BB918896 ( RCE24689 )

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[1][TOP]
>UniRef100_C6T2I2 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6T2I2_SOYBN
          Length = 107

 Score =  182 bits (461), Expect = 2e-44
 Identities = 86/106 (81%), Positives = 96/106 (90%), Gaps = 3/106 (2%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           MEHGSYTD SKSTFSL+DEDHTFAN+VRFTLNQDPRV+FCGYSIPHPS+NRVN+RVQTTG
Sbjct: 1   MEHGSYTDQSKSTFSLVDEDHTFANAVRFTLNQDPRVSFCGYSIPHPSDNRVNIRVQTTG 60

Query: 297 DPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTS---KTGDHMDI 169
           DP+ EVLKD CQDLMLMCQHVRSTF+KAV+DFK S   K  + MD+
Sbjct: 61  DPSREVLKDACQDLMLMCQHVRSTFDKAVSDFKISKARKNNEDMDV 106

[2][TOP]
>UniRef100_A7NYN7 Chromosome chr6 scaffold_3, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7NYN7_VITVI
          Length = 105

 Score =  169 bits (427), Expect = 2e-40
 Identities = 81/103 (78%), Positives = 88/103 (85%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           MEHGS++D SKSTFSL DEDHT ANS+RFTLNQDPRV FCGYSIPHPS+ RVN+RVQTTG
Sbjct: 1   MEHGSFSDHSKSTFSLSDEDHTLANSIRFTLNQDPRVAFCGYSIPHPSDARVNIRVQTTG 60

Query: 297 DPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSKTGDHMDI 169
           D A EVLKD CQDLMLMCQHVRSTF+KAV D+K SK    M I
Sbjct: 61  DSAREVLKDACQDLMLMCQHVRSTFDKAVVDYKMSKPVKDMSI 103

[3][TOP]
>UniRef100_C5YTE8 Putative uncharacterized protein Sb08g005640 n=1 Tax=Sorghum
           bicolor RepID=C5YTE8_SORBI
          Length = 108

 Score =  161 bits (407), Expect = 4e-38
 Identities = 74/103 (71%), Positives = 86/103 (83%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           MEHGS  D S STFS+M+EDHT ANSVRF LNQDPRV FCGYSIPHP+EN+VN+RVQTTG
Sbjct: 1   MEHGSLDDSSSSTFSIMEEDHTLANSVRFVLNQDPRVAFCGYSIPHPAENKVNIRVQTTG 60

Query: 297 DPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSKTGDHMDI 169
           DPA +VLKD  QDLM+MCQH+R T + AV DF+ +KT + MDI
Sbjct: 61  DPAKDVLKDALQDLMVMCQHIRGTLDTAVADFRGNKTAEAMDI 103

[4][TOP]
>UniRef100_B2BXR4 RNApol24 n=1 Tax=Cleome spinosa RepID=B2BXR4_9ROSI
          Length = 109

 Score =  157 bits (396), Expect = 7e-37
 Identities = 74/103 (71%), Positives = 83/103 (80%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           MEHGS+TD S +TFSL +EDHT AN+VRF LNQDPRVTFCGYSIPHPS  RVN+RVQTTG
Sbjct: 1   MEHGSFTDHSHATFSLTEEDHTLANAVRFVLNQDPRVTFCGYSIPHPSHARVNIRVQTTG 60

Query: 297 DPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSKTGDHMDI 169
           DPA EVLKD CQDLMLM +HVR  F+ AV DFK     + MD+
Sbjct: 61  DPAREVLKDACQDLMLMNRHVRGVFDNAVADFKKGNQTESMDV 103

[5][TOP]
>UniRef100_B9GIX0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GIX0_POPTR
          Length = 102

 Score =  154 bits (390), Expect = 3e-36
 Identities = 70/97 (72%), Positives = 84/97 (86%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           MEHGS  D S +TF  +DEDHT ANSVRF LNQDPRV+FCGYSIPHPS+ +VN+RVQTTG
Sbjct: 1   MEHGSVRDPSSATFCFVDEDHTLANSVRFALNQDPRVSFCGYSIPHPSDAKVNIRVQTTG 60

Query: 297 DPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSKT 187
           DPA EVLKD CQ+LM+MCQHVRST +KAV+D++++ T
Sbjct: 61  DPAREVLKDACQNLMVMCQHVRSTLDKAVDDYRSNPT 97

[6][TOP]
>UniRef100_Q2QWI0 Os12g0194700 protein n=2 Tax=Oryza sativa RepID=Q2QWI0_ORYSJ
          Length = 108

 Score =  152 bits (385), Expect = 1e-35
 Identities = 71/103 (68%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           MEHGS TD + STFS+++EDHT ANSVRF LNQDPRV FCGYSIPHP++N+VN+RVQTTG
Sbjct: 1   MEHGSVTDSTASTFSIVEEDHTLANSVRFVLNQDPRVAFCGYSIPHPADNKVNIRVQTTG 60

Query: 297 DPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFK-TSKTGDHMD 172
           DPA +VLKD  QDLM+MCQHVR TF+ AV  F+  + TG ++D
Sbjct: 61  DPAKDVLKDSLQDLMVMCQHVRGTFDTAVTQFRQNNPTGMNID 103

[7][TOP]
>UniRef100_C5Y1Q7 Putative uncharacterized protein Sb05g008640 n=1 Tax=Sorghum
           bicolor RepID=C5Y1Q7_SORBI
          Length = 107

 Score =  144 bits (363), Expect = 5e-33
 Identities = 68/104 (65%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           MEHGS TD + STFS+M+EDHT ANS RF LNQDPRV FCGYSIPHP+E +VN+RVQTTG
Sbjct: 1   MEHGSLTDSTSSTFSIMEEDHTLANSARFVLNQDPRVAFCGYSIPHPAEKKVNIRVQTTG 60

Query: 297 DPACEVLKDGCQDLMLMCQHVRSTFEKAV-NDFKTSKTGDHMDI 169
           D A +VLKD  Q+LM+MCQHVR T + AV N    + T + MD+
Sbjct: 61  DAAKDVLKDALQNLMIMCQHVRGTLDNAVANHRAKNTTAEQMDV 104

[8][TOP]
>UniRef100_Q42483 DNA-directed RNA polymerase 14 kDa subunit (AtRPAC14) n=1
           Tax=Arabidopsis thaliana RepID=Q42483_ARATH
          Length = 122

 Score =  133 bits (335), Expect = 8e-30
 Identities = 61/93 (65%), Positives = 77/93 (82%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           MEHGS+T++S ++F+L +EDHT AN+VRF LNQDPRVT   Y+IPHPS  +VN+RVQTTG
Sbjct: 1   MEHGSFTNVSHASFTLSEEDHTLANAVRFVLNQDPRVTVAAYTIPHPSLEQVNIRVQTTG 60

Query: 297 DPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFK 199
           DPA EV KD CQ+LM M +HVRS F+KAV ++K
Sbjct: 61  DPAREVFKDACQELMQMNRHVRSVFDKAVAEYK 93

[9][TOP]
>UniRef100_A9NNU7 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NNU7_PICSI
          Length = 107

 Score =  131 bits (330), Expect = 3e-29
 Identities = 62/96 (64%), Positives = 73/96 (76%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           ME GS  +   STF+  DEDHT  NS+R+ LN DPRV FCGYSIPHPS+NRVN+RVQTTG
Sbjct: 1   MELGSVENPRSSTFAFNDEDHTLGNSLRYVLNHDPRVEFCGYSIPHPSDNRVNIRVQTTG 60

Query: 297 DPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
           DPA +VLKD  QDLM++CQ VR TF KAV  F  ++
Sbjct: 61  DPAKDVLKDALQDLMVVCQQVRQTFGKAVVTFNATR 96

[10][TOP]
>UniRef100_A9SFX7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9SFX7_PHYPA
          Length = 118

 Score =  131 bits (329), Expect = 4e-29
 Identities = 62/96 (64%), Positives = 73/96 (76%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           ME GS TD   +TFS+ DEDHT  NS+RF LN+DPRV FCGYS+PHPSE R+NVRVQTTG
Sbjct: 1   MELGSETDPRNATFSISDEDHTLGNSLRFVLNKDPRVAFCGYSVPHPSETRINVRVQTTG 60

Query: 297 DPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
            PA +VLKD   DLM M QHV +TF +AV  FK ++
Sbjct: 61  VPARDVLKDALNDLMAMNQHVSTTFNRAVETFKANQ 96

[11][TOP]
>UniRef100_A8JHU3 RNA polymerase subunit n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8JHU3_CHLRE
          Length = 99

 Score =  103 bits (257), Expect = 9e-21
 Identities = 49/93 (52%), Positives = 66/93 (70%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA 289
           G  TD   +TFS+ +EDHT ANS+RF LN++P V FCGYS+PHPSE  VN+RVQTTG  A
Sbjct: 3   GEATDFFAATFSIEEEDHTLANSLRFFLNKNPHVAFCGYSMPHPSEELVNLRVQTTG-AA 61

Query: 288 CEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
              +K  C+D+  +C H+RST + AV+ F+  +
Sbjct: 62  RGAVKAACEDVSQVCGHMRSTLQDAVHKFQAEE 94

[12][TOP]
>UniRef100_C3YRU6 Putative uncharacterized protein (Fragment) n=2 Tax=Branchiostoma
           floridae RepID=C3YRU6_BRAFL
          Length = 110

 Score =  102 bits (255), Expect = 2e-20
 Identities = 42/90 (46%), Positives = 68/90 (75%)
 Frame = -1

Query: 459 TDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEV 280
           +D S  TF L DEDHT  N++R+ + ++P V FCGYS+PHPSE+++N+R+Q+ G PA ++
Sbjct: 6   SDESCQTFVLHDEDHTLGNALRYMIMKNPDVDFCGYSVPHPSEHKINLRIQSRGPPAADI 65

Query: 279 LKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
           L+ G  +L  +C+HV++TFE AV ++K ++
Sbjct: 66  LRRGLTELNALCEHVQNTFEGAVEEYKMNQ 95

[13][TOP]
>UniRef100_C1E3U1 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E3U1_9CHLO
          Length = 100

 Score = 97.4 bits (241), Expect = 6e-19
 Identities = 44/87 (50%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
 Frame = -1

Query: 447 KSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKD 271
           + TF+L DEDHT  N+VR+ LN++P+V+  GYS+PHP E  VNVRVQTTG+  A   ++D
Sbjct: 5   EKTFTLKDEDHTMGNAVRYMLNKNPQVSLAGYSVPHPMEKSVNVRVQTTGEVTATAAMRD 64

Query: 270 GCQDLMLMCQHVRSTFEKAVNDFKTSK 190
              D++ +C HV  TF+ AV DFK  +
Sbjct: 65  ALLDIISVCDHVHDTFDTAVADFKAKQ 91

[14][TOP]
>UniRef100_UPI000194E32E PREDICTED: similar to DNA-directed RNA polymerases I and III
           subunit RPAC2 n=1 Tax=Taeniopygia guttata
           RepID=UPI000194E32E
          Length = 118

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 45/91 (49%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
 Frame = -1

Query: 459 TDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACE 283
           TD +  TF L DEDHT  NS+R+ + ++P V FCGY I HPSE+++N R+QT G  PA E
Sbjct: 23  TDGNCVTFVLHDEDHTLGNSLRYMVMKNPDVEFCGYCITHPSESKINFRIQTRGALPAVE 82

Query: 282 VLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
             + G  DLM +CQHV +TFE+++ +F+  K
Sbjct: 83  PFRKGLNDLMGVCQHVLNTFERSMKEFRAQK 113

[15][TOP]
>UniRef100_A7SBE9 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis
           RepID=A7SBE9_NEMVE
          Length = 85

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 42/79 (53%), Positives = 57/79 (72%)
 Frame = -1

Query: 456 DLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVL 277
           D S  TF L DEDHT  NS+R+ + ++P V FCGYSIPHPSE+++N+R+QT G PA +VL
Sbjct: 1   DESCMTFVLHDEDHTLGNSLRYIIMKNPDVKFCGYSIPHPSESKINLRIQTHGTPASDVL 60

Query: 276 KDGCQDLMLMCQHVRSTFE 220
           + G  +L  MC+H  + FE
Sbjct: 61  RRGLSELTAMCEHALAAFE 79

[16][TOP]
>UniRef100_UPI0000F2C077 PREDICTED: similar to LOC494863 protein n=1 Tax=Monodelphis
           domestica RepID=UPI0000F2C077
          Length = 134

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 45/97 (46%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           M   + TD +  TF L DEDHT  NS+R+ + ++P V FCGYSI HPSE+++N R+QT G
Sbjct: 33  MVQAAGTDGNCVTFVLYDEDHTLGNSLRYMIMKNPEVEFCGYSITHPSESKINFRIQTKG 92

Query: 297 D-PACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
             PA E  + G  +LM +CQHV + FE ++ ++K  K
Sbjct: 93  GLPAVEPFRQGLNELMDVCQHVLNKFEASIKNYKDQK 129

[17][TOP]
>UniRef100_UPI000180B7C9 PREDICTED: similar to LOC494863 protein n=1 Tax=Ciona intestinalis
           RepID=UPI000180B7C9
          Length = 109

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 39/80 (48%), Positives = 59/80 (73%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF + +EDHT  N++R+ L ++P + FCGYSIPHP+EN++N+R+QT G  A E LK G +
Sbjct: 25  TFIIHNEDHTLGNALRYILMKNPDIEFCGYSIPHPAENKMNLRIQTRGISATEALKKGLK 84

Query: 261 DLMLMCQHVRSTFEKAVNDF 202
           DL  +C+H+  TFE +V ++
Sbjct: 85  DLNSVCEHILKTFESSVKEY 104

[18][TOP]
>UniRef100_UPI0000610BFD PREDICTED: similar to RNA polymerase I 16 kDa subunit n=1
           Tax=Gallus gallus RepID=UPI0000610BFD
          Length = 114

 Score = 93.6 bits (231), Expect = 9e-18
 Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
 Frame = -1

Query: 459 TDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACE 283
           TD +  TF L DEDHT  NS+R+ + ++P V FCGY I HPSE+++N R+QT G  PA E
Sbjct: 19  TDGNCVTFVLHDEDHTLGNSLRYMVMKNPDVEFCGYCITHPSESKINFRIQTRGSLPAVE 78

Query: 282 VLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
             + G  DLM +CQHV  TFEK++  ++  +
Sbjct: 79  PFRKGLNDLMGVCQHVLDTFEKSMRKYRAQR 109

[19][TOP]
>UniRef100_UPI0000E4658A PREDICTED: similar to LOC494863 protein n=1 Tax=Strongylocentrotus
           purpuratus RepID=UPI0000E4658A
          Length = 117

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 38/81 (46%), Positives = 56/81 (69%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF + +EDHT  N++R+ + +DP V FCGYS+PHP+ENR+N R+QT G PA +V   G  
Sbjct: 31  TFVMHNEDHTLGNALRYMVMKDPDVEFCGYSVPHPTENRINFRIQTKGAPAGDVFGKGLA 90

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           +L  +C H++ TF+  +  FK
Sbjct: 91  NLSEVCDHIQQTFKDTIQKFK 111

[20][TOP]
>UniRef100_UPI000155D07A PREDICTED: similar to LOC494863 protein n=1 Tax=Ornithorhynchus
           anatinus RepID=UPI000155D07A
          Length = 149

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           M   + TD +  TF L DEDHT  NS+R+ + ++P V FCGYSI HPSE+++N R+QT G
Sbjct: 13  MVQAAGTDGNCVTFVLHDEDHTLGNSLRYMVMKNPEVEFCGYSITHPSESKINFRIQTRG 72

Query: 297 D-PACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSKTGDHMDI 169
             PA E  + G  +L  +CQHV + FE +V ++K        ++
Sbjct: 73  GLPAVEPFRQGLNELTDVCQHVLNKFEASVKEYKNQMEAQRSEV 116

[21][TOP]
>UniRef100_UPI00006D2CA2 PREDICTED: polymerase (RNA) I polypeptide D, 16kDa n=1 Tax=Macaca
           mulatta RepID=UPI00006D2CA2
          Length = 133

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           M   + TD    TF L +EDHT  NS+R+ + ++P V FCGY+  HPSE+++N+R+QT G
Sbjct: 29  MVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSESKINLRIQTRG 88

Query: 297 D-PACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
             PA E  + G  +LM +CQHV   FE ++ D+K  K
Sbjct: 89  TLPAVEPFQRGLNELMSVCQHVLDKFEASIKDYKDQK 125

[22][TOP]
>UniRef100_C4Y1Z9 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
           42720 RepID=C4Y1Z9_CLAL4
          Length = 154

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 41/88 (46%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-P 292
           GS  D + ++F ++DEDHT  N++R+ + ++P V FCGYSIPHPSEN++N+R+QT G+  
Sbjct: 58  GSSDDGTAASFQVLDEDHTLGNALRYMIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNIT 117

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAVN 208
           A E L  G  +L  +C HV  TF + V+
Sbjct: 118 ALEALHQGLDNLSELCTHVEETFTEKVD 145

[23][TOP]
>UniRef100_Q9Y2S0 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Homo
           sapiens RepID=RPAC2_HUMAN
          Length = 133

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           M   + TD    TF L +EDHT  NS+R+ + ++P V FCGY+  HPSE+++N+R+QT G
Sbjct: 29  MVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSESKINLRIQTRG 88

Query: 297 D-PACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
             PA E  + G  +LM +CQHV   FE ++ D+K  K
Sbjct: 89  TLPAVEPFQRGLNELMNVCQHVLDKFEASIKDYKDQK 125

[24][TOP]
>UniRef100_Q5XK67 DNA-directed RNA polymerases I and III subunit RPAC2 n=1
           Tax=Xenopus laevis RepID=RPAC2_XENLA
          Length = 114

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEVLKDGC 265
           TF L +EDHT  NS+R+ + ++P V FCGYSI HPSE ++N R+QT  G PA E  + G 
Sbjct: 25  TFVLHEEDHTLGNSLRYMVMKNPEVEFCGYSITHPSETKINFRIQTRNGIPAVEPFRRGL 84

Query: 264 QDLMLMCQHVRSTFEKAVNDFKTSK 190
            +L+ +CQHV +TFE ++ ++K  K
Sbjct: 85  NELVDVCQHVLNTFETSIKEYKEQK 109

[25][TOP]
>UniRef100_Q1RMG8 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Bos
           taurus RepID=RPAC2_BOVIN
          Length = 133

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           M   + TD    TF L +EDHT  NS+R+ + ++P V FCGY+  HPSE+++N+R+QT G
Sbjct: 29  MVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSESKINLRIQTRG 88

Query: 297 D-PACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
             PA E  + G  DLM +CQHV   FE ++ ++K  K
Sbjct: 89  ALPAVEPFQRGLTDLMNVCQHVLDKFEASIKEYKDQK 125

[26][TOP]
>UniRef100_C1N3U7 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N3U7_9CHLO
          Length = 109

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 39/82 (47%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
 Frame = -1

Query: 447 KSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKD 271
           + TF+L DEDHT  N++R+ LN++P+V   GYS+PHP E  VNVRVQTTG+  A   ++D
Sbjct: 5   EKTFTLKDEDHTMGNAIRYMLNKNPQVALAGYSVPHPMERSVNVRVQTTGEVTATAAMRD 64

Query: 270 GCQDLMLMCQHVRSTFEKAVND 205
              D++ +C HV  TF+ A+ +
Sbjct: 65  ALLDIISVCDHVHDTFDLAIEE 86

[27][TOP]
>UniRef100_UPI000069FE65 DNA-directed RNA polymerase I subunit D (EC 2.7.7.6) (DNA-directed
           RNA polymerase I 16 kDa polypeptide) (RPA16). n=1
           Tax=Xenopus (Silurana) tropicalis RepID=UPI000069FE65
          Length = 114

