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[1][TOP]
>UniRef100_B7FJE4 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FJE4_MEDTR
Length = 241
Score = 289 bits (740), Expect = 9e-77
Identities = 153/192 (79%), Positives = 168/192 (87%), Gaps = 4/192 (2%)
Frame = +1
Query: 1 FTHKTTTPLSALPISKPP-LNLTLSSPSSSSSQTATVRTRAGWFSGLTDN---KKKMNLP 168
FT +TTTP S P SKPP L LTLSS SSSQ AT+RTRAG+F G T + KKKM+LP
Sbjct: 23 FTLQTTTPFSLSPFSKPPPLTLTLSS---SSSQNATIRTRAGFFFGRTKDDKKKKKMDLP 79
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
DTVKAGDPVLHEPAQE+DPSEI S+KVQKIIDDMIRVMRKAPGVGLAAPQIG+ SRIIVL
Sbjct: 80 DTVKAGDPVLHEPAQEVDPSEIMSDKVQKIIDDMIRVMRKAPGVGLAAPQIGVSSRIIVL 139
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
EDT+E+ISYAPKE +KAQDR PFDLLVI+NPKLK+ S +TALFFEGCLSVDGFRAVVER+
Sbjct: 140 EDTEEFISYAPKEVLKAQDRHPFDLLVILNPKLKSTSKRTALFFEGCLSVDGFRAVVERH 199
Query: 529 LDVEVTGLDSNG 564
LDVEVTGLD NG
Sbjct: 200 LDVEVTGLDRNG 211
[2][TOP]
>UniRef100_B9RV35 Polypeptide deformylase, putative n=1 Tax=Ricinus communis
RepID=B9RV35_RICCO
Length = 266
Score = 262 bits (669), Expect = 2e-68
Identities = 131/190 (68%), Positives = 154/190 (81%)
Frame = +1
Query: 7 HKTTTPLSALPISKPPLNLTLSSPSSSSSQTATVRTRAGWFSGLTDNKKKMNLPDTVKAG 186
H L+ +PISKP T+ + S +++ +AGW GL +NKK M+LPD VKAG
Sbjct: 26 HHPIYRLTRIPISKPDFRTTIPYSITRKSLSSSSIAKAGWLLGLGENKK-MSLPDIVKAG 84
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEY 366
DPVLHEPA+E+DP EI SE++QKIIDDM++VMR+APGVGLAAPQIG+P RIIVLEDT EY
Sbjct: 85 DPVLHEPAREVDPDEIGSERIQKIIDDMVKVMRRAPGVGLAAPQIGVPLRIIVLEDTTEY 144
Query: 367 ISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVT 546
I YAPKEE KAQDRRPFDLLVI+NPKLK K N+TALFFEGCLSVDGFRAVVER L+VEV+
Sbjct: 145 IGYAPKEETKAQDRRPFDLLVILNPKLKKKGNRTALFFEGCLSVDGFRAVVERSLEVEVS 204
Query: 547 GLDSNGAPIK 576
GLD +G PIK
Sbjct: 205 GLDRSGQPIK 214
[3][TOP]
>UniRef100_B9GKW9 Peptide deformylase n=1 Tax=Populus trichocarpa RepID=B9GKW9_POPTR
Length = 299
Score = 247 bits (630), Expect = 5e-64
Identities = 126/166 (75%), Positives = 140/166 (84%)
Frame = +1
Query: 79 SSSSSQTATVRTRAGWFSGLTDNKKKMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKI 258
S SSS TA +AGW G+ + KKK +LPD VKAGDPVLHEPA+E+DP EI SE++QKI
Sbjct: 87 SLSSSHTA----KAGWLLGMGE-KKKTSLPDIVKAGDPVLHEPAREVDPKEIGSERIQKI 141
Query: 259 IDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVN 438
IDDM++VMR APGVGLAAPQIGIP RIIVLEDT EYI YAPK E KAQDRRPFDLLVIVN
Sbjct: 142 IDDMVKVMRMAPGVGLAAPQIGIPLRIIVLEDTAEYIGYAPKNETKAQDRRPFDLLVIVN 201
Query: 439 PKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPIK 576
PKLK KSN+TA FFEGCLSVDGFRA+VER+LDVEV GL +G PIK
Sbjct: 202 PKLKKKSNRTAFFFEGCLSVDGFRAIVERHLDVEVIGLSRDGQPIK 247
[4][TOP]
>UniRef100_Q9FUZ0 Peptide deformylase 1A, chloroplastic n=1 Tax=Solanum lycopersicum
RepID=DEF1A_SOLLC
Length = 277
Score = 242 bits (618), Expect = 1e-62
Identities = 126/177 (71%), Positives = 144/177 (81%)
Frame = +1
Query: 46 KPPLNLTLSSPSSSSSQTATVRTRAGWFSGLTDNKKKMNLPDTVKAGDPVLHEPAQEIDP 225
+P + L S + SS TA RAGWF GL + KKK +PD VKAGDPVLHEP+Q+I
Sbjct: 54 RPSVCTDLISKKNYSSATA----RAGWFLGLGE-KKKQAMPDIVKAGDPVLHEPSQDIPL 108
Query: 226 SEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQD 405
EI SE++QKII++M++VMR APGVGLAAPQIGIP +IIVLEDT EYISYAPK+E KAQD
Sbjct: 109 EEIGSERIQKIIEEMVKVMRNAPGVGLAAPQIGIPLKIIVLEDTNEYISYAPKDETKAQD 168
Query: 406 RRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPIK 576
RRPF LLVI+NPKLK K NKTALFFEGCLSVDGFRAVVER+L+VEVTGLD NG IK
Sbjct: 169 RRPFGLLVIINPKLKKKGNKTALFFEGCLSVDGFRAVVERHLEVEVTGLDRNGKAIK 225
[5][TOP]
>UniRef100_Q9FV53 Peptide deformylase 1A, chloroplastic n=1 Tax=Arabidopsis thaliana
RepID=DEF1A_ARATH
Length = 259
Score = 238 bits (606), Expect = 3e-61
Identities = 123/185 (66%), Positives = 148/185 (80%), Gaps = 5/185 (2%)
Frame = +1
Query: 37 PISKPPLNLTLSS-----PSSSSSQTATVRTRAGWFSGLTDNKKKMNLPDTVKAGDPVLH 201
P+S+P + L+ P+SSSS ++ T+AGW GL + KKK++LP+ V +GDPVLH
Sbjct: 26 PVSRPGSSHLLNRKLYNLPTSSSS---SLSTKAGWLLGLGEKKKKVDLPEIVASGDPVLH 82
Query: 202 EPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAP 381
E A+E+DP EI SE++QKIIDDMI+VMR APGVGLAAPQIG+P RIIVLEDTKEYISYAP
Sbjct: 83 EKAREVDPGEIGSERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYAP 142
Query: 382 KEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSN 561
KEEI AQ+RR FDL+V+VNP LK +SNK ALFFEGCLSVDGFRA VERYL+V VTG D
Sbjct: 143 KEEILAQERRHFDLMVMVNPVLKERSNKKALFFEGCLSVDGFRAAVERYLEVVVTGYDRQ 202
Query: 562 GAPIK 576
G I+
Sbjct: 203 GKRIE 207
[6][TOP]
>UniRef100_UPI0001983FBB PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001983FBB
Length = 277
Score = 237 bits (605), Expect = 4e-61
Identities = 125/190 (65%), Positives = 142/190 (74%)
Frame = +1
Query: 7 HKTTTPLSALPISKPPLNLTLSSPSSSSSQTATVRTRAGWFSGLTDNKKKMNLPDTVKAG 186
H T P S S P + SS ++T+ AGW GL D KK LP+ VKAG
Sbjct: 38 HPTLIPTSKPGPSDPNRIFSTRKTYRPSSSSSTLIASAGWILGLGD--KKPALPEIVKAG 95
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEY 366
DPVLHE AQE++P EI S+++QKIIDDMI+ MR APGVGLAAPQIGIP RIIVLEDTKEY
Sbjct: 96 DPVLHESAQEVEPGEIGSDRIQKIIDDMIKAMRTAPGVGLAAPQIGIPLRIIVLEDTKEY 155
Query: 367 ISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVT 546
ISY K+ IKAQ+RRPFDLLVI+NPKL+ K N+TA FFEGCLSVDGFRAVVER+L VEVT
Sbjct: 156 ISYDRKDVIKAQERRPFDLLVILNPKLRKKGNRTAFFFEGCLSVDGFRAVVERHLQVEVT 215
Query: 547 GLDSNGAPIK 576
GL NG PIK
Sbjct: 216 GLSRNGKPIK 225
[7][TOP]
>UniRef100_B4FRX0 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FRX0_MAIZE
Length = 256
Score = 231 bits (588), Expect = 4e-59
Identities = 127/198 (64%), Positives = 151/198 (76%), Gaps = 13/198 (6%)
Frame = +1
Query: 22 PLSALP--ISKPPLNLTLSSPSSSS---SQTATVRTRAG--WFSGLTDNK------KKMN 162
PLSA + P LT SS S+SS + +VR AG W SGL K M
Sbjct: 7 PLSAAATLLLAPATPLTGSSVSASSVGGRRWRSVRADAGGGWLSGLLGGKGGGASTAMMV 66
Query: 163 LPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRII 342
P TVKAGDPVLHEPAQE+ P ++ SEKVQ +ID M+ VMR+APGVGLAAPQIG+P RII
Sbjct: 67 TPGTVKAGDPVLHEPAQEVAPGDVLSEKVQGVIDRMVDVMRRAPGVGLAAPQIGVPLRII 126
Query: 343 VLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVE 522
VLEDT+EYISYAPK++I+AQDRRPFDLLVI+NPK+K+ S +TALFFEGCLSVDG+RAVVE
Sbjct: 127 VLEDTQEYISYAPKKDIEAQDRRPFDLLVIINPKIKSTSKRTALFFEGCLSVDGYRAVVE 186
Query: 523 RYLDVEVTGLDSNGAPIK 576
R+LDVEV+GLD NG+ +K
Sbjct: 187 RHLDVEVSGLDRNGSTMK 204
[8][TOP]
>UniRef100_C5X3Z9 Putative uncharacterized protein Sb02g041130 n=1 Tax=Sorghum
bicolor RepID=C5X3Z9_SORBI
Length = 193
Score = 227 bits (578), Expect = 6e-58
Identities = 109/137 (79%), Positives = 126/137 (91%)
Frame = +1
Query: 166 PDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIV 345
P TVKAGDPVLHEPAQE+ P +++SEKVQ IID M+ VMRKAPGVGLAAPQIG+P RIIV
Sbjct: 5 PGTVKAGDPVLHEPAQEVAPGDVRSEKVQGIIDRMVDVMRKAPGVGLAAPQIGVPLRIIV 64
Query: 346 LEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVER 525
LEDT+EYISYAPK+EI+AQDRRPFDLL+I+NPK+KN S +TALFFEGCLSVDG+RAVVER
Sbjct: 65 LEDTQEYISYAPKKEIEAQDRRPFDLLIIINPKIKNTSKRTALFFEGCLSVDGYRAVVER 124
Query: 526 YLDVEVTGLDSNGAPIK 576
+LDVEV+GLD NG+ IK
Sbjct: 125 HLDVEVSGLDRNGSAIK 141
[9][TOP]
>UniRef100_B6RGY0 Peptide deformylase 1A, chloroplastic n=1 Tax=Oryza sativa Japonica
Group RepID=DEF1A_ORYSJ
Length = 260
Score = 226 bits (577), Expect = 7e-58
Identities = 117/176 (66%), Positives = 137/176 (77%), Gaps = 10/176 (5%)
Frame = +1
Query: 79 SSSSSQTATVRTRAG---WFSGLTDNK-------KKMNLPDTVKAGDPVLHEPAQEIDPS 228
S + ++VR AG W SGL K P TVKAGDPVLHEPAQ++ P
Sbjct: 33 SPGGRRWSSVRASAGGGGWLSGLLGGKGGGGAPTAMTVTPGTVKAGDPVLHEPAQDVAPG 92
Query: 229 EIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDR 408
+I SEKVQ +ID M+ VMRKAPGVGLAAPQIG+P +IIVLEDT+EYISYAPK++I+AQDR
Sbjct: 93 DIPSEKVQGVIDRMVAVMRKAPGVGLAAPQIGVPLKIIVLEDTQEYISYAPKKDIEAQDR 152
Query: 409 RPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPIK 576
RPFDLLVI+NPKLK S +TALFFEGCLSVDG+RA+VER+LDVEV+GLD NG PIK
Sbjct: 153 RPFDLLVIINPKLKTTSKRTALFFEGCLSVDGYRALVERHLDVEVSGLDRNGRPIK 208
[10][TOP]
>UniRef100_Q2HVV7 Formylmethionine deformylase n=1 Tax=Medicago truncatula
RepID=Q2HVV7_MEDTR
Length = 257
Score = 222 bits (566), Expect = 1e-56
Identities = 125/184 (67%), Positives = 141/184 (76%)
Frame = +1
Query: 25 LSALPISKPPLNLTLSSPSSSSSQTATVRTRAGWFSGLTDNKKKMNLPDTVKAGDPVLHE 204
LS+ SK TLSSPSS +TA +R T NK LP VKAGDPV+HE
Sbjct: 38 LSSTKFSK--FGSTLSSPSS---ETALLRK--------TVNK----LPYIVKAGDPVIHE 80
Query: 205 PAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPK 384
PA+E+D SEIKS+K+Q IIDDMI VMRKAPGVG+AAPQIGIP RIIVLED +E+I Y +
Sbjct: 81 PAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLRIIVLEDKEEFICYNTE 140
Query: 385 EEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
EE KAQDRRPFDLLVI+NPKLKNKSN+TA FFEGCLSVD F+A+VERYLDVEVTG D G
Sbjct: 141 EETKAQDRRPFDLLVILNPKLKNKSNRTAFFFEGCLSVDRFQALVERYLDVEVTGFDRYG 200
Query: 565 APIK 576
PIK
Sbjct: 201 EPIK 204
[11][TOP]
>UniRef100_C6T0J2 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T0J2_SOYBN
Length = 223
Score = 200 bits (508), Expect = 7e-50
Identities = 102/153 (66%), Positives = 119/153 (77%)
Frame = +1
Query: 118 AGWFSGLTDNKKKMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPG 297
+GW +G L VKAG+ VLH A+E++ EIKSE+VQKIIDDM+RVMRKAPG
Sbjct: 27 SGWLAG--------KLAKIVKAGEAVLHSRAEEVEAIEIKSERVQKIIDDMVRVMRKAPG 78
Query: 298 VGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALF 477
VGLAAPQIGIP RIIVLED +Y++Y +E+KAQDR PFDLLVI+NPKLKN + +TALF
Sbjct: 79 VGLAAPQIGIPLRIIVLEDKIQYMAYYSNQELKAQDRTPFDLLVILNPKLKNTTTRTALF 138
Query: 478 FEGCLSVDGFRAVVERYLDVEVTGLDSNGAPIK 576
FEGCLSV G+ AVVERYLDVEV G D G PIK
Sbjct: 139 FEGCLSVPGYSAVVERYLDVEVAGFDRYGEPIK 171
[12][TOP]
>UniRef100_Q2HVV8 Formylmethionine deformylase n=1 Tax=Medicago truncatula
RepID=Q2HVV8_MEDTR
Length = 266
Score = 198 bits (503), Expect = 3e-49
Identities = 110/176 (62%), Positives = 126/176 (71%)
Frame = +1
Query: 49 PPLNLTLSSPSSSSSQTATVRTRAGWFSGLTDNKKKMNLPDTVKAGDPVLHEPAQEIDPS 228
PP N LSS SS+SS+TA + K LP V+AGDPVLHEPA+E+D S
Sbjct: 37 PPSNTKLSSFSSASSETAFL-----------SKTLKSELPHIVQAGDPVLHEPAREVDHS 85
Query: 229 EIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDR 408
EI S+K+QKIID MI VMR APG+ L+A +IGIP RIIVLE+ KE + +E K DR
Sbjct: 86 EINSDKIQKIIDGMILVMRNAPGISLSAQKIGIPLRIIVLEEPKENLYNYTEEVNKIIDR 145
Query: 409 RPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPIK 576
RPFDLLVI+NPKLK KSNKT LFFEGCLSV GF+AVVERYLDVEV G D G PIK
Sbjct: 146 RPFDLLVILNPKLKIKSNKTFLFFEGCLSVHGFQAVVERYLDVEVEGFDRYGEPIK 201
[13][TOP]
>UniRef100_A9NQN9 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NQN9_PICSI
Length = 305
Score = 192 bits (489), Expect = 1e-47
Identities = 101/174 (58%), Positives = 123/174 (70%), Gaps = 5/174 (2%)
Frame = +1
Query: 70 SSPSSSSSQTATVRTRAGWFSGLTDNK-----KKMNLPDTVKAGDPVLHEPAQEIDPSEI 234
+ P Q + AG F G K KK LP+ V+AGDPVLHE A E+ EI
Sbjct: 80 TKPMQRGHQRTSTVALAGGFFGFGKKKTGFGKKKTVLPEIVQAGDPVLHECAAEVAVDEI 139
Query: 235 KSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRP 414
SE++QKIIDDMI VM APG GLAAPQ+G+P +IIVLED +EYI + KEE +AQ+R P
Sbjct: 140 GSERIQKIIDDMIAVMWNAPGCGLAAPQLGVPLQIIVLEDKEEYIRFTLKEETEAQERHP 199
Query: 415 FDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPIK 576
FDLL+I+NPKLK+K KTA FFEGCLSV+GFR +VER+L+VEVTG +G PIK
Sbjct: 200 FDLLIIINPKLKSKGIKTAKFFEGCLSVNGFRGLVERHLEVEVTGFGRDGLPIK 253
[14][TOP]
>UniRef100_A7P7U0 Chromosome chr9 scaffold_7, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P7U0_VITVI
Length = 253
Score = 177 bits (450), Expect = 4e-43
Identities = 100/190 (52%), Positives = 117/190 (61%)
Frame = +1
Query: 7 HKTTTPLSALPISKPPLNLTLSSPSSSSSQTATVRTRAGWFSGLTDNKKKMNLPDTVKAG 186
H T P S S P + SS ++T+ AGW GL D KK LP+ VKAG
Sbjct: 38 HPTLIPTSKPGPSDPNRIFSTRKTYRPSSSSSTLIASAGWILGLGD--KKPALPEIVKAG 95
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEY 366
DPVLHE AQE++P EI S+++QKIIDDMI+ MR APGVGLAAPQIGIP R + +
Sbjct: 96 DPVLHESAQEVEPGEIGSDRIQKIIDDMIKAMRTAPGVGLAAPQIGIPLRCFIAKQ---- 151
Query: 367 ISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVT 546
VI+NPKL+ K N+TA FFEGCLSVDGFRAVVER+L VEVT
Sbjct: 152 --------------------VILNPKLRKKGNRTAFFFEGCLSVDGFRAVVERHLQVEVT 191
Query: 547 GLDSNGAPIK 576
GL NG PIK
Sbjct: 192 GLSRNGKPIK 201
[15][TOP]
>UniRef100_B9EXI6 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=B9EXI6_ORYSJ
Length = 155
Score = 174 bits (440), Expect = 6e-42
Identities = 83/103 (80%), Positives = 96/103 (93%)
Frame = +1
Query: 268 MIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKL 447
M+ VMRKAPGVGLAAPQIG+P +IIVLEDT+EYISYAPK++I+AQDRRPFDLLVI+NPKL
Sbjct: 1 MVAVMRKAPGVGLAAPQIGVPLKIIVLEDTQEYISYAPKKDIEAQDRRPFDLLVIINPKL 60
Query: 448 KNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPIK 576
K S +TALFFEGCLSVDG+RA+VER+LDVEV+GLD NG PIK
Sbjct: 61 KTTSKRTALFFEGCLSVDGYRALVERHLDVEVSGLDRNGRPIK 103
[16][TOP]
>UniRef100_A9RZP3 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9RZP3_PHYPA
Length = 194
Score = 171 bits (433), Expect = 4e-41
Identities = 87/133 (65%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
+AGDPVLHEPA+E+ +I S +++K I+DM+ VMR PGVGLAAPQIGIP +IIVLEDT
Sbjct: 3 QAGDPVLHEPAEEVMREDIGSARIEKAINDMVDVMRAGPGVGLAAPQIGIPLQIIVLEDT 62
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNK-SNKTALFFEGCLSVDGFRAVVERYLD 534
KE +SY EE +AQ R PFDLLVI+NPKL+ K S TA FFEGCLSV G RA+VER+L+
Sbjct: 63 KELMSYTSPEECEAQQRTPFDLLVIINPKLEMKASGGTAFFFEGCLSVAGHRALVERHLE 122
Query: 535 VEVTGLDSNGAPI 573
VEVTGL +G P+
Sbjct: 123 VEVTGLGRDGQPL 135
[17][TOP]
>UniRef100_A9RQP2 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9RQP2_PHYPA
Length = 191
Score = 170 bits (430), Expect = 8e-41
Identities = 83/134 (61%), Positives = 106/134 (79%), Gaps = 1/134 (0%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+AGDPVLH+PA+E+ I S ++K I+DM+ VMR PGVGLAAPQIG+P +IIVLED
Sbjct: 1 VQAGDPVLHKPAEEVKRENIGSSLIEKTINDMVDVMRAGPGVGLAAPQIGVPLQIIVLED 60
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNK-TALFFEGCLSVDGFRAVVERYL 531
TKE +SY EE +AQ R PFDLLVI+NPK++ K + TA FFEGCLSV+G+RA+VER+
Sbjct: 61 TKELMSYTSPEECEAQQRSPFDLLVIINPKIEKKEGRGTAYFFEGCLSVEGYRALVERHS 120
Query: 532 DVEVTGLDSNGAPI 573
+VEVTGL +G P+
Sbjct: 121 EVEVTGLGRDGRPL 134
[18][TOP]
>UniRef100_C1MWF4 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MWF4_9CHLO
Length = 185
Score = 134 bits (338), Expect = 4e-30
Identities = 67/135 (49%), Positives = 95/135 (70%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ V+AG P L E A+E+ S I + K Q++I +M+ + R GVGLAAPQIG+P RI VL
Sbjct: 1 EIVQAGTPCLREIAEEVPLSSIDTAKTQELIQEMLSICR-GRGVGLAAPQIGVPYRIFVL 59
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
EDT+E +S K++++A DR+PF V++NP + SN +A FFEGCLSV G+R +V RY
Sbjct: 60 EDTEEGMSDVSKKDLEAMDRKPFAAKVVINPVVTPVSNLSAAFFEGCLSVQGYRGLVRRY 119
Query: 529 LDVEVTGLDSNGAPI 573
L+V VTG +G+P+
Sbjct: 120 LEVRVTGYGGDGSPV 134
[19][TOP]
>UniRef100_Q01DJ0 Peptide deformylase (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q01DJ0_OSTTA
Length = 243
Score = 125 bits (313), Expect = 3e-27
Identities = 64/115 (55%), Positives = 86/115 (74%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
D V+AG P L + A+EIDP EI S ++Q++I +M+RVMR A GVGLAAPQ+GI R+IVL
Sbjct: 35 DVVQAGAPALRDRAKEIDPREIDSAEIQELIGEMVRVMR-ARGVGLAAPQLGIRKRVIVL 93
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRA 513
EDT+E +S + EE+ +Q R PF VI+NP L+ + +A+FFEGCLSV G+RA
Sbjct: 94 EDTEEGMSDSSAEELASQKRAPFACTVIINPTLERVGDASAIFFEGCLSVAGYRA 148
[20][TOP]
>UniRef100_A9EYX4 Peptide deformylase n=1 Tax=Sorangium cellulosum 'So ce 56'
RepID=A9EYX4_SORC5
Length = 203
Score = 124 bits (312), Expect = 4e-27
Identities = 67/148 (45%), Positives = 95/148 (64%), Gaps = 8/148 (5%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M LP V AG VL +PA + P EI +++++ ++ M+ VMRKAPGVGLAAPQIG+ +
Sbjct: 1 MELPPIVLAGRAVLRKPAAPVPPEEIGTKRLKHLVSTMVSVMRKAPGVGLAAPQIGVDQQ 60
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNK--------TALFFEGCL 492
+IVLED++E +S + + R PF L VI+NP L+ + A FFEGCL
Sbjct: 61 VIVLEDSEELMSRLTPGQRAERGRVPFRLRVIINPTLRVLAPSLPDAAGAGRATFFEGCL 120
Query: 493 SVDGFRAVVERYLDVEVTGLDSNGAPIK 576
SV G+ A+VER L VEV+G+D +G ++
Sbjct: 121 SVPGYMALVERDLSVEVSGVDEDGKEVR 148
[21][TOP]
>UniRef100_Q1IJN4 Peptide deformylase n=1 Tax=Candidatus Koribacter versatilis
Ellin345 RepID=Q1IJN4_ACIBL
Length = 208
Score = 123 bits (308), Expect = 1e-26
Identities = 63/131 (48%), Positives = 83/131 (63%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+AG+PVL PA+ + EI S ++ ++I+DM + APGVGLAAPQ+G+P ++ ++ED
Sbjct: 18 VQAGEPVLRTPAEPLAIKEIASREIARLIEDMRDTLEDAPGVGLAAPQVGVPIQLAIIED 77
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
EY P E++ + R P VI+NP LK FFEGCLSV GF AVV RY
Sbjct: 78 RAEYSKDIPTEQLAERGRVPVPFHVIINPVLKPLGKSQVDFFEGCLSVAGFIAVVPRYRK 137
Query: 535 VEVTGLDSNGA 567
V VT LD NGA
Sbjct: 138 VRVTCLDENGA 148
[22][TOP]
>UniRef100_Q08T67 Peptide deformylase (Fragment) n=1 Tax=Stigmatella aurantiaca
DW4/3-1 RepID=Q08T67_STIAU
Length = 188
Score = 120 bits (301), Expect = 8e-26
Identities = 62/133 (46%), Positives = 87/133 (65%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+AG+PVL + A+E+ P EI S +V+++I M MR APGVGLAAPQ+G+ R++V+ED
Sbjct: 6 VQAGEPVLRQRARELTPEEISSPEVKQLIQLMRDTMRDAPGVGLAAPQVGVGLRLVVVED 65
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
EY E++ A++R+P D V++NP L + F EGCLSV GF A+V R
Sbjct: 66 RAEYHVGIKPEDLSARERQPVDFHVLINPTLVVEDPALVEFHEGCLSVAGFSALVPRARG 125
Query: 535 VEVTGLDSNGAPI 573
V V LD +GAP+
Sbjct: 126 VRVEALDEHGAPV 138
[23][TOP]
>UniRef100_Q7NJV3 Peptide deformylase 1 n=1 Tax=Gloeobacter violaceus
RepID=DEF1_GLOVI
Length = 227
Score = 119 bits (297), Expect = 2e-25
Identities = 58/135 (42%), Positives = 87/135 (64%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ VK GDPVL A+ ++ EI+SE +Q++I M MR+APGVGLAAPQ+G+ +++V+
Sbjct: 47 EIVKTGDPVLRLTAKPLNSDEIQSEAIQQLIAAMAERMREAPGVGLAAPQVGVSVQLVVI 106
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
ED EYI E + ++R P V++NP L + ++A+FFEGCLS+ G++ +V R
Sbjct: 107 EDRPEYIERLSGAERREREREPVPFHVLINPVLSVEGEESAVFFEGCLSIPGYQGLVARA 166
Query: 529 LDVEVTGLDSNGAPI 573
V V LD AP+
Sbjct: 167 RVVRVEALDERAAPV 181
[24][TOP]
>UniRef100_Q1D6Y1 Peptide deformylase n=1 Tax=Myxococcus xanthus DK 1622
RepID=Q1D6Y1_MYXXD
Length = 201
Score = 118 bits (295), Expect = 4e-25
Identities = 60/133 (45%), Positives = 84/133 (63%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+AGDPVL A+++ P EI S + ++I+ M MR APGVGLAAPQ+G+ R++V+ED
Sbjct: 6 VQAGDPVLRRKARDLTPEEIASPETARLIEQMRDTMRDAPGVGLAAPQVGVGLRVVVIED 65
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
EY + + E A+ R+P V++NP+L + A F EGCLSV GF A+V R
Sbjct: 66 RPEYQAGLSESERAARGRKPVPFHVLINPRLVVEDAAPAEFHEGCLSVSGFAALVPRACA 125
Query: 535 VEVTGLDSNGAPI 573
V V LD +G P+
Sbjct: 126 VRVDALDEHGQPV 138
[25][TOP]
>UniRef100_UPI0000DD8B92 Os01g0555800 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD8B92
Length = 121
Score = 117 bits (294), Expect = 5e-25
Identities = 55/69 (79%), Positives = 64/69 (92%)
Frame = +1
Query: 370 SYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTG 549
SYAPK++I+AQDRRPFDLLVI+NPKLK S +TALFFEGCLSVDG+RA+VER+LDVEV+G
Sbjct: 1 SYAPKKDIEAQDRRPFDLLVIINPKLKTTSKRTALFFEGCLSVDGYRALVERHLDVEVSG 60
Query: 550 LDSNGAPIK 576
LD NG PIK
Sbjct: 61 LDRNGRPIK 69
[26][TOP]
>UniRef100_A4RSE7 Peptide deformylase, mitochondrial n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RSE7_OSTLU
Length = 274
Score = 116 bits (291), Expect = 1e-24
Identities = 64/135 (47%), Positives = 86/135 (63%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
D V+AG P L + A+ +D EI S ++Q++I +M+RV R A GVGLAAPQ+G R++VL
Sbjct: 54 DVVQAGAPALRDVARAVDVDEIDSTEIQELIAEMLRVCR-ARGVGLAAPQLGARRRVVVL 112
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
EDT E +S E + + R F VIVNP L + +A FFEGCLSV G+RAVV R+
Sbjct: 113 EDTTEGMSDETSEALAMKRREAFRAKVIVNPTLTPIGDASAAFFEGCLSVAGYRAVVRRH 172
Query: 529 LDVEVTGLDSNGAPI 573
L V G +G P+
Sbjct: 173 LRVRCRGYGGDGKPV 187
[27][TOP]
>UniRef100_Q608W7 Peptide deformylase n=1 Tax=Methylococcus capsulatus
RepID=Q608W7_METCA
Length = 191
Score = 114 bits (285), Expect = 5e-24
Identities = 63/132 (47%), Positives = 83/132 (62%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+AG+PVL + A+ + P EI+S VQ +I M MR APGVGLAAPQIG ++ V+ED
Sbjct: 11 VQAGEPVLRQRARPLSPEEIRSAAVQALIGHMRETMRDAPGVGLAAPQIGQGLQLAVIED 70
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
+Y EE+ A+ R P VIVNP++ +S +T +F EGCLS+ GF A VER
Sbjct: 71 RADYHRGLSAEELAARGREPVPFHVIVNPEIVARSEETDVFHEGCLSLAGFSARVERARW 130
Query: 535 VEVTGLDSNGAP 570
V V+ LD G P
Sbjct: 131 VRVSCLDHRGEP 142
[28][TOP]
>UniRef100_UPI0001863374 hypothetical protein BRAFLDRAFT_218856 n=1 Tax=Branchiostoma
floridae RepID=UPI0001863374
Length = 188
Score = 113 bits (283), Expect = 9e-24
Identities = 54/133 (40%), Positives = 85/133 (63%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V G+P+L A +D IKS++ Q+++D +++VMRK VGL+APQ+G+ +II +E
Sbjct: 13 VPVGNPILRGQALAVDNRNIKSKETQEVLDQLVKVMRKKGAVGLSAPQVGVGLQIIAVEC 72
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
T++ + P+E K ++ + F L + +NPKLK T +F EGC S+ G++A V RY
Sbjct: 73 TRKQLDLVPQEIRKIREMQEFPLKIFINPKLKVTDYSTVVFPEGCESLPGYQANVPRYYG 132
Query: 535 VEVTGLDSNGAPI 573
V +TGLD G P+
Sbjct: 133 VTITGLDREGKPV 145
[29][TOP]
