[UP]
[1][TOP]
>UniRef100_B5LMQ5 RNA polymerase alpha subunit n=1 Tax=Cicer arietinum
RepID=B5LMQ5_CICAR
Length = 333
Score = 124 bits (311), Expect = 5e-27
Identities = 60/66 (90%), Positives = 65/66 (98%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LKSIFIDQLELPPRIYNCLKKS+IHTLLELLNKSQE+LMKIEHFRVEDV+NILN+LQ
Sbjct: 268 EIALKSIFIDQLELPPRIYNCLKKSNIHTLLELLNKSQEELMKIEHFRVEDVKNILNLLQ 327
Query: 395 IDKHFA 378
I+KHFA
Sbjct: 328 IEKHFA 333
[2][TOP]
>UniRef100_UPI0001596B8A RNA polymerase alpha subunit n=1 Tax=Medicago truncatula
RepID=UPI0001596B8A
Length = 333
Score = 123 bits (309), Expect = 9e-27
Identities = 61/66 (92%), Positives = 64/66 (96%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LKSIFIDQLEL PRIYNCLKKS+IHTLLELLNKSQEDLMKIEHFRVEDV+NILNILQ
Sbjct: 268 EIALKSIFIDQLELSPRIYNCLKKSNIHTLLELLNKSQEDLMKIEHFRVEDVKNILNILQ 327
Query: 395 IDKHFA 378
I+KHFA
Sbjct: 328 IEKHFA 333
[3][TOP]
>UniRef100_B8R4C0 RNA polymerase alpha subunit n=1 Tax=Trifolium subterraneum
RepID=B8R4C0_TRISU
Length = 337
Score = 117 bits (293), Expect = 6e-25
Identities = 57/66 (86%), Positives = 62/66 (93%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I LKS+FIDQLELPPRIYNCLKKSDIHTL +LLNKSQEDLMKIE F VEDV+NILNILQ
Sbjct: 270 QIELKSVFIDQLELPPRIYNCLKKSDIHTLYQLLNKSQEDLMKIEDFSVEDVKNILNILQ 329
Query: 395 IDKHFA 378
ID+HFA
Sbjct: 330 IDQHFA 335
[4][TOP]
>UniRef100_P13911 DNA-directed RNA polymerase subunit alpha n=1 Tax=Pisum sativum
RepID=RPOA_PEA
Length = 334
Score = 116 bits (291), Expect = 1e-24
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LKSIFIDQLELPPRIYNCLKKS+IHT+LELLNKSQEDLMKIEHFRVED++ ILNILQ
Sbjct: 269 EITLKSIFIDQLELPPRIYNCLKKSNIHTVLELLNKSQEDLMKIEHFRVEDLKFILNILQ 328
Query: 395 IDKHF 381
I+ HF
Sbjct: 329 IENHF 333
[5][TOP]
>UniRef100_Q2PMQ3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Glycine max
RepID=RPOA_SOYBN
Length = 333
Score = 114 bits (286), Expect = 4e-24
Identities = 55/66 (83%), Positives = 62/66 (93%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LKSIFIDQLELPPRIYNCLK+S+IHTLLELLN SQEDL+KIEHFRVEDV+ IL+ L+
Sbjct: 268 EIALKSIFIDQLELPPRIYNCLKRSNIHTLLELLNNSQEDLLKIEHFRVEDVKYILDFLE 327
Query: 395 IDKHFA 378
I+KHFA
Sbjct: 328 IEKHFA 333
[6][TOP]
>UniRef100_Q9BBQ4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lotus japonicus
RepID=RPOA_LOTJA
Length = 333
Score = 113 bits (283), Expect = 9e-24
Identities = 54/65 (83%), Positives = 62/65 (95%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI KSIFIDQLELPP+IYNCLKKS+IHTLLELL KS+EDLMKIEHFRVEDV++IL+IL+
Sbjct: 268 EIAFKSIFIDQLELPPKIYNCLKKSNIHTLLELLTKSKEDLMKIEHFRVEDVKHILDILE 327
Query: 395 IDKHF 381
I+KHF
Sbjct: 328 IEKHF 332
[7][TOP]
>UniRef100_Q8MC99 DNA-directed RNA polymerase subunit alpha n=1 Tax=Vigna angularis
RepID=RPOA_PHAAN
Length = 333
Score = 107 bits (266), Expect = 9e-22
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LKSIFIDQLELPPRIYNCLK+S+IHTLLELLN SQE L+KIEHFRVED ++IL+IL+
Sbjct: 268 EIALKSIFIDQLELPPRIYNCLKRSNIHTLLELLNNSQEXLLKIEHFRVEDGKSILDILK 327
Query: 395 IDKHF 381
I K+F
Sbjct: 328 IQKYF 332
[8][TOP]
>UniRef100_A4GGD7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Phaseolus
vulgaris RepID=RPOA_PHAVU
Length = 333
Score = 105 bits (263), Expect = 2e-21
Identities = 51/66 (77%), Positives = 60/66 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LKSIFIDQLELPPRIYNCLK+S+IHTLLELL+ SQEDL+K EHF VED ++IL+IL+