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = -1

Query: 456 DLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEV 280
           D S  TF L +EDHT  NS+R+ + ++P + FCGYSI HPSE ++N R+QT  G PA E 
Sbjct: 20  DESCVTFVLHEEDHTLGNSLRYMVMKNPDIEFCGYSITHPSETKINFRIQTRNGIPAVEP 79

Query: 279 LKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
            + G  +L+ +CQHV +TFE ++ ++K  K
Sbjct: 80  FRRGLTELVDVCQHVLNTFEASIKEYKEQK 109

[28][TOP]
>UniRef100_UPI00017F079B PREDICTED: similar to DNA-directed RNA polymerases I and III
           subunit RPAC2 (RNA polymerases I and III subunit AC2)
           (DNA-directed RNA polymerase I subunit D) (DNA-directed
           RNA polymerase I 16 kDa polypeptide) (RPA16) (RPC16)
           (hRPA19) (AC19) n=1 Tax=Sus scrofa RepID=UPI00017F079B
          Length = 133

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           M   + TD    TF L +EDHT  NS+R+ + ++P V FCGY+  HPSE+++N+R+QT G
Sbjct: 29  MVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSESKINLRIQTRG 88

Query: 297 D-PACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSKTG 184
             PA E  + G  +LM +CQHV   FE ++  +K  K G
Sbjct: 89  ALPAVEPFQRGLTELMNVCQHVLDKFEASIKAYKDHKAG 127

[29][TOP]
>UniRef100_UPI00004BE302 UPI00004BE302 related cluster n=1 Tax=Canis lupus familiaris
           RepID=UPI00004BE302
          Length = 133

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           M   + TD    TF L +EDHT  NS+R+ + ++P V FCGY+  HPSE+++N+R+QT G
Sbjct: 29  MVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSESKINLRIQTRG 88

Query: 297 D-PACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
             PA E  + G  +LM +CQHV   FE ++ ++K  K
Sbjct: 89  ALPAVEPFQRGLNELMNVCQHVLDKFEASIKEYKDQK 125

[30][TOP]
>UniRef100_C1BEM0 DNA-directed RNA polymerase I subunit D n=1 Tax=Oncorhynchus mykiss
           RepID=C1BEM0_ONCMY
          Length = 115

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 46/97 (47%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
 Frame = -1

Query: 459 TDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACE 283
           TD    TF L +EDHT  NS+R+ + +   V FCGYSI HPSE+++N R+QT G  PA E
Sbjct: 20  TDEGCVTFVLHEEDHTLGNSLRYMVMKSLDVDFCGYSITHPSESKINFRIQTRGGVPAVE 79

Query: 282 VLKDGCQDLMLMCQHVRSTFEKAVNDFKTSKTGDHMD 172
            L+ G  +L  +CQHV +TF+++V++F+ S+  D MD
Sbjct: 80  PLRRGLNELSDVCQHVLNTFQRSVSEFR-SQQEDVMD 115

[31][TOP]
>UniRef100_Q2R8T1 Expressed protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q2R8T1_ORYSJ
          Length = 126

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 39/61 (63%), Positives = 49/61 (80%)
 Frame = -1

Query: 351 SIPHPSENRVNVRVQTTGDPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSKTGDHMD 172
           SIPHP++N+VN+RVQTTGDPA +V KDG QDL++MCQHVR TF+ AV DF++      MD
Sbjct: 63  SIPHPADNKVNIRVQTTGDPAIDVFKDGLQDLIVMCQHVRGTFDNAVVDFRSKVPAQQMD 122

Query: 171 I 169
           I
Sbjct: 123 I 123

[32][TOP]
>UniRef100_Q0ITT7 Os11g0218100 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group
           RepID=Q0ITT7_ORYSJ
          Length = 143

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 39/61 (63%), Positives = 49/61 (80%)
 Frame = -1

Query: 351 SIPHPSENRVNVRVQTTGDPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSKTGDHMD 172
           SIPHP++N+VN+RVQTTGDPA +V KDG QDL++MCQHVR TF+ AV DF++      MD
Sbjct: 80  SIPHPADNKVNIRVQTTGDPAIDVFKDGLQDLIVMCQHVRGTFDNAVVDFRSKVPAQQMD 139

Query: 171 I 169
           I
Sbjct: 140 I 140

[33][TOP]
>UniRef100_B8BJQ3 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=B8BJQ3_ORYSI
          Length = 126

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 39/61 (63%), Positives = 49/61 (80%)
 Frame = -1

Query: 351 SIPHPSENRVNVRVQTTGDPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSKTGDHMD 172
           SIPHP++N+VN+RVQTTGDPA +V KDG QDL++MCQHVR TF+ AV DF++      MD
Sbjct: 63  SIPHPADNKVNIRVQTTGDPAIDVFKDGLQDLIVMCQHVRGTFDNAVVDFRSKVPAQQMD 122

Query: 171 I 169
           I
Sbjct: 123 I 123

[34][TOP]
>UniRef100_UPI0000F31A28 UPI0000F31A28 related cluster n=1 Tax=Bos taurus
           RepID=UPI0000F31A28
          Length = 133

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           M   + TD    TF L +EDHT  NS+R+ + ++P V FCGY+  HPSE+++N+R+QT G
Sbjct: 29  MVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSESKINLRIQTRG 88

Query: 297 D-PACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
             P  E  + G  DLM +CQHV   FE ++ ++K  K
Sbjct: 89  ALPPVEPFQRGVTDLMNVCQHVLDKFEASIKEYKDQK 125

[35][TOP]
>UniRef100_B7P8Y3 RNA polymerase I/III 16Kd polypeptide, putative n=1 Tax=Ixodes
           scapularis RepID=B7P8Y3_IXOSC
          Length = 109

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 40/91 (43%), Positives = 61/91 (67%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           T+ L D+DHT  NS+R+ + ++P+V FCGY+IPHPSE +V++R++T    A E LK G Q
Sbjct: 19  TYLLDDQDHTLGNSLRYMIMKNPQVKFCGYAIPHPSERKVHLRIETRDITADEALKKGLQ 78

Query: 261 DLMLMCQHVRSTFEKAVNDFKTSKTGDHMDI 169
           DL  M +H+   FEK V   K + + + M++
Sbjct: 79  DLHQMSEHILKVFEKTVAKHKATVSEEKMEM 109

[36][TOP]
>UniRef100_A5DS75 DNA-directed RNA polymerases I and III 16 kDa polypeptide n=1
           Tax=Lodderomyces elongisporus RepID=A5DS75_LODEL
          Length = 135

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 41/94 (43%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-P 292
           GS  D + ++F ++DEDHT  N++R+ + ++P V FCGYSIPHPSEN++NVR+QT G+  
Sbjct: 39  GSLEDGTSASFQILDEDHTLGNALRYMIMKNPEVEFCGYSIPHPSENKLNVRIQTYGNIS 98

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
           A E L  G  +L  +C  V   FE+ + +   S+
Sbjct: 99  AVEALHQGLDNLSELCDVVEEKFEEKLKEGNYSR 132

[37][TOP]
>UniRef100_UPI00001CB741 RNA polymerase 1-3 n=1 Tax=Rattus norvegicus RepID=UPI00001CB741
          Length = 133

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           M   + TD    TF L +EDHT  N +R+ + ++P V FCGY+  HPSE+++N+R+QT G
Sbjct: 29  MVQAAGTDRQCVTFVLHEEDHTLGNCLRYIIMKNPEVEFCGYTTTHPSESKINLRIQTRG 88

Query: 297 D-PACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
             PA E  + G  +L+ +CQHV   FE +V D+K  K
Sbjct: 89  ALPAVEPFQKGLNELLNVCQHVLVKFEASVKDYKDKK 125

[38][TOP]
>UniRef100_UPI0000610BFE DNA-directed RNA polymerase I subunit D (EC 2.7.7.6) (DNA-directed
           RNA polymerase I 16 kDa polypeptide) (RPA16). n=1
           Tax=Gallus gallus RepID=UPI0000610BFE
          Length = 119

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = -1

Query: 459 TDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACE 283
           TD +  TF L DEDHT  NS+R+ + ++P V FCGY I HPSE+++N R+QT G  PA E
Sbjct: 19  TDGNCVTFVLHDEDHTLGNSLRYMVMKNPDVEFCGYCITHPSESKINFRIQTRGSLPAVE 78

Query: 282 VLKDGCQDLMLMCQHVRSTFE 220
             + G  DLM +CQHV  TFE
Sbjct: 79  PFRKGLNDLMGVCQHVLDTFE 99

[39][TOP]
>UniRef100_C1BYC4 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Esox
           lucius RepID=C1BYC4_ESOLU
          Length = 114

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 42/83 (50%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGC 265
           TF L +EDHT  NS+R+ + ++  V FCGYSI HPSE+++N R+QT G  PA E L+ G 
Sbjct: 26  TFVLHEEDHTLGNSLRYMVMKNLDVDFCGYSITHPSESKINFRIQTRGAVPAVEPLRRGL 85

Query: 264 QDLMLMCQHVRSTFEKAVNDFKT 196
            +L  +CQHV +TFEK V++F++
Sbjct: 86  TELTDLCQHVLNTFEKRVSEFRS 108

[40][TOP]
>UniRef100_Q6C4D6 YALI0E27676p n=1 Tax=Yarrowia lipolytica RepID=Q6C4D6_YARLI
          Length = 140

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 43/94 (45%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-P 292
           G+  D +  +F   +EDHT  N++++ + ++P V FCGYSIPHPSE ++N+R+QT GD  
Sbjct: 47  GASADKTACSFQFTEEDHTIGNALQYIIMKNPEVEFCGYSIPHPSEAKLNIRIQTYGDIT 106

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
           A E L+ G  DL+  C  V++ F  AV DF TSK
Sbjct: 107 AIEALQKGLDDLIQACDVVKNKFTDAVTDF-TSK 139

[41][TOP]
>UniRef100_P97304 DNA-directed RNA polymerases I and III subunit RPAC2 n=2 Tax=Mus
           musculus RepID=RPAC2_MOUSE
          Length = 133

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           M   + TD    TF L +EDHT  N +R+ + ++P V FCGY+  HPSE+++N+R+QT G
Sbjct: 29  MVQAAGTDRQCVTFVLHEEDHTLGNCLRYIIMKNPEVEFCGYTTTHPSESKINLRIQTRG 88

Query: 297 D-PACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
             PA E  + G  +L+ +CQHV   FE ++ D+K  K
Sbjct: 89  ALPAVEPFQKGLNELLNVCQHVLVKFEASIKDYKAKK 125

[42][TOP]
>UniRef100_C4R752 Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115
           RepID=C4R752_PICPG
          Length = 136

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-P 292
           G+  D + ++F ++DEDHT  NS+R+ + ++P V +CGYSIPHPSE ++N+R+QT G   
Sbjct: 40  GASEDGTAASFQILDEDHTLGNSLRYIIIKNPEVEYCGYSIPHPSEAKLNIRIQTYGGMT 99

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEK--AVNDFKTSK 190
           A E L+ G  DL+ +C HV   F    A  D+ T +
Sbjct: 100 AVEALRKGLDDLVDICDHVEKKFSDVIAAGDYSTEE 135

[43][TOP]
>UniRef100_A7TTT6 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
           DSM 70294 RepID=A7TTT6_VANPO
          Length = 128

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = -1

Query: 492 D*LSVMEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVR 313
           D + ++   +  D + ++F +MDEDHT  N++R+ + ++P V FCGYSIPHPSEN +N+R
Sbjct: 31  DKIKILPQATSEDGTCASFQIMDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENLLNLR 90

Query: 312 VQTTGD-PACEVLKDGCQDLMLMCQHVRSTFEKAVND 205
           +QT G   A E L+ G  DLM MC  V   F + + +
Sbjct: 91  IQTYGSTTAVEALQKGLGDLMDMCDVVEEKFTQRIKE 127

[44][TOP]
>UniRef100_C0H7G7 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Salmo
           salar RepID=C0H7G7_SALSA
          Length = 102

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 44/91 (48%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGC 265
           TF L +EDHT  NS+R+ + ++  V FCGYSI HPSE+++N R+QT G  PA E L+ G 
Sbjct: 13  TFVLHEEDHTLGNSLRYMVMKNLDVDFCGYSITHPSESKINFRIQTRGGVPAVEPLRRGL 72

Query: 264 QDLMLMCQHVRSTFEKAVNDFKTSKTGDHMD 172
            +L  +CQHV +TF++ V +F+ S+  D MD
Sbjct: 73  NELTDVCQHVLNTFQRRVTEFR-SQQEDVMD 102

[45][TOP]
>UniRef100_B5XCF3 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Salmo
           salar RepID=B5XCF3_SALSA
          Length = 115

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 44/91 (48%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGC 265
           TF L +EDHT  NS+R+ + ++  V FCGYSI HPSE+++N R+QT G  PA E L+ G 
Sbjct: 26  TFVLHEEDHTLGNSLRYMVMKNLDVDFCGYSITHPSESKINFRIQTRGGVPAVEPLRRGL 85

Query: 264 QDLMLMCQHVRSTFEKAVNDFKTSKTGDHMD 172
            +L  +CQHV +TF++ V +F+ S+  D MD
Sbjct: 86  NELTDVCQHVLNTFQRRVTEFR-SQQEDVMD 115

[46][TOP]
>UniRef100_B9WL57 DNA-directed RNA polymerase subunit, common to RNA polymerases I
           and III, putative n=1 Tax=Candida dubliniensis CD36
           RepID=B9WL57_CANDC
          Length = 130

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 38/87 (43%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-P 292
           G+  D + ++F ++DEDHT  N++R+ + ++P V FCGYSIPHPSEN++N+R+QT G+  
Sbjct: 34  GASEDGTSASFQIIDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNIS 93

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAV 211
           A E L  G  +L  +C  +   F++AV
Sbjct: 94  AVEALHQGLDNLSELCSAIEDKFDEAV 120

[47][TOP]
>UniRef100_A0E1A2 Chromosome undetermined scaffold_73, whole genome shotgun sequence
           n=1 Tax=Paramecium tetraurelia RepID=A0E1A2_PARTE
          Length = 122

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 38/91 (41%), Positives = 57/91 (62%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           ME   ++D    TF   DEDHT  NS+R+ L   P V FCGYS+PHPSEN++N+R+QT  
Sbjct: 31  MEIQEHSDPFNGTFVFFDEDHTLGNSLRYILANQPNVEFCGYSLPHPSENKMNMRLQTVN 90

Query: 297 DPACEVLKDGCQDLMLMCQHVRSTFEKAVND 205
           +   +++ DG + L  +C  +   F+KA+ +
Sbjct: 91  ETKEKIMNDGLKCLSQICDIIEDKFKKALEN 121

[48][TOP]
>UniRef100_UPI0001924FE8 PREDICTED: similar to polymerase (RNA) I polypeptide D, 16kDa n=1
           Tax=Hydra magnipapillata RepID=UPI0001924FE8
          Length = 127

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 38/81 (46%), Positives = 56/81 (69%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF   +EDHT  NS+R+ + ++P V +CGYS PHPSE ++N+R+QT    A + L+ G  
Sbjct: 28  TFVFHNEDHTIGNSLRYMIMKNPEVQYCGYSNPHPSEPKINLRIQTHKIAAPDALQKGLL 87

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           DL  +C HV +TF+K+V +FK
Sbjct: 88  DLQNVCDHVLATFQKSVQEFK 108

[49][TOP]
>UniRef100_Q59LT9 Potential RNA Polymerase I and III shared subunit Rpc19 n=1
           Tax=Candida albicans RepID=Q59LT9_CANAL
          Length = 131

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-P 292
           GS  D + ++F ++DEDHT  N++R+ + ++P V FCGYSIPHPSEN++N+R+QT G+  
Sbjct: 35  GSSEDGTSASFQIIDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNIS 94

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAV 211
           A E L  G  +L  +C  +   F+ A+
Sbjct: 95  AVEALHQGLDNLSELCGAIEDKFDDAI 121

[50][TOP]
>UniRef100_C4YL76 DNA-directed RNA polymerases I and III 14 kDa polypeptide n=1
           Tax=Candida albicans RepID=C4YL76_CANAL
          Length = 133

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-P 292
           GS  D + ++F ++DEDHT  N++R+ + ++P V FCGYSIPHPSEN++N+R+QT G+  
Sbjct: 37  GSSEDGTSASFQIIDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNIS 96

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAV 211
           A E L  G  +L  +C  +   F+ A+
Sbjct: 97  AVEALHQGLDNLSELCGAIEDKFDDAI 123

[51][TOP]
>UniRef100_A5DL81 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
           RepID=A5DL81_PICGU
          Length = 123

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-P 292
           GS  D + +TF ++DEDHT  N++R+ + ++P V FCGYSIPHPSEN++N+R+QT G+  
Sbjct: 27  GSSEDGTAATFQIIDEDHTLGNTLRYVIMKNPEVEFCGYSIPHPSENKMNIRIQTYGNIS 86

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAVN 208
           + E L  G  +L  +C  + + F + ++
Sbjct: 87  SVEALHQGLDNLSELCTVIETKFSEKIS 114

[52][TOP]
>UniRef100_UPI000151BC99 hypothetical protein PGUG_04032 n=1 Tax=Pichia guilliermondii ATCC
           6260 RepID=UPI000151BC99
          Length = 123

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-P 292
           GS  D + +TF ++DEDHT  N++R+ + ++P V FCGYSIPHPSEN++N+R+QT G+  
Sbjct: 27  GSSEDGTAATFQIIDEDHTLGNTLRYVIMKNPEVEFCGYSIPHPSENKMNIRIQTYGNIS 86

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAV 211
           + E L  G  +L  +C  + + F + +
Sbjct: 87  SVEALHQGLDNLSELCTVIETKFSEKI 113

[53][TOP]
>UniRef100_Q01D46 Trithorax-like (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01D46_OSTTA
          Length = 2007

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 40/82 (48%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
 Frame = -1

Query: 450  SKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT---TGDPACEV 280
            +++TF+L  EDHT  N++R+ LN +P VT CGYS PHP E RVNVRVQT    G  A   
Sbjct: 1918 AEATFTLEGEDHTLGNALRYVLNANPSVTLCGYSAPHPMERRVNVRVQTHGREGATARGA 1977

Query: 279  LKDGCQDLMLMCQHVRSTFEKA 214
            ++D   D++ +C HV  ++EKA
Sbjct: 1978 MRDALLDVISVCDHVHESYEKA 1999

[54][TOP]
>UniRef100_C5DRN5 ZYRO0B09878p n=1 Tax=Zygosaccharomyces rouxii CBS 732
           RepID=C5DRN5_ZYGRC
          Length = 130

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 39/95 (41%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
 Frame = -1

Query: 486 LSVMEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQ 307
           + ++   +  D + ++F + +EDHT  N++R+ + ++P V FCGYSIPHPSEN +N+RVQ
Sbjct: 35  IKILPQATSEDGTCASFQIAEEDHTLGNALRYMIMKNPDVEFCGYSIPHPSENLLNIRVQ 94

Query: 306 TTGD-PACEVLKDGCQDLMLMCQHVRSTFEKAVND 205
           T G+  A +VL  G QDLM +C  V   F + + +
Sbjct: 95  TYGNVTAVDVLHKGLQDLMDLCDAVEDKFTQKIRE 129

[55][TOP]
>UniRef100_UPI00003BD255 hypothetical protein DEHA0A13409g n=1 Tax=Debaryomyces hansenii
           CBS767 RepID=UPI00003BD255
          Length = 134

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-P 292
           GS  D + ++F ++DEDHT  N++R+ + ++P V FCGYSIPHPSEN++N+R+QT G+  
Sbjct: 38  GSSEDGTAASFQIVDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNIS 97

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAV 211
           A E L  G  +L  +C  +   F + +
Sbjct: 98  AVEALHQGLDNLSELCSTIEEKFSEKI 124

[56][TOP]
>UniRef100_A8MRK9 Uncharacterized protein At2g29540.3 n=1 Tax=Arabidopsis thaliana
           RepID=A8MRK9_ARATH
          Length = 139

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 39/59 (66%), Positives = 47/59 (79%)
 Frame = -1

Query: 375 PRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFK 199
           PRVT   Y+IPHPS  +VN+RVQTTGDPA EV KD CQ+LM M +HVRS F+KAV ++K
Sbjct: 52  PRVTVAAYTIPHPSLEQVNIRVQTTGDPAREVFKDACQELMQMNRHVRSVFDKAVAEYK 110

[57][TOP]
>UniRef100_Q6BY26 DEHA2A12980p n=1 Tax=Debaryomyces hansenii RepID=Q6BY26_DEBHA
          Length = 129

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-P 292
           GS  D + ++F ++DEDHT  N++R+ + ++P V FCGYSIPHPSEN++N+R+QT G+  
Sbjct: 33  GSSEDGTAASFQIVDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNIS 92

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAV 211
           A E L  G  +L  +C  +   F + +
Sbjct: 93  AVEALHQGLDNLSELCSTIEEKFSEKI 119

[58][TOP]
>UniRef100_P28000 DNA-directed RNA polymerases I and III subunit RPAC2 n=5
           Tax=Saccharomyces cerevisiae RepID=RPAC2_YEAST
          Length = 142

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 37/93 (39%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
 Frame = -1

Query: 486 LSVMEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQ 307
           + ++   +  D + ++F +++EDHT  N++R+ + ++P V FCGYSIPHPSEN +N+R+Q
Sbjct: 47  IKLLTQATSEDGTSASFQIVEEDHTLGNALRYVIMKNPDVEFCGYSIPHPSENLLNIRIQ 106

Query: 306 TTGD-PACEVLKDGCQDLMLMCQHVRSTFEKAV 211
           T G+  A + L+ G +DLM +C  V S F + +
Sbjct: 107 TYGETTAVDALQKGLKDLMDLCDVVESKFTEKI 139

[59][TOP]
>UniRef100_A3C9S3 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
           Group RepID=A3C9S3_ORYSJ
          Length = 156

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 36/52 (69%), Positives = 46/52 (88%)
 Frame = -1

Query: 351 SIPHPSENRVNVRVQTTGDPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKT 196
           SIPHP++N+VN+RVQTTGDPA +V KDG QDL++MCQHVR TF+ AV DF++
Sbjct: 63  SIPHPADNKVNIRVQTTGDPAIDVFKDGLQDLIVMCQHVRGTFDNAVVDFRS 114

[60][TOP]
>UniRef100_B6KBV3 DNA-directed RNA polymerases I and III subunit RPAC2, putative n=3
           Tax=Toxoplasma gondii RepID=B6KBV3_TOXGO
          Length = 129

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 35/83 (42%), Positives = 58/83 (69%)
 Frame = -1

Query: 450 SKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKD 271
           S+ TF+L  EDHT  N++R  L + P V F GYS+PHP++  +N+R+QTTG+ A ++L++
Sbjct: 35  SQLTFTLTGEDHTLGNTIRSILVRKPGVEFAGYSVPHPTQPEMNIRLQTTGESAMQLLRE 94

Query: 270 GCQDLMLMCQHVRSTFEKAVNDF 202
              DL  +C H+ + +++A+ DF
Sbjct: 95  SFDDLASICDHLDTLYDEALEDF 117

[61][TOP]
>UniRef100_Q6DRI4 DNA-directed RNA polymerases I and III subunit RPAC2 n=1 Tax=Danio
           rerio RepID=RPAC2_DANRE
          Length = 112

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEVLKDGC 265
           TF L +EDHT  NS+R+ + +   V FCGYSI HPSE+++N R+QT  G PA E L++G 
Sbjct: 24  TFVLNEEDHTLGNSLRYMIMKSQDVEFCGYSITHPSESKINFRIQTRDGVPASEPLRNGL 83

Query: 264 QDLMLMCQHVRSTFEKAVNDFK 199
            +L  +C+HV  TFE  + +FK
Sbjct: 84  NNLTDVCKHVLQTFEARMKEFK 105

[62][TOP]
>UniRef100_A0DTF6 Chromosome undetermined scaffold_63, whole genome shotgun sequence
           n=1 Tax=Paramecium tetraurelia RepID=A0DTF6_PARTE
          Length = 122

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 38/89 (42%), Positives = 55/89 (61%)
 Frame = -1

Query: 477 MEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           ME    +D    TF   DEDHT  NS+R+ L   P V FCGYS+PHPSEN++N+R+QT  
Sbjct: 31  MEIQENSDPFNGTFVFFDEDHTLGNSLRYILANQPNVEFCGYSLPHPSENKMNMRLQTVN 90

Query: 297 DPACEVLKDGCQDLMLMCQHVRSTFEKAV 211
           +   +V+ DG + L  +C  +   F++A+
Sbjct: 91  ETKEKVMNDGLKCLSQICDIIEDKFKQAL 119

[63][TOP]
>UniRef100_Q755Q7 AFL220Cp n=1 Tax=Eremothecium gossypii RepID=Q755Q7_ASHGO
          Length = 135

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
 Frame = -1

Query: 492 D*LSVMEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVR 313
           D + ++   +  D + + F + DEDHT  N++R+ + ++P V FCGYSIPHPSEN +N+R
Sbjct: 38  DKIRLLPQATSEDGTCAFFQITDEDHTLGNALRYIIMKNPEVEFCGYSIPHPSENFLNIR 97

Query: 312 VQTTGD-PACEVLKDGCQDLMLMCQHVRSTFEKAVND 205
           +QT G   A + L  G QDLM MC  V   F + + +
Sbjct: 98  IQTYGKVTAVDALHKGLQDLMDMCDVVEDKFTQRIRE 134

[64][TOP]
>UniRef100_A3LQW8 RNA polymerase I and III subunit n=1 Tax=Pichia stipitis
           RepID=A3LQW8_PICST
          Length = 119

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 36/88 (40%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-P 292
           G+  D + ++F +++EDHT  N++R+ + ++P V FCGYSIPHPSEN++N+R+QT G+  
Sbjct: 23  GASEDGTAASFQILEEDHTLGNALRYMIMKNPEVEFCGYSIPHPSENKLNIRIQTYGNIT 82

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAVN 208
           A E L  G  +L  +C  +   FE+ ++
Sbjct: 83  AVEALHQGLDNLAELCTVIGDKFEEKIS 110

[65][TOP]
>UniRef100_B3MNN6 GF15205 n=1 Tax=Drosophila ananassae RepID=B3MNN6_DROAN
          Length = 106

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 35/84 (41%), Positives = 55/84 (65%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF  M+E HT  N+++  +++ P V FCGY+IPHP+E +++ R+Q+  D A ++LK G +
Sbjct: 19  TFVFMNEGHTLGNALKTIISRYPEVDFCGYTIPHPTEQKLHFRIQSHRDRAVDILKRGLE 78

Query: 261 DLMLMCQHVRSTFEKAVNDFKTSK 190
           DL  +C H   TFE  +N+F   K
Sbjct: 79  DLEALCDHTIVTFETEMNNFNAMK 102

[66][TOP]
>UniRef100_UPI000186F34B DNA-directed RNA polymerase I 16 kD polypeptide, putative n=1
           Tax=Pediculus humanus corporis RepID=UPI000186F34B
          Length = 103

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 36/87 (41%), Positives = 56/87 (64%)
 Frame = -1

Query: 459 TDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEV 280
           +D S  TF    E HT  N++R  +++   VTFCGY+IPHPSE ++N R+QT+G  A ++
Sbjct: 12  SDESSRTFVFDGEGHTLGNALRSVISRYSEVTFCGYTIPHPSEEKINFRIQTSGARAVDI 71

Query: 279 LKDGCQDLMLMCQHVRSTFEKAVNDFK 199
           LK G  DL   C+++ + F + V ++K
Sbjct: 72  LKKGLTDLEEHCEYIMNVFSQEVENYK 98

[67][TOP]
>UniRef100_Q6CIV1 KLLA0F23760p n=1 Tax=Kluyveromyces lactis RepID=Q6CIV1_KLULA
          Length = 127

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
 Frame = -1

Query: 486 LSVMEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQ 307
           + ++   +  D + ++F + DEDHT  N++R+ + ++P V FCGYSIPHPSEN +++R+Q
Sbjct: 32  IKLLTEATSEDGTSASFRITDEDHTLGNTLRYMIMKNPEVEFCGYSIPHPSENFLHIRIQ 91

Query: 306 TTGD-PACEVLKDGCQDLMLMCQHVRSTFEKAVND 205
           T G   A E L  G  DLM MC  V   F + + +
Sbjct: 92  TYGKITAVEALHKGLGDLMDMCDAVEDRFTQRIRE 126

[68][TOP]
>UniRef100_C5DGY8 KLTH0D09350p n=1 Tax=Lachancea thermotolerans CBS 6340
           RepID=C5DGY8_LACTC
          Length = 146

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 38/95 (40%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
 Frame = -1

Query: 486 LSVMEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQ 307
           + ++   +  D + ++F + +EDHT  N++R+ + ++P V FCGYSIPHPSE  +N+R+Q
Sbjct: 51  IRLLSSATSEDGTCASFQISEEDHTLGNALRYIIMKNPDVEFCGYSIPHPSETLLNLRIQ 110

Query: 306 TTGD-PACEVLKDGCQDLMLMCQHVRSTFEKAVND 205
           T G   A EVL+ G QDLM +C  V   F + + +
Sbjct: 111 TYGKFTAVEVLQKGLQDLMDLCDAVEDKFTQRIRE 145

[69][TOP]
>UniRef100_Q09177 DNA-directed RNA polymerases I and III subunit RPAC2 n=1
           Tax=Schizosaccharomyces pombe RepID=RPAC2_SCHPO
          Length = 125

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTT-GDP 292
           G   DL+  TF +  EDHT  NS+R+ + ++P V FCGYSIPHPSE ++N R+QT     
Sbjct: 27  GHSADLTSVTFQIQKEDHTLGNSLRYVIMKNPEVEFCGYSIPHPSEAKMNFRIQTAPSTT 86

Query: 291 ACEVLKDGCQDLMLMCQHVRSTF-EKAVNDFKTSKTGD 181
           A +VL+ G  DL+ +C  V   F E+   D  T+   D
Sbjct: 87  AVDVLRKGLDDLIDLCDAVTEKFTEQLPRDTSTTMEVD 124

[70][TOP]
>UniRef100_C4JP01 Putative uncharacterized protein n=1 Tax=Uncinocarpus reesii 1704
           RepID=C4JP01_UNCRE
          Length = 145

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDP-ACEVLKDG 268
           ++F    EDHT  N++R+ + ++P V FCGY++PHPSE R+N+R+QT       EVL  G
Sbjct: 58  ASFQFEKEDHTLGNALRYVIMKNPGVEFCGYTMPHPSEERMNLRIQTYSPANVFEVLDKG 117

Query: 267 CQDLMLMCQHVRSTFEKAVNDFKTSK 190
             DLM +C  V  TF  A +DF+T+K
Sbjct: 118 FSDLMDLCDVVLETFTAARDDFETNK 143

[71][TOP]
>UniRef100_B6JWF5 DNA-directed RNA polymerase I and III subunit Rpc19 n=1
           Tax=Schizosaccharomyces japonicus yFS275
           RepID=B6JWF5_SCHJY
          Length = 123

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDP 292
           G   D +  TF +  EDHT  N++R+ + ++P V FCGYSIPHPSE ++N+R+QT +   
Sbjct: 27  GHSADYTSVTFQIQKEDHTLGNALRYMIMKNPDVEFCGYSIPHPSEAKMNLRIQTKSTTT 86

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSKTGD 181
           A + LK G  DLM +C  V  +F + +++  +S   D
Sbjct: 87  AIDALKKGLDDLMDLCDVVTESFNEQLSESTSSMQVD 123

[72][TOP]
>UniRef100_Q4U9J3 RNA polymerases I and III subunit (RPC19 homologue), putative n=1
           Tax=Theileria annulata RepID=Q4U9J3_THEAN
          Length = 90

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 36/79 (45%), Positives = 51/79 (64%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF + +EDHT  N++R  L +   V F GYS+PHP E  +N+R+QTTG PA EV  D   
Sbjct: 12  TFCIENEDHTLGNTLRALLVERDDVVFAGYSVPHPMEPEMNIRIQTTGQPAVEVFLDCLD 71

Query: 261 DLMLMCQHVRSTFEKAVND 205
           D++ +C  +R  FEKA+ +
Sbjct: 72  DMVKICDILREKFEKAIKE 90

[73][TOP]
>UniRef100_Q22RW2 DNA-directed RNA polymerase I subunit D n=1 Tax=Tetrahymena
           thermophila SB210 RepID=Q22RW2_TETTH
          Length = 150

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 37/86 (43%), Positives = 56/86 (65%)
 Frame = -1

Query: 456 DLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVL 277
           D + +T++  DEDHT  N+VR+ L +   V FCGY+IPHPSEN++N+R+QT    + EVL
Sbjct: 57  DRTCATYTFYDEDHTLGNTVRYMLVKRKDVEFCGYTIPHPSENKMNLRLQTIKKNSNEVL 116

Query: 276 KDGCQDLMLMCQHVRSTFEKAVNDFK 199
           K+G   L  +C  +   F+ A+  F+
Sbjct: 117 KEGLDSLAGLCDVLNDKFDAAMKKFE 142

[74][TOP]
>UniRef100_B4M941 GJ17990 n=1 Tax=Drosophila virilis RepID=B4M941_DROVI
          Length = 106

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 34/83 (40%), Positives = 54/83 (65%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF  ++E HT  N+++  + + P V FCGY+IPHP+E +++ R+Q+  + A ++LK G +
Sbjct: 19  TFVFINEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQSHRERAIDLLKRGLE 78

Query: 261 DLMLMCQHVRSTFEKAVNDFKTS 193
           DL  +C H   TFEK +N F  S
Sbjct: 79  DLEALCDHTIETFEKEMNGFNAS 101

[75][TOP]
>UniRef100_C5P253 DNA-directed RNA polymerases I and III 16 kDa polypeptide, putative
           n=1 Tax=Coccidioides posadasii C735 delta SOWgp
           RepID=C5P253_COCP7
          Length = 145

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEVLKDG 268
           ++F    EDHT  N++R+ + ++P V FCGY++PHPSE ++N+R+QT       EVL  G
Sbjct: 58  ASFQFEGEDHTLGNALRYIIMKNPDVEFCGYTMPHPSETKMNLRIQTYASTNVFEVLDKG 117

Query: 267 CQDLMLMCQHVRSTFEKAVNDFKTSK 190
             DL+ +C  V  TF  A +DF+T+K
Sbjct: 118 LSDLIDLCDVVTETFTTARDDFETNK 143

[76][TOP]
>UniRef100_B2VVA3 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Pyrenophora tritici-repentis Pt-1C-BFP
           RepID=B2VVA3_PYRTR
          Length = 126

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 37/82 (45%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEVLKDG 268
           ++F   DEDHT  N++R+ ++++P V FCGYSIPHPSE ++N+R+QT  G     VL+ G
Sbjct: 39  ASFQFDDEDHTLGNALRYIIHKNPDVEFCGYSIPHPSEAKMNLRIQTYDGASVYTVLEKG 98

Query: 267 CQDLMLMCQHVRSTFEKAVNDF 202
            +DLM MC  V   +  A ++F
Sbjct: 99  LEDLMAMCDIVEQKYTIARDEF 120

[77][TOP]
>UniRef100_B4JPA4 GH13479 n=1 Tax=Drosophila grimshawi RepID=B4JPA4_DROGR
          Length = 106

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 33/88 (37%), Positives = 55/88 (62%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF   +E HT  N+++  + + P V FCGY+IPHP+E +++ R+Q+  + A ++LK G +
Sbjct: 19  TFVFNNEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQSHRERAIDLLKRGLE 78

Query: 261 DLMLMCQHVRSTFEKAVNDFKTSKTGDH 178
           DL  +C H  +TFE  +N F  +  G +
Sbjct: 79  DLEALCDHTMNTFETEMNSFNATAVGSN 106

[78][TOP]
>UniRef100_B3LAK8 RNA polymerase small subunit, putative n=1 Tax=Plasmodium knowlesi
           strain H RepID=B3LAK8_PLAKH
          Length = 94

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
 Frame = -1

Query: 477 MEHGSYTD----LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRV 310
           ME  +Y +    L+ +TF   +EDHT  N +R  L Q   V F GY++PHP++  +N+R+
Sbjct: 1   MEEKNYYEHMRTLTHATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQAEINLRI 60

Query: 309 QTTGDPACEVLKDGCQDLMLMCQHVRSTFEKAV 211
           QTTG+PA  +LKD   DL  +C  + + F+ AV
Sbjct: 61  QTTGEPAVNILKDALDDLSNICDIMLNKFDSAV 93

[79][TOP]
>UniRef100_B4PAH8 GE12666 n=1 Tax=Drosophila yakuba RepID=B4PAH8_DROYA
          Length = 106

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 35/84 (41%), Positives = 53/84 (63%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF   +E HT  N+++  + + P V FCGY+IPHP+E +++ R+Q+  D A ++LK G +
Sbjct: 19  TFVFTNEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQSHRDRAIDILKRGLE 78

Query: 261 DLMLMCQHVRSTFEKAVNDFKTSK 190
           DL  +C H   TFEK + DF   K
Sbjct: 79  DLEGLCDHTIVTFEKEMADFNAVK 102

[80][TOP]
>UniRef100_B4KKF8 GI17231 n=1 Tax=Drosophila mojavensis RepID=B4KKF8_DROMO
          Length = 106

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 33/83 (39%), Positives = 54/83 (65%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF  ++E HT  N+++  + + P V FCGY+IPHP+E +++ R+Q+  + A ++LK G +
Sbjct: 19  TFVFINEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQSHRERAIDLLKRGLE 78

Query: 261 DLMLMCQHVRSTFEKAVNDFKTS 193
           DL  +C H   TFEK +N F  +
Sbjct: 79  DLEALCDHTIETFEKEMNTFNAT 101

[81][TOP]
>UniRef100_B3NM84 GG21646 n=1 Tax=Drosophila erecta RepID=B3NM84_DROER
          Length = 106

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 35/84 (41%), Positives = 53/84 (63%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF   +E HT  N+++  + + P V FCGY+IPHP+E +++ R+Q+  D A ++LK G +
Sbjct: 19  TFVFTNEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQSHRDRAIDILKRGLE 78

Query: 261 DLMLMCQHVRSTFEKAVNDFKTSK 190
           DL  +C H   TFEK + DF   K
Sbjct: 79  DLEGLCDHTIVTFEKEMADFNAVK 102

[82][TOP]
>UniRef100_Q4N286 RNA polymerase small subunit, putative n=1 Tax=Theileria parva
           RepID=Q4N286_THEPA
          Length = 92

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 36/79 (45%), Positives = 50/79 (63%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF + +EDHT  N++R  L +   V F GYS+PHP E  +NVR+QTTG PA EV  D   
Sbjct: 12  TFCIENEDHTLGNTLRALLVERDDVVFAGYSVPHPMEPEMNVRIQTTGQPAVEVFLDCLD 71

Query: 261 DLMLMCQHVRSTFEKAVND 205
           D++ +C  +   FEKA+ +
Sbjct: 72  DMVKICDILTEKFEKAMKE 90

[83][TOP]
>UniRef100_B3S798 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax
           adhaerens RepID=B3S798_TRIAD
          Length = 92

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGC 265
           TF L  E+HT  N+VR+ + ++P    CGYS+PHPS++++N+R++T  +  A EV + G 
Sbjct: 12  TFVLHGENHTLGNAVRYLIMKNPETKLCGYSVPHPSQHKINLRIETNNEKDAIEVFRTGL 71

Query: 264 QDLMLMCQHVRSTFEKAV 211
           QDL  +C HV  TF+ ++
Sbjct: 72  QDLDQVCDHVLKTFDVSI 89

[84][TOP]
>UniRef100_Q7RYP4 Putative uncharacterized protein n=1 Tax=Neurospora crassa
           RepID=Q7RYP4_NEUCR
          Length = 156

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEVLKDG 268
           ++F  +DE+HT  N++R+ + ++P V FC Y+IPHPSE ++NVR+QT  G  A E L+ G
Sbjct: 66  ASFEFLDENHTLGNALRYVIMKNPDVEFCAYAIPHPSEAKMNVRIQTYEGTTAVEALRKG 125

Query: 267 CQDLMLMCQHVRSTFEKAVNDFKTSK 190
            +D+  +C  V   F +A  DF   K
Sbjct: 126 LRDIQDLCDVVSDKFLEARKDFTDKK 151

[85][TOP]
>UniRef100_Q9VIZ0 Probable DNA-directed RNA polymerases I and III subunit RPAC2 n=3
           Tax=melanogaster subgroup RepID=RPAC2_DROME
          Length = 105

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 34/84 (40%), Positives = 53/84 (63%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF   +E HT  N+++  + + P V FCGY+IPHP+E +++ R+Q+  D A ++LK G +
Sbjct: 19  TFVFTNEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQSRRDRAIDILKRGLE 78

Query: 261 DLMLMCQHVRSTFEKAVNDFKTSK 190
           DL  +C H   TFEK + +F   K
Sbjct: 79  DLEGLCDHTIVTFEKEMAEFNAMK 102

[86][TOP]
>UniRef100_Q8ILU4 RNA polymerase small subunit, putative n=1 Tax=Plasmodium
           falciparum 3D7 RepID=Q8ILU4_PLAF7
          Length = 96

 Score = 77.8 bits (190), Expect = 5e-13
 Identities = 35/82 (42%), Positives = 53/82 (64%)
 Frame = -1

Query: 456 DLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVL 277
           +L+ +TF   +EDHT  N +R  L Q   V F GY++PHP++  +NVR+QTTG PA ++L
Sbjct: 12  NLTHATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQPEINVRIQTTGKPAIDIL 71

Query: 276 KDGCQDLMLMCQHVRSTFEKAV 211
           K+   DL  MC  + + F +A+
Sbjct: 72  KESLDDLGNMCDIMLNKFNEAL 93

[87][TOP]
>UniRef100_A5K177 RNA polymerase small subunit, putative n=1 Tax=Plasmodium vivax
           RepID=A5K177_PLAVI
          Length = 97

 Score = 77.8 bits (190), Expect = 5e-13
 Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
 Frame = -1

Query: 477 MEHGSYTD----LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRV 310
           ME  +Y +    L+ +TF   +EDHT  N +R  L Q   V F GY++PHP++  +N+R+
Sbjct: 1   MEEKNYYEHMRTLTHATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQAEINLRI 60

Query: 309 QTTGDPACEVLKDGCQDLMLMCQHVRSTFEKAV 211
           QTTG+PA  +LKD   DL  +C  + + F+  V
Sbjct: 61  QTTGEPAINILKDSLDDLSNICDIMLNKFDSVV 93

[88][TOP]
>UniRef100_C0SH10 Predicted protein n=1 Tax=Paracoccidioides brasiliensis Pb03
           RepID=C0SH10_PARBP
          Length = 201

 Score = 77.8 bits (190), Expect = 5e-13
 Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEVLKDGC 265
           +F    EDHT  N++R+ + ++P V FCGY++PHPSE ++N+R+QT     A  VL+ G 
Sbjct: 115 SFQFDREDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTYDTTTAIAVLEKGF 174

Query: 264 QDLMLMCQHVRSTFEKAVNDFKTSK 190
            DLM +C  V  TF +A N F  SK
Sbjct: 175 DDLMELCDVVTETFTEAKNAFDGSK 199

[89][TOP]
>UniRef100_Q29CK4 GA10493 n=2 Tax=pseudoobscura subgroup RepID=Q29CK4_DROPS
          Length = 110

 Score = 77.0 bits (188), Expect = 9e-13
 Identities = 32/80 (40%), Positives = 53/80 (66%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF  ++E HT  N+++  + + P V FCGY+IPHP+E +++ R+Q+  D A ++LK G +
Sbjct: 19  TFVFLNEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQSRRDRAVDLLKRGLE 78

Query: 261 DLMLMCQHVRSTFEKAVNDF 202
           DL  +C H   TF K +++F
Sbjct: 79  DLEALCDHTIDTFGKEMDNF 98

[90][TOP]
>UniRef100_A8NBI2 Predicted protein n=1 Tax=Coprinopsis cinerea okayama7#130
           RepID=A8NBI2_COPC7
          Length = 111

 Score = 77.0 bits (188), Expect = 9e-13
 Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDP 292
           G+  DLS +T+ L DE HT  NS+R+ L ++P+V FCGYS PHPSEN +NVR+Q   G  
Sbjct: 13  GAAPDLSAATYQLHDESHTIGNSLRWMLMKNPKVEFCGYSNPHPSENVINVRIQMYDGLS 72

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAVNDFK 199
           + + L     DL  +C+ V   + +++ + K
Sbjct: 73  SLDALLKALSDLDNLCEAVEDAYLESLREEK 103

[91][TOP]
>UniRef100_C5M4D1 DNA-directed RNA polymerases I and III 14 kDa polypeptide n=1
           Tax=Candida tropicalis MYA-3404 RepID=C5M4D1_CANTT
          Length = 128

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-P 292
           GS  D + ++F ++DEDHT  N++R+ + ++P V F GYSIPHPSEN++N R+QT G+  
Sbjct: 32  GSSEDGTSASFQIIDEDHTLGNALRYIIMKNPEVEFVGYSIPHPSENKLNFRIQTYGNIT 91

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAV 211
           A E    G  +L  +C  +   F++ +
Sbjct: 92  AVEAFHMGLDNLSELCGVIEDKFQETL 118

[92][TOP]
>UniRef100_Q6FLF2 Strain CBS138 chromosome L complete sequence n=1 Tax=Candida
           glabrata RepID=Q6FLF2_CANGA
          Length = 137

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
 Frame = -1

Query: 486 LSVMEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQ 307
           + ++   +  D + ++F +  EDHT  N++R+ + ++P V FCGYSIPHPSE  +N+R+Q
Sbjct: 43  IKLLPQATSEDGTCASFQIAQEDHTLGNALRYIIMKNPEVEFCGYSIPHPSEELLNLRIQ 102

Query: 306 TTGD-PACEVLKDGCQDLMLMCQHVRSTF 223
           T G+  A + L+ G  DL+ +C  V+  F
Sbjct: 103 TYGNITAVDALQKGLDDLIDLCDAVKDKF 131

[93][TOP]
>UniRef100_C5JYX4 Predicted protein n=2 Tax=Ajellomyces dermatitidis
           RepID=C5JYX4_AJEDS
          Length = 142

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDP-ACEVLKDG 268
           ++F    EDHT  N++R+ + ++P V FCGY++PHPSE ++N+R+QT       EVL+ G
Sbjct: 55  ASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTYDTTNVFEVLEKG 114

Query: 267 CQDLMLMCQHVRSTFEKAVNDF 202
             DLM +C  V  TF +A N F
Sbjct: 115 FDDLMDLCDTVTETFMEAKNAF 136

[94][TOP]
>UniRef100_B8MSM4 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MSM4_TALSN
          Length = 136

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
 Frame = -1

Query: 483 SVMEHGS--YTDLSKST-----FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENR 325
           +V+EHG    T LS +T     F   +E HT  N++R+ + ++P V FCGY+IPHPSE +
Sbjct: 25  TVIEHGENRITILSGATETAASFQFKEEGHTLGNALRYVIMKNPAVEFCGYTIPHPSEAK 84

Query: 324 VNVRVQT-TGDPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
           +N+R+QT     A E L+ G  DLM +C  V   F  A + F   +
Sbjct: 85  MNLRIQTYENTTAIEALEKGLDDLMDLCDVVTDKFTVARDSFNAER 130

[95][TOP]
>UniRef100_UPI00015B57E8 PREDICTED: similar to ENSANGP00000022241 n=1 Tax=Nasonia
           vitripennis RepID=UPI00015B57E8
          Length = 105

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 32/80 (40%), Positives = 50/80 (62%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF   DE HT  N +R  +   P V FCGY++PHP+E +++ R+Q     A ++L+ G +
Sbjct: 19  TFVFQDEGHTLGNVLRSIVAHYPDVEFCGYTVPHPAEAKMHFRIQAKKGRAVDILRRGLE 78

Query: 261 DLMLMCQHVRSTFEKAVNDF 202
           DL  +C H   TFEKA++++
Sbjct: 79  DLSKVCDHTIKTFEKAMDEY 98

[96][TOP]
>UniRef100_B6QVD5 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Penicillium marneffei ATCC 18224 RepID=B6QVD5_PENMQ
          Length = 135

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDG 268
           ++F   +E HT  N++R+ + ++P+V FCGY+IPHPSE ++N+R+QT  D  A E L+ G
Sbjct: 44  ASFQFKEEGHTLGNALRYVIMKNPKVEFCGYTIPHPSEAKMNLRIQTYDDTTAIEALEKG 103

Query: 267 CQDLMLMCQHVRSTFEKAVNDFKTSKTGDHM 175
             DLM +C  V   F  A + F  ++ G+ M
Sbjct: 104 LNDLMDLCDVVSDKFTVARDAF-VAEQGNQM 133

[97][TOP]
>UniRef100_Q4YUC7 RNA polymerase small subunit, putative n=1 Tax=Plasmodium berghei
           RepID=Q4YUC7_PLABE
          Length = 96

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
 Frame = -1

Query: 477 MEHGSYTD----LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRV 310
           ME  SY      ++ +TF   +EDHT  N +R  L Q   + F GY++PHP++  +N+R+
Sbjct: 1   MEEKSYFQNLKTITHATFCFENEDHTLGNCLRCILLQKEGIEFAGYTVPHPTQAEINLRI 60

Query: 309 QTTGDPACEVLKDGCQDLMLMCQHVRSTFEKAV 211
           QTTG PA  +LKD   DL  +C  +   F+ A+
Sbjct: 61  QTTGKPAINILKDSLDDLSNICTILLEKFKNAL 93

[98][TOP]
>UniRef100_Q4Y0J9 RNA polymerase small subunit, putative n=1 Tax=Plasmodium chabaudi
           RepID=Q4Y0J9_PLACH
          Length = 96

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 32/83 (38%), Positives = 51/83 (61%)
 Frame = -1

Query: 453 LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLK 274
           ++ +TF   +EDHT  N +R  L Q   + F GY++PHP++  +N+R+QTTG+PA  +LK
Sbjct: 13  ITHATFCFENEDHTLGNCLRCILLQKEGIEFAGYTVPHPTQAEINLRIQTTGEPAINILK 72

Query: 273 DGCQDLMLMCQHVRSTFEKAVND 205
           D   DL  +C  +   F  A+ +
Sbjct: 73  DSLDDLSNICTIMLDKFNDALEN 95

[99][TOP]
>UniRef100_Q4PFC9 Putative uncharacterized protein n=1 Tax=Ustilago maydis
           RepID=Q4PFC9_USTMA
          Length = 164

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-P 292
           G   D S  TF L +EDHT  NS+R+ + +DPRV FCGYS PHPSEN++++R+Q   +  
Sbjct: 26  GYEPDFSAVTFCLKEEDHTLGNSLRYIIMKDPRVEFCGYSNPHPSENKIHLRIQMYDNAS 85

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAVN 208
           A + L+D  ++L  +   +   ++++++
Sbjct: 86  ALDALRDAIENLDQLFAAIGEAYDRSLS 113

[100][TOP]
>UniRef100_C0NZW5 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Ajellomyces capsulatus G186AR RepID=C0NZW5_AJECG
          Length = 137

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDP-ACEVLKDG 268
           ++F    EDHT  N++R+ + ++P V FCGY++PHPSE ++N+R+QT        VL+ G
Sbjct: 50  ASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTFDTTNVFSVLEKG 109

Query: 267 CQDLMLMCQHVRSTFEKAVNDFK 199
             DLM +C  V  TF +A N F+
Sbjct: 110 LDDLMNLCDTVTETFIEAKNAFE 132

[101][TOP]
>UniRef100_Q54ES6 DNA-directed RNA polymerases I and III subunit rpc19 n=1
           Tax=Dictyostelium discoideum RepID=RPC19_DICDI
          Length = 116

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDG 268
           +TF   DEDHT  N++ + L ++P+V F GYSIPHPS+NR+N+R+QT  +  A E L  G
Sbjct: 36  ATFIFTDEDHTLGNALHYVLMKNPKVDFSGYSIPHPSDNRMNLRIQTKSNITAQESLLQG 95

Query: 267 CQDLMLMCQHVRSTFEKAVN 208
             D+  + +H+  TF  A++
Sbjct: 96  LTDIKDISRHIFETFNNALD 115

[102][TOP]
>UniRef100_A4RTY9 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4RTY9_OSTLU
          Length = 100

 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
 Frame = -1

Query: 450 SKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTT---GDPACEV 280
           +++TF+L  EDHT AN++R  LN +  V  CGYS+PHP +    VRVQTT   G  A   
Sbjct: 11  NEATFTLAGEDHTLANALRHALNGNADVALCGYSVPHPMKREARVRVQTTGANGTTAQGA 70

Query: 279 LKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
           ++D   D++ +C  VR  +E A   F+  +
Sbjct: 71  MRDALLDVISVCDRVREAYEDAERAFERER 100

[103][TOP]
>UniRef100_C6HHU3 DNA-directed RNA polymerase I and III n=1 Tax=Ajellomyces
           capsulatus H143 RepID=C6HHU3_AJECH
          Length = 137

 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDP-ACEVLKDG 268
           ++F    EDHT  N++R+ + ++P V FCGY++PHPSE ++N+R+QT        VL+ G
Sbjct: 50  ASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTFDTTNVFSVLEKG 109

Query: 267 CQDLMLMCQHVRSTFEKAVNDFK 199
             DLM +C  V  TF +A N F+
Sbjct: 110 LDDLMNLCDTVTETFIEAKNVFE 132

[104][TOP]
>UniRef100_A6RF11 Predicted protein n=1 Tax=Ajellomyces capsulatus NAm1
           RepID=A6RF11_AJECN
          Length = 137

 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDP-ACEVLKDG 268
           ++F    EDHT  N++R+ + ++P V FCGY++PHPSE ++N+R+QT        VL+ G
Sbjct: 50  ASFQFDKEDHTLGNALRYVIMKNPEVEFCGYTMPHPSEAKMNLRIQTFDTTNVFSVLEKG 109

Query: 267 CQDLMLMCQHVRSTFEKAVNDF 202
             DLM +C  V  TF +A N F
Sbjct: 110 LDDLMNLCDTVTETFIEAKNAF 131

[105][TOP]
>UniRef100_C8V0U1 DNA-directed RNA polymerase I and III 14 kDa polypeptide
           (AFU_orthologue; AFUA_6G04610) n=2 Tax=Emericella
           nidulans RepID=C8V0U1_EMENI
          Length = 137

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEVLKDG 268
           ++F    E HT  N++RF + ++P V FCGY+IPHPSE+++N+R+QT     A E L+ G
Sbjct: 46  ASFQFEGEGHTLGNALRFAIMKNPEVEFCGYTIPHPSESKMNIRIQTYDSTTAVEALEKG 105

Query: 267 CQDLMLMCQHVRSTFEKAVNDFKTSK 190
              LM +C  V   F  A ++F   +
Sbjct: 106 LDTLMDLCDVVTDKFTAARDEFNAEQ 131

[106][TOP]
>UniRef100_C7YQM9 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
           RepID=C7YQM9_NECH7
          Length = 147

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 32/74 (43%), Positives = 47/74 (63%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGC 265
           ++F  +DE HT  N++R+ + ++P V FC YSIPHPSE ++N+R+QT    A + LK G 
Sbjct: 59  ASFEFVDEGHTLGNALRYIVMKNPDVEFCAYSIPHPSEPKMNIRIQTYSGTAVDALKKGL 118

Query: 264 QDLMLMCQHVRSTF 223
            DL  +C  V   F
Sbjct: 119 TDLQDVCDVVADEF 132

[107][TOP]
>UniRef100_Q0UFU4 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
           RepID=Q0UFU4_PHANO
          Length = 139

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 9/90 (10%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQD--------PRVTFCGYSIPHPSENRVNVRVQT-TGDP 292
           ++F +  EDHT  N++R+ ++++        P V FCGYSIPHPSE ++N+R+QT  G  
Sbjct: 44  ASFQIDGEDHTLGNALRYIIHKNEVANTIYSPDVEFCGYSIPHPSEAKMNLRIQTYDGVS 103

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAVNDF 202
              VL+ G +DLM MC  V   F+ + +DF
Sbjct: 104 VYSVLEKGLEDLMAMCDVVEEKFKVSRDDF 133

[108][TOP]
>UniRef100_B6HGB3 Pc20g11790 protein n=1 Tax=Penicillium chrysogenum Wisconsin
           54-1255 RepID=B6HGB3_PENCW
          Length = 137

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG-DPACEVLKDG 268
           ++F    E HT  N++R+ + ++P V FCGY+IPHPS+ ++NVR+QT     A E L+ G
Sbjct: 46  ASFQFEGEGHTMGNALRYAIMKNPAVEFCGYTIPHPSDPKMNVRIQTNDTTTALEALEKG 105

Query: 267 CQDLMLMCQHVRSTFEKAVNDFKTSKTGDHMD 172
             DLM +C  V   F  A + F  +++G+ M+
Sbjct: 106 FDDLMDLCDVVTEKFTAARDQF-NAESGNRME 136

[109][TOP]
>UniRef100_A2R4K1 Contig An15c0040, complete genome n=1 Tax=Aspergillus niger CBS
           513.88 RepID=A2R4K1_ASPNC
          Length = 153

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEVLKDG 268
           ++F    E HT  N++R+ + ++P V FCGY+IPHPSE ++N+R+QT     A E L+ G
Sbjct: 62  ASFQFEGEGHTLGNALRYAIMKNPEVEFCGYTIPHPSETKMNLRIQTYETTTAVEALEKG 121

Query: 267 CQDLMLMCQHVRSTFEKAVNDFKTSKTGDHMD 172
              LM +C  V   F  A +DF  ++  D M+
Sbjct: 122 LDTLMDLCDVVTDKFTTARDDFNAAQ-ADRME 152

[110][TOP]
>UniRef100_UPI000023E4CA hypothetical protein FG06937.1 n=1 Tax=Gibberella zeae PH-1
           RepID=UPI000023E4CA
          Length = 146

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 31/74 (41%), Positives = 46/74 (62%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGC 265
           ++F   DE HT  N++R+ + ++P V FC YSIPHPSE ++N+R+QT    A + LK G 
Sbjct: 58  ASFEFTDEGHTLGNALRYIIMKNPDVEFCAYSIPHPSEPKMNIRIQTYSGTAVDALKKGL 117

Query: 264 QDLMLMCQHVRSTF 223
            D+  +C  V   F
Sbjct: 118 VDIQEVCDVVADEF 131

[111][TOP]
>UniRef100_C1BP53 DNA-directed RNA polymerases I and III subunit RPAC2 n=1
           Tax=Caligus rogercresseyi RepID=C1BP53_9MAXI
          Length = 102

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGC 265
           TF    E+HT  N++R  + Q+P V FCGYSIPHP+E+++ +R+QT    PA + L+ G 
Sbjct: 23  TFIFKGENHTLGNALRSVILQNPDVLFCGYSIPHPAEDQMPLRIQTVSSVPAQDALRRGL 82

Query: 264 QDLMLMCQHVRSTFEKAV 211
           +DL  MC  V S F  A+
Sbjct: 83  EDLKDMCSVVSSKFNSAL 100

[112][TOP]
>UniRef100_C5FRW4 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Microsporum canis CBS 113480 RepID=C5FRW4_NANOT
          Length = 144

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEVLKDG 268
           ++F    EDHT  N++R+ + ++P V FCGY++PHPSE ++N+R+QT        VL+ G
Sbjct: 56  ASFQFEGEDHTLGNALRYVIMKNPDVEFCGYTMPHPSEAKMNLRIQTYDSTNVFTVLEKG 115

Query: 267 CQDLMLMCQHVRSTFEKAVNDFKTSK 190
             DLM +C  V   F  + ++F+ SK
Sbjct: 116 LSDLMDLCDVVTEKFTLSRDNFEASK 141

[113][TOP]
>UniRef100_A4R912 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
           RepID=A4R912_MAGGR
          Length = 149

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEVLKDG 268
           ++F  + E HT  N++R+ + ++P V  C Y+IPHPSE+++N+R+QT  G  A E L+ G
Sbjct: 60  ASFEFLKEGHTMGNALRYIIMKNPEVELCAYAIPHPSEHKMNLRIQTYEGTTAIEALEKG 119

Query: 267 CQDLMLMCQHVRSTFEKAVNDF 202
            +DL  +C  V   F  A +DF
Sbjct: 120 LKDLQELCDVVTDKFTIARDDF 141

[114][TOP]
>UniRef100_B5FX73 Putative RNA polymerase I 16 kDa polypeptide n=1 Tax=Taeniopygia
           guttata RepID=B5FX73_TAEGU
          Length = 73

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
 Frame = -1

Query: 381 QDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQDLMLMCQHVRSTFEKAVND 205
           ++P V FCGY I HPSE+++N R+QT G  PA E  + G  DLM +CQHV +TFE+++ +
Sbjct: 4   KNPDVEFCGYCITHPSESKINFRIQTRGALPAVEPFRKGLNDLMGVCQHVLNTFERSMKE 63

Query: 204 FKTSK 190
           F+  K
Sbjct: 64  FRAQK 68

[115][TOP]
>UniRef100_Q2H911 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
           RepID=Q2H911_CHAGB
          Length = 155

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEVLKDG 268
           ++F  ++E HT  N++R+ + ++P V FC Y+IPHPSE ++NVR+QT  G  A E L+ G
Sbjct: 71  ASFEFLNEGHTLGNALRYIIMKNPDVEFCAYAIPHPSEPKMNVRIQTFDGTTAVEALEKG 130

Query: 267 CQDLMLMCQHVRSTFEKAVNDF 202
            +DL  +C  V   F  A   F
Sbjct: 131 LRDLQELCDVVTDEFVVAREKF 152

[116][TOP]
>UniRef100_Q7PM95 AGAP009644-PA n=1 Tax=Anopheles gambiae RepID=Q7PM95_ANOGA
          Length = 105

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = -1

Query: 450 SKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLK 274
           S  TF   DE HT  N ++  + + P V FCGY++PHP+EN+++ R+Q      A +VL+
Sbjct: 16  SSRTFVFEDEGHTLGNVLKSIICKYPDVNFCGYTVPHPAENKMHFRIQAAKSVRAIDVLR 75

Query: 273 DGCQDLMLMCQHVRSTFEKAV 211
            G +DL  +C H   TFE AV
Sbjct: 76  RGLEDLERVCDHTIDTFEAAV 96

[117][TOP]
>UniRef100_A1CM75 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Aspergillus clavatus RepID=A1CM75_ASPCL
          Length = 142

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDP-ACEVLKDG 268
           ++F    E HT  N++R+T+ ++P V FCGY+IPHPSE ++N+R+QT     A E L+ G
Sbjct: 51  ASFQFEGEGHTLGNALRYTIMKNPEVEFCGYTIPHPSEAKMNLRIQTYDTTNAVEALEKG 110

Query: 267 CQDLMLMCQHVRSTFEKAVNDFKTSK 190
            + LM +C  V   F  A + +  S+
Sbjct: 111 LEALMDLCDVVTDKFTSARDAYNASQ 136

[118][TOP]
>UniRef100_Q16F80 DNA-directed RNA polymerase I 16 kDa polypeptide n=1 Tax=Aedes
           aegypti RepID=Q16F80_AEDAE
          Length = 103

 Score = 70.9 bits (172), Expect = 6e-11
 Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGC 265
           TF   DE HT  N ++  + + P V FCGY++PHP+EN+++ R+Q   +  A ++LK G 
Sbjct: 19  TFVFEDEGHTLGNVLKSIICKYPDVNFCGYTVPHPAENKMHFRIQAARNVRAIDILKRGL 78

Query: 264 QDLMLMCQHVRSTFEKAV 211
           +DL  +C H   TFE AV
Sbjct: 79  EDLERVCDHTIETFEGAV 96

[119][TOP]
>UniRef100_A7AT13 RNA polymerase small subunit protein, putative n=1 Tax=Babesia
           bovis RepID=A7AT13_BABBO
          Length = 96

 Score = 70.9 bits (172), Expect = 6e-11
 Identities = 32/73 (43%), Positives = 46/73 (63%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TFS+ +EDHT  N+VR  L +   V F GYS+PHP +  VN+R+QTTG PA ++  +   
Sbjct: 12  TFSIENEDHTLGNAVRTLLVEREDVFFAGYSVPHPMQPEVNIRIQTTGKPAVKIFVECLD 71

Query: 261 DLMLMCQHVRSTF 223
           DL+ +C  +   F
Sbjct: 72  DLVEVCNVLTKAF 84

[120][TOP]
>UniRef100_A1DLU8 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Neosartorya fischeri NRRL 181 RepID=A1DLU8_NEOFI
          Length = 142

 Score = 70.9 bits (172), Expect = 6e-11
 Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEVLKDG 268
           ++F    E HT  N++R+ + ++P V FCGY+IPHPSE ++N+R+QT     A E L+ G
Sbjct: 51  ASFQFEGEGHTLGNALRYAIMKNPEVEFCGYTIPHPSETKMNLRIQTYDSTTAVEALEKG 110

Query: 267 CQDLMLMCQHVRSTFEKAVNDFKTSK 190
            + LM +C  V   F  A + F  ++
Sbjct: 111 LEALMDLCDVVTDKFTSARDAFNAAQ 136

[121][TOP]
>UniRef100_C1BN59 DNA-directed RNA polymerases I and III subunit RPAC2 n=1
           Tax=Caligus rogercresseyi RepID=C1BN59_9MAXI
          Length = 102

 Score = 70.5 bits (171), Expect = 8e-11
 Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGC 265
           TF    E+HT  N++R  + Q+P V FCGYSIPHP+E+++ +R+QT    P  + L+ G 
Sbjct: 23  TFIFKGENHTLGNALRSVILQNPDVLFCGYSIPHPAEDQMLLRIQTVSSVPTQDALRRGL 82

Query: 264 QDLMLMCQHVRSTFEKAV 211
           +DL  MC  V S F  A+
Sbjct: 83  EDLKDMCSVVSSKFNSAL 100

[122][TOP]
>UniRef100_B0W1R5 DNA-directed RNA polymerase I subunit D n=1 Tax=Culex
           quinquefasciatus RepID=B0W1R5_CULQU
          Length = 104

 Score = 70.5 bits (171), Expect = 8e-11
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = -1

Query: 450 SKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLK 274
           S  TF   DE HT  N ++  + +   V FCGY++PHP+EN+++ R+Q   +  A +VL+
Sbjct: 16  SSRTFVFEDEGHTLGNVLKSIICKYSDVNFCGYTVPHPAENKMHFRIQAARNVRAIDVLR 75

Query: 273 DGCQDLMLMCQHVRSTFEKAVN 208
            G +DL  +C H   TFE A+N
Sbjct: 76  RGLEDLERVCDHTIETFEAAIN 97

[123][TOP]
>UniRef100_Q0CH54 Putative uncharacterized protein n=1 Tax=Aspergillus terreus
           NIH2624 RepID=Q0CH54_ASPTN
          Length = 142

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDP-ACEVLKDG 268
           ++F    E HT  N++R+ + ++P+V FCGY+IPHPSE ++N+R+QT     A E L+ G
Sbjct: 51  ASFQFEGEGHTLGNALRYAIMKNPQVEFCGYTIPHPSETKMNLRIQTYDTTNAVEALEKG 110

Query: 267 CQDLMLMCQHVRSTFEKAVNDFKTSK 190
              LM +C  V   F  A + F  ++
Sbjct: 111 LDSLMDLCDVVTEKFTDARDAFNAAE 136

[124][TOP]
>UniRef100_B8NDQ0 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Aspergillus flavus NRRL3357 RepID=B8NDQ0_ASPFN
          Length = 142

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDP-ACEVLKDG 268
           ++F    E HT  N++R+ + ++P+V FCGY+IPHPSE ++N+R+QT     A E L+ G
Sbjct: 51  ASFQFEGEGHTLGNALRYAIMKNPQVEFCGYTIPHPSETKMNLRIQTYDTTNAVEALEKG 110

Query: 267 CQDLMLMCQHVRSTFEKAVNDFKTSK 190
              LM +C  V   F  + + F  S+
Sbjct: 111 LDSLMDLCDVVTDKFTASRDAFNASE 136

[125][TOP]
>UniRef100_UPI0000DB7285 PREDICTED: similar to CG10685-PA n=1 Tax=Apis mellifera
           RepID=UPI0000DB7285
          Length = 108

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 31/84 (36%), Positives = 47/84 (55%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF  M E +T  NS+   ++Q+P V FC   + HP+E  + +R+Q     A ++LK G +
Sbjct: 18  TFVFMGEGYTLGNSLVSVISQNPNVEFCACFVNHPAEGNIYLRIQAKRGKAIDILKKGLE 77

Query: 261 DLMLMCQHVRSTFEKAVNDFKTSK 190
           D   +C H   +F  A + FKTSK
Sbjct: 78  DFEKICDHTLESFNNAYDQFKTSK 101

[126][TOP]
>UniRef100_C9SPR1 DNA-directed RNA polymerases I and III subunit RPAC2 n=1
           Tax=Verticillium albo-atrum VaMs.102 RepID=C9SPR1_9PEZI
          Length = 146

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 31/85 (36%), Positives = 48/85 (56%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGC 265
           ++F    E HT  N++R+ + ++P V FC YSIPHPSE+ +N+R+QT    A   L  G 
Sbjct: 59  ASFEFKAEGHTLGNALRYIIMKNPDVEFCAYSIPHPSEDLMNIRIQTYDGTAVSALSKGL 118

Query: 264 QDLMLMCQHVRSTFEKAVNDFKTSK 190
           +DL  +C  +   F +  + F   K
Sbjct: 119 KDLQGLCDVMTDEFTRERDSFAVDK 143

[127][TOP]
>UniRef100_C4PY29 DNA-directed RNA polymerase I, putative n=1 Tax=Schistosoma mansoni
           RepID=C4PY29_SCHMA
          Length = 490

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 31/89 (34%), Positives = 54/89 (60%)
 Frame = -1

Query: 456 DLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVL 277
           D S++TF+   EDHT   ++R+ + +D  V+FCGY +PHP E+ +N  +Q     A + L
Sbjct: 399 DKSRATFTFFGEDHTLGLALRYCILRDESVSFCGYCVPHPLEDMINFDIQMKKGSAIDAL 458

Query: 276 KDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
           ++G Q L    QH++ TF  A+   ++++
Sbjct: 459 RNGLQCLRDCFQHMKHTFISAMKISRSTR 487

[128][TOP]
>UniRef100_C1GXH3 Predicted protein n=1 Tax=Paracoccidioides brasiliensis Pb01
           RepID=C1GXH3_PARBA
          Length = 180

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 13/97 (13%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPR------------VTFCGYSIPHPSENRVNVRVQT-T 301
           +F    EDHT  N++R+ + ++P+            V FCGY++PHPSE ++N+R+QT  
Sbjct: 83  SFQFDREDHTLGNALRYVIMKNPKFLTYSSIIRSPEVEFCGYTMPHPSEAKMNLRIQTYE 142

Query: 300 GDPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
              A  VL+ G  DLM +C  V  TF +A N F  SK
Sbjct: 143 TTTAIAVLEKGFDDLMDLCDVVTETFTEAKNAFDGSK 179

[129][TOP]
>UniRef100_B8C8G2 Small RNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana
           CCMP1335 RepID=B8C8G2_THAPS
          Length = 83

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 35/68 (51%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDP--ACEVLKDG 268
           TF L DEDHT  N++R  L  D RV F GY +PHPSE  V++RVQT   P  A E LK+ 
Sbjct: 4   TFVLGDEDHTLGNALRHVLINDARVDFAGYCVPHPSEPVVHLRVQTNEKPLTAIEALKEA 63

Query: 267 CQDLMLMC 244
           C  L   C
Sbjct: 64  CSTLSKQC 71

[130][TOP]
>UniRef100_UPI0000D55E69 PREDICTED: similar to GA10493-PA n=1 Tax=Tribolium castaneum
           RepID=UPI0000D55E69
          Length = 105

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 31/86 (36%), Positives = 47/86 (54%)
 Frame = -1

Query: 459 TDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEV 280
           TD S  TF L  E HT  N++R  ++  P V FC Y++PHP E  +++R+Q     A + 
Sbjct: 12  TDESCRTFILQGEGHTLGNALRCVISGYPDVEFCAYTVPHPMECSMHLRIQMRSGRAVDA 71

Query: 279 LKDGCQDLMLMCQHVRSTFEKAVNDF 202
           LK G +DL  +  H+   F +   +F
Sbjct: 72  LKRGLEDLAALSDHILDEFTREKQNF 97

[131][TOP]
>UniRef100_C4WWR4 ACYPI004493 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WWR4_ACYPI
          Length = 106

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEVLKDGC 265
           TF   DE HT  + + + L   P   FC YSI HPSEN++ +R++   G    ++ K G 
Sbjct: 19  TFVFEDEGHTLGSLLTYVLESFPETDFCAYSIRHPSENKIYLRLKVKNGHSVEDIFKRGF 78

Query: 264 QDLMLMCQHVRSTFEKAVNDFKTSK 190
           Q+L  +  HV+ TF KA++ ++ +K
Sbjct: 79  QELNQILNHVKKTFNKAISAYEETK 103

[132][TOP]
>UniRef100_Q5KMK6 DNA-directed RNA polymerase, putative n=1 Tax=Filobasidiella
           neoformans RepID=Q5KMK6_CRYNE
          Length = 155

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
 Frame = -1

Query: 468 GSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDP 292
           G   D S  TF+L  EDHT  N++R+ + +DP V FCGY+ PHPSE ++++R+Q      
Sbjct: 32  GHEPDYSACTFALWQEDHTLGNALRWIIMKDPEVEFCGYTAPHPSEPKIHLRIQMYENQS 91

Query: 291 ACEVLKDGCQDLMLMCQHVRSTFEKAVND 205
           A + L+    +L  +   V  ++  ++ +
Sbjct: 92  AVDCLRRALSNLRDLLNAVNDSYTSSLQN 120

[133][TOP]
>UniRef100_B0YCZ1 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=2
           Tax=Aspergillus fumigatus RepID=B0YCZ1_ASPFC
          Length = 161

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 20/105 (19%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG----------- 298
           ++F    E HT  N++R+ + ++P V FCGY+IPHPSE ++N+R+QT G           
Sbjct: 51  ASFQFEGEGHTLGNALRYAIMKNPEVEFCGYTIPHPSEAKMNLRIQTYGMYFCHTLARFD 110

Query: 297 ---------DPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
                      A E L+ G + LM +C  V   F  A + F  ++
Sbjct: 111 GADRNIADSTTAVEALEKGLEALMDLCDVVTDKFTSARDAFNAAQ 155

[134][TOP]
>UniRef100_C5KJH4 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC
           50983 RepID=C5KJH4_9ALVE
          Length = 256

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 27/46 (58%), Positives = 36/46 (78%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT 304
           T+ L +EDHT  NSVR+ L ++P+V F GYS+PHP+E  VN+RVQT
Sbjct: 10  TYQLKNEDHTLGNSVRYVLAKNPKVDFAGYSVPHPNEPFVNIRVQT 55

[135][TOP]
>UniRef100_UPI0001923CF4 PREDICTED: similar to predicted protein n=1 Tax=Hydra
           magnipapillata RepID=UPI0001923CF4
          Length = 117

 Score = 63.9 bits (154), Expect = 8e-09
 Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++M EDHT  N +R  L +DP+V F GY +PHP E++ NVR+QTT D    E       
Sbjct: 33  FTVMKEDHTLGNLIRSQLLKDPQVIFAGYRVPHPLEHKFNVRIQTTPDYSPQEAFTSAIT 92

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           DL+     +   F+ A+ + K
Sbjct: 93  DLLSEISLLEERFKSALKEKK 113

[136][TOP]
>UniRef100_B6QVD6 DNA-directed RNA polymerase I and III 14 kDa polypeptide n=1
           Tax=Penicillium marneffei ATCC 18224 RepID=B6QVD6_PENMQ
          Length = 100

 Score = 63.9 bits (154), Expect = 8e-09
 Identities = 24/51 (47%), Positives = 39/51 (76%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDP 292
           ++F   +E HT  N++R+ + ++P+V FCGY+IPHPSE ++N+R+QT G P
Sbjct: 44  ASFQFKEEGHTLGNALRYVIMKNPKVEFCGYTIPHPSEAKMNLRIQTYGIP 94

[137][TOP]
>UniRef100_Q4R9Z3 Chromosome 1 SCAF24822, whole genome shotgun sequence. (Fragment)
           n=1 Tax=Tetraodon nigroviridis RepID=Q4R9Z3_TETNG
          Length = 60

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 26/48 (54%), Positives = 36/48 (75%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           TF + DEDHT  NS+R+ + ++  V FCGY+I HPSEN++N R+QT G
Sbjct: 12  TFVMHDEDHTLGNSLRYMVMKNEDVEFCGYTITHPSENKINFRIQTRG 59

[138][TOP]
>UniRef100_A6YPS3 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1
           Tax=Triatoma infestans RepID=A6YPS3_TRIIF
          Length = 117

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACE-VLKDGCQ 262
           F++  EDHT  N +R  L +DP+V F GY +PHP + +  +R+QTT D   + VLK+   
Sbjct: 33  FTINKEDHTLGNMIRNQLLKDPKVLFAGYKVPHPLDPKFVIRIQTTNDETPQSVLKNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           DL+         F++A+ D K
Sbjct: 93  DLISELSLFEERFKEAIKDKK 113

[139][TOP]
>UniRef100_A2DKG2 RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein
           n=1 Tax=Trichomonas vaginalis G3 RepID=A2DKG2_TRIVA
          Length = 101

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
 Frame = -1

Query: 465 SYTDLSKSTFSLM--DEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD- 295
           +Y D   S+ S++   E +T  N++R T+ Q+P+V FCGY++PHP+E +V +RVQ   D 
Sbjct: 9   TYDDEKPSSGSMLFTGETYTMGNALRQTILQNPKVNFCGYTVPHPAETKVALRVQADDDE 68

Query: 294 PACEVLKDGCQDLMLMCQHVRSTFEKAVNDFK 199
              +++  G  D    C +  + F+ A + F+
Sbjct: 69  KITDIVLSGISDFKQWCNNTETEFDNAWSAFQ 100

[140][TOP]
>UniRef100_A6S183 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
           B05.10 RepID=A6S183_BOTFB
          Length = 110

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 25/49 (51%), Positives = 36/49 (73%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           ++F    EDHT  N++R+ + ++P V FCGYSIPHPSE  +N+R+QT G
Sbjct: 62  ASFEFKKEDHTLGNALRYIIMKNPDVEFCGYSIPHPSEELMNIRIQTYG 110

[141][TOP]
>UniRef100_A9RYQ0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RYQ0_PHYPA
          Length = 137

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = -1

Query: 453 LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVL 277
           ++ +TF+L  EDHT  N +R  L++DP V F GY +PHP + RV V++QT    +  +  
Sbjct: 28  MNAATFTLQREDHTIGNILRMQLHRDPSVLFAGYKLPHPLQYRVVVKIQTNSQSSPMQAY 87

Query: 276 KDGCQDLMLMCQHVRSTFE 220
                DL     H+++TFE
Sbjct: 88  NLAITDLTKELDHLKATFE 106

[142][TOP]
>UniRef100_A8B7A8 DNA-directed RNA polymerases I and III 16 kDa polypeptide n=1
           Tax=Giardia lamblia ATCC 50803 RepID=A8B7A8_GIALA
          Length = 101

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGC 265
           +TF +++EDHT  N +R+ L  +P V+F GYS+PHP+E ++N+R+Q+    A + L    
Sbjct: 6   ATFVIVNEDHTLGNCIRYCLTCNPAVSFAGYSVPHPAEPKLNLRIQSDTQSATDCLLQAA 65

Query: 264 QDLMLMCQHVRSTFEKA--VNDFKTSKTGDHMDI 169
             +  +   +R    +A  V+   +S+T ++  I
Sbjct: 66  DLMYAIASVLRQRLAEACGVSPPPSSRTSENRSI 99

[143][TOP]
>UniRef100_A5JZ41 DNA-directed RNA polymerase II 13.3 kDa polypeptide, putative n=1
           Tax=Plasmodium vivax RepID=A5JZ41_PLAVI
          Length = 126

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 28/80 (35%), Positives = 44/80 (55%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQD 259
           F++  EDHT  N ++  L QDP+VTF  Y  PHP +N + + ++  G    ++L D    
Sbjct: 38  FTIKLEDHTIGNLIKQALCQDPKVTFAAYRQPHPLQNTIEITIKPKGYAGVKLLSDNVNS 97

Query: 258 LMLMCQHVRSTFEKAVNDFK 199
           L+     +R TF+K V  +K
Sbjct: 98  LLSDVSQLRETFKKKVQRYK 117

[144][TOP]
>UniRef100_B7FZW0 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
           1055/1 RepID=B7FZW0_PHATR
          Length = 89

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
 Frame = -1

Query: 450 SKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG--------- 298
           S  TF + DEDHT  N+VR  L ++  + F GYS+PHPSE  V +RVQT           
Sbjct: 1   SSRTFCIGDEDHTLGNAVRHVLIRNNSIGFAGYSVPHPSEPVVQIRVQTVAPAGSRGQQP 60

Query: 297 DPACEVLKDGCQDLMLMCQHVRSTFEKAV 211
             A   LK  CQ L   C  V    E+ +
Sbjct: 61  PTATGALKTACQTLYDQCDIVLERLEELI 89

[145][TOP]
>UniRef100_B3LBL0 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium knowlesi
           strain H RepID=B3LBL0_PLAKH
          Length = 126

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 28/80 (35%), Positives = 44/80 (55%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQD 259
           F++  EDHT  N ++  L QDP+VTF  Y  PHP +N + + ++  G    ++L D    
Sbjct: 38  FTIKLEDHTIGNLIKQALCQDPQVTFAAYRQPHPLQNTIEITIKPKGYAGVKLLSDNVNS 97

Query: 258 LMLMCQHVRSTFEKAVNDFK 199
           L+     +R TF+K V  +K
Sbjct: 98  LLSDVSQLRETFKKKVQRYK 117

[146][TOP]
>UniRef100_Q5KMB4 DNA-directed RNA polymerase ii 13.3 kDa polypeptide, putative n=1
           Tax=Filobasidiella neoformans RepID=Q5KMB4_CRYNE
          Length = 162

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT--TGDPACEVLKD 271
           ST  +  +DHT  N +R  L  DP V F GY +PHP EN + +++QT    +PA E LK 
Sbjct: 31  STIVIRRQDHTLGNMLRAQLMLDPTVLFAGYKVPHPLENDILLKIQTDERSNPA-EALKR 89

Query: 270 GCQDLMLMCQHVRSTFEKAVNDFK 199
            C +L+    H+++ F++   + +
Sbjct: 90  ACHELIRQTVHIKAQFQQQAKNIE 113

[147][TOP]
>UniRef100_Q61IX2 Probable DNA-directed RNA polymerases I and III subunit RPAC2 n=1
           Tax=Caenorhabditis briggsae RepID=RPAC2_CAEBR
          Length = 145

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = -1

Query: 456 DLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEV 280
           D S  T  L +EDHT  NS++  L++   V FCGY++PHP E+++  RVQT  G  A EV
Sbjct: 58  DPSNLTLILYEEDHTIGNSIKHILSRMDEVEFCGYNVPHPLEDKILFRVQTKDGINALEV 117

Query: 279 LKDGCQDLMLMCQHVRSTFEKA 214
           L    + +  +   +R  FE A
Sbjct: 118 LVKAFESVEQVFSTIRGKFEAA 139

[148][TOP]
>UniRef100_Q4VBU5 Novel protein (Zgc:110005) n=1 Tax=Danio rerio RepID=Q4VBU5_DANRE
          Length = 117

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F+L  EDHT  N +R  L +DP+V F GY +PHP E++V +RVQTT D    E   +   
Sbjct: 33  FTLNKEDHTLGNIIRSQLLKDPQVLFAGYKVPHPLEHKVVIRVQTTPDYSPQEAFTNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 93  DLISELSLLEERFRVAIKD 111

[149][TOP]
>UniRef100_Q4TAB3 Chromosome undetermined SCAF7390, whole genome shotgun sequence n=1
           Tax=Tetraodon nigroviridis RepID=Q4TAB3_TETNG
          Length = 117

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F+L  EDHT  N +R  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 33  FTLNKEDHTLGNIIRAQLMKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 93  DLISELSLLEERFRVAIKD 111

[150][TOP]
>UniRef100_C6LR48 DNA-directed RNA polymerases I and III 16 kDa polypeptide n=1
           Tax=Giardia intestinalis ATCC 50581 RepID=C6LR48_GIALA
          Length = 95

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 28/64 (43%), Positives = 44/64 (68%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGC 265
           +TF +++EDHT  N +R+ LN +P V+F GYS+PHP+E ++N+R+Q+    A + L    
Sbjct: 6   ATFVIVNEDHTLGNCIRYCLNCNPDVSFAGYSVPHPAEPKLNLRIQSDIRSATDCLLQAA 65

Query: 264 QDLM 253
            DLM
Sbjct: 66  -DLM 68

[151][TOP]
>UniRef100_UPI0000019E7A UPI0000019E7A related cluster n=1 Tax=Takifugu rubripes
           RepID=UPI0000019E7A
          Length = 117

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F+L  EDHT  N +R  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 33  FTLNKEDHTLGNIIRAQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 93  DLISELSLLEERFRVAIKD 111

[152][TOP]
>UniRef100_C1BJJ1 DNA-directed RNA polymerase II subunit J n=1 Tax=Osmerus mordax
           RepID=C1BJJ1_OSMMO
          Length = 117

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F+L  EDHT  N +R  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 33  FTLNKEDHTLGNIIRSQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 93  DLISELSLLEERFRVAIKD 111

[153][TOP]
>UniRef100_C5YC44 Putative uncharacterized protein Sb06g001360 n=1 Tax=Sorghum
           bicolor RepID=C5YC44_SORBI
          Length = 117

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = -1

Query: 453 LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVL 277
           ++ ++F++  EDHT  N VR  L++DP V F GY +PHP + ++ VR+ TT   +  +  
Sbjct: 28  VNAASFTIEREDHTIGNIVRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPTQAY 87

Query: 276 KDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
                DL    ++++  FE   N F+ ++
Sbjct: 88  SQAVNDLDKELEYLKQAFEDEKNRFEMAR 116

[154][TOP]
>UniRef100_Q1E405 Putative uncharacterized protein n=1 Tax=Coccidioides immitis
           RepID=Q1E405_COCIM
          Length = 99

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 23/49 (46%), Positives = 37/49 (75%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 298
           ++F    EDHT  N++R+ + ++P V FCGY++PHPSE ++N+R+QT G
Sbjct: 45  ASFQFEGEDHTLGNALRYIIMKNPDVEFCGYTMPHPSETKMNLRIQTYG 93

[155][TOP]
>UniRef100_A8PVS2 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
           7966 RepID=A8PVS2_MALGO
          Length = 159

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDG 268
           +TF    EDHT  N +R  +   P V FCGY +PHP E RV V++QT G     EVL+  
Sbjct: 32  ATFIFNKEDHTLGNMLRHAVLAQPGVLFCGYKVPHPLEPRVLVKIQTDGSLTPAEVLQQA 91

Query: 267 CQDLMLMCQHVRSTFEKAV 211
           C  L++    ++  + K V
Sbjct: 92  CTKLIVQMGALKQGWTKEV 110

[156][TOP]
>UniRef100_P34476 Probable DNA-directed RNA polymerases I and III subunit RPAC2 n=1
           Tax=Caenorhabditis elegans RepID=RPAC2_CAEEL
          Length = 144

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -1

Query: 456 DLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACEV 280
           D S  T  + +EDHT  NS++  L++   V FCGY++PHP E+++  RVQT  G  A EV
Sbjct: 57  DPSNLTLIMYEEDHTIGNSIKHILSRMDEVEFCGYNVPHPLEDKILFRVQTKDGINALEV 116

Query: 279 LKDGCQDLMLMCQHVRSTFEKA 214
           L    + +  +   +R  FE++
Sbjct: 117 LAKAFESVEQIFSTIRGKFEES 138

[157][TOP]
>UniRef100_B5XEX2 DNA-directed RNA polymerase II subunit RPB11-a n=3 Tax=Euteleostei
           RepID=B5XEX2_SALSA
          Length = 117

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F+L  EDHT  N +R  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 33  FTLNKEDHTLGNIIRQQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 93  DLISELSLLEERFRVAIKD 111

[158][TOP]
>UniRef100_Q4UD30 DNA-directed RNA polymerase II, putative n=1 Tax=Theileria annulata
           RepID=Q4UD30_THEAN
          Length = 124

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 30/82 (36%), Positives = 48/82 (58%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF +  EDHTF + +R  L++D RVTF GY +PHP EN++ +R++T  D    V+     
Sbjct: 39  TFIVHLEDHTFGSLIRTKLSKDDRVTFVGYRMPHPLENKLEIRIRTKTDNPFTVILSAIT 98

Query: 261 DLMLMCQHVRSTFEKAVNDFKT 196
           ++     H+R+ +   +N F T
Sbjct: 99  NIRNNLSHLRNIY-MVINYFYT 119

[159][TOP]
>UniRef100_C1BLH2 DNA-directed RNA polymerase II subunit J n=1 Tax=Osmerus mordax
           RepID=C1BLH2_OSMMO
          Length = 117

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F+L  EDHT  N +R  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 33  FTLSKEDHTLGNIIRSQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  ++ D
Sbjct: 93  DLISELSLLEERFRVSIKD 111

[160][TOP]
>UniRef100_A9RFS8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RFS8_PHYPA
          Length = 117

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -1

Query: 453 LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVL 277
           ++ +TF++  EDHT  N +R  L++DP V F GY +PHP + R+ V++QTT   +  +  
Sbjct: 28  MNAATFTVEREDHTVGNVIRMQLHRDPSVLFAGYRLPHPLQYRLVVKIQTTSQSSPMQAY 87

Query: 276 KDGCQDLMLMCQHVRSTFE 220
                DL+    H+++ FE
Sbjct: 88  NLAITDLIKELDHLKAVFE 106

[161][TOP]
>UniRef100_Q4N0T0 DNA-directed RNA polymerase II, putative n=1 Tax=Theileria parva
           RepID=Q4N0T0_THEPA
          Length = 133

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 27/73 (36%), Positives = 44/73 (60%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQ 262
           TF +  EDHTF + +R  L++D RVTF GY +PHP EN++ +R++T  D    V+     
Sbjct: 39  TFIVHLEDHTFGSLIRSKLSKDDRVTFVGYRMPHPLENKLEIRIRTKTDNPFTVILSAIT 98

Query: 261 DLMLMCQHVRSTF 223
           +L     H+++ +
Sbjct: 99  NLRTNLSHLKNLY 111

[162][TOP]
>UniRef100_A8QGH1 Probable DNA-directed RNA polymerases I/III 16 kDa polypeptide,
           putative n=1 Tax=Brugia malayi RepID=A8QGH1_BRUMA
          Length = 113

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
 Frame = -1

Query: 459 TDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT-TGDPACE 283
           +D S  T  L +EDHT  NS++  L +   V FCGY++PHP E+++ +R+QT  G  A  
Sbjct: 21  SDPSNLTVILYEEDHTIGNSLKHVLCKMRDVEFCGYNVPHPLEDKILIRLQTKRGVSAAS 80

Query: 282 VLKDGCQDLMLMCQHVRSTFEKAVNDFKTS 193
           +L  G ++L  +   +R  F+ +   + T+
Sbjct: 81  MLMKGFEELECIFASIRQKFDSSYALYTTN 110

[163][TOP]
>UniRef100_UPI000180BEE7 PREDICTED: similar to polymerase (RNA) II (DNA directed)
           polypeptide J n=1 Tax=Ciona intestinalis
           RepID=UPI000180BEE7
          Length = 117

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N +R  L +DP+V F GY +PHP E++  +RVQTTGD    E   +   
Sbjct: 33  FTVNKEDHTLGNILRTQLLKDPKVLFAGYKVPHPLEHKFILRVQTTGDYSPQEAFTNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F+  V D
Sbjct: 93  DLISEISLLEERFKATVRD 111

[164][TOP]
>UniRef100_Q4XS21 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
           Tax=Plasmodium chabaudi RepID=RPB11_PLACH
          Length = 126

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 26/80 (32%), Positives = 43/80 (53%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQD 259
           F++  EDHT  N ++ +L QDP+VTF  Y  PHP +N + + ++  G    ++L D    
Sbjct: 38  FTIKLEDHTIGNLIKQSLCQDPKVTFAAYRQPHPLQNAIEITIRPKGYAGVKLLSDNVHS 97

Query: 258 LMLMCQHVRSTFEKAVNDFK 199
           ++     +R TF   V  +K
Sbjct: 98  ILNQVSTLRETFANRVQKYK 117

[165][TOP]
>UniRef100_UPI0000D5702A PREDICTED: similar to DNA-directed RNA polymerase II 13.3 kDa
           polypeptide n=1 Tax=Tribolium castaneum
           RepID=UPI0000D5702A
          Length = 117

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N +R  L +DP V F GY +PHP E++  +R+QTT D    E L +   
Sbjct: 33  FTINKEDHTLGNMIRNQLLKDPNVLFAGYKVPHPLEHKFVLRIQTTSDYSPQEALMNSIT 92

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           DL+         F++A+ + K
Sbjct: 93  DLISELSLFEERFKEAIKEKK 113

[166][TOP]
>UniRef100_UPI000194D687 PREDICTED: putative DNA directed RNA polymerase II polypeptide J
           n=1 Tax=Taeniopygia guttata RepID=UPI000194D687
          Length = 113

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 29  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAIT 88

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 89  DLISELSLLEERFRVAIKD 107

[167][TOP]
>UniRef100_UPI00015B4993 PREDICTED: similar to DNA-directed RNA polymerase II 13.3 kDa
           polypeptide n=1 Tax=Nasonia vitripennis
           RepID=UPI00015B4993
          Length = 117

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N +R  L +DP+V F GY +PHP E++  +R+QTT D    E   +   
Sbjct: 33  FTINKEDHTLGNMIRNQLLKDPQVLFAGYKLPHPLEHKFVIRIQTTSDHTPHEAFMNAVT 92

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           DL+         F++A+ + K
Sbjct: 93  DLIAELSLFEERFKEAIKEKK 113

[168][TOP]
>UniRef100_UPI0000E81348 PREDICTED: similar to Ras GTPase-activating protein 4
           (RasGAP-activating-like protein 2) (Calcium-promoted Ras
           inactivator) n=1 Tax=Gallus gallus RepID=UPI0000E81348
          Length = 763

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 679 FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAIT 738

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 739 DLISELSLLEERFRVAIKD 757

[169][TOP]
>UniRef100_UPI0000E2167E PREDICTED: similar to RAS p21 protein activator 4, partial n=1
           Tax=Pan troglodytes RepID=UPI0000E2167E
          Length = 262

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 178 FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAIT 237

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 238 DLISELSLLEERFRVAIKD 256

[170][TOP]
>UniRef100_UPI0000D9A6ED PREDICTED: similar to DNA-directed RNA polymerase II subunit J
           (DNA-directed RNA polymerase II 13.3 kDa polypeptide)
           (RPB11) n=1 Tax=Macaca mulatta RepID=UPI0000D9A6ED
          Length = 191

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 107 FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAIT 166

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 167 DLISELSLLEERFRVAIKD 185

[171][TOP]
>UniRef100_UPI00005A0EE3 PREDICTED: similar to RAS p21 protein activator 4 n=1 Tax=Canis lupus
            familiaris RepID=UPI00005A0EE3
          Length = 1108

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438  FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
            F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 1024 FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAIT 1083

Query: 261  DLMLMCQHVRSTFEKAVND 205
            DL+     +   F  A+ D
Sbjct: 1084 DLISELSLLEERFRVAIKD 1102

[172][TOP]
>UniRef100_UPI00003AB60B UPI00003AB60B related cluster n=1 Tax=Gallus gallus
           RepID=UPI00003AB60B
          Length = 100

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 16  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAIT 75

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 76  DLISELSLLEERFRVAIKD 94

[173][TOP]
>UniRef100_Q5M778 LOC496260 protein n=1 Tax=Xenopus laevis RepID=Q5M778_XENLA
          Length = 117

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 33  FTINKEDHTIGNIIKSQLLKDPQVLFAGYKVPHPLEHKIVIRVQTTPDYSPQEAFTNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 93  DLISELSLLEERFRVAIKD 111

[174][TOP]
>UniRef100_Q28CA5 Polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa n=1
           Tax=Xenopus (Silurana) tropicalis RepID=Q28CA5_XENTR
          Length = 117

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 33  FTINKEDHTIGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 93  DLISELSLLEERFRVAIKD 111

[175][TOP]
>UniRef100_A9NN58 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NN58_PICSI
          Length = 120

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
 Frame = -1

Query: 453 LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVL 277
           ++ +TF +  EDHT  N VR  L++DP V F GY +PHP + ++ +R+QTT   +  +  
Sbjct: 28  MNAATFVIEREDHTIGNIVRMQLHRDPNVLFAGYKLPHPLQYKILLRIQTTSQSSPMQAY 87

Query: 276 KDGCQDLMLMCQHVRSTFE 220
                DL     H++ +FE
Sbjct: 88  NLAIDDLDKELDHLKRSFE 106

[176][TOP]
>UniRef100_O08740 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Mus musculus
           RepID=RPB11_MOUSE
          Length = 117

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 33  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 93  DLISELSLLEERFRGAIKD 111

[177][TOP]
>UniRef100_P52435 DNA-directed RNA polymerase II subunit RPB11-a n=5 Tax=Amniota
           RepID=RPB11_HUMAN
          Length = 117

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 33  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 93  DLISELSLLEERFRVAIKD 111

[178][TOP]
>UniRef100_UPI000186CAF7 DNA-directed RNA polymerase II subunit J, putative n=1
           Tax=Pediculus humanus corporis RepID=UPI000186CAF7
          Length = 117

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N +R  L +DP V F GY +PHP E++  +R+QTT D    + L +   
Sbjct: 33  FTINKEDHTLGNMIRDQLLKDPNVLFAGYKVPHPLEHKFVLRIQTTSDYTPQDALMNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           DL+         F++A+ + K
Sbjct: 93  DLLSELSLFEERFKEAIKEKK 113

[179][TOP]
>UniRef100_Q3TYI2 Putative uncharacterized protein n=1 Tax=Mus musculus
           RepID=Q3TYI2_MOUSE
          Length = 117

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D    E   +   
Sbjct: 33  FTINKEDHTLGNIIKSQLLKDPQVLFVGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 93  DLISELSLLEERFRVAIKD 111

[180][TOP]
>UniRef100_C6SW39 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6SW39_SOYBN
          Length = 116

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = -1

Query: 453 LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVL 277
           ++ ++F++  E+HT  N +R  L++DP V F GY +PHP + ++ VR+ TT   +  +  
Sbjct: 28  INAASFTIEREEHTIGNILRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAY 87

Query: 276 KDGCQDLMLMCQHVRSTFEKAVNDF 202
                DL     H++S FE  +  F
Sbjct: 88  NQSVNDLDRELDHLKSAFEAEMLKF 112

[181][TOP]
>UniRef100_C1MHV3 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MHV3_9CHLO
          Length = 152

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 23/45 (51%), Positives = 33/45 (73%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQ 307
           TF +  EDHT  N+VR  L++DP V F GY +PHPS+NR+ ++V+
Sbjct: 32  TFVVQKEDHTLGNAVRMQLHRDPEVVFSGYQVPHPSDNRIVIKVR 76

[182][TOP]
>UniRef100_Q4PC39 Putative uncharacterized protein n=1 Tax=Ustilago maydis
           RepID=Q4PC39_USTMA
          Length = 145

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDG 268
           +TF    EDHT  N +R  +  +P V FCGY +PHP E +V V++QT G     + LK G
Sbjct: 32  ATFWFNKEDHTLGNMLRHAVLANPAVLFCGYKVPHPLEPKVFVKIQTDGSLTPTDALKQG 91

Query: 267 CQDLMLMCQHVRSTFEKAV 211
            Q L+     ++  +   V
Sbjct: 92  SQKLIAQISSLKGAWRTEV 110

[183][TOP]
>UniRef100_Q9VJE4 DNA-directed RNA polymerase II subunit RPB11 n=9 Tax=Drosophila
           RepID=RPB11_DROME
          Length = 117

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N +R  L +DP V F GY +PHP E++  +R+QTT D    E   +   
Sbjct: 33  FTINKEDHTLGNMIRNQLLKDPNVLFAGYKVPHPLEHKFVIRIQTTADYSPQEAFMNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           DL+         F+ A+ + K
Sbjct: 93  DLLAELSLFEERFKDAIKEKK 113

[184][TOP]
>UniRef100_UPI000051A5CD PREDICTED: similar to DNA-directed RNA polymerase II subunit J
           (DNA-directed RNA polymerase II 13.3 kDa polypeptide)
           (RPB11) n=1 Tax=Apis mellifera RepID=UPI000051A5CD
          Length = 117

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N +R  L +DP+V F GY +PHP E++  +R+QTT D    E       
Sbjct: 33  FTVNKEDHTLGNMIRNQLLKDPQVLFAGYKVPHPLEHKFVIRIQTTSDYTPHEAFMHAIT 92

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           DL+         F++A+ + K
Sbjct: 93  DLIAELSLFEERFKEAIKEKK 113

[185][TOP]
>UniRef100_C1EAB7 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299
           RepID=C1EAB7_9CHLO
          Length = 101

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 23/46 (50%), Positives = 32/46 (69%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT 304
           T+ +  EDHT  N VR  L++DP V F GY +PHPS+NR+ ++V T
Sbjct: 32  TYVVQKEDHTLGNIVRMQLHRDPNVVFAGYQVPHPSDNRIVIKVHT 77

[186][TOP]
>UniRef100_B9RVP3 DNA-directed RNA polymerase II 13.6 kD polypeptide, putative n=1
           Tax=Ricinus communis RepID=B9RVP3_RICCO
          Length = 156

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = -1

Query: 453 LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVL 277
           ++ ++F++  EDHT  N +R  L++D  V F GY +PHP + ++ VR+ TT   +  +  
Sbjct: 28  INAASFTVEREDHTIGNILRMQLHRDENVLFAGYRLPHPLQYKIIVRIHTTSQSSPMQAY 87

Query: 276 KDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
                DL     H++S FE+ +    T K
Sbjct: 88  NQAINDLDKELDHLKSAFEECLRPKGTKK 116

[187][TOP]
>UniRef100_Q16IF1 DNA-directed RNA polymerase II 13.3 kDa polypeptide n=1 Tax=Aedes
           aegypti RepID=Q16IF1_AEDAE
          Length = 117

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N +R  L +DP V F GY +PHP E++  +R+QTT D    E   +   
Sbjct: 33  FTVNKEDHTLGNMIRNQLLKDPNVLFAGYKLPHPLEHKFVIRIQTTSDYSPQEAFMNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           DL+         F++A  D K
Sbjct: 93  DLLSELSLFEERFKEAYKDKK 113

[188][TOP]
>UniRef100_D0A874 DNA-dependent RNA polymerases, putative n=2 Tax=Trypanosoma brucei
           RepID=D0A874_TRYBG
          Length = 134

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 32/103 (31%), Positives = 49/103 (47%)
 Frame = -1

Query: 486 LSVMEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQ 307
           L++  H      +  TFS   EDHT  N +R  + +DP VT  GY+IPHP E ++ + VQ
Sbjct: 35  LNLQRHADSESAATVTFS--HEDHTLGNPLRHVIMEDPSVTSAGYAIPHPLEAKMQLHVQ 92

Query: 306 TTGDPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSKTGDH 178
           ++ + A E +  G + L  +C     +F   V          H
Sbjct: 93  SS-EYAVETVAKGLERLAAICDETLKSFNACVEAISAEDPEGH 134

[189][TOP]
>UniRef100_Q4YZZ7 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
           Tax=Plasmodium berghei str. ANKA RepID=RPB11_PLABA
          Length = 126

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 26/80 (32%), Positives = 43/80 (53%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQD 259
           F++  EDHT  N ++ +L QDP+VTF  Y  PHP +N + + ++  G    ++L D    
Sbjct: 38  FTIKLEDHTIGNLIKQSLCQDPKVTFAAYRQPHPLQNVIEITIRPKGYAGVKLLSDNVHT 97

Query: 258 LMLMCQHVRSTFEKAVNDFK 199
           ++     +R TF   V  +K
Sbjct: 98  ILNQVSTLRETFVNKVQKYK 117

[190][TOP]
>UniRef100_UPI0000EB32C9 UPI0000EB32C9 related cluster n=1 Tax=Canis lupus familiaris
           RepID=UPI0000EB32C9
          Length = 129

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-----CEVLK 274
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D +        + 
Sbjct: 46  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAIT 105

Query: 273 DGCQDLMLMCQHVRSTFEKA 214
           D   +L L+ +  R +  KA
Sbjct: 106 DLISELSLLEERFRPSLVKA 125

[191][TOP]
>UniRef100_Q386T9 DNA-directed RNA polymerase II, putative n=2 Tax=Trypanosoma brucei
           RepID=Q386T9_9TRYP
          Length = 132

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 27/62 (43%), Positives = 40/62 (64%)
 Frame = -1

Query: 480 VMEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTT 301
           ++E  S    + S F L  EDHT AN +R  L+++P V   GY +PHP+++RV +RVQT+
Sbjct: 28  IVEEVSSKMPNSSLFKLDREDHTLANLLRMRLHENPLVHIAGYRVPHPTQHRVELRVQTS 87

Query: 300 GD 295
            D
Sbjct: 88  SD 89

[192][TOP]
>UniRef100_B0WDB4 DNA-directed RNA polymerase II subunit J n=1 Tax=Culex
           quinquefasciatus RepID=B0WDB4_CULQU
          Length = 117

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N +R  L +DP V F GY +PHP E++  +R+QTT D    E   +   
Sbjct: 33  FTVNKEDHTLGNMIRNQLLKDPNVLFAGYKLPHPLEHKFVIRIQTTSDYSPQEAFMNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           DL+         F +A  D K
Sbjct: 93  DLLSELSLFEERFREAYKDKK 113

[193][TOP]
>UniRef100_Q7RMJ5 RNA polymerases L / 13 to 16 kDa subunit, putative (Fragment) n=1
           Tax=Plasmodium yoelii yoelii RepID=Q7RMJ5_PLAYO
          Length = 117

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 28/91 (30%), Positives = 49/91 (53%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQD 259
           F++  EDHT  N ++ +L QDP+VTF  Y  PHP +N + + ++  G    ++L D    
Sbjct: 14  FTIKLEDHTLGNLIKQSLCQDPKVTFAAYRQPHPLQNEIEITIRPKGYAGVKLLSDNVHT 73

Query: 258 LMLMCQHVRSTFEKAVNDFKTSKTGDHMDIV 166
           ++     +R TF   +   K +KT   ++I+
Sbjct: 74  ILNQVSTLRETF-VVITLMKKNKTRRKLNIL 103

[194][TOP]
>UniRef100_Q2HQ74 RNA polymerase I subunit RPC19 n=1 Tax=Trypanosoma brucei brucei
           RepID=Q2HQ74_TRYBB
          Length = 134

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 32/103 (31%), Positives = 48/103 (46%)
 Frame = -1

Query: 486 LSVMEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQ 307
           L++  H      +  TFS   EDHT  N +R  + +DP VT  GY+IPHP E ++ + VQ
Sbjct: 35  LNLQRHADSESAATVTFS--HEDHTLGNPLRHVIMEDPSVTSAGYAIPHPLEAKMQLHVQ 92

Query: 306 TTGDPACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSKTGDH 178
           ++ + A E +  G + L  +C      F   V          H
Sbjct: 93  SS-EYAVETVAKGLERLAAICDETLKKFNACVEAISAEDPEGH 134

[195][TOP]
>UniRef100_A4I2U7 DNA-directed RNA polymerase II-like protein n=1 Tax=Leishmania
           infantum RepID=A4I2U7_LEIIN
          Length = 134

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
 Frame = -1

Query: 480 VMEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTT 301
           ++E  S T  + S F +  EDHT AN +R  L++ P V   GY +PHP+++ V +RVQT 
Sbjct: 28  IVEQISNTMANSSLFKMEKEDHTLANLLRMKLHESPFVQIAGYRVPHPTKHNVELRVQTA 87

Query: 300 G---DPACEVLKDGCQDLMLMCQHVRSTFEK 217
               D      K   QD +  C      FE+
Sbjct: 88  SNGTDAPVPAPKKALQDAINGCLKDLEVFEE 118

[196][TOP]
>UniRef100_C1BF62 DNA-directed RNA polymerase II subunit J n=1 Tax=Oncorhynchus
           mykiss RepID=C1BF62_ONCMY
          Length = 117

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F+L  EDHT  N ++  L +DP+V F GY +PHP E++  +RVQTT D    E   +   
Sbjct: 33  FTLNKEDHTLGNIIKQQLLKDPQVLFAGYKVPHPLEHKTVIRVQTTPDYSPQEAFTNVIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F  A+ D
Sbjct: 93  DLISELSLLEERFRVAIKD 111

[197][TOP]
>UniRef100_Q4FYG3 DNA-directed RNA polymerase II-like protein n=1 Tax=Leishmania
           major strain Friedlin RepID=Q4FYG3_LEIMA
          Length = 134

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
 Frame = -1

Query: 480 VMEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTT 301
           ++E  S T  + S F +  EDHT AN +R  L++ P V   GY +PHP+++ V +RVQT 
Sbjct: 28  IVEQISNTMANSSLFKMEKEDHTLANLLRMKLHESPFVQIAGYRVPHPTKHNVELRVQTA 87

Query: 300 G---DPACEVLKDGCQDLMLMCQHVRSTFEK 217
               D      K   QD +  C      FE+
Sbjct: 88  SNGTDAPVPAPKKALQDAVDGCLKDLEVFEE 118

[198][TOP]
>UniRef100_Q4E3C1 Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi
           RepID=Q4E3C1_TRYCR
          Length = 133

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
 Frame = -1

Query: 450 SKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVL-- 277
           + S F L  EDHT AN +R  L++D  V   GY +PHP+++RV +RVQT+ D +   +  
Sbjct: 39  NSSLFKLDKEDHTLANLLRMKLHEDALVHIAGYRVPHPTQHRVELRVQTSSDGSGRPIPS 98

Query: 276 -KDGCQDLMLMCQHVRSTFEK 217
            KD     +  C     +FE+
Sbjct: 99  PKDALLKAIDACMQDLQSFEE 119

[199][TOP]
>UniRef100_Q4DI42 Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi
           RepID=Q4DI42_TRYCR
          Length = 133

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
 Frame = -1

Query: 450 SKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVL-- 277
           + S F L  EDHT AN +R  L++D  V   GY +PHP+++RV +RVQT+ D +   +  
Sbjct: 39  NSSLFKLDKEDHTLANLLRMKLHEDALVHIAGYRVPHPTQHRVELRVQTSSDGSGRPIPS 98

Query: 276 -KDGCQDLMLMCQHVRSTFEK 217
            KD     +  C     +FE+
Sbjct: 99  PKDALLKAIDACMQDLQSFEE 119

[200][TOP]
>UniRef100_Q4DBQ7 DNA-directed RNA polymerase I/III subunit, putative n=1
           Tax=Trypanosoma cruzi RepID=Q4DBQ7_TRYCR
          Length = 134

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 30/81 (37%), Positives = 45/81 (55%)
 Frame = -1

Query: 450 SKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKD 271
           S  T +   EDHT  N +R  L Q+  VT  GY+IPHP E ++ + VQ+T D A E + +
Sbjct: 45  STVTIAFSHEDHTLGNPLRHVLMQNREVTSAGYAIPHPLEAKMLLHVQST-DYAVEAVAE 103

Query: 270 GCQDLMLMCQHVRSTFEKAVN 208
           G + L  +C     +FE  ++
Sbjct: 104 GLERLASICDETLQSFEDCMH 124

[201][TOP]
>UniRef100_Q4D7H8 DNA-dependent RNA polymerases, putative n=1 Tax=Trypanosoma cruzi
           RepID=Q4D7H8_TRYCR
          Length = 134

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 30/81 (37%), Positives = 45/81 (55%)
 Frame = -1

Query: 450 SKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKD 271
           S  T +   EDHT  N +R  L Q+  VT  GY+IPHP E ++ + VQ+T D A E + +
Sbjct: 45  STVTIAFSHEDHTLGNPLRHVLMQNREVTSAGYAIPHPLEAKMLLHVQST-DYAVEAVAE 103

Query: 270 GCQDLMLMCQHVRSTFEKAVN 208
           G + L  +C     +FE  ++
Sbjct: 104 GLERLASICDETLQSFEDCMH 124

[202][TOP]
>UniRef100_Q29MR4 GA19897 n=2 Tax=pseudoobscura subgroup RepID=Q29MR4_DROPS
          Length = 117

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N +R  L +DP V F GY +PHP E++  +R+QTT +    E   +   
Sbjct: 33  FTINKEDHTLGNMIRNQLLKDPNVLFAGYKVPHPLEHKFVIRIQTTAEYSPQEAFMNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           DL+         F+ A+ + K
Sbjct: 93  DLLAELSLFEERFKDAIKEKK 113

[203][TOP]
>UniRef100_B3S6B1 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
           RepID=B3S6B1_TRIAD
          Length = 116

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPAC-EVLKDGCQ 262
           F++  EDHT  N +R  L +DP+V F GY +PHP E  V +RVQTT + +  E   +   
Sbjct: 33  FTIAKEDHTLGNIIRAQLLKDPQVIFAGYKVPHPLEYDVVIRVQTTSNYSPEEAFSNALT 92

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           DL+     +   F+ AV + K
Sbjct: 93  DLISELNVLDDRFKAAVREKK 113

[204][TOP]
>UniRef100_Q8IER7 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
           Tax=Plasmodium falciparum 3D7 RepID=RPB11_PLAF7
          Length = 126

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 24/84 (28%), Positives = 43/84 (51%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKDGCQD 259
           F +  EDHT  N ++  L QDP+V F  Y  PHP +N + + ++  G    ++L D   +
Sbjct: 38  FVIKLEDHTIGNLIKIQLCQDPKVLFAAYRQPHPLQNAIEITIKPKGYAGVKLLSDNVNN 97

Query: 258 LMLMCQHVRSTFEKAVNDFKTSKT 187
           ++     ++  F K +  +K S +
Sbjct: 98  ILSQVATLKENFAKKIQKYKESNS 121

[205][TOP]
>UniRef100_UPI0000E21685 PREDICTED: RAS p21 protein activator 4 isoform 2 n=1 Tax=Pan
           troglodytes RepID=UPI0000E21685
          Length = 576

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D
Sbjct: 450 FTINKEDHTLGNIIKTQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPD 497

[206][TOP]
>UniRef100_UPI00005EC058 PREDICTED: similar to RNA polymerase II isoform 2 n=1
           Tax=Monodelphis domestica RepID=UPI00005EC058
          Length = 128

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D
Sbjct: 33  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPD 80

[207][TOP]
>UniRef100_UPI00001F2CA1 polymerase (RNA) II (DNA directed) polypeptide J n=1 Tax=Mus
           musculus RepID=UPI00001F2CA1
          Length = 111

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D
Sbjct: 33  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPD 80

[208][TOP]
>UniRef100_UPI0001AE70B6 UPI0001AE70B6 related cluster n=1 Tax=Homo sapiens
           RepID=UPI0001AE70B6
          Length = 180

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D
Sbjct: 54  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPD 101

[209][TOP]
>UniRef100_UPI000020F7F2 DNA directed RNA polymerase II polypeptide J-related n=1 Tax=Homo
           sapiens RepID=UPI000020F7F2
          Length = 115

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D
Sbjct: 32  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPD 79

[210][TOP]
>UniRef100_UPI0000163C17 UPI0000163C17 related cluster n=1 Tax=Homo sapiens
           RepID=UPI0000163C17
          Length = 158

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D
Sbjct: 32  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPD 79

[211][TOP]
>UniRef100_B4FJS1 DNA-directed RNA polymerase II subunit J n=1 Tax=Zea mays
           RepID=B4FJS1_MAIZE
          Length = 120

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = -1

Query: 453 LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVL 277
           ++ ++F++  EDHT  N +R  L++DP V F GY +PHP + ++ VR+ TT   +  +  
Sbjct: 28  VNAASFTVEREDHTVGNILRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPTQAY 87

Query: 276 KDGCQDLMLMCQHVRSTFEKAVNDFK 199
                DL    ++++  FE   N ++
Sbjct: 88  TQAINDLDKELEYLKQAFEDEKNRYE 113

[212][TOP]
>UniRef100_C4WRJ5 ACYPI008208 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WRJ5_ACYPI
          Length = 117

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N +R  L +DP V F GY  PHP E++  +R+QTT D    + L +   
Sbjct: 33  FTVNKEDHTLGNMIRNQLLKDPNVLFAGYKQPHPLEHKFELRIQTTSDYTPQDALTNSIT 92

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           DL+         F++A+ + K
Sbjct: 93  DLLAELSLFEERFKEALREKK 113

[213][TOP]
>UniRef100_A9V2R7 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V2R7_MONBE
          Length = 119

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGC 265
           TF +  EDHT  N +   L +DPRV F GY +PHP E+ + +RV TT      E LK   
Sbjct: 32  TFRMNREDHTVGNLLASQLAKDPRVLFAGYKVPHPLEHYILLRVHTTAQYSPKEALKQAL 91

Query: 264 QDLMLMCQHVRSTFEK 217
            D++    H++S+  +
Sbjct: 92  HDVIYDVAHLQSSLRE 107

[214][TOP]
>UniRef100_Q9H1A6 RPB11a protein n=1 Tax=Homo sapiens RepID=Q9H1A6_HUMAN
          Length = 127

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D
Sbjct: 33  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPD 80

[215][TOP]
>UniRef100_Q8TDE6 DNA-directed RNA polymerase II subunit 11 n=1 Tax=Homo sapiens
           RepID=Q8TDE6_HUMAN
          Length = 158

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D
Sbjct: 32  FTMNKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPD 79

[216][TOP]
>UniRef100_Q59FR2 MGC13098 protein variant (Fragment) n=1 Tax=Homo sapiens
           RepID=Q59FR2_HUMAN
          Length = 180

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D
Sbjct: 54  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPD 101

[217][TOP]
>UniRef100_A6NK79 Putative uncharacterized protein POLR2J n=1 Tax=Homo sapiens
           RepID=A6NK79_HUMAN
          Length = 116

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D
Sbjct: 33  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPD 80

[218][TOP]
>UniRef100_A6NFM0 Putative uncharacterized protein POLR2J2 n=1 Tax=Homo sapiens
           RepID=A6NFM0_HUMAN
          Length = 158

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D
Sbjct: 32  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPD 79

[219][TOP]
>UniRef100_Q9H1A7 DNA-directed RNA polymerase II subunit RPB11-b2 n=1 Tax=Homo
           sapiens RepID=RPB1C_HUMAN
          Length = 115

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D
Sbjct: 32  FTMNKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPD 79

[220][TOP]
>UniRef100_Q9GZM3 DNA-directed RNA polymerase II subunit RPB11-b1 n=1 Tax=Homo
           sapiens RepID=RPB1B_HUMAN
          Length = 115

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N ++  L +DP+V F GY +PHP E+++ +RVQTT D
Sbjct: 32  FTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPD 79

[221][TOP]
>UniRef100_A8HRP7 DNA-directed RNA polymerase II, 13.6 kDa polypeptide n=1
           Tax=Chlamydomonas reinhardtii RepID=A8HRP7_CHLRE
          Length = 115

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACE-VLKDGC 265
           TF+   EDHT  N +R  L+ D    F GY IPHP E  + V+VQT G  +CE  +    
Sbjct: 32  TFTFRSEDHTIGNLLRMQLHADKSTVFAGYRIPHPLEPVMVVKVQTNGTKSCEDAMMHAL 91

Query: 264 QDLMLMCQHVRSTFEKAVN 208
           +DL      +   F++AV+
Sbjct: 92  EDLANEYHIMLEEFDQAVS 110

[222][TOP]
>UniRef100_Q2U9C5 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae
           RepID=Q2U9C5_ASPOR
          Length = 152

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQD----------PRVTFCGYSIPHPSENRVNVRVQTTGD 295
           ++F    E HT  N++R+ + +             V FCGY+IPHPSE ++N+R+QT   
Sbjct: 51  ASFQFEGEGHTLGNALRYAIMKKCVLLFIVSVVDIVEFCGYTIPHPSETKMNLRIQTYDT 110

Query: 294 P-ACEVLKDGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
             A E L+ G   LM +C  V   F  + + F  S+
Sbjct: 111 TNAVEALEKGLDSLMDLCDVVTDKFTASRDAFNASE 146

[223][TOP]
>UniRef100_B8C993 Probable dna-directed RNA polymerase II 13.6 kDa polypeptide n=1
           Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C993_THAPS
          Length = 124

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA--CEVLKDG 268
           TF+   EDHT AN +R  L +DP V F GY  PHP  +++++++QTT       E L   
Sbjct: 32  TFTFNKEDHTVANLLRMQLLRDPAVKFAGYMHPHPLIHKIHLKIQTTTSQVAPAETLSAA 91

Query: 267 CQDLMLMCQHVRSTFEKAVNDFK 199
            +DL     H+ +    A++ +K
Sbjct: 92  IEDLSNETDHLLTQVTDAIDKWK 114

[224][TOP]
>UniRef100_Q7RG92 RNA polymerases L / 13 to 16 kDa subunit n=1 Tax=Plasmodium yoelii
           yoelii RepID=Q7RG92_PLAYO
          Length = 92

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
 Frame = -1

Query: 477 MEHGSYTD----LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRV 310
           ME   Y+     ++ +TF   +EDHT  N +R  L Q   + F GY++PHP++  +N+R+
Sbjct: 1   MEENLYSQNLKTITHATFCFENEDHTLGNCLRCILLQKEGIEFAGYTVPHPTQAEINLRI 60

Query: 309 QTTG 298
           QTTG
Sbjct: 61  QTTG 64

[225][TOP]
>UniRef100_B7PS85 RNA polymerases L, putative n=1 Tax=Ixodes scapularis
           RepID=B7PS85_IXOSC
          Length = 117

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVLKDGCQ 262
           F++  EDHT  N +R  L +DP V F GY +PHP E++  +RVQTT D    E   +   
Sbjct: 33  FTVNKEDHTLGNMIRAQLLKDPCVLFAGYKVPHPLEHKFILRVQTTPDSTPQEAFTNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F+++V +
Sbjct: 93  DLISELSLLEERFKESVRE 111

[226][TOP]
>UniRef100_A4HFT2 DNA-directed RNA polymerase II-like protein n=1 Tax=Leishmania
           braziliensis RepID=A4HFT2_LEIBR
          Length = 134

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
 Frame = -1

Query: 480 VMEHGSYTDLSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTT 301
           ++E  S T  + S F +  EDHT AN +R  L++ P V   GY +PHP+++ V +RVQT 
Sbjct: 28  IVEQISNTMANSSLFKMEKEDHTLANLLRMKLHESPFVQIAGYRVPHPTKHNVELRVQTG 87

Query: 300 G---DPACEVLKDGCQDLMLMCQHVRSTFEK 217
               D      K   QD +  C      FE+
Sbjct: 88  SNGTDTPIPAPKKALQDAIDGCLKDLEMFEE 118

[227][TOP]
>UniRef100_Q9XVH6 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
           Tax=Caenorhabditis elegans RepID=RPB11_CAEEL
          Length = 122

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVLKDGCQ 262
           F++M EDHT  N ++  L +DP V F GY  PHP E+++ +R+QTT +    + L     
Sbjct: 32  FTIMKEDHTLGNMLKIQLLKDPEVLFAGYKNPHPLEHKILLRIQTTNNTTPADALTTAIT 91

Query: 261 DLMLMCQHVRSTFEKAVNDFKTSKTGD 181
           DL+     +    + A+   K +++GD
Sbjct: 92  DLVGELSLLEHRIDAAIK--KCTQSGD 116

[228][TOP]
>UniRef100_B6AF09 RNA polymerase II subunit RPB11, putative n=1 Tax=Cryptosporidium
           muris RN66 RepID=B6AF09_9CRYT
          Length = 121

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQT--TGDPACEVLKDG 268
           +F +M EDHT  N +R  L +DP V F  Y +PHP E  V +R+QT  T  P    +++ 
Sbjct: 37  SFMIMLEDHTLGNLLRTQLLRDPSVIFAAYKVPHPLEPMVQIRIQTRETTTPFV-AMQNA 95

Query: 267 CQDLMLMCQHVRSTFEKAVNDFKT 196
            Q ++   Q V +TF+ A+ +  T
Sbjct: 96  IQMILAETQTVANTFKDAMRNHPT 119

[229][TOP]
>UniRef100_B7FGH5 Putative uncharacterized protein n=1 Tax=Medicago truncatula
           RepID=B7FGH5_MEDTR
          Length = 116

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = -1

Query: 453 LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVL 277
           ++ ++F++  EDHT  N +R  L++DP V F GY +PHP + ++ +R+ TT   +  +  
Sbjct: 28  INAASFTIEREDHTIGNILRMQLHKDPNVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAY 87

Query: 276 KDGCQDLMLMCQHVRSTFEKAVNDF 202
                DL      ++S FE  +  F
Sbjct: 88  NQSINDLDKELDTLKSGFEAELLKF 112

[230][TOP]
>UniRef100_Q60SM4 Probable DNA-directed RNA polymerase II subunit RPB11 n=1
           Tax=Caenorhabditis briggsae RepID=RPB11_CAEBR
          Length = 122

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTT-----GDPACEVLK 274
           F++  EDHT  N ++  L +DP V F GY  PHP E+++ +RVQTT      D     + 
Sbjct: 32  FTINKEDHTLGNMLKIQLLKDPEVLFAGYKNPHPLEHKILLRVQTTNATTPADALTTAIT 91

Query: 273 DGCQDLMLMCQHVRSTFEKAVNDFKTSK 190
           D   +L L+   + S  +K      T +
Sbjct: 92  DLVGELSLLEHRIDSAIKKCTQSTDTER 119

[231][TOP]
>UniRef100_Q38859 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Arabidopsis
           thaliana RepID=RPB11_ARATH
          Length = 116

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = -1

Query: 453 LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVL 277
           ++ ++F++  EDHT  N VR  L++D  V F GY +PHP + ++ VR+ TT   +  +  
Sbjct: 28  INAASFTVEREDHTIGNIVRMQLHRDENVLFAGYQLPHPLKYKIIVRIHTTSQSSPMQAY 87

Query: 276 KDGCQDLMLMCQHVRSTFEKAVNDF 202
                DL     ++++ FE  V  F
Sbjct: 88  NQAINDLDKELDYLKNQFEAEVAKF 112

[232][TOP]
>UniRef100_UPI0001868C2E hypothetical protein BRAFLDRAFT_286064 n=1 Tax=Branchiostoma
           floridae RepID=UPI0001868C2E
          Length = 116

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N +R  L +DP+V F GY +PHP E++  +R+QTT D    E   +   
Sbjct: 33  FTVNKEDHTLGNLLRAQLLKDPQVIFAGYKVPHPLEHKFVLRLQTTPDYSPQEAFTNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVND 205
           DL+     +   F+ AV +
Sbjct: 93  DLISEVSLLEERFKVAVRE 111

[233][TOP]
>UniRef100_C5X6I3 Putative uncharacterized protein Sb02g000210 n=1 Tax=Sorghum
           bicolor RepID=C5X6I3_SORBI
          Length = 120

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = -1

Query: 453 LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVL 277
           ++ ++F++  EDHT  N +R  L++DP V F GY +PHP + ++ VR+ T    +  +  
Sbjct: 28  VNAASFTVEREDHTVGNILRMQLHRDPNVLFAGYKLPHPLQYKIIVRIHTMSQSSPTQAY 87

Query: 276 KDGCQDLMLMCQHVRSTFEKAVNDFK 199
                DL    ++++  FE   N ++
Sbjct: 88  SQAVNDLDKELEYLKQAFEDEKNRYE 113

[234][TOP]
>UniRef100_A9PCB4 Predicted protein n=1 Tax=Populus trichocarpa RepID=A9PCB4_POPTR
          Length = 116

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 453 LSKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVL 277
           ++ ++F++  EDHT  N +R  L++D  V F GY +PHP + ++ VR+ TT   +  +  
Sbjct: 28  INAASFTVEREDHTIGNILRMQLHRDDNVLFAGYKLPHPLKYKIIVRIHTTSQSSPMQAY 87

Query: 276 KDGCQDLMLMCQHVRSTFE 220
                DL     H+++ FE
Sbjct: 88  NQAINDLDKELDHLKNAFE 106

[235][TOP]
>UniRef100_Q7PVQ9 DNA-directed RNA polymerase II subunit RPB11 n=1 Tax=Anopheles
           gambiae RepID=RPB11_ANOGA
          Length = 117

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLKDGCQ 262
           F++  EDHT  N +R  L +DP V F GY +PHP E++  +R+QTT +    E   +   
Sbjct: 33  FTVNKEDHTLGNMIRNQLLKDPNVLFAGYKLPHPLEHKFVLRIQTTSEYSPHEAFMNAIT 92

Query: 261 DLMLMCQHVRSTFEKAVNDFK 199
           DL+         F +A+ + K
Sbjct: 93  DLLSELSLFEERFREAMKEKK 113

[236][TOP]
>UniRef100_UPI0000E4A5EB PREDICTED: similar to RNA polymerase II subunit n=1
           Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A5EB
          Length = 117

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 24/48 (50%), Positives = 33/48 (68%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N +R  L +DP+V F GY +PHP E++  +RVQTT D
Sbjct: 33  FTVNKEDHTLGNILRAQLLKDPQVLFAGYKVPHPLEHKFVLRVQTTPD 80

[237][TOP]
>UniRef100_UPI0000E49F0F PREDICTED: similar to RNA polymerase II subunit, partial n=1
           Tax=Strongylocentrotus purpuratus RepID=UPI0000E49F0F
          Length = 99

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 24/48 (50%), Positives = 33/48 (68%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N +R  L +DP+V F GY +PHP E++  +RVQTT D
Sbjct: 15  FTVNKEDHTLGNILRAQLLKDPQVLFAGYKVPHPLEHKFVLRVQTTPD 62

[238][TOP]
>UniRef100_Q69G41 RNA polymerase II subunit n=1 Tax=Branchiostoma belcheri
           RepID=Q69G41_BRABE
          Length = 135

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 24/48 (50%), Positives = 33/48 (68%)
 Frame = -1

Query: 438 FSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           F++  EDHT  N +R  L +DP+V F GY +PHP E++  +RVQTT D
Sbjct: 33  FTVNKEDHTLGNLLRAQLLKDPQVIFAGYKVPHPLEHKFVLRVQTTPD 80

[239][TOP]
>UniRef100_Q86JJ5 DNA-directed RNA polymerase II subunit rpb11 n=1 Tax=Dictyostelium
           discoideum RepID=RPB11_DICDI
          Length = 120

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 22/50 (44%), Positives = 32/50 (64%)
 Frame = -1

Query: 444 STFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD 295
           S F+++ EDHT  N +R  L  D  + F GY +PHP E+ VN+R+QT  +
Sbjct: 31  SMFTILKEDHTIGNLIRMQLIADQDIIFAGYRMPHPLEHNVNIRIQTNNN 80

[240][TOP]
>UniRef100_C5LKR8 DNA-directed RNA polymerase II, putative n=1 Tax=Perkinsus marinus
           ATCC 50983 RepID=C5LKR8_9ALVE
          Length = 149

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVLKDGC 265
           TF++  EDHT A+++R  L ++ +V F GY +PHP EN++ +RVQ T      E +K+  
Sbjct: 49  TFTIWLEDHTAAHALRSELLRNRQVKFAGYKVPHPLENKLLMRVQVTSQTTPVEAMKEAL 108

Query: 264 QDLMLMCQHVRSTFEKAVNDFK 199
           + L      +   F++++  ++
Sbjct: 109 KSLRSKGDQLEKEFDRSLKAYQ 130

[241][TOP]
>UniRef100_C5KDT1 DNA-directed RNA polymerase II, putative n=1 Tax=Perkinsus marinus
           ATCC 50983 RepID=C5KDT1_9ALVE
          Length = 149

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPA-CEVLKDGC 265
           TF++  EDHT A+++R  L ++ +V F GY +PHP EN++ +RVQ T      E +K+  
Sbjct: 49  TFTIWLEDHTAAHALRSELLRNRQVKFAGYKVPHPLENKLLMRVQVTSQTTPVEAMKEAL 108

Query: 264 QDLMLMCQHVRSTFEKAVNDFK 199
           + L      +   F++++  ++
Sbjct: 109 KSLRSKGDQLEKEFDRSLKAYQ 130

[242][TOP]
>UniRef100_A7ELB7 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
           1980 UF-70 RepID=A7ELB7_SCLS1
          Length = 124

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = -1

Query: 450 SKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD-PACEVLK 274
           + S F+   EDHT AN +R  L +DP V F GY IPHP  ++  +R+QT G+    E L 
Sbjct: 30  NSSIFTFNKEDHTLANMLRAHLLKDPHVIFSGYKIPHPLFSKFELRIQTDGEITPKEALV 89

Query: 273 DGCQDLM 253
             C++L+
Sbjct: 90  ACCRNLV 96

[243][TOP]
>UniRef100_B7G3C7 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
           RepID=B7G3C7_PHATR
          Length = 125

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGD--PACEVLKDG 268
           TF L  EDHT  N +R  L +DP V F GY  PHP  N + ++VQT        EVL + 
Sbjct: 34  TFRLNKEDHTVLNLLRMQLLRDPGVRFAGYIHPHPLINYMELKVQTNSSHTSPTEVLSNA 93

Query: 267 CQDLMLMCQHVRSTFEKAVNDFK 199
            +DL     H+    + A+ +++
Sbjct: 94  IEDLGSETDHLLKEVQNAMENWR 116

[244][TOP]
>UniRef100_A4HGR0 DNA-directed RNA polymerase-like protein n=1 Tax=Leishmania
           braziliensis RepID=A4HGR0_LEIBR
          Length = 137

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 29/80 (36%), Positives = 44/80 (55%)
 Frame = -1

Query: 450 SKSTFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEVLKD 271
           S +  +   EDHT  N +R  L Q+  VT  GY+IPHP E ++ + VQ + D A E +  
Sbjct: 46  STAVVTFSHEDHTLGNPLRHVLMQNVAVTSAGYAIPHPLEPKMLLHVQAS-DYAVEAVAH 104

Query: 270 GCQDLMLMCQHVRSTFEKAV 211
           G + L  +C    S+F+K +
Sbjct: 105 GLERLAEICDDTISSFDKCM 124

[245][TOP]
>UniRef100_A3FPR0 RNA polymerase II, putative n=1 Tax=Cryptosporidium parvum Iowa II
           RepID=A3FPR0_CRYPV
          Length = 115

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
 Frame = -1

Query: 441 TFSLMDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTGDPACEV-LKDGC 265
           +F +M EDHT  N +   L +DP V F GY +PHP E  V +R+QT  +    V +++  
Sbjct: 31  SFMIMLEDHTLGNLITTQLLRDPNVIFAGYKVPHPLEPLVQIRIQTRENTTPFVAIQNAI 90

Query: 264 QDLMLMCQHVRSTFEKAVNDFKTSK 190
           + + +  Q + ++F+ ++ ++   K
Sbjct: 91  KSIQMESQVILNSFKDSMRNYPIYK 115