>UniRef100_C3XUB2 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3XUB2_BRAFL
Length = 188
Score = 113 bits (283), Expect = 9e-24
Identities = 54/133 (40%), Positives = 85/133 (63%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V G+P+L A +D IKS++ Q++++ +++VMRK VGL+APQ+G+ +II +E
Sbjct: 13 VPVGNPILRGQALAVDHRNIKSKETQEVLEQLVKVMRKKGAVGLSAPQVGVGLQIIAVEC 72
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
T++ + P+E K ++ + F L + +NPKLK T +F EGC S+ GF+A V RY
Sbjct: 73 TRKQLDLVPQEIRKIREMQEFPLKIFINPKLKVTDYSTVVFPEGCESLPGFQANVPRYYG 132
Query: 535 VEVTGLDSNGAPI 573
V +TGLD G P+
Sbjct: 133 VNITGLDREGMPV 145
[30][TOP]
>UniRef100_C1BJH4 Peptide deformylase, mitochondrial n=1 Tax=Osmerus mordax
RepID=C1BJH4_OSMMO
Length = 248
Score = 111 bits (277), Expect = 5e-23
Identities = 69/199 (34%), Positives = 100/199 (50%), Gaps = 17/199 (8%)
Frame = +1
Query: 28 SALPISK--------PPLN---------LTLSSPSSSSSQTATVRTRAGWFSGLTDNKKK 156
SALP+S+ PPL+ + PS S S VR+ +
Sbjct: 7 SALPLSRVGRLCTTSPPLSGGFFHWTWGTVPTPPSRSYSSNIKVRSYLQYIKHKIKPPPS 66
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
P + GDPVL A +DPS + +VQ++I M++VMRK VGL+APQ+G+P R
Sbjct: 67 PPYPHVCQVGDPVLRSHAAPVDPSAVLGSEVQEVIGAMVKVMRKLQCVGLSAPQVGVPLR 126
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
I+ LE + + +A+ L V +NP+L+ +T LF E C S+ GF A
Sbjct: 127 ILALEFPESMLKDVSPAAREARGVAVVPLRVFINPQLRVLDRRTVLFQEACESISGFSAR 186
Query: 517 VERYLDVEVTGLDSNGAPI 573
V RYL+VEV+GL+ P+
Sbjct: 187 VPRYLEVEVSGLNEKAEPV 205
[31][TOP]
>UniRef100_Q4SKB3 Chromosome 13 SCAF14566, whole genome shotgun sequence. (Fragment)
n=2 Tax=Tetraodon nigroviridis RepID=Q4SKB3_TETNG
Length = 198
Score = 108 bits (271), Expect = 2e-22
Identities = 54/133 (40%), Positives = 82/133 (61%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
+ GDPVL A +DP + +VQK++ +++VMR+ VGL+APQIG+P RI+ LE
Sbjct: 24 QVGDPVLRSRAAPVDPGAVGGAEVQKVVHTLVKVMRELDCVGLSAPQIGVPLRILALEYP 83
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
++ + + +A+ L + VNP+L+ +TALF E C S+ GF A V RYL V
Sbjct: 84 EKMLEESSPASREARGLSAQPLRIFVNPQLRVLDGRTALFQEACESISGFSATVPRYLSV 143
Query: 538 EVTGLDSNGAPIK 576
EV+GL+ NG ++
Sbjct: 144 EVSGLNENGEEVR 156
[32][TOP]
>UniRef100_C1EDB7 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EDB7_9CHLO
Length = 285
Score = 108 bits (271), Expect = 2e-22
Identities = 56/110 (50%), Positives = 77/110 (70%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ V+AG PVL + A+EI I S +Q++I +MI +MR GVGLAAPQIG+P RI V+
Sbjct: 66 EIVQAGTPVLRQMAEEIPLDRIDSATIQELIQEMISIMRNR-GVGLAAPQIGVPYRIFVM 124
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSV 498
EDT+E +S K+++ AQ+R PF VI+NP + SN++ FFEGCLSV
Sbjct: 125 EDTEEGMSDVSKDDLVAQERAPFPAKVIINPTVTPVSNQSCAFFEGCLSV 174
[33][TOP]
>UniRef100_UPI0000E48B64 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E48B64
Length = 186
Score = 107 bits (268), Expect = 5e-22
Identities = 54/132 (40%), Positives = 82/132 (62%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
+ GDPVL + + P +I++++ Q +I M+ VMRK GVGLAAPQIG+ ++ V+E T
Sbjct: 11 QVGDPVLRGKSDPVHPQDIRTKEFQDLIQKMVGVMRKTGGVGLAAPQIGVAQQVFVMEFT 70
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
++++ +E KA++ L V VNP LK S+ + EGCLS+ GF A R +V
Sbjct: 71 EKHMKGFSEEIQKAREMEVVPLKVFVNPSLKILSDNQVVLTEGCLSLTGFTAATPRAHEV 130
Query: 538 EVTGLDSNGAPI 573
E+TGL+ G P+
Sbjct: 131 EITGLNEKGEPV 142
[34][TOP]
>UniRef100_Q4V8U4 Novel protein (Zgc:114141) n=1 Tax=Danio rerio RepID=Q4V8U4_DANRE
Length = 247
Score = 107 bits (267), Expect = 7e-22
Identities = 51/132 (38%), Positives = 82/132 (62%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
+ GDPVL A E++P I+ +VQK+I +++VMRK VGL+APQIG+P RI+ LE
Sbjct: 73 QVGDPVLRSHAAEVEPGAIQGPEVQKVIKTLVKVMRKLECVGLSAPQIGVPLRILALEYP 132
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
K+ + + ++A+ L++ +NP+L+ +T +F E C S+ G+ A V RY+ V
Sbjct: 133 KKMLEESSTASVEARGLVAVPLMIFINPQLRVLDGRTVIFQEACESISGYSASVPRYVSV 192
Query: 538 EVTGLDSNGAPI 573
EV+GL+ +
Sbjct: 193 EVSGLNEKAEEV 204
[35][TOP]
>UniRef100_UPI0000DA4297 PREDICTED: similar to peptide deformylase-like protein n=2
Tax=Rattus norvegicus RepID=UPI0000DA4297
Length = 254
Score = 106 bits (264), Expect = 1e-21
Identities = 62/180 (34%), Positives = 104/180 (57%), Gaps = 6/180 (3%)
Frame = +1
Query: 52 PLNLTLS---SPSSSSSQTATVRTRAGW--FSGLTDNKKKMNLPDTVKAGDPVLHEPAQE 216
P +TLS S SSS+S RTR+ W L + + GDPVL A
Sbjct: 33 PAWVTLSRGQSCSSSASLEGAARTRSYWRYLRRLVRGAPQPPYTRVCQVGDPVLRTVAAP 92
Query: 217 IDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLE-DTKEYISYAPKEEI 393
++P ++ ++Q++++ +++VMR+ VGL+APQ+G+P +++VLE + + +++P+
Sbjct: 93 VEPKQLAGPELQRLVEQLVQVMRRRGCVGLSAPQLGVPLQVLVLEFPDRLFRAFSPRLR- 151
Query: 394 KAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPI 573
+ + PF L V+VNP L+ ++ F EGC SV GF A V R+ V+++GLD G P+
Sbjct: 152 ELRQMEPFPLRVLVNPSLRVLDSRLVTFPEGCESVAGFLACVPRFQAVQISGLDPKGEPV 211
[36][TOP]
>UniRef100_UPI00016E22A6 UPI00016E22A6 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E22A6
Length = 245
Score = 105 bits (263), Expect = 2e-21
Identities = 62/169 (36%), Positives = 96/169 (56%), Gaps = 6/169 (3%)
Frame = +1
Query: 85 SSSQTATVRTRAGWFSGLTDNKKKMNLPDT------VKAGDPVLHEPAQEIDPSEIKSEK 246
SSS +++++ R S L K K+ P + + GDPVL A +DP+ I+ +
Sbjct: 38 SSSYSSSIKVR----SYLQYMKHKIIPPPSPPYKHVCQVGDPVLRSRAAAVDPAAIRGAE 93
Query: 247 VQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLL 426
+QK I+ +++VMRK VGL+APQIG+P RI+ LE ++ + + +A+ L
Sbjct: 94 IQKTINTLVKVMRKLDCVGLSAPQIGVPLRILALEYPEKMLEESSPASREARGLSAQPLR 153
Query: 427 VIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPI 573
+ VNP L+ +T LF E C S+ G+ A V RYL VEV+GL+ G +
Sbjct: 154 IFVNPHLRVLDGRTVLFQEACESISGYSATVPRYLSVEVSGLNEKGEDV 202
[37][TOP]
>UniRef100_B5XDL3 Peptide deformylase, mitochondrial n=1 Tax=Salmo salar
RepID=B5XDL3_SALSA
Length = 249
Score = 105 bits (261), Expect = 3e-21
Identities = 52/136 (38%), Positives = 79/136 (58%)
Frame = +1
Query: 166 PDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIV 345
P + G+PVL A +DP ++ VQ++I M++VMRK VGL+APQ+G+P RI+
Sbjct: 71 PHVCQVGEPVLRAQAAAVDPGAVQGPAVQEVIHTMVKVMRKFECVGLSAPQVGVPLRILA 130
Query: 346 LEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVER 525
LE + + + +A+ L + +NP+L+ +T LF E C S+ GF A V R
Sbjct: 131 LEFPERMLEDSLPAAREARGLTAVPLRIFINPQLRVLDGRTVLFQEACESISGFSATVPR 190
Query: 526 YLDVEVTGLDSNGAPI 573
YL VEV+GL+ P+
Sbjct: 191 YLSVEVSGLNEKAEPV 206
[38][TOP]
>UniRef100_A1R6S4 Peptide deformylase n=1 Tax=Arthrobacter aurescens TC1
RepID=A1R6S4_ARTAT
Length = 224
Score = 102 bits (254), Expect = 2e-20
Identities = 57/138 (41%), Positives = 81/138 (58%)
Frame = +1
Query: 163 LPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRII 342
LP V+AG PVL + A D +I ++ ++ M VM APGVGLAAPQ+GIP ++
Sbjct: 34 LPSIVQAGHPVLRQLAAPYD-GQIDDAELAAFLERMKEVMHDAPGVGLAAPQLGIPLQLA 92
Query: 343 VLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVE 522
VLED E E + R P + IVNP+ + +TA F+EGCLSV G++AVV
Sbjct: 93 VLEDKYE----VDPESAAVRHREPLEFFAIVNPQYRPLGTETASFYEGCLSVSGYQAVVT 148
Query: 523 RYLDVEVTGLDSNGAPIK 576
R+ +VE+ + G P++
Sbjct: 149 RHRNVELRYTNPAGEPVE 166
[39][TOP]
>UniRef100_B7PRY0 Polypeptide deformylase, putative n=1 Tax=Ixodes scapularis
RepID=B7PRY0_IXOSC
Length = 217
Score = 102 bits (254), Expect = 2e-20
Identities = 51/129 (39%), Positives = 84/129 (65%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
+ GDPVL A+ +DP +I S +++K+I M +VMR VG++APQIG P +I ++E +
Sbjct: 35 QVGDPVLRVRAEPVDPQKITSPEIRKVIHTMRQVMRGTYSVGISAPQIGCPLQITMMEFS 94
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
I A KE++ A+ + F L V +NP ++ +N+ +F EGC S+ G+ A V RY +V
Sbjct: 95 NSNIRMAKKEDMTARLYQAFPLKVFINPTMEVVNNQQLVFPEGCESIRGYSAEVPRYYEV 154
Query: 538 EVTGLDSNG 564
+++GL+ +G
Sbjct: 155 KISGLNEHG 163
[40][TOP]
>UniRef100_B3RV29 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3RV29_TRIAD
Length = 201
Score = 101 bits (251), Expect = 5e-20
Identities = 57/139 (41%), Positives = 79/139 (56%)
Frame = +1
Query: 148 KKKMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGI 327
+K + L +AG+ VL E A +DP+ I S V+K+ID MI+ MR +G+AAPQ+G
Sbjct: 24 RKLLRLNYIRQAGESVLREKAAAVDPTAIVSTDVKKLIDRMIKTMRSHGDLGIAAPQLGR 83
Query: 328 PSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGF 507
P RII LE TK ++SY + R L V++NP+LK N +E C S+
Sbjct: 84 PLRIITLEITKRHLSYLQAQYRNVVQRDTVPLQVLINPQLKVLDNHKVAEYESCSSIHNC 143
Query: 508 RAVVERYLDVEVTGLDSNG 564
A V RY VEV+ LD +G
Sbjct: 144 MAKVPRYTTVEVSALDRHG 162
[41][TOP]
>UniRef100_B0WV60 Peptide deformylase, mitochondrial n=1 Tax=Culex quinquefasciatus
RepID=B0WV60_CULQU
Length = 236
Score = 101 bits (251), Expect = 5e-20
Identities = 68/169 (40%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Frame = +1
Query: 91 SQTATVRTRAGWFSGLTDNKKKMNLPD---TVKAGDPVLHEPAQEIDPSEIKSEKVQKII 261
S T + + A W+ L +K N P + GDPVL + AQ + P + S +V+ ++
Sbjct: 10 STTTQLGSLARWYQKLWRSKGPTNGPPYAHVTQVGDPVLRQKAQLVPPEAVTSPEVRFLV 69
Query: 262 DDMIRVMRKAPGVGLAAPQIGIPSRIIVLE-DTKEYISYAPKE-EIKAQDR------RPF 417
MI VMRK VGLAAPQIGI RI+V+E K Y E +IK D RP
Sbjct: 70 QAMIDVMRKYSCVGLAAPQIGISLRILVMEFKDKLRDEYTSAEYKIKEMDTLPLTVGRPT 129
Query: 418 DLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
++V++NP+LK + + F E C SV GF A V RY +V ++GLD NG
Sbjct: 130 FMVVLINPELKVTNYEKKSFTEACASVKGFSAEVPRYSEVLLSGLDENG 178
[42][TOP]
>UniRef100_UPI0001B559FC peptide deformylase n=1 Tax=Streptomyces sp. SPB78
RepID=UPI0001B559FC
Length = 214
Score = 100 bits (249), Expect = 8e-20
Identities = 55/133 (41%), Positives = 80/133 (60%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V AGDPVL PA + ++ + +++ M R MR+APGVGLAAPQIG+P R+ VLED
Sbjct: 27 VAAGDPVLRTPAAPYE-GQLPEALLARLLAAMRRTMREAPGVGLAAPQIGVPLRLAVLED 85
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
+ P+E + ++R P V+VNP + + A F+EGCLSV G++AVV R+
Sbjct: 86 P----ATVPEEVRRVREREPLPYRVLVNPVYEGVGERRAAFYEGCLSVPGWQAVVARHAV 141
Query: 535 VEVTGLDSNGAPI 573
V + D +G +
Sbjct: 142 VRLRAEDEHGTAL 154
[43][TOP]
>UniRef100_A7SK78 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis
RepID=A7SK78_NEMVE
Length = 192
Score = 99.4 bits (246), Expect = 2e-19
Identities = 52/141 (36%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Frame = +1
Query: 166 PDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIV 345
P + GDPVL EPA+ +D + + S + ++D +++VMR G G+AAPQIG+ ++I
Sbjct: 9 PKIRQVGDPVLREPAEAVDVTFVHSPDFKAMVDRLVKVMRSHDGAGIAAPQIGVGLQVIA 68
Query: 346 LEDTKEYISYAPKEEIKAQDRRPFDLLVI-----VNPKLKNKSNKTALFFEGCLSVDGFR 510
+E T +++ +D + + ++ +NPKL+ + K F E CLSV+G
Sbjct: 69 MEYTGKHMKKLKDNGFSDKDLKRMGIAIVPLKVFINPKLRVINPKMLAFRESCLSVEGHS 128
Query: 511 AVVERYLDVEVTGLDSNGAPI 573
AVV R +VEVT LD N PI
Sbjct: 129 AVVPRMSEVEVTALDQNATPI 149
[44][TOP]
>UniRef100_UPI00001F69C6 peptide deformylase-like protein n=1 Tax=Mus musculus
RepID=UPI00001F69C6
Length = 231
Score = 98.6 bits (244), Expect = 3e-19
Identities = 54/167 (32%), Positives = 90/167 (53%), Gaps = 2/167 (1%)
Frame = +1
Query: 79 SSSSSQTATVRTRAGW--FSGLTDNKKKMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQ 252
SS ++ RTR+ W L + + GDPVL A ++P ++ ++Q
Sbjct: 22 SSLAALEGPARTRSYWRYLRRLVCGAPQPPYAHVCQVGDPVLRVVAAPVEPEQLAGPELQ 81
Query: 253 KIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVI 432
+++ M++VMR+ VGL+APQ+G+P +++ LE + + + + PF L V+
Sbjct: 82 RLVGRMVQVMRRRGCVGLSAPQLGVPLQVLALEFPDKLLRAFSPRLRELRQMEPFPLRVL 141
Query: 433 VNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPI 573
VNP L+ ++ F EGC SV GF A V R+ V+++GLD G P+
Sbjct: 142 VNPSLRVLDSRLVTFPEGCESVAGFLACVPRFQAVQISGLDPKGEPV 188
[45][TOP]
>UniRef100_Q6DIL5 Peptide deformylase like protein n=1 Tax=Xenopus (Silurana)
tropicalis RepID=Q6DIL5_XENTR
Length = 239
Score = 98.6 bits (244), Expect = 3e-19
Identities = 56/163 (34%), Positives = 88/163 (53%), Gaps = 11/163 (6%)
Frame = +1
Query: 109 RTRAGWFSGLTDN-----KKKMNLPDT------VKAGDPVLHEPAQEIDPSEIKSEKVQK 255
R + W SG + K+++ P T + GDPVL A + ++I Q
Sbjct: 31 RMSSSWISGKKRSYWRYLKRRVMGPVTPPYSRVTQTGDPVLRCTAARVPCAQISHPDTQA 90
Query: 256 IIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIV 435
+++ M+RV+R VGL+APQIG+P RI+ + ++ P E A++ PF L + +
Sbjct: 91 VVNQMVRVLRAGCCVGLSAPQIGVPLRILAVAFPQQMYQAVPPEVRNAREMSPFPLQIFI 150
Query: 436 NPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
NP+++ ++T F EGC SV GF AVV RY VE+ G++ G
Sbjct: 151 NPEMRIVDSRTLSFPEGCSSVQGFSAVVPRYYAVELQGMNPKG 193
[46][TOP]
>UniRef100_UPI00006A2575 MGC89413 protein. n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A2575
Length = 239
Score = 98.2 bits (243), Expect = 4e-19
Identities = 49/129 (37%), Positives = 76/129 (58%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
+ GDPVL A + ++I Q +++ M+RV+R VGL+APQIG+P RI+ +
Sbjct: 65 QTGDPVLRCTAARVPCAQISHPDTQAVVNQMVRVLRAGCCVGLSAPQIGVPLRILAVAFP 124
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
++ P E A++ PF L + +NP+++ ++T F EGC SV GF AVV RY V
Sbjct: 125 QQMYQAVPPEVRNAREMSPFPLQIFINPEMRIVDSRTLSFPEGCSSVQGFSAVVPRYYAV 184
Query: 538 EVTGLDSNG 564
E+ G++ G
Sbjct: 185 ELQGMNPKG 193
[47][TOP]
>UniRef100_UPI0001B51D3D peptide deformylase n=1 Tax=Streptomyces viridochromogenes DSM
40736 RepID=UPI0001B51D3D
Length = 214
Score = 97.4 bits (241), Expect = 7e-19
Identities = 56/130 (43%), Positives = 75/130 (57%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V AGDPVL + D ++ E + + ++ + MR APGVGLAAPQ+G+P RI V+ED
Sbjct: 27 VAAGDPVLRRGTEPYD-GQLAPELLARFVEALRVTMRAAPGVGLAAPQVGVPLRIAVIED 85
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
P+E A+ R P V+VNP A FFEGCLSV G++AVV R +
Sbjct: 86 PAP----VPEEVRLARGRVPLPFRVLVNPAYAPVGGARAAFFEGCLSVPGWQAVVARPAE 141
Query: 535 VEVTGLDSNG 564
V +TG D +G
Sbjct: 142 VRLTGQDEHG 151
[48][TOP]
>UniRef100_UPI0000EBDAD0 PREDICTED: similar to Peptide deformylase (mitochondrial) n=1
Tax=Bos taurus RepID=UPI0000EBDAD0
Length = 250
Score = 97.1 bits (240), Expect = 9e-19
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 2/170 (1%)
Frame = +1
Query: 70 SSPSSSSSQTATVRTRAGW--FSGLTDNKKKMNLPDTVKAGDPVLHEPAQEIDPSEIKSE 243
SS + R R+ W L + P + GDP L A ++P+++
Sbjct: 38 SSTPTQDGLEGPARRRSYWRYVRRLVQGTPEPPYPRVCQVGDPALRAVAAPVEPAQLAGP 97
Query: 244 KVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDL 423
++Q++++ +++VMR+ VGL+APQ+G+P +++ LE + +A+ PF L
Sbjct: 98 ELQRLVERLVQVMRRRHCVGLSAPQLGVPLQVLALEFPETLFRACAPRVREARQMEPFPL 157
Query: 424 LVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPI 573
V VNP L+ ++ F EGC SV GF A V R+ V+++GLD G +
Sbjct: 158 RVFVNPSLRVLDSRLVTFPEGCESVAGFLACVPRFQAVQISGLDPRGEQV 207
[49][TOP]
>UniRef100_UPI00015DEEF9 UPI00015DEEF9 related cluster n=1 Tax=Mus musculus
RepID=UPI00015DEEF9
Length = 200
Score = 97.1 bits (240), Expect = 9e-19
Identities = 47/132 (35%), Positives = 79/132 (59%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
+ GDPVL A ++P ++ ++Q+++ M++VMR+ VGL+APQ+G+P +++ LE
Sbjct: 26 QVGDPVLRVVAAPVEPEQLAGPELQRLVGRMVQVMRRRGCVGLSAPQLGVPLQVLALEFP 85
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
+ + + + PF L V+VNP L+ ++ F EGC SV GF A V R+ V
Sbjct: 86 DKLLRAFSPRLRELRQMEPFPLRVLVNPSLRVLDSRLVTFPEGCESVAGFLACVPRFQAV 145
Query: 538 EVTGLDSNGAPI 573
+++GLD G P+
Sbjct: 146 QISGLDPKGEPV 157
[50][TOP]
>UniRef100_B4QV61 GD20712 n=1 Tax=Drosophila simulans RepID=B4QV61_DROSI
Length = 196
Score = 97.1 bits (240), Expect = 9e-19
Identities = 52/129 (40%), Positives = 77/129 (59%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL + A+E+ P +I S ++ +IID M++V+R VG+AAPQ+GIP RIIV+E +
Sbjct: 13 GDPVLRQRAEEVPPEDIDSREINQIIDGMVKVLRHYDCVGVAAPQVGIPLRIIVMEFREG 72
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEV 543
E + + L V +NP+L+ S++ EGC+SV G+ A VERY V +
Sbjct: 73 KQEQFKPEIYEERKMSTLPLAVFINPELEIISSQVNKHPEGCMSVRGYSAQVERYDKVRI 132
Query: 544 TGLDSNGAP 570
G+ G P
Sbjct: 133 RGIGKLGTP 141
[51][TOP]
>UniRef100_A3EQF2 Peptide deformylase n=2 Tax=Leptospirillum sp. Group II
RepID=A3EQF2_9BACT
Length = 184
Score = 96.7 bits (239), Expect = 1e-18
Identities = 53/139 (38%), Positives = 78/139 (56%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M L K G+P+L + A+ I P EI++++ Q +DDMI MR + G+GLAAPQ+ + +
Sbjct: 1 MALLKIAKMGNPILRKIAEPISPKEIETDEFQTFVDDMIETMRDSDGLGLAAPQVHVSKQ 60
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V+E E + D P LLV++NP K S +T +EGCLSVD R
Sbjct: 61 VVVIES---------MENDRYPDAPPIPLLVLINPVFKYMSKETRTGWEGCLSVDNLRGK 111
Query: 517 VERYLDVEVTGLDSNGAPI 573
V R V++ LD +G I
Sbjct: 112 VTRSRAVKMEALDRHGNTI 130
[52][TOP]
>UniRef100_B4KD11 GI23900 n=1 Tax=Drosophila mojavensis RepID=B4KD11_DROMO
Length = 234
Score = 96.7 bits (239), Expect = 1e-18
Identities = 58/165 (35%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
Frame = +1
Query: 88 SSQTATVRTRAGWFSGLTDNKKKMNLPDT---VKAGDPVLHEPAQEIDPSEIKSEKVQKI 258
S+ A ++ W+ L ++ NLP + GDPVL + A E+ + S++++ I
Sbjct: 17 STSPAASQSFRKWYQQLWTTERT-NLPPYSHFTQIGDPVLRDRAAEVPVECVDSKEIRAI 75
Query: 259 IDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVN 438
+D M+ V+RK VG+AAPQIG+ RII +E + P+ +A+ L V +N
Sbjct: 76 VDRMVHVLRKYDCVGVAAPQIGVSLRIIAMEFRRGIKKELPEAMYRARQMSELPLTVFIN 135
Query: 439 PKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPI 573
P+L + EGC+SV GF A VERY V+++GLD G P+
Sbjct: 136 PRLSVTNYTKHKHPEGCMSVRGFSAEVERYEAVKLSGLDREGEPL 180
[53][TOP]
>UniRef100_UPI000179C6B5 UPI000179C6B5 related cluster n=1 Tax=Bos taurus
RepID=UPI000179C6B5
Length = 221
Score = 96.3 bits (238), Expect = 2e-18
Identities = 46/136 (33%), Positives = 79/136 (58%)
Frame = +1
Query: 166 PDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIV 345
P + GDP L A ++P+++ ++Q++++ +++VMR+ VGL+APQ+G+P +++
Sbjct: 27 PRVCQVGDPALRAVAAPVEPAQLAGPELQRLVERLVQVMRRRHCVGLSAPQLGVPLQVLA 86
Query: 346 LEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVER 525
LE + +A+ PF L V VNP L+ ++ F EGC SV GF A V R
Sbjct: 87 LEFPETLFRACAPRVREARQMEPFPLRVFVNPSLRVLDSRLVTFPEGCESVAGFLACVPR 146
Query: 526 YLDVEVTGLDSNGAPI 573
+ V+++GLD G +
Sbjct: 147 FQAVQISGLDPRGEQV 162
[54][TOP]
>UniRef100_Q4V5F8 IP07194p (Fragment) n=2 Tax=Drosophila melanogaster
RepID=Q4V5F8_DROME
Length = 206
Score = 96.3 bits (238), Expect = 2e-18
Identities = 52/129 (40%), Positives = 77/129 (59%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL + A+E+ P +I S ++ +IID M++V+R VG+AAPQ+GIP RIIV+E +
Sbjct: 23 GDPVLRQRAEEVPPEDIDSREINQIIDGMVKVLRHYDCVGVAAPQVGIPLRIIVMEFREG 82
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEV 543
E + + L V +NP+L+ S++ EGC+SV G+ A VERY V +
Sbjct: 83 KQEQFKPEIYEERKMSILPLAVFINPELEIISSQVNKHPEGCMSVRGYSAEVERYDKVRI 142
Query: 544 TGLDSNGAP 570
G+ G P
Sbjct: 143 RGIGKLGTP 151
[55][TOP]
>UniRef100_B4PKR7 GE24677 n=1 Tax=Drosophila yakuba RepID=B4PKR7_DROYA
Length = 196
Score = 96.3 bits (238), Expect = 2e-18
Identities = 52/129 (40%), Positives = 77/129 (59%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL + A+E+ P +I S ++ +II+ M++V+R VG+AAPQ+GIP RIIV+E +
Sbjct: 13 GDPVLRQRAEEVPPEDIDSMEINQIIEGMVKVLRHYDCVGVAAPQVGIPLRIIVMEFREG 72
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEV 543
E + + L V +NP+L+ S++ EGC+SV GF A VERY V +
Sbjct: 73 KQEQFKPEVYEERKMSTLPLAVFINPELEIISSQVNKHPEGCMSVRGFSAEVERYDKVRI 132
Query: 544 TGLDSNGAP 570
G+ G P
Sbjct: 133 RGIGKLGTP 141
[56][TOP]
>UniRef100_B3P1L5 GG17275 n=1 Tax=Drosophila erecta RepID=B3P1L5_DROER
Length = 196
Score = 96.3 bits (238), Expect = 2e-18
Identities = 52/129 (40%), Positives = 77/129 (59%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL + A+E+ P +I S ++ +IID M++V+R VG+AAPQ+GIP RIIV+E +
Sbjct: 13 GDPVLRQRAEEVPPEDIDSMEINQIIDGMVKVLRHYDCVGVAAPQVGIPLRIIVMEFREG 72
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEV 543
E + + L V +NP+L+ S++ EGC+SV G+ A VERY V +
Sbjct: 73 KQEQFKPEIYEERKMSTLPLAVFINPELEIISSQVNKHPEGCMSVRGYSAQVERYDKVRI 132
Query: 544 TGLDSNGAP 570
G+ G P
Sbjct: 133 RGIGKLGTP 141
[57][TOP]
>UniRef100_Q17PR2 N-formylmethionylaminoacyl-tRNA deformylase, putative (Fragment)
n=1 Tax=Aedes aegypti RepID=Q17PR2_AEDAE
Length = 243
Score = 95.9 bits (237), Expect = 2e-18
Identities = 58/163 (35%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Frame = +1
Query: 82 SSSSQTATVRTRAGWFSGLTDNKKKMNLP--DTVKAGDPVLHEPAQEIDPSEIKSEKVQK 255
S+SSQ A+ W+ GL K P + GDPVL + A + + S +V+
Sbjct: 26 STSSQLASF---GRWYRGLWQQKSSNEPPYGHVTQIGDPVLRQTAAMVPVEAVTSPEVKY 82
Query: 256 IIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIV 435
++ M+ VMRK VGLAAPQIGI +I+V+E + E K ++ L V++
Sbjct: 83 LVKHMVHVMRKYDCVGLAAPQIGISLKILVMEFEDRLKKHYTNAEYKIKEMETLPLTVMI 142
Query: 436 NPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
NP++K + + F E C SV G+ V RY V ++GLD NG
Sbjct: 143 NPEMKITNYEKISFPESCASVKGYSGEVARYAGVLLSGLDENG 185
[58][TOP]
>UniRef100_UPI0001B575EE peptide deformylase n=1 Tax=Streptomyces sp. AA4
RepID=UPI0001B575EE
Length = 210
Score = 95.5 bits (236), Expect = 3e-18
Identities = 54/133 (40%), Positives = 75/133 (56%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+AGDPVL A+ + E+ + + +I+ M M APGVGLAAPQIG+ RI V+ED
Sbjct: 19 VQAGDPVLRAAARPYE-GELSDDTLSALIEGMKETMHAAPGVGLAAPQIGLSVRIAVVED 77
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
+ + + P V+VNP ++TA FFEGCLSV G++AVV R L
Sbjct: 78 GARERPGVAESTLATRGIVPLPFRVLVNPTYTRVGDETAAFFEGCLSVRGWQAVVARALR 137
Query: 535 VEVTGLDSNGAPI 573
+ + G D GA +
Sbjct: 138 IRLRGSDETGASL 150
[59][TOP]
>UniRef100_B4LZJ5 GJ23992 n=1 Tax=Drosophila virilis RepID=B4LZJ5_DROVI
Length = 203
Score = 95.5 bits (236), Expect = 3e-18
Identities = 50/129 (38%), Positives = 75/129 (58%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL A+E+ P + S ++ I+D M++V+R VG+AAPQ+G+P RIIV+E +
Sbjct: 20 GDPVLRVRAEEVPPERLDSHEINDIVDQMVKVLRHYDCVGVAAPQLGVPLRIIVMEFREG 79
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEV 543
+ E+ + + P L V +NPK++ ++ EGC+SV GF V RY V V
Sbjct: 80 KRAQFTAEDYEQRKMSPLPLSVFINPKIEIITDAQHTHPEGCMSVRGFSGQVARYDRVRV 139
Query: 544 TGLDSNGAP 570
TG+ G P
Sbjct: 140 TGIGMLGTP 148
[60][TOP]
>UniRef100_B4HIR5 GM26159 n=1 Tax=Drosophila sechellia RepID=B4HIR5_DROSE
Length = 196
Score = 95.5 bits (236), Expect = 3e-18
Identities = 51/129 (39%), Positives = 76/129 (58%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL + A+E+ P ++ S ++ +IID M++V+R VG+AAPQ+GIP RIIV+E +
Sbjct: 13 GDPVLRQRAEEVPPEDVDSREINQIIDGMVKVLRHYDCVGVAAPQVGIPLRIIVMEFREG 72
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEV 543
E + + L V +NP L+ S++ EGC+SV G+ A VERY V +
Sbjct: 73 KQEQFKPEIYEERKMSTLPLAVFINPVLEIISSQVNKHPEGCMSVRGYSAQVERYDKVRI 132
Query: 544 TGLDSNGAP 570
G+ G P
Sbjct: 133 RGIGKLGTP 141
[61][TOP]
>UniRef100_A9UM23 LOC100137680 protein n=1 Tax=Xenopus laevis RepID=A9UM23_XENLA
Length = 240
Score = 94.7 bits (234), Expect = 4e-18
Identities = 47/132 (35%), Positives = 78/132 (59%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
+ GDPVL A + + + Q I++ ++RV+ VG++APQ+G+P RI+ +
Sbjct: 66 QTGDPVLRCTAACVPSAHVSHPDTQAIVNQLVRVLSAGCCVGISAPQLGVPLRILAVAFP 125
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
++ P E +A++ PF L + +NP+++ +++T F EGC SV GF AVV RY V
Sbjct: 126 EQMCQAVPPEVRQAREMSPFPLQIFINPEMRILNSQTLSFPEGCSSVQGFSAVVPRYYAV 185
Query: 538 EVTGLDSNGAPI 573
E++GL+ G I
Sbjct: 186 EISGLNPKGEHI 197
[62][TOP]
>UniRef100_UPI00005A0E58 PREDICTED: similar to peptide deformylase-like protein n=1
Tax=Canis lupus familiaris RepID=UPI00005A0E58
Length = 242
Score = 93.6 bits (231), Expect = 1e-17
Identities = 44/136 (32%), Positives = 77/136 (56%)
Frame = +1
Query: 166 PDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIV 345
P + GDP L A ++P+++ ++Q+++ +++VMR+ VGL+APQ+G+P +++
Sbjct: 64 PHVCQVGDPALRTVAAPVEPAQLAGPQLQRLVQRLVQVMRRRHCVGLSAPQLGVPLQVLA 123
Query: 346 LEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVER 525
E + + + PF L V+VNP L+ ++ F EGC SV GF A V R
Sbjct: 124 FEFPEALFRACAPRLRETRQMEPFPLRVVVNPSLRVLDSRRVTFPEGCESVAGFLACVPR 183
Query: 526 YLDVEVTGLDSNGAPI 573
+ V+++GLD G +
Sbjct: 184 FQAVQISGLDPKGEQV 199
[63][TOP]
>UniRef100_A0ADS7 Peptide deformylase n=1 Tax=Streptomyces ambofaciens ATCC 23877
RepID=A0ADS7_STRAM
Length = 214
Score = 93.6 bits (231), Expect = 1e-17
Identities = 53/133 (39%), Positives = 76/133 (57%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V AGDPVL PA+ D +++ + + ++ + MR APGVGLAAPQ+G+ RI V+ED
Sbjct: 27 VAAGDPVLRRPAEPFD-GQLEPALLARFVEALRLTMRAAPGVGLAAPQVGVGLRIAVIED 85
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
P E A+ R P V+VNP + A F+EGCLSV G++AVV R+ +
Sbjct: 86 PAP----VPDEVRVARGRVPQPFRVLVNPSYEPAGPGRAAFYEGCLSVPGWQAVVARHAE 141
Query: 535 VEVTGLDSNGAPI 573
V + D +G +
Sbjct: 142 VRLVARDEHGRAV 154
[64][TOP]
>UniRef100_B4LZJ6 GJ23993 n=1 Tax=Drosophila virilis RepID=B4LZJ6_DROVI
Length = 234
Score = 93.6 bits (231), Expect = 1e-17
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 3/163 (1%)
Frame = +1
Query: 88 SSQTATVRTRAGWFSGLTDNKKKMNLPDT---VKAGDPVLHEPAQEIDPSEIKSEKVQKI 258
S+ A ++ W+ L K+ N+P + GDPVL + A + + S++VQ I
Sbjct: 17 STSLAASQSFRKWYQQLW-TMKRTNMPPYGHFTQIGDPVLRDRAAVVPAECVDSKEVQAI 75
Query: 259 IDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVN 438
+D M+ V+RK VG+AAPQIGI RII +E + + KA+ L V++N
Sbjct: 76 VDQMVHVLRKFDCVGIAAPQIGISLRIIAMEFRRSIKQDLSEATYKARQMSELPLTVLIN 135
Query: 439 PKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGA 567
PKL + EGC+SV G+ A VERY V+++G++ GA
Sbjct: 136 PKLTVTNYTKHKHPEGCMSVRGYSAEVERYEGVKLSGVNRQGA 178
[65][TOP]
>UniRef100_Q9HBH1 Peptide deformylase, mitochondrial n=1 Tax=Homo sapiens
RepID=DEFM_HUMAN
Length = 243
Score = 93.6 bits (231), Expect = 1e-17
Identities = 46/132 (34%), Positives = 77/132 (58%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
+ GDPVL A ++ +++ ++Q++ +++VMR+ VGL+APQ+G+P +++ LE
Sbjct: 69 QVGDPVLRGVAAPVERAQLGGPELQRLTQRLVQVMRRRRCVGLSAPQLGVPRQVLALELP 128
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
+ P + + PF L V VNP L+ ++ F EGC SV GF A V R+ V
Sbjct: 129 EALCRECPPRQRALRQMEPFPLRVFVNPSLRVLDSRLVTFPEGCESVAGFLACVPRFQAV 188
Query: 538 EVTGLDSNGAPI 573
+++GLD NG +
Sbjct: 189 QISGLDPNGEQV 200
[66][TOP]
>UniRef100_B8H8N2 Peptide deformylase n=1 Tax=Arthrobacter chlorophenolicus A6
RepID=B8H8N2_ARTCA
Length = 226
Score = 93.2 bits (230), Expect = 1e-17
Identities = 52/121 (42%), Positives = 73/121 (60%)
Frame = +1
Query: 163 LPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRII 342
LP V+AG P L + A D +I E++ ++I+ M +VM +APGVGLAAPQ+GIP ++
Sbjct: 28 LPPIVQAGHPALRQKAAPFD-GQITPEQLARLIELMRQVMHEAPGVGLAAPQLGIPLQLA 86
Query: 343 VLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVE 522
VLED + E ++R P D L I+NP A F+EGCLS++G +AVV
Sbjct: 87 VLEDKYD----VDHEAAALRNRAPLDFLAILNPSYTPAGPDRAAFYEGCLSLNGLQAVVS 142
Query: 523 R 525
R
Sbjct: 143 R 143
[67][TOP]
>UniRef100_Q7QFS8 AGAP003861-PA (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7QFS8_ANOGA
Length = 241
Score = 92.8 bits (229), Expect = 2e-17
Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 2/151 (1%)
Frame = +1
Query: 118 AGWFSGLTDNKKKMNLP--DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKA 291
A W+ L K P V+ GDPVL PA I E++S +VQ + + +VMR
Sbjct: 33 AKWYRSLWQPKSNDEPPYDHIVQLGDPVLRVPANAIPEKELQSAEVQYLARHLTKVMRAY 92
Query: 292 PGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTA 471
VGLAAPQ+G+ R V+E E K + K ++ P L +++NP+LK + +
Sbjct: 93 RCVGLAAPQLGLSLRAFVMEFKDELRDQYTKADYKLREMEPLPLTILLNPELKVLNYEKV 152
Query: 472 LFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
+ E C SV G+RA V RY ++ + G D+ G
Sbjct: 153 IHTEACESVRGYRADVPRYREILLQGFDATG 183
[68][TOP]
>UniRef100_B4JUW6 GH17361 n=1 Tax=Drosophila grimshawi RepID=B4JUW6_DROGR
Length = 234
Score = 92.8 bits (229), Expect = 2e-17
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 3/162 (1%)
Frame = +1
Query: 88 SSQTATVRTRAGWFSGLTDNKKKMNLPDT---VKAGDPVLHEPAQEIDPSEIKSEKVQKI 258
S+ A ++ W+ L K+ NLP + GDPVL + A E+ + S+++ I
Sbjct: 17 STSLAARQSFRKWYQQLWTTKRT-NLPPYEHFTQIGDPVLRDRAAEVPADCVNSKEIHAI 75
Query: 259 IDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVN 438
+D M+ V+RK VG+AAPQIG+ RII +E + K + L V++N
Sbjct: 76 VDQMVHVLRKFDCVGIAAPQIGVSLRIIAMEFRRSIKKDLSDATYKRRQMSELPLTVLIN 135
Query: 439 PKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
P+L + EGC+SV GF A VERY V+++GLD G
Sbjct: 136 PQLTVTNYTKHKHPEGCMSVRGFSAEVERYEGVKLSGLDRQG 177
[69][TOP]
>UniRef100_UPI0001AF1ACC peptide deformylase n=1 Tax=Streptomyces ghanaensis ATCC 14672
RepID=UPI0001AF1ACC
Length = 205
Score = 92.4 bits (228), Expect = 2e-17
Identities = 53/130 (40%), Positives = 75/130 (57%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V AGDPVL A+ D +++ + + ++ + M APGVGLAAPQ+G+ RI V+ED
Sbjct: 18 VAAGDPVLRRGAEPFD-GQLEPALLARFVEALRITMHAAPGVGLAAPQVGVALRIAVIED 76
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
P+E +A+ R P +VNP + A FFEGCLSV G++AVV R +
Sbjct: 77 PAP----VPEEVRRARGRVPQPFRALVNPSYEPVGAGRAAFFEGCLSVPGYQAVVARPAE 132
Query: 535 VEVTGLDSNG 564
V +TG D +G
Sbjct: 133 VRLTGQDEHG 142
[70][TOP]
>UniRef100_B4NAZ0 GK11287 n=1 Tax=Drosophila willistoni RepID=B4NAZ0_DROWI
Length = 241
Score = 92.4 bits (228), Expect = 2e-17
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 3/162 (1%)
Frame = +1
Query: 88 SSQTATVRTRAGWFSGLTDNKKKMNLPDT---VKAGDPVLHEPAQEIDPSEIKSEKVQKI 258
SS T ++ W+ L ++ NLP + GDPVL + A + P + S +++ I
Sbjct: 24 SSTTPACQSFKKWYQQLWTTERT-NLPPYGHFTQVGDPVLRQQAALVPPEHLDSPEIKAI 82
Query: 259 IDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVN 438
++ MI+V+RK VG+AAPQIG+ RII +E KE P+ +A+ L V++N
Sbjct: 83 VEQMIKVLRKYNCVGIAAPQIGVSLRIIAMEFKKEIRKELPEFTYQARLMSELPLTVLIN 142
Query: 439 PKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
P+L S EGC+SV G+ VERY V + G D G
Sbjct: 143 PELTVTSYVKLKHPEGCMSVRGYSGEVERYEAVNLNGHDRLG 184
[71][TOP]
>UniRef100_B4GLS5 GL12632 n=1 Tax=Drosophila persimilis RepID=B4GLS5_DROPE
Length = 196
Score = 92.4 bits (228), Expect = 2e-17
Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL + A+E+ P I + ++ +I+D M++V+R VG+AAPQ+G+P RIIV+E +E
Sbjct: 13 GDPVLRQIAEEVPPESIGTVEIDQIVDRMVKVLRHYDCVGVAAPQVGVPLRIIVME-FRE 71
Query: 364 YISYAPKEEIKAQDR-RPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVE 540
K EI A+ + L V +NP+L+ S+ EGC+SV G+ A VERY V
Sbjct: 72 GKQEQFKPEIYAERKMSTLPLAVFINPELEITSSAVNKHPEGCMSVRGYSAQVERYERVR 131
Query: 541 VTGLDSNGAP 570
+ G+ G P
Sbjct: 132 IKGIGKLGTP 141
[72][TOP]
>UniRef100_Q293Q6 GA16218 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=Q293Q6_DROPS
Length = 196
Score = 92.0 bits (227), Expect = 3e-17
Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL + A+E+ P I + ++ +I+D M++V+R VG+AAPQ+G+P RIIV+E +E
Sbjct: 13 GDPVLRQIAEEVPPESIGTVEIDQIVDRMVKVLRHYDCVGVAAPQVGVPLRIIVME-FRE 71
Query: 364 YISYAPKEEIKAQDR-RPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVE 540
K EI A+ + L V +NP+L+ S+ EGC+SV G+ A VERY V
Sbjct: 72 GKQEQFKPEIYAERKMSTLPLAVFINPELEITSSAVNKHPEGCMSVRGYSAQVERYDRVR 131
Query: 541 VTGLDSNGAP 570
+ G+ G P
Sbjct: 132 IKGIGKLGTP 141
[73][TOP]
>UniRef100_UPI000050FDC0 COG0242: N-formylmethionyl-tRNA deformylase n=1 Tax=Brevibacterium
linens BL2 RepID=UPI000050FDC0
Length = 223
Score = 91.7 bits (226), Expect = 4e-17
Identities = 49/133 (36%), Positives = 76/133 (57%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+AGDP+L + + D ++ ++ ++ + M M APGVGLA PQ+GI + V ED
Sbjct: 31 VEAGDPILRQTTRPFD-GQVDDAELAQLAEVMRATMLAAPGVGLAGPQVGIGLSMFVAED 89
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
E + + R P L V++N + +++ FFEGCLS+ G++AVV R
Sbjct: 90 PGSL----DPETAEVRQRSPMPLRVVLNAEYTPATSENVAFFEGCLSIPGYQAVVARPRS 145
Query: 535 VEVTGLDSNGAPI 573
+E+TG+D NG PI
Sbjct: 146 IELTGVDLNGTPI 158
[74][TOP]
>UniRef100_C1RK42 Peptide deformylase n=1 Tax=Cellulomonas flavigena DSM 20109
RepID=C1RK42_9CELL
Length = 230
Score = 91.3 bits (225), Expect = 5e-17
Identities = 52/133 (39%), Positives = 77/133 (57%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+AG PVL A+ D ++ ++ +++ + R MR APGVGLAAPQIG+P + V+ED
Sbjct: 31 VQAGHPVLRAMARPYD-GQVDDAELTELLALLHRTMRAAPGVGLAAPQIGLPLALAVVED 89
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
E + ++R V+VNP ++ F+EGCLSV+G++AVV R
Sbjct: 90 P----GTGDGEAARVRERPVLPYRVLVNPTYAPAGDELVAFYEGCLSVEGYQAVVPRQRA 145
Query: 535 VEVTGLDSNGAPI 573
V +TGLD GA +
Sbjct: 146 VHLTGLDETGATL 158
[75][TOP]
>UniRef100_B5HZC5 Peptide deformylase n=1 Tax=Streptomyces sviceus ATCC 29083
RepID=B5HZC5_9ACTO
Length = 218
Score = 91.3 bits (225), Expect = 5e-17
Identities = 54/133 (40%), Positives = 73/133 (54%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V AGDPVL + + D + + + ++ + M APGVGLAAPQ+G+P RI V+ED
Sbjct: 27 VAAGDPVLRQGIEHYD-GHLDGALLSRFVEALRVTMHAAPGVGLAAPQVGVPLRIAVIED 85
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
P+E A+ R P V+VNP A FFEGCLSV G++AVV R +
Sbjct: 86 PAP----VPEEIRLARGRVPQPFRVLVNPSYAPVGTPRAAFFEGCLSVPGWQAVVARPAE 141
Query: 535 VEVTGLDSNGAPI 573
V +T D NG +
Sbjct: 142 VRLTCEDENGRAV 154
[76][TOP]
>UniRef100_UPI0001925FA6 PREDICTED: similar to predicted protein, partial n=1 Tax=Hydra
magnipapillata RepID=UPI0001925FA6
Length = 196
Score = 90.9 bits (224), Expect = 6e-17
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL + A+E+ I ++ + +I MI +MR G G+AAPQ+G+ ++I +E T+
Sbjct: 27 GDPVLRKVAREVPLEYINTQDFKDLITKMILIMRSNKGQGIAAPQVGVDLQVIAIEFTEH 86
Query: 364 YISYAPKE----EIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYL 531
+ A K+ E++ + R F L + +NPKLK + +T F EGCLS+ G VV+RY
Sbjct: 87 DLEMATKQYGKNEVEKRQMRTFPLHIFINPKLKIINYETTRFEEGCLSILGTVGVVQRYR 146
Query: 532 DVEVTGLDSNGAPI 573
+V++ ++ G +
Sbjct: 147 EVQLEFVNEKGVNV 160
[77][TOP]
>UniRef100_A9G9J7 Peptide deformylase n=1 Tax=Sorangium cellulosum 'So ce 56'
RepID=A9G9J7_SORC5
Length = 191
Score = 90.9 bits (224), Expect = 6e-17
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M L G+PVL + A+E+ E+ S +Q IDD++ MR A G G+AA Q+ +P R
Sbjct: 1 MTLLKIAHIGNPVLRQRAREVTEEELSSPAMQAFIDDLVETMRDANGAGIAATQVHVPVR 60
Query: 337 IIVLE--DTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFR 510
I +E D Y Y P L V+VNP ++ + +T +EGCLSV R
Sbjct: 61 IFAVEVQDNPRY-PYKPN----------IPLTVVVNPVIEPLTQETFENYEGCLSVPNLR 109
Query: 511 AVVERYLDVEVTGLDSNGAPI 573
VV+R ++ +TGLD G PI
Sbjct: 110 GVVDRTTEIRLTGLDREGRPI 130
[78][TOP]
>UniRef100_C9K9B5 N-formylmethionyl-tRNA deformylase n=1 Tax=Sanguibacter keddieii
DSM 10542 RepID=C9K9B5_9MICO
Length = 211
Score = 90.9 bits (224), Expect = 6e-17
Identities = 54/130 (41%), Positives = 73/130 (56%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+AG PVL +PA D + + ++D M M APGVGLAAPQIGI +I VL D
Sbjct: 26 VQAGHPVLRQPAAAYDGQ--LGDLLPALLDSMRLTMVDAPGVGLAAPQIGIGLQIAVLHD 83
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
P+E R P + V+VNP + ++ F+EGCLSV+G++AVV R+
Sbjct: 84 AGSTDPEDPRE------RTPLEHRVLVNPSYEGVGDEVRSFYEGCLSVEGYQAVVARHRT 137
Query: 535 VEVTGLDSNG 564
V +TG D G
Sbjct: 138 VRLTGQDETG 147
[79][TOP]
>UniRef100_B4NAZ1 GK11285 n=1 Tax=Drosophila willistoni RepID=B4NAZ1_DROWI
Length = 173
Score = 90.5 bits (223), Expect = 8e-17
Identities = 50/129 (38%), Positives = 75/129 (58%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL A+E+ ++ S ++++ ID M+ V+R VG+AAPQIG+P RIIV+E +
Sbjct: 13 GDPVLRRRAEEVSGDKVNSPEIKETIDCMVHVLRHYDCVGVAAPQIGVPLRIIVMEFHEG 72
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEV 543
+ P E + L V +NP+L+ ++K EGC+SV G+ A VER+ V V
Sbjct: 73 KKNQFPAEIYAERKMSTLSLAVFINPELEILNDKQHKHPEGCMSVRGYSAQVERHDRVRV 132
Query: 544 TGLDSNGAP 570
G+ G P
Sbjct: 133 KGIGMMGTP 141
[80][TOP]
>UniRef100_B4JUW5 GH17360 n=1 Tax=Drosophila grimshawi RepID=B4JUW5_DROGR
Length = 203
Score = 89.7 bits (221), Expect = 1e-16
Identities = 48/129 (37%), Positives = 75/129 (58%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL A+E+ I S++++ I++ M++V+R VG+AAPQ+G+P RIIV+E +
Sbjct: 20 GDPVLRLCAEEVSAERIASQEIKDIVEQMVKVLRHYDCVGVAAPQLGVPMRIIVMEFREG 79
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEV 543
E + + L + +NP+++ S+K EGC+SV G+ A V RY V V
Sbjct: 80 KREQFTPEVYEERKMSHLPLTIFINPQIEIISDKQHTHPEGCMSVRGYSAKVSRYDRVRV 139
Query: 544 TGLDSNGAP 570
TG+ G P
Sbjct: 140 TGIGILGTP 148
[81][TOP]
>UniRef100_B4GLS6 GL12633 n=1 Tax=Drosophila persimilis RepID=B4GLS6_DROPE
Length = 238
Score = 89.4 bits (220), Expect = 2e-16
Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 3/171 (1%)
Frame = +1
Query: 58 NLTLSSPSSSSSQTATVRTRAGWFSGLTDNKKKMNLPDT---VKAGDPVLHEPAQEIDPS 228
NL+ PS+ S + W+ L ++ NLP + GDPVL + A +
Sbjct: 19 NLSTGLPSAQSFRK--------WYQQLWTTERT-NLPPYNHFTQIGDPVLRQQAAAVPLE 69
Query: 229 EIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDR 408
I+ +++ I++ M++V+RK VG+AAPQIG+ RII +E K P+ +A+
Sbjct: 70 LIEGPEIEAIVEQMVKVLRKYNCVGIAAPQIGVSLRIIAMEFKKSLQKEMPEAVYQARQM 129
Query: 409 RPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSN 561
L V++NP L + EGC+SV GF A VER+ V+++GLD +
Sbjct: 130 SELPLTVMINPVLTVTNYSKLKHPEGCMSVRGFSAEVERFEGVKLSGLDKS 180
[82][TOP]
>UniRef100_B3LWH4 GF17444 n=1 Tax=Drosophila ananassae RepID=B3LWH4_DROAN
Length = 238
Score = 89.4 bits (220), Expect = 2e-16
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 3/162 (1%)
Frame = +1
Query: 88 SSQTATVRTRAGWFSGLTDNKKKMNLPDT---VKAGDPVLHEPAQEIDPSEIKSEKVQKI 258
++ +A+ ++ W+ L ++ NLP + GDPVL + A + I S +V+ I
Sbjct: 21 ATSSASAQSFRKWYQQLWA-PERTNLPPYSHFTQIGDPVLRQKAAPVPQEHILSPEVEAI 79
Query: 259 IDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVN 438
++ M+RV+RK VG+AAPQIG+ RII +E P+ +A+ L V +N
Sbjct: 80 VEKMVRVLRKYDCVGIAAPQIGVSLRIIAMEFKGSIRKELPEAVYQARQMTELPLTVFIN 139
Query: 439 PKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
P L + EGC+SV GF A VER+ V ++G + NG
Sbjct: 140 PVLTVTNYTKLKHPEGCMSVRGFSADVERFEGVSISGSNGNG 181
[83][TOP]
>UniRef100_Q8G534 Peptide deformylase 1 n=4 Tax=Bifidobacterium longum
RepID=DEF1_BIFLO
Length = 217
Score = 89.4 bits (220), Expect = 2e-16
Identities = 56/142 (39%), Positives = 83/142 (58%)
Frame = +1
Query: 139 TDNKKKMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQ 318
T K+K+ LP V+AG+PVL + + ++ + K+ID M M +APGVGLAA Q
Sbjct: 22 TGGKEKL-LP-IVQAGEPVLRQRTVAYN-GQLSKRTLAKLIDTMHTTMLEAPGVGLAATQ 78
Query: 319 IGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSV 498
IG+ + V+ED + +E ++ F VI+NP K S+KTA F+EGCLS
Sbjct: 79 IGLGLALAVVED------HVRDDEDDPREIAEFPFHVIINPSYKPTSDKTASFYEGCLSF 132
Query: 499 DGFRAVVERYLDVEVTGLDSNG 564
DG++AV +R+LD+ D +G
Sbjct: 133 DGYQAVRKRWLDITAEWDDEDG 154
[84][TOP]
>UniRef100_B7GUF1 Peptide deformylase n=1 Tax=Bifidobacterium longum subsp. infantis
ATCC 15697 RepID=B7GUF1_BIFLI
Length = 217
Score = 89.0 bits (219), Expect = 2e-16
Identities = 56/142 (39%), Positives = 83/142 (58%)
Frame = +1
Query: 139 TDNKKKMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQ 318
T K+K+ LP V+AG+PVL + + ++ + K+ID M M +APGVGLAA Q
Sbjct: 22 TGGKEKI-LP-IVQAGEPVLRQRTVAYN-GQLSKRTLAKLIDTMHTTMLEAPGVGLAATQ 78
Query: 319 IGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSV 498
IG+ + V+ED + +E ++ F VI+NP K S+KTA F+EGCLS
Sbjct: 79 IGLGLALAVVED------HVRDDEDDPREIAEFPFHVIINPSYKPTSDKTASFYEGCLSF 132
Query: 499 DGFRAVVERYLDVEVTGLDSNG 564
DG++AV +R+LD+ D +G
Sbjct: 133 DGYQAVRKRWLDITAEWDDEDG 154
[85][TOP]
>UniRef100_C1WPD2 Peptide deformylase n=1 Tax=Kribbella flavida DSM 17836
RepID=C1WPD2_9ACTO
Length = 258
Score = 89.0 bits (219), Expect = 2e-16
Identities = 51/131 (38%), Positives = 73/131 (55%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+ GDPVL A+ D + ++ ++ + R M APGVGLAAPQ+G+P RI VLED
Sbjct: 71 VQLGDPVLRRKAEPFD-GQFDDGLLKDFVELLRRTMLAAPGVGLAAPQVGVPLRIAVLED 129
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
+ E +A++R P + L ++NP+ + F+EGCLS+ GF VV R L
Sbjct: 130 P----ATVSAEVAEARERYPLEFLAVLNPEYAPRGRDKRGFYEGCLSMPGFTGVVSRPLK 185
Query: 535 VEVTGLDSNGA 567
V+ D GA
Sbjct: 186 VDAGYSDLTGA 196
[86][TOP]
>UniRef100_UPI0001B501DC peptide deformylase n=1 Tax=Streptomyces hygroscopicus ATCC 53653
RepID=UPI0001B501DC
Length = 225
Score = 88.6 bits (218), Expect = 3e-16
Identities = 53/130 (40%), Positives = 74/130 (56%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V AG PVL + A D ++ ++ +++ M M APGVGLAAPQIG+P R+ V+ED
Sbjct: 23 VSAGLPVLRQAALPYD-GQLPDGQLDRLLRAMRETMHNAPGVGLAAPQIGVPLRLAVIED 81
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
E + E +A+ R P V+VNP + + A FFEGCLSV G++AVV R
Sbjct: 82 PAEVAT----EVREARGRVPQPYRVLVNPSYEPVGDARAAFFEGCLSVPGWQAVVSRPER 137
Query: 535 VEVTGLDSNG 564
+ + G D G
Sbjct: 138 IRLRGQDETG 147
[87][TOP]
>UniRef100_A0JX03 Peptide deformylase n=1 Tax=Arthrobacter sp. FB24
RepID=A0JX03_ARTS2
Length = 226
Score = 88.6 bits (218), Expect = 3e-16
Identities = 51/134 (38%), Positives = 72/134 (53%)
Frame = +1
Query: 163 LPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRII 342
LP V+AG PVL + A + ++ ++ +I M VM APGVGLAAPQ+GIP ++
Sbjct: 28 LPAIVQAGHPVLRQQAAPYE-GQLDGTELAALIALMREVMHDAPGVGLAAPQLGIPLQLA 86
Query: 343 VLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVE 522
VLED + E + R P + ++NP TA F+EGCLS+ G +AVV
Sbjct: 87 VLEDQYD----VDAETAAVRHRSPLEFFAVINPSYSPLGTGTAAFYEGCLSLQGLQAVVS 142
Query: 523 RYLDVEVTGLDSNG 564
R+ V + D G
Sbjct: 143 RHETVRLDFTDPGG 156
[88][TOP]
>UniRef100_Q293Q5 GA16144 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=Q293Q5_DROPS
Length = 238
Score = 88.6 bits (218), Expect = 3e-16
Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 3/171 (1%)
Frame = +1
Query: 58 NLTLSSPSSSSSQTATVRTRAGWFSGLTDNKKKMNLPDT---VKAGDPVLHEPAQEIDPS 228
NL+ PS+ S + W+ L ++ NLP + GDPVL + A +
Sbjct: 19 NLSTGLPSAQSFRK--------WYQQLWITERT-NLPPYNHFTQIGDPVLRQQAAAVPLE 69
Query: 229 EIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDR 408
I+ +++ I++ M++V+RK VG+AAPQIG+ RII +E K P+ +A+
Sbjct: 70 LIEGPEIEAIVEQMVKVLRKYNCVGIAAPQIGVSLRIIAMEFKKSLQKEMPEAVYQARQM 129
Query: 409 RPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSN 561
L V++NP L + EGC+SV GF A VER+ V+++GLD +
Sbjct: 130 SELPLTVMINPVLTVTNYSKLKHPEGCMSVRGFSAEVERFEGVKLSGLDKS 180
[89][TOP]
>UniRef100_Q825U9 Peptide deformylase 3 n=1 Tax=Streptomyces avermitilis
RepID=DEF3_STRAW
Length = 224
Score = 88.6 bits (218), Expect = 3e-16
Identities = 53/133 (39%), Positives = 74/133 (55%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V AGDPVL A+ D ++ + + ++ + M APGVGLAAPQ+G+ RI V+ED
Sbjct: 36 VAAGDPVLRRGAEPYD-GQLGPGLLARFVEALRLTMHAAPGVGLAAPQVGVGLRIAVIED 94
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
P+E + R P V+VNP + + A FFEGCLSV G++AVV R
Sbjct: 95 PAP----VPEEVGAVRGRVPQPFRVLVNPSYEAVGSDRAAFFEGCLSVPGWQAVVARPAR 150
Query: 535 VEVTGLDSNGAPI 573
V +T LD +G +
Sbjct: 151 VRLTALDEHGRAV 163
[90][TOP]
>UniRef100_UPI0001B4CA19 peptide deformylase n=1 Tax=Streptomyces lividans TK24
RepID=UPI0001B4CA19
Length = 222
Score = 88.2 bits (217), Expect = 4e-16
Identities = 51/133 (38%), Positives = 73/133 (54%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V AGDPVL A+ D ++ ++ ++ + M APGVGLAAPQ+G+ R+ V+ED
Sbjct: 31 VAAGDPVLRRAAEPYD-GQVAPALFERFVEALRLTMHAAPGVGLAAPQVGVGLRVAVIED 89
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
P E A+ R P V+VNP + A FFEGCLSV G++AVV R+ +
Sbjct: 90 PAP----VPDEVRVARGRVPQPFRVLVNPSYEPAGAGRAAFFEGCLSVPGWQAVVARHAE 145
Query: 535 VEVTGLDSNGAPI 573
V + D +G +
Sbjct: 146 VRLRAHDEHGRAV 158
[91][TOP]
>UniRef100_B3LWH5 GF17443 n=1 Tax=Drosophila ananassae RepID=B3LWH5_DROAN
Length = 196
Score = 88.2 bits (217), Expect = 4e-16
Identities = 51/129 (39%), Positives = 73/129 (56%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL + A+E+ I S ++ +I+D M++V+R VG+AAPQIGIP RIIV+E +
Sbjct: 13 GDPVLRQRAEEVPEERIDSPEIDQIVDRMVKVLRHYDCVGVAAPQIGIPLRIIVMEFREG 72
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEV 543
E + + L V VNP+L+ S + EGC+SV G+ A V R+ V V
Sbjct: 73 KREQYKPEIYEERKMSTLPLAVFVNPELEIVSGQINKHPEGCMSVRGYSAEVGRFDKVRV 132
Query: 544 TGLDSNGAP 570
G+ G P
Sbjct: 133 RGVGKLGTP 141
[92][TOP]
>UniRef100_Q9RD27 Peptide deformylase 1 n=1 Tax=Streptomyces coelicolor
RepID=DEF1_STRCO
Length = 218
Score = 88.2 bits (217), Expect = 4e-16
Identities = 51/133 (38%), Positives = 73/133 (54%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V AGDPVL A+ D ++ ++ ++ + M APGVGLAAPQ+G+ R+ V+ED
Sbjct: 27 VAAGDPVLRRAAEPYD-GQVAPALFERFVEALRLTMHAAPGVGLAAPQVGVGLRVAVIED 85
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
P E A+ R P V+VNP + A FFEGCLSV G++AVV R+ +
Sbjct: 86 PAP----VPDEVRVARGRVPQPFRVLVNPSYEPAGAGRAAFFEGCLSVPGWQAVVARHAE 141
Query: 535 VEVTGLDSNGAPI 573
V + D +G +
Sbjct: 142 VRLRAHDEHGRAV 154
[93][TOP]
>UniRef100_B4KD10 GI23899 n=1 Tax=Drosophila mojavensis RepID=B4KD10_DROMO
Length = 203
Score = 87.8 bits (216), Expect = 5e-16
Identities = 49/129 (37%), Positives = 71/129 (55%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL + E+ P + S+++ I+D M++V+R VG+AAPQ+G+P RII +E +E
Sbjct: 20 GDPVLRIRSDEVSPERLDSKEILGIVDQMVKVLRHYDCVGVAAPQLGVPLRIIAMEFREE 79
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEV 543
E + L V +NPK++ + EGC+SV GF A V RY V V
Sbjct: 80 KREQFTPEVYLQRKMSTLPLSVFINPKIEIIGDMQHTQPEGCMSVRGFSARVARYDRVRV 139
Query: 544 TGLDSNGAP 570
TG+ G P
Sbjct: 140 TGIGMLGTP 148
[94][TOP]
>UniRef100_B4PKR6 GE24678 n=1 Tax=Drosophila yakuba RepID=B4PKR6_DROYA
Length = 238
Score = 87.4 bits (215), Expect = 7e-16
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 3/179 (1%)
Frame = +1
Query: 37 PISKPPLNLTLSSPSSSSSQTATVRTRAGWFSGLTDNKKKMNLPDT---VKAGDPVLHEP 207
P+ K + S S +S A+ +T W+ L ++ NLP + GDPVL +
Sbjct: 5 PLMKVCQGIVGQSRSFGTSPAAS-QTFRKWYQQLWTTERT-NLPPYNHFTQIGDPVLRQQ 62
Query: 208 AQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKE 387
A + + S +++ I++ M++V+RK VG+AAPQIG+ RII +E P+
Sbjct: 63 AAVVPKEHLDSPELKAIVERMVKVLRKFDCVGIAAPQIGVSLRIIAMEFKGRIRKELPEA 122
Query: 388 EIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
+ + L V +NP L + EGC+SV G+ A VER+ V++TGLD G
Sbjct: 123 VYQTRQMSELPLTVFINPVLTVTNYTKLKHPEGCMSVRGYSAEVERFEGVKLTGLDQQG 181
[95][TOP]
>UniRef100_B3P1L6 GG17276 n=1 Tax=Drosophila erecta RepID=B3P1L6_DROER
Length = 238
Score = 87.0 bits (214), Expect = 9e-16
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 3/141 (2%)
Frame = +1
Query: 151 KKMNLPDT---VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQI 321
++ NLP + GDP+L + A + + S +++ I++ M++V+RK VG+AAPQI
Sbjct: 41 ERTNLPPYNHFTQIGDPILRQQAALVPKEHLDSPEIKAIVERMVKVLRKFECVGIAAPQI 100
Query: 322 GIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVD 501
G+ RII +E P+ +A+ L V++NP L + EGC+SV
Sbjct: 101 GVSLRIIAMEFKGRVRKELPEVVYQARQMSELPLTVLINPVLTVTNYTKLKHPEGCMSVR 160
Query: 502 GFRAVVERYLDVEVTGLDSNG 564
G+ A VER+ V++TGLD G
Sbjct: 161 GYSAEVERFEGVKLTGLDQQG 181
[96][TOP]
>UniRef100_UPI00018A0305 hypothetical protein BIFGAL_00593 n=1 Tax=Bifidobacterium gallicum
DSM 20093 RepID=UPI00018A0305
Length = 221
Score = 86.7 bits (213), Expect = 1e-15
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+ GDPVL A+ ++ ++ + K+I+ M M APGVG+AAPQIG+ V+ED
Sbjct: 35 VEVGDPVLRAQAEPY-VGQLSAKTLAKLIEAMRVTMLDAPGVGVAAPQIGLSLAFAVVED 93
Query: 355 -TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYL 531
T E P+E + F VI+NP +KTA FFEGCLS GF+AV ERY+
Sbjct: 94 HTSEEYDDDPREFAE------FPFHVIINPSYDPVGDKTAKFFEGCLSFPGFQAVRERYV 147
Query: 532 DVEVTGLDSNG 564
D+ D G
Sbjct: 148 DIMAHWTDEQG 158
[97][TOP]
>UniRef100_B4HIR6 GM26160 n=1 Tax=Drosophila sechellia RepID=B4HIR6_DROSE
Length = 238
Score = 86.3 bits (212), Expect = 2e-15
Identities = 52/150 (34%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Frame = +1
Query: 124 WFSGLTDNKKKMNLPDT---VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAP 294
W+ L ++ NLP + GDPVL + A + + S +++ I++ M++V+RK
Sbjct: 33 WYQQLWTTERT-NLPPYNHFTQIGDPVLRQQAALVPKEHMDSPEIKAIVERMVKVLRKFD 91
Query: 295 GVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTAL 474
VG+AAPQIG+ RII +E P+ +A+ L V +NP L +
Sbjct: 92 CVGIAAPQIGVSLRIIAMEFKGRIRKELPEAVYQARQMSELPLTVFINPVLTVTNYSKLK 151
Query: 475 FFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
EGC+SV G+ A VER+ V++TGLD G
Sbjct: 152 HPEGCMSVRGYSAEVERFEGVKLTGLDQLG 181
[98][TOP]
>UniRef100_B9ATQ5 Peptide deformylase n=1 Tax=Bifidobacterium breve DSM 20213
RepID=B9ATQ5_BIFBR
Length = 217
Score = 85.9 bits (211), Expect = 2e-15
Identities = 53/138 (38%), Positives = 77/138 (55%)
Frame = +1
Query: 151 KKMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIP 330
K+ LP V+AG+PVL + + ++ + K+ID M M +APGVGLAA QIG+
Sbjct: 25 KEQILP-IVQAGEPVLRQQTVAYN-GQLSKRTLAKLIDTMHTTMLEAPGVGLAATQIGLG 82
Query: 331 SRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFR 510
+ V+ED + +E ++ F VI+NPK KT FFEGCLS DG++
Sbjct: 83 LALAVVED------HVRDDEDDPREIAEFPFHVIINPKYTPVGEKTTSFFEGCLSFDGYQ 136
Query: 511 AVVERYLDVEVTGLDSNG 564
AV +R+LD+ D +G
Sbjct: 137 AVRKRWLDITAEWDDEDG 154
[99][TOP]
>UniRef100_B4QV62 GD20713 n=1 Tax=Drosophila simulans RepID=B4QV62_DROSI
Length = 239
Score = 85.9 bits (211), Expect = 2e-15
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
Frame = +1
Query: 124 WFSGLTDNKKKMNLPDT---VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAP 294
W+ L ++ NLP + GDPVL + A + + S ++ I++ M++V+RK
Sbjct: 33 WYQQLWTTERT-NLPPYNHFTQIGDPVLRQQAALVPKEHMDSPEIGAIVEQMVKVLRKFD 91
Query: 295 GVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTAL 474
VG+AAPQIG+ RII +E P+ +A+ L V +NP L +
Sbjct: 92 CVGIAAPQIGVSLRIIAMEFKGRIRKELPEAVYQARQMSELPLTVFINPVLTVTNYSKLK 151
Query: 475 FFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
EGC+SV G+ A VER+ V++TGLD G
Sbjct: 152 HPEGCMSVRGYSAEVERFEGVKLTGLDQLG 181
[100][TOP]
>UniRef100_C9Z4X3 Polypeptide deformylase n=1 Tax=Streptomyces scabiei 87.22
RepID=C9Z4X3_STRSC
Length = 218
Score = 85.5 bits (210), Expect = 3e-15
Identities = 52/133 (39%), Positives = 71/133 (53%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V AGDPVL A+ D ++ + + + + M APGVGLAAPQ+G+ RI V+ED
Sbjct: 30 VAAGDPVLRRTAEPFD-GQLDPALLARFVAALRATMHAAPGVGLAAPQVGVSLRIAVIED 88
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
P+E A+ R P V+VNP + FFEGCLSV G++AVV R+
Sbjct: 89 PAP----VPEEVRLARGRVPQPFRVLVNPAYEAVGPFRDAFFEGCLSVPGWQAVVARHAR 144
Query: 535 VEVTGLDSNGAPI 573
V + LD G +
Sbjct: 145 VRLRALDERGRAV 157
[101][TOP]
>UniRef100_Q9VGY2 CG31278 n=1 Tax=Drosophila melanogaster RepID=Q9VGY2_DROME
Length = 238
Score = 85.5 bits (210), Expect = 3e-15
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Frame = +1
Query: 124 WFSGLTDNKKKMNLPDT---VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAP 294
W+ L ++ NLP + GDPVL + A + + S +++ I++ M++V+RK
Sbjct: 33 WYQHLWTTERT-NLPPYNHFTQIGDPVLRQQAALVPKEHMASPEIKAIVERMVKVLRKFD 91
Query: 295 GVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTAL 474
VG+AAPQIG+ RII +E P+ +A+ L + +NP L +
Sbjct: 92 CVGIAAPQIGVSLRIIAMEFKGRIRKELPEAVYQARQMSELPLTIFINPVLTVTNYAKLK 151
Query: 475 FFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
EGC+SV G+ A VER+ V++TGLD G
Sbjct: 152 HPEGCMSVRGYSAEVERFEGVKLTGLDQLG 181
[102][TOP]
>UniRef100_UPI0001924378 PREDICTED: similar to peptide deformylase-like protein n=1
Tax=Hydra magnipapillata RepID=UPI0001924378
Length = 212
Score = 85.1 bits (209), Expect = 4e-15
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Frame = +1
Query: 124 WFSGLTDNKKKMNLPDTVKA---GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAP 294
W S L +N K DT K GDPVL + A+ +D + I + +K+ D ++ +R+
Sbjct: 17 WTSNLINNFTK----DTHKVRQIGDPVLRQVAKPVDLATIVTPDFKKLCDRLVSTLRRHN 72
Query: 295 GVGLAAPQIGIPSRIIVLE----DTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSN 462
G G+AAPQIG+P ++I +E D K + + + F L V++NPK+K
Sbjct: 73 GCGIAAPQIGVPLQVIAVEFTGYDLKVAMDKYGSKGVSKLQMSLFPLKVMINPKIKIIDP 132
Query: 463 KTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
EGCLSV G+RA+V R ++EV L+ +G
Sbjct: 133 TMLALKEGCLSVKGYRAMVPRAKEIEVEMLNVSG 166
[103][TOP]
>UniRef100_C6HVL5 Peptide deformylase n=1 Tax=Leptospirillum ferrodiazotrophum
RepID=C6HVL5_9BACT
Length = 184
Score = 85.1 bits (209), Expect = 4e-15
Identities = 46/139 (33%), Positives = 75/139 (53%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M L K G+PVL + ++ + EI + Q+ +DDMI M+ G+GLAAPQ+ + +
Sbjct: 1 MALLKIAKMGNPVLRKISEPVSKEEIARPEFQRFLDDMIETMKDEDGLGLAAPQVHVSKQ 60
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++++E ++ +++D P LLV++NP K S +T +EGCLS+D R
Sbjct: 61 VVIIESL---------DDPRSEDGPPTPLLVLINPVFKYMSKETRTGWEGCLSLDNLRGK 111
Query: 517 VERYLDVEVTGLDSNGAPI 573
V R V++ L G I
Sbjct: 112 VTRSRAVKLEALGRKGETI 130
[104][TOP]
>UniRef100_UPI00017934F1 PREDICTED: similar to N-formylmethionylaminoacyl-tRNA deformylase,
putative n=1 Tax=Acyrthosiphon pisum RepID=UPI00017934F1
Length = 213
Score = 84.3 bits (207), Expect = 6e-15
Identities = 50/130 (38%), Positives = 75/130 (57%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+ GDPVL A + +I +++VQ +I M +M+K+ +GLAAPQ+GIP +I V+
Sbjct: 28 VQIGDPVLRNKASPVPLEKIGTKEVQNLIYIMKSLMKKSNLIGLAAPQVGIPFQIFVIHF 87
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
+ Y KEEI + + V +NP+LK +++ F E C S G+ A V RY
Sbjct: 88 PRP-SHYFSKEEILLKGMEHVENQVWINPELKVLNHEKVTFNESCASFKGYSADVPRYKR 146
Query: 535 VEVTGLDSNG 564
V +TG+D NG
Sbjct: 147 VLLTGIDENG 156
[105][TOP]
>UniRef100_B0SHH1 Peptide deformylase n=2 Tax=Leptospira biflexa serovar Patoc
RepID=DEF_LEPBA
Length = 179
Score = 84.3 bits (207), Expect = 6e-15
Identities = 46/129 (35%), Positives = 73/129 (56%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
+K G+P+L + ++++ SEI+++ +K+I DM MR A GVGLAAPQIG+ +++V+
Sbjct: 7 LKIGNPILRQTSEDVSESEIQTKDFKKLIRDMFETMRHADGVGLAAPQIGVLKKLVVVGQ 66
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
+ Y E+ Q +I+NP++ S F+EGCLSV G R VER
Sbjct: 67 EDDNERYPGTPEVPNQ--------IILNPEITPLSPPRDGFWEGCLSVPGMRGYVERPNK 118
Query: 535 VEVTGLDSN 561
+ + D N
Sbjct: 119 IRMKWRDEN 127
[106][TOP]
>UniRef100_Q2Z018 Peptide deformylase n=1 Tax=uncultured Chloroflexi bacterium
RepID=Q2Z018_9CHLR
Length = 176
Score = 84.0 bits (206), Expect = 8e-15
Identities = 50/139 (35%), Positives = 78/139 (56%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M++ + V DPVL A+++ ++Q +IDDM+ MR APGVGLAAPQ+ +
Sbjct: 1 MSIREIVFTPDPVLRRKARKVTDF---GPELQTLIDDMVETMRSAPGVGLAAPQVAESWQ 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
+I +E ++E +E + +++ P L +VNP++ SN+T + EGCLSV G
Sbjct: 58 VITIEYSEE-----SEEGEEGEEKVPPKLYTLVNPQITRASNETIVGTEGCLSVPGIVGE 112
Query: 517 VERYLDVEVTGLDSNGAPI 573
VER V V + G P+
Sbjct: 113 VERNEAVTVKAQNRRGQPV 131
[107][TOP]
>UniRef100_B8DWH8 Peptide deformylase n=4 Tax=Bifidobacterium animalis subsp. lactis
RepID=B8DWH8_BIFA0
Length = 217
Score = 84.0 bits (206), Expect = 8e-15
Identities = 50/130 (38%), Positives = 69/130 (53%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+AG+PVL E D ++ + K+I+ M + M APGVGLA PQIG+ I V+ED
Sbjct: 31 VEAGEPVLREQCVRYD-GQLSKHTLHKLIETMHKTMLDAPGVGLAGPQIGLNLAIAVVED 89
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
EI F I+NP + +T F+EGCLS DG++AV +RYLD
Sbjct: 90 HANGDDDGDPREIAE-----FPFHAIINPVYRPAGEETRSFYEGCLSFDGYQAVRKRYLD 144
Query: 535 VEVTGLDSNG 564
+ D +G
Sbjct: 145 IIAHWHDEDG 154
[108][TOP]
>UniRef100_UPI000051A696 PREDICTED: similar to CG31373-PA n=1 Tax=Apis mellifera
RepID=UPI000051A696
Length = 224
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/129 (34%), Positives = 75/129 (58%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
+ G+PVL + A ID I++++ QKI+D + +++K VGLAAPQIG+P ++ V+E T
Sbjct: 52 QVGNPVLRQKASFIDEKIIQTQEFQKILDHLYELLKKNDTVGLAAPQIGLPWQLFVVEMT 111
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
+E I + K P L +NPK+ +++ + FE C S+D + A V R +V
Sbjct: 112 EESIEHIHPYIRKCYGITPHPLTYFINPKMNIINSEEVVHFETCASIDCYYAEVPRPKEV 171
Query: 538 EVTGLDSNG 564
++ L+ G
Sbjct: 172 QIEALNKFG 180
[109][TOP]
>UniRef100_Q72S74 Peptide deformylase n=2 Tax=Leptospira interrogans RepID=DEF_LEPIC
Length = 178
Score = 83.6 bits (205), Expect = 1e-14
Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M++ ++ GDP+L + ++ + EI++++ +K+I DM MR A GVGLAAPQIGI +
Sbjct: 1 MSVRKILRMGDPILRKISEPVTEDEIQTKEFKKLIRDMFDTMRHAEGVGLAAPQIGILKQ 60
Query: 337 IIVL--EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFR 510
I+V+ ED + Y E +I+NP + + T+ F+EGCLSV G R
Sbjct: 61 IVVVGSEDNERYPGTPDVPE-----------RIILNPVITPLTKDTSGFWEGCLSVPGMR 109
Query: 511 AVVERYLDVEVTGLDSNG 564
VER + + +D G
Sbjct: 110 GYVERPNQIRMQWMDEKG 127
[110][TOP]
>UniRef100_UPI0000D573B0 PREDICTED: similar to N-formylmethionylaminoacyl-tRNA deformylase,
putative n=1 Tax=Tribolium castaneum RepID=UPI0000D573B0
Length = 223
Score = 82.8 bits (203), Expect = 2e-14
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Frame = +1
Query: 76 PSSSSSQTATVRTRAGWFSGLTDNKK-KMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQ 252
PS + + + + W+SGL K + V+ GDP L + I IK +++
Sbjct: 2 PSVTQVRPLSYKRIISWYSGLVKAKPPEAPFKHVVQIGDPTLRTVSDVIPRDLIKLPEIK 61
Query: 253 KIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLE-DTKEYISYAPKEEIKAQDRRPFDLLV 429
+I+ M VM+ VGL+APQ+G+P ++ ++E + K Y+P+E+ K ++ + V
Sbjct: 62 FLINRMKNVMKNHNSVGLSAPQVGVPLQLFLVECNAKHLNEYSPQEQ-KVKEMKVVPFKV 120
Query: 430 IVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLD 555
++NP++K F E C SV GF A V RY +++ D
Sbjct: 121 VINPQIKITDYTKLTFVESCASVKGFHAEVPRYKSLKLEAFD 162
[111][TOP]
>UniRef100_C0VBE5 Peptide deformylase n=1 Tax=Xylanimonas cellulosilytica DSM 15894
RepID=C0VBE5_9MICO
Length = 223
Score = 82.4 bits (202), Expect = 2e-14
Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V++GDPVL PA + + ++ + M R M APGVGLAAPQ+GI + V+ED
Sbjct: 33 VQSGDPVLRTPAAPYTGQ--LGDLLPRLAEVMRRTMHAAPGVGLAAPQVGIGLALAVVED 90
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSN-------KTALFFEGCLSVDGFRA 513
E ++R P ++ NP + + + FFEGCLS+DG+ A
Sbjct: 91 RGN--------ESDPRERTPLPFRLLANPAYEPVAEEGPSGTLRRVPFFEGCLSIDGWHA 142
Query: 514 VVERYLDVEVTGLDSNGAPI 573
+V R+ V +TG D++GAPI
Sbjct: 143 LVARHHRVRLTGQDADGAPI 162
[112][TOP]
>UniRef100_UPI000197675C peptide deformylase n=1 Tax=Bifidobacterium bifidum NCIMB 41171
RepID=UPI000197675C
Length = 217
Score = 82.0 bits (201), Expect = 3e-14
Identities = 47/130 (36%), Positives = 71/130 (54%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+AG+PVL + + ++ + K+ID M M +APGVGLAA QIG+ + V+ED
Sbjct: 32 VQAGEPVLRQQTVQYS-GQLSKGTLNKLIDTMHTTMLEAPGVGLAATQIGLGLALAVVED 90
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
+ +E ++ F I+NP + + T F+EGCLS DG++AV R+LD
Sbjct: 91 ------HVRDDEDDPREIAEFPFHAIINPSYEPIGDATRSFYEGCLSFDGYQAVRRRWLD 144
Query: 535 VEVTGLDSNG 564
+ D NG
Sbjct: 145 ITARWTDENG 154
[113][TOP]
>UniRef100_Q5FUM9 Peptide deformylase n=1 Tax=Gluconobacter oxydans
RepID=Q5FUM9_GLUOX
Length = 170
Score = 82.0 bits (201), Expect = 3e-14
Identities = 50/140 (35%), Positives = 78/140 (55%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M L + G+PVLH+ AQ + S+ K+ ++Q +I DM+ M A G GLAAPQ+ P R
Sbjct: 1 MPLLKIARMGNPVLHQVAQAV--SDPKAPEIQSLIADMLETMADARGAGLAAPQVHQPLR 58
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
I V ++ P+E + + V++NP++ ++ + EGCLS+ G RA
Sbjct: 59 IFVYHVPTNRVAN-PEEALLPR--------VLINPEITPVGDEMMVCSEGCLSIPGLRAD 109
Query: 517 VERYLDVEVTGLDSNGAPIK 576
V R+ V +GLD NGA ++
Sbjct: 110 VPRHAKVRYSGLDENGAVLE 129
[114][TOP]
>UniRef100_C7R169 Peptide deformylase n=1 Tax=Jonesia denitrificans DSM 20603
RepID=C7R169_JONDD
Length = 245
Score = 82.0 bits (201), Expect = 3e-14
Identities = 51/133 (38%), Positives = 67/133 (50%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V AG PVL A + ID M M APGVGLAAPQ+G+ + V+ D
Sbjct: 53 VHAGHPVLRREAGRYEGQ--LGADFMAFIDAMNTTMVVAPGVGLAAPQVGVSLAVAVMRD 110
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
P+E + F + V+VNP + ++ FFEGCLSV G++AVV R+
Sbjct: 111 PGAADDADPRERVA------FPMRVLVNPVYEPVGDEKVSFFEGCLSVPGYQAVVARWRR 164
Query: 535 VEVTGLDSNGAPI 573
V V G D GAP+
Sbjct: 165 VRVMGWDETGAPV 177
[115][TOP]
>UniRef100_A8TUC7 Peptide deformylase n=1 Tax=alpha proteobacterium BAL199
RepID=A8TUC7_9PROT
Length = 175
Score = 82.0 bits (201), Expect = 3e-14
Identities = 49/132 (37%), Positives = 77/132 (58%)
Frame = +1
Query: 181 AGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTK 360
A DPVL + +D + ++V+++IDDM + M APGVGLAAPQ+G+ R+IV+
Sbjct: 9 APDPVLKTKCRSVD---VVDDEVRRLIDDMFQTMYFAPGVGLAAPQVGVTKRVIVV---- 61
Query: 361 EYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVE 540
++ +D +P + +VNP++ +S+ T ++ EGCLS+ A VER V+
Sbjct: 62 ---------DVAGKDEKP-QPIALVNPEIVWRSDATQIYEEGCLSLPELYADVERASHVK 111
Query: 541 VTGLDSNGAPIK 576
V LD +GA K
Sbjct: 112 VRYLDRDGAEQK 123
[116][TOP]
>UniRef100_C5C017 Peptide deformylase n=1 Tax=Beutenbergia cavernae DSM 12333
RepID=C5C017_BEUC1
Length = 217
Score = 81.6 bits (200), Expect = 4e-14
Identities = 51/130 (39%), Positives = 68/130 (52%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V AG PVL PA E+ +E+ ++++ M MR APGVGLAAPQIG+P I V+ED
Sbjct: 22 VSAGAPVLRAPAARYG-GELGAERFHRLLEAMRVTMRTAPGVGLAAPQIGLPLAIAVIED 80
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
A++R P V+VNP + F+EGCLSV G+ AV R+
Sbjct: 81 P----GVDDDATAAARERVPVAFRVLVNPTYTPAGPERVSFYEGCLSVPGYVAVRARWRR 136
Query: 535 VEVTGLDSNG 564
V + D G
Sbjct: 137 VRLLAADEAG 146
[117][TOP]
>UniRef100_A4SYX7 Peptide deformylase n=1 Tax=Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1 RepID=A4SYX7_POLSQ
Length = 181
Score = 81.6 bits (200), Expect = 4e-14
Identities = 46/139 (33%), Positives = 72/139 (51%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + ++ GDP L E A+ +DP I S+++Q +IDD++ M G GLAAPQIG+ +
Sbjct: 1 MAIQSILRMGDPRLLEIAKPVDPKLISSQQIQTLIDDLLETMYAVNGAGLAAPQIGVNQQ 60
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V + + + D +++NP + S+ + +EGCLSV G RA
Sbjct: 61 VVV---------FGFDQNPRYPDAEQVPETILINPIITPLSDISMEDWEGCLSVPGLRAK 111
Query: 517 VERYLDVEVTGLDSNGAPI 573
V RY + G D G I
Sbjct: 112 VPRYTKIRYQGFDRYGQSI 130
[118][TOP]
>UniRef100_A6U5I4 Peptide deformylase n=1 Tax=Sinorhizobium medicae WSM419
RepID=A6U5I4_SINMW
Length = 174
Score = 80.9 bits (198), Expect = 7e-14
Identities = 47/136 (34%), Positives = 75/136 (55%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + DPVL + + P E ++++ DDM+ M APG+GLAA QIG+P R
Sbjct: 1 MTIKPLIILPDPVLRQVST---PVETVDADIRRLADDMLETMYDAPGIGLAAIQIGVPKR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++VL+ TKE ++++P LV +NPK+ S + +++ EGCLS+ + A
Sbjct: 58 LLVLDVTKE-----------GEEKQP---LVFINPKVVRSSEERSVYEEGCLSIPDYYAE 103
Query: 517 VERYLDVEVTGLDSNG 564
VER + V +D G
Sbjct: 104 VERPAAITVEYVDREG 119
[119][TOP]
>UniRef100_A8TJ97 Peptide deformylase n=1 Tax=alpha proteobacterium BAL199
RepID=A8TJ97_9PROT
Length = 183
Score = 80.9 bits (198), Expect = 7e-14
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEI-DPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPS 333
M V+ GDPVL A + DP+ + ++++IDDM+ + +A G+GLAAPQIGI
Sbjct: 1 MTSKSIVRVGDPVLRSVAALVPDPT---APAIRQLIDDMVASLEEAGGIGLAAPQIGILQ 57
Query: 334 RIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRA 513
R+++ + P D P L ++NP L+ ++ AL +EGCLS+ G R
Sbjct: 58 RVLIFWVPDARATNEP-------DDGPCPLTALINPVLEPLDDRMALGWEGCLSIPGLRG 110
Query: 514 VVERYLDVEVTGLDSNGAPIK 576
V R+L + VT G P +
Sbjct: 111 EVPRHLRMRVTATTPEGEPFE 131
[120][TOP]
>UniRef100_A6G3Q1 Peptide deformylase n=1 Tax=Plesiocystis pacifica SIR-1
RepID=A6G3Q1_9DELT
Length = 192
Score = 80.9 bits (198), Expect = 7e-14
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
+ G PVL + A+E+ P E+ + ++Q IDD++ MR A G GLAA Q+ P +I L
Sbjct: 9 RVGAPVLRQVAREVSPEELATPEIQGFIDDLVATMRHANGAGLAANQVFEPIQICAL--- 65
Query: 358 KEYISYAPKEEIKAQDRRPF----DLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVER 525
E+++ R P+ L V+VNPKL + + +EGCLSV R VV R
Sbjct: 66 ----------EVQSNPRYPYKPNIPLTVLVNPKLTPLGDDSFANYEGCLSVPDLRGVVRR 115
Query: 526 YLDVEVTGLDSNG 564
+ + V LD G
Sbjct: 116 HARLRVQALDREG 128
[121][TOP]
>UniRef100_C2CX45 Peptide deformylase n=1 Tax=Gardnerella vaginalis ATCC 14019
RepID=C2CX45_GARVA
Length = 217
Score = 80.5 bits (197), Expect = 9e-14
Identities = 51/143 (35%), Positives = 77/143 (53%)
Frame = +1
Query: 136 LTDNKKKMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAP 315
L D+ + V+AG+PVL + D ++ + K+I M M APGVGLAAP
Sbjct: 19 LLDSATDDGVLSIVQAGEPVLRQRTVAYD-GQLTRATLNKLISLMHSTMLDAPGVGLAAP 77
Query: 316 QIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLS 495
QIG+ I V+ED + P++ + R I+NP + +T F+EGCLS
Sbjct: 78 QIGLGLAIAVVEDHVRDDADDPRDIAELPFR------AIINPHYEPIGTQTRSFYEGCLS 131
Query: 496 VDGFRAVVERYLDVEVTGLDSNG 564
V G++AV +R+LD++ T D +G
Sbjct: 132 VAGYQAVRQRWLDIQATWQDEDG 154
[122][TOP]
>UniRef100_B1S579 Peptide deformylase n=1 Tax=Bifidobacterium dentium ATCC 27678
RepID=B1S579_9BIFI
Length = 242
Score = 80.5 bits (197), Expect = 9e-14
Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
Frame = +1
Query: 154 KMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPS 333
K L V+AG+PVL + + ++ + + K+ID M M +APGVGLAA QIG+
Sbjct: 49 KDKLLPIVQAGEPVLRQQTAAYE-GQLSRKTLDKLIDTMHVTMLEAPGVGLAATQIGLGL 107
Query: 334 RIIVLED-TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFR 510
+ V+ED ++ P+E + F VI+NP + +T F+EGCLS DG++
Sbjct: 108 ALAVVEDHVRDGDDGDPREAAE------FPFHVIINPSYEPIGTQTRSFYEGCLSFDGYQ 161
Query: 511 AVVERYLDVEVTGLDSNG 564
AV +R+LD+ D +G
Sbjct: 162 AVRKRWLDITARWQDEDG 179
[123][TOP]
>UniRef100_Q92SH6 Peptide deformylase n=1 Tax=Sinorhizobium meliloti RepID=DEF_RHIME
Length = 174
Score = 80.5 bits (197), Expect = 9e-14
Identities = 47/136 (34%), Positives = 75/136 (55%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + DPVL + + P E ++++ DDM+ M APG+GLAA QIG+P R
Sbjct: 1 MTIKPLIILPDPVLRQVST---PVETIDADIRRLADDMLETMYDAPGIGLAAIQIGVPKR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++VL+ TKE ++++P LV +NPK+ S + +++ EGCLS+ + A
Sbjct: 58 LLVLDVTKE-----------GEEKQP---LVFINPKVVRSSEERSVYEEGCLSIPDYYAE 103
Query: 517 VERYLDVEVTGLDSNG 564
VER + V +D G
Sbjct: 104 VERPAAITVEYVDREG 119
[124][TOP]
>UniRef100_A1A2Z1 Peptide deformylase n=2 Tax=Bifidobacterium adolescentis
RepID=DEF_BIFAA
Length = 218
Score = 80.5 bits (197), Expect = 9e-14
Identities = 47/137 (34%), Positives = 74/137 (54%)
Frame = +1
Query: 154 KMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPS 333
K + V+AG+PVL + D ++ + + K+ID M M +APGVGLAA QIG+
Sbjct: 25 KEKIMPIVQAGEPVLRQQTIAYD-GQLSRKTLDKLIDTMRTTMLEAPGVGLAATQIGLGL 83
Query: 334 RIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRA 513
+ V+ED ++ ++ F I+NP + +T F+EGCLS DG++A
Sbjct: 84 ALAVVED-----HVCEGDDGDPREAAEFPFHAIINPSYEPIGTETRSFYEGCLSFDGYQA 138
Query: 514 VVERYLDVEVTGLDSNG 564
V +R+LD+ D +G
Sbjct: 139 VRKRWLDITARWQDEDG 155
[125][TOP]
>UniRef100_B9JQX2 Peptide deformylase n=1 Tax=Agrobacterium vitis S4
RepID=B9JQX2_AGRVS
Length = 176
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/126 (37%), Positives = 72/126 (57%)
Frame = +1
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEY 366
DP+L E +Q P E ++++IDDM+ M APG+GLAA QI +P R++V++ +KE
Sbjct: 15 DPLLREVSQ---PIERIDADLERLIDDMLETMYDAPGIGLAAVQIAVPRRLLVIDVSKE- 70
Query: 367 ISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVT 546
+D++P LV +NP++ S + + EGCLS+ + A VER V V
Sbjct: 71 ----------GEDKQP---LVFINPEIIGSSQARSTYEEGCLSIPDYYAEVERPAAVTVK 117
Query: 547 GLDSNG 564
LD +G
Sbjct: 118 SLDRHG 123
[126][TOP]
>UniRef100_A9WSG2 Peptide deformylase n=1 Tax=Renibacterium salmoninarum ATCC 33209
RepID=A9WSG2_RENSM
Length = 213
Score = 80.1 bits (196), Expect = 1e-13
Identities = 44/129 (34%), Positives = 78/129 (60%)
Frame = +1
Query: 160 NLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRI 339
+LP+ V+AG P L PAQ + ++ + ++++ ++ M R M APG GLAAPQ+G+ ++
Sbjct: 24 SLPEIVQAGHPTLRAPAQPWN-GQLGASELEQFVELMRRCMHAAPGFGLAAPQLGVSLQL 82
Query: 340 IVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVV 519
VLED + S E ++R ++NP+ + ++ F+EGCLS+ G++AVV
Sbjct: 83 AVLEDGHQVDS----EIASIRERSNLPFFAMLNPRYQPLNSILVGFYEGCLSMSGWQAVV 138
Query: 520 ERYLDVEVT 546
R+ +++T
Sbjct: 139 YRHHAIQLT 147
[127][TOP]
>UniRef100_C4FE11 Peptide deformylase n=1 Tax=Bifidobacterium angulatum DSM 20098
RepID=C4FE11_9BIFI
Length = 217
Score = 80.1 bits (196), Expect = 1e-13
Identities = 52/137 (37%), Positives = 74/137 (54%)
Frame = +1
Query: 154 KMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPS 333
K ++ V+AG+PVL + ++ + K+ID M M +APGVGLAA QIG+
Sbjct: 25 KEHILPIVQAGEPVLRQQTVAYT-GQLSKHTLAKLIDAMRTTMLEAPGVGLAATQIGLGL 83
Query: 334 RIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRA 513
+ VLED P+E PF VI+NP +T F+EGCLS DG++A
Sbjct: 84 ALAVLEDHIRDDEDDPREI----GELPFH--VIINPVYAPVGTETRSFYEGCLSFDGYQA 137
Query: 514 VVERYLDVEVTGLDSNG 564
V +R+LD++ D NG
Sbjct: 138 VRKRWLDIDAEWDDENG 154
[128][TOP]
>UniRef100_UPI0000E87B13 peptide deformylase n=1 Tax=Methylophilales bacterium HTCC2181
RepID=UPI0000E87B13
Length = 171
Score = 79.7 bits (195), Expect = 1e-13
Identities = 51/140 (36%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + D +K GDP+L AQ I+ + + ++ +II+DMI M+ G GLAAPQIG+ +
Sbjct: 1 MAIKDILKMGDPLLLSAAQPIEA--VNTPELNQIIEDMIETMKANDGAGLAAPQIGLSIQ 58
Query: 337 IIVLE-DTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRA 513
+++ D+ E Y EE+ PF V++NP++ + +EGCLSV G R
Sbjct: 59 LVIFGFDSNE--RYPDAEEV------PFT--VLINPEIIPLEEEMEDGWEGCLSVPGLRG 108
Query: 514 VVERYLDVEVTGLDSNGAPI 573
VV RY + G+D G I
Sbjct: 109 VVPRYKSIHYKGIDQFGQTI 128
[129][TOP]
>UniRef100_B5W5I1 Peptide deformylase n=1 Tax=Arthrospira maxima CS-328
RepID=B5W5I1_SPIMA
Length = 187
Score = 79.7 bits (195), Expect = 1e-13
Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Frame = +1
Query: 148 KKKMNLP--DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQI 321
K+K+ P D GD VL +PA+ + + +++++++ +M++ M A G+GLAAPQ+
Sbjct: 9 KQKLEKPPLDIHYLGDRVLRQPAKRVSRID---DEIRQLVREMLQTMYSADGIGLAAPQV 65
Query: 322 GIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVD 501
G+ ++IV++ + + P LV++NP +K S + + F EGCLS+
Sbjct: 66 GVHKQVIVIDCEPDNAATPP--------------LVLINPTIKKSSRELSPFQEGCLSIP 111
Query: 502 GFRAVVERYLDVEVTGLDSNGAP 570
G V R +VEVT D NG P
Sbjct: 112 GVYMDVVRPEEVEVTFKDENGRP 134
[130][TOP]
>UniRef100_UPI00019073D4 peptide deformylase n=1 Tax=Rhizobium etli GR56 RepID=UPI00019073D4
Length = 171
Score = 79.3 bits (194), Expect = 2e-13
Identities = 46/136 (33%), Positives = 77/136 (56%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + DP+L + +Q P E +Q++ DDM+ M APG+GLAA QIG+P R
Sbjct: 1 MTIKPLIILPDPILRQLSQ---PIERMDADLQRLADDMLETMYDAPGIGLAAIQIGVPRR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V++ ++E ++++P V +NP++ S++ +++ EGCLS+ + A
Sbjct: 58 MLVIDVSRE-----------GEEKQP---QVFINPEIVKSSDERSVYEEGCLSIPDYYAE 103
Query: 517 VERYLDVEVTGLDSNG 564
VER V V LD NG
Sbjct: 104 VERPAVVSVKYLDRNG 119
[131][TOP]
>UniRef100_Q1MM81 Peptide deformylase n=1 Tax=Rhizobium leguminosarum bv. viciae 3841
RepID=Q1MM81_RHIL3
Length = 171
Score = 79.3 bits (194), Expect = 2e-13
Identities = 47/136 (34%), Positives = 77/136 (56%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + DPVL + ++ P E +Q++ DDM+ M APG+GLAA QIG+P R
Sbjct: 1 MTIKPLIILPDPVLRQLSK---PIERVDSDLQRLADDMLETMYDAPGIGLAAIQIGVPRR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V++ ++E ++++P V +NP++ S++ +L+ EGCLS+ + A
Sbjct: 58 MLVIDISRE-----------GEEKQP---QVFINPEIVKSSDERSLYEEGCLSIPDYYAE 103
Query: 517 VERYLDVEVTGLDSNG 564
VER V V LD NG
Sbjct: 104 VERPAVVSVKYLDRNG 119
[132][TOP]
>UniRef100_C3MF24 Peptide deformylase n=1 Tax=Rhizobium sp. NGR234 RepID=C3MF24_RHISN
Length = 174
Score = 79.3 bits (194), Expect = 2e-13
Identities = 46/136 (33%), Positives = 75/136 (55%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + DP+L + + P E ++++ DDM+ M APG+GLAA QIG+P R
Sbjct: 1 MTIKPLIILPDPILRQVST---PVETIDADIRRLADDMLETMYDAPGIGLAAIQIGVPRR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++VL+ +KE +++ P LV +NPK+ S + +++ EGCLS+ + A
Sbjct: 58 LLVLDVSKE-----------GEEKTP---LVFINPKIVKSSEERSVYEEGCLSIPDYYAE 103
Query: 517 VERYLDVEVTGLDSNG 564
VER + V LD +G
Sbjct: 104 VERPAAIAVEYLDRDG 119
[133][TOP]
>UniRef100_A4G4R6 Peptide deformylase n=1 Tax=Herminiimonas arsenicoxydans
RepID=A4G4R6_HERAR
Length = 178
Score = 79.3 bits (194), Expect = 2e-13
Identities = 48/139 (34%), Positives = 71/139 (51%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + +K GDP L A+ + E + ++ +I DM M A G GLAAPQIG+ R
Sbjct: 1 MTVREILKMGDPRLLRVAEPV--KEFNTPELNALIADMFDTMHAAHGAGLAAPQIGVNLR 58
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
+++ Y K+ + D P V++NPKL+ S++ +EGCLSV G R V
Sbjct: 59 LVI---------YGFKQNTRYPDAPPVPETVLINPKLRPLSSEREEGWEGCLSVPGLRGV 109
Query: 517 VERYLDVEVTGLDSNGAPI 573
V R+ + G D G I
Sbjct: 110 VPRFSSLHYEGFDQFGKAI 128
[134][TOP]
>UniRef100_C1ZQV1 Peptide deformylase n=1 Tax=Rhodothermus marinus DSM 4252
RepID=C1ZQV1_RHOMR
Length = 189
Score = 79.3 bits (194), Expect = 2e-13
Identities = 49/130 (37%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDP+L E AQ P S ++Q+++DDM+ M A G+GLAAPQ+G R+ V++ T
Sbjct: 9 GDPILRERAQ---PVAADSPELQQLLDDMVETMHAASGIGLAAPQVGRRERVFVVDLT-- 63
Query: 364 YISYAPKEEIKAQ-DRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVE 540
KEE++A+ + P + +NP++ S + F EGCLS+ R VVER + V
Sbjct: 64 ----PMKEELEAEGETLPPMPMFFINPEIVWTSEEQCSFEEGCLSIPDVREVVERPVAVR 119
Query: 541 VTGLDSNGAP 570
+ LD P
Sbjct: 120 IRYLDRQFRP 129
[135][TOP]
>UniRef100_B6XVA5 Peptide deformylase n=1 Tax=Bifidobacterium catenulatum DSM 16992
RepID=B6XVA5_9BIFI
Length = 218
Score = 79.3 bits (194), Expect = 2e-13
Identities = 47/137 (34%), Positives = 75/137 (54%)
Frame = +1
Query: 154 KMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPS 333
K L V+AG+PVL + + ++ + + K+I+ M M +APGVGLAA QIG+
Sbjct: 25 KEQLLPIVQAGEPVLRQQTAAYE-GQLSRKTLDKLIETMRVTMIEAPGVGLAATQIGLGL 83
Query: 334 RIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRA 513
+ V+ED ++ ++ F VI+NP + +T F+EGCLS DG++A
Sbjct: 84 ALAVVED-----HVRDDDDDDPREAAEFPFHVIINPSYEPIGTETRSFYEGCLSFDGYQA 138
Query: 514 VVERYLDVEVTGLDSNG 564
V +R+LD+ D +G
Sbjct: 139 VRKRWLDITARWQDEDG 155
[136][TOP]
>UniRef100_UPI00019041AE peptide deformylase n=1 Tax=Rhizobium etli Kim 5
RepID=UPI00019041AE
Length = 171
Score = 79.0 bits (193), Expect = 3e-13
Identities = 46/136 (33%), Positives = 77/136 (56%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + DP+L + +Q P E +Q++ DDM+ M APG+GLAA QIG+P R
Sbjct: 1 MTIKPLIILPDPILRQLSQ---PIERVDADLQRLADDMLETMYDAPGIGLAAIQIGVPRR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V++ ++E ++++P V +NP++ S++ +++ EGCLS+ + A
Sbjct: 58 MLVIDVSRE-----------GEEKQP---QVFINPEIVKSSDERSVYEEGCLSIPDYYAE 103
Query: 517 VERYLDVEVTGLDSNG 564
VER V V LD NG
Sbjct: 104 VERPAVVSVKYLDRNG 119
[137][TOP]
>UniRef100_B1JCR4 Peptide deformylase n=1 Tax=Pseudomonas putida W619
RepID=B1JCR4_PSEPW
Length = 178
Score = 78.6 bits (192), Expect = 3e-13
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIV- 345
D +K GD L A + I S ++Q++IDDM MR GVGLAAPQ+GI ++++
Sbjct: 4 DILKMGDERLLRVAAPVPEHLIGSAELQQLIDDMFETMRHVGGVGLAAPQVGIDLQLVIF 63
Query: 346 -LEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVE 522
E ++ Y P E Q +++NP + S + +EGCLSV G R VV
Sbjct: 64 GFERSERY----PDAEAVPQ-------TILLNPVITPLSTEIEEGWEGCLSVPGLRGVVP 112
Query: 523 RYLDVEVTGLDSNGAPI 573
RY + G+D G P+
Sbjct: 113 RYKHISYEGIDPQGNPV 129
[138][TOP]
>UniRef100_C0BRY1 Peptide deformylase n=1 Tax=Bifidobacterium pseudocatenulatum DSM
20438 RepID=C0BRY1_9BIFI
Length = 218
Score = 78.6 bits (192), Expect = 3e-13
Identities = 47/137 (34%), Positives = 75/137 (54%)
Frame = +1
Query: 154 KMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPS 333
K L V+AG+PVL + + ++ + + K+I+ M M +APGVGLAA QIG+
Sbjct: 25 KEQLLPIVQAGEPVLRQQTAAYE-GQLSRKTLDKLIETMRVTMIEAPGVGLAATQIGLGL 83
Query: 334 RIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRA 513
+ V+ED ++ ++ F VI+NP + +T F+EGCLS DG++A
Sbjct: 84 ALAVVED-----HVRDDDDDDPREAAEFPFHVIINPSYEPIGTETRSFYEGCLSFDGYQA 138
Query: 514 VVERYLDVEVTGLDSNG 564
V +R+LD+ D +G
Sbjct: 139 VRKRWLDIIARWQDEDG 155
[139][TOP]
>UniRef100_Q04RW4 Peptide deformylase n=2 Tax=Leptospira borgpetersenii serovar
Hardjo-bovis RepID=DEF_LEPBJ
Length = 178
Score = 78.6 bits (192), Expect = 3e-13
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M++ ++ GD +L + + + +E+++++ +K+I DM MR A GVGLAAPQIGI +
Sbjct: 1 MSVRKILRMGDSILRQVSIPVTENELQTKEFKKLIRDMFDTMRHAEGVGLAAPQIGILKQ 60
Query: 337 IIVL--EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFR 510
I+V+ ED + Y D VI+NP + + T+ F+EGCLSV G R
Sbjct: 61 IVVVGSEDNERY-----------PDTPNVPERVILNPIITPLTKDTSGFWEGCLSVPGMR 109
Query: 511 AVVERYLDVEVTGLDSNG 564
VER + + +D G
Sbjct: 110 GYVERPNKIRMQWMDEKG 127
[140][TOP]
>UniRef100_Q1V1L8 Peptide deformylase n=1 Tax=Candidatus Pelagibacter ubique HTCC1002
RepID=Q1V1L8_PELUB
Length = 172
Score = 78.2 bits (191), Expect = 4e-13
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Frame = +1
Query: 190 PVLHEP----AQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
P+L EP Q P E ++ ++++DDM+ M APG+GLAA QIG+P RIIV++ +
Sbjct: 5 PILTEPNKLLRQISKPVENVGDEERRLMDDMLDTMYAAPGIGLAAIQIGVPKRIIVMDIS 64
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
++ P+ VNP +KNK++ T+ + EGCLSV A +ER +
Sbjct: 65 RDEDKKEPR--------------YFVNPLIKNKNDITSKYEEGCLSVPDQFAEIERPNEC 110
Query: 538 EVTGLDSNG 564
EV LD NG
Sbjct: 111 EVEYLDYNG 119
[141][TOP]
>UniRef100_A3X5X3 Peptide deformylase n=1 Tax=Roseobacter sp. MED193
RepID=A3X5X3_9RHOB
Length = 172
Score = 78.2 bits (191), Expect = 4e-13
Identities = 46/109 (42%), Positives = 66/109 (60%)
Frame = +1
Query: 238 SEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPF 417
S+K++ + DDM+ M APG+GLAAPQIG+ R+IVL+ KE + + +P
Sbjct: 24 SDKLRLLADDMLETMYAAPGIGLAAPQIGVMERLIVLDCEKE----------EGVEPKP- 72
Query: 418 DLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
LV+ NP++ + S +T ++ EGCLS+ A V R DVEV LD NG
Sbjct: 73 --LVMFNPEIISSSEETNVYEEGCLSIPDQYAEVTRPRDVEVQWLDRNG 119
[142][TOP]
>UniRef100_A9HS47 Peptide deformylase n=1 Tax=Gluconacetobacter diazotrophicus PAl 5
RepID=A9HS47_GLUDA
Length = 176
Score = 77.8 bits (190), Expect = 6e-13
Identities = 49/141 (34%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEI-DPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPS 333
M L + G PVL A E+ DP+ + + ++IDDMI M A G GLAAPQ+ +
Sbjct: 1 MTLLKIARMGHPVLLRRADEVADPT---APDIARLIDDMIETMEDARGAGLAAPQVHVSL 57
Query: 334 RIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRA 513
R+ V P E D P + V++NP L ++ AL EGCLS+ G R
Sbjct: 58 RLFVYR--------VPAERSAGGDDPPRETSVLINPVLSLVDDEMALRPEGCLSIPGLRG 109
Query: 514 VVERYLDVEVTGLDSNGAPIK 576
+V R++ + +GLD G ++
Sbjct: 110 MVPRHVRIAYSGLDRAGQAVQ 130
[143][TOP]
>UniRef100_D0CVE9 Peptide deformylase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157
RepID=D0CVE9_9RHOB
Length = 172
Score = 77.8 bits (190), Expect = 6e-13
Identities = 45/114 (39%), Positives = 69/114 (60%)
Frame = +1
Query: 223 PSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQ 402
P + S++++ + DDM+ M APG+GLAAPQIG+ R+IVL+ KE +
Sbjct: 19 PVDDLSDELRALADDMLETMYDAPGIGLAAPQIGVLERLIVLDCVKE----------EGA 68
Query: 403 DRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
RP LV+ NP++ + S++T+++ EGCLS+ A V R +VEV +D NG
Sbjct: 69 TPRP---LVMFNPEIISASDETSVYEEGCLSIPDQFAEVTRPAEVEVAWMDQNG 119
[144][TOP]
>UniRef100_B5VW89 Peptide deformylase n=1 Tax=Arthrospira maxima CS-328
RepID=B5VW89_SPIMA
Length = 177
Score = 77.8 bits (190), Expect = 6e-13
Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL + AQ + + I ++Q +IDD++ + + GVG+AAPQ+G RI+V+ ++
Sbjct: 11 GDPVLRDHAQPV--ANIWEARIQSLIDDLMATVIEKNGVGIAAPQVGYSDRILVIA-SRP 67
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY--LDV 537
I Y E++ ++NPK+ KS + +EGCLSV G R +V RY ++V
Sbjct: 68 SIRYPAAPEMEPT--------AMINPKIIGKSEEMVADWEGCLSVPGIRGIVNRYQAIEV 119
Query: 538 EVTGLDSN 561
E T D +
Sbjct: 120 EYTSRDGH 127
[145][TOP]
>UniRef100_C6AZ57 Peptide deformylase n=1 Tax=Rhizobium leguminosarum bv. trifolii
WSM1325 RepID=C6AZ57_RHILS
Length = 171
Score = 77.4 bits (189), Expect = 7e-13
Identities = 46/136 (33%), Positives = 76/136 (55%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + DPVL + ++ P E +Q++ DDM+ M APG+GLAA QIG+P R
Sbjct: 1 MTIKPLIILPDPVLRQLSK---PIERVDSDLQRLADDMLETMYDAPGIGLAAIQIGVPRR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V++ +E ++++P V +NP++ S++ +++ EGCLS+ + A
Sbjct: 58 MLVIDIARE-----------GEEKQP---QVFINPEVVKSSDERSVYEEGCLSIPDYYAE 103
Query: 517 VERYLDVEVTGLDSNG 564
VER V V LD NG
Sbjct: 104 VERPAVVSVKYLDRNG 119
[146][TOP]
>UniRef100_A9AIL0 Peptide deformylase n=1 Tax=Burkholderia multivorans ATCC 17616
RepID=A9AIL0_BURM1
Length = 177
Score = 77.4 bits (189), Expect = 7e-13
Identities = 50/135 (37%), Positives = 68/135 (50%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GDP L E A+ +D + ++ +I+ DM M A G GLAAPQIGI +II+
Sbjct: 4 EILKMGDPRLLEVARPVD--RFDTPELHEIVADMFETMHHANGAGLAAPQIGIGLQIII- 60
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + D P V++NPKL+ +EGCLSV G R VV RY
Sbjct: 61 --------FGFGSNDRYPDAPPVPETVLINPKLEYMPPDMEEGWEGCLSVPGMRGVVSRY 112
Query: 529 LDVEVTGLDSNGAPI 573
V +G D GA I
Sbjct: 113 AKVRYSGFDQFGAKI 127
[147][TOP]
>UniRef100_A6SZQ6 Peptide deformylase n=1 Tax=Janthinobacterium sp. Marseille
RepID=A6SZQ6_JANMA
Length = 178
Score = 77.4 bits (189), Expect = 7e-13
Identities = 47/136 (34%), Positives = 70/136 (51%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + +K GDP L A+ + E + ++ +I+DM M A G GLAAPQIG+ R
Sbjct: 1 MTVREILKMGDPRLLRVAEPV--KEFGTPELDALIEDMFDTMHAANGAGLAAPQIGVNLR 58
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
+++ Y K+ + D P V++NPKL+ S + +EGCLSV G R V
Sbjct: 59 LVI---------YGFKQNTRYPDAPPVPETVLINPKLRPLSAEMEDGWEGCLSVPGLRGV 109
Query: 517 VERYLDVEVTGLDSNG 564
V R+ + G D G
Sbjct: 110 VPRFSALHYDGFDQYG 125
[148][TOP]
>UniRef100_B9BFQ1 Peptide deformylase n=1 Tax=Burkholderia multivorans CGD1
RepID=B9BFQ1_9BURK
Length = 177
Score = 77.4 bits (189), Expect = 7e-13
Identities = 50/135 (37%), Positives = 68/135 (50%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GDP L E A+ +D + ++ +I+ DM M A G GLAAPQIGI +II+
Sbjct: 4 EILKMGDPRLLEVARPVD--RFDTPELHEIVADMFETMHHANGAGLAAPQIGIGLQIII- 60
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + D P V++NPKL+ +EGCLSV G R VV RY
Sbjct: 61 --------FGFGSNNRYPDAPPVPETVLINPKLEYMPPDMEEGWEGCLSVPGMRGVVSRY 112
Query: 529 LDVEVTGLDSNGAPI 573
V +G D GA I
Sbjct: 113 AKVRYSGFDQFGAKI 127
[149][TOP]
>UniRef100_Q1I6N3 Peptide deformylase n=1 Tax=Pseudomonas entomophila L48
RepID=Q1I6N3_PSEE4
Length = 178
Score = 77.0 bits (188), Expect = 1e-12
Identities = 45/135 (33%), Positives = 69/135 (51%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
D +K GD L A + + S +++++IDDM M GVGLAAPQIGI ++++
Sbjct: 4 DILKMGDERLLRIAPPVPEHMLGSAELRQLIDDMFETMAHVGGVGLAAPQIGIDLQLVI- 62
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + + D +++NP + S + +EGCLSV G R VV RY
Sbjct: 63 --------FGFERSERYPDAEAVPRTILLNPVITPMSTEVEDGWEGCLSVPGLRGVVPRY 114
Query: 529 LDVEVTGLDSNGAPI 573
+ TG+D +G PI
Sbjct: 115 KHISYTGVDPDGNPI 129
[150][TOP]
>UniRef100_C6BVK1 Peptide deformylase n=1 Tax=Desulfovibrio salexigens DSM 2638
RepID=C6BVK1_DESAD
Length = 170
Score = 77.0 bits (188), Expect = 1e-12
Identities = 43/111 (38%), Positives = 66/111 (59%)
Frame = +1
Query: 244 KVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDL 423
++++IID+MI M + GVGLAAPQ+G+ R+IV++ + PKE DL
Sbjct: 26 ELKEIIDNMIETMYEDDGVGLAAPQVGVQKRLIVIDPS------GPKERT--------DL 71
Query: 424 LVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPIK 576
VI+NP++ KS++ E CLS GF+ V++R+ V VTG D G ++
Sbjct: 72 QVIINPEIVEKSSQKVDSEEACLSCPGFKCVIKRHETVTVTGTDPEGNDVR 122
[151][TOP]
>UniRef100_C3WIT6 Peptide deformylase n=1 Tax=Fusobacterium sp. 2_1_31
RepID=C3WIT6_9FUSO
Length = 174
Score = 77.0 bits (188), Expect = 1e-12
Identities = 48/133 (36%), Positives = 69/133 (51%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
K GD VL + A+E++ SEI E +K +DDM+ M K G+GLAAPQ+G+ R+ V ED
Sbjct: 7 KYGDDVLKQIAKEVELSEINDE-FRKFLDDMVETMYKTDGIGLAAPQVGVSKRVFVCEDG 65
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
I ++NP ++ + +T F EGCLSV G VER V
Sbjct: 66 TGKIR------------------KLINPVIEPLTEETQEFEEGCLSVPGIYKKVERPKKV 107
Query: 538 EVTGLDSNGAPIK 576
+ L+ NG ++
Sbjct: 108 MLKYLNENGEAVE 120
[152][TOP]
>UniRef100_Q88EA7 Peptide deformylase 2 n=1 Tax=Pseudomonas putida KT2440
RepID=DEF2_PSEPK
Length = 178
Score = 77.0 bits (188), Expect = 1e-12
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 2/137 (1%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIV- 345
D +K GD L A + + S ++Q++IDDM MR GVGLAAPQ+GI ++++
Sbjct: 4 DILKMGDERLLRIAPPVPEHMLGSAELQQLIDDMFETMRHVGGVGLAAPQVGIDLQLVIF 63
Query: 346 -LEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVE 522
E ++ Y P E Q +++NP + S++ +EGCLSV G R VV
Sbjct: 64 GFERSERY----PDAEAVPQ-------TILLNPVITPTSSEVEDGWEGCLSVPGLRGVVP 112
Query: 523 RYLDVEVTGLDSNGAPI 573
R+ + G+D G+PI
Sbjct: 113 RFKHICYQGIDPQGSPI 129
[153][TOP]
>UniRef100_UPI0001903290 peptide deformylase n=1 Tax=Rhizobium etli 8C-3 RepID=UPI0001903290
Length = 171
Score = 76.6 bits (187), Expect = 1e-12
Identities = 45/136 (33%), Positives = 77/136 (56%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + DP L + ++ P E ++Q++ DDM+ M APG+GLAA QIG+P R
Sbjct: 1 MTIKPLIILPDPFLRQLSK---PIERVDAELQRLADDMLETMYDAPGIGLAAIQIGVPRR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V++ ++E ++++P V +NP++ S++ +++ EGCLS+ + A
Sbjct: 58 MLVIDVSRE-----------GEEKQP---QVFINPEIVKSSDERSVYEEGCLSIPDYYAE 103
Query: 517 VERYLDVEVTGLDSNG 564
VER V V LD NG
Sbjct: 104 VERPAVVSVKYLDRNG 119
[154][TOP]
>UniRef100_B5ZN17 Peptide deformylase n=1 Tax=Rhizobium leguminosarum bv. trifolii
WSM2304 RepID=B5ZN17_RHILW
Length = 171
Score = 76.6 bits (187), Expect = 1e-12
Identities = 45/136 (33%), Positives = 76/136 (55%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + DP+L + ++ P E +Q + DDM+ M APG+GLAA QIG+P R
Sbjct: 1 MTIKPLIILPDPILRQASK---PIERVDADLQGLADDMLETMYDAPGIGLAAIQIGVPRR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V++ ++E ++++P V +NP++ S++ +++ EGCLS+ + A
Sbjct: 58 MLVIDVSRE-----------GEEKQP---QVFINPEIVKSSDERSVYEEGCLSIPDYYAE 103
Query: 517 VERYLDVEVTGLDSNG 564
VER V V LD NG
Sbjct: 104 VERPAVVSVKFLDRNG 119
[155][TOP]
>UniRef100_B3PZF4 Peptide deformylase n=1 Tax=Rhizobium etli CIAT 652
RepID=B3PZF4_RHIE6
Length = 171
Score = 76.6 bits (187), Expect = 1e-12
Identities = 45/136 (33%), Positives = 77/136 (56%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + DP+L + ++ P E +Q++ DDM+ M APG+GLAA QIG+P R
Sbjct: 1 MTIKPLIILPDPLLRQLSK---PIERVDADLQRLADDMLETMYDAPGIGLAAIQIGVPRR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V++ ++E ++++P V +NP++ S++ +++ EGCLS+ + A
Sbjct: 58 MLVIDVSRE-----------GEEKQP---QVFINPEIVKSSDERSVYEEGCLSIPDYYAE 103
Query: 517 VERYLDVEVTGLDSNG 564
VER V V LD NG
Sbjct: 104 VERPAVVSVKYLDRNG 119
[156][TOP]
>UniRef100_B9BY30 Peptide deformylase n=2 Tax=Burkholderia multivorans
RepID=B9BY30_9BURK
Length = 177
Score = 76.6 bits (187), Expect = 1e-12
Identities = 50/135 (37%), Positives = 68/135 (50%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GDP L E A+ +D + ++ +I+ DM M A G GLAAPQIGI +II+
Sbjct: 4 EILKMGDPRLLEVARPVD--RFDTPELHEIVADMFETMHHANGAGLAAPQIGIGLQIII- 60
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + D P V++NPKL+ +EGCLSV G R VV RY
Sbjct: 61 --------FGFGSNNRYPDAPPVPETVLINPKLEYMPPDMEEGWEGCLSVPGMRGVVSRY 112
Query: 529 LDVEVTGLDSNGAPI 573
V +G D GA I
Sbjct: 113 AKVRYSGSDQFGAKI 127
[157][TOP]
>UniRef100_A0NSA8 Peptide deformylase n=1 Tax=Labrenzia aggregata IAM 12614
RepID=A0NSA8_9RHOB
Length = 202
Score = 76.6 bits (187), Expect = 1e-12
Identities = 50/139 (35%), Positives = 73/139 (52%)
Frame = +1
Query: 151 KKMNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIP 330
++M + + DPVL E P + V+K+ DDM+ M APG+GLAA QIG+
Sbjct: 29 RQMTIRPIITIPDPVLREVCA---PVATVDDDVRKLADDMLETMYDAPGIGLAASQIGLL 85
Query: 331 SRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFR 510
RI VL+ K+ APKE +V +NPK+ S+ +++ EGCLS+ +
Sbjct: 86 QRIFVLDVAKD---DAPKEP-----------MVFINPKIVWSSDDLSVYQEGCLSIPDYY 131
Query: 511 AVVERYLDVEVTGLDSNGA 567
VER +V V L+ GA
Sbjct: 132 EEVERPAEVTVQFLNREGA 150
[158][TOP]
>UniRef100_Q02IU1 Peptide deformylase n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14
RepID=Q02IU1_PSEAB
Length = 179
Score = 76.3 bits (186), Expect = 2e-12
Identities = 43/135 (31%), Positives = 69/135 (51%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GD L AQ + + SE++Q++IDDM M GVGLAAPQIG+ ++++
Sbjct: 4 EILKMGDERLLRIAQPVPSELLGSEELQRLIDDMFETMHHVGGVGLAAPQIGVDLQLVI- 62
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + + D +++NP++ ++ +EGCLSV G R V R+
Sbjct: 63 --------FGFERSERYPDAPAVPPTILLNPRITPLDDEMEEGWEGCLSVPGLRGAVSRH 114
Query: 529 LDVEVTGLDSNGAPI 573
+ GLD G PI
Sbjct: 115 RRIRYQGLDPQGQPI 129
[159][TOP]
>UniRef100_A9I5H8 Peptide deformylase n=1 Tax=Bordetella petrii DSM 12804
RepID=A9I5H8_BORPD
Length = 177
Score = 76.3 bits (186), Expect = 2e-12
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL-- 348
+K GDP L AQ + + + ++ +++ DM M A GVGLAAPQIG+ ++++
Sbjct: 6 LKMGDPRLLRVAQPV--GQFDTPELHELVADMFETMVHAKGVGLAAPQIGVDLQLVIFGF 63
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
E + Y D P L V+ NP + +S++ +EGCLSV G R +V RY
Sbjct: 64 EHNERY-----------PDAPPVPLTVLCNPVITPRSDEREDGWEGCLSVPGLRGLVPRY 112
Query: 529 LDVEVTGLDSNGAPIK 576
+ G D +G PI+
Sbjct: 113 RHIRYRGFDPHGQPIE 128
[160][TOP]
>UniRef100_C5T5C2 Peptide deformylase n=1 Tax=Acidovorax delafieldii 2AN
RepID=C5T5C2_ACIDE
Length = 197
Score = 76.3 bits (186), Expect = 2e-12
Identities = 46/139 (33%), Positives = 71/139 (51%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + +K GDP L AQ + + + ++ ++I DM+ MR A G GLAAPQIG+ +
Sbjct: 19 MTIHSILKMGDPRLLRIAQPVQ--KFDTPELHQLIRDMLETMRAAQGAGLAAPQIGVDLQ 76
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
+++ + Y DR V+VNP + +EGCLSV G R
Sbjct: 77 VVIFGSNEPNRRYP--------DRPLVPPTVLVNPVITPLGEDEEEDWEGCLSVPGLRGK 128
Query: 517 VERYLDVEVTGLDSNGAPI 573
V R+L + +G D++G+PI
Sbjct: 129 VPRWLHIRYSGFDAHGSPI 147
[161][TOP]
>UniRef100_C2AWL4 Peptide deformylase n=1 Tax=Veillonella parvula DSM 2008
RepID=C2AWL4_9FIRM
Length = 162
Score = 76.3 bits (186), Expect = 2e-12
Identities = 49/139 (35%), Positives = 76/139 (54%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + D VKAG PVL + A+ P E ++K++ +IDDM M K GVGLAAPQ+ + R
Sbjct: 1 MAVLDVVKAGHPVLKQVAE---PVEHVNKKLRVLIDDMAETMYKTEGVGLAAPQVAVAKR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
IIV++ D+ L+ ++NP++ + + + + EGCLSV G+
Sbjct: 58 IIVVD-----------------DQSGSGLIALINPEITH-AEGSQVGPEGCLSVPGYFGD 99
Query: 517 VERYLDVEVTGLDSNGAPI 573
VER+ V V G+D + +
Sbjct: 100 VERFNKVTVKGIDPHNKKV 118
[162][TOP]
>UniRef100_B9GI48 Peptide deformylase (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9GI48_POPTR
Length = 258
Score = 76.3 bits (186), Expect = 2e-12
Identities = 46/131 (35%), Positives = 70/131 (53%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V+ DP+L + ID + + ++K++D+M VM K G+GL+APQ+GI +++V
Sbjct: 70 VEYPDPILRAKNKRIDSFD---DNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNP 126
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
E+ D +V+VNP++ S KT LF EGCLS G A V+R
Sbjct: 127 ADEH--------------GEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPES 172
Query: 535 VEVTGLDSNGA 567
V++ D NGA
Sbjct: 173 VKIDARDINGA 183
[163][TOP]
>UniRef100_B8HWZ8 Peptide deformylase n=1 Tax=Cyanothece sp. PCC 7425
RepID=B8HWZ8_CYAP4
Length = 190
Score = 75.9 bits (185), Expect = 2e-12
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRI-IV 345
D + G+PVL + AQ + E+ ++Q +IDD++ +++A GVGLAAPQ+G +I IV
Sbjct: 17 DITQLGNPVLRQTAQFVP--EVGHPQIQTLIDDLLVTVKQANGVGLAAPQVGASWQIFIV 74
Query: 346 LEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVER 525
+AP+ E A ++NP+L +++ +EGCLS+ G R +V R
Sbjct: 75 ASRPNPRYPHAPEMEPTA----------MINPRLLAHNDQQVKDWEGCLSIPGLRGLVPR 124
Query: 526 YLDVEVTGLDSNG 564
Y +EV LD G
Sbjct: 125 YQGIEVEYLDRRG 137
[164][TOP]
>UniRef100_A5W030 Peptide deformylase n=1 Tax=Pseudomonas putida F1
RepID=A5W030_PSEP1
Length = 178
Score = 75.9 bits (185), Expect = 2e-12
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIV- 345
D +K GD L A + S ++Q++IDDM MR GVGLAAPQIGI ++++
Sbjct: 4 DILKMGDERLLRIAPPVPEHMFGSAELQQLIDDMFETMRHVGGVGLAAPQIGIDLQLVIF 63
Query: 346 -LEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVE 522
E ++ Y P E Q +++NP + S++ +EGCLSV G R VV
Sbjct: 64 GFERSERY----PDAEAVPQ-------TILLNPVITPTSSEIEDGWEGCLSVPGLRGVVP 112
Query: 523 RYLDVEVTGLDSNGAPI 573
R+ + G+D G PI
Sbjct: 113 RFKHIGYQGIDPQGNPI 129
[165][TOP]
>UniRef100_D0D4H4 Peptide deformylase n=1 Tax=Citreicella sp. SE45 RepID=D0D4H4_9RHOB
Length = 176
Score = 75.9 bits (185), Expect = 2e-12
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Frame = +1
Query: 190 PVLHEPAQEI----DPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
P+L P + DP S+ ++ + DDM+ M APG+GLAAPQ+GI R+IVL+
Sbjct: 7 PILIHPDPRLKKLCDPVADLSDDLRTLADDMLETMYDAPGIGLAAPQVGILHRLIVLDCA 66
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
K+ P+ LV++NP++ S++ +++ EGCLS+ A VER V
Sbjct: 67 KQDNGETPRP------------LVMINPRILASSDERSVYEEGCLSIPDQYADVERPKMV 114
Query: 538 EVTGLDSNG 564
EV LD +G
Sbjct: 115 EVEWLDRDG 123
[166][TOP]
>UniRef100_C6J2B5 Peptide deformylase n=1 Tax=Paenibacillus sp. oral taxon 786 str.
D14 RepID=C6J2B5_9BACL
Length = 160
Score = 75.9 bits (185), Expect = 2e-12
Identities = 49/130 (37%), Positives = 70/130 (53%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
VK D VLH+ A+E+ + +QK++ DM M A GVGLAAPQIGI R+IV++
Sbjct: 7 VKEPDEVLHQVAKEVKKI---TPNIQKLLTDMADTMYDAEGVGLAAPQIGILKRVIVVDV 63
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
E+ L+ ++NP++ +K + EGCLS+ G+R V R +
Sbjct: 64 GDEH-----------------GLIELINPEIVSKEGE-QFGPEGCLSIPGYRGDVRRAMT 105
Query: 535 VEVTGLDSNG 564
V V GLD NG
Sbjct: 106 VTVKGLDRNG 115
[167][TOP]
>UniRef100_B1YSH1 Peptide deformylase n=3 Tax=Burkholderia ambifaria
RepID=B1YSH1_BURA4
Length = 177
Score = 75.9 bits (185), Expect = 2e-12
Identities = 49/135 (36%), Positives = 69/135 (51%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GDP L E A+ + ++ + ++ +I+ DM M A G GLAAPQIGI +II+
Sbjct: 4 EILKMGDPRLLEVAKPV--AQFDTPELHEIVADMFETMHHANGAGLAAPQIGIGLQIII- 60
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + D P V++NPKL+ +EGCLSV G R VV RY
Sbjct: 61 --------FGFGSNNRYPDAPPVPETVLINPKLEYMPPDMEEGWEGCLSVPGMRGVVSRY 112
Query: 529 LDVEVTGLDSNGAPI 573
V +G D GA I
Sbjct: 113 AKVRYSGYDQFGAKI 127
[168][TOP]
>UniRef100_B3CTU1 Peptide deformylase n=1 Tax=Orientia tsutsugamushi str. Ikeda
RepID=DEF_ORITI
Length = 181
Score = 75.9 bits (185), Expect = 2e-12
Identities = 49/133 (36%), Positives = 76/133 (57%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M++ + A DP+L + A +D ++ +++++DDM+ M GVGLAAPQ+ + R
Sbjct: 1 MSILSLITAPDPILKKVASPVDTV---NDSIRQLMDDMLETMYHNHGVGLAAPQVAVSKR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
IIVL+ +K I KE+ + L +VNP +K SN+TA EGCLS+
Sbjct: 58 IIVLDLSKVDI----KEDNITNSEYKYPLF-MVNPIVKAISNQTATAKEGCLSLPKQAIE 112
Query: 517 VERYLDVEVTGLD 555
V RY +++VT LD
Sbjct: 113 VSRYHEIQVTYLD 125
[169][TOP]
>UniRef100_Q6MJL6 Peptide deformylase n=1 Tax=Bdellovibrio bacteriovorus
RepID=Q6MJL6_BDEBA
Length = 201
Score = 75.5 bits (184), Expect = 3e-12
Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 5/131 (3%)
Frame = +1
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL-----E 351
DP L E +Q P + ++ K+ +DM+ M A G+GLAAPQ+G R++V+ +
Sbjct: 10 DPKLREVSQ---PVKTFGPEIAKLAEDMVETMYHANGIGLAAPQVGELVRMVVIDTRPKD 66
Query: 352 DTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYL 531
+ Y E++A ++P L+++NP++ KT F EGCLS+ G+ VERY
Sbjct: 67 EKGRRYKYEEMTELEAAVKQP---LILINPEIVKGEGKTT-FDEGCLSIPGYYETVERYN 122
Query: 532 DVEVTGLDSNG 564
+E+ D NG
Sbjct: 123 YIEMKAFDVNG 133
[170][TOP]
>UniRef100_Q2KD52 Peptide deformylase n=1 Tax=Rhizobium etli CFN 42
RepID=Q2KD52_RHIEC
Length = 171
Score = 75.5 bits (184), Expect = 3e-12
Identities = 45/136 (33%), Positives = 75/136 (55%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + DPVL + ++ P E +Q++ DDM+ M APG+GLAA QIG+P R
Sbjct: 1 MTIKPLIILPDPVLRQLSK---PIERVDADLQRLADDMLETMYDAPGIGLAAIQIGVPRR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V++ ++E ++++P V +NP++ S+ +++ EGCLS+ + A
Sbjct: 58 MLVIDVSRE-----------GEEKQP---QVFINPEIVKSSDDRSVYEEGCLSIPDYYAE 103
Query: 517 VERYLDVEVTGLDSNG 564
VER V V LD G
Sbjct: 104 VERPATVSVKYLDREG 119
[171][TOP]
>UniRef100_A4AVE2 Peptide deformylase n=1 Tax=Flavobacteriales bacterium HTCC2170
RepID=A4AVE2_9FLAO
Length = 196
Score = 75.5 bits (184), Expect = 3e-12
Identities = 45/131 (34%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V GDPVL + +EI+ + K+ ++I++M M A GVGLAAPQIG+P R+ +++
Sbjct: 6 VAYGDPVLRKVGKEIEKN---LPKLDELIENMWETMYNASGVGLAAPQIGLPVRLFLVDA 62
Query: 355 TKEYISYAPKEEIKAQDRRPFD--LLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
T +A +E+ ++R+ D V +N K++ ++ + +F EGCLS+ R V R
Sbjct: 63 T----PFAEDDELSEKERKDLDGFKKVFINAKMQEETGEDWVFNEGCLSIPEIREDVTRK 118
Query: 529 LDVEVTGLDSN 561
+ +T D N
Sbjct: 119 DTITITYFDEN 129
[172][TOP]
>UniRef100_B7UX65 Peptide deformylase n=2 Tax=Pseudomonas aeruginosa
RepID=B7UX65_PSEA8
Length = 179
Score = 75.5 bits (184), Expect = 3e-12
Identities = 43/135 (31%), Positives = 68/135 (50%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GD L AQ + SE++Q++IDDM M GVGLAAPQIG+ ++++
Sbjct: 4 EILKMGDERLLRIAQPVPSELFGSEELQRLIDDMFETMHHVGGVGLAAPQIGVDLQLVI- 62
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + + D +++NP++ ++ +EGCLSV G R V R+
Sbjct: 63 --------FGFERSERYPDAPAVPPTILLNPRITPLDDEMEEGWEGCLSVPGLRGAVSRH 114
Query: 529 LDVEVTGLDSNGAPI 573
+ GLD G PI
Sbjct: 115 RRIRYQGLDPQGQPI 129
[173][TOP]
>UniRef100_B5YIL7 Peptide deformylase n=1 Tax=Thermodesulfovibrio yellowstonii DSM
11347 RepID=DEF_THEYD
Length = 165
Score = 75.5 bits (184), Expect = 3e-12
Identities = 53/140 (37%), Positives = 82/140 (58%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + K D VL + A+ I SEI + +QK+ID+MI M A G+GLAAPQ+G+ R
Sbjct: 1 MAILEIKKYPDEVLKKKAETI--SEINGD-LQKLIDNMIETMYNANGIGLAAPQVGVLKR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
+IV++ +P+E+ ++ L+V++NP++ + S L EGCLS+ GF
Sbjct: 58 LIVVDT-------SPREQNQS-------LIVLINPEITD-SEGEILSEEGCLSLPGFTTR 102
Query: 517 VERYLDVEVTGLDSNGAPIK 576
++R V V GLD NG I+
Sbjct: 103 LKRKERVIVKGLDRNGKEIE 122
[174][TOP]
>UniRef100_Q4FNG1 Peptide deformylase n=1 Tax=Candidatus Pelagibacter ubique
RepID=DEF_PELUB
Length = 172
Score = 75.5 bits (184), Expect = 3e-12
Identities = 44/114 (38%), Positives = 66/114 (57%)
Frame = +1
Query: 223 PSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQ 402
P E ++ ++++DDM+ M APG+GLAA QIG+P RIIV++ +++ P+
Sbjct: 20 PVENVGDEERRLMDDMLDTMYAAPGIGLAAIQIGVPKRIIVMDISRDEDKKEPR------ 73
Query: 403 DRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
VNP +KNK++ T+ + EGCLSV A +ER + EV LD NG
Sbjct: 74 --------YFVNPVIKNKNDITSKYEEGCLSVPDQFAEIERPNECEVEYLDYNG 119
[175][TOP]
>UniRef100_Q4K7V5 Peptide deformylase n=1 Tax=Pseudomonas fluorescens Pf-5
RepID=Q4K7V5_PSEF5
Length = 179
Score = 75.1 bits (183), Expect = 4e-12
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIV- 345
+ +K GD L A + P S ++ ++IDDM + M GVGLAAPQIG+ ++++
Sbjct: 4 EILKMGDERLLRIAPPVPPEMFDSPELWELIDDMFQTMESVGGVGLAAPQIGVDLQLVIF 63
Query: 346 -LEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVE 522
E ++ Y P+ E Q +++NP + S +EGCLSV G R V+
Sbjct: 64 GFEHSERY----PEAEAVPQ-------TILINPLITPLSPVLEEGWEGCLSVPGLRGAVQ 112
Query: 523 RYLDVEVTGLDSNGAPI 573
RY + G D G PI
Sbjct: 113 RYQHIRYEGFDPRGEPI 129
[176][TOP]
>UniRef100_Q0BE11 Peptide deformylase n=1 Tax=Burkholderia ambifaria AMMD
RepID=Q0BE11_BURCM
Length = 177
Score = 75.1 bits (183), Expect = 4e-12
Identities = 48/135 (35%), Positives = 69/135 (51%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GDP L E A+ + ++ + ++ +I+ DM M A G GLAAPQIGI ++I+
Sbjct: 4 EILKMGDPRLLEVAKPV--AQFDTPELHEIVADMFETMHHANGAGLAAPQIGIGLQLII- 60
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + D P V++NPKL+ +EGCLSV G R VV RY
Sbjct: 61 --------FGFGSNNRYPDAPPVPETVLINPKLEYMPPDMEEGWEGCLSVPGMRGVVSRY 112
Query: 529 LDVEVTGLDSNGAPI 573
V +G D GA I
Sbjct: 113 AKVRYSGYDQFGAKI 127
[177][TOP]
>UniRef100_B0KS33 Peptide deformylase n=1 Tax=Pseudomonas putida GB-1
RepID=B0KS33_PSEPG
Length = 178
Score = 75.1 bits (183), Expect = 4e-12
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIV- 345
D +K GD L A + + + ++Q++IDDM MR GVGLAAPQIGI ++++
Sbjct: 4 DILKMGDERLLRIAPPVPEHMLGTAELQQLIDDMFETMRHVGGVGLAAPQIGIDLQLVIF 63
Query: 346 -LEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVE 522
E ++ Y P E Q +++NP + S++ +EGCLSV G R VV
Sbjct: 64 GFERSERY----PDAEAVPQ-------TILLNPVITPTSSEVEDGWEGCLSVPGLRGVVP 112
Query: 523 RYLDVEVTGLDSNGAPI 573
R+ + G+D G PI
Sbjct: 113 RFKHICYEGIDPQGNPI 129
[178][TOP]
>UniRef100_Q1NKU5 Peptide deformylase n=1 Tax=delta proteobacterium MLMS-1
RepID=Q1NKU5_9DELT
Length = 259
Score = 75.1 bits (183), Expect = 4e-12
Identities = 53/166 (31%), Positives = 89/166 (53%), Gaps = 24/166 (14%)
Frame = +1
Query: 151 KKMNL--PDTVKAGDPVLHE-------PAQEIDPSEIKS---------EKVQKIIDDMIR 276
+++NL D +KAGD + + P + + +KS + +++++ DMI
Sbjct: 49 ERLNLYSTDLLKAGDILANRDRIMAIRPVVKFPEASLKSKARPVTEFDDSLRELVADMIA 108
Query: 277 VMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIK------AQDRRPFDLLVIVN 438
M APGVGLAAPQ+G+P +++V+ A E+ + A++R P LV++N
Sbjct: 109 TMHDAPGVGLAAPQVGVPLQVVVILGRVARPELADGEDEQQPPAAVAEERNP--SLVLIN 166
Query: 439 PKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPIK 576
P+L + + EGCLSV + + V+RY V VT LD +G P++
Sbjct: 167 PRLVEGQGE-EVDEEGCLSVRDYSSKVKRYTRVRVTALDLDGQPLE 211
[179][TOP]
>UniRef100_A3L609 Peptide deformylase n=1 Tax=Pseudomonas aeruginosa 2192
RepID=A3L609_PSEAE
Length = 179
Score = 75.1 bits (183), Expect = 4e-12
Identities = 43/135 (31%), Positives = 68/135 (50%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GD L AQ + SE++Q++IDDM M GVGLAAPQIG+ ++++
Sbjct: 4 EILKMGDERLLRIAQPVPSELFGSEELQRLIDDMFETMHHVGGVGLAAPQIGVDLQLVI- 62
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + + D +++NP++ ++ +EGCLSV G R V R+
Sbjct: 63 --------FGFERSERYPDAPAVPPTILLNPRITLLDDEMEEGWEGCLSVPGLRGAVSRH 114
Query: 529 LDVEVTGLDSNGAPI 573
+ GLD G PI
Sbjct: 115 RRIRYQGLDPQGQPI 129
[180][TOP]
>UniRef100_Q3K818 Peptide deformylase n=1 Tax=Pseudomonas fluorescens Pf0-1
RepID=Q3K818_PSEPF
Length = 179
Score = 74.7 bits (182), Expect = 5e-12
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIV- 345
+ +K GD L A + + S ++ ++IDDM + M GVGLAAPQIG+ ++++
Sbjct: 4 EILKMGDERLLRIAPPVPAEMLDSPELWQLIDDMFQTMESVGGVGLAAPQIGVDLQLVIF 63
Query: 346 -LEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVE 522
E ++ Y P E Q +++NP + S FEGCLSV G R V+
Sbjct: 64 GFEHSERY----PDAEAVPQ-------TILINPLITPLSPLMEEGFEGCLSVPGLRGAVD 112
Query: 523 RYLDVEVTGLDSNGAPI 573
RY + G+D G PI
Sbjct: 113 RYQQIRYEGVDPKGEPI 129
[181][TOP]
>UniRef100_B4ECN5 Peptide deformylase n=1 Tax=Burkholderia cenocepacia J2315
RepID=B4ECN5_BURCJ
Length = 177
Score = 74.7 bits (182), Expect = 5e-12
Identities = 48/135 (35%), Positives = 67/135 (49%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GDP L E AQ ++ + ++ +I+ DM M A G GLAAPQIGI +II+
Sbjct: 4 EILKMGDPRLLEVAQPVE--RFDTPELHEIVADMFETMHHANGAGLAAPQIGIGLQIII- 60
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + D P V++NPK++ +EGCLSV G R VV RY
Sbjct: 61 --------FGFGNNNRYPDAPPVPETVLINPKIEYMPPDMEEGWEGCLSVPGMRGVVSRY 112
Query: 529 LDVEVTGLDSNGAPI 573
V +G D G I
Sbjct: 113 AKVRYSGFDQFGQKI 127
[182][TOP]
>UniRef100_Q1YHJ0 Peptide deformylase n=1 Tax=Aurantimonas manganoxydans SI85-9A1
RepID=Q1YHJ0_MOBAS
Length = 170
Score = 74.7 bits (182), Expect = 5e-12
Identities = 45/136 (33%), Positives = 75/136 (55%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + DPVL + ++ P E ++V+++ DDM+ M APG+GLAA QIG P R
Sbjct: 1 MTIKPLIILPDPVLRQTSK---PVETVDDQVRRLADDMLETMYDAPGIGLAAIQIGEPLR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V++ +KE AP+ + +NP++ S+ +++ EGCLS+ + A
Sbjct: 58 MMVIDVSKEEEENAPR--------------IFLNPEILTISDAVSVYEEGCLSIPDYYAE 103
Query: 517 VERYLDVEVTGLDSNG 564
VER +V V L +G
Sbjct: 104 VERPAEVTVRYLGLDG 119
[183][TOP]
>UniRef100_Q1NTV0 Peptide deformylase n=1 Tax=delta proteobacterium MLMS-1
RepID=Q1NTV0_9DELT
Length = 263
Score = 74.7 bits (182), Expect = 5e-12
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 22/158 (13%)
Frame = +1
Query: 169 DTVKAGDPVLHE-------PAQEIDPSEIKS---------EKVQKIIDDMIRVMRKAPGV 300
D +KAGD + + P + + +KS + +++++ DMI M APGV
Sbjct: 57 DILKAGDILANRDRIMAIRPVVKFPEASLKSKARPVTEFDDSLRELVADMIATMHDAPGV 116
Query: 301 GLAAPQIGIPSRIIVLEDTKEYISYAPKEEIK------AQDRRPFDLLVIVNPKLKNKSN 462
GLAAPQ+G+P +++V+ A E+ + A++R P LV++NP+L
Sbjct: 117 GLAAPQVGVPLQVVVILGRVARPELADGEDEQQPPAAVAEERNP--SLVLINPRLVEGQG 174
Query: 463 KTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPIK 576
+ + EGCLSV + + V+RY V VT LD +G P++
Sbjct: 175 E-EVDEEGCLSVRDYSSKVKRYARVRVTALDLDGQPLE 211
[184][TOP]
>UniRef100_C7MC10 N-formylmethionyl-tRNA deformylase n=1 Tax=Brachybacterium faecium
DSM 4810 RepID=C7MC10_BRAFD
Length = 240
Score = 74.7 bits (182), Expect = 5e-12
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Frame = +1
Query: 175 VKAGDPVLHEPA----QEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRII 342
V+AG P L A + ++ ++ + ++ + M MR APGVGLAAPQ+G+P
Sbjct: 32 VQAGHPALRRRAVRARERLEDGRLEVALLLELAEAMTVTMRAAPGVGLAAPQVGLPLSFY 91
Query: 343 VLEDTKEYISYAPKEEI-KAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVV 519
V+ED Y ++E+ +RRP L +++P L+ + FEGCLSVDG++++V
Sbjct: 92 VIED--RYADEPGEDEVGDLLERRPLPLRALLDPVLEPLGTQRVYAFEGCLSVDGWQSIV 149
Query: 520 ER 525
R
Sbjct: 150 PR 151
[185][TOP]
>UniRef100_Q47E58 Peptide deformylase n=1 Tax=Dechloromonas aromatica RCB
RepID=Q47E58_DECAR
Length = 204
Score = 74.3 bits (181), Expect = 6e-12
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL-- 348
++ G+P+L E A+ + +E + +++ +I+DM M A GVGLAAPQIGI ++++
Sbjct: 35 LRMGEPLLFEVAKAV--TEFGTSELRALIEDMFDSMEAAGGVGLAAPQIGIGLQMVIFGF 92
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
E ++ Y D L V++NP + ++ L +EGCLSV G R V R+
Sbjct: 93 EKSERY-----------PDAEAVPLTVLINPLITPVGDEEELGWEGCLSVPGLRGEVPRH 141
Query: 529 LDVEVTGLDSNGAPI 573
+ G D G PI
Sbjct: 142 TRIRYQGFDPEGTPI 156
[186][TOP]
>UniRef100_C3JZ58 Peptide deformylase n=1 Tax=Pseudomonas fluorescens SBW25
RepID=C3JZ58_PSEFS
Length = 179
Score = 74.3 bits (181), Expect = 6e-12
Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIV- 345
+ +K GD L A + P S ++ ++IDDM + M GVGLAAPQIG+ ++++
Sbjct: 4 EILKMGDERLLRIAPPVPPEMFDSPELWQLIDDMFQTMEHVGGVGLAAPQIGVDLQLVIF 63
Query: 346 -LEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVE 522
E ++ Y D P +++NP + +EGCLSV G R V
Sbjct: 64 GFEASERY-----------PDAPPVPQTILINPLITPLGPVLEEGYEGCLSVPGMRGAVS 112
Query: 523 RYLDVEVTGLDSNGAPI 573
RY + G D G PI
Sbjct: 113 RYQQIRYEGFDPKGEPI 129
[187][TOP]
>UniRef100_Q1NNU3 Peptide deformylase n=1 Tax=delta proteobacterium MLMS-1
RepID=Q1NNU3_9DELT
Length = 259
Score = 74.3 bits (181), Expect = 6e-12
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 24/166 (14%)
Frame = +1
Query: 151 KKMNL--PDTVKAGDPVLHE-------PAQEIDPSEIKS---------EKVQKIIDDMIR 276
+++NL D +KAGD + + P + + +KS + ++ ++ DMI
Sbjct: 49 ERLNLYSTDLLKAGDILANRDKIMAIRPVVKFPEASLKSKAAPVTEFDDSLRALVADMIA 108
Query: 277 VMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIK------AQDRRPFDLLVIVN 438
M APGVGLAAPQ+G+P +++V+ A E+ + A++R P LV++N
Sbjct: 109 TMHDAPGVGLAAPQVGVPLQVVVILGRVARPELADGEDEQQPPAAVAEERNP--SLVLIN 166
Query: 439 PKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAPIK 576
P+L + + EGCLSV + + V+RY V VT LD +G P++
Sbjct: 167 PRLVEGQGE-EVDEEGCLSVRDYSSKVKRYARVRVTALDLDGQPLE 211
[188][TOP]
>UniRef100_B5IM61 Peptide deformylase n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IM61_9CHRO
Length = 180
Score = 74.3 bits (181), Expect = 6e-12
Identities = 43/140 (30%), Positives = 69/140 (49%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + ++ GDP L + A + I S ++ ++DD+ M G GLAAPQIG+ R
Sbjct: 1 MAIRPVLRLGDPFLRQVAVAVPRQAIGSPELSALLDDLRDTMAARDGAGLAAPQIGVALR 60
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
+++ T + + P V++NP L + + +EGCLSV G R +
Sbjct: 61 VVIFGFT---------TNPRYPEAPPIPDTVLINPVLTPLGSARSSGWEGCLSVPGLRGL 111
Query: 517 VERYLDVEVTGLDSNGAPIK 576
V R+ + TGLD G P++
Sbjct: 112 VPRWDRIRYTGLDEQGRPLQ 131
[189][TOP]
>UniRef100_A2VXC6 Peptide deformylase n=1 Tax=Burkholderia cenocepacia PC184
RepID=A2VXC6_9BURK
Length = 177
Score = 74.3 bits (181), Expect = 6e-12
Identities = 48/135 (35%), Positives = 68/135 (50%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GDP L E AQ ++ + ++ +I+ DM M A G GLAAPQIGI +II+
Sbjct: 4 EILKMGDPRLLEIAQPVE--RFDTPELHEIVADMFETMHHANGAGLAAPQIGIGLQIII- 60
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + D P V++NPK++ + +EGCLSV G R VV RY
Sbjct: 61 --------FGFGNNNRYPDAPPVPETVLINPKVEYLPPEMEEGWEGCLSVPGMRGVVSRY 112
Query: 529 LDVEVTGLDSNGAPI 573
V +G D G I
Sbjct: 113 AKVRYSGFDQFGQKI 127
[190][TOP]
>UniRef100_A6V966 Peptide deformylase n=1 Tax=Pseudomonas aeruginosa PA7
RepID=A6V966_PSEA7
Length = 179
Score = 73.9 bits (180), Expect = 8e-12
Identities = 41/135 (30%), Positives = 69/135 (51%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GD L A + S+++Q++IDDM MR GVGLAAPQIG+ ++++
Sbjct: 4 EILKMGDERLLRIAPPVPAESFGSQELQRLIDDMFETMRHVGGVGLAAPQIGVDLQLVI- 62
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + + D +++NP++ ++ +EGCLSV G R +V R+
Sbjct: 63 --------FGFERSERYPDAPAVPPTILLNPRITALDDEIEEGWEGCLSVPGLRGMVPRH 114
Query: 529 LDVEVTGLDSNGAPI 573
+ G+D G PI
Sbjct: 115 RRIRYQGVDPQGKPI 129
[191][TOP]
>UniRef100_A4JF80 Peptide deformylase n=1 Tax=Burkholderia vietnamiensis G4
RepID=A4JF80_BURVG
Length = 177
Score = 73.9 bits (180), Expect = 8e-12
Identities = 48/135 (35%), Positives = 67/135 (49%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GDP L E A+ + + + ++ +I+ DM M A G GLAAPQIGI +II+
Sbjct: 4 EILKMGDPRLLEIAEPV--GQFDTPELHEIVADMFETMHHANGAGLAAPQIGIGLQIII- 60
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + D P V++NPK++ +EGCLSV G R VV RY
Sbjct: 61 --------FGFGNNNRYPDAPPVPETVLINPKVEYMPPDMEEGWEGCLSVPGMRGVVSRY 112
Query: 529 LDVEVTGLDSNGAPI 573
V G D GA I
Sbjct: 113 AKVRYVGYDQFGAKI 127
[192][TOP]
>UniRef100_C9Y5Z6 Peptide deformylase 2 n=1 Tax=Curvibacter putative symbiont of
Hydra magnipapillata RepID=C9Y5Z6_9BURK
Length = 179
Score = 73.9 bits (180), Expect = 8e-12
Identities = 47/139 (33%), Positives = 69/139 (49%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + D +K GDP L AQ + +E S+ + ++ DM+ MR A G GLAAPQIG+ +
Sbjct: 1 MTVRDILKMGDPRLLRVAQPV--TEFDSDALHLLVTDMLDTMRAANGAGLAAPQIGVDLQ 58
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
+++ + Y DR V+ NP + ++ +EGCLSV G R V
Sbjct: 59 LVIFGGNERNPRY--------PDRPIVPPTVLCNPVITPLGDEEENDWEGCLSVPGLRGV 110
Query: 517 VERYLDVEVTGLDSNGAPI 573
V R+ + TG D G I
Sbjct: 111 VPRWSRIRYTGFDQYGDAI 129
[193][TOP]
>UniRef100_B0MUB2 Peptide deformylase n=1 Tax=Alistipes putredinis DSM 17216
RepID=B0MUB2_9BACT
Length = 181
Score = 73.9 bits (180), Expect = 8e-12
Identities = 48/129 (37%), Positives = 68/129 (52%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
G PVL E +EI P +V+K+I+DM + +A GVGLAAPQIG R+ +++ T
Sbjct: 9 GAPVLREKCREIGPDY---PEVKKLIEDMFLTLEEAEGVGLAAPQIGKSIRLFIVDCT-- 63
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEV 543
+ A RR F +NP++ S +T L+ EGCLS+ G V R L + +
Sbjct: 64 --PWGEDHPELADYRRAF-----INPEIYEVSEETKLYEEGCLSLPGLHESVRRSLAIRM 116
Query: 544 TGLDSNGAP 570
LD N P
Sbjct: 117 RYLDENFEP 125
[194][TOP]
>UniRef100_A3VQI7 Peptide deformylase n=1 Tax=Parvularcula bermudensis HTCC2503
RepID=A3VQI7_9PROT
Length = 170
Score = 73.9 bits (180), Expect = 8e-12
Identities = 47/138 (34%), Positives = 71/138 (51%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + V A DP L E + +D + ++++ ++DDM+ M APG+GLAA QIG+P R
Sbjct: 1 MTIRPIVTAPDPRLREISTPVDGVD---DELRALMDDMLETMYAAPGIGLAAIQIGVPKR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
+IV++ E AP+ VNP ++N + A + EGCLSV +
Sbjct: 58 VIVMDLAGEGEPPAPR--------------YFVNPVIRNPATDLAPYQEGCLSVPDYYEE 103
Query: 517 VERYLDVEVTGLDSNGAP 570
+ER V LD +G P
Sbjct: 104 IERPATCTVDYLDYDGTP 121
[195][TOP]
>UniRef100_A2W998 Peptide deformylase n=1 Tax=Burkholderia dolosa AUO158
RepID=A2W998_9BURK
Length = 177
Score = 73.9 bits (180), Expect = 8e-12
Identities = 48/135 (35%), Positives = 67/135 (49%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GDP L E A+ + + + ++ +I+ DM M A G GLAAPQIGI +II+
Sbjct: 4 EILKMGDPRLLEVAEPV--RQFDTPELHEIVADMFDTMHHANGAGLAAPQIGIGLQIII- 60
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + D P V++NPK++ +EGCLSV G R VV RY
Sbjct: 61 --------FGFGSNNRYPDAPPVPETVLINPKIEYMPPDMEEGWEGCLSVPGMRGVVSRY 112
Query: 529 LDVEVTGLDSNGAPI 573
V G D GA I
Sbjct: 113 AKVRYVGFDQFGAKI 127
[196][TOP]
>UniRef100_A5CF65 Peptide deformylase n=1 Tax=Orientia tsutsugamushi str. Boryong
RepID=DEF_ORITB
Length = 181
Score = 73.9 bits (180), Expect = 8e-12
Identities = 49/133 (36%), Positives = 74/133 (55%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M++ V A DP+L + + +D ++ ++++IDDM+ M GVGLAAPQ+ + R
Sbjct: 1 MSILSLVTAPDPILKKVSSPVDTV---NDSIRQLIDDMLETMYHNHGVGLAAPQVAVSKR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
IIVL+ +K I EE + L +VNP +K SN+T EGCLS+
Sbjct: 58 IIVLDLSKVDI-----EEDNITNSEYKYPLFMVNPIVKAISNQTVTAKEGCLSLPKQAIE 112
Query: 517 VERYLDVEVTGLD 555
V RY +++VT LD
Sbjct: 113 VSRYHEIQVTYLD 125
[197][TOP]
>UniRef100_A9WHG7 Peptide deformylase n=2 Tax=Chloroflexus RepID=DEF_CHLAA
Length = 188
Score = 73.9 bits (180), Expect = 8e-12
Identities = 40/114 (35%), Positives = 63/114 (55%)
Frame = +1
Query: 223 PSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQ 402
P ++ +++++ DM MR A GVGLAAPQIGIP ++ ++E EY A ++
Sbjct: 24 PVKLPDRNLKQLVADMFETMRAAHGVGLAAPQIGIPIQLCIIEIPAEYEERADGSVVEVA 83
Query: 403 DRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
P+ V++NP++ S + + EGCLS+ G+ +V R V V D NG
Sbjct: 84 PAEPY---VLINPRIVKMSGEEVMRDEGCLSLPGWYGMVPRQTWVTVEFQDLNG 134
[198][TOP]
>UniRef100_Q15Q99 Peptide deformylase n=1 Tax=Pseudoalteromonas atlantica T6c
RepID=Q15Q99_PSEA6
Length = 188
Score = 73.6 bits (179), Expect = 1e-11
Identities = 42/131 (32%), Positives = 72/131 (54%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
+ G+ +L PA+ + ++I++ Q+ +D ++ M++A GVG+AAPQ+ R +++ +
Sbjct: 6 QVGEVILRTPAKSVSQTDIETGAFQEFVDALLATMQEANGVGIAAPQV-FDERAVMIIAS 64
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
+ Y A D P LV++NPK+ S +T +EGCLSV G R + R V
Sbjct: 65 RPSPRYP-----NAPDMEP---LVLINPKVIQSSEETVKDWEGCLSVPGLRGFIRRATWV 116
Query: 538 EVTGLDSNGAP 570
E+ L +G P
Sbjct: 117 EIEYLQRDGTP 127
[199][TOP]
>UniRef100_B9J8C4 Peptide deformylase n=1 Tax=Agrobacterium radiobacter K84
RepID=B9J8C4_AGRRK
Length = 171
Score = 73.6 bits (179), Expect = 1e-11
Identities = 43/136 (31%), Positives = 76/136 (55%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + DP+L + ++ P E ++ ++ DDM+ M APG+GLAA QIG+ R
Sbjct: 1 MTIKPLIILPDPLLRQASK---PIERVDTEILRLADDMLETMYDAPGIGLAAVQIGVARR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V++ +E +D++P LV +NP++ S++ +++ EGCLS+ + A
Sbjct: 58 MLVIDVARE-----------GEDKQP---LVFINPEVVASSDERSVYEEGCLSIPDYYAE 103
Query: 517 VERYLDVEVTGLDSNG 564
VER V V +D +G
Sbjct: 104 VERPARVTVKHIDRDG 119
[200][TOP]
>UniRef100_A0K8E7 Peptide deformylase n=3 Tax=Burkholderia cenocepacia
RepID=A0K8E7_BURCH
Length = 177
Score = 73.6 bits (179), Expect = 1e-11
Identities = 48/135 (35%), Positives = 67/135 (49%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GDP L E AQ ++ + ++ +I+ DM M A G GLAAPQIGI +II+
Sbjct: 4 EILKMGDPRLLEIAQPVE--RFDTPELHEIVADMFETMHHANGAGLAAPQIGIGLQIII- 60
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + D P V++NPK++ +EGCLSV G R VV RY
Sbjct: 61 --------FGFGNNNRYPDAPPVPETVLINPKVEYLPPDMEEGWEGCLSVPGMRGVVSRY 112
Query: 529 LDVEVTGLDSNGAPI 573
V +G D G I
Sbjct: 113 AKVRYSGFDQFGQKI 127
[201][TOP]
>UniRef100_C4FR24 Peptide deformylase n=1 Tax=Veillonella dispar ATCC 17748
RepID=C4FR24_9FIRM
Length = 162
Score = 73.6 bits (179), Expect = 1e-11
Identities = 47/139 (33%), Positives = 75/139 (53%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + D VKAG PVL + A+ P E ++K++ +IDDM M + GVGLAAPQ+ + R
Sbjct: 1 MAVLDVVKAGHPVLKQIAE---PVEHVNKKLRALIDDMAETMYETEGVGLAAPQVAVSKR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
IIV++ D L+ ++NP++ + + + + EGCLSV G+
Sbjct: 58 IIVVD-----------------DHAGSGLIALINPEITH-AEGSQVGPEGCLSVPGYFGD 99
Query: 517 VERYLDVEVTGLDSNGAPI 573
VER+ + V G+D + +
Sbjct: 100 VERFDKITVKGIDPHNKKV 118
[202][TOP]
>UniRef100_UPI0001BB4A21 peptide deformylase n=1 Tax=alpha proteobacterium HIMB114
RepID=UPI0001BB4A21
Length = 171
Score = 73.2 bits (178), Expect = 1e-11
Identities = 45/136 (33%), Positives = 82/136 (60%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M++ + +K DP+L + + E+ S++ ++ ++ ++D+M+ M +APG+GLAAPQ+GI +
Sbjct: 1 MSVLEILKEPDPILRKKSDEV--SKVDND-IRALMDNMLETMYQAPGIGLAAPQVGILKK 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
+IV++ KE + ++P L I NPK+ KS++ + EGCLS+ G+ A
Sbjct: 58 VIVIDLAKE-----------DEPKKP---LFIANPKIIWKSDELSSREEGCLSIPGYFAE 103
Query: 517 VERYLDVEVTGLDSNG 564
V R ++ LD +G
Sbjct: 104 VVRPTKCKLQYLDYDG 119
[203][TOP]
>UniRef100_C0VVY0 Peptide deformylase n=2 Tax=Corynebacterium glucuronolyticum
RepID=C0VVY0_9CORY
Length = 177
Score = 73.2 bits (178), Expect = 1e-11
Identities = 44/127 (34%), Positives = 64/127 (50%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDPVL E +P + + + ++ DM+ M A GVGLAA Q+G+ R+ V +
Sbjct: 9 GDPVL---VSEAEPVDEVTASTKTLVSDMLETMDSAGGVGLAANQVGVLQRVFVYD---- 61
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEV 543
P ++ R + I+NP + + L EGCLS+ A ERY++V V
Sbjct: 62 ----CPVDDSDPNPDREYKRGAIINPVWEPVGEEMQLGQEGCLSIPDVYADTERYMNVHV 117
Query: 544 TGLDSNG 564
TGLD NG
Sbjct: 118 TGLDENG 124
[204][TOP]
>UniRef100_P63913 Peptide deformylase n=24 Tax=Brucella RepID=DEF_BRUME
Length = 175
Score = 73.2 bits (178), Expect = 1e-11
Identities = 46/138 (33%), Positives = 72/138 (52%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M++ + DPVL + ++ P E ++++K DM M APG+GLAA Q+G P R
Sbjct: 1 MSVKPLIILPDPVLRQVSK---PVERFDDQLRKFASDMFDTMYDAPGIGLAAIQVGEPIR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V++ KE AP + VNP + S+K + + EGCLS+ + A
Sbjct: 58 MLVIDLAKEGEPKAPH--------------IFVNPTIVQSSDKRSTYEEGCLSIPDYYAE 103
Query: 517 VERYLDVEVTGLDSNGAP 570
VER V+V D++G P
Sbjct: 104 VERPATVKVNYFDADGKP 121
[205][TOP]
>UniRef100_B6BRB5 Peptide deformylase n=1 Tax=Candidatus Pelagibacter sp. HTCC7211
RepID=B6BRB5_9RICK
Length = 172
Score = 73.2 bits (178), Expect = 1e-11
Identities = 46/136 (33%), Positives = 74/136 (54%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + +P+L + ++ +D ++ E+ Q ++DDM+ M APG+GLAA Q+G+P R
Sbjct: 1 MTIKTIITEPNPLLRQVSKPVD--QVGKEE-QILMDDMLETMYDAPGIGLAAIQVGVPKR 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
IIV++ +KE P+ VNP +KNK + + + EGCLSV A
Sbjct: 58 IIVMDISKEEGKKEPR--------------YFVNPVIKNKDSIKSTYEEGCLSVPNQFAE 103
Query: 517 VERYLDVEVTGLDSNG 564
++R EV LD +G
Sbjct: 104 IDRPSKCEVEYLDYHG 119
[206][TOP]
>UniRef100_O66847 Peptide deformylase n=1 Tax=Aquifex aeolicus RepID=DEF_AQUAE
Length = 169
Score = 73.2 bits (178), Expect = 1e-11
Identities = 46/136 (33%), Positives = 76/136 (55%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
D V + +L +P +++D + ++V+ +I DM M +A GVGLAA QIG+P ++V+
Sbjct: 4 DIVIYPNEILKKPTEKVD---VIDKEVKNLIRDMFDTMYEAEGVGLAANQIGVPLSVMVI 60
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ +PKE+ P LV++NP++K K + EGCLS G VER+
Sbjct: 61 DT-------SPKED------APPLKLVLINPEIKEGEGKIK-YKEGCLSFPGLSVEVERF 106
Query: 529 LDVEVTGLDSNGAPIK 576
V+V L+ +G P++
Sbjct: 107 QKVKVNALNEHGEPVE 122
[207][TOP]
>UniRef100_Q7WQS9 Peptide deformylase 1 n=3 Tax=Bordetella RepID=DEF1_BORBR
Length = 170
Score = 73.2 bits (178), Expect = 1e-11
Identities = 44/138 (31%), Positives = 72/138 (52%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M L ++ DP LH+ A+ P + +++++++ DM M APGVGLAA Q+ + R
Sbjct: 1 MALLSILRYPDPRLHKTAK---PVAVVDDRIRQLVRDMADTMYDAPGVGLAATQVDVHER 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V++ ++E DL V++NP++ KS++ + EGCLSV G
Sbjct: 58 VVVIDVSEE----------------GNDLRVLINPEITWKSDERQTYEEGCLSVPGIYDE 101
Query: 517 VERYLDVEVTGLDSNGAP 570
VER + LD G P
Sbjct: 102 VERAARIRCKALDQQGQP 119
[208][TOP]
>UniRef100_UPI00019137E2 peptide deformylase n=1 Tax=Salmonella enterica subsp. enterica
serovar Typhi str. M223 RepID=UPI00019137E2
Length = 148
Score = 72.8 bits (177), Expect = 2e-11
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Frame = +1
Query: 193 VLHEPAQEI----DPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTK 360
VLH P + + P E + ++Q+I+DDM M G+GLAA Q+ I RIIV++ ++
Sbjct: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE 65
Query: 361 EYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVE 540
+D R LV++NP+L KS +T + EGCLS+ RA+V R V+
Sbjct: 66 N------------RDER----LVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVK 108
Query: 541 VTGLDSNGAPIK 576
+ LD NG P +
Sbjct: 109 IRALDRNGNPFE 120
[209][TOP]
>UniRef100_UPI0001910B90 peptide deformylase n=2 Tax=Salmonella enterica subsp. enterica
serovar Typhi RepID=UPI0001910B90
Length = 135
Score = 72.8 bits (177), Expect = 2e-11
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Frame = +1
Query: 193 VLHEPAQEI----DPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTK 360
VLH P + + P E + ++Q+I+DDM M G+GLAA Q+ I RIIV++ ++
Sbjct: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE 65
Query: 361 EYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVE 540
+D R LV++NP+L KS +T + EGCLS+ RA+V R V+
Sbjct: 66 N------------RDER----LVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVK 108
Query: 541 VTGLDSNGAPIK 576
+ LD NG P +
Sbjct: 109 IRALDRNGNPFE 120
[210][TOP]
>UniRef100_Q2JXI3 Peptide deformylase n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JXI3_SYNJA
Length = 175
Score = 72.8 bits (177), Expect = 2e-11
Identities = 42/120 (35%), Positives = 70/120 (58%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
GDP+L + A+ + +E + +Q +I++M+ +++A GVGLAAPQ+G P ++I++
Sbjct: 9 GDPILTQVAEPV--AEFGTPALQNLIEEMLATLKEAQGVGLAAPQVGFPLQVIIV----- 61
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEV 543
A + + D + LV+VNP+ S + L +EGCLSV R +V R +VEV
Sbjct: 62 ----ASRPNPRYPDAPQMEPLVMVNPRPLACSEEQVLGWEGCLSVPNCRGLVARSREVEV 117
[211][TOP]
>UniRef100_Q117U9 Peptide deformylase n=1 Tax=Trichodesmium erythraeum IMS101
RepID=Q117U9_TRIEI
Length = 187
Score = 72.8 bits (177), Expect = 2e-11
Identities = 47/144 (32%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
Frame = +1
Query: 145 NKKKM-NLP-DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQ 318
NK+K+ N P + GD L + A+ + +++ S+ ++K++ +M++ M A G+GLAAPQ
Sbjct: 8 NKEKLENSPLEIYYLGDRSLRQSAKRV--AKVDSD-MRKLVREMLQTMYTADGIGLAAPQ 64
Query: 319 IGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSV 498
+ + ++IV++ + P LV++NP +K SN LF EGCLS+
Sbjct: 65 VNVQKQVIVIDCEPTNSATPP--------------LVLINPTIKKYSNDICLFQEGCLSI 110
Query: 499 DGFRAVVERYLDVEVTGLDSNGAP 570
G V+R ++EV D NG P
Sbjct: 111 PGVYLDVQRPSEIEVAYKDENGRP 134
[212][TOP]
>UniRef100_A9IFQ3 Peptide deformylase n=1 Tax=Bordetella petrii DSM 12804
RepID=A9IFQ3_BORPD
Length = 170
Score = 72.8 bits (177), Expect = 2e-11
Identities = 42/128 (32%), Positives = 70/128 (54%)
Frame = +1
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEY 366
DP LH+ A+ P + ++++K++ DM M APGVGLAA Q+ + R++V++ ++E
Sbjct: 11 DPRLHKKAK---PVAVVDDRIRKLVRDMADTMYDAPGVGLAATQVDVHERVVVIDVSEE- 66
Query: 367 ISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVT 546
+L V++NP++ KS++ + EGCLSV G VER +
Sbjct: 67 ---------------GNELRVLINPEITWKSDERQTYEEGCLSVPGIYDEVERAARIRYR 111
Query: 547 GLDSNGAP 570
LD++G P
Sbjct: 112 ALDADGNP 119
[213][TOP]
>UniRef100_A5GPA0 Peptide deformylase n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GPA0_SYNPW
Length = 177
Score = 72.8 bits (177), Expect = 2e-11
Identities = 41/136 (30%), Positives = 70/136 (51%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + ++ G P L + A++I+ ++++Q +IDD++ G GLAAPQI P R
Sbjct: 1 MTIRAVLRLGHPALRQRARDIEDEVFGTQQLQTLIDDLLETKAARSGAGLAAPQIDEPWR 60
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V+ + + P V++NP++ S T+ +EGCLSV G R
Sbjct: 61 VVVV---------GMGANPRYPEAPPVPERVLINPEITPLSEATSAGWEGCLSVPGLRGE 111
Query: 517 VERYLDVEVTGLDSNG 564
VER+ + ++ D NG
Sbjct: 112 VERWQRIHLSWRDPNG 127
[214][TOP]
>UniRef100_B6AZV5 Peptide deformylase n=1 Tax=Rhodobacterales bacterium HTCC2083
RepID=B6AZV5_9RHOB
Length = 172
Score = 72.8 bits (177), Expect = 2e-11
Identities = 43/109 (39%), Positives = 63/109 (57%)
Frame = +1
Query: 238 SEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPF 417
S+K++ DDM+ M APG+GLAAPQ+G+ R+IVL+ KE D
Sbjct: 24 SDKIRSFADDMLETMYTAPGIGLAAPQVGVLERMIVLDCVKE-------------DGAKP 70
Query: 418 DLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
+ LV+VNP++ S++T ++ EGCLS+ A V R +V V LD +G
Sbjct: 71 EPLVMVNPRVIAASDETNVYDEGCLSIPDQYADVTRPKEVRVEWLDLDG 119
[215][TOP]
>UniRef100_Q8Z1W9 Peptide deformylase n=1 Tax=Salmonella enterica subsp. enterica
serovar Typhi RepID=DEF_SALTI
Length = 169
Score = 72.8 bits (177), Expect = 2e-11
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Frame = +1
Query: 193 VLHEPAQEI----DPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTK 360
VLH P + + P E + ++Q+I+DDM M G+GLAA Q+ I RIIV++ ++
Sbjct: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE 65
Query: 361 EYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVE 540
+D R LV++NP+L KS +T + EGCLS+ RA+V R V+
Sbjct: 66 N------------RDER----LVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVK 108
Query: 541 VTGLDSNGAPIK 576
+ LD NG P +
Sbjct: 109 IRALDRNGNPFE 120
[216][TOP]
>UniRef100_Q39F39 Peptide deformylase n=1 Tax=Burkholderia sp. 383 RepID=Q39F39_BURS3
Length = 177
Score = 72.4 bits (176), Expect = 2e-11
Identities = 46/135 (34%), Positives = 67/135 (49%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GDP L E A+ ++ + ++ +I+ DM M A G GLAAPQIGI ++I+
Sbjct: 4 EILKMGDPRLLEVAKPVE--RFDTPELHEIVADMFETMHHANGAGLAAPQIGIGLQLII- 60
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + D P V++NPK++ +EGCLSV G R VV RY
Sbjct: 61 --------FGFGNNNRYPDAPPVPETVLINPKVEYMPPDMEEGWEGCLSVPGMRGVVSRY 112
Query: 529 LDVEVTGLDSNGAPI 573
V +G D G I
Sbjct: 113 AKVRYSGFDQYGEKI 127
[217][TOP]
>UniRef100_C1DV92 Peptide deformylase n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1
RepID=C1DV92_SULAA
Length = 179
Score = 72.4 bits (176), Expect = 2e-11
Identities = 44/129 (34%), Positives = 71/129 (55%)
Frame = +1
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEY 366
D +L EP +EID +++++ ID M M K GVGLAA QIGIP +I+V++
Sbjct: 10 DKILKEPTKEID---FFDDRLKEYIDKMWEFMYKEEGVGLAANQIGIPYQILVIDT---- 62
Query: 367 ISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVT 546
+ +E+ ++ P +V++NPK+ K + + EGCLS G + + RY V+V
Sbjct: 63 ---SIREKKNEEETEPPVKMVLINPKIVEKEGQ-VMSTEGCLSFPGVQITIPRYKRVKVV 118
Query: 547 GLDSNGAPI 573
G + G +
Sbjct: 119 GKNEKGEDV 127
[218][TOP]
>UniRef100_A2SGT3 Peptide deformylase n=1 Tax=Methylibium petroleiphilum PM1
RepID=A2SGT3_METPP
Length = 177
Score = 72.4 bits (176), Expect = 2e-11
Identities = 49/141 (34%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + D +K GDP L A + E + + +I+DM M A G GLAAPQIG+ +
Sbjct: 1 MAVRDILKMGDPRLLRIAHPV--REFDTPALHALIEDMFDTMEAANGAGLAAPQIGVDLQ 58
Query: 337 IIVLEDTK-EYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRA 513
+++ TK E AP P V++NP++ S +EGCLSV G R
Sbjct: 59 LVIFGFTKSERYPEAP----------PVPRTVLINPQITPLSEDLEDGWEGCLSVPGLRG 108
Query: 514 VVERYLDVEVTGLDSNGAPIK 576
VV R+ + TG D G I+
Sbjct: 109 VVPRHQRIRYTGFDPQGRRIE 129
[219][TOP]
>UniRef100_A1KBM0 Peptide deformylase n=1 Tax=Azoarcus sp. BH72 RepID=A1KBM0_AZOSB
Length = 177
Score = 72.4 bits (176), Expect = 2e-11
Identities = 43/136 (31%), Positives = 71/136 (52%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
D ++ GDP L A+ + ++++++I+ DM+ M A GVGLAAPQ+GI R+++
Sbjct: 4 DILRMGDPRLMRAARPV--CAFGTDELRRIVADMVETMHAAGGVGLAAPQVGIDLRLVI- 60
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ + + D P V+ NP L S++ +EGCLSV G R V R+
Sbjct: 61 --------FGFERSERYPDAPPVPFTVLANPVLTPLSDELEEGWEGCLSVPGLRGWVPRF 112
Query: 529 LDVEVTGLDSNGAPIK 576
+ G D +G P++
Sbjct: 113 RHLLYRGADIDGKPLE 128
[220][TOP]
>UniRef100_A9EAZ8 Peptide deformylase n=1 Tax=Kordia algicida OT-1 RepID=A9EAZ8_9FLAO
Length = 196
Score = 72.4 bits (176), Expect = 2e-11
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
V GDPVL + A++I P + ++++M M A GVGLAAPQ+G+P R+ +++
Sbjct: 6 VAFGDPVLRKVAKDITPDY---PNLDTLLENMFETMYNAYGVGLAAPQVGLPIRLFMIDA 62
Query: 355 TKEYISYAPKEEIKAQDRRPFDLL--VIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
T +A EE+ + R+ + + V +N K+ ++ + +F EGCLS+ R V R
Sbjct: 63 T----GFAEDEELDEEQRKQLEGMKKVFINAKIIERNGEPWVFNEGCLSIPDIREDVFRP 118
Query: 529 LDVEVTGLDSN 561
+++ +D N
Sbjct: 119 ESIKIEYMDEN 129
[221][TOP]
>UniRef100_Q31NJ9 Peptide deformylase n=2 Tax=Synechococcus elongatus
RepID=Q31NJ9_SYNE7
Length = 192
Score = 72.0 bits (175), Expect = 3e-11
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Frame = +1
Query: 148 KKKMNLP--DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQI 321
KKK+ P D GD VL +PA+ + + +++++ I M++ M A G+GLAAPQ+
Sbjct: 11 KKKLAKPPLDLHYLGDRVLRQPAKRVSRID---DELRQTIRQMLQTMYSADGIGLAAPQV 67
Query: 322 GIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVD 501
GI ++IV++ E++ + P LV++NPK++ + EGCLS+
Sbjct: 68 GINKQLIVID-----------LELEDEQAPP---LVLINPKIERTAGDLEQCQEGCLSIP 113
Query: 502 GFRAVVERYLDVEVTGLDSNGAP 570
G VER VEV+ D NG P
Sbjct: 114 GVYLDVERPEIVEVSYKDENGRP 136
[222][TOP]
>UniRef100_Q16AL4 Peptide deformylase n=1 Tax=Roseobacter denitrificans OCh 114
RepID=Q16AL4_ROSDO
Length = 175
Score = 72.0 bits (175), Expect = 3e-11
Identities = 45/127 (35%), Positives = 77/127 (60%)
Frame = +1
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEY 366
DP L + A+ + ++I S++++++ DDM+ M APG+GLAAPQ+GI R++V++ KE
Sbjct: 13 DPRLKKTAEPV--ADI-SDELRRLGDDMLETMYDAPGIGLAAPQVGILQRVVVMDCIKE- 68
Query: 367 ISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVT 546
RP +++ NP++ S++T+++ EGCLS+ A V R +VEV
Sbjct: 69 ---------PGDTPRP---VIMFNPEVIATSDETSVYEEGCLSIPEQFAEVTRPAEVEVR 116
Query: 547 GLDSNGA 567
+D +GA
Sbjct: 117 WMDRDGA 123
[223][TOP]
>UniRef100_B2V616 Peptide deformylase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1
RepID=B2V616_SULSY
Length = 177
Score = 72.0 bits (175), Expect = 3e-11
Identities = 44/130 (33%), Positives = 71/130 (54%)
Frame = +1
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEY 366
DP+L EP +E+D E++Q+ I+ M M K GVGLAA QIGIP +I+V++ +
Sbjct: 10 DPILKEPTKEVD---FFDERLQEYINKMWEFMYKEEGVGLAANQIGIPYQILVIDTSL-- 64
Query: 367 ISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVT 546
+E+ ++ P +V++NPK+ K + EGCLS G + + R V+V
Sbjct: 65 -----REKRSEEEAEPPVKMVLINPKIVEKEGEVQ-STEGCLSFPGVQITIPRAKRVKVV 118
Query: 547 GLDSNGAPIK 576
G + G ++
Sbjct: 119 GKNEKGEDVE 128
[224][TOP]
>UniRef100_A1TRS8 Peptide deformylase n=1 Tax=Acidovorax citrulli AAC00-1
RepID=A1TRS8_ACIAC
Length = 200
Score = 72.0 bits (175), Expect = 3e-11
Identities = 45/139 (32%), Positives = 69/139 (49%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + D +K GD L A+ + +E + + +++ DM MR G GLAAPQIG+ +
Sbjct: 22 MAIHDILKMGDERLLRTARPV--AEFGTPSLLQLVQDMRDTMRAVNGAGLAAPQIGVDLQ 79
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
+++ + Y DR V+VNP++ + +EGCLSV G R V
Sbjct: 80 VVIFGSEERNPRYP--------DRPLVPPTVLVNPRITPLGGEEEEDWEGCLSVPGLRGV 131
Query: 517 VERYLDVEVTGLDSNGAPI 573
V R+ + G D +GAPI
Sbjct: 132 VPRWSRIHYRGFDEHGAPI 150
[225][TOP]
>UniRef100_Q6SHN7 Peptide deformylase n=1 Tax=uncultured marine bacterium 313
RepID=Q6SHN7_9BACT
Length = 185
Score = 72.0 bits (175), Expect = 3e-11
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Frame = +1
Query: 241 EKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEI---KAQDRR 411
E +QK+++DM+ M APG+GLAA Q+G+P R+IVL+ I + K E + QD R
Sbjct: 26 EDLQKLMNDMLETMYAAPGIGLAAIQVGVPKRVIVLD-----IGWRDKPESTNDEKQDER 80
Query: 412 PFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNGAP 570
+ + VNP++ KS + + EGCLSV G A ++R + LD G P
Sbjct: 81 K-NPIYFVNPEIITKSTNNSTYEEGCLSVPGQFAEIDRPDKCHIKYLDYYGQP 132
[226][TOP]
>UniRef100_C7HTD3 Peptide deformylase n=1 Tax=Anaerococcus vaginalis ATCC 51170
RepID=C7HTD3_9FIRM
Length = 154
Score = 72.0 bits (175), Expect = 3e-11
Identities = 46/129 (35%), Positives = 75/129 (58%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
+ GDP+L + ++E+ E+ +++++ ++DDM M KA GVGLAAPQ+G+ R+IV+
Sbjct: 8 QVGDPILRKTSKEV--KEV-NDRIKILLDDMAETMYKADGVGLAAPQVGLLKRVIVV--- 61
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
+++ +D L+ +VNP++ K + + EGCLSV F A V+R V
Sbjct: 62 ----------DVRDED----GLIKLVNPEIIEKDGE-QVGVEGCLSVPNFNANVKRPAHV 106
Query: 538 EVTGLDSNG 564
V LD NG
Sbjct: 107 VVKYLDENG 115
[227][TOP]
>UniRef100_B6W6K8 Peptide deformylase n=1 Tax=Anaerococcus hydrogenalis DSM 7454
RepID=B6W6K8_9FIRM
Length = 162
Score = 72.0 bits (175), Expect = 3e-11
Identities = 47/129 (36%), Positives = 75/129 (58%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
+ GDP+L + ++E+ E+ +++++ ++DDM M KA GVGLAAPQ+G+ R+IV+
Sbjct: 17 QVGDPILRKTSKEV--KEV-NDRIKILLDDMAETMYKADGVGLAAPQVGLLKRVIVV--- 70
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
+I+ +D L+ +VNP++ K + + EGCLSV F A V+R V
Sbjct: 71 ----------DIRDED----GLIKLVNPEIIEKDGE-QVGVEGCLSVPNFNANVKRPAHV 115
Query: 538 EVTGLDSNG 564
V LD NG
Sbjct: 116 IVKYLDENG 124
[228][TOP]
>UniRef100_B5WW20 Peptide deformylase n=1 Tax=Burkholderia sp. H160
RepID=B5WW20_9BURK
Length = 177
Score = 72.0 bits (175), Expect = 3e-11
Identities = 44/135 (32%), Positives = 66/135 (48%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
D +K GDP L A+ +D + ++ +++ DM M A G GLAAPQIG+ ++++
Sbjct: 4 DILKMGDPRLLRIAEPVD--HFDTPELHRLVADMFETMHAANGAGLAAPQIGVDLQVVIF 61
Query: 349 EDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERY 528
+ E + D P V++NP + S +EGCLSV G R VV R+
Sbjct: 62 -------GFGSNE--RYPDAPPVPETVLINPTITPVSQDMEESWEGCLSVPGLRGVVSRF 112
Query: 529 LDVEVTGLDSNGAPI 573
+ G D G PI
Sbjct: 113 SMIRYHGFDQFGNPI 127
[229][TOP]
>UniRef100_B8FHH0 Peptide deformylase n=1 Tax=Desulfatibacillum alkenivorans AK-01
RepID=DEF_DESAA
Length = 172
Score = 72.0 bits (175), Expect = 3e-11
Identities = 45/140 (32%), Positives = 72/140 (51%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M L D V P+L +P + I+ + E + +++DM + APG+GLAA Q+G+
Sbjct: 1 MALLDIVTYPAPILGKPCKLIEDID---EDLVCLVEDMTETLYDAPGLGLAAVQVGVDKA 57
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
++V + ++ ++ L V++NPK+ + K EGCLSV FRA
Sbjct: 58 MLVYDVAED------------ENSESTGLKVLINPKIVHTEGKVTSENEGCLSVPEFRAD 105
Query: 517 VERYLDVEVTGLDSNGAPIK 576
V R+ V V G+D G P+K
Sbjct: 106 VPRFACVTVEGVDHEGKPVK 125
[230][TOP]
>UniRef100_Q82TW4 Peptide deformylase 1 n=1 Tax=Nitrosomonas europaea
RepID=DEF1_NITEU
Length = 176
Score = 72.0 bits (175), Expect = 3e-11
Identities = 41/133 (30%), Positives = 71/133 (53%)
Frame = +1
Query: 175 VKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
+K GDP L +PA+ +D + + +++ ++ DM M G GLAAPQIG+ ++++
Sbjct: 6 LKMGDPCLLQPARRVD--QFGTPELEALLQDMQDTMAALNGAGLAAPQIGVSLQVVIFG- 62
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
+ ++P+ D V++NP L + + +EGCLS+ G R +V RY
Sbjct: 63 ----VEHSPRYP----DAESVPFTVLINPVLTPLTEQMEEDWEGCLSIPGMRGLVPRYTR 114
Query: 535 VEVTGLDSNGAPI 573
+ G+D+ GA I
Sbjct: 115 LRYQGVDAAGASI 127
[231][TOP]
>UniRef100_Q3SKP4 Peptide deformylase n=1 Tax=Thiobacillus denitrificans ATCC 25259
RepID=Q3SKP4_THIDA
Length = 177
Score = 71.6 bits (174), Expect = 4e-11
Identities = 44/140 (31%), Positives = 75/140 (53%)
Frame = +1
Query: 157 MNLPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSR 336
M + + +K GDP L PA+ ++ + ++ +++ DM MR G GLAAPQIG+ +
Sbjct: 1 MAVREVLKMGDPRLLAPARAVE--RFATAELAQLVADMHDTMRALNGAGLAAPQIGVSLQ 58
Query: 337 IIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAV 516
+++ E ++ P+ D L V+VNP + S+ T +EGCLSV G R +
Sbjct: 59 VVIFE-----VNANPRYP----DAAEVPLTVLVNPVVTPLSDATEEGWEGCLSVPGMRGL 109
Query: 517 VERYLDVEVTGLDSNGAPIK 576
V R+ ++ G D+ G ++
Sbjct: 110 VPRHGEIHYRGFDAAGRALE 129
[232][TOP]
>UniRef100_Q2INW9 Peptide deformylase n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C
RepID=Q2INW9_ANADE
Length = 185
Score = 71.6 bits (174), Expect = 4e-11
Identities = 45/130 (34%), Positives = 71/130 (54%)
Frame = +1
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEY 366
DP+L E AQ +D + + +++++DDM M A GVGLAAPQI + R+IV++
Sbjct: 10 DPILKEVAQPVDRVD---DGIRRLLDDMAETMYAADGVGLAAPQIAVKKRVIVIDT---- 62
Query: 367 ISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVT 546
+P++E + LL +VNP++ + + EGCLS+ G V+R+ V V
Sbjct: 63 ---SPRQEGQT-------LLHLVNPEIVRGEGELT-YTEGCLSIPGEAEDVDRFARVWVR 111
Query: 547 GLDSNGAPIK 576
LD G P +
Sbjct: 112 ALDRQGKPFE 121
[233][TOP]
>UniRef100_C6CI00 Peptide deformylase n=1 Tax=Dickeya zeae Ech1591 RepID=C6CI00_DICZE
Length = 169
Score = 71.6 bits (174), Expect = 4e-11
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Frame = +1
Query: 193 VLHEPAQEI----DPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTK 360
VLH P + + P + + ++Q+I+DDM M + G+GLAA Q+ I RIIV++ ++
Sbjct: 6 VLHFPDERLRIQAKPVKEVNAEIQRIVDDMFDTMYEEEGIGLAATQVDIHQRIIVIDVSE 65
Query: 361 EYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVE 540
E +D+R LV++NP+L KS T + EGCLS+ RA+V R V+
Sbjct: 66 E------------RDQR----LVLINPELLEKSGDTGI-EEGCLSIPETRALVPRAEHVK 108
Query: 541 VTGLDSNGAPIK 576
V LD G P +
Sbjct: 109 VRALDREGKPFE 120
[234][TOP]
>UniRef100_B2J0J9 Peptide deformylase n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2J0J9_NOSP7
Length = 190
Score = 71.6 bits (174), Expect = 4e-11
Identities = 41/134 (30%), Positives = 70/134 (52%)
Frame = +1
Query: 163 LPDTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRII 342
L ++ G+P L + A ++ I+ + +QK+I+D+I + KA GVG+AAPQ+ R+
Sbjct: 18 LAPIIQLGNPTLRQKAVWVE--NIQDKHIQKLIEDLIATVAKANGVGIAAPQVAQSYRLF 75
Query: 343 VLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVE 522
++ A + + + + ++NPK+ S + +EGCLSV G R +V
Sbjct: 76 IV---------ASRPNARYPNAPEMEPTAMINPKIIAHSTEVVKDWEGCLSVPGIRGLVP 126
Query: 523 RYLDVEVTGLDSNG 564
RY +EV D G
Sbjct: 127 RYKSIEVEYTDCQG 140
[235][TOP]
>UniRef100_Q0FIY4 Peptide deformylase n=1 Tax=Roseovarius sp. HTCC2601
RepID=Q0FIY4_9RHOB
Length = 173
Score = 71.6 bits (174), Expect = 4e-11
Identities = 43/109 (39%), Positives = 63/109 (57%)
Frame = +1
Query: 238 SEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPF 417
S+K++ + DDM+ M APG+GLAAPQIG+ R+IVL+ K AP+
Sbjct: 24 SDKLRVLADDMLETMYDAPGIGLAAPQIGVLDRLIVLDCAKADDGEAPRP---------- 73
Query: 418 DLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
LV+ NP++ S++ ++ EGCLS+ A VER V+V LD +G
Sbjct: 74 --LVMFNPQVVASSDERNVYEEGCLSIPDQYAEVERPKVVDVEWLDRDG 120
[236][TOP]
>UniRef100_C8QVC3 Peptide deformylase n=1 Tax=Dickeya dadantii Ech586
RepID=C8QVC3_DICDA
Length = 169
Score = 71.6 bits (174), Expect = 4e-11
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Frame = +1
Query: 193 VLHEPAQEI----DPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTK 360
VLH P + + P + + ++Q+I+DDM M + G+GLAA Q+ I RIIV++ ++
Sbjct: 6 VLHFPDERLRTQAKPVKEVNAEIQRIVDDMFDTMYEEEGIGLAATQVDIHQRIIVIDVSE 65
Query: 361 EYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVE 540
E +D+R LV++NP+L KS T + EGCLS+ RA+V R V+
Sbjct: 66 E------------RDQR----LVLINPELLEKSGDTGI-EEGCLSIPETRALVPRAEHVK 108
Query: 541 VTGLDSNGAPIK 576
V LD G P +
Sbjct: 109 VRALDREGKPFE 120
[237][TOP]
>UniRef100_C6QBE7 Peptide deformylase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888
RepID=C6QBE7_9RHIZ
Length = 171
Score = 71.6 bits (174), Expect = 4e-11
Identities = 43/126 (34%), Positives = 66/126 (52%)
Frame = +1
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEY 366
DPVL + + DP E + V K++DDM+ M APG+GLAA Q+G+ R++V++
Sbjct: 11 DPVLRKIS---DPVERVDDAVVKLMDDMLETMYDAPGIGLAAVQVGVLKRVLVVD----- 62
Query: 367 ISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVT 546
A+D P + + + NP+L + T L EGCLS+ +ER V V
Sbjct: 63 ---------AAEDGAPHNPIAMANPELVALGSTTRLHEEGCLSIPDVHVEIERPASVTVR 113
Query: 547 GLDSNG 564
+D +G
Sbjct: 114 YIDRHG 119
[238][TOP]
>UniRef100_C4FHQ1 Peptide deformylase n=1 Tax=Sulfurihydrogenibium yellowstonense
SS-5 RepID=C4FHQ1_9AQUI
Length = 177
Score = 71.6 bits (174), Expect = 4e-11
Identities = 44/130 (33%), Positives = 70/130 (53%)
Frame = +1
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEY 366
DP+L EP +E+D E++Q+ I+ M M K GVGLAA QIGIP +I+V++ +
Sbjct: 10 DPILKEPTKEVD---FFDERLQEYINKMWEFMYKEEGVGLAANQIGIPYQILVIDTSL-- 64
Query: 367 ISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVT 546
+E ++ P +V++NPK+ K + EGCLS G + + R V+V
Sbjct: 65 -----RENRSEEETEPPVKMVLINPKIVEKEGEVQ-STEGCLSFPGVQITIPRAKRVKVV 118
Query: 547 GLDSNGAPIK 576
G + G ++
Sbjct: 119 GKNEKGEDVE 128
[239][TOP]
>UniRef100_C3XBJ7 Peptide deformylase n=1 Tax=Oxalobacter formigenes OXCC13
RepID=C3XBJ7_OXAFO
Length = 208
Score = 71.6 bits (174), Expect = 4e-11
Identities = 43/126 (34%), Positives = 71/126 (56%)
Frame = +1
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEY 366
DP L +P++ + + ++ +I DM + M +APGVGLAAPQI + ++IV++ +++
Sbjct: 40 DPRLLKPSRPVTDF---GDSLKSLIADMAQTMYEAPGVGLAAPQINVHKQLIVIDVSEQ- 95
Query: 367 ISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVT 546
K E++ V +NP++ S + A+F EGCLS+ G +ER V V
Sbjct: 96 -----KNELR----------VFINPQIVKASEEKAIFEEGCLSLPGIYDEIERPAKVTVR 140
Query: 547 GLDSNG 564
LD+NG
Sbjct: 141 ALDANG 146
[240][TOP]
>UniRef100_B9R1P6 Peptide deformylase n=1 Tax=Labrenzia alexandrii DFL-11
RepID=B9R1P6_9RHOB
Length = 189
Score = 71.6 bits (174), Expect = 4e-11
Identities = 49/142 (34%), Positives = 73/142 (51%), Gaps = 3/142 (2%)
Frame = +1
Query: 151 KKMNLPDTVKAGDPVLHE---PAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQI 321
++M + DPVL E P +++D I + DDM+ M APG+GLAA Q+
Sbjct: 16 RRMTKRPIITIPDPVLREVCAPIEKVDAETIA------LADDMLETMYDAPGIGLAASQV 69
Query: 322 GIPSRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVD 501
GI RI VL+ KE APKE +V +NP++ ++ +++ EGCLS+
Sbjct: 70 GILKRIFVLDVAKE---DAPKEP-----------MVFINPEIIWYGDELSVYQEGCLSIP 115
Query: 502 GFRAVVERYLDVEVTGLDSNGA 567
+ VER +V V +D GA
Sbjct: 116 DYYEDVERPAEVAVKFMDREGA 137
[241][TOP]
>UniRef100_A3JYF3 Peptide deformylase n=1 Tax=Sagittula stellata E-37
RepID=A3JYF3_9RHOB
Length = 175
Score = 71.6 bits (174), Expect = 4e-11
Identities = 44/109 (40%), Positives = 64/109 (58%)
Frame = +1
Query: 238 SEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPF 417
S+++ + DDM+ M APG+GLAAPQIG+ SR+IVL+ K +D RP
Sbjct: 24 SDELHVLADDMLETMYDAPGIGLAAPQIGVLSRLIVLDCAK---------SDNGEDARP- 73
Query: 418 DLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
LV+ NP++ S++ ++ EGCLS+ A VER V+V LD +G
Sbjct: 74 --LVMFNPRVIASSDEQNVYEEGCLSIPEQYAEVERPRVVDVEWLDRDG 120
[242][TOP]
>UniRef100_Q98D52 Peptide deformylase n=1 Tax=Mesorhizobium loti RepID=DEF_RHILO
Length = 176
Score = 71.6 bits (174), Expect = 4e-11
Identities = 44/126 (34%), Positives = 68/126 (53%)
Frame = +1
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEY 366
DP+L + ++ P E ++K+ DDM+ M APG+GLAA QIG P R++V++ KE
Sbjct: 11 DPILRQVSK---PVERVDAPLRKLADDMLATMYDAPGIGLAAIQIGEPLRMLVIDLAKED 67
Query: 367 ISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVT 546
+ AP V +NP++ + +++ EGCLS+ + A VER V V
Sbjct: 68 ETPAPH--------------VFINPEILESAEARSVYEEGCLSIPDYYAEVERPASVRVK 113
Query: 547 GLDSNG 564
LD +G
Sbjct: 114 YLDRDG 119
[243][TOP]
>UniRef100_UPI00016A5933 peptide deformylase n=1 Tax=Burkholderia ubonensis Bu
RepID=UPI00016A5933
Length = 176
Score = 71.2 bits (173), Expect = 5e-11
Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = +1
Query: 169 DTVKAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVL 348
+ +K GDP L E AQ ++ + + +++ DM M A G GLAAPQIG+ ++I+
Sbjct: 4 EILKMGDPRLLEIAQPVE--RFDTPALNELVADMFETMHHANGAGLAAPQIGVGLQVIIF 61
Query: 349 E--DTKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVE 522
+ Y P E V++NPK++ +EGCLSV G R VV
Sbjct: 62 GFGNNNRYPEAPPVPET-----------VLINPKVEFMPPDMEEGWEGCLSVPGMRGVVS 110
Query: 523 RYLDVEVTGLDSNGAPI 573
RY + +G D GA I
Sbjct: 111 RYAKIRYSGFDQFGAKI 127
[244][TOP]
>UniRef100_Q21RP4 Peptide deformylase n=1 Tax=Rhodoferax ferrireducens T118
RepID=Q21RP4_RHOFD
Length = 169
Score = 71.2 bits (173), Expect = 5e-11
Identities = 49/126 (38%), Positives = 69/126 (54%)
Frame = +1
Query: 187 DPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEY 366
DP LH A+ + +++ VQ +I DM+ M +A G+GLAA QI + R+IV++ ++E
Sbjct: 11 DPKLHTVAKPVSTVDVR---VQTLIVDMLETMYEAKGIGLAATQINVHERLIVVDVSEE- 66
Query: 367 ISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVT 546
AP LV++NP+L S +T L EGCLSV G VER+ V VT
Sbjct: 67 -RDAP--------------LVLINPQLVWSSAETHLNEEGCLSVPGIYDGVERFDAVTVT 111
Query: 547 GLDSNG 564
LD G
Sbjct: 112 ALDGQG 117
[245][TOP]
>UniRef100_Q9JN24 Peptide deformylase n=1 Tax=Escherichia coli RepID=Q9JN24_ECOLX
Length = 150
Score = 71.2 bits (173), Expect = 5e-11
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Frame = +1
Query: 193 VLHEPAQEI----DPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTK 360
VLH P + + P E + ++Q+I+DDM M G+GLAA Q+ I RIIV++ ++
Sbjct: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEKGIGLAATQVDIHQRIIVIDVSE 65
Query: 361 EYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVE 540
+D R LV++NP+L KS +T + EGCLS+ RA+V R V+
Sbjct: 66 N------------RDER----LVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVK 108
Query: 541 VTGLDSNGAPIK 576
+ LD +G P +
Sbjct: 109 IRALDRDGKPFE 120
[246][TOP]
>UniRef100_C7XP89 Peptide deformylase n=1 Tax=Fusobacterium sp. 3_1_36A2
RepID=C7XP89_9FUSO
Length = 174
Score = 71.2 bits (173), Expect = 5e-11
Identities = 47/133 (35%), Positives = 68/133 (51%)
Frame = +1
Query: 178 KAGDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDT 357
K G+ VL + A+E++ +EI E +K +DDM+ M + GVGLAAPQIG+ RI V +D
Sbjct: 7 KYGEDVLKQIAKEVELNEINDE-FRKFLDDMVETMYETDGVGLAAPQIGVSKRIFVCDDG 65
Query: 358 KEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDV 537
+ ++NP + + +T F EGCLSV G VER V
Sbjct: 66 NGVVR------------------KVINPIVVPLTEETQEFEEGCLSVPGIYKKVERPKRV 107
Query: 538 EVTGLDSNGAPIK 576
+ L+ NG I+
Sbjct: 108 LLKYLNENGEEIE 120
[247][TOP]
>UniRef100_C7JBU3 Peptide deformylase n=8 Tax=Acetobacter pasteurianus
RepID=C7JBU3_ACEP3
Length = 174
Score = 71.2 bits (173), Expect = 5e-11
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Frame = +1
Query: 178 KAGDPVLHEPAQEI-DPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLED 354
+ G PVL +PAQE+ DP+ + +Q++I DM + ++ GVGLAAPQ+ + R+
Sbjct: 8 RMGHPVLRQPAQEVPDPT---APDIQRLIADMRETLEESGGVGLAAPQVFVSQRL----- 59
Query: 355 TKEYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLD 534
++ P + +D + ++NP LK ++ L EGCLS+ R V RY
Sbjct: 60 ---FLYSVPLARSEGEDDPSLPVQALINPVLKPVDDEKLLRTEGCLSLPDLRGEVPRYKR 116
Query: 535 VEVTGLDSNGAPIK 576
+ G D +G ++
Sbjct: 117 IWYAGFDPHGQKVE 130
[248][TOP]
>UniRef100_C0VAX0 Peptide deformylase n=1 Tax=Xylanimonas cellulosilytica DSM 15894
RepID=C0VAX0_9MICO
Length = 210
Score = 71.2 bits (173), Expect = 5e-11
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Frame = +1
Query: 184 GDPVLHEPAQEIDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKE 363
G+PVLH PA+ + +E+ + ++ ++IDDM M A GVGLAAPQ+G+ R+ V + T +
Sbjct: 23 GEPVLHTPARPV--TELGTPELARLIDDMFTTMDVAEGVGLAAPQVGVDLRVFVYDLTDD 80
Query: 364 YISYAPKEEIKAQDRRPFDLLVIVNPKLK-NKSNKTALFFEGCLSVDGFRAVVERYLDVE 540
A DR + +VNP+L+ + + EGCLSV G A +ER
Sbjct: 81 -----------AGDRH---VGAVVNPELELDLDADPEVEDEGCLSVPGAYAPLERPGGAT 126
Query: 541 VTGLDSNGAPIK 576
+ G+D G P++
Sbjct: 127 IRGVDQLGGPVQ 138
[249][TOP]
>UniRef100_B6BDW9 Peptide deformylase n=1 Tax=Rhodobacterales bacterium Y4I
RepID=B6BDW9_9RHOB
Length = 182
Score = 71.2 bits (173), Expect = 5e-11
Identities = 45/109 (41%), Positives = 64/109 (58%)
Frame = +1
Query: 238 SEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEEIKAQDRRPF 417
S+ ++ + DDM+ M APG+GLAAPQIGI R+IVL+ KE + D RP
Sbjct: 34 SDDLRVLADDMLETMYAAPGIGLAAPQIGILQRLIVLDCVKE----------EDGDPRP- 82
Query: 418 DLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDSNG 564
LV+ NP++ S++T ++ EGCLS+ A V R VEV +D +G
Sbjct: 83 --LVMFNPEIIASSDETNVYEEGCLSIPDQYAEVTRPKVVEVEWMDRSG 129
[250][TOP]
>UniRef100_C3SRA5 Peptide deformylase n=2 Tax=Escherichia coli RepID=C3SRA5_ECOLX
Length = 169
Score = 71.2 bits (173), Expect = 5e-11
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Frame = +1
Query: 193 VLHEPAQEI----DPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTK 360
VLH P + + P E + ++Q+I+DDM M G+GLAA Q+ I RIIV++ ++
Sbjct: 6 VLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE 65
Query: 361 EYISYAPKEEIKAQDRRPFDLLVIVNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVE 540
+D R LV++NP+L KS +T + EGCLS+ RA+V R V+
Sbjct: 66 N------------RDER----LVLINPELLEKSGETGI-EEGCLSIPEQRALVPRAEKVK 108
Query: 541 VTGLDSNGAPIK 576
+ LD +G P +
Sbjct: 109 IRALDRDGKPFE 120