Sbjct: 268 EIALKSIFIDQLELPPRIYNCLKRSNIHTLLELLSNSQEDLLKFEHFHVEDGKSILDILK 327
Query: 395 IDKHFA 378
I K+FA
Sbjct: 328 IQKYFA 333
[9][TOP]
>UniRef100_A4GYU3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Populus
trichocarpa RepID=RPOA_POPTR
Length = 339
Score = 104 bits (259), Expect = 6e-21
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LKSIFIDQLEL P+IYNCLK+S+IHTL +LL SQEDLMKIEHFR+EDV++I IL+
Sbjct: 266 EIALKSIFIDQLELAPKIYNCLKRSNIHTLWDLLKNSQEDLMKIEHFRIEDVKHIFGILK 325
Query: 395 IDKHF 381
I+KHF
Sbjct: 326 IEKHF 330
[10][TOP]
>UniRef100_Q14FC5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Populus alba
RepID=RPOA_POPAL
Length = 339
Score = 104 bits (259), Expect = 6e-21
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LKSIFIDQLEL P+IYNCLK+S+IHTL +LL SQEDLMKIEHFR+EDV++I IL+
Sbjct: 266 EIALKSIFIDQLELAPKIYNCLKRSNIHTLWDLLKNSQEDLMKIEHFRIEDVKHIFGILK 325
Query: 395 IDKHF 381
I+KHF
Sbjct: 326 IEKHF 330
[11][TOP]
>UniRef100_B1NWI2 RNA polymerase alpha subunit n=1 Tax=Manihot esculenta
RepID=B1NWI2_MANES
Length = 343
Score = 103 bits (257), Expect = 9e-21
Identities = 49/65 (75%), Positives = 59/65 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQ EL P+IYNCLK+S+IHTL +LLNKSQEDLMKIEHFR++DV++IL IL+
Sbjct: 270 EIVLKYIFIDQSELTPKIYNCLKRSNIHTLSDLLNKSQEDLMKIEHFRIDDVKHILGILE 329
Query: 395 IDKHF 381
I+KHF
Sbjct: 330 IEKHF 334
[12][TOP]
>UniRef100_B0Z4Q8 RNA polymerase alpha subunit n=2 Tax=Oenothera RepID=B0Z4Q8_OENAR
Length = 366
Score = 102 bits (253), Expect = 3e-20
Identities = 50/65 (76%), Positives = 58/65 (89%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LKSIFIDQLELPPRIYN LK S IHTL +LLNKSQEDLMK++HFR+EDV+ IL+IL+
Sbjct: 266 EIALKSIFIDQLELPPRIYNSLKGSKIHTLSDLLNKSQEDLMKMKHFRIEDVKQILDILE 325
Query: 395 IDKHF 381
I+K F
Sbjct: 326 IEKAF 330
[13][TOP]
>UniRef100_Q9MTJ3 DNA-directed RNA polymerase subunit alpha n=3 Tax=Oenothera
RepID=RPOA_OENEH
Length = 366
Score = 102 bits (253), Expect = 3e-20
Identities = 50/65 (76%), Positives = 58/65 (89%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LKSIFIDQLELPPRIYN LK S IHTL +LLNKSQEDLMK++HFR+EDV+ IL+IL+
Sbjct: 266 EIALKSIFIDQLELPPRIYNSLKGSKIHTLSDLLNKSQEDLMKMKHFRIEDVKQILDILE 325
Query: 395 IDKHF 381
I+K F
Sbjct: 326 IEKAF 330
[14][TOP]
>UniRef100_C0LEA6 RpoA n=1 Tax=Jatropha curcas RepID=C0LEA6_9ROSI
Length = 339
Score = 101 bits (252), Expect = 4e-20
Identities = 48/66 (72%), Positives = 59/66 (89%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQ EL P+ YNCLK+S+IHTL +LLNKSQEDLMKIE+FR++DV++IL IL+
Sbjct: 266 EIALKYIFIDQSELTPKTYNCLKRSNIHTLSDLLNKSQEDLMKIENFRIDDVKHILGILE 325
Query: 395 IDKHFA 378
I+KHFA
Sbjct: 326 IEKHFA 331
[15][TOP]
>UniRef100_A1XGS0 DNA-directed RNA polymerase subunit alpha n=2 Tax=Ranunculus
macranthus RepID=RPOA_RANMC
Length = 346
Score = 101 bits (252), Expect = 4e-20
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQ ELP R YNCLK+++IHTLL+LLNKSQEDLMKIEHFR+EDV+ IL+I+Q
Sbjct: 267 EIELKCIFIDQSELPSRTYNCLKRANIHTLLDLLNKSQEDLMKIEHFRIEDVKQILDIIQ 326
Query: 395 IDKHFA*ICNPLDFFFI 345
KHF I P + F I
Sbjct: 327 --KHFVVIDLPKNKFLI 341
[16][TOP]
>UniRef100_A7Y3I1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Ipomoea purpurea
RepID=RPOA_IPOPU
Length = 337
Score = 101 bits (252), Expect = 4e-20
Identities = 50/66 (75%), Positives = 58/66 (87%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ LKSIFIDQLE PP+IYNCLKKS+I TLL+LLNKSQEDLMKIEHF +EDV+ IL IL
Sbjct: 266 KLALKSIFIDQLEFPPKIYNCLKKSNISTLLDLLNKSQEDLMKIEHFHIEDVKQILGIL- 324
Query: 395 IDKHFA 378
+KHFA
Sbjct: 325 -EKHFA 329
[17][TOP]
>UniRef100_A6MM68 DNA-directed RNA polymerase subunit alpha n=1 Tax=Buxus microphylla
RepID=RPOA_BUXMI
Length = 337
Score = 100 bits (250), Expect = 6e-20
Identities = 50/66 (75%), Positives = 56/66 (84%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI + IFIDQ ELPPR YNCLK+S+IHTLL+LLN SQEDLMKIEHFR+EDV+ IL ILQ
Sbjct: 266 EISFQCIFIDQSELPPRTYNCLKRSNIHTLLDLLNNSQEDLMKIEHFRIEDVKQILGILQ 325
Query: 395 IDKHFA 378
KHFA
Sbjct: 326 --KHFA 329
[18][TOP]
>UniRef100_Q0ZIY7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Vitis vinifera
RepID=RPOA_VITVI
Length = 331
Score = 100 bits (249), Expect = 8e-20
Identities = 50/65 (76%), Positives = 58/65 (89%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQLELPPRIYNCLK+S+IHTLL+LLNKSQ+DLMKIE FR+EDV+ +L IL
Sbjct: 266 EIELKYIFIDQLELPPRIYNCLKRSNIHTLLDLLNKSQKDLMKIEDFRIEDVKQLLGIL- 324
Query: 395 IDKHF 381
+KHF
Sbjct: 325 -EKHF 328
[19][TOP]
>UniRef100_B1A967 RNA polymerase alpha chain n=1 Tax=Carica papaya RepID=B1A967_CARPA
Length = 327
Score = 100 bits (248), Expect = 1e-19
Identities = 48/60 (80%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI + IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDLMKIEHFR EDV+ IL+IL+
Sbjct: 266 EIAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLMKIEHFRTEDVKQILSILE 325
[20][TOP]
>UniRef100_Q2L938 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gossypium
hirsutum RepID=RPOA_GOSHI
Length = 329
Score = 100 bits (248), Expect = 1e-19
Identities = 48/60 (80%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQ ELPPRIYNCLKKS+IHTLL+LLN S+EDLMKIEHFR+EDV+ IL IL+
Sbjct: 268 EIALKYIFIDQSELPPRIYNCLKKSNIHTLLDLLNNSREDLMKIEHFRIEDVKQILGILE 327
[21][TOP]
>UniRef100_Q49KW6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Eucalyptus
globulus subsp. globulus RepID=RPOA_EUCGG
Length = 337
Score = 100 bits (248), Expect = 1e-19
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LKSIFIDQ ELPPR YNCLK+ +IHTL +LLNKSQEDLMK+E+FR+EDV+ IL+ L+
Sbjct: 266 EIALKSIFIDQFELPPRTYNCLKRYNIHTLFDLLNKSQEDLMKMEYFRIEDVKQILDSLE 325
Query: 395 IDKHF 381
I+K F
Sbjct: 326 IEKAF 330
[22][TOP]
>UniRef100_A9QAY1 RNA polymerase alpha subunit (Fragment) n=1 Tax=Anethum graveolens
RepID=A9QAY1_9APIA
Length = 338
Score = 99.8 bits (247), Expect = 1e-19
Identities = 49/66 (74%), Positives = 58/66 (87%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I LKSIFIDQ ELPPRIYNCLK+S+I+TLL+LLN SQEDLMKIEHFR+ DV+ IL IL
Sbjct: 269 KIALKSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQEDLMKIEHFRINDVKQILGIL- 327
Query: 395 IDKHFA 378
+KHF+
Sbjct: 328 -EKHFS 332
[23][TOP]
>UniRef100_Q68RX5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Panax ginseng
RepID=RPOA_PANGI
Length = 353
Score = 99.0 bits (245), Expect = 2e-19
Identities = 50/66 (75%), Positives = 58/66 (87%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I LKSIFIDQ ELPPRIYNCL +S+I+TLL+LLN SQEDLMKIEHFR+EDV+ IL IL
Sbjct: 267 KIALKSIFIDQSELPPRIYNCLIRSNIYTLLDLLNNSQEDLMKIEHFRIEDVKAILGIL- 325
Query: 395 IDKHFA 378
+KHFA
Sbjct: 326 -EKHFA 330
[24][TOP]
>UniRef100_Q6EW20 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nymphaea alba
RepID=RPOA_NYMAL
Length = 341
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/60 (80%), Positives = 55/60 (91%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQLELPPR YNCLK+S+IHTLL+LL+KSQEDLM+IEHFRVEDV+ I +ILQ
Sbjct: 265 EIILKRIFIDQLELPPRTYNCLKRSNIHTLLDLLSKSQEDLMRIEHFRVEDVKQIFDILQ 324
[25][TOP]
>UniRef100_A0ZZ67 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gossypium
barbadense RepID=RPOA_GOSBA
Length = 330
Score = 99.0 bits (245), Expect = 2e-19
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQ ELPPRIYNCLKKS+IHTLL+LLN S+EDLMK+EHFR+EDV+ IL IL+
Sbjct: 269 EIALKYIFIDQSELPPRIYNCLKKSNIHTLLDLLNNSREDLMKMEHFRIEDVKQILGILE 328
[26][TOP]
>UniRef100_B2XWQ5 RNA polymerase alpha subunit n=1 Tax=Fagopyrum esculentum subsp.
ancestrale RepID=B2XWQ5_FAGEA
Length = 337
Score = 98.6 bits (244), Expect = 3e-19
Identities = 48/66 (72%), Positives = 57/66 (86%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I LKSIFIDQLELPPRIYNCLK S+IHTLL+LL SQ+D+MKIEHF +EDV+ IL+ L
Sbjct: 266 KIALKSIFIDQLELPPRIYNCLKNSNIHTLLDLLTNSQDDIMKIEHFSIEDVKQILDTL- 324
Query: 395 IDKHFA 378
+KHFA
Sbjct: 325 -EKHFA 329
[27][TOP]
>UniRef100_Q4VZK3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cucumis sativus
RepID=RPOA_CUCSA
Length = 333
Score = 98.6 bits (244), Expect = 3e-19
Identities = 45/66 (68%), Positives = 59/66 (89%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQ ELPPRIYNCLK+ +IHTL +LLN S ++LMKI+HFR+EDV++IL+IL+
Sbjct: 268 EIALKYIFIDQSELPPRIYNCLKRCNIHTLFDLLNNSPDELMKIKHFRIEDVKHILDILE 327
Query: 395 IDKHFA 378
++K+FA
Sbjct: 328 MEKNFA 333
[28][TOP]
>UniRef100_A9QC95 RNA polymerase alpha subunit (Fragment) n=1 Tax=Trachelium
caeruleum RepID=A9QC95_TRACE
Length = 337
Score = 98.2 bits (243), Expect = 4e-19
Identities = 46/60 (76%), Positives = 56/60 (93%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I LKSIFIDQ ELPPR+YNCLK+S+I+TLL+LLN SQEDLMKIEHFRVED++ IL+IL+
Sbjct: 264 KISLKSIFIDQSELPPRVYNCLKRSNIYTLLDLLNNSQEDLMKIEHFRVEDLKRILDILE 323
[29][TOP]
>UniRef100_Q7YJU6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Calycanthus
floridus var. glaucus RepID=RPOA_CALFG
Length = 340
Score = 98.2 bits (243), Expect = 4e-19
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQ ELP R YNCLK+S+IHTLL+LLN SQEDLM+IEHFR+ED++ IL+ILQ
Sbjct: 268 EIALKCIFIDQSELPTRTYNCLKRSNIHTLLDLLNNSQEDLMRIEHFRIEDIKQILDILQ 327
Query: 395 IDKHF 381
KHF
Sbjct: 328 --KHF 330
[30][TOP]
>UniRef100_Q3V502 DNA-directed RNA polymerase subunit alpha n=2 Tax=Acorus
RepID=RPOA_ACOCL
Length = 337
Score = 98.2 bits (243), Expect = 4e-19
Identities = 49/66 (74%), Positives = 57/66 (86%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQ ELPPR YNCLK+S+IHTLL+LL+ SQEDLMKIE+FR+EDV+ IL+ LQ
Sbjct: 266 EIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMKIEYFRIEDVKQILDTLQ 325
Query: 395 IDKHFA 378
KHFA
Sbjct: 326 --KHFA 329
[31][TOP]
>UniRef100_B2LMM5 RNA polymerase alpha subunit n=1 Tax=Guizotia abyssinica
RepID=B2LMM5_GUIAB
Length = 335
Score = 97.8 bits (242), Expect = 5e-19
Identities = 46/60 (76%), Positives = 55/60 (91%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ LKSIFIDQ ELPPRIYNCLK+S+I+TLL+LLN SQEDLMKIEHFR+EDV+ IL IL+
Sbjct: 264 KMALKSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQEDLMKIEHFRIEDVKQILGILE 323
[32][TOP]
>UniRef100_Q0G9I7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Liriodendron
tulipifera RepID=RPOA_LIRTU
Length = 337
Score = 97.8 bits (242), Expect = 5e-19
Identities = 48/64 (75%), Positives = 56/64 (87%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
I LK IFIDQ ELPPR YNCLK+S+IHTLL+LL+ SQEDLM+IEHFR+EDV+ IL+ILQ
Sbjct: 267 IALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIEHFRIEDVKQILDILQ- 325
Query: 392 DKHF 381
KHF
Sbjct: 326 -KHF 328
[33][TOP]
>UniRef100_A4QK50 DNA-directed RNA polymerase subunit alpha n=1 Tax=Arabis hirsuta
RepID=RPOA_ARAHI
Length = 337
Score = 97.8 bits (242), Expect = 5e-19
Identities = 48/67 (71%), Positives = 58/67 (86%), Gaps = 2/67 (2%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ + IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDL+KIEHF +EDV+ IL+IL+
Sbjct: 266 ELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKIEHFHIEDVKKILDILE 325
Query: 395 --IDKHF 381
I+K F
Sbjct: 326 KKIEKAF 332
[34][TOP]
>UniRef100_A4QJN1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aethionema
grandiflorum RepID=RPOA_AETGR
Length = 333
Score = 97.8 bits (242), Expect = 5e-19
Identities = 46/65 (70%), Positives = 57/65 (87%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ + IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDL+KIEHF +EDV+ IL+IL+
Sbjct: 266 ELVFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKIEHFHIEDVKKILDILE 325
Query: 395 IDKHF 381
++ F
Sbjct: 326 KNRKF 330
[35][TOP]
>UniRef100_A4QKW3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Crucihimalaya
wallichii RepID=RPOA_CRUWA
Length = 327
Score = 97.4 bits (241), Expect = 7e-19
Identities = 46/60 (76%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ + IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDL+KIEHF VEDV+ IL+IL+
Sbjct: 266 ELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKIEHFHVEDVKKILDILE 325
[36][TOP]
>UniRef100_A4QKM4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Capsella
bursa-pastoris RepID=RPOA_CAPBU
Length = 327
Score = 97.4 bits (241), Expect = 7e-19
Identities = 46/60 (76%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ + IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDL+KIEHF VEDV+ IL+IL+
Sbjct: 266 ELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKIEHFHVEDVKKILDILE 325
[37][TOP]
>UniRef100_A4QKD7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Barbarea verna
RepID=RPOA_BARVE
Length = 327
Score = 97.4 bits (241), Expect = 7e-19
Identities = 46/60 (76%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E G + IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDL+KIEHF +EDV+ IL+IL+
Sbjct: 266 EQGFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKIEHFHIEDVKKILDILE 325
[38][TOP]
>UniRef100_P56762 DNA-directed RNA polymerase subunit alpha n=1 Tax=Arabidopsis
thaliana RepID=RPOA_ARATH
Length = 329
Score = 97.4 bits (241), Expect = 7e-19
Identities = 46/60 (76%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ + IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDL+KIEHF VEDV+ IL+IL+
Sbjct: 268 ELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKIEHFHVEDVKKILDILE 327
[39][TOP]
>UniRef100_A4QJE7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aethionema
cordifolium RepID=RPOA_AETCO
Length = 333
Score = 97.4 bits (241), Expect = 7e-19
Identities = 46/65 (70%), Positives = 56/65 (86%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ + IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDL+KIEHF +EDV+ IL IL+
Sbjct: 266 ELVFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKIEHFHIEDVKKILEILE 325
Query: 395 IDKHF 381
++ F
Sbjct: 326 KNRKF 330
[40][TOP]
>UniRef100_Q4FGA2 RNA polymerase alpha chain (Fragment) n=1 Tax=Nuphar advena
RepID=Q4FGA2_NUPAD
Length = 336
Score = 97.1 bits (240), Expect = 9e-19
Identities = 48/60 (80%), Positives = 53/60 (88%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQ ELPPR YNCLKKS+IHTLL LL+KSQEDLM+IEHFRVEDV+ I +ILQ
Sbjct: 263 EIILKRIFIDQSELPPRTYNCLKKSNIHTLLNLLSKSQEDLMRIEHFRVEDVKQIFDILQ 322
[41][TOP]
>UniRef100_P06505 DNA-directed RNA polymerase subunit alpha n=1 Tax=Spinacia oleracea
RepID=RPOA_SPIOL
Length = 335
Score = 97.1 bits (240), Expect = 9e-19
Identities = 47/65 (72%), Positives = 56/65 (86%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I LK IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDL+K++HFR+EDV+ I L
Sbjct: 265 KIALKFIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKMKHFRIEDVKQIFGTL- 323
Query: 395 IDKHF 381
+KHF
Sbjct: 324 -EKHF 327
[42][TOP]
>UniRef100_Q09G14 DNA-directed RNA polymerase subunit alpha n=1 Tax=Platanus
occidentalis RepID=RPOA_PLAOC
Length = 337
Score = 97.1 bits (240), Expect = 9e-19
Identities = 49/65 (75%), Positives = 54/65 (83%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQ ELPPR YNCLK+S+IHTLL+L N SQEDLMKIE FR+EDV+ IL ILQ
Sbjct: 266 EIALKYIFIDQSELPPRTYNCLKRSNIHTLLDLFNNSQEDLMKIEDFRIEDVKQILGILQ 325
Query: 395 IDKHF 381
KHF
Sbjct: 326 --KHF 328
[43][TOP]
>UniRef100_A4QJW3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Olimarabidopsis
pumila RepID=RPOA_OLIPU
Length = 327
Score = 97.1 bits (240), Expect = 9e-19
Identities = 45/60 (75%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ + IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDL+KIEHF +EDV+ IL+IL+
Sbjct: 266 ELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKIEHFHIEDVKKILDILE 325
[44][TOP]
>UniRef100_A4QLW5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nasturtium
officinale RepID=RPOA_NASOF
Length = 327
Score = 97.1 bits (240), Expect = 9e-19
Identities = 45/60 (75%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ + IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDL+KIEHF +EDV+ IL+IL+
Sbjct: 266 ELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKIEHFHIEDVKKILDILE 325
[45][TOP]
>UniRef100_A4QLD8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lepidium
virginicum RepID=RPOA_LEPVR
Length = 327
Score = 97.1 bits (240), Expect = 9e-19
Identities = 45/60 (75%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ + IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDL+KIEHF +EDV+ IL+IL+
Sbjct: 266 ELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKIEHFHIEDVKKILDILE 325
[46][TOP]
>UniRef100_A4QL51 DNA-directed RNA polymerase subunit alpha n=1 Tax=Draba nemorosa
RepID=RPOA_DRANE
Length = 327
Score = 97.1 bits (240), Expect = 9e-19
Identities = 45/60 (75%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ + IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDL+KIEHF +EDV+ IL+IL+
Sbjct: 266 ELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKIEHFHIEDVKKILDILE 325
[47][TOP]
>UniRef100_B0FIU7 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta
lupuliformis RepID=B0FIU7_9ASTE
Length = 335
Score = 96.7 bits (239), Expect = 1e-18
Identities = 48/66 (72%), Positives = 56/66 (84%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ L+S+FIDQLE PP IYNCLKKS+I TLL+LLN SQEDLMKIEHFR+EDV+ IL IL
Sbjct: 264 KLALESLFIDQLEFPPNIYNCLKKSNIFTLLDLLNNSQEDLMKIEHFRLEDVKQILGIL- 322
Query: 395 IDKHFA 378
KHFA
Sbjct: 323 -GKHFA 327
[48][TOP]
>UniRef100_Q332U5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lactuca sativa
RepID=RPOA_LACSA
Length = 335
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/60 (75%), Positives = 55/60 (91%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ LKSIFIDQ ELPPRIYNCLK+S+I+TLL+LLN SQEDLMK+EHFR+EDV+ IL IL+
Sbjct: 264 KMALKSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQEDLMKMEHFRIEDVKQILGILE 323
[49][TOP]
>UniRef100_Q1KXS7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Helianthus annuus
RepID=RPOA_HELAN
Length = 335
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/60 (75%), Positives = 55/60 (91%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ LKSIFIDQ ELPPRIYNCLK+S+I+TLL+LLN SQEDLMK+EHFR+EDV+ IL IL+
Sbjct: 264 KMALKSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQEDLMKMEHFRIEDVKQILGILE 323
[50][TOP]
>UniRef100_A0A367 DNA-directed RNA polymerase subunit alpha n=1 Tax=Coffea arabica
RepID=RPOA_COFAR
Length = 335
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/60 (76%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LKSIFIDQ ELPPRIYNCLK+S+I+TLL+LLN SQE+LMKIEHF +EDV+ IL IL+
Sbjct: 266 EIALKSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQENLMKIEHFHIEDVKEILGILE 325
[51][TOP]
>UniRef100_Q5QA74 DNA-directed RNA polymerase subunit alpha n=1 Tax=Acorus gramineus
RepID=RPOA_ACOGR
Length = 337
Score = 96.7 bits (239), Expect = 1e-18
Identities = 48/66 (72%), Positives = 57/66 (86%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQ ELPPR YNCLK+S+IHTLL+LL+ SQEDLMKIE+FR+EDV+ IL+ L+
Sbjct: 266 EIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMKIEYFRIEDVKQILDTLR 325
Query: 395 IDKHFA 378
KHFA
Sbjct: 326 --KHFA 329
[52][TOP]
>UniRef100_A4QLM6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lobularia
maritima RepID=RPOA_LOBMA
Length = 327
Score = 96.3 bits (238), Expect = 2e-18
Identities = 45/60 (75%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ + IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDL+KIEHF +EDV+ IL+IL+
Sbjct: 266 ELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKIEHFHMEDVKKILDILE 325
[53][TOP]
>UniRef100_Q09ME5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Citrus sinensis
RepID=RPOA_CITSI
Length = 328
Score = 95.9 bits (237), Expect = 2e-18
Identities = 45/60 (75%), Positives = 53/60 (88%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LKSIFIDQ E+ PRIYNCLKKS+IHTL +LLN QEDLMKIEHFR+EDV+ I++IL+
Sbjct: 267 EIALKSIFIDQSEMSPRIYNCLKKSNIHTLFDLLNTRQEDLMKIEHFRIEDVKQIMSILE 326
[54][TOP]
>UniRef100_Q4FG99 RNA polymerase alpha chain (Fragment) n=1 Tax=Yucca schidigera
RepID=Q4FG99_9ASPA
Length = 337
Score = 95.5 bits (236), Expect = 3e-18
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
I LK IFIDQLELPPR YNCLK+S+IHTLL+LL+ SQEDLM+IE+FR EDV+ IL+ LQ
Sbjct: 265 IPLKCIFIDQLELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIEYFRTEDVKQILDTLQ- 323
Query: 392 DKHFA 378
KHFA
Sbjct: 324 -KHFA 327
[55][TOP]
>UniRef100_Q09FS9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nandina domestica
RepID=RPOA_NANDO
Length = 338
Score = 95.5 bits (236), Expect = 3e-18
Identities = 46/60 (76%), Positives = 53/60 (88%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQ ELP R YNCLKKS+I+TLL+LLNKSQEDL+KIEHFR+EDV+ +L ILQ
Sbjct: 265 EIALKFIFIDQSELPSRTYNCLKKSNINTLLDLLNKSQEDLLKIEHFRIEDVKRVLGILQ 324
[56][TOP]
>UniRef100_Q0G9T0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Daucus carota
RepID=RPOA_DAUCA
Length = 353
Score = 95.5 bits (236), Expect = 3e-18
Identities = 45/57 (78%), Positives = 53/57 (92%)
Frame = -3
Query: 566 LKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
LKSIFIDQ ELPPRIYNCLK+S+I+TLL+LLN SQEDLMKIEHFR++DV+ IL IL+
Sbjct: 270 LKSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQEDLMKIEHFRIKDVKQILGILE 326
[57][TOP]
>UniRef100_A8W3F3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cuscuta exaltata
RepID=RPOA_CUSEX
Length = 335
Score = 95.5 bits (236), Expect = 3e-18
Identities = 48/63 (76%), Positives = 55/63 (87%)
Frame = -3
Query: 566 LKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQIDK 387
L+SIFIDQLE PP+IYNCLKKS+I TLL+LLN SQEDL+KIEHFR+EDV+ IL IL K
Sbjct: 267 LESIFIDQLEFPPKIYNCLKKSNIFTLLDLLNNSQEDLIKIEHFRLEDVKQILGIL--GK 324
Query: 386 HFA 378
HFA
Sbjct: 325 HFA 327
[58][TOP]
>UniRef100_A8SED5 DNA-directed RNA polymerase subunit alpha n=2 Tax=Ceratophyllum
demersum RepID=RPOA_CERDE
Length = 337
Score = 95.5 bits (236), Expect = 3e-18
Identities = 51/74 (68%), Positives = 61/74 (82%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
I LK IFIDQLELP R YNCLK+S+IHTL +LL+ S+EDLM+IEHFRVEDV+ IL+ILQ
Sbjct: 267 IALKCIFIDQLELPSRTYNCLKRSNIHTLFDLLSNSKEDLMRIEHFRVEDVKQILDILQ- 325
Query: 392 DKHFA*ICNPLDFF 351
K+FA + P DFF
Sbjct: 326 -KNFA-MNLPKDFF 337
[59][TOP]
>UniRef100_B0FIU6 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta japonica
RepID=B0FIU6_CUSJA
Length = 332
Score = 95.1 bits (235), Expect = 3e-18
Identities = 47/66 (71%), Positives = 57/66 (86%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ L+S+FIDQLE PP+IYNCLKKS+I TLL+LLN SQEDL+KIEHFR+EDV+ IL IL
Sbjct: 261 KLSLESLFIDQLEFPPKIYNCLKKSNIFTLLDLLNNSQEDLIKIEHFRLEDVKQILAIL- 319
Query: 395 IDKHFA 378
KHFA
Sbjct: 320 -GKHFA 324
[60][TOP]
>UniRef100_Q9XQN8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Sinapis alba
RepID=RPOA_SINAL
Length = 327
Score = 95.1 bits (235), Expect = 3e-18
Identities = 43/60 (71%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ + IFIDQLELPPRIYNCLKKS+IHTLL+LLN SQEDL+K+EHF +EDV+ +L+IL+
Sbjct: 266 ELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLNNSQEDLIKMEHFHIEDVKKLLDILE 325
[61][TOP]
>UniRef100_Q49CA2 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cuscuta japonica
RepID=RPOA_CUSJA
Length = 332
Score = 95.1 bits (235), Expect = 3e-18
Identities = 47/66 (71%), Positives = 57/66 (86%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ L+S+FIDQLE PP+IYNCLKKS+I TLL+LLN SQEDL+KIEHFR+EDV+ IL IL
Sbjct: 261 KLSLESLFIDQLEFPPKIYNCLKKSNIFTLLDLLNNSