome chr12 scaffold_18, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7PJQ3_VITVI Length = 141 Score = 243 bits (620), Expect = 8e-63 Identities = 121/143 (84%), Positives = 130/143 (90%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 MADDDY D+DMGYE+EPPEPEIEEGAEE+ + N+D+ + IET +KE PVER R+T Sbjct: 1 MADDDYNDMDMGYEDEPPEPEIEEGAEEDADNNNNEDIP-DAIETAEKE-QVPVERSRKT 58 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG Sbjct: 59 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 118 Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488 SYEDWGVDELIVEDSWKRQVGGD Sbjct: 119 SYEDWGVDELIVEDSWKRQVGGD 141 [9][TOP] >UniRef100_Q9SJ96 Putative DNA-directed RNA polymerase II subunit n=1 Tax=Arabidopsis thaliana RepID=Q9SJ96_ARATH Length = 144 Score = 243 bits (619), Expect = 1e-62 Identities = 116/144 (80%), Positives = 132/144 (91%), Gaps = 1/144 (0%) Frame = +3 Query: 60 MADDDYEDID-MGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR 236 MADDDY ++D +GYE+EP EPEIEEG EE+ K+NDD++ +P+ETEDK +PV+RPR+ Sbjct: 1 MADDDYNEVDDLGYEDEPAEPEIEEGVEEDADIKENDDVNVDPLETEDKVETEPVQRPRK 60 Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416 TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPD Sbjct: 61 TSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPD 120 Query: 417 GSYEDWGVDELIVEDSWKRQVGGD 488 SYE+WGVDELIVEDSWKRQVGGD Sbjct: 121 MSYEEWGVDELIVEDSWKRQVGGD 144 [10][TOP] >UniRef100_A2XIZ2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2XIZ2_ORYSI Length = 143 Score = 237 bits (605), Expect = 4e-61 Identities = 120/144 (83%), Positives = 129/144 (89%), Gaps = 2/144 (1%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPI--ETEDKEADQPVERPR 233 MADDDY D+DMGYE+EPPEPEIEEGAEEE P+ N+D E + E EDKE ++ +RPR Sbjct: 1 MADDDYNDMDMGYEDEPPEPEIEEGAEEE-PENNNEDGPDEVVGAEAEDKEQEK-TQRPR 58 Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413 +TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLP Sbjct: 59 KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 118 Query: 414 DGSYEDWGVDELIVEDSWKRQVGG 485 DGSYEDWGVDELIVEDSWKRQVGG Sbjct: 119 DGSYEDWGVDELIVEDSWKRQVGG 142 [11][TOP] >UniRef100_Q8LI69 Os07g0463100 protein n=2 Tax=Oryza sativa RepID=Q8LI69_ORYSJ Length = 142 Score = 236 bits (602), Expect = 9e-61 Identities = 115/142 (80%), Positives = 125/142 (88%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 MA+DDY D+DMGYE+EPPEPEIEEGAEEE P+ N+D + + ED + + RPR+T Sbjct: 1 MAEDDYNDMDMGYEDEPPEPEIEEGAEEE-PENNNEDAVDDVVGAEDDKEQEKTARPRKT 59 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG Sbjct: 60 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119 Query: 420 SYEDWGVDELIVEDSWKRQVGG 485 SYEDWGVDELIVEDSWKRQVGG Sbjct: 120 SYEDWGVDELIVEDSWKRQVGG 141 [12][TOP] >UniRef100_Q6F2V1 Os03g0586600 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6F2V1_ORYSJ Length = 142 Score = 236 bits (601), Expect = 1e-60 Identities = 116/142 (81%), Positives = 126/142 (88%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 MADDDY D+DMGYE+EPPEPEIEEGAEEE + ++ + E EDKE ++ +RPR+T Sbjct: 1 MADDDYNDMDMGYEDEPPEPEIEEGAEEEPENNEDGPDEVVGAEAEDKEQEK-TQRPRKT 59 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG Sbjct: 60 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119 Query: 420 SYEDWGVDELIVEDSWKRQVGG 485 SYEDWGVDELIVEDSWKRQVGG Sbjct: 120 SYEDWGVDELIVEDSWKRQVGG 141 [13][TOP] >UniRef100_B6SI57 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide n=1 Tax=Zea mays RepID=B6SI57_MAIZE Length = 142 Score = 232 bits (591), Expect = 2e-59 Identities = 116/143 (81%), Positives = 126/143 (88%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 MADDDY +IDMGYE+EPPEPEIEEGAEEE + ++ D E EDKE ++ +R R+T Sbjct: 1 MADDDYNEIDMGYEDEPPEPEIEEGAEEEPENNEDAPDDVIGGEGEDKEQEK-TKRERKT 59 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 +KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG Sbjct: 60 TKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119 Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488 SYEDWGVDELIVEDSWKRQVGGD Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142 [14][TOP] >UniRef100_B4FLZ6 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B4FLZ6_MAIZE Length = 142 Score = 231 bits (588), Expect = 4e-59 Identities = 116/143 (81%), Positives = 126/143 (88%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 MADDDY +IDMGYE+EPPEPEIEEGAEEE + ++ D E EDKE ++ +R R+T Sbjct: 1 MADDDYNEIDMGYEDEPPEPEIEEGAEEELENNEDAPDDVIGGEGEDKEQEK-TKRERKT 59 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 +KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG Sbjct: 60 TKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119 Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488 SYEDWGVDELIVEDSWKRQVGGD Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142 [15][TOP] >UniRef100_B6T8K1 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide n=1 Tax=Zea mays RepID=B6T8K1_MAIZE Length = 142 Score = 229 bits (584), Expect = 1e-58 Identities = 115/143 (80%), Positives = 125/143 (87%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 MA DDY +IDMGYE+EPPEPEIEEGAEEE + ++ D E EDKE ++ +R R+T Sbjct: 1 MAXDDYNEIDMGYEDEPPEPEIEEGAEEEPENNEDAPDDVIGGEGEDKEQEK-TKRERKT 59 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 +KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG Sbjct: 60 TKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119 Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488 SYEDWGVDELIVEDSWKRQVGGD Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142 [16][TOP] >UniRef100_B6TJG4 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide n=1 Tax=Zea mays RepID=B6TJG4_MAIZE Length = 142 Score = 227 bits (578), Expect = 6e-58 Identities = 115/143 (80%), Positives = 125/143 (87%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 MADDDY +IDMGYE+E PEPEIEEGAEEE + ++ D E EDKE ++ +R R+T Sbjct: 1 MADDDYNEIDMGYEDELPEPEIEEGAEEELENNEDAPDDVIGGEGEDKEQEK-TKRERKT 59 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 +KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLPDG Sbjct: 60 TKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLPDG 119 Query: 420 SYEDWGVDELIVEDSWKRQVGGD 488 SYEDWGVDELIVEDSWKRQVGGD Sbjct: 120 SYEDWGVDELIVEDSWKRQVGGD 142 [17][TOP] >UniRef100_Q9S7Q6 DNA-directed RNA polymerase IIa n=1 Tax=Nicotiana tabacum RepID=Q9S7Q6_TOBAC Length = 143 Score = 225 bits (573), Expect = 2e-57 Identities = 115/144 (79%), Positives = 127/144 (88%), Gaps = 2/144 (1%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPI--ETEDKEADQPVERPR 233 MADDDY D+D GY +EP EPE +EGAE E+ + N+D+ +P+ E E+K +PVERPR Sbjct: 1 MADDDY-DMDGGYVDEPIEPEPDEGAEIEEDNGNNEDIP-DPLLGEGEEKTEQEPVERPR 58 Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413 +TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP Sbjct: 59 KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 118 Query: 414 DGSYEDWGVDELIVEDSWKRQVGG 485 DGSYEDWGVDELIVEDSWKRQVGG Sbjct: 119 DGSYEDWGVDELIVEDSWKRQVGG 142 [18][TOP] >UniRef100_C5X5S2 Putative uncharacterized protein Sb02g011150 n=1 Tax=Sorghum bicolor RepID=C5X5S2_SORBI Length = 143 Score = 223 bits (569), Expect = 6e-57 Identities = 114/145 (78%), Positives = 125/145 (86%), Gaps = 2/145 (1%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDL--DAEPIETEDKEADQPVERPR 233 MADDDY ++DMGYE+EPPE EIEEGAEEE + N+D D E EDKE ++ + R R Sbjct: 1 MADDDYNEMDMGYEDEPPEAEIEEGAEEE-LENNNEDTPDDVVGAEAEDKEQEK-IARAR 58 Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413 +T+KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFTIRRYLP Sbjct: 59 KTTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 118 Query: 414 DGSYEDWGVDELIVEDSWKRQVGGD 488 DGSYEDW VDELIVEDSWKRQVGG+ Sbjct: 119 DGSYEDWSVDELIVEDSWKRQVGGE 143 [19][TOP] >UniRef100_A3BJH6 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=A3BJH6_ORYSJ Length = 177 Score = 218 bits (556), Expect = 2e-55 Identities = 115/177 (64%), Positives = 125/177 (70%), Gaps = 35/177 (19%) Frame = +3 Query: 60 MADDDYEDIDMG-----------------------------------YEEEPPEPEIEEG 134 MA+DDY D+DMG YE+EPPEPEIEEG Sbjct: 1 MAEDDYNDMDMGFASPPPSLARFRRYSFAPSLGFTGTRMSPQNLRLRYEDEPPEPEIEEG 60 Query: 135 AEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAP 314 AEEE P+ N+D + + ED + + RPR+TSKYMTKYERARILGTRALQISMNAP Sbjct: 61 AEEE-PENNNEDAVDDVVGAEDDKEQEKTARPRKTSKYMTKYERARILGTRALQISMNAP 119 Query: 315 VMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 485 VMVELEGETDPLEIAMKELR RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG Sbjct: 120 VMVELEGETDPLEIAMKELRARKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 176 [20][TOP] >UniRef100_A9NU56 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=A9NU56_PICSI Length = 147 Score = 217 bits (553), Expect = 4e-55 Identities = 114/152 (75%), Positives = 125/152 (82%), Gaps = 9/152 (5%) Frame = +3 Query: 60 MADDDYEDID---MGYEEEPPEPEIEEGA---EEEDPDKQNDDL---DAEPIETEDKEAD 212 MAD+DY D D +GYEEEPPEPEIEE EEE + D L D EP+E + Sbjct: 1 MADEDYNDFDGGDVGYEEEPPEPEIEEEVAPEEEEHEEVPVDTLGGGDKEPVEQQ----- 55 Query: 213 QPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 392 +P ++PR+TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF Sbjct: 56 RPSDKPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 115 Query: 393 TIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 488 TIRRYLPDGSYEDWGVDELIVEDSW+RQVGGD Sbjct: 116 TIRRYLPDGSYEDWGVDELIVEDSWRRQVGGD 147 [21][TOP] >UniRef100_C0PQI2 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=C0PQI2_PICSI Length = 147 Score = 216 bits (550), Expect = 1e-54 Identities = 114/152 (75%), Positives = 124/152 (81%), Gaps = 9/152 (5%) Frame = +3 Query: 60 MADDDYEDID---MGYEEEPPEPEIEEGA---EEEDPDKQNDDL---DAEPIETEDKEAD 212 MAD+DY D D +GYEEEPPEPEIEE EEE + D L D EP+E + Sbjct: 1 MADEDYNDFDGGDVGYEEEPPEPEIEEEVAPEEEEHEEVPVDTLGGGDKEPVEQQ----- 55 Query: 213 QPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 392 +P ++PR+TSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF Sbjct: 56 RPSDKPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 115 Query: 393 TIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 488 TIRRYLPDGSYEDWGVDELIVEDSW RQVGGD Sbjct: 116 TIRRYLPDGSYEDWGVDELIVEDSWTRQVGGD 147 [22][TOP] >UniRef100_B9R9F9 DNA-directed RNA polymerase subunit rpb6, putative n=1 Tax=Ricinus communis RepID=B9R9F9_RICCO Length = 124 Score = 214 bits (544), Expect = 5e-54 Identities = 103/121 (85%), Positives = 111/121 (91%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISM 305 +EGAEE+ + N+D+ +PIETEDKE + ERPR+TSKYMTKYERARILGTRALQISM Sbjct: 4 QEGAEEDVENNNNEDVPGDPIETEDKEEQEAAERPRKTSKYMTKYERARILGTRALQISM 63 Query: 306 NAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 485 NAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG Sbjct: 64 NAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 123 Query: 486 D 488 D Sbjct: 124 D 124 [23][TOP] >UniRef100_A5AKW7 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5AKW7_VITVI Length = 140 Score = 199 bits (505), Expect = 2e-49 Identities = 101/121 (83%), Positives = 109/121 (90%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISM 305 +EGAEE+ + N+D+ + IET +KE PVER R+TSKYMTKYERARILGTRALQISM Sbjct: 22 DEGAEEDADNNNNEDIP-DAIETAEKE-QVPVERSRKTSKYMTKYERARILGTRALQISM 79 Query: 306 NAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 485 NAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG Sbjct: 80 NAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 139 Query: 486 D 488 D Sbjct: 140 D 140 [24][TOP] >UniRef100_A9TB02 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TB02_PHYPA Length = 119 Score = 179 bits (455), Expect = 1e-43 Identities = 89/121 (73%), Positives = 101/121 (83%) Frame = +3 Query: 120 EIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQI 299 E+ EG EE D + D L+ + + A+ ++PR+T+KYMTKYERAR+LGTRALQI Sbjct: 2 EVAEGDEENDDARDFDGLETDTLVDG---AEVRTDKPRKTTKYMTKYERARVLGTRALQI 58 Query: 300 SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 479 SMNAPVMV LEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSW+RQV Sbjct: 59 SMNAPVMVNLEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWRRQV 118 Query: 480 G 482 G Sbjct: 119 G 119 [25][TOP] >UniRef100_B7PRL4 RNA polymerase subunit K, putative n=1 Tax=Ixodes scapularis RepID=B7PRL4_IXOSC Length = 129 Score = 155 bits (393), Expect = 2e-36 Identities = 81/134 (60%), Positives = 101/134 (75%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 MADD+YE D+G ++ + + +E +E D QNDD + E ++ D + Q + R T Sbjct: 1 MADDEYEADDVGGGDDFDDVDEDENLDEID---QNDDENIELLQASDGQPQQ--NQKRIT 55 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 + YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDG Sbjct: 56 TMYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKARKIPIIIRRYLPDG 115 Query: 420 SYEDWGVDELIVED 461 SYEDWG+DELI+ D Sbjct: 116 SYEDWGIDELIITD 129 [26][TOP] >UniRef100_C4WSH1 ACYPI005782 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSH1_ACYPI Length = 132 Score = 151 bits (381), Expect = 4e-35 Identities = 77/135 (57%), Positives = 102/135 (75%), Gaps = 1/135 (0%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR- 236 MAD++++ D G ++ + + E + P++ D++D PI+ EA V++ +R Sbjct: 1 MADEEFDHDDGGADDFDEVEDDADLDELDQPEENEDNIDILPIQ----EAQSQVQKSKRI 56 Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416 T+KYMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL++RKIP IRRYLPD Sbjct: 57 TTKYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKKRKIPIIIRRYLPD 116 Query: 417 GSYEDWGVDELIVED 461 SYEDWG+DELI+ D Sbjct: 117 NSYEDWGIDELIIVD 131 [27][TOP] >UniRef100_UPI000186D3E6 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186D3E6 Length = 132 Score = 149 bits (377), Expect = 1e-34 Identities = 79/135 (58%), Positives = 99/135 (73%), Gaps = 1/135 (0%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR- 236 M+DD Y+ D+G + + + ++ ED D+ DD DA + EA V + +R Sbjct: 1 MSDDKYDTDDVGEDFD----DADDDDNAEDLDQPEDDADALDPGSISIEAKGSVAKSKRI 56 Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416 T+KYMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL++RKIP IRRYLPD Sbjct: 57 TTKYMTKYERARVLGTRALQIAMGAPVMVELEGETDPLQIAMKELKQRKIPIIIRRYLPD 116 Query: 417 GSYEDWGVDELIVED 461 SYEDWG+DELI+ D Sbjct: 117 HSYEDWGIDELIIID 131 [28][TOP] >UniRef100_C1EBJ1 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EBJ1_9CHLO Length = 138 Score = 147 bits (370), Expect = 7e-34 Identities = 76/139 (54%), Positives = 99/139 (71%), Gaps = 2/139 (1%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQP--VERPRRT 239 D DY+ D Y+ + P +++P+ ++ ++ +E + Q R T Sbjct: 4 DGDYDGGDGAYDYDEP------AGGDDEPEAEDAEMPEGGVEVLEHAPQQGGGAVTERTT 57 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 + YMTKYERARILGTRALQISMNAPV+V+L+GETDPLEIA KELRE++IPFT+RRYLPDG Sbjct: 58 TPYMTKYERARILGTRALQISMNAPVLVQLDGETDPLEIAGKELREKRIPFTVRRYLPDG 117 Query: 420 SYEDWGVDELIVEDSWKRQ 476 S+EDWGVDELIVED +R+ Sbjct: 118 SWEDWGVDELIVEDPDRRR 136 [29][TOP] >UniRef100_UPI00015B553F PREDICTED: similar to DNA-directed RNA polymerase subunit rpb6 n=1 Tax=Nasonia vitripennis RepID=UPI00015B553F Length = 130 Score = 144 bits (363), Expect = 5e-33 Identities = 79/135 (58%), Positives = 99/135 (73%), Gaps = 1/135 (0%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR- 236 MADD++E D+ E + E + E+++ D +N +L A EA V++ +R Sbjct: 1 MADDEFEADDVADEFDDVEDDDNIELEQQEDDGENFELVAAG------EASGGVQKSKRI 54 Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416 T+ YMTKYERARILGTRALQISM APVMVELEGETDPL+IAMKEL++RKIP IRR+LPD Sbjct: 55 TTGYMTKYERARILGTRALQISMCAPVMVELEGETDPLQIAMKELKQRKIPIIIRRFLPD 114 Query: 417 GSYEDWGVDELIVED 461 SYEDWG+DELI+ D Sbjct: 115 HSYEDWGIDELIIID 129 [30][TOP] >UniRef100_UPI000051A425 PREDICTED: similar to RNA polymerase II 18kD subunit CG1163-PA n=1 Tax=Apis mellifera RepID=UPI000051A425 Length = 130 Score = 143 bits (360), Expect = 1e-32 Identities = 78/143 (54%), Positives = 100/143 (69%), Gaps = 9/143 (6%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDK--------EADQ 215 MADDD++ +E A++ D +D+++ EP E + + EA Sbjct: 1 MADDDFDG--------------DEVADDFDDVDDDDNIELEPQEEDGENIELLAAGEATG 46 Query: 216 PVERPRR-TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 392 V+R +R T++YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL++RKIP Sbjct: 47 GVQRSKRITTRYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKQRKIPI 106 Query: 393 TIRRYLPDGSYEDWGVDELIVED 461 IRRYLPD SYEDWG+DELI+ D Sbjct: 107 IIRRYLPDNSYEDWGIDELIIID 129 [31][TOP] >UniRef100_Q7Q6F5 AGAP005873-PA n=1 Tax=Anopheles gambiae RepID=Q7Q6F5_ANOGA Length = 131 Score = 143 bits (360), Expect = 1e-32 Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 2/136 (1%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDK-EADQPVERPRR 236 M D DY++ D+G +E ++ E+++ D+ N + D + IE + +A V + +R Sbjct: 1 MDDGDYDNDDVGGDE------FDDVEEDDNIDELNQEEDGDNIEIINPGQAGGGVPKNKR 54 Query: 237 -TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413 T+KYMTKYERAR+LGTRALQI+M AP+MVELEGETDPL+IAMKEL++RKIP IRRYLP Sbjct: 55 ITTKYMTKYERARVLGTRALQIAMCAPIMVELEGETDPLQIAMKELKQRKIPIIIRRYLP 114 Query: 414 DGSYEDWGVDELIVED 461 D SYEDW +DELI+ D Sbjct: 115 DSSYEDWSIDELIIID 130 [32][TOP] >UniRef100_UPI0000D563C0 PREDICTED: similar to AGAP005873-PA n=1 Tax=Tribolium castaneum RepID=UPI0000D563C0 Length = 131 Score = 142 bits (357), Expect = 2e-32 Identities = 74/136 (54%), Positives = 100/136 (73%), Gaps = 2/136 (1%) Frame = +3 Query: 60 MADDDYEDIDMG--YEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPR 233 M D++++ D+G ++++ + IEE E P+++ D++D I + + R Sbjct: 1 MNDEEFDGDDVGDDFDDDVDDDNIEE---LEQPEEEGDNID---ILAHGQAGGGVPKNKR 54 Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413 T+KYMTKYERAR+LGTRALQI+M APVMVEL+GETDPL+IAMKEL++RKIP IRRYLP Sbjct: 55 ITTKYMTKYERARVLGTRALQIAMCAPVMVELDGETDPLQIAMKELKQRKIPIIIRRYLP 114 Query: 414 DGSYEDWGVDELIVED 461 D SYEDWG+DELI+ D Sbjct: 115 DHSYEDWGIDELIIID 130 [33][TOP] >UniRef100_Q17F62 DNA-directed RNA polymerase subunit rpb6 n=1 Tax=Aedes aegypti RepID=Q17F62_AEDAE Length = 131 Score = 142 bits (357), Expect = 2e-32 Identities = 74/136 (54%), Positives = 98/136 (72%), Gaps = 2/136 (1%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIE--TEDKEADQPVERPR 233 M D DY++ D+G +E ++ E+++ D+ N + D + IE T + + R Sbjct: 1 MDDGDYDNDDVGGDE------FDDVEEDDNIDELNQEEDGDNIELITPGQAGGGVPKSKR 54 Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413 T+KYMTKYERAR+LGTRALQI+M AP+MVELEGETDPL+IAMKEL++RKIP IRR+LP Sbjct: 55 ITTKYMTKYERARVLGTRALQIAMCAPIMVELEGETDPLQIAMKELKQRKIPIIIRRFLP 114 Query: 414 DGSYEDWGVDELIVED 461 D SYEDW +DELI+ D Sbjct: 115 DSSYEDWSIDELIIID 130 [34][TOP] >UniRef100_B0XGQ1 DNA-directed RNA polymeraseI n=1 Tax=Culex quinquefasciatus RepID=B0XGQ1_CULQU Length = 131 Score = 142 bits (357), Expect = 2e-32 Identities = 74/136 (54%), Positives = 98/136 (72%), Gaps = 2/136 (1%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIE--TEDKEADQPVERPR 233 M D D+++ D+G +E ++ E+++ D+ N + D + IE T + + R Sbjct: 1 MDDGDFDNDDVGGDE------FDDVEEDDNIDEINQEEDGDNIELITPGQSGGGVPKSKR 54 Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413 T+KYMTKYERAR+LGTRALQI+M AP+MVELEGETDPL+IAMKEL++RKIP IRRYLP Sbjct: 55 ITTKYMTKYERARVLGTRALQIAMCAPIMVELEGETDPLQIAMKELKQRKIPIIIRRYLP 114 Query: 414 DGSYEDWGVDELIVED 461 D SYEDW +DELI+ D Sbjct: 115 DASYEDWSIDELIIID 130 [35][TOP] >UniRef100_UPI0000588F6C PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000588F6C Length = 124 Score = 140 bits (354), Expect = 5e-32 Identities = 78/136 (57%), Positives = 97/136 (71%), Gaps = 1/136 (0%) Frame = +3 Query: 54 LTMADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPR 233 + + D+D++D D EP ++E EEE D D +D P A + V++ Sbjct: 7 IVLFDEDFDDGD--------EP-LDEANEEEADD--GDHIDVLP-------AGEGVQQTE 48 Query: 234 R-TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410 R T+ YMTKYERAR+LGTRALQI+MNAPVMVELEGETDPL+IAMKEL+ RKIP IRRYL Sbjct: 49 RITTPYMTKYERARVLGTRALQIAMNAPVMVELEGETDPLQIAMKELKARKIPIIIRRYL 108 Query: 411 PDGSYEDWGVDELIVE 458 PDGSYEDWG DEL+++ Sbjct: 109 PDGSYEDWGCDELVID 124 [36][TOP] >UniRef100_Q6DGS5 Zgc:92790 n=1 Tax=Danio rerio RepID=Q6DGS5_DANRE Length = 127 Score = 140 bits (354), Expect = 5e-32 Identities = 75/132 (56%), Positives = 93/132 (70%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSK 245 D D++D+ E+E P ++E ED D++N ++ Q + R T++ Sbjct: 10 DGDFDDV----EDEEPLDDLEN---VEDEDQEN-------VQILPAGEGQQANQKRITTQ 55 Query: 246 YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSY 425 YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGSY Sbjct: 56 YMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYLPDGSY 115 Query: 426 EDWGVDELIVED 461 EDWG DELI+ D Sbjct: 116 EDWGCDELIITD 127 [37][TOP] >UniRef100_Q4SCJ6 Chromosome undetermined SCAF14653, whole genome shotgun sequence n=1 Tax=Tetraodon nigroviridis RepID=Q4SCJ6_TETNG Length = 127 Score = 140 bits (354), Expect = 5e-32 Identities = 75/129 (58%), Positives = 90/129 (69%), Gaps = 8/129 (6%) Frame = +3 Query: 99 EEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKE--------ADQPVERPRRTSKYMT 254 E+ + + ++G E+E D D E +E ED+E Q + R T+ YMT Sbjct: 5 EDNFDDGDFDDGEEDEGLD------DLENVEDEDQENVQILPAGEGQQANQKRITTPYMT 58 Query: 255 KYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW 434 KYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGSYEDW Sbjct: 59 KYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYLPDGSYEDW 118 Query: 435 GVDELIVED 461 G DELI+ D Sbjct: 119 GCDELIITD 127 [38][TOP] >UniRef100_C3YH75 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YH75_BRAFL Length = 129 Score = 140 bits (354), Expect = 5e-32 Identities = 74/131 (56%), Positives = 95/131 (72%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKY 248 DD++D D +++ + + EE +E D +Q D + + + D E P + + T+ Y Sbjct: 3 DDFDDGDQ-FDDVGDDLDDEEPLDELDNVEQEGDENIDVLPAGDGE---PQQLQKITTPY 58 Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428 MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGS+E Sbjct: 59 MTKYERARVLGTRALQIAMGAPVMVELEGETDPLHIAMKELKVRKIPIIIRRYLPDGSFE 118 Query: 429 DWGVDELIVED 461 DWG+DELI+ D Sbjct: 119 DWGIDELIILD 129 [39][TOP] >UniRef100_B8RJ41 DNA-directed RNA polymerase I n=1 Tax=Culex tarsalis RepID=B8RJ41_CULTA Length = 131 Score = 140 bits (353), Expect = 7e-32 Identities = 73/136 (53%), Positives = 98/136 (72%), Gaps = 2/136 (1%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIE--TEDKEADQPVERPR 233 M D D+++ D+G ++ ++ E+++ D+ N + D + IE T + + R Sbjct: 1 MDDGDFDNDDVGGDD------FDDVEEDDNIDEINQEEDGDNIELITPGQAGGGVPKSKR 54 Query: 234 RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413 T+KYMTKYERAR+LGTRALQI+M AP+MVELEGETDPL+IAMKEL++RKIP IRRYLP Sbjct: 55 ITTKYMTKYERARVLGTRALQIAMCAPIMVELEGETDPLQIAMKELKQRKIPIIIRRYLP 114 Query: 414 DGSYEDWGVDELIVED 461 D SYEDW +DELI+ D Sbjct: 115 DASYEDWSIDELIIID 130 [40][TOP] >UniRef100_A8QC94 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative n=1 Tax=Brugia malayi RepID=A8QC94_BRUMA Length = 128 Score = 140 bits (353), Expect = 7e-32 Identities = 78/128 (60%), Positives = 93/128 (72%), Gaps = 7/128 (5%) Frame = +3 Query: 99 EEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSK-------YMTK 257 E+E E E+E A++ ++Q DDLD EP E +D E Q VE +T+ +MTK Sbjct: 3 EDEDYEGEME--ADDFGDEEQMDDLDLEPAE-DDTERIQVVEGSEKTASTERVTTPFMTK 59 Query: 258 YERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWG 437 YERARILGTRALQI+M APVMVELEGETDPLEIA KEL+ +KIP +RRYLPDGS+EDW Sbjct: 60 YERARILGTRALQIAMGAPVMVELEGETDPLEIARKELKHQKIPLIVRRYLPDGSFEDWS 119 Query: 438 VDELIVED 461 VDEL V D Sbjct: 120 VDELDVTD 127 [41][TOP] >UniRef100_A5DQ74 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii RepID=A5DQ74_PICGU Length = 158 Score = 140 bits (352), Expect = 9e-32 Identities = 77/143 (53%), Positives = 96/143 (67%), Gaps = 13/143 (9%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIET-----ED--------KEA 209 DD++ D ++E EPE + A+ + D + D I ED KE Sbjct: 16 DDFDQPDHFSDDEFQEPEGDNDAQAANGDVEMKAADGRTIVNGGLGPEDSLRRAKTAKEL 75 Query: 210 DQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIP 389 P E+ R T+ YMTKYERARILGTRALQIS+NAPV+V++EGETDPL+IAMKEL +RK+P Sbjct: 76 SIPKEK-RTTTPYMTKYERARILGTRALQISLNAPVLVDIEGETDPLQIAMKELTQRKVP 134 Query: 390 FTIRRYLPDGSYEDWGVDELIVE 458 +RRYLPDGSYEDWG DELIV+ Sbjct: 135 LVVRRYLPDGSYEDWGCDELIVD 157 [42][TOP] >UniRef100_UPI00016E7833 UPI00016E7833 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E7833 Length = 127 Score = 139 bits (351), Expect = 1e-31 Identities = 76/133 (57%), Positives = 93/133 (69%), Gaps = 1/133 (0%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQN-DDLDAEPIETEDKEADQPVERPRRTS 242 +D+++D D EE +EG + D +N +D D E ++ Q + R T+ Sbjct: 5 EDNFDDGDFDDAEE------DEGLD----DLENVEDEDQENVQILPAGEGQQANQKRITT 54 Query: 243 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 422 YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGS Sbjct: 55 PYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYLPDGS 114 Query: 423 YEDWGVDELIVED 461 YEDWG DELI+ D Sbjct: 115 YEDWGCDELIISD 127 [43][TOP] >UniRef100_Q01F81 RNA polymerase subunit K (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01F81_OSTTA Length = 149 Score = 139 bits (350), Expect = 2e-31 Identities = 72/137 (52%), Positives = 90/137 (65%), Gaps = 12/137 (8%) Frame = +3 Query: 87 DMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR---------- 236 D G + + +E +E++ D + D D I D+ D RR Sbjct: 7 DYGDDVDDVVDALEAAEDEDERDLEGGDADGRVIVESDERGDALGTHGRRGTGGAVPRHL 66 Query: 237 --TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410 T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGETDPLEIA KELRE+++PF +RRYL Sbjct: 67 RTTTPYMTKYERARVLGTRALQISMNAPVLVQLEGETDPLEIAGKELREKRVPFVVRRYL 126 Query: 411 PDGSYEDWGVDELIVED 461 PDGSYEDW ++ELIV D Sbjct: 127 PDGSYEDWCIEELIVHD 143 [44][TOP] >UniRef100_C1BL50 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide n=1 Tax=Osmerus mordax RepID=C1BL50_OSMMO Length = 127 Score = 139 bits (349), Expect = 2e-31 Identities = 71/123 (57%), Positives = 89/123 (72%), Gaps = 2/123 (1%) Frame = +3 Query: 99 EEEPPEPEIEEGAEEEDPD--KQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERAR 272 E+ + + ++G E+E D + +D D E ++ Q + R T++YMTKYERAR Sbjct: 5 EDNFDDGDFDDGEEDEGMDDLENAEDEDRENVQILPAGEGQQANQKRITTQYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPD SYEDWG DELI Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLQIAMKELKGRKIPIIIRRYLPDASYEDWGCDELI 124 Query: 453 VED 461 + D Sbjct: 125 ITD 127 [45][TOP] >UniRef100_A3LVF6 Subunit common to RNA polymerases I, II, and III n=1 Tax=Pichia stipitis RepID=A3LVF6_PICST Length = 157 Score = 139 bits (349), Expect = 2e-31 Identities = 73/140 (52%), Positives = 92/140 (65%), Gaps = 10/140 (7%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERP------ 230 DD++ D E++ EPE E + + +D A+QP ++ Sbjct: 17 DDFDQPDHFSEDDFQEPEGEANGDATMKTADGKTIINGGFGPDDASANQPRQKTAKELAI 76 Query: 231 ----RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTI 398 R T+ YMTKYERAR+LGTRALQIS+NAPV+V++EGETDPL+IAMKEL +RKIP I Sbjct: 77 PKEKRTTTPYMTKYERARVLGTRALQISLNAPVLVDIEGETDPLQIAMKELAQRKIPLVI 136 Query: 399 RRYLPDGSYEDWGVDELIVE 458 RRYLPDGSYEDWG DELIV+ Sbjct: 137 RRYLPDGSYEDWGCDELIVD 156 [46][TOP] >UniRef100_B5G123 Putative DNA directed RNA polymerase II polypeptide F variant 2 n=1 Tax=Taeniopygia guttata RepID=B5G123_TAEGU Length = 127 Score = 138 bits (348), Expect = 3e-31 Identities = 73/123 (59%), Positives = 87/123 (70%), Gaps = 11/123 (8%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE-----------RPRRTSKYMTKYERAR 272 E+ + +D D +D E +E ++E + VE + R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLEDLENAEEEGQENVEILPSGERQQANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124 Query: 453 VED 461 + D Sbjct: 125 ITD 127 [47][TOP] >UniRef100_UPI00005ED52B PREDICTED: similar to RNA Polymerase II subunit 14.4 kD n=1 Tax=Monodelphis domestica RepID=UPI00005ED52B Length = 127 Score = 138 bits (347), Expect = 3e-31 Identities = 76/133 (57%), Positives = 93/133 (69%), Gaps = 1/133 (0%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEE-EDPDKQNDDLDAEPIETEDKEADQPVERPRRTS 242 +D+Y+ D EE +EG ++ E+P+++ E +E Q + R T+ Sbjct: 5 EDNYDGDDFDDVEE------DEGLDDLENPEEEGQ----ENVEILPSGERQQANQKRITT 54 Query: 243 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 422 YMTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGS Sbjct: 55 PYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGS 114 Query: 423 YEDWGVDELIVED 461 YEDWGVDELI+ D Sbjct: 115 YEDWGVDELIITD 127 [48][TOP] >UniRef100_C3KHY7 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Anoplopoma fimbria RepID=C3KHY7_9PERC Length = 127 Score = 138 bits (347), Expect = 3e-31 Identities = 76/133 (57%), Positives = 92/133 (69%), Gaps = 1/133 (0%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQN-DDLDAEPIETEDKEADQPVERPRRTS 242 +D+++D D EE +EG + D +N +D D E ++ Q R T+ Sbjct: 5 EDNFDDGDFDDAEE------DEGLD----DLENVEDGDRENVQILPAGEGQQANAKRITT 54 Query: 243 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 422 YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGS Sbjct: 55 PYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYLPDGS 114 Query: 423 YEDWGVDELIVED 461 YEDWG DELI+ D Sbjct: 115 YEDWGCDELIITD 127 [49][TOP] >UniRef100_Q3TN04 Putative uncharacterized protein n=1 Tax=Mus musculus RepID=Q3TN04_MOUSE Length = 127 Score = 138 bits (347), Expect = 3e-31 Identities = 74/123 (60%), Positives = 88/123 (71%), Gaps = 11/123 (8%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272 E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQASQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124 Query: 453 VED 461 + D Sbjct: 125 ISD 127 [50][TOP] >UniRef100_C1MWD5 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MWD5_9CHLO Length = 84 Score = 138 bits (347), Expect = 3e-31 Identities = 65/82 (79%), Positives = 76/82 (92%) Frame = +3 Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410 R T+ YMTKYERARILGTRALQISMNAPV+V+L+GETDPLEIA KELRE++IPFT+RRYL Sbjct: 1 RTTTPYMTKYERARILGTRALQISMNAPVLVQLDGETDPLEIAGKELREKRIPFTVRRYL 60 Query: 411 PDGSYEDWGVDELIVEDSWKRQ 476 PDGS+EDW VDELI+ED +R+ Sbjct: 61 PDGSFEDWSVDELIIEDPDRRR 82 [51][TOP] >UniRef100_P61219 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=2 Tax=Murinae RepID=RPAB2_MOUSE Length = 127 Score = 138 bits (347), Expect = 3e-31 Identities = 74/123 (60%), Positives = 88/123 (71%), Gaps = 11/123 (8%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272 E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124 Query: 453 VED 461 + D Sbjct: 125 ISD 127 [52][TOP] >UniRef100_P61218 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=3 Tax=Euarchontoglires RepID=RPAB2_HUMAN Length = 127 Score = 137 bits (346), Expect = 4e-31 Identities = 74/123 (60%), Positives = 88/123 (71%), Gaps = 11/123 (8%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272 E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124 Query: 453 VED 461 + D Sbjct: 125 ITD 127 [53][TOP] >UniRef100_Q17684 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Caenorhabditis elegans RepID=RPAB2_CAEEL Length = 137 Score = 137 bits (346), Expect = 4e-31 Identities = 75/137 (54%), Positives = 94/137 (68%), Gaps = 3/137 (2%) Frame = +3 Query: 60 MAD-DDYEDIDMG--YEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERP 230 MAD DDY+D+D ++ E IEE + D + ++DD E E D+ P Sbjct: 1 MADEDDYQDMDNDDFVDDNEMEDVIEEDPQRPDNEDEDDDNVDENFELFDQGKAVPTSE- 59 Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410 T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPLEIA KEL++R+IP +RRYL Sbjct: 60 HVTTPFMTKYERARVLGTRALQIAMGAPVMVELEGETDPLEIARKELKQRRIPIIVRRYL 119 Query: 411 PDGSYEDWGVDELIVED 461 PDGSYEDW D+L + D Sbjct: 120 PDGSYEDWPTDQLQLAD 136 [54][TOP] >UniRef100_UPI0001560797 PREDICTED: similar to DNA directed RNA polymerase II polypeptide F n=1 Tax=Equus caballus RepID=UPI0001560797 Length = 127 Score = 137 bits (345), Expect = 6e-31 Identities = 74/123 (60%), Positives = 88/123 (71%), Gaps = 11/123 (8%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272 E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLEKAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124 Query: 453 VED 461 + D Sbjct: 125 ITD 127 [55][TOP] >UniRef100_UPI0000EDD2AA PREDICTED: similar to RNA Polymerase II subunit 14.4 kD n=1 Tax=Ornithorhynchus anatinus RepID=UPI0000EDD2AA Length = 127 Score = 137 bits (345), Expect = 6e-31 Identities = 72/123 (58%), Positives = 87/123 (70%), Gaps = 11/123 (8%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE-----------RPRRTSKYMTKYERAR 272 E+ + +D D +D + +E ++E + VE + R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERQQANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124 Query: 453 VED 461 + D Sbjct: 125 ITD 127 [56][TOP] >UniRef100_Q6DDA6 Polymerase (RNA) II (DNA directed) polypeptide F n=2 Tax=Xenopus (Silurana) tropicalis RepID=Q6DDA6_XENTR Length = 127 Score = 137 bits (345), Expect = 6e-31 Identities = 72/114 (63%), Positives = 84/114 (73%), Gaps = 6/114 (5%) Frame = +3 Query: 138 EEEDPDKQNDDLDAEPIETEDKEA------DQPVERPRRTSKYMTKYERARILGTRALQI 299 ++ + D+ DDLD E ++ A Q + R T+ YMTKYERAR+LGTRALQI Sbjct: 14 DDVEEDEGLDDLDNAEEEDQENVAILPAGEGQQANQKRITTNYMTKYERARVLGTRALQI 73 Query: 300 SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 461 +M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI+ D Sbjct: 74 AMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 127 [57][TOP] >UniRef100_C1C4U6 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=2 Tax=Anura RepID=C1C4U6_RANCA Length = 127 Score = 137 bits (345), Expect = 6e-31 Identities = 74/116 (63%), Positives = 85/116 (73%), Gaps = 8/116 (6%) Frame = +3 Query: 138 EEEDPDKQNDDLDAEPIETEDKE--------ADQPVERPRRTSKYMTKYERARILGTRAL 293 ++ + D+ DDLD E ED+E Q + R T+ YMTKYERAR+LGTRAL Sbjct: 14 DDVEEDEGLDDLDNA--EEEDRENVAILPAGEGQQANQKRITTNYMTKYERARVLGTRAL 71 Query: 294 QISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 461 QI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI+ D Sbjct: 72 QIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 127 [58][TOP] >UniRef100_C4Y9V4 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y9V4_CLAL4 Length = 156 Score = 137 bits (345), Expect = 6e-31 Identities = 75/150 (50%), Positives = 94/150 (62%), Gaps = 9/150 (6%) Frame = +3 Query: 39 FNSLPLTMADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQN---------DDLDAEPIE 191 +N P D D D E P+P + + + ++ + DA+ Sbjct: 8 YNEAPENFEDFDAPDHFSDDEFADPDPVSHQNGNDAEMKAEDGRTIVHGGYSEADAQVRV 67 Query: 192 TEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKEL 371 KE P E R T+ YMTKYERAR+LGTRALQIS+NAPV+V++EGETDPL+IAMKEL Sbjct: 68 KTTKELAIPKE-DRTTTPYMTKYERARVLGTRALQISLNAPVLVDIEGETDPLQIAMKEL 126 Query: 372 RERKIPFTIRRYLPDGSYEDWGVDELIVED 461 +RKIP IRRYLPDGSYEDWG DELI+E+ Sbjct: 127 AQRKIPLVIRRYLPDGSYEDWGCDELIIEN 156 [59][TOP] >UniRef100_Q9PT88 RNA polymerase common subunit RPB6 n=2 Tax=Gallus gallus RepID=Q9PT88_CHICK Length = 127 Score = 137 bits (344), Expect = 8e-31 Identities = 72/123 (58%), Positives = 87/123 (70%), Gaps = 11/123 (8%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE-----------RPRRTSKYMTKYERAR 272 E+ + +D D +D + +E ++E + VE + R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENVEEEGQENVEILPSGERQAANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124 Query: 453 VED 461 + D Sbjct: 125 ITD 127 [60][TOP] >UniRef100_B9ENN4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Salmo salar RepID=B9ENN4_SALSA Length = 127 Score = 137 bits (344), Expect = 8e-31 Identities = 77/132 (58%), Positives = 93/132 (70%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSK 245 + DY+D D EE + E E+ED +++ P E +A+Q R T++ Sbjct: 5 EGDYDDGDFDDAEEDEGLDDLENVEDED----QENVKILPAG-EGSQANQK----RITTQ 55 Query: 246 YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSY 425 YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGSY Sbjct: 56 YMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKCRKIPIIIRRYLPDGSY 115 Query: 426 EDWGVDELIVED 461 EDWG DELI+ D Sbjct: 116 EDWGCDELIITD 127 [61][TOP] >UniRef100_C5M8H0 DNA-directed RNA polymerases I n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M8H0_CANTT Length = 213 Score = 137 bits (344), Expect = 8e-31 Identities = 75/141 (53%), Positives = 96/141 (68%), Gaps = 5/141 (3%) Frame = +3 Query: 51 PLTMADDDYEDI-----DMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQ 215 P +D++Y+D D + I G +D + N ++PI+ +E Sbjct: 77 PDHFSDNEYDDPTQNGGDAALQTTDGRTIINGGFGPDDAAQAN----SQPIKKTTRELAI 132 Query: 216 PVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 395 P ++ R T+ YMTKYERARILGTRALQIS+NAPV+V++EGETDPL+IAMKEL +RKIP Sbjct: 133 PKDK-RTTTPYMTKYERARILGTRALQISLNAPVLVDIEGETDPLQIAMKELAQRKIPLV 191 Query: 396 IRRYLPDGSYEDWGVDELIVE 458 IRRYLPDGSYEDWG DELIV+ Sbjct: 192 IRRYLPDGSYEDWGCDELIVD 212 [62][TOP] >UniRef100_B2R4H6 cDNA, FLJ92093, highly similar to Homo sapiens polymerase (RNA) II (DNA directed) polypeptide F (POLR2F), mRNA n=1 Tax=Homo sapiens RepID=B2R4H6_HUMAN Length = 127 Score = 136 bits (343), Expect = 1e-30 Identities = 74/123 (60%), Positives = 87/123 (70%), Gaps = 11/123 (8%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272 E+ + +D D +D + +E +E + VE RP R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAKEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124 Query: 453 VED 461 + D Sbjct: 125 ITD 127 [63][TOP] >UniRef100_UPI00004A5242 PREDICTED: similar to DNA directed RNA polymerase II polypeptide F isoform 1 n=1 Tax=Canis lupus familiaris RepID=UPI00004A5242 Length = 127 Score = 136 bits (342), Expect = 1e-30 Identities = 74/123 (60%), Positives = 87/123 (70%), Gaps = 11/123 (8%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272 E+ + +D D +D +E ++E + VE RP R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLGDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124 Query: 453 VED 461 + D Sbjct: 125 ITD 127 [64][TOP] >UniRef100_B9ELF2 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Salmo salar RepID=B9ELF2_SALSA Length = 127 Score = 136 bits (342), Expect = 1e-30 Identities = 74/125 (59%), Positives = 91/125 (72%), Gaps = 9/125 (7%) Frame = +3 Query: 114 EPEIEEGA-EEEDPDKQNDDLDAEPIETEDKE--------ADQPVERPRRTSKYMTKYER 266 E + ++G ++ + D+ DDL E +E ED+E + R T++YMTKYER Sbjct: 5 EGDFDDGDFDDAEEDEGLDDL--ENVEDEDQENVKILPAGEGSQANQKRITTQYMTKYER 62 Query: 267 ARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDE 446 AR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGSYEDWG DE Sbjct: 63 ARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKCRKIPIIIRRYLPDGSYEDWGCDE 122 Query: 447 LIVED 461 LI+ D Sbjct: 123 LIITD 127 [65][TOP] >UniRef100_Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Bos taurus RepID=RPAB2_BOVIN Length = 127 Score = 136 bits (342), Expect = 1e-30 Identities = 74/123 (60%), Positives = 87/123 (70%), Gaps = 11/123 (8%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272 E+ + +D D +D + +E ++E VE RP R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQVNVEILPSGERPQANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124 Query: 453 VED 461 + D Sbjct: 125 ITD 127 [66][TOP] >UniRef100_Q2F660 DNA-directed RNA polymerase subunit 6-like protein n=1 Tax=Bombyx mori RepID=Q2F660_BOMMO Length = 132 Score = 135 bits (341), Expect = 2e-30 Identities = 77/137 (56%), Positives = 96/137 (70%), Gaps = 3/137 (2%) Frame = +3 Query: 60 MADDDYEDIDMG--YEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPR 233 MAD++YE D G Y++ E + E EE++ D N A +A V++ + Sbjct: 1 MADEEYEADDGGADYDDIAEEDDNIEETEEQEEDGYNVQCLAWG------QAGGGVDKSK 54 Query: 234 R-TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410 R T++YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ KIP IRRYL Sbjct: 55 RITTRYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKHGKIPIIIRRYL 114 Query: 411 PDGSYEDWGVDELIVED 461 PD SYEDW +DELI+ D Sbjct: 115 PDHSYEDWSIDELIIID 131 [67][TOP] >UniRef100_Q59QT0 DNA-directed RNA polymerases I n=1 Tax=Candida albicans RepID=Q59QT0_CANAL Length = 157 Score = 135 bits (341), Expect = 2e-30 Identities = 70/100 (70%), Positives = 81/100 (81%), Gaps = 2/100 (2%) Frame = +3 Query: 165 DDLDA--EPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGE 338 DD A +P + KE P E+ R T+ YMTKYERARILGTRALQIS+NAPV+V++EGE Sbjct: 58 DDAQAAGQPRKKTTKELAIPKEK-RTTTPYMTKYERARILGTRALQISLNAPVLVDIEGE 116 Query: 339 TDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 TDPL+IAMKEL +RKIP IRRYLPDGSYEDWG DELIV+ Sbjct: 117 TDPLQIAMKELAQRKIPLVIRRYLPDGSYEDWGCDELIVD 156 [68][TOP] >UniRef100_B9WHP7 RNA polymerase subunit common to RNA polymerases I, II, and III, putative n=1 Tax=Candida dubliniensis CD36 RepID=B9WHP7_CANDC Length = 157 Score = 135 bits (340), Expect = 2e-30 Identities = 67/94 (71%), Positives = 79/94 (84%) Frame = +3 Query: 177 AEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEI 356 ++P + KE P E+ R T+ YMTKYERARILGTRALQIS+NAPV+V++EGETDPL+I Sbjct: 64 SQPRKKTTKELAIPKEK-RTTTPYMTKYERARILGTRALQISLNAPVLVDIEGETDPLQI 122 Query: 357 AMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 AMKEL +RKIP IRRYLPDGSYEDWG DELIV+ Sbjct: 123 AMKELAQRKIPLVIRRYLPDGSYEDWGCDELIVD 156 [69][TOP] >UniRef100_A8WSV7 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Caenorhabditis briggsae RepID=RPAB2_CAEBR Length = 138 Score = 135 bits (340), Expect = 2e-30 Identities = 72/135 (53%), Positives = 94/135 (69%), Gaps = 3/135 (2%) Frame = +3 Query: 66 DDDYEDIDMG--YEEEPPEPEIEEGAEEEDPDKQNDDLDA-EPIETEDKEADQPVERPRR 236 DDDY+D+D ++ E IEE + D ++++DD + E E D+ P Sbjct: 4 DDDYQDMDNDDFVDDNEMEDVIEEEQQRPDHEEEDDDNNVDENFELFDQGKAVPTSE-HV 62 Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416 T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPLEIA KEL++R++P IRRYLPD Sbjct: 63 TTPFMTKYERARVLGTRALQIAMGAPVMVELEGETDPLEIARKELKQRRVPIIIRRYLPD 122 Query: 417 GSYEDWGVDELIVED 461 GSYEDW ++L + D Sbjct: 123 GSYEDWPTEQLQLAD 137 [70][TOP] >UniRef100_UPI000180D2B9 PREDICTED: similar to DNA directed RNA polymerase II polypeptide F n=1 Tax=Ciona intestinalis RepID=UPI000180D2B9 Length = 128 Score = 135 bits (339), Expect = 3e-30 Identities = 69/117 (58%), Positives = 89/117 (76%), Gaps = 6/117 (5%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDA-----EPIETEDKEADQPVERPRR-TSKYMTKYERARILGTR 287 ++G + +D N+ LDA + +E D + +E +R T+ Y+TKYERAR+LGTR Sbjct: 13 DDGGDMDDVGDANE-LDAVEDEGQGVEILDATEGRQIEPTKRITTPYLTKYERARVLGTR 71 Query: 288 ALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 ALQ+SMNAPVMVELEGETDPL+IAMKEL+ +KIP IRRY+PDGSYEDW +DELI+E Sbjct: 72 ALQLSMNAPVMVELEGETDPLQIAMKELKAKKIPIIIRRYMPDGSYEDWAIDELIIE 128 [71][TOP] >UniRef100_C1BXK5 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Esox lucius RepID=C1BXK5_ESOLU Length = 127 Score = 135 bits (339), Expect = 3e-30 Identities = 74/125 (59%), Positives = 91/125 (72%), Gaps = 9/125 (7%) Frame = +3 Query: 114 EPEIEEGA-EEEDPDKQNDDLDAEPIETEDKEADQ--------PVERPRRTSKYMTKYER 266 E + ++G ++ + D+ DDL E +E +D+E Q + R T+ YMTKYER Sbjct: 5 EGDFDDGDFDDAEEDEGLDDL--ENVEDDDQENVQILPAGEGSQANQKRITTPYMTKYER 62 Query: 267 ARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDE 446 AR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGSYEDWG DE Sbjct: 63 ARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKCRKIPIIIRRYLPDGSYEDWGCDE 122 Query: 447 LIVED 461 LI+ D Sbjct: 123 LIITD 127 [72][TOP] >UniRef100_B4JSM8 GH17834 n=1 Tax=Drosophila grimshawi RepID=B4JSM8_DROGR Length = 131 Score = 135 bits (339), Expect = 3e-30 Identities = 71/137 (51%), Positives = 98/137 (71%), Gaps = 2/137 (1%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPD-KQNDDLDAEPIETEDKEADQPVERPRR 236 M + DY++ D+G ++ ++ E+ D D Q +++D I A V + +R Sbjct: 1 MDEGDYDNDDVGNDD------FDDADEDVDEDIAQEEEVDNIEIIAPGGTAGGGVPKSKR 54 Query: 237 -TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413 T+KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRRYLP Sbjct: 55 ITTKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLP 114 Query: 414 DGSYEDWGVDELIVEDS 464 D SYEDW +DEL++ D+ Sbjct: 115 DHSYEDWSIDELVMVDN 131 [73][TOP] >UniRef100_Q6C2U5 YALI0F05082p n=1 Tax=Yarrowia lipolytica RepID=Q6C2U5_YARLI Length = 152 Score = 135 bits (339), Expect = 3e-30 Identities = 72/139 (51%), Positives = 94/139 (67%), Gaps = 12/139 (8%) Frame = +3 Query: 78 EDIDMGYEEEPPE--PEIEEGAEEEDPDKQNDD---LDAEPIETEDKEADQPVERP---- 230 ++ + YEEE E ++EE EE D D ++ E +E +K + R Sbjct: 13 DNFENAYEEEFEEHVSDVEENGEEVKTDVAEDGRQIVNGEGVENFEKAVRRKTVRELAIP 72 Query: 231 ---RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 401 R T+ YMTKYERAR+LGTRALQISMNAP++V++E TDPL+IAMKEL+++KIP IR Sbjct: 73 REERTTTPYMTKYERARVLGTRALQISMNAPILVDIENATDPLQIAMKELQQKKIPLVIR 132 Query: 402 RYLPDGSYEDWGVDELIVE 458 RYLPDGS+EDWG DELIV+ Sbjct: 133 RYLPDGSFEDWGCDELIVD 151 [74][TOP] >UniRef100_UPI0001A2CF73 hypothetical protein LOC436817 n=1 Tax=Danio rerio RepID=UPI0001A2CF73 Length = 97 Score = 134 bits (338), Expect = 4e-30 Identities = 66/96 (68%), Positives = 76/96 (79%) Frame = +3 Query: 174 DAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLE 353 D E ++ Q + R T++YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+ Sbjct: 2 DQENVQILPAGEGQQANQKRITTQYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQ 61 Query: 354 IAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 461 IAMKEL+ RKIP IRRYLPDGSYEDWG DELI+ D Sbjct: 62 IAMKELKSRKIPIIIRRYLPDGSYEDWGCDELIITD 97 [75][TOP] >UniRef100_C3KH99 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Anoplopoma fimbria RepID=C3KH99_9PERC Length = 127 Score = 134 bits (338), Expect = 4e-30 Identities = 74/133 (55%), Positives = 91/133 (68%), Gaps = 1/133 (0%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQN-DDLDAEPIETEDKEADQPVERPRRTS 242 +D+++D D EE +EG + D +N +D D E ++ Q R T+ Sbjct: 5 EDNFDDGDFDDAEE------DEGLD----DLENVEDGDRENVQILPAGEGQQANAKRITT 54 Query: 243 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 422 YMTKYERAR+LGTRALQI+ APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGS Sbjct: 55 PYMTKYERARVLGTRALQIATCAPVMVELEGETDPLQIAMKELKSRKIPTIIRRYLPDGS 114 Query: 423 YEDWGVDELIVED 461 YEDWG DEL++ D Sbjct: 115 YEDWGCDELVITD 127 [76][TOP] >UniRef100_B8C3F5 Dna-directed RNA polymerase i (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C3F5_THAPS Length = 76 Score = 134 bits (338), Expect = 4e-30 Identities = 63/76 (82%), Positives = 72/76 (94%) Frame = +3 Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410 R T++Y+TKYERAR+LGTRALQISMNAPVMV+LEGETDPL+IA KELRERKIP IRRYL Sbjct: 1 RITTRYLTKYERARVLGTRALQISMNAPVMVDLEGETDPLKIAQKELRERKIPIVIRRYL 60 Query: 411 PDGSYEDWGVDELIVE 458 PDGS+EDWG+DELIV+ Sbjct: 61 PDGSHEDWGIDELIVD 76 [77][TOP] >UniRef100_A4RSJ5 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RSJ5_OSTLU Length = 81 Score = 134 bits (338), Expect = 4e-30 Identities = 62/75 (82%), Positives = 71/75 (94%) Frame = +3 Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410 R T+ YMTKYERARILGTRALQISMNAPV+V+LEGETDPLEIA KELRE+++PF +RRY+ Sbjct: 7 RTTTPYMTKYERARILGTRALQISMNAPVLVQLEGETDPLEIAGKELREKRVPFVVRRYM 66 Query: 411 PDGSYEDWGVDELIV 455 PDGSYEDWG+DELIV Sbjct: 67 PDGSYEDWGIDELIV 81 [78][TOP] >UniRef100_B3LZJ3 GF17248 n=1 Tax=Drosophila ananassae RepID=B3LZJ3_DROAN Length = 131 Score = 134 bits (338), Expect = 4e-30 Identities = 71/137 (51%), Positives = 103/137 (75%), Gaps = 2/137 (1%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEE-DPDKQNDDLDAEPIETEDKEADQPVERPRR 236 M D +Y++ D+G ++ +++E +E+ +P+++ D+++ I A V + +R Sbjct: 1 MDDGEYDNDDVGGDDFD---DVDEDVDEDINPEEEVDNIE---IIAPGGAAGGGVPKSKR 54 Query: 237 -TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP 413 T+KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRRYLP Sbjct: 55 ITTKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLP 114 Query: 414 DGSYEDWGVDELIVEDS 464 D SYEDW +DELI+ D+ Sbjct: 115 DHSYEDWSIDELIMVDN 131 [79][TOP] >UniRef100_Q1DXT5 Putative uncharacterized protein n=1 Tax=Coccidioides immitis RepID=Q1DXT5_COCIM Length = 142 Score = 134 bits (338), Expect = 4e-30 Identities = 69/137 (50%), Positives = 98/137 (71%), Gaps = 10/137 (7%) Frame = +3 Query: 72 DYEDID-MGYEEEPPEPEIEEGAEEE--DPDKQNDDL-------DAEPIETEDKEADQPV 221 D+ED D G++ EPPE + + E+ P+++ ++ D +P+ + +E P Sbjct: 7 DHEDRDETGFDYEPPEYDYIDNEPEDYVSPEQEAEEGAYAVLNGDGQPVMLQQREKKVPN 66 Query: 222 ERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 401 ++ R T+ YMTKYERAR+LGTRALQISMNAP++V+LEGETDPL+IA+KEL ++KIP +R Sbjct: 67 DQ-RTTTPYMTKYERARVLGTRALQISMNAPILVDLEGETDPLQIALKELNQKKIPLIVR 125 Query: 402 RYLPDGSYEDWGVDELI 452 RYLPDG YEDW +EL+ Sbjct: 126 RYLPDGWYEDWTCEELL 142 [80][TOP] >UniRef100_UPI00004EEF96 PREDICTED: similar to DNA directed RNA polymerase II polypeptide F n=1 Tax=Bos taurus RepID=UPI00004EEF96 Length = 127 Score = 134 bits (337), Expect = 5e-30 Identities = 72/121 (59%), Positives = 87/121 (71%), Gaps = 11/121 (9%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272 E+ + +D D +D + +E ++E + VE RP R T+ YMTKYE+AR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYEQAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDWGVDELI Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELI 124 Query: 453 V 455 + Sbjct: 125 I 125 [81][TOP] >UniRef100_C3KI93 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Anoplopoma fimbria RepID=C3KI93_9PERC Length = 127 Score = 134 bits (337), Expect = 5e-30 Identities = 72/132 (54%), Positives = 90/132 (68%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSK 245 +D+++D D EE + +++ ED D++N ++ Q R T+ Sbjct: 5 EDNFDDGDFDDAEE--DGGLDDLENVEDGDREN-------VQILPAGEGQQANAKRITTP 55 Query: 246 YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSY 425 YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ RKIP IRRY PDGSY Sbjct: 56 YMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYPPDGSY 115 Query: 426 EDWGVDELIVED 461 EDWG DELI+ D Sbjct: 116 EDWGCDELIITD 127 [82][TOP] >UniRef100_Q296B8 GA11109 n=2 Tax=pseudoobscura subgroup RepID=Q296B8_DROPS Length = 131 Score = 133 bits (335), Expect = 8e-30 Identities = 70/136 (51%), Positives = 100/136 (73%), Gaps = 1/136 (0%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEE-DPDKQNDDLDAEPIETEDKEADQPVERPRR 236 M ++DY + D+G ++ +++E +E+ +P+++ D++ E I + R Sbjct: 1 MDEEDYGNDDVGGDDFD---DVDEDVDEDINPEEEADNI--EIIAPGGTGGGGVPKSKRI 55 Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416 T+KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRRYLPD Sbjct: 56 TTKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLPD 115 Query: 417 GSYEDWGVDELIVEDS 464 SYEDW +DELI+ D+ Sbjct: 116 HSYEDWSIDELIMVDN 131 [83][TOP] >UniRef100_Q6BPY7 DEHA2E09812p n=1 Tax=Debaryomyces hansenii RepID=Q6BPY7_DEBHA Length = 158 Score = 133 bits (334), Expect = 1e-29 Identities = 70/141 (49%), Positives = 94/141 (66%), Gaps = 11/141 (7%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIE-EGAEEEDPDKQ--------NDDLDAEPIETEDKEADQPV 221 +D++ D E++ EP E E D + + N L + ++ K A + Sbjct: 17 EDFDQADHFSEDDFNEPAAENENVNNGDVEMKATDGRTIINGGLGPDEVQPRPKSARELA 76 Query: 222 --ERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 395 + R T+ YMTKYERAR+LGTRALQIS+NAPV+V++EGETDPL+IAMKEL +RKIP Sbjct: 77 VPKEDRTTTPYMTKYERARVLGTRALQISLNAPVLVDIEGETDPLQIAMKELAQRKIPLV 136 Query: 396 IRRYLPDGSYEDWGVDELIVE 458 +RRYLPDGS+EDWG DELI++ Sbjct: 137 VRRYLPDGSFEDWGCDELIID 157 [84][TOP] >UniRef100_Q24320 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=3 Tax=melanogaster subgroup RepID=RPAB2_DROME Length = 131 Score = 133 bits (334), Expect = 1e-29 Identities = 70/135 (51%), Positives = 96/135 (71%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 M D DY++ D+G ++ +++E +E+ ++ D + E I + R T Sbjct: 1 MDDADYDNDDVGGDDFD---DVDEDVDEDINQEEEAD-NIEIIAPGGAGGGGVPKSKRIT 56 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 +KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRRYLPD Sbjct: 57 TKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLPDH 116 Query: 420 SYEDWGVDELIVEDS 464 SYEDW +DELI+ D+ Sbjct: 117 SYEDWSIDELIMVDN 131 [85][TOP] >UniRef100_C4R1V1 RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III n=1 Tax=Pichia pastoris GS115 RepID=C4R1V1_PICPG Length = 155 Score = 132 bits (333), Expect = 1e-29 Identities = 62/81 (76%), Positives = 73/81 (90%) Frame = +3 Query: 219 VERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTI 398 ++ R T+ Y+TKYERARILGTRALQISMNAPV+V++EGETDPL+IAMKEL +RKIP I Sbjct: 75 LKEERTTTPYLTKYERARILGTRALQISMNAPVLVDIEGETDPLQIAMKELSQRKIPLVI 134 Query: 399 RRYLPDGSYEDWGVDELIVED 461 RRYLPDGSYEDWG DELIV++ Sbjct: 135 RRYLPDGSYEDWGCDELIVDN 155 [86][TOP] >UniRef100_Q54FA8 DNA-directed RNA polymerases I, II, and III subunit rpabc2 n=1 Tax=Dictyostelium discoideum RepID=RPAB2_DICDI Length = 133 Score = 132 bits (333), Expect = 1e-29 Identities = 72/133 (54%), Positives = 89/133 (66%), Gaps = 1/133 (0%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEG-AEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR 236 MAD + D GYEE EE EE + + D+ + EA + R+ Sbjct: 1 MADFEGGGDDGGYEEFDEGGGFEEEYVEETETTEAYTDIIDPSADANTAEAGRIPNHLRK 60 Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416 T++YMTKYERAR+LG+RALQISMNAP+MVELEGETDPL+IA KELR +KIP IRR+LP+ Sbjct: 61 TTRYMTKYERARLLGSRALQISMNAPIMVELEGETDPLQIAWKELRAKKIPLIIRRFLPN 120 Query: 417 GSYEDWGVDELIV 455 G YEDW VDEL + Sbjct: 121 GMYEDWSVDELSI 133 [87][TOP] >UniRef100_B7FS37 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FS37_PHATR Length = 129 Score = 132 bits (332), Expect = 2e-29 Identities = 70/124 (56%), Positives = 85/124 (68%), Gaps = 4/124 (3%) Frame = +3 Query: 99 EEEPPEPEIEEGAEEE----DPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYER 266 +E+P E ++ EE+ D DD I + R T++Y+TKYER Sbjct: 6 DEDPMEDGTQQIREEDEDGLDISGDRDDGGETTIVGIGPDGGGTARSERITTRYLTKYER 65 Query: 267 ARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDE 446 AR+LGTRALQISMNAPVMV+L+GETDPL IA KELRERKIP IRRYLPDGS+EDW VDE Sbjct: 66 ARVLGTRALQISMNAPVMVDLDGETDPLRIAEKELRERKIPIIIRRYLPDGSHEDWSVDE 125 Query: 447 LIVE 458 L+V+ Sbjct: 126 LVVD 129 [88][TOP] >UniRef100_B4KC04 GI22548 n=1 Tax=Drosophila mojavensis RepID=B4KC04_DROMO Length = 131 Score = 132 bits (332), Expect = 2e-29 Identities = 70/136 (51%), Positives = 99/136 (72%), Gaps = 1/136 (0%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR- 236 M D +Y++ D+G ++ +++E +E+ Q +++D I A V + +R Sbjct: 1 MDDGEYDNDDVGGDDFD---DVDEDVDEDIA--QEEEVDNIEIIAPGGAAGGGVPKSKRI 55 Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416 T+KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRR+LPD Sbjct: 56 TTKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRFLPD 115 Query: 417 GSYEDWGVDELIVEDS 464 SYEDW +DELI+ D+ Sbjct: 116 HSYEDWSIDELIMVDN 131 [89][TOP] >UniRef100_C5DB92 KLTH0A00660p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DB92_LACTC Length = 155 Score = 132 bits (332), Expect = 2e-29 Identities = 75/148 (50%), Positives = 92/148 (62%), Gaps = 8/148 (5%) Frame = +3 Query: 39 FNSLPLTMADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQ--NDDLDAEPIETEDKEAD 212 FN P D D E + PE E ++G +++ K AE + + Sbjct: 8 FNDGPENFEDFDNEHFSDAEVYDAPE-EFKDGETKDESGKTIITGGTGAEDFQQHESNRK 66 Query: 213 QPVERP------RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR 374 + ++ R T+ YMTKYERARILGTRALQISMNAPV V+LEGETDPL IAMKEL Sbjct: 67 RTLKEKAIPKDERTTTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELA 126 Query: 375 ERKIPFTIRRYLPDGSYEDWGVDELIVE 458 E+KIP IRRYLPDGS+EDW V+ELIV+ Sbjct: 127 EKKIPLVIRRYLPDGSFEDWSVEELIVD 154 [90][TOP] >UniRef100_A7TF04 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TF04_VANPO Length = 153 Score = 132 bits (332), Expect = 2e-29 Identities = 74/133 (55%), Positives = 91/133 (68%), Gaps = 4/133 (3%) Frame = +3 Query: 72 DYEDIDMGYEEEPPEPE----IEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 D E+ + G+ + + E I G D ++QND + + KE P + R T Sbjct: 25 DEENFEEGFRDGETKNEEGKTIITGGLGPDDNQQNDIFRRKTL----KERAIP-KNDRTT 79 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 + YMTKYERARILGTRALQISMNAPV V+LEGETDPL IAMKEL E+KIP IRRYLPDG Sbjct: 80 TPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELAEKKIPLVIRRYLPDG 139 Query: 420 SYEDWGVDELIVE 458 S+EDW V+EL+V+ Sbjct: 140 SFEDWSVEELVVD 152 [91][TOP] >UniRef100_A5E2K4 DNA-directed RNA polymerases I n=1 Tax=Lodderomyces elongisporus RepID=A5E2K4_LODEL Length = 165 Score = 132 bits (332), Expect = 2e-29 Identities = 65/86 (75%), Positives = 75/86 (87%) Frame = +3 Query: 201 KEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 380 +E P E+ R T+ YMTKYERARILGTRALQIS+NAPV+V++EGETDPL+IAMKEL +R Sbjct: 80 RELAIPKEK-RTTTPYMTKYERARILGTRALQISLNAPVLVDIEGETDPLQIAMKELAQR 138 Query: 381 KIPFTIRRYLPDGSYEDWGVDELIVE 458 KIP IRRYLPDGSYEDWG DELIV+ Sbjct: 139 KIPLVIRRYLPDGSYEDWGCDELIVD 164 [92][TOP] >UniRef100_P20435 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=4 Tax=Saccharomyces cerevisiae RepID=RPAB2_YEAST Length = 155 Score = 132 bits (332), Expect = 2e-29 Identities = 76/150 (50%), Positives = 95/150 (63%), Gaps = 19/150 (12%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDP---DKQNDDLDAEPIET-----EDKEADQPV 221 ++ + D + +E+ E +E EE P D + D + + I T ED + + + Sbjct: 5 EEAFNDGNENFEDFDVEHFSDEETYEEKPQFKDGETTDANGKTIVTGGNGPEDFQQHEQI 64 Query: 222 ERP-----------RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKE 368 R R T+ YMTKYERARILGTRALQISMNAPV V+LEGETDPL IAMKE Sbjct: 65 RRKTLKEKAIPKDQRATTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKE 124 Query: 369 LRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 L E+KIP IRRYLPDGS+EDW V+ELIV+ Sbjct: 125 LAEKKIPLVIRRYLPDGSFEDWSVEELIVD 154 [93][TOP] >UniRef100_Q3TES3 Putative uncharacterized protein n=1 Tax=Mus musculus RepID=Q3TES3_MOUSE Length = 127 Score = 131 bits (330), Expect = 3e-29 Identities = 72/123 (58%), Positives = 86/123 (69%), Gaps = 11/123 (8%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPV------ERP-----RRTSKYMTKYERAR 272 E+ + +D D +D + +E ++E + V ERP R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVKILPSGERPQANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +LGTRALQI+M APVMVELE ETDPL IAMK L+ RKIP IRRYLPDGSYEDWGVDELI Sbjct: 65 VLGTRALQIAMCAPVMVELELETDPLLIAMKGLKARKIPIIIRRYLPDGSYEDWGVDELI 124 Query: 453 VED 461 + D Sbjct: 125 ISD 127 [94][TOP] >UniRef100_B4I3Z2 GM10803 n=1 Tax=Drosophila sechellia RepID=B4I3Z2_DROSE Length = 131 Score = 131 bits (330), Expect = 3e-29 Identities = 69/135 (51%), Positives = 95/135 (70%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 M D DY++ +G ++ +++E +E+ ++ D + E I + R T Sbjct: 1 MDDADYDNCSVGGDDFD---DVDEDVDEDINQEEEAD-NIEIIAPGGAGGGGVPKSKRIT 56 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 +KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRRYLPD Sbjct: 57 TKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRYLPDH 116 Query: 420 SYEDWGVDELIVEDS 464 SYEDW +DELI+ D+ Sbjct: 117 SYEDWSIDELIMVDN 131 [95][TOP] >UniRef100_Q2H6G6 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2H6G6_CHAGB Length = 160 Score = 131 bits (330), Expect = 3e-29 Identities = 72/138 (52%), Positives = 92/138 (66%), Gaps = 13/138 (9%) Frame = +3 Query: 78 EDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLD-----------AEPIETEDKE-ADQPV 221 ED D YE EP E ++ A + + +N D D A + DK D+ + Sbjct: 22 EDPDEYYEPEPEPAEEDDAARAPELEGENQDADHVVASGDPNAAANHGKGNDKSHKDKKI 81 Query: 222 ERPRRTSK-YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTI 398 +RT+ +MTKYE+ARILGTRALQISMNAPV+V+LEGETDPL+IA+KELRE+KIP + Sbjct: 82 PNDQRTTTPFMTKYEKARILGTRALQISMNAPVLVDLEGETDPLQIAIKELREKKIPLIV 141 Query: 399 RRYLPDGSYEDWGVDELI 452 RRYLPDG YEDW +EL+ Sbjct: 142 RRYLPDGYYEDWSCEELL 159 [96][TOP] >UniRef100_Q5KBQ4 DNA-directed RNA polymerases I, II, and III polypeptide, putative n=1 Tax=Filobasidiella neoformans RepID=Q5KBQ4_CRYNE Length = 148 Score = 131 bits (329), Expect = 4e-29 Identities = 80/150 (53%), Positives = 102/150 (68%), Gaps = 16/150 (10%) Frame = +3 Query: 60 MADD---DYEDIDMG-YEEEPPEP-----EIEEGAEEEDPDKQNDDLDAEPIETEDKEAD 212 M+DD D D + G YE++ +P E EE AEEE + + D+ IE+ E D Sbjct: 1 MSDDERMDTGDFEGGDYEQDYVDPDTLNYENEENAEEEAANGEVDETMI--IESGAPEGD 58 Query: 213 QP----VERP---RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKEL 371 +P +P R T+ YMTKYERAR+LGTRALQISMNAPV+V +EGE+DPLEIA+KEL Sbjct: 59 RPRTGKAAKPNEIRVTTPYMTKYERARVLGTRALQISMNAPVLVPVEGESDPLEIAIKEL 118 Query: 372 RERKIPFTIRRYLPDGSYEDWGVDELIVED 461 +KIP IRRYLPD S+EDW V+ELIV++ Sbjct: 119 AAKKIPLVIRRYLPDNSFEDWKVEELIVQE 148 [97][TOP] >UniRef100_B4M5E9 GJ11106 n=1 Tax=Drosophila virilis RepID=B4M5E9_DROVI Length = 131 Score = 130 bits (328), Expect = 5e-29 Identities = 69/136 (50%), Positives = 98/136 (72%), Gaps = 1/136 (0%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR- 236 M D +Y++ D+G ++ +++E +E+ Q +++D I V + +R Sbjct: 1 MDDGEYDNDDVGGDDFD---DVDEDVDEDIA--QEEEVDNIEIIAPGGAGGGGVPKSKRI 55 Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416 T+KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRR+LPD Sbjct: 56 TTKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRFLPD 115 Query: 417 GSYEDWGVDELIVEDS 464 SYEDW +DELI+ D+ Sbjct: 116 HSYEDWSIDELIMVDN 131 [98][TOP] >UniRef100_Q5CXV6 DNA-directed RNA polymerase subunit n=2 Tax=Cryptosporidium RepID=Q5CXV6_CRYPV Length = 129 Score = 130 bits (327), Expect = 7e-29 Identities = 68/130 (52%), Positives = 92/130 (70%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKY 248 +DY++ Y+EE E E EE + D+ + L + + + + +P E PR T+ Y Sbjct: 2 NDYDESGGNYDEEEEYMEEELIEEEIEGDENIEILTEDAVHS--RYDGKPNEGPRITTPY 59 Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428 MTK+E+ARI+GTRALQISMNAPV + L+GETDPL IA KEL +KIPF IRRYLP+G+YE Sbjct: 60 MTKFEKARIIGTRALQISMNAPVAIPLDGETDPLLIAEKELYTKKIPFVIRRYLPNGNYE 119 Query: 429 DWGVDELIVE 458 DW +DELI++ Sbjct: 120 DWKIDELILD 129 [99][TOP] >UniRef100_C5L3X6 DNA-directed RNA polymerase subunit, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5L3X6_9ALVE Length = 138 Score = 130 bits (326), Expect = 9e-29 Identities = 68/125 (54%), Positives = 89/125 (71%), Gaps = 3/125 (2%) Frame = +3 Query: 87 DMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEAD---QPVERPRRTSKYMTK 257 D+ +E+ P++ A+EE D + + + T+ K+ D + E PRRTS YMTK Sbjct: 13 DLEVDEDDLMPDLN--ADEEVAGGSGDVITSGRVPTQPKDDDFVAREAEGPRRTSPYMTK 70 Query: 258 YERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWG 437 YERARI+GTRALQISMNAPVMV+ EGETDP+ IA KEL + IPF +RR+LPDG+YEDW Sbjct: 71 YERARIIGTRALQISMNAPVMVDTEGETDPMAIAEKELVAKVIPFIVRRFLPDGTYEDWK 130 Query: 438 VDELI 452 V+EL+ Sbjct: 131 VEELM 135 [100][TOP] >UniRef100_B6KD21 RNA polymerase II subunit RPB6, putative n=3 Tax=Toxoplasma gondii RepID=B6KD21_TOXGO Length = 146 Score = 130 bits (326), Expect = 9e-29 Identities = 68/130 (52%), Positives = 90/130 (69%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKY 248 DD+ + D G +E + ++E A + ++D LD A +P E PR TS Y Sbjct: 19 DDFGE-DFGDDELIDDFDVERAAAAASHEPESDILDPSDPRAARPHA-RPSEGPRITSPY 76 Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428 +TK+E+AR++GTRALQISMNAP+ + L+GETDPL IA KEL ++ IPFTIRRYLPDGSYE Sbjct: 77 ITKFEKARVIGTRALQISMNAPITIPLDGETDPLIIAEKELYQKTIPFTIRRYLPDGSYE 136 Query: 429 DWGVDELIVE 458 DW + ELIV+ Sbjct: 137 DWKIQELIVD 146 [101][TOP] >UniRef100_Q6FSJ7 Strain CBS138 chromosome G complete sequence n=1 Tax=Candida glabrata RepID=Q6FSJ7_CANGA Length = 159 Score = 130 bits (326), Expect = 9e-29 Identities = 71/145 (48%), Positives = 93/145 (64%), Gaps = 15/145 (10%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDL------------DAEPIETEDKEAD 212 +++ED D+ + + + E E ++ D+ D + +ET ++ Sbjct: 13 ENFEDFDVEHFSDEDQYEDNVKTEANGGEQMKDEEGRTIVTGGMGPEDYKNVETHRRKTL 72 Query: 213 QPVERP---RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERK 383 + P R T+ YMTKYERARILGTRALQISMNAPV V+LEGETDPL IAMKEL E+K Sbjct: 73 KEKAIPKEDRTTTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELAEKK 132 Query: 384 IPFTIRRYLPDGSYEDWGVDELIVE 458 IP IRRYLPDGS+EDW V+EL+V+ Sbjct: 133 IPLVIRRYLPDGSFEDWSVEELVVD 157 [102][TOP] >UniRef100_B6K6D2 DNA-directed RNA polymerase I, II and III subunit Rpb6 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K6D2_SCHJY Length = 145 Score = 130 bits (326), Expect = 9e-29 Identities = 74/139 (53%), Positives = 84/139 (60%), Gaps = 10/139 (7%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDD----------LDAEPIETEDKEADQ 215 DD Y EEE + E+ E A D N A + A Sbjct: 7 DDAYGAEGNYMEEEVEDVEVTETAAAGTEDAANRSNVVVSGDVAAAAAAAASSSGTSAKA 66 Query: 216 PVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 395 RRT+ YMTKYERARILGTRALQISMNAPV+V+LEGETDPL+IAMKEL ++KIP Sbjct: 67 ITGADRRTTPYMTKYERARILGTRALQISMNAPVLVDLEGETDPLQIAMKELAQKKIPLL 126 Query: 396 IRRYLPDGSYEDWGVDELI 452 +RRYLPDGSYEDW V ELI Sbjct: 127 VRRYLPDGSYEDWSVSELI 145 [103][TOP] >UniRef100_B6H9E7 Pc16g10310 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6H9E7_PENCW Length = 153 Score = 130 bits (326), Expect = 9e-29 Identities = 74/148 (50%), Positives = 96/148 (64%), Gaps = 19/148 (12%) Frame = +3 Query: 66 DDDYE---DIDMGYEEEPPEPEIEEGAEEED---------PDKQNDDLDAEP-------I 188 DDD E D + G + EPE +EG E ED + +N + +P + Sbjct: 7 DDDVEETYDYEPGEDVFDEEPEEQEGLEGEDGVEGEEYPTTNGENVVVSGDPNAGYAGKV 66 Query: 189 ETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKE 368 + +E P ++ R T+ Y+TKYERAR+LGTRALQISMNAPV+V+LEGETDPL+IAMKE Sbjct: 67 MEQSREKKVPNDQ-RTTTPYLTKYERARVLGTRALQISMNAPVLVDLEGETDPLQIAMKE 125 Query: 369 LRERKIPFTIRRYLPDGSYEDWGVDELI 452 L ++KIP IRRYLPDG YEDW +EL+ Sbjct: 126 LNQKKIPLIIRRYLPDGWYEDWTCEELL 153 [104][TOP] >UniRef100_Q4P6H4 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P6H4_USTMA Length = 215 Score = 129 bits (325), Expect = 1e-28 Identities = 71/131 (54%), Positives = 89/131 (67%), Gaps = 1/131 (0%) Frame = +3 Query: 75 YEDIDMGYE-EEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYM 251 Y+D + Y+ ++ E + ++GA+ + +P + +A+ R T+ YM Sbjct: 13 YDDEEPVYDGDDLGEEQFDDGADGAANGIVHSSAGGDPSTSMAGQANAE----RITTPYM 68 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYED 431 TKYERARILGTRALQISMNAPV+V EGETDPLEIAMKEL +KIP +RRYLPDGSYED Sbjct: 69 TKYERARILGTRALQISMNAPVLVPTEGETDPLEIAMKELAAKKIPLVVRRYLPDGSYED 128 Query: 432 WGVDELIVEDS 464 W V ELIV DS Sbjct: 129 WTVSELIVSDS 139 [105][TOP] >UniRef100_P36595 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Schizosaccharomyces pombe RepID=RPAB2_SCHPO Length = 142 Score = 129 bits (324), Expect = 2e-28 Identities = 74/140 (52%), Positives = 92/140 (65%), Gaps = 13/140 (9%) Frame = +3 Query: 72 DYEDID-MGYEEEPPEPEIEE--GAEEEDPDKQNDDLDAEP---IETEDKEADQPVE--- 224 DYE+ + G + E E++E +E +Q EP + TED + + + Sbjct: 3 DYEEDEAFGMDGAVMEEEVDELEMIDENGQSQQGVSHPGEPSTTVITEDVASSKTAQSGK 62 Query: 225 ----RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 392 R T+ YMTKYERARILGTRALQISMNAPV+V+LEGETDPL+IAMKEL ++KIP Sbjct: 63 AVAKEDRTTTPYMTKYERARILGTRALQISMNAPVLVDLEGETDPLQIAMKELAQKKIPL 122 Query: 393 TIRRYLPDGSYEDWGVDELI 452 +RRYLPDGSYEDW V ELI Sbjct: 123 LVRRYLPDGSYEDWSVAELI 142 [106][TOP] >UniRef100_B6AF51 DNA-directed RNA polymerases I, II, and III subunit RPABC2, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AF51_9CRYT Length = 132 Score = 129 bits (323), Expect = 2e-28 Identities = 72/130 (55%), Positives = 91/130 (70%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKY 248 +D ED D EE E EIE A +E+ + DD+ +K +P E PR T+ Y Sbjct: 12 EDEED-DFVDEEYLEEDEIE--ASDENVEIMTDDV------IHNKYEGKPCEGPRITTPY 62 Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428 MTK+E+ARI+GTRALQISMNAPV + L+GETDPL IA KEL +KIPF IRRYLP+G+YE Sbjct: 63 MTKFEKARIIGTRALQISMNAPVAIPLDGETDPLIIAEKELYAKKIPFIIRRYLPNGNYE 122 Query: 429 DWGVDELIVE 458 DW +DELI++ Sbjct: 123 DWKIDELILD 132 [107][TOP] >UniRef100_Q758N4 AEL279Cp n=1 Tax=Eremothecium gossypii RepID=Q758N4_ASHGO Length = 154 Score = 129 bits (323), Expect = 2e-28 Identities = 65/86 (75%), Positives = 72/86 (83%) Frame = +3 Query: 201 KEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 380 KE P E R T+ YMTKYERARILGTRALQISMNAPV V+LEGETDP+ IAMKEL E+ Sbjct: 69 KEKAIPKEE-RTTTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPMRIAMKELAEK 127 Query: 381 KIPFTIRRYLPDGSYEDWGVDELIVE 458 KIP IRRYLPDGS+EDW V+ELIV+ Sbjct: 128 KIPLVIRRYLPDGSFEDWSVEELIVD 153 [108][TOP] >UniRef100_Q6CWK0 KLLA0B03476p n=1 Tax=Kluyveromyces lactis RepID=Q6CWK0_KLULA Length = 158 Score = 129 bits (323), Expect = 2e-28 Identities = 62/76 (81%), Positives = 68/76 (89%) Frame = +3 Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410 R T+ YMTKYERARILGTRALQISMNAPV V+LEGETDPL IAMKEL E+KIP IRRYL Sbjct: 82 RTTTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELAEKKIPLVIRRYL 141 Query: 411 PDGSYEDWGVDELIVE 458 PDGS+EDW V+ELIV+ Sbjct: 142 PDGSFEDWSVEELIVD 157 [109][TOP] >UniRef100_B4NB83 GK11847 n=1 Tax=Drosophila willistoni RepID=B4NB83_DROWI Length = 132 Score = 128 bits (322), Expect = 3e-28 Identities = 64/131 (48%), Positives = 87/131 (66%), Gaps = 24/131 (18%) Frame = +3 Query: 144 EDPDKQNDDLDAEPIETEDKEADQPVERP------------------------RRTSKYM 251 ++ D NDD+ + + D++ D+ + + R T+KYM Sbjct: 2 DEADFDNDDVGGDDFDDVDEDVDEDINQEEEVDNIEIITPGGTAPGGGVPKSKRITTKYM 61 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYED 431 TKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+++KIP IRR+LPD SYED Sbjct: 62 TKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKIPIIIRRFLPDHSYED 121 Query: 432 WGVDELIVEDS 464 W +DELI+ D+ Sbjct: 122 WSIDELIMVDN 132 [110][TOP] >UniRef100_C9SV68 DNA-directed RNA polymerases I n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SV68_9PEZI Length = 149 Score = 128 bits (321), Expect = 4e-28 Identities = 73/136 (53%), Positives = 95/136 (69%), Gaps = 6/136 (4%) Frame = +3 Query: 63 ADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQN-DDLDAEPIETED-----KEADQPVE 224 A DD E D Y+E P E E ++ E+ + + N D A T++ K+ P + Sbjct: 16 AFDDDEAFD--YDEFPEEDEKKDDEEDGEDNVINAGDPSAAAAATKNSTLSHKDMKIPDD 73 Query: 225 RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 + R T+ YMTKYE+ARILGTRALQISMNAPV+V+LEGETDPL+IA+KELRE+KIP +RR Sbjct: 74 Q-RTTTPYMTKYEKARILGTRALQISMNAPVLVDLEGETDPLQIAIKELREKKIPLIVRR 132 Query: 405 YLPDGSYEDWGVDELI 452 Y+PDG YEDW +EL+ Sbjct: 133 YMPDGYYEDWTCEELL 148 [111][TOP] >UniRef100_C5P0V3 DNA-directed RNA polymerase subunit, putative n=1 Tax=Coccidioides posadasii C735 delta SOWgp RepID=C5P0V3_COCP7 Length = 158 Score = 128 bits (321), Expect = 4e-28 Identities = 71/142 (50%), Positives = 92/142 (64%), Gaps = 15/142 (10%) Frame = +3 Query: 72 DYEDIDMGY-EEEP-----PEPEIEEGA--------EEEDPDKQNDDLDAEPIETEDKEA 209 DYE + Y + EP PE E EEGA + P D A + ++ Sbjct: 17 DYEPPEYDYIDNEPEDYVSPEQEAEEGAYAVLNGDGQPVTPGANGDSAAASKSKVMLQQR 76 Query: 210 DQPVERPRRTSK-YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKI 386 ++ V +RT+ YMTKYERAR+LGTRALQISMNAP++V+LEGETDPL+IA+KEL ++KI Sbjct: 77 EKKVPNDQRTTTPYMTKYERARVLGTRALQISMNAPILVDLEGETDPLQIALKELNQKKI 136 Query: 387 PFTIRRYLPDGSYEDWGVDELI 452 P +RRYLPDG YEDW +EL+ Sbjct: 137 PLIVRRYLPDGWYEDWTCEELL 158 [112][TOP] >UniRef100_C5DUS0 ZYRO0D00880p n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DUS0_ZYGRC Length = 165 Score = 128 bits (321), Expect = 4e-28 Identities = 61/76 (80%), Positives = 68/76 (89%) Frame = +3 Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410 R T+ YMTKYERARILGTRALQISMNAPV V+LEGETDPL IAMKEL E+KIP IRRY+ Sbjct: 89 RTTTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELAEKKIPLVIRRYM 148 Query: 411 PDGSYEDWGVDELIVE 458 PDGS+EDW V+ELIV+ Sbjct: 149 PDGSFEDWSVEELIVD 164 [113][TOP] >UniRef100_A7UVS4 DNA-directed RNA polymerases I n=1 Tax=Neurospora crassa RepID=A7UVS4_NEUCR Length = 160 Score = 128 bits (321), Expect = 4e-28 Identities = 72/151 (47%), Positives = 92/151 (60%), Gaps = 22/151 (14%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPD---KQNDDLDAEPIET-------------- 194 DDD E ID +E P+ E E D D + D++D + Sbjct: 9 DDDREPIDEPAFDEDPDEYYEPEPEPADDDVAGRPGDEVDEAENDNNIVTSGDPNAAANA 68 Query: 195 ----EDKEADQPVERPRR-TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA 359 E D+ + +R T+ YMTKYE+ARILGTRALQISMNAPV+V+LEGETDPL+IA Sbjct: 69 GKGNEKSHKDKKIPNDQRSTTPYMTKYEKARILGTRALQISMNAPVLVDLEGETDPLQIA 128 Query: 360 MKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +KELRE+KIP +RRY+PDG YEDW +EL+ Sbjct: 129 IKELREKKIPLIVRRYMPDGYYEDWTCEELL 159 [114][TOP] >UniRef100_UPI000187EA0E hypothetical protein MPER_09004 n=1 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187EA0E Length = 169 Score = 127 bits (320), Expect = 5e-28 Identities = 72/145 (49%), Positives = 93/145 (64%), Gaps = 16/145 (11%) Frame = +3 Query: 72 DYEDIDMGYEEEPPEPEIEEGAE--EEDPDKQNDDLDAEPIETEDKEADQPVERP----- 230 D + ID GY+ + E ++G E E+ D Q + ++ + E ++P E P Sbjct: 25 DEQFIDEGYDLLARDAEGQQGGEGVEQAGDPQINGVNGVDHDQEMANGEEPQEPPAQASI 84 Query: 231 ---------RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERK 383 R T+ Y+TKYERARILGTRALQISMNAPV+V L+GETD L+IA+KEL +RK Sbjct: 85 LGERQPNKERITTPYLTKYERARILGTRALQISMNAPVLVPLDGETDALQIAIKELSQRK 144 Query: 384 IPFTIRRYLPDGSYEDWGVDELIVE 458 IP IRRYLPDGS+EDW V ELI + Sbjct: 145 IPLIIRRYLPDGSFEDWSVSELITD 169 [115][TOP] >UniRef100_A7SYA5 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SYA5_NEMVE Length = 71 Score = 127 bits (320), Expect = 5e-28 Identities = 61/71 (85%), Positives = 66/71 (92%) Frame = +3 Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428 MTKYERAR+LGTRALQISM APVMVELEGETDPL+IAMKEL+ RKIP IRRYLPDGS+E Sbjct: 1 MTKYERARVLGTRALQISMGAPVMVELEGETDPLQIAMKELKARKIPIIIRRYLPDGSHE 60 Query: 429 DWGVDELIVED 461 DWG+DELIV D Sbjct: 61 DWGIDELIVTD 71 [116][TOP] >UniRef100_Q4WJQ5 DNA-directed RNA polymerase I, II, and III subunit Rpb6 n=1 Tax=Aspergillus fumigatus RepID=Q4WJQ5_ASPFU Length = 161 Score = 127 bits (320), Expect = 5e-28 Identities = 73/149 (48%), Positives = 92/149 (61%), Gaps = 22/149 (14%) Frame = +3 Query: 72 DYEDIDMGYEEEPPE----PEIEEGAEEEDPDKQNDD------------LDAEPIE---- 191 DYE + ++E PE PE EGAE D DD + +P Sbjct: 14 DYEPAEEVFDENEPEDFINPEDLEGAEG-GADGYGDDHYTPAVNGDRIVVSGDPSAGYSG 72 Query: 192 --TEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMK 365 E A + R+T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGETDPL+IA+K Sbjct: 73 KVVEQARAKKIPNEERKTTPYMTKYERARVLGTRALQISMNAPVLVDLEGETDPLQIAIK 132 Query: 366 ELRERKIPFTIRRYLPDGSYEDWGVDELI 452 EL ++KIP +RRYLPDG+YEDW +EL+ Sbjct: 133 ELNQKKIPLIVRRYLPDGTYEDWTCEELL 161 [117][TOP] >UniRef100_B8MH46 DNA-directed RNA polymerase I, II, and III subunit Rpb6 n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MH46_TALSN Length = 162 Score = 127 bits (320), Expect = 5e-28 Identities = 75/164 (45%), Positives = 94/164 (57%), Gaps = 37/164 (22%) Frame = +3 Query: 72 DYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEA-------------- 209 D+E D GY+ + EPE ++ E D L+ E +E E EA Sbjct: 6 DHEAEDTGYDYDGGEPEYDDNEPE-------DFLEPEDVEPEGDEAVHGAEDVYQDAVNG 58 Query: 210 ------------------DQPVERP-----RRTSKYMTKYERARILGTRALQISMNAPVM 320 +QP E+ R T+ YMTKYERAR+LGTRALQISMNAPV+ Sbjct: 59 ERTIISGDPNAGGGRGVMEQPREKKIPNDQRSTTPYMTKYERARVLGTRALQISMNAPVL 118 Query: 321 VELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 V+LEGETDPL+IA+KEL ++KIP IRRYLPDG YEDW +EL+ Sbjct: 119 VDLEGETDPLQIAIKELNQKKIPLIIRRYLPDGYYEDWTCEELL 162 [118][TOP] >UniRef100_B0XP09 DNA-directed RNA polymerase I, II, and III subunit Rpb6 n=1 Tax=Aspergillus fumigatus A1163 RepID=B0XP09_ASPFC Length = 161 Score = 127 bits (320), Expect = 5e-28 Identities = 73/149 (48%), Positives = 92/149 (61%), Gaps = 22/149 (14%) Frame = +3 Query: 72 DYEDIDMGYEEEPPE----PEIEEGAEEEDPDKQNDD------------LDAEPIE---- 191 DYE + ++E PE PE EGAE D DD + +P Sbjct: 14 DYEPAEEVFDENEPEDFINPEDLEGAEG-GADGYGDDHYTPAVNGDRIVVSGDPSAGYLG 72 Query: 192 --TEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMK 365 E A + R+T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGETDPL+IA+K Sbjct: 73 KVVEQARAKKIPNEERKTTPYMTKYERARVLGTRALQISMNAPVLVDLEGETDPLQIAIK 132 Query: 366 ELRERKIPFTIRRYLPDGSYEDWGVDELI 452 EL ++KIP +RRYLPDG+YEDW +EL+ Sbjct: 133 ELNQKKIPLIVRRYLPDGTYEDWTCEELL 161 [119][TOP] >UniRef100_A1CRE9 DNA-directed RNA polymerase I, II, and III subunit Rpb6 n=1 Tax=Aspergillus clavatus RepID=A1CRE9_ASPCL Length = 161 Score = 127 bits (319), Expect = 6e-28 Identities = 72/149 (48%), Positives = 90/149 (60%), Gaps = 22/149 (14%) Frame = +3 Query: 72 DYEDIDMGYEEEPPE----PEIEEGAEEEDPDKQNDDLDAEPIE---------------- 191 DYE + +++ PE PE E AE D DD A + Sbjct: 14 DYEPAEEVFDDHEPEDFINPEDIEAAEG-GADGYGDDSYAPAVNGDRVVVSGDPSAGYSG 72 Query: 192 --TEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMK 365 E A + R+T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGETDPL+IAMK Sbjct: 73 KVVEQARAKKIPNEERKTTPYMTKYERARVLGTRALQISMNAPVLVDLEGETDPLQIAMK 132 Query: 366 ELRERKIPFTIRRYLPDGSYEDWGVDELI 452 EL ++KIP +RRYLPDG+YEDW +EL+ Sbjct: 133 ELNQKKIPLIVRRYLPDGTYEDWTCEELL 161 [120][TOP] >UniRef100_A1D4B1 DNA-directed RNA polymerase I, II, and III subunit Rpb6 n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D4B1_NEOFI Length = 161 Score = 127 bits (318), Expect = 8e-28 Identities = 73/149 (48%), Positives = 92/149 (61%), Gaps = 22/149 (14%) Frame = +3 Query: 72 DYEDIDMGYEEEPPE----PEIEEGAEEEDPDKQNDD------------LDAEPIE---- 191 DYE + ++E PE PE EGAE D DD + +P Sbjct: 14 DYEPAEEVFDENEPEDFINPEDLEGAEG-GADGYADDHYTPAVNGDRIVVSGDPSAGYSG 72 Query: 192 --TEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMK 365 E A + R+T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGETDPL+IA+K Sbjct: 73 KVVEQARAKKIPNEERKTTPYMTKYERARVLGTRALQISMNAPVLVDLEGETDPLQIAIK 132 Query: 366 ELRERKIPFTIRRYLPDGSYEDWGVDELI 452 EL ++KIP +RRYLPDG+YEDW +EL+ Sbjct: 133 ELNQKKIPLIVRRYLPDGTYEDWTCEELL 161 [121][TOP] >UniRef100_Q5D946 SJCHGC05009 protein n=1 Tax=Schistosoma japonicum RepID=Q5D946_SCHJA Length = 135 Score = 126 bits (317), Expect = 1e-27 Identities = 68/133 (51%), Positives = 89/133 (66%), Gaps = 2/133 (1%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQND-DLDAEPIETEDKEADQPVERPRR-TS 242 D+Y ID +E P E+ + + PD D P + + PVE+ +R T+ Sbjct: 3 DEYGGIDDFESDEEPLDEVPDDDLDTKPDGVTYITTDEVPRLSSGQSLAAPVEKSKRITT 62 Query: 243 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 422 Y+TKYERAR+LG RALQ+SM+APVMVEL+GE DPL+IA KELR KIP IRR+LPDGS Sbjct: 63 PYLTKYERARVLGARALQLSMSAPVMVELDGERDPLKIAEKELRANKIPIIIRRFLPDGS 122 Query: 423 YEDWGVDELIVED 461 +EDW +DELI+ + Sbjct: 123 FEDWSLDELILTE 135 [122][TOP] >UniRef100_B3S9T0 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S9T0_TRIAD Length = 95 Score = 126 bits (316), Expect = 1e-27 Identities = 60/77 (77%), Positives = 67/77 (87%) Frame = +3 Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410 R T YMTKYERARILGTRALQISMNAPVMVELEGETDPL+IA+KEL+ KIP +RR+L Sbjct: 18 RTTQPYMTKYERARILGTRALQISMNAPVMVELEGETDPLQIALKELKANKIPMIVRRFL 77 Query: 411 PDGSYEDWGVDELIVED 461 PDGSYEDW +ELIV + Sbjct: 78 PDGSYEDWSCNELIVSE 94 [123][TOP] >UniRef100_B8N1E2 DNA-directed RNA polymerase I, II, and III subunit Rpb6 n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8N1E2_ASPFN Length = 159 Score = 126 bits (316), Expect = 1e-27 Identities = 74/151 (49%), Positives = 93/151 (61%), Gaps = 22/151 (14%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPE-------IE--EGAEEEDPDKQNDDLDAEPIETED------ 200 D+D D D G + + EPE IE EGAE D ++ + + Sbjct: 9 DEDNYDFDAGQDYDDNEPEDFLNPEDIEGVEGAEAYGEDHYTPAVNGDRVVVSGDPSAGY 68 Query: 201 --KEADQPVERP-----RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA 359 K +Q ER R T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGETDPL+IA Sbjct: 69 SGKVMEQVRERKVPNDQRTTTPYMTKYERARVLGTRALQISMNAPVLVDLEGETDPLQIA 128 Query: 360 MKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +KEL ++KIP +RRYLPDG YEDW +EL+ Sbjct: 129 IKELNQKKIPLIVRRYLPDGWYEDWTCEELL 159 [124][TOP] >UniRef100_A4QSN6 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4QSN6_MAGGR Length = 151 Score = 125 bits (315), Expect = 2e-27 Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 16/136 (11%) Frame = +3 Query: 93 GYEEEPP--EPEIEEGAEEEDP-DKQNDDLDAEPIETEDKEA------------DQPVER 227 GY EE + E EE +EE P D D+ DA + + D A D+ + Sbjct: 15 GYHEEAAFDDVEPEEIFDEEVPLDDDEDNEDANVVVSGDPNAAARATGQKLSHKDKKIPN 74 Query: 228 PRRTSK-YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 +RT+ +MTKYE+ARILGTRALQISMNAPV+V+LEGETDPL+IA+KEL E+KIP IRR Sbjct: 75 DKRTTTPFMTKYEKARILGTRALQISMNAPVLVDLEGETDPLQIAIKELAEKKIPLIIRR 134 Query: 405 YLPDGSYEDWGVDELI 452 Y+PDG YEDW +EL+ Sbjct: 135 YMPDGYYEDWTCEELL 150 [125][TOP] >UniRef100_UPI00005A20F9 PREDICTED: similar to DNA directed RNA polymerase II polypeptide F isoform 2 n=1 Tax=Canis lupus familiaris RepID=UPI00005A20F9 Length = 71 Score = 125 bits (314), Expect = 2e-27 Identities = 61/71 (85%), Positives = 65/71 (91%) Frame = +3 Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428 MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYE Sbjct: 1 MTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYE 60 Query: 429 DWGVDELIVED 461 DWGVDELI+ D Sbjct: 61 DWGVDELIITD 71 [126][TOP] >UniRef100_C4QH33 DNA-directed rna polymerase subunit rpb6, putative n=1 Tax=Schistosoma mansoni RepID=C4QH33_SCHMA Length = 134 Score = 124 bits (311), Expect = 5e-27 Identities = 66/132 (50%), Positives = 86/132 (65%), Gaps = 1/132 (0%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRR-TSK 245 D+Y D +E P E+ E + P+ E + PVE+ +R T+ Sbjct: 3 DEYGGADDFESDEEPLDEVPEEDLDTKPEGVTYITADETPRLSGQNMAAPVEKSKRVTTP 62 Query: 246 YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSY 425 Y+TKYERAR+LG RALQ+SM+APVMVEL+GE DPL+IA KELR KIP IRR+LPDGS+ Sbjct: 63 YLTKYERARVLGARALQLSMSAPVMVELDGERDPLKIAEKELRANKIPIIIRRFLPDGSF 122 Query: 426 EDWGVDELIVED 461 EDW +DELI+ + Sbjct: 123 EDWSLDELILTE 134 [127][TOP] >UniRef100_B4QWV0 GD19782 n=1 Tax=Drosophila simulans RepID=B4QWV0_DROSI Length = 131 Score = 124 bits (310), Expect = 7e-27 Identities = 67/135 (49%), Positives = 92/135 (68%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRT 239 M D DY++ D+G ++ +++E +E+ ++ D + E I + R T Sbjct: 1 MDDADYDNDDVGGDDFD---DVDEDVDEDINQEEEAD-NIEIIAPGGAGGGGVPKSKRIT 56 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG 419 +KYMTKYERAR+LGTRALQI+M AP+MVEL+GETDPL+IAMKEL+ +KIP R LPD Sbjct: 57 TKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKPKKIPLIFRPPLPDH 116 Query: 420 SYEDWGVDELIVEDS 464 SYEDW +DELI+ D+ Sbjct: 117 SYEDWSIDELIMVDN 131 [128][TOP] >UniRef100_Q0V6W2 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0V6W2_PHANO Length = 161 Score = 123 bits (308), Expect = 1e-26 Identities = 71/154 (46%), Positives = 95/154 (61%), Gaps = 26/154 (16%) Frame = +3 Query: 69 DDYEDIDMGYEE------EPPEPEIEE-------GAEEEDPDKQNDDL----DAEP---- 185 DDY D GY++ E EP++ + G +++D Q D++ DA Sbjct: 7 DDYGGGDAGYDDGAVEFDEEMEPDVFDDNDDDAAGGQDQDAQDQEDNIVVSGDASAGAAA 66 Query: 186 ----IETEDKEADQPVERPRRTSK-YMTKYERARILGTRALQISMNAPVMVELEGETDPL 350 T + E D+ V RT+ YMTKYERAR+LGTRALQIS NAPV++++EG TDPL Sbjct: 67 KDKVKNTVENEKDKKVAPENRTTTPYMTKYERARVLGTRALQISGNAPVLIDVEGMTDPL 126 Query: 351 EIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +IA KEL+E+KIP +RRYLPDG YEDW +EL+ Sbjct: 127 QIAAKELQEKKIPLVVRRYLPDGFYEDWTCEELL 160 [129][TOP] >UniRef100_C5FTJ3 DNA-directed RNA polymerase I n=1 Tax=Microsporum canis CBS 113480 RepID=C5FTJ3_NANOT Length = 161 Score = 122 bits (307), Expect = 1e-26 Identities = 68/140 (48%), Positives = 91/140 (65%), Gaps = 10/140 (7%) Frame = +3 Query: 63 ADDDYEDI---DMGYEEEPPEPE--IEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVER 227 A+D ++D D E++ E + + + QN D +A + + K Q E+ Sbjct: 22 AEDFFDDTVVDDFAVEDQQEEGYAILNGDGQPATTNGQNSDPNASSGQGQGKTILQQREK 81 Query: 228 P-----RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 392 R T+ YMTKYERAR+LGTRALQISMNAP++V+LEGETDPL+IA+KEL ++KIP Sbjct: 82 KVANDQRTTTPYMTKYERARVLGTRALQISMNAPILVDLEGETDPLQIALKELNQKKIPL 141 Query: 393 TIRRYLPDGSYEDWGVDELI 452 IRRYLPDG YEDW +EL+ Sbjct: 142 IIRRYLPDGWYEDWTCEELL 161 [130][TOP] >UniRef100_Q84Q45 Putative DNA-directed RNA polymerase Iia n=1 Tax=Oryza sativa Japonica Group RepID=Q84Q45_ORYSJ Length = 286 Score = 122 bits (306), Expect = 2e-26 Identities = 69/131 (52%), Positives = 79/131 (60%), Gaps = 28/131 (21%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIE----------------------------EGAEEEDPD 155 MA+DDY D+DMGYE+EPPEPEIE EGAEEE P+ Sbjct: 1 MAEDDYNDMDMGYEDEPPEPEIEVQSCCFVIYFWTLLYQEELCGLFTFSELEGAEEE-PE 59 Query: 156 KQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEG 335 N+D + + ED + RP +TSKYMTKYERARIL TRALQISMNAPVMVELEG Sbjct: 60 NNNEDAVDDVVGAEDDREQEKTARPWKTSKYMTKYERARILSTRALQISMNAPVMVELEG 119 Query: 336 ETDPLEIAMKE 368 T PLE+ E Sbjct: 120 GTYPLEVEALE 130 [131][TOP] >UniRef100_C5GCW3 DNA-directed RNA polymerase I n=2 Tax=Ajellomyces dermatitidis RepID=C5GCW3_AJEDR Length = 162 Score = 122 bits (306), Expect = 2e-26 Identities = 66/152 (43%), Positives = 92/152 (60%), Gaps = 30/152 (19%) Frame = +3 Query: 87 DMGYEEEPPEPEIEEGAEEEDPDKQNDDL---------DAEPIET--------------- 194 D G++ EPPE E + E+ + + + D +P++ Sbjct: 12 DAGFDYEPPEYEYIDNEPEDFVEPEQTEHAEGYAIVNGDGQPVQNGEENIVSGDPNAGAS 71 Query: 195 ------EDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEI 356 + +E P ++ R T+ YMTKYERAR+LGTRALQISMNAP++V+LEGETDPL+I Sbjct: 72 KGKVMLQQREKKVPNDQ-RTTTPYMTKYERARVLGTRALQISMNAPILVDLEGETDPLQI 130 Query: 357 AMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 A+KEL ++KIP +RRYLPDG YEDW +EL+ Sbjct: 131 ALKELAQKKIPLIVRRYLPDGWYEDWTCEELL 162 [132][TOP] >UniRef100_C1GQL4 DNA-directed RNA polymerases I n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GQL4_PARBA Length = 165 Score = 122 bits (306), Expect = 2e-26 Identities = 60/110 (54%), Positives = 78/110 (70%) Frame = +3 Query: 123 IEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQIS 302 I+ G E N + + +E P ++ R T+ YMTKYERAR+LGTRALQIS Sbjct: 57 IQNGTENVASGDPNAGASKGKVMLQQREKKVPNDQ-RTTTPYMTKYERARVLGTRALQIS 115 Query: 303 MNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 MNAP++V+LEGETDPL+IA+KEL ++KIP +RRYLPDG YEDW +EL+ Sbjct: 116 MNAPILVDLEGETDPLQIALKELAQKKIPLIVRRYLPDGWYEDWTCEELL 165 [133][TOP] >UniRef100_C1G9T6 DNA-directed RNA polymerases I n=1 Tax=Paracoccidioides brasiliensis Pb18 RepID=C1G9T6_PARBD Length = 165 Score = 122 bits (306), Expect = 2e-26 Identities = 70/159 (44%), Positives = 90/159 (56%), Gaps = 32/159 (20%) Frame = +3 Query: 72 DYEDID-MGYEEEPPEPE-------------------------------IEEGAEEEDPD 155 D+ED D G++ EPPE E I G E Sbjct: 8 DHEDHDDAGFDYEPPEYEYIDNEPEDYIEPEQAEQGDQGYAIVNGNGQHIHNGNENSASG 67 Query: 156 KQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEG 335 N + + +E P ++ R T+ YMTKYERAR+LGTRALQISMNAP++V+LEG Sbjct: 68 DPNAGASKGKVMLQQREKKVPNDQ-RTTTPYMTKYERARVLGTRALQISMNAPILVDLEG 126 Query: 336 ETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 ETDPL+IA+KEL ++KIP +RRYLPDG YEDW +EL+ Sbjct: 127 ETDPLQIALKELAQKKIPLIVRRYLPDGWYEDWTCEELL 165 [134][TOP] >UniRef100_C0S1F6 DNA-directed RNA polymerases I n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0S1F6_PARBP Length = 165 Score = 122 bits (305), Expect = 3e-26 Identities = 70/159 (44%), Positives = 90/159 (56%), Gaps = 32/159 (20%) Frame = +3 Query: 72 DYEDID-MGYEEEPPEPE-------------------------------IEEGAEEEDPD 155 D+ED D G++ EPPE E I G E Sbjct: 8 DHEDHDDAGFDYEPPEYEYIDNEPEDYIEPEQAEQGDQGYAIVNGNGQHIHNGNENAASG 67 Query: 156 KQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEG 335 N + + +E P ++ R T+ YMTKYERAR+LGTRALQISMNAP++V+LEG Sbjct: 68 DPNAGASKGKVMLQQREKKVPNDQ-RTTTPYMTKYERARVLGTRALQISMNAPILVDLEG 126 Query: 336 ETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 ETDPL+IA+KEL ++KIP +RRYLPDG YEDW +EL+ Sbjct: 127 ETDPLQIALKELAQKKIPLIVRRYLPDGWYEDWTCEELL 165 [135][TOP] >UniRef100_A7EPQ8 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7EPQ8_SCLS1 Length = 165 Score = 122 bits (305), Expect = 3e-26 Identities = 67/162 (41%), Positives = 95/162 (58%), Gaps = 34/162 (20%) Frame = +3 Query: 69 DDYEDIDMGYE-----EEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEA-------- 209 DD D D G+ +EP EP+ + E+ + ++D + T++ + Sbjct: 3 DDEGDYDGGFSPAYDADEPEEPDYDPEGIEDTNNVSTGEVDDVAVSTQNPDQLLTTGERG 62 Query: 210 --------------------DQPVERPRRTSK-YMTKYERARILGTRALQISMNAPVMVE 326 D+ + + +RT+ YMTKYERARILGTRALQISMNAP++V+ Sbjct: 63 VVTSGDLHAANRAKSNIAPKDKKIPKEQRTTTPYMTKYERARILGTRALQISMNAPILVD 122 Query: 327 LEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 EGETDPL+IA+KELR++KIP +RRY+PDG YEDW +EL+ Sbjct: 123 QEGETDPLQIAIKELRDKKIPLIVRRYMPDGWYEDWTCEELL 164 [136][TOP] >UniRef100_B2WBI5 DNA-directed RNA polymerases I n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2WBI5_PYRTR Length = 163 Score = 121 bits (304), Expect = 3e-26 Identities = 67/148 (45%), Positives = 90/148 (60%), Gaps = 17/148 (11%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIE---------------- 191 M DD D D E + + E ++ EDPD + + D + Sbjct: 16 MGDDHAIDFDEEAEPDLMDDEDDQPGGGEDPDNADPNDDNVVVSGDANAAAAAKEASKNT 75 Query: 192 -TEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKE 368 T +K+ P E+ R T+ YMTKYE+AR+LGTRALQIS NAPV++++EG TDPL+IA KE Sbjct: 76 VTSEKDKRVPNEK-RTTTPYMTKYEKARVLGTRALQISGNAPVLIDVEGMTDPLQIAAKE 134 Query: 369 LRERKIPFTIRRYLPDGSYEDWGVDELI 452 L+E+KIP +RRYLPDG YEDW +EL+ Sbjct: 135 LQEKKIPLVVRRYLPDGFYEDWTCEELL 162 [137][TOP] >UniRef100_A6RVU8 DNA-directed RNA polymerases I, II, and III n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6RVU8_BOTFB Length = 163 Score = 121 bits (303), Expect = 4e-26 Identities = 67/160 (41%), Positives = 95/160 (59%), Gaps = 32/160 (20%) Frame = +3 Query: 69 DDYEDIDMGYE---EEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEA---------- 209 DD E+ D G+ +E EPE + E+ + ++D + T++ + Sbjct: 3 DDEENYDGGFSPAYDEAEEPEYDPEGMEDINNVSTGEVDDVAVSTQNPDQLLTTGERGVV 62 Query: 210 ------------------DQPVERPRRTSK-YMTKYERARILGTRALQISMNAPVMVELE 332 D+ + + +RT+ YMTKYERARILGTRALQISMNAP++V+ E Sbjct: 63 TSGDLHAANRAKSNIAPKDKKIPKEQRTTTPYMTKYERARILGTRALQISMNAPILVDQE 122 Query: 333 GETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 GETDPL+IA+KELR++KIP +RRY+PDG YEDW +EL+ Sbjct: 123 GETDPLQIAIKELRDKKIPLIVRRYMPDGWYEDWTCEELL 162 [138][TOP] >UniRef100_A2Q8H6 Contig An01c0150, complete genome n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2Q8H6_ASPNC Length = 160 Score = 120 bits (302), Expect = 6e-26 Identities = 55/74 (74%), Positives = 67/74 (90%) Frame = +3 Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410 R+T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGETDPL+IA+KEL ++KIP +RRYL Sbjct: 87 RQTTPYMTKYERARVLGTRALQISMNAPVLVDLEGETDPLQIAIKELNQKKIPLIVRRYL 146 Query: 411 PDGSYEDWGVDELI 452 PDG YEDW +EL+ Sbjct: 147 PDGWYEDWTCEELL 160 [139][TOP] >UniRef100_Q4Q3B6 DNA-directed RNA polymerase subunit, putative n=1 Tax=Leishmania major RepID=Q4Q3B6_LEIMA Length = 159 Score = 120 bits (301), Expect = 7e-26 Identities = 69/141 (48%), Positives = 92/141 (65%), Gaps = 10/141 (7%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIE---EGAEEEDPD---KQNDDLDAEPIETEDKEADQPVE- 224 +DD +++G + + + + GA+EED + + +D+ A I + + +A + Sbjct: 7 EDDLLSLNLGDDRDEGDSGSDIRHSGADEEDEEGGEQLPEDVAANVILSGNAQAAKGARA 66 Query: 225 ---RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 395 R TS MTKYERAR+LGTRALQISMNAPV V LEGETDPL IA+KELRER+ P Sbjct: 67 RGINERVTSAVMTKYERARVLGTRALQISMNAPVAVALEGETDPLTIAVKELRERRTPLI 126 Query: 396 IRRYLPDGSYEDWGVDELIVE 458 IRR LPD +YEDW V EL+V+ Sbjct: 127 IRRVLPDNTYEDWSVSELLVD 147 [140][TOP] >UniRef100_A4I9P6 DNA-directed RNA polymerase subunit, putative n=1 Tax=Leishmania infantum RepID=A4I9P6_LEIIN Length = 159 Score = 120 bits (300), Expect = 1e-25 Identities = 69/141 (48%), Positives = 92/141 (65%), Gaps = 10/141 (7%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIE---EGAEEEDPD---KQNDDLDAEPIETEDKEADQPVE- 224 +DD +++G + + + + GA+EED + + +D+ A I + + +A + Sbjct: 7 EDDLLSLNLGGDRDEGDSGSDIRHSGADEEDEEGGEQLPEDVAANIILSGNAQAAKGARA 66 Query: 225 ---RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT 395 R TS MTKYERAR+LGTRALQISMNAPV V LEGETDPL IA+KELRER+ P Sbjct: 67 RGINERVTSAVMTKYERARVLGTRALQISMNAPVAVALEGETDPLTIAVKELRERRTPLI 126 Query: 396 IRRYLPDGSYEDWGVDELIVE 458 IRR LPD +YEDW V EL+V+ Sbjct: 127 IRRVLPDNTYEDWSVSELLVD 147 [141][TOP] >UniRef100_A4HAK2 DNA-directed RNA polymerase subunit, putative n=1 Tax=Leishmania braziliensis RepID=A4HAK2_LEIBR Length = 159 Score = 120 bits (300), Expect = 1e-25 Identities = 72/142 (50%), Positives = 87/142 (61%), Gaps = 11/142 (7%) Frame = +3 Query: 66 DDDYEDIDMG--YEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETE---------DKEAD 212 DDD +++G +E +I + +E+ D+ D L E I T K A Sbjct: 7 DDDVLSLNLGDDRDEVNSSSDIHHSSGDEEDDEGGDQLP-EDIATNVVLSGNAQAAKGAR 65 Query: 213 QPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF 392 R TS MTKYERAR+LGTRALQISMNAPV V LEGETDPL IA+KELRER+ P Sbjct: 66 ARGINERVTSAVMTKYERARVLGTRALQISMNAPVAVALEGETDPLTIAIKELRERRTPL 125 Query: 393 TIRRYLPDGSYEDWGVDELIVE 458 IRR LPD +YEDW V EL+V+ Sbjct: 126 IIRRVLPDNTYEDWSVSELLVD 147 [142][TOP] >UniRef100_A8Q970 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q970_MALGO Length = 146 Score = 119 bits (298), Expect = 2e-25 Identities = 67/135 (49%), Positives = 83/135 (61%), Gaps = 5/135 (3%) Frame = +3 Query: 72 DYEDIDMGYEE-EPPEPEIEEGAEEEDPDKQNDD----LDAEPIETEDKEADQPVERPRR 236 DY D + ++ E EP EE +D D D+ A+ + + R Sbjct: 12 DYFDEGVDFDAAEMDEPLNEEAGAGDDEDHFGDNEVVHSSADGNIPMNMDTSGKANSERI 71 Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD 416 T+ YMTKYE+ARILGTRALQISMNAPV+V EGE DPL IA KEL +KIP +RRYLPD Sbjct: 72 TTPYMTKYEKARILGTRALQISMNAPVLVPTEGEMDPLAIAQKELLAKKIPLLVRRYLPD 131 Query: 417 GSYEDWGVDELIVED 461 G++EDW V ELI+ D Sbjct: 132 GTFEDWSVSELIITD 146 [143][TOP] >UniRef100_B0CRA1 Predicted protein (Fragment) n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CRA1_LACBS Length = 86 Score = 118 bits (296), Expect = 3e-25 Identities = 57/76 (75%), Positives = 66/76 (86%) Frame = +3 Query: 225 RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 + R T+ Y+TKYERARILGTRALQISMNAPV+V L+GETD L+IA+KEL +RKIP IRR Sbjct: 11 KDRVTTPYLTKYERARILGTRALQISMNAPVLVPLDGETDALQIAIKELSQRKIPLIIRR 70 Query: 405 YLPDGSYEDWGVDELI 452 YLPDGS+EDW V ELI Sbjct: 71 YLPDGSFEDWSVSELI 86 [144][TOP] >UniRef100_B2AX93 Predicted CDS Pa_7_9740 n=1 Tax=Podospora anserina RepID=B2AX93_PODAN Length = 153 Score = 117 bits (293), Expect = 6e-25 Identities = 65/138 (47%), Positives = 87/138 (63%), Gaps = 29/138 (21%) Frame = +3 Query: 96 YEEEPPEPEIEEGAEEEDPDK-----QNDDLDAEPIE----------------------- 191 + ++ +P +E A EEDPD+ ++D+ D P+ Sbjct: 4 FGDDDRDPIADEPAFEEDPDEYYEPVEDDEADNRPVGDDEDPNQVVNSGDPNAAANHGKG 63 Query: 192 TEDKEADQPVERP-RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKE 368 TE D+ + R+T+ YMTKYE+ARILGTRALQISMNAPV+V+LEGETDPL+IA+KE Sbjct: 64 TEKSHKDKKIPNDQRKTTPYMTKYEKARILGTRALQISMNAPVLVDLEGETDPLQIAIKE 123 Query: 369 LRERKIPFTIRRYLPDGS 422 LRE+KIP +RRY+PDGS Sbjct: 124 LREKKIPLIVRRYMPDGS 141 [145][TOP] >UniRef100_A8JD59 Subunit of DNA-directed RNA polymerase (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JD59_CHLRE Length = 87 Score = 116 bits (290), Expect = 1e-24 Identities = 60/87 (68%), Positives = 71/87 (81%), Gaps = 1/87 (1%) Frame = +3 Query: 159 QNDDLDAEPIETEDKEADQPV-ERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEG 335 Q + + E ++ D +A Q R R T++YMTKYE+AR+LGTRALQISMNAPVMVEL G Sbjct: 1 QEGEENIELLDHADGQAGQGGGPRQRITTRYMTKYEKARVLGTRALQISMNAPVMVELSG 60 Query: 336 ETDPLEIAMKELRERKIPFTIRRYLPD 416 ETDPLEIAMKELRE+K+PFTIRRYLPD Sbjct: 61 ETDPLEIAMKELREKKVPFTIRRYLPD 87 [146][TOP] >UniRef100_UPI000023F027 hypothetical protein FG06683.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023F027 Length = 139 Score = 115 bits (288), Expect = 2e-24 Identities = 63/124 (50%), Positives = 80/124 (64%), Gaps = 6/124 (4%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPV------ER 227 D YED ++ +P + E +E D + D I K D+ + E Sbjct: 16 DAMYEDEEINDYYDPEPADDGENQQENQDDNIINSGDPSAIANAVKGGDRLLKDKKIPES 75 Query: 228 PRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRY 407 R T+ YMTKYERARILGTRALQISMNAPV+V+LEGETDPL+IA+KE+RE+KIP +RRY Sbjct: 76 ERTTTPYMTKYERARILGTRALQISMNAPVLVDLEGETDPLQIAIKEMREKKIPLIVRRY 135 Query: 408 LPDG 419 +PDG Sbjct: 136 MPDG 139 [147][TOP] >UniRef100_B9G101 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9G101_ORYSJ Length = 230 Score = 115 bits (287), Expect = 3e-24 Identities = 69/139 (49%), Positives = 79/139 (56%), Gaps = 36/139 (25%) Frame = +3 Query: 60 MADDDYEDIDMG------------------------YEEEPPEPEIEE------------ 131 MA+DDY D+DMG YE+EPPEPEIEE Sbjct: 1 MAEDDYNDMDMGCCQVCQQSGFIQNVRNYADFWVTRYEDEPPEPEIEEELCGLFTFSELE 60 Query: 132 GAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNA 311 GAEEE P+ N+D + + ED + RP +TSKYMTKYERARIL TRALQISMNA Sbjct: 61 GAEEE-PENNNEDAVDDVVGAEDDREQEKTARPWKTSKYMTKYERARILSTRALQISMNA 119 Query: 312 PVMVELEGETDPLEIAMKE 368 PVMVELEG T PLE+ E Sbjct: 120 PVMVELEGGTYPLEVEALE 138 [148][TOP] >UniRef100_A9BK87 Rpabc6 n=1 Tax=Cryptophyta RepID=A9BK87_9CRYP Length = 137 Score = 115 bits (287), Expect = 3e-24 Identities = 52/76 (68%), Positives = 67/76 (88%) Frame = +3 Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410 R+T ++TKYE+ARILG RALQISM AP+M+E+EGETD L+IA KEL +RKIP T+RRYL Sbjct: 62 RKTLPFLTKYEKARILGARALQISMGAPLMIEIEGETDALDIAAKELLKRKIPITLRRYL 121 Query: 411 PDGSYEDWGVDELIVE 458 P+G++EDW +DELI+E Sbjct: 122 PNGTFEDWDLDELIIE 137 [149][TOP] >UniRef100_C9ZMZ7 DNA-directed RNA polymerase subunit, putative n=1 Tax=Trypanosoma brucei gambiense DAL972 RepID=C9ZMZ7_TRYBG Length = 144 Score = 114 bits (284), Expect = 7e-24 Identities = 68/130 (52%), Positives = 79/130 (60%), Gaps = 10/130 (7%) Frame = +3 Query: 99 EEEPPEPEIEEGAEEED---PDKQNDDLDA-------EPIETEDKEADQPVERPRRTSKY 248 E+E + G E E D + D DA P+ K D +R R T+ Sbjct: 6 EDEVDRLSLSIGDEHESVAQSDDERSDADAGVVVSGPAPVRGSAKRRD---DRDRVTAPV 62 Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428 +TKYERARILGTRALQISMNAPV+V LEGETDPL IA KELRE IP IRR LPD +YE Sbjct: 63 LTKYERARILGTRALQISMNAPVLVALEGETDPLTIAQKELREGVIPLIIRRVLPDNTYE 122 Query: 429 DWGVDELIVE 458 DW + EL V+ Sbjct: 123 DWRICELDVD 132 [150][TOP] >UniRef100_C4M6S1 DNA-directed RNA polymerases I, II, and III 23 kDa, putative n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4M6S1_ENTHI Length = 122 Score = 113 bits (283), Expect = 9e-24 Identities = 62/99 (62%), Positives = 73/99 (73%), Gaps = 1/99 (1%) Frame = +3 Query: 165 DDLDAEP-IETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGET 341 DDL + IE ++ + D R T+++MTKYE+AR+LGTRALQISMNAPV V L G T Sbjct: 29 DDLGVDNYIEEKEIKGDD-----RTTTRFMTKYEKARVLGTRALQISMNAPVFVPLNGMT 83 Query: 342 DPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 D LEIAM EL+ KIPF IRR LP+GSYEDW V ELIVE Sbjct: 84 DALEIAMAELKAGKIPFIIRRRLPNGSYEDWKVSELIVE 122 [151][TOP] >UniRef100_B0EM77 DNA-directed RNA polymerases I, II, and III subunit RPABC2, putative n=1 Tax=Entamoeba dispar SAW760 RepID=B0EM77_ENTDI Length = 122 Score = 112 bits (280), Expect = 2e-23 Identities = 63/119 (52%), Positives = 77/119 (64%), Gaps = 6/119 (5%) Frame = +3 Query: 120 EIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERP------RRTSKYMTKYERARILG 281 E + + D N+DL + + D D +E R T+++MTKYE+AR+LG Sbjct: 6 EADNDSYSMSEDSNNEDLVIDYYD--DLGVDNYIEEKEIKGDDRTTTRFMTKYEKARVLG 63 Query: 282 TRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 TRALQISMNAPV V L G TD LEIAM EL+ KIPF IRR LP+GS+EDW V ELIVE Sbjct: 64 TRALQISMNAPVFVPLNGMTDALEIAMAELKAGKIPFIIRRRLPNGSFEDWKVSELIVE 122 [152][TOP] >UniRef100_Q4D0Y6 DNA-directed RNA polymerase subunit, putative n=1 Tax=Trypanosoma cruzi RepID=Q4D0Y6_TRYCR Length = 144 Score = 112 bits (279), Expect = 3e-23 Identities = 62/131 (47%), Positives = 79/131 (60%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSK 245 D D + + + + EE E + E+ + D + L D + R T+ Sbjct: 5 DGDDDRLSLNFGEEQEESTLRSDDEQSEGDGADVVLSGRAASGSAVRRDG---KDRVTAP 61 Query: 246 YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSY 425 +TKYERARILGTRALQISMNAPV+V LEGETDPL IA KELRE IP +RR LPD +Y Sbjct: 62 VLTKYERARILGTRALQISMNAPVLVALEGETDPLIIAQKELREGVIPLIVRRVLPDNTY 121 Query: 426 EDWGVDELIVE 458 EDW + EL ++ Sbjct: 122 EDWRICELDID 132 [153][TOP] >UniRef100_Q4DDD8 DNA-directed RNA polymerase subunit, putative n=1 Tax=Trypanosoma cruzi RepID=Q4DDD8_TRYCR Length = 144 Score = 111 bits (278), Expect = 3e-23 Identities = 62/131 (47%), Positives = 79/131 (60%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSK 245 D D + + + + EE E + E+ + D + L D + R T+ Sbjct: 5 DGDDDRLSLNFGEEQEESTLRSDDEQSEGDGADVVLSGRAASGTAVRRDG---KDRVTAP 61 Query: 246 YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSY 425 +TKYERARILGTRALQISMNAPV+V LEGETDPL IA KELRE IP +RR LPD +Y Sbjct: 62 VLTKYERARILGTRALQISMNAPVLVALEGETDPLIIAQKELREGVIPLIVRRVLPDNTY 121 Query: 426 EDWGVDELIVE 458 EDW + EL ++ Sbjct: 122 EDWRICELDID 132 [154][TOP] >UniRef100_C8VJX8 DNA-directed RNA polymerase I, II, and III subunit Rpb6 (AFU_orthologue; AFUA_1G05160) n=2 Tax=Emericella nidulans RepID=C8VJX8_EMENI Length = 198 Score = 111 bits (278), Expect = 3e-23 Identities = 68/141 (48%), Positives = 84/141 (59%), Gaps = 17/141 (12%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAE--EE---------------DPDKQNDDLDAEPIET 194 D Y+DI+ P + E EEGAE EE DP+ E Sbjct: 19 DQTYDDIEPEDFLNPEDIEGEEGAEGYEEGYGGAVNGERVVVSGDPNAGYSGKVVEQARA 78 Query: 195 EDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR 374 + DQ R T+ YMTKYERAR+LGTRALQIS+NAPV+V+LEGETDPL+IAMKEL Sbjct: 79 KKIPNDQ-----RTTTPYMTKYERARVLGTRALQISLNAPVLVDLEGETDPLQIAMKELA 133 Query: 375 ERKIPFTIRRYLPDGSYEDWG 437 ++KIP +RRYLPDG+ +G Sbjct: 134 QKKIPLIVRRYLPDGTEAAYG 154 [155][TOP] >UniRef100_C9ZMZ5 DNA-directed RNA polymerase subunit, putative n=3 Tax=Trypanosoma brucei RepID=C9ZMZ5_TRYBG Length = 144 Score = 111 bits (277), Expect = 5e-23 Identities = 59/92 (64%), Positives = 67/92 (72%) Frame = +3 Query: 183 PIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAM 362 P+ K D +R R T+ +TKYERARILGTRALQISMNAPV+V LEGETDPL IA Sbjct: 44 PVRGSAKRRD---DRDRVTAPVLTKYERARILGTRALQISMNAPVLVALEGETDPLTIAQ 100 Query: 363 KELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 KELRE IP IRR LPD +YEDW + EL V+ Sbjct: 101 KELREGVIPLIIRRVLPDNTYEDWRICELDVD 132 [156][TOP] >UniRef100_A7AT24 DNA-directed RNA polymerase subunit I, putative n=1 Tax=Babesia bovis RepID=A7AT24_BABBO Length = 154 Score = 107 bits (268), Expect = 5e-22 Identities = 63/140 (45%), Positives = 86/140 (61%), Gaps = 28/140 (20%) Frame = +3 Query: 123 IEEGAEEEDPDKQNDDLDAEPIE-----TEDKEADQPVERPRR-TSKYMTKYERARILGT 284 I+E A+EE+ + DD D + + T+ E Q VE R TS YMTKYE+ARI+GT Sbjct: 15 IDEFADEEEEYDEFDDYDQQRVADVDIITDPNEYRQRVENAHRITSPYMTKYEKARIIGT 74 Query: 285 RALQISMNAPVMVELE--------------GET--------DPLEIAMKELRERKIPFTI 398 RALQIS+NAP+ + ++ GE+ DPL IA KEL ++ +PF I Sbjct: 75 RALQISLNAPITIPVDASMDTVDEGITMGFGESVDTSAAAIDPLVIAEKELYQKSVPFII 134 Query: 399 RRYLPDGSYEDWGVDELIVE 458 RRYLP+GSYEDW ++ELI++ Sbjct: 135 RRYLPNGSYEDWKIEELIID 154 [157][TOP] >UniRef100_C0NC81 DNA-directed RNA polymerase I n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0NC81_AJECG Length = 159 Score = 107 bits (268), Expect = 5e-22 Identities = 64/161 (39%), Positives = 90/161 (55%), Gaps = 31/161 (19%) Frame = +3 Query: 63 ADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDL----------DAEPIET------ 194 A D E D G++ EPPE E + E+ + + + D +P++ Sbjct: 6 AGDHEEHDDAGFDYEPPEYEYIDNEPEDYVEPEQTEHGENGYAIVNGDGQPVQNGEGDVV 65 Query: 195 ---------------EDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVEL 329 + +E P ++ R T+ YMTKYERAR+LGTRALQISMNAP++V+L Sbjct: 66 SGDPNAGASKGKVMLQQREKKVPNDQ-RTTTPYMTKYERARVLGTRALQISMNAPILVDL 124 Query: 330 EGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 EGETDPL+IA+KEL ++KIP +RR YEDW +EL+ Sbjct: 125 EGETDPLQIALKELAQKKIPLIVRR------YEDWTCEELL 159 [158][TOP] >UniRef100_Q962L7 PV1H14085_P n=1 Tax=Plasmodium vivax RepID=Q962L7_PLAVI Length = 157 Score = 107 bits (266), Expect = 9e-22 Identities = 59/157 (37%), Positives = 92/157 (58%), Gaps = 22/157 (14%) Frame = +3 Query: 54 LTMADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDA------EPIETEDKEADQ 215 ++ A D + + + E++ E +G + +D D +D+D + +++ + +D Sbjct: 1 MSTALDAFNENYLNDEDDFMGDEFGQGVDSDDGDNYENDIDIITENQIKKEKSDYEHSDV 60 Query: 216 PVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGE----------------TDP 347 + R TS Y+TKYE+ARI+GTRALQIS+NAP+ + +E + DP Sbjct: 61 NEDNIRITSPYLTKYEKARIIGTRALQISLNAPLTIPIETQGGEVSNGKNEYDNYLNNDP 120 Query: 348 LEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 L IA KEL + IPF +RRYLP+GSYEDW +DELI++ Sbjct: 121 LVIAEKELHNKSIPFILRRYLPNGSYEDWKLDELIID 157 [159][TOP] >UniRef100_C6HAI4 DNA-directed RNA polymerase I n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HAI4_AJECH Length = 159 Score = 106 bits (265), Expect = 1e-21 Identities = 63/161 (39%), Positives = 90/161 (55%), Gaps = 31/161 (19%) Frame = +3 Query: 63 ADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDL----------DAEPIET------ 194 A D E D G++ EPP+ E + E+ + + + D +P++ Sbjct: 6 AGDHEEHDDAGFDYEPPQYEYIDNEPEDYVEPEQTEHGENGYAIVNGDGQPVQNGEGDVV 65 Query: 195 ---------------EDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVEL 329 + +E P ++ R T+ YMTKYERAR+LGTRALQISMNAP++V+L Sbjct: 66 SGDPNAGASKGKVMLQQREKKVPNDQ-RTTTPYMTKYERARVLGTRALQISMNAPILVDL 124 Query: 330 EGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 EGETDPL+IA+KEL ++KIP +RR YEDW +EL+ Sbjct: 125 EGETDPLQIALKELAQKKIPLIVRR------YEDWTCEELL 159 [160][TOP] >UniRef100_UPI000007B5B4 DNA-directed RNA polymerase subunit I n=1 Tax=Plasmodium falciparum 3D7 RepID=UPI000007B5B4 Length = 163 Score = 106 bits (264), Expect = 1e-21 Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 24/154 (15%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDA---------EPIETEDKEADQPV 221 D + D + +E+ E +G + +D + +D+D + E+ EA++ Sbjct: 12 DGFNDNYLNEDEDFMGDEFGQGIDSDDGENYENDIDIITDHQIKKDNKSDYENSEANE-- 69 Query: 222 ERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETD---------------PLEI 356 + R TS Y+TKYE+ARI+GTRALQISMNAP+ + +E D PL I Sbjct: 70 DNIRITSPYLTKYEKARIIGTRALQISMNAPLTIPIETSNDMINSKNEYDNYLNNDPLVI 129 Query: 357 AMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 A KEL + IPF +RRYLP+GSYEDW +DELI++ Sbjct: 130 AEKELYNKSIPFILRRYLPNGSYEDWRLDELIID 163 [161][TOP] >UniRef100_O77315 DNA-directed RNA polymerase subunit I, putative n=1 Tax=Plasmodium falciparum 3D7 RepID=O77315_PLAF7 Length = 153 Score = 106 bits (264), Expect = 1e-21 Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 24/154 (15%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDA---------EPIETEDKEADQPV 221 D + D + +E+ E +G + +D + +D+D + E+ EA++ Sbjct: 2 DGFNDNYLNEDEDFMGDEFGQGIDSDDGENYENDIDIITDHQIKKDNKSDYENSEANE-- 59 Query: 222 ERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETD---------------PLEI 356 + R TS Y+TKYE+ARI+GTRALQISMNAP+ + +E D PL I Sbjct: 60 DNIRITSPYLTKYEKARIIGTRALQISMNAPLTIPIETSNDMINSKNEYDNYLNNDPLVI 119 Query: 357 AMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 A KEL + IPF +RRYLP+GSYEDW +DELI++ Sbjct: 120 AEKELYNKSIPFILRRYLPNGSYEDWRLDELIID 153 [162][TOP] >UniRef100_A5KB50 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative n=1 Tax=Plasmodium vivax RepID=A5KB50_PLAVI Length = 153 Score = 106 bits (264), Expect = 1e-21 Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 22/152 (14%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDA------EPIETEDKEADQPVERP 230 D + + + E++ E +G + +D D +D+D + +++ + +D + Sbjct: 2 DAFNENYLNDEDDFMGDEFGQGVDSDDGDNYENDIDIITENQIKKEKSDYEHSDVNEDNI 61 Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGE----------------TDPLEIAM 362 R TS Y+TKYE+ARI+GTRALQIS+NAP+ + +E + DPL IA Sbjct: 62 RITSPYLTKYEKARIIGTRALQISLNAPLTIPIETQGGEVSNGKNEYDNYLNNDPLVIAE 121 Query: 363 KELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 KEL + IPF +RRYLP+GSYEDW +DELI++ Sbjct: 122 KELHNKSIPFILRRYLPNGSYEDWKLDELIID 153 [163][TOP] >UniRef100_Q0CUQ1 DNA-directed RNA polymerases I n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CUQ1_ASPTN Length = 163 Score = 106 bits (264), Expect = 1e-21 Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 24/151 (15%) Frame = +3 Query: 72 DYEDIDMGYEEEPPE----PEIEEGAE--------EEDPDKQNDD---LDAEP------- 185 DYE + ++E PE PE EGAE E N D + +P Sbjct: 14 DYEPAEEVFDENEPEDYLNPEDVEGAEGGAENYDGESYAPAVNGDRVVVSGDPNAGYSGR 73 Query: 186 IETEDKEADQPVERPRRTSKYMTKYERARILGTRALQ--ISMNAPVMVELEGETDPLEIA 359 + + +E P ++ R T+ YMTKYERAR+ G L SMNAPV+V+LEGETDPL+IA Sbjct: 74 VMEQTREKKVPNDQ-RTTTPYMTKYERARLFGGFILTGAASMNAPVLVDLEGETDPLQIA 132 Query: 360 MKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 +KEL ++KIP +RRYLPDG YEDW +EL+ Sbjct: 133 IKELNQKKIPLIVRRYLPDGYYEDWTCEELL 163 [164][TOP] >UniRef100_B3L4G7 Dna-directed rna polymerase subunit i, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L4G7_PLAKH Length = 158 Score = 105 bits (263), Expect = 2e-21 Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 22/152 (14%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDA------EPIETEDKEADQPVERP 230 D + + + E++ E +G + +D D +D+D + +++ + +D + Sbjct: 7 DGFNENYLNDEDDFMGDEFGQGVDSDDGDNYENDIDIITENQIKKEKSDYEHSDANEDNI 66 Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGE----------------TDPLEIAM 362 R TS Y+TKYE+ARI+GTRALQIS+NAP+ + +E + DPL IA Sbjct: 67 RITSPYLTKYEKARIIGTRALQISLNAPLTIPIETQGGDVSNGKNEYDNYLNNDPLVIAE 126 Query: 363 KELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 +EL + IPF +RRYLP+GSYEDW +DELI++ Sbjct: 127 RELHNKSIPFILRRYLPNGSYEDWKLDELIID 158 [165][TOP] >UniRef100_Q4XYQ9 DNA-directed RNA polymerase subunit I, putative n=1 Tax=Plasmodium chabaudi RepID=Q4XYQ9_PLACH Length = 156 Score = 105 bits (262), Expect = 2e-21 Identities = 62/158 (39%), Positives = 91/158 (57%), Gaps = 23/158 (14%) Frame = +3 Query: 54 LTMADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDA--------EPIETEDKEA 209 +T A D Y D E++ E +G + ++ + +D+D E + E+ E Sbjct: 1 MTYAVDLYNDNYGNDEDDFMGDEFGQGVDSDEGENYENDIDIIADNQIKKEKYDYENCEG 60 Query: 210 DQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETD--------------- 344 ++ E R TS Y+TKYE+ARI+GTRALQIS+NAP+ + +E + D Sbjct: 61 NE--ENIRITSPYLTKYEKARIIGTRALQISLNAPLTIPIETQNDKSNGKSDYDNYLNND 118 Query: 345 PLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 PL IA +EL + IPF +RRYLP+GSYEDW +DELI++ Sbjct: 119 PLVIAERELYNKSIPFILRRYLPNGSYEDWRLDELIID 156 [166][TOP] >UniRef100_UPI00006CFA18 RNA polymerases K / 14 to 18 kDa subunit family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CFA18 Length = 163 Score = 105 bits (261), Expect = 3e-21 Identities = 59/143 (41%), Positives = 83/143 (58%), Gaps = 12/143 (8%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQN-----------DDLDAEPIETEDKEADQ 215 DD +D D EE +EG +D D D+ E + +D++ DQ Sbjct: 22 DDMDDGDQESEEASSRSG-DEGDSADDSDHSGTESESQSEVDKDEYPEEMVIIKDQDRDQ 80 Query: 216 PVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEG-ETDPLEIAMKELRERKIPF 392 + + T ++TKYE+ARI+GTRALQI+ N+P+ VE + + DP+ IA KE ++KIPF Sbjct: 81 QASKTKVTPPFLTKYEKARIIGTRALQIAQNSPIYVETDDKDYDPIAIAEKEFVQKKIPF 140 Query: 393 TIRRYLPDGSYEDWGVDELIVED 461 IRRYLP+ YEDW +DEL V D Sbjct: 141 IIRRYLPNKEYEDWALDELEVLD 163 [167][TOP] >UniRef100_Q86EM4 Clone ZZD193 mRNA sequence n=1 Tax=Schistosoma japonicum RepID=Q86EM4_SCHJA Length = 123 Score = 105 bits (261), Expect = 3e-21 Identities = 59/121 (48%), Positives = 77/121 (63%), Gaps = 2/121 (1%) Frame = +3 Query: 69 DDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQND-DLDAEPIETEDKEADQPVERPRR-TS 242 D+Y ID +E P E+ + + PD D P + + PVE+ +R T+ Sbjct: 3 DEYGGIDDFESDEEPLDEVPDDDLDTKPDGVTYITTDEVPRLSSGQSLAAPVEKSKRITT 62 Query: 243 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS 422 Y+TKYERAR+LG RALQ+SM+APVMVEL+GE DPL+IA KELR KIP IRR+LPD Sbjct: 63 PYLTKYERARVLGARALQLSMSAPVMVELDGERDPLKIAEKELRANKIPIIIRRFLPDWE 122 Query: 423 Y 425 + Sbjct: 123 F 123 [168][TOP] >UniRef100_A0CLZ3 Chromosome undetermined scaffold_21, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0CLZ3_PARTE Length = 156 Score = 103 bits (258), Expect = 7e-21 Identities = 50/121 (41%), Positives = 79/121 (65%), Gaps = 4/121 (3%) Frame = +3 Query: 99 EEEPPEPEIEEGAEEEDPDKQNDDLDAEPIET----EDKEADQPVERPRRTSKYMTKYER 266 ++E + +G E D +D+ + + I T + + + ++ R T ++TKYER Sbjct: 32 QDEEMDTSQSKGQESVTSDSSDDEDENQIIRTGAMIQQSKGRKVLKNERITPPFLTKYER 91 Query: 267 ARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDE 446 AR++GTRALQIS N+P+ V+ + TDP+++A +EL E KIPF IRRYLP+G++EDW + E Sbjct: 92 ARVIGTRALQISKNSPIYVDPKETTDPIQVAQQELNENKIPFIIRRYLPNGNFEDWELQE 151 Query: 447 L 449 L Sbjct: 152 L 152 [169][TOP] >UniRef100_C7YNT4 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YNT4_NECH7 Length = 161 Score = 103 bits (257), Expect = 9e-21 Identities = 66/158 (41%), Positives = 82/158 (51%), Gaps = 31/158 (19%) Frame = +3 Query: 72 DYEDIDMG--------YEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPV-- 221 D+ D D+G YE+E + EED D +N D E ++ D Sbjct: 3 DFGDDDVGGAGGDEPMYEDEEVTEYYDPEVVEEDEDGENRPQDGEDMDNVVVSGDPSAAA 62 Query: 222 ----------------ERPRRTSKYMTKYERARILGTRALQISM-----NAPVMVELEGE 338 E R T+ YMTKYERARILGTRALQI +A L GE Sbjct: 63 NALKGGEKLLKDKKIPEGERTTTPYMTKYERARILGTRALQIRFAFLERDASRPGWLTGE 122 Query: 339 TDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 TDPL+IA+KE+RE+KIP +RRYLPDG YEDW +EL+ Sbjct: 123 TDPLQIAIKEMREKKIPLIVRRYLPDGYYEDWTCEELL 160 [170][TOP] >UniRef100_Q4U9K3 RNA polymerase common subunit (Rpb6 homologue), putative n=1 Tax=Theileria annulata RepID=Q4U9K3_THEAN Length = 153 Score = 103 bits (256), Expect = 1e-20 Identities = 58/139 (41%), Positives = 82/139 (58%), Gaps = 27/139 (19%) Frame = +3 Query: 123 IEEGAEEEDPDKQNDDLDAEPIE-----TEDKEADQPVERPRR-TSKYMTKYERARILGT 284 I+E AEEE+ ++ D + T+ E V+ R TS Y+TKYE+ARI+GT Sbjct: 15 IDEFAEEEEDFADFEEYDQRRVSDVDIITDPTEFKTQVDSAHRITSPYLTKYEKARIIGT 74 Query: 285 RALQISMNAPVMVELEGET---------------------DPLEIAMKELRERKIPFTIR 401 RALQIS+NAP+ + ++G + DPL IA KEL ++ +PF +R Sbjct: 75 RALQISLNAPITIPIDGPSEANDDGFTTLGDFGDTQTTAIDPLIIAEKELYQKTVPFIVR 134 Query: 402 RYLPDGSYEDWGVDELIVE 458 RYLP+GSYEDW +DELI++ Sbjct: 135 RYLPNGSYEDWKIDELIID 153 [171][TOP] >UniRef100_A6R5F6 DNA-directed RNA polymerases I n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6R5F6_AJECN Length = 177 Score = 103 bits (256), Expect = 1e-20 Identities = 63/173 (36%), Positives = 90/173 (52%), Gaps = 43/173 (24%) Frame = +3 Query: 63 ADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDL----------DAEPIET------ 194 A D E D G++ EPPE E + E+ + + + D +P++ Sbjct: 6 AGDHEEHDDAGFDYEPPEYEYIDNEPEDYVEPEQTEHGENGYAIVNGDGQPVQNGEGDVV 65 Query: 195 ---------------EDKEADQPVERPRRTSKYMTKYERARILGTRALQI---------- 299 + +E P ++ R T+ YMTKYERAR+ T +L Sbjct: 66 SGDPNAGASKGKVMLQQREKKVPNDQ-RTTTPYMTKYERARVFHTISLSAWRIVSSVLTR 124 Query: 300 --SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELI 452 SMNAP++V+LEGETDPL+IA+KEL ++KIP +RRYLPDG YEDW +EL+ Sbjct: 125 VDSMNAPILVDLEGETDPLQIALKELAQKKIPLIVRRYLPDGWYEDWTCEELL 177 [172][TOP] >UniRef100_Q7RPV3 Plasmodium vivax PV1H14085_P n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RPV3_PLAYO Length = 137 Score = 100 bits (249), Expect = 8e-20 Identities = 55/136 (40%), Positives = 82/136 (60%), Gaps = 23/136 (16%) Frame = +3 Query: 120 EIEEGAEEEDPDKQNDDLDA--------EPIETEDKEADQPVERPRRTSKYMTKYERARI 275 E +G + ++ + +D+D + + E+ E ++ E R TS Y+TKYE+ARI Sbjct: 4 EFGQGVDSDEGENYENDIDIIADNQIKKDKYDYENCEGNE--ENIRITSPYLTKYEKARI 61 Query: 276 LGTRALQISMNAPVMVELEGETD---------------PLEIAMKELRERKIPFTIRRYL 410 +GTRALQIS+NAP+ + +E + D PL IA +EL + IPF +RRYL Sbjct: 62 IGTRALQISLNAPLTIPIETQNDKSNGKSDYDNYLNNDPLVIAERELYNKSIPFILRRYL 121 Query: 411 PDGSYEDWGVDELIVE 458 P+GSYEDW +DELI++ Sbjct: 122 PNGSYEDWRLDELIID 137 [173][TOP] >UniRef100_Q98RN6 DNA-DIRECTED RNA POLYMERASES I, II, AND III 15 KD POLYPEPTIDE(RPABC6) n=1 Tax=Guillardia theta RepID=Q98RN6_GUITH Length = 126 Score = 100 bits (248), Expect = 1e-19 Identities = 48/76 (63%), Positives = 59/76 (77%) Frame = +3 Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410 R T +TKYE+ARILG RALQISM AP++ E+ +D L+IA KEL ERKIP TIRRYL Sbjct: 51 RMTLPILTKYEKARILGARALQISMGAPILTEVNTLSDSLDIASKELYERKIPITIRRYL 110 Query: 411 PDGSYEDWGVDELIVE 458 P+G YEDW ++ELI + Sbjct: 111 PNGRYEDWKIEELIFD 126 [174][TOP] >UniRef100_A8N2F4 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8N2F4_COPC7 Length = 151 Score = 98.6 bits (244), Expect = 3e-19 Identities = 55/109 (50%), Positives = 69/109 (63%) Frame = +3 Query: 132 GAEEEDPDKQNDDLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNA 311 GA E D D++ + DA P + QP + R T+ Y+TKYERARIL Sbjct: 56 GANEGDQDQEMANGDAAPAAAPTQAERQP-NKVRVTTPYLTKYERARIL----------- 103 Query: 312 PVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 V+V L+GETD L+IA+KEL +RKIP IRRYLPDGS+EDW V ELI + Sbjct: 104 -VLVPLDGETDALQIAIKELSQRKIPLIIRRYLPDGSFEDWSVSELITD 151 [175][TOP] >UniRef100_A0CFC7 Chromosome undetermined scaffold_175, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0CFC7_PARTE Length = 156 Score = 98.2 bits (243), Expect = 4e-19 Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 12/140 (8%) Frame = +3 Query: 66 DDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKE---ADQPVERPRR 236 DD+ + +G EE EPE+ + K+ + +E E+++ + P+ + R Sbjct: 15 DDNSQSHSIGGEEL--EPEVSGITSSDVDSKERQSVTSESDSEEEQQIVRSGAPLSQSRG 72 Query: 237 ---------TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIP 389 T ++TKYERAR++GTRALQIS N+P+ V+ + TDP+ +A +EL E KIP Sbjct: 73 KKVNKDERITPPFLTKYERARVIGTRALQISKNSPIYVDPKETTDPILVAQQELNENKIP 132 Query: 390 FTIRRYLPDGSYEDWGVDEL 449 F IRRY P+G++EDW + EL Sbjct: 133 FIIRRYWPNGNFEDWELQEL 152 [176][TOP] >UniRef100_Q4N107 Putative uncharacterized protein n=1 Tax=Theileria parva RepID=Q4N107_THEPA Length = 391 Score = 97.8 bits (242), Expect = 5e-19 Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 21/97 (21%) Frame = +3 Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELEGET---------------------DP 347 R TS Y+TKYE+ARI+GTRALQIS+NAP+ + ++G + DP Sbjct: 295 RITSPYLTKYEKARIIGTRALQISLNAPITIPIDGPSEATDDGFTTLGDFGDTQTTAIDP 354 Query: 348 LEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 L IA KEL ++ +PF +RRYLP+GSYEDW +DELI++ Sbjct: 355 LIIAEKELYQKTVPFIVRRYLPNGSYEDWKIDELIID 391 [177][TOP] >UniRef100_Q8SRE9 DNA-DIRECTED RNA POLYMERASE I n=1 Tax=Encephalitozoon cuniculi RepID=Q8SRE9_ENCCU Length = 144 Score = 95.1 bits (235), Expect = 3e-18 Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 4/110 (3%) Frame = +3 Query: 138 EEEDPDKQND----DLDAEPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISM 305 ++ED D N+ +++ E +E D R+T MTKYE+A ++G RA Q+S Sbjct: 30 DKEDVDSVNEYSTEEINMEVLEISDAGMKIKASE-RKTLPRMTKYEKAHVIGVRATQLSA 88 Query: 306 NAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIV 455 AP V++ ET+PL IA EL E+KIPF IRR LPD S+EDW VDEL++ Sbjct: 89 GAPPFVDIGNETNPLNIANMELSEKKIPFIIRRKLPDSSFEDWAVDELMI 138 [178][TOP] >UniRef100_A2E3F1 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative n=1 Tax=Trichomonas vaginalis G3 RepID=A2E3F1_TRIVA Length = 94 Score = 94.4 bits (233), Expect = 6e-18 Identities = 43/77 (55%), Positives = 60/77 (77%) Frame = +3 Query: 225 RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 +P T++Y+TKYE+AR+LG RA+QI+ APV +++ E DPL IA +EL+++K P IRR Sbjct: 11 KPVNTTEYLTKYEKARVLGIRAMQIANGAPVQIDIGSEVDPLNIAEEELKQKKTPLIIRR 70 Query: 405 YLPDGSYEDWGVDELIV 455 LPDG+YED V+ELIV Sbjct: 71 TLPDGTYEDVAVNELIV 87 [179][TOP] >UniRef100_A2DSU3 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative n=1 Tax=Trichomonas vaginalis G3 RepID=A2DSU3_TRIVA Length = 94 Score = 94.4 bits (233), Expect = 6e-18 Identities = 43/77 (55%), Positives = 60/77 (77%) Frame = +3 Query: 225 RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 +P T++Y+TKYE+AR+LG RA+QI+ APV +++ E DPL IA +EL+++K P IRR Sbjct: 11 KPINTTEYLTKYEKARVLGIRAMQIANGAPVQIDIGSEVDPLNIAEEELKQKKTPLIIRR 70 Query: 405 YLPDGSYEDWGVDELIV 455 LPDG+YED V+ELIV Sbjct: 71 TLPDGTYEDVAVNELIV 87 [180][TOP] >UniRef100_B6QNS4 DNA-directed RNA polymerase I, II, and III subunit Rpb6 n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QNS4_PENMQ Length = 141 Score = 93.6 bits (231), Expect = 1e-17 Identities = 60/134 (44%), Positives = 77/134 (57%), Gaps = 30/134 (22%) Frame = +3 Query: 72 DYEDIDMGYEEEPPEPEIEEGAEE-----EDPDKQNDDLDA-------------EPIETE 197 D+E D GY+ + EPE ++ E ED D + D A I + Sbjct: 6 DHEAEDGGYDYDAGEPEYDDNEPEDFLEPEDVDVEGDQAAAAAEDVYQGAVNGERTIISG 65 Query: 198 DKEA-------DQPVERP-----RRTSKYMTKYERARILGTRALQISMNAPVMVELEGET 341 D A +QP E+ R T+ YMTKYERAR+LGTRALQISMNAPV+V+LEGET Sbjct: 66 DPNAGGGRGVMEQPREKKIPNDQRSTTPYMTKYERARVLGTRALQISMNAPVLVDLEGET 125 Query: 342 DPLEIAMKELRERK 383 DPL+IA+KEL ++K Sbjct: 126 DPLQIALKELNQKK 139 [181][TOP] >UniRef100_A2FZ94 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide, putative n=1 Tax=Trichomonas vaginalis G3 RepID=A2FZ94_TRIVA Length = 85 Score = 89.0 bits (219), Expect = 2e-16 Identities = 43/77 (55%), Positives = 55/77 (71%) Frame = +3 Query: 225 RPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 RPR T+ Y+TKYERAR+LGTR +QIS+ APV ++ TDP+ IA KEL ++P IRR Sbjct: 9 RPRITTPYLTKYERARVLGTRGMQISLGAPVTIDAGDLTDPIAIAEKELEAGQLPLIIRR 68 Query: 405 YLPDGSYEDWGVDELIV 455 YLP+ YED V LI+ Sbjct: 69 YLPNHEYEDVAVKYLII 85 [182][TOP] >UniRef100_UPI000194E6EC PREDICTED: polymerase (RNA) II (DNA directed) polypeptide F, partial n=1 Tax=Taeniopygia guttata RepID=UPI000194E6EC Length = 101 Score = 88.2 bits (217), Expect = 4e-16 Identities = 56/109 (51%), Positives = 66/109 (60%) Frame = +3 Query: 48 LPLTMADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLDAEPIETEDKEADQPVER 227 L L + DD++D+ EE E E AEEE E +E Q + Sbjct: 7 LSLQLDVDDFDDV-----EEDEGLEDLENAEEEGQ---------ENVEILPSGERQQANQ 52 Query: 228 PRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR 374 R T+ YMTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ Sbjct: 53 KRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELK 101 [183][TOP] >UniRef100_C9JK43 Putative uncharacterized protein POLR2F n=1 Tax=Homo sapiens RepID=C9JK43_HUMAN Length = 158 Score = 87.4 bits (215), Expect = 7e-16 Identities = 51/96 (53%), Positives = 63/96 (65%), Gaps = 11/96 (11%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272 E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 380 +LGTRALQI+M APVMVELEGETDPL IAMKEL R Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELNAR 100 [184][TOP] >UniRef100_B0QYL9 Polymerase (RNA) II (DNA directed) polypeptide F n=1 Tax=Homo sapiens RepID=B0QYL9_HUMAN Length = 158 Score = 87.4 bits (215), Expect = 7e-16 Identities = 51/96 (53%), Positives = 63/96 (65%), Gaps = 11/96 (11%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272 E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELRER 380 +LGTRALQI+M APVMVELEGETDPL IAMKEL R Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELNAR 100 [185][TOP] >UniRef100_C1BXG2 DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Esox lucius RepID=C1BXG2_ESOLU Length = 98 Score = 87.0 bits (214), Expect = 9e-16 Identities = 51/96 (53%), Positives = 67/96 (69%), Gaps = 9/96 (9%) Frame = +3 Query: 114 EPEIEEGA-EEEDPDKQNDDLDAEPIETEDKEADQ--------PVERPRRTSKYMTKYER 266 E + ++G ++ + D+ DDL E +E +D+E Q + R T+ YMTKYER Sbjct: 5 EGDFDDGDFDDAEEDEGLDDL--ENVEDDDQENVQILPAGEGSQANQKRITTPYMTKYER 62 Query: 267 ARILGTRALQISMNAPVMVELEGETDPLEIAMKELR 374 AR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ Sbjct: 63 ARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELK 98 [186][TOP] >UniRef100_UPI0000E25B17 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Pan troglodytes RepID=UPI0000E25B17 Length = 126 Score = 86.7 bits (213), Expect = 1e-15 Identities = 50/94 (53%), Positives = 63/94 (67%), Gaps = 11/94 (11%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272 E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELR 374 +LGTRALQI+M APVMVELEGETDPL IAMKEL+ Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELK 98 [187][TOP] >UniRef100_B0QYL8 Polymerase (RNA) II (DNA directed) polypeptide F n=1 Tax=Homo sapiens RepID=B0QYL8_HUMAN Length = 126 Score = 86.7 bits (213), Expect = 1e-15 Identities = 50/94 (53%), Positives = 63/94 (67%), Gaps = 11/94 (11%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272 E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKELR 374 +LGTRALQI+M APVMVELEGETDPL IAMKEL+ Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKELK 98 [188][TOP] >UniRef100_A8BHD7 DNA-directed RNA polymerase II RPB6 n=2 Tax=Giardia intestinalis RepID=A8BHD7_GIALA Length = 104 Score = 86.3 bits (212), Expect = 2e-15 Identities = 46/97 (47%), Positives = 62/97 (63%), Gaps = 3/97 (3%) Frame = +3 Query: 180 EPIETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELE---GETDPL 350 +P ++ K AD R T +Y+TK+E+ARILGTRA Q+SM AP + + G DPL Sbjct: 11 QPFISKIKPADPD---KRITPRYLTKFEQARILGTRAYQLSMGAPAHITITDKGGHLDPL 67 Query: 351 EIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 461 +A +EL IP IRR+LPDG+YEDW + EL + D Sbjct: 68 VLARRELANNAIPIIIRRHLPDGTYEDWKLSELHIID 104 [189][TOP] >UniRef100_B7XI69 DNA-directed RNA polymerase, subunit K/omega n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XI69_ENTBH Length = 75 Score = 86.3 bits (212), Expect = 2e-15 Identities = 38/71 (53%), Positives = 56/71 (78%) Frame = +3 Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYE 428 MT YE+A+I+G RA Q+S +AP +V++ TD +EIA KEL E+K+PF +RR LP+GSYE Sbjct: 1 MTIYEKAKIIGVRATQLSDDAPPLVDIGNLTDCIEIAKKELAEKKLPFIVRRVLPNGSYE 60 Query: 429 DWGVDELIVED 461 DW ++EL++ + Sbjct: 61 DWKIEELLIPE 71 [190][TOP] >UniRef100_C9IYL7 Putative uncharacterized protein POLR2F n=1 Tax=Homo sapiens RepID=C9IYL7_HUMAN Length = 111 Score = 85.9 bits (211), Expect = 2e-15 Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 11/93 (11%) Frame = +3 Query: 126 EEGAEEEDPDKQNDDLDAEPIETEDKEADQPVE------RP-----RRTSKYMTKYERAR 272 E+ + +D D +D + +E ++E + VE RP R T+ YMTKYERAR Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKYERAR 64 Query: 273 ILGTRALQISMNAPVMVELEGETDPLEIAMKEL 371 +LGTRALQI+M APVMVELEGETDPL IAMKEL Sbjct: 65 VLGTRALQIAMCAPVMVELEGETDPLLIAMKEL 97 [191][TOP] >UniRef100_Q3LW93 DNA-directed RNA polymerase I, II and III n=1 Tax=Bigelowiella natans RepID=Q3LW93_BIGNA Length = 115 Score = 85.5 bits (210), Expect = 3e-15 Identities = 49/111 (44%), Positives = 68/111 (61%), Gaps = 11/111 (9%) Frame = +3 Query: 150 PDKQNDDLDAEPIETEDKEAD-----------QPVERPRRTSKYMTKYERARILGTRALQ 296 P ++N + + + D E++ QP++R + +++K+E+A++LG RA Q Sbjct: 3 PSQKNFNTSLKIFSSSDNESEIKNSIGKNYLRQPIKR--FSYPFISKFEKAKLLGVRAKQ 60 Query: 297 ISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDEL 449 IS P V LEGETDPL IA+KE RE KIP IRRY DGSYED+ V EL Sbjct: 61 ISNGNPPTVPLEGETDPLLIALKEYRENKIPLKIRRYFSDGSYEDFFVWEL 111 [192][TOP] >UniRef100_C6LWY4 DNA-directed RNA polymerase II RPB6 n=1 Tax=Giardia intestinalis ATCC 50581 RepID=C6LWY4_GIALA Length = 104 Score = 85.5 bits (210), Expect = 3e-15 Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 3/80 (3%) Frame = +3 Query: 231 RRTSKYMTKYERARILGTRALQISMNAPVMVELE---GETDPLEIAMKELRERKIPFTIR 401 R T +Y+TK+E+ARILGTRA Q+SM AP + + G DPL +A +EL IP IR Sbjct: 25 RITPRYLTKFEQARILGTRAYQLSMGAPAHITITDKGGHLDPLVLARRELANNAIPIIIR 84 Query: 402 RYLPDGSYEDWGVDELIVED 461 R+LPDG+YEDW + EL + D Sbjct: 85 RHLPDGTYEDWKLSELHIID 104 [193][TOP] >UniRef100_A9A2B7 RNA polymerase Rpb6 n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A2B7_NITMS Length = 182 Score = 73.2 bits (178), Expect = 1e-11 Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 31/165 (18%) Frame = +3 Query: 42 NSLPLTMADDDYEDIDMGYEEEPPEPEIEEGA------------------EEEDPDKQND 167 N+ + +A+D+ + EE EPE+E A E +K+ D Sbjct: 19 NTEVVEVAEDEIQST-----EEIAEPEVETNAGLNKALDTYRKLIEKKVDAEPLTEKEQD 73 Query: 168 DLDAEPIETEDKEADQ------PVERPRRTSKY------MTKYERARILGTRALQISMNA 311 DL+ + E E +E + PVE P +K +T++E+ARI+G RALQ+S+ A Sbjct: 74 DLEKKIKEIESREIVETVEEHDPVEIPCEKNKVTIGPPTLTRFEKARIMGARALQLSLGA 133 Query: 312 PVMVELEGETD-PLEIAMKELRERKIPFTIRRYLPDGSYEDWGVD 443 P + + L+I+M+EL +R IP TIRR LP+G Y++ +D Sbjct: 134 PPFIPIPKTARISLDISMEELEQRVIPITIRRVLPNGDYQNIPID 178 [194][TOP] >UniRef100_B3T8Y5 Putative RNA polymerase Rpb6 n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6C9 RepID=B3T8Y5_9ARCH Length = 168 Score = 72.8 bits (177), Expect = 2e-11 Identities = 43/121 (35%), Positives = 73/121 (60%), Gaps = 13/121 (10%) Frame = +3 Query: 120 EIEEGAEEEDPDKQNDDLDAEPIETEDKEA---DQPVERPRRTSK---------YMTKYE 263 ++ E E+ +K+ ++D E ++E D P ++ TSK +T++E Sbjct: 45 KVRECGREDITEKEIAEIDKECEIIRNREIITKDIPHKKVEITSKDNQILIGPPMLTRFE 104 Query: 264 RARILGTRALQISMNAPVMVEL-EGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGV 440 +ARI+G RALQ+S+ APV +E+ + T LEIAM+EL+++ IP I+R LP+G Y++ + Sbjct: 105 KARIMGARALQLSLGAPVFIEIPKNATTSLEIAMEELKQKVIPIVIKRTLPNGDYQNLPL 164 Query: 441 D 443 D Sbjct: 165 D 165 [195][TOP] >UniRef100_A0RUC3 DNA-directed RNA polymerase, subunit K/omega n=1 Tax=Cenarchaeum symbiosum RepID=A0RUC3_CENSY Length = 155 Score = 67.8 bits (164), Expect = 6e-10 Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 24/148 (16%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEE------------EDPDKQNDDLDAEPIETEDK 203 M+D + +++ + E EPEI+ G + E ++Q ++L+ E +++ Sbjct: 1 MSDANDQELVVEGSEAAGEPEIDIGLSKALESYRRLAEVNELTEEQQEELEVRIKEIQER 60 Query: 204 EADQ--PVERPRRTSK---------YMTKYERARILGTRALQISMNAPVMVELEGET-DP 347 + + V P+ + +T++E+ARI+G RALQ+S+ AP +E+ + Sbjct: 61 DVIEIDTVHEPQELTSDKKILIGPPVLTRFEKARIMGARALQLSLGAPPFIEIPADARTS 120 Query: 348 LEIAMKELRERKIPFTIRRYLPDGSYED 431 L+IAM EL +R IP IRR LP+G Y++ Sbjct: 121 LDIAMGELEKRIIPIVIRRVLPNGDYQN 148 [196][TOP] >UniRef100_Q6W391 Predicted DNA-directed RNA polymerase IIb n=1 Tax=uncultured crenarchaeote DeepAnt-EC39 RepID=Q6W391_9CREN Length = 168 Score = 67.4 bits (163), Expect = 7e-10 Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 13/122 (10%) Frame = +3 Query: 120 EIEEGAEEEDPDKQNDDLDAEPIETEDKEA---DQPVERPRRTSK---------YMTKYE 263 +I EG +E +KQ ++D E ++E D E TS +T++E Sbjct: 45 KIREGDNKELTEKQIAEIDKECEIIRNREIITKDLQHEVVEITSDGGHVIVGPITLTRFE 104 Query: 264 RARILGTRALQISMNAPVMVEL-EGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGV 440 +ARI+G RALQ+S+ APV VE+ + T L+IAM+EL++R IP I+R LP+ Y++ + Sbjct: 105 KARIMGARALQLSLGAPVFVEIPKNTTTSLQIAMEELKKRVIPIVIKRTLPNQDYQNIPL 164 Query: 441 DE 446 D+ Sbjct: 165 DK 166 [197][TOP] >UniRef100_Q46CK9 DNA-directed RNA polymerase, subunit K n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q46CK9_METBF Length = 60 Score = 65.9 bits (159), Expect = 2e-09 Identities = 30/51 (58%), Positives = 41/51 (80%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 T++ERARI+G RALQI+M APV+VE +G DPL +A+KEL+ IP T++R Sbjct: 7 TRFERARIIGARALQIAMGAPVLVEDDGRLDPLNLAIKELKAGVIPITVKR 57 [198][TOP] >UniRef100_Q8PW42 DNA-directed RNA polymerase subunit K n=1 Tax=Methanosarcina mazei RepID=RPOK_METMA Length = 83 Score = 63.5 bits (153), Expect = 1e-08 Identities = 29/51 (56%), Positives = 41/51 (80%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 T++ERARI+G RALQI+M APV+VE +G DPL +A++EL+ IP T++R Sbjct: 30 TRFERARIVGARALQIAMGAPVLVEDDGRLDPLGVAIEELKAGVIPITVKR 80 [199][TOP] >UniRef100_Q5UQ32 DNA-directed RNA polymerase subunit 6 n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=RPO6_MIMIV Length = 396 Score = 63.2 bits (152), Expect = 1e-08 Identities = 49/174 (28%), Positives = 72/174 (41%), Gaps = 43/174 (24%) Frame = +3 Query: 57 TMADDDYEDID-MGYEEEPPEPEIEEGAEEED---PDKQNDDLDAEPIETED-------- 200 T D+ + ID MG E+P +P +E E ED D N +++ + + ED Sbjct: 86 TDGDEKFNPIDEMGEPEDPDDPSEQEEDEVEDLGSEDVDNVEIEDDAADIEDLDPELVDE 145 Query: 201 ---------------------KEADQPV----------ERPRRTSKYMTKYERARILGTR 287 E D + + R T +T YE RILGTR Sbjct: 146 ARNSKSKQCYMKNLNKDFIALDEDDSGIYSKIEYKKIPDNERETDPILTYYEIVRILGTR 205 Query: 288 ALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDEL 449 A Q + A +++ P ++A EL + F +RR+LP YEDW +DEL Sbjct: 206 AQQFNYGAKPLIKGVEGMHPAKMAFVELTAKMTSFIVRRHLPGKKYEDWRIDEL 259 [200][TOP] >UniRef100_Q9YDJ9 DNA-directed RNA polymerase subunit K n=1 Tax=Aeropyrum pernix RepID=RPOK_AERPE Length = 89 Score = 62.8 bits (151), Expect = 2e-08 Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 2/71 (2%) Frame = +3 Query: 246 YMTKYERARILGTRALQISMNAPVMVELE--GETDPLEIAMKELRERKIPFTIRRYLPDG 419 Y+TKYERARI+G RA Q+S+ AP +V+ E G +PL+IA E+ +P +I RYLP G Sbjct: 7 YLTKYERARIIGVRAFQLSIGAPPLVDPERAGSRNPLDIARYEVDNGILPVSIYRYLPGG 66 Query: 420 SYEDWGVDELI 452 + + L+ Sbjct: 67 GGQSLSLSRLV 77 [201][TOP] >UniRef100_B6TIG7 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B6TIG7_MAIZE Length = 47 Score = 62.4 bits (150), Expect = 2e-08 Identities = 29/39 (74%), Positives = 32/39 (82%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQNDDLD 176 MADDDY +IDMGYE+EPPEPEIEEGAEEE P+ D D Sbjct: 1 MADDDYNEIDMGYEDEPPEPEIEEGAEEE-PENNEDAPD 38 [202][TOP] >UniRef100_B6TDT8 Glycine-rich RNA-binding protein 2 n=1 Tax=Zea mays RepID=B6TDT8_MAIZE Length = 203 Score = 62.0 bits (149), Expect = 3e-08 Identities = 28/36 (77%), Positives = 31/36 (86%) Frame = +3 Query: 60 MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDKQND 167 MADDDY +IDMGYE+EPPEPEIEEGAEEE P+ D Sbjct: 1 MADDDYNEIDMGYEDEPPEPEIEEGAEEE-PENNED 35 [203][TOP] >UniRef100_Q8TT40 DNA-directed RNA polymerase subunit K n=1 Tax=Methanosarcina acetivorans RepID=RPOK_METAC Length = 60 Score = 62.0 bits (149), Expect = 3e-08 Identities = 28/51 (54%), Positives = 40/51 (78%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 T++ERARI+G RALQI+M APV+V+ +G DPL +A+ EL+ IP T++R Sbjct: 7 TRFERARIVGARALQIAMGAPVLVDDDGRLDPLGVAIAELKAEIIPITVKR 57 [204][TOP] >UniRef100_O26148 DNA-directed RNA polymerase subunit K n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=RPOK_METTH Length = 61 Score = 61.6 bits (148), Expect = 4e-08 Identities = 28/55 (50%), Positives = 42/55 (76%) Frame = +3 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 SK +T++ERAR++G RALQISM A +VE++ DP++IA KEL ++ +P +RR Sbjct: 5 SKKLTRFERARLIGARALQISMGARPLVEIKESLDPVDIARKELEKKVMPLDVRR 59 [205][TOP] >UniRef100_Q8TV21 DNA-directed RNA polymerase subunit K/omega n=1 Tax=Methanopyrus kandleri RepID=Q8TV21_METKA Length = 56 Score = 61.2 bits (147), Expect = 5e-08 Identities = 28/52 (53%), Positives = 40/52 (76%) Frame = +3 Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 +T++E ARI+G RALQI+M +PV+VE+EG+ DPLEIA +E E +P + R Sbjct: 4 LTRFEIARIVGARALQIAMGSPVLVEVEGDEDPLEIAKREFDEGVVPVVVIR 55 [206][TOP] >UniRef100_A2BLA4 DNA-directed RNA polymerase subunit K n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BLA4_HYPBU Length = 102 Score = 61.2 bits (147), Expect = 5e-08 Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 5/95 (5%) Frame = +3 Query: 192 TEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEG-----ETDPLEI 356 TE+ ++ R + ++T++ERAR++G RALQISM APV++++E DP+ I Sbjct: 3 TEEYNIEELKARIKIGPPWLTRFERARVIGVRALQISMGAPVLIDVEKLPRHVREDPVLI 62 Query: 357 AMKELRERKIPFTIRRYLPDGSYEDWGVDELIVED 461 A KEL +P TI RY G + + L+V D Sbjct: 63 AKKELEIGVLPMTIVRYTRRGDVQPIPLKWLVVLD 97 [207][TOP] >UniRef100_A3CWI4 DNA-directed RNA polymerase, subunit K n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CWI4_METMJ Length = 55 Score = 60.8 bits (146), Expect = 7e-08 Identities = 30/51 (58%), Positives = 41/51 (80%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 T+YERARI+G RALQISM APV+V+ +T+PLEIA++E + IP T++R Sbjct: 5 TRYERARIIGARALQISMGAPVLVKTP-KTEPLEIALEEYDQDMIPITVKR 54 [208][TOP] >UniRef100_A1RWX0 DNA-directed RNA polymerase subunit K n=1 Tax=Thermofilum pendens Hrk 5 RepID=RPOK_THEPD Length = 81 Score = 60.8 bits (146), Expect = 7e-08 Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%) Frame = +3 Query: 246 YMTKYERARILGTRALQISMNAPVMVELEGE-TDPLEIAMKELRERKIPFTIRRYLPDGS 422 ++T++ERARI+G RALQIS+ APV++++ E +DP+ IA KEL +P + R+ P+G Sbjct: 7 WLTRFERARIIGIRALQISLGAPVLIQVSEELSDPITIAEKELELGLLPIIVVRWTPEGK 66 Query: 423 YED 431 ++ Sbjct: 67 IQE 69 [209][TOP] >UniRef100_O29134 DNA-directed RNA polymerase subunit K n=1 Tax=Archaeoglobus fulgidus RepID=RPOK_ARCFU Length = 75 Score = 60.5 bits (145), Expect = 9e-08 Identities = 28/51 (54%), Positives = 41/51 (80%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 T++E+ARI+G RALQI+M APV++E + +T+PLEIA++E IP T+RR Sbjct: 12 TRFEKARIIGARALQIAMGAPVLIETD-KTEPLEIALEEFNRGVIPITVRR 61 [210][TOP] >UniRef100_C8S9M9 RNA polymerase Rpb6 n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S9M9_FERPL Length = 73 Score = 59.7 bits (143), Expect = 2e-07 Identities = 28/51 (54%), Positives = 40/51 (78%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 T++E+ARI+G RALQI+M APV++E + +TDPLEIA +E IP T++R Sbjct: 10 TRFEKARIIGARALQIAMGAPVLIETD-KTDPLEIAKEEFERGVIPITVKR 59 [211][TOP] >UniRef100_Q8ZTF9 DNA-directed RNA polymerase subunit K n=1 Tax=Pyrobaculum aerophilum RepID=RPOK_PYRAE Length = 106 Score = 59.7 bits (143), Expect = 2e-07 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 2/80 (2%) Frame = +3 Query: 186 IETEDKEADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELE--GETDPLEIA 359 I+ DK ++ P R +TKYE ARI+G RALQ++M A +V+++ G DP+ IA Sbjct: 14 IDVVDKAINKREFYPPR----LTKYETARIIGARALQLAMGAQPLVDIQEVGSVDPVLIA 69 Query: 360 MKELRERKIPFTIRRYLPDG 419 M+ELR + F I R +PDG Sbjct: 70 MEELRRGLLDFIIVREMPDG 89 [212][TOP] >UniRef100_Q0W8C8 DNA-directed RNA polymerase, subunit K n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W8C8_UNCMA Length = 88 Score = 59.3 bits (142), Expect = 2e-07 Identities = 26/51 (50%), Positives = 38/51 (74%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 T+YERARI+G RALQISM APV+ + +P+E+A+ EL + +P T+R+ Sbjct: 25 TRYERARIIGARALQISMGAPVLAKNPKTVEPIEVALLELEQGLVPITVRK 75 [213][TOP] >UniRef100_B1Y9L9 RNA polymerase Rpb6 n=1 Tax=Thermoproteus neutrophilus V24Sta RepID=B1Y9L9_THENV Length = 109 Score = 59.3 bits (142), Expect = 2e-07 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 2/70 (2%) Frame = +3 Query: 249 MTKYERARILGTRALQISMNAPVMVELE--GETDPLEIAMKELRERKIPFTIRRYLPDGS 422 +TKYE ARILG RA+Q++M A +V++ G TDP+ IA +EL+ + F I R LPDG Sbjct: 34 LTKYEIARILGARAMQLAMGAQPLVDVRELGTTDPVLIAAEELKRGLLDFIIVRELPDGK 93 Query: 423 YEDWGVDELI 452 E + EL+ Sbjct: 94 TERLRLKELL 103 [214][TOP] >UniRef100_B8GEG0 RNA polymerase Rpb6 n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GEG0_METPE Length = 56 Score = 58.9 bits (141), Expect = 3e-07 Identities = 28/51 (54%), Positives = 40/51 (78%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 T+YERARI+G R+LQISM AP++V ++DPLEIA++E + IP T++R Sbjct: 5 TRYERARIIGARSLQISMGAPILVRTT-KSDPLEIALEEYNQGIIPITVKR 54 [215][TOP] >UniRef100_B5IDF9 RNA polymerases K / 14 to 18 kDa subunit n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IDF9_9EURY Length = 57 Score = 58.9 bits (141), Expect = 3e-07 Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVEL-EGETDPLEIAMKELRERKIPFTIRR 404 T++E+ARI+G RALQISM APV++ L E DPL+IAM E + IP T++R Sbjct: 4 TRFEKARIIGARALQISMGAPVLIHLPEDVADPLDIAMYEFEKGVIPITVKR 55 [216][TOP] >UniRef100_B5IDB0 RNA polymerases K / 14 to 18 kDa subunit n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IDB0_9EURY Length = 57 Score = 58.9 bits (141), Expect = 3e-07 Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVEL-EGETDPLEIAMKELRERKIPFTIRR 404 T++E+ARI+G RALQISM APV++ L E DPL+IAM E + IP T++R Sbjct: 4 TRFEKARIIGARALQISMGAPVLIHLPENIVDPLDIAMYEFEKGVIPITVKR 55 [217][TOP] >UniRef100_Q2FTP3 DNA-directed RNA polymerase, subunit K n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FTP3_METHJ Length = 55 Score = 58.2 bits (139), Expect = 5e-07 Identities = 28/51 (54%), Positives = 37/51 (72%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 T+YE+ARI+G RALQISM AP+++ DPLEIAM+E IP T++R Sbjct: 5 TRYEKARIVGARALQISMGAPILI-ATSSIDPLEIAMEEFDREVIPITVKR 54 [218][TOP] >UniRef100_A2SSV2 DNA-directed RNA polymerase subunit K n=1 Tax=Methanocorpusculum labreanum Z RepID=RPOK_METLZ Length = 62 Score = 58.2 bits (139), Expect = 5e-07 Identities = 28/51 (54%), Positives = 40/51 (78%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 T+YERARI+G RALQISM APV+V+ + DPL+IA++E ++P T++R Sbjct: 4 TRYERARIVGARALQISMGAPVLVKTV-KIDPLDIALEEFDADRVPITVKR 53 [219][TOP] >UniRef100_A5UN60 DNA-directed RNA polymerase, subunit K, RpoK n=2 Tax=Methanobrevibacter smithii RepID=A5UN60_METS3 Length = 65 Score = 57.8 bits (138), Expect = 6e-07 Identities = 26/57 (45%), Positives = 41/57 (71%) Frame = +3 Query: 237 TSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRY 407 T++ +T++ERAR+LG RA+QISM A +VE+ DP++IA +EL+ +P + RY Sbjct: 7 TTENLTRFERARLLGARAIQISMGAKPLVEIGDSLDPIDIAYEELKAGVLPLDVIRY 63 [220][TOP] >UniRef100_Q6L1M4 DNA-directed RNA polymerase subunit K n=1 Tax=Picrophilus torridus RepID=RPOK_PICTO Length = 60 Score = 57.8 bits (138), Expect = 6e-07 Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 1/53 (1%) Frame = +3 Query: 249 MTKYERARILGTRALQISMNAPVMVELEGE-TDPLEIAMKELRERKIPFTIRR 404 +TK+E+ARI+G RALQI+M APV++++ + DP++IAM E IP TI+R Sbjct: 6 LTKFEKARIIGARALQIAMGAPVIIDISPDIIDPIDIAMIEFENNVIPITIKR 58 [221][TOP] >UniRef100_A0B6E6 DNA-directed RNA polymerase subunit K n=1 Tax=Methanosaeta thermophila PT RepID=RPOK_METTP Length = 60 Score = 57.4 bits (137), Expect = 8e-07 Identities = 28/51 (54%), Positives = 39/51 (76%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 T++ERARI+G RALQI M APV++ + DPLEIA++E+R IP T++R Sbjct: 7 TRFERARIVGARALQIFMGAPVLIRTD-SIDPLEIALEEMRLGVIPITVKR 56 [222][TOP] >UniRef100_A7IAH0 RNA polymerase Rpb6 n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7IAH0_METB6 Length = 57 Score = 57.0 bits (136), Expect = 1e-06 Identities = 28/51 (54%), Positives = 37/51 (72%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 T+YERARI+G RALQISM AP+++ DPLEIA++E IP T++R Sbjct: 7 TRYERARIIGARALQISMGAPLLIS-TSRIDPLEIAIEEFNADIIPITVKR 56 [223][TOP] >UniRef100_B7XL76 DNA-directed RNA polymerase, subunit K/omega n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XL76_ENTBH Length = 57 Score = 56.2 bits (134), Expect = 2e-06 Identities = 26/50 (52%), Positives = 38/50 (76%) Frame = +3 Query: 249 MTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTI 398 MT YE+A+I+G RA Q+S +AP +V++ TD +EIA KEL E+K+PF + Sbjct: 1 MTIYEKAKIIGVRATQLSDDAPPLVDIGNLTDCIEIAKKELAEKKLPFIV 50 [224][TOP] >UniRef100_A3MX22 DNA-directed RNA polymerase, omega subunit n=1 Tax=Pyrobaculum calidifontis JCM 11548 RepID=A3MX22_PYRCJ Length = 110 Score = 56.2 bits (134), Expect = 2e-06 Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 2/59 (3%) Frame = +3 Query: 249 MTKYERARILGTRALQISMNAPVMVELE--GETDPLEIAMKELRERKIPFTIRRYLPDG 419 +TKYE ARI+G RA Q++M A +V++ G DP+ IAM+ELR+ + F I R LPDG Sbjct: 35 LTKYEIARIIGARATQLAMGAQPLVDVRQLGTIDPVLIAMEELRQGLLDFIIVRELPDG 93 [225][TOP] >UniRef100_P0C9D6 DNA-directed RNA polymerase subunit 6 homolog n=1 Tax=African swine fever virus Malawi LIL 20/1 RepID=RPB6_ASFM2 Length = 151 Score = 56.2 bits (134), Expect = 2e-06 Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 16/146 (10%) Frame = +3 Query: 60 MADDDYEDIDMG-----YEEEPPEPEIEEGAEEEDPDKQNDDLDAEP------IETEDKE 206 MAD+D ED+ M Y E E ++ E ED + D++ P ++ + Sbjct: 1 MADNDNEDVIMDDLVEEYVETEEENFVDSEEESEDKSEDKDEIVESPSICEGFVQASSQT 60 Query: 207 ADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKI 386 + R TS +T +E R++ RA Q+++N M++ + + P++IA +EL RKI Sbjct: 61 LVIIPDNERITSNVLTTFEATRLVAVRAQQLAINGSTMLK-KKYSSPIDIAKQELFNRKI 119 Query: 387 PFTIRRYL---PDGS--YEDWGVDEL 449 P + R + P+G E W E+ Sbjct: 120 PLLVMRCIKVTPEGQKIVEIWNPREM 145 [226][TOP] >UniRef100_UPI0001A48A41 DNA-DIRECTED RNA POLYMERASE RPO6 SUBUNIT n=1 Tax=Sulfolobus shibatae RepID=UPI0001A48A41 Length = 95 Score = 55.8 bits (133), Expect = 2e-06 Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 2/59 (3%) Frame = +3 Query: 249 MTKYERARILGTRALQISMNAPVMVELE--GETDPLEIAMKELRERKIPFTIRRYLPDG 419 +T+YE AR++ RALQ++M AP ++++ TD + IA +E R +P TIRR LP+G Sbjct: 27 LTRYEIARVISARALQLAMGAPALIDINNLSSTDVISIAEEEFRRGVLPITIRRRLPNG 85 [227][TOP] >UniRef100_Q97ZJ9 DNA-directed RNA polymerase subunit K n=2 Tax=Sulfolobus solfataricus RepID=RPOK_SULSO Length = 95 Score = 55.8 bits (133), Expect = 2e-06 Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 2/59 (3%) Frame = +3 Query: 249 MTKYERARILGTRALQISMNAPVMVELE--GETDPLEIAMKELRERKIPFTIRRYLPDG 419 +T+YE AR++ RALQ++M AP ++++ TD + IA +E R +P TIRR LP+G Sbjct: 27 LTRYEIARVISARALQLAMGAPALIDINNLSSTDVISIAEEEFRRGVLPITIRRRLPNG 85 [228][TOP] >UniRef100_P42484 DNA-directed RNA polymerase subunit 6 homolog n=2 Tax=African swine fever virus RepID=RPB6_ASFB7 Length = 147 Score = 55.8 bits (133), Expect = 2e-06 Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 12/142 (8%) Frame = +3 Query: 60 MADDDYEDIDM-GYEEEPPEPEIEEGAEEEDPDKQNDDLDAEP------IETEDKEADQP 218 MAD+D EDI M EE E E E + E+ + D++ P ++ + Sbjct: 1 MADNDNEDIIMDDLVEEYVETEEENFVDSEEESEDKDEIVESPSICEGFVQASSQTLVII 60 Query: 219 VERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTI 398 + R TS +T +E R++ RA Q+++N M++ + + P++IA +EL RKIP + Sbjct: 61 PDNERITSNVLTTFEATRLVAVRAQQLAINGSTMLK-KKYSSPIDIAKQELFNRKIPLLV 119 Query: 399 RRYL---PDGS--YEDWGVDEL 449 R + P+G E W E+ Sbjct: 120 MRCIKVTPEGQKIVEIWNPREM 141 [229][TOP] >UniRef100_B0R4Y7 DNA-directed RNA polymerase subunit K n=2 Tax=Halobacterium salinarum RepID=RPOK_HALS3 Length = 60 Score = 55.5 bits (132), Expect = 3e-06 Identities = 25/55 (45%), Positives = 42/55 (76%) Frame = +3 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRR 404 S++ ++YE+ARI+G RALQ++ APV+V+ + +T+P+ IA +E +PFT+RR Sbjct: 4 SQHFSRYEKARIIGARALQVAYGAPVLVDTD-QTEPILIAAEEYDADALPFTVRR 57 [230][TOP] >UniRef100_Q08399 DNA-directed RNA polymerase subunit 6 homolog n=1 Tax=African swine fever virus Malawi LIL 20/1 RepID=RPO6_ASFM2 Length = 139 Score = 55.5 bits (132), Expect = 3e-06 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 14/134 (10%) Frame = +3 Query: 60 MADDDYEDIDMG-----YEEEPPEPEIEEGAEEEDPDKQNDDLDAEP------IETEDKE 206 MAD+D ED+ M Y E E ++ E ED + D++ P ++ + Sbjct: 1 MADNDNEDVIMDDLVEEYVETEEENFVDSEEESEDKSEDKDEIVESPSICEGFVQASSQT 60 Query: 207 ADQPVERPRRTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKI 386 + R TS +T +E R++ RA Q+++N M++ + + P++IA +EL RKI Sbjct: 61 LVIIPDNERITSNVLTTFEATRLVAVRAQQLAINGSTMLK-KKYSSPIDIAKQELFNRKI 119 Query: 387 PFTIRRYL---PDG 419 P + R + P+G Sbjct: 120 PLLVMRCIKVTPEG 133 [231][TOP] >UniRef100_UPI0000F51709 DNA-directed RNA polymerase subunit K n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI0000F51709 Length = 56 Score = 54.7 bits (130), Expect = 5e-06 Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 1/53 (1%) Frame = +3 Query: 249 MTKYERARILGTRALQISMNAPVMVELEGE-TDPLEIAMKELRERKIPFTIRR 404 +TK+E+ARI+G RALQI+M APV++++ + DP++IA+ E IP TIRR Sbjct: 3 LTKFEKARIIGARALQIAMGAPVILDVSPDMIDPIDIAIFEFDNGVIPITIRR 55 [232][TOP] >UniRef100_B8YB61 RNA polymerase subunit 6 n=1 Tax=Sulfolobus shibatae B12 RepID=B8YB61_SULSH Length = 95 Score = 54.7 bits (130), Expect = 5e-06 Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%) Frame = +3 Query: 249 MTKYERARILGTRALQISMNAPVMVELE--GETDPLEIAMKELRERKIPFTIRRYLPDG 419 +T+YE AR++ RALQ++M AP ++++ TD + IA +E + +P TIRR LP+G Sbjct: 27 LTRYEIARVISARALQLAMGAPALIDINNISSTDVISIAEEEFKRGVLPITIRRRLPNG 85 [233][TOP] >UniRef100_Q9HJ14 DNA-directed RNA polymerase subunit K n=1 Tax=Thermoplasma acidophilum RepID=RPOK_THEAC Length = 61 Score = 54.7 bits (130), Expect = 5e-06 Identities = 26/52 (50%), Positives = 39/52 (75%), Gaps = 1/52 (1%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVEL-EGETDPLEIAMKELRERKIPFTIRR 404 TK+E+ARI+G RALQI+M APV++++ + DP++IAM E IP TI++ Sbjct: 4 TKFEKARIIGARALQIAMGAPVIIDVPKNIIDPVDIAMLEFENNVIPITIKK 55 [234][TOP] >UniRef100_Q2P9V9 RNA polymerase I subunit 1RPB6 n=2 Tax=Trypanosoma brucei RepID=Q2P9V9_TRYBB Length = 131 Score = 54.3 bits (129), Expect = 7e-06 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 20/98 (20%) Frame = +3 Query: 225 RPRRTSKYMTKYERARILGTRALQISMNAPVMVELE--------------------GETD 344 + R++S Y+TKYE ARI+G RA QI V++E + D Sbjct: 26 KDRKSSVYLTKYEVARIIGERARQIVNGTSVLLESQNGCGTGNSLELAEGCADPFAASVD 85 Query: 345 PLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 458 P+ I EL + +IP +RR PDG E+ V+EL V+ Sbjct: 86 PIHITKLELLQGRIPMIVRRTWPDGRTENIPVNELKVD 123 [235][TOP] >UniRef100_A1RRU8 DNA-directed RNA polymerase, subunit K n=1 Tax=Pyrobaculum islandicum DSM 4184 RepID=A1RRU8_PYRIL Length = 109 Score = 54.3 bits (129), Expect = 7e-06 Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%) Frame = +3 Query: 249 MTKYERARILGTRALQISMNAPVMVELE--GETDPLEIAMKELRERKIPFTIRRYLPDG 419 +TKYE ARI+G RALQ++M A +++ G TDP+ IA++E R + F I R PDG Sbjct: 34 LTKYEIARIIGARALQLAMGAQPKIDIRELGTTDPVLIALEEFRRGLLDFIIVREFPDG 92 [236][TOP] >UniRef100_Q2NG01 RpoK n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NG01_METST Length = 63 Score = 53.9 bits (128), Expect = 9e-06 Identities = 26/50 (52%), Positives = 37/50 (74%) Frame = +3 Query: 240 SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIP 389 S+ T++ERAR++G+RALQISM A +VE + DP++IA+KE E IP Sbjct: 3 SRNNTRFERARLIGSRALQISMGANPLVEFTPDQDPIKIAIKEYEEGVIP 52 [237][TOP] >UniRef100_Q12TI3 DNA-directed RNA polymerase subunit K n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12TI3_METBU Length = 63 Score = 53.9 bits (128), Expect = 9e-06 Identities = 26/53 (49%), Positives = 38/53 (71%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYL 410 T+YERARI+G R+LQI+M AP+++E + TD L +A E + IP T++R L Sbjct: 11 TRYERARIIGARSLQIAMGAPILIE-DDNTDALYLATLEFEKGVIPITVKRNL 62 [238][TOP] >UniRef100_P58232 DNA-directed RNA polymerase subunit K n=1 Tax=Thermoplasma volcanium RepID=RPOK_THEVO Length = 61 Score = 53.9 bits (128), Expect = 9e-06 Identities = 26/52 (50%), Positives = 38/52 (73%), Gaps = 1/52 (1%) Frame = +3 Query: 252 TKYERARILGTRALQISMNAPVMVEL-EGETDPLEIAMKELRERKIPFTIRR 404 TK+E+ARI+G RALQI+M APV++++ + DP++IA E IP TI+R Sbjct: 4 TKFEKARIIGARALQIAMGAPVIIDIPKNVIDPVDIATIEFENNVIPITIKR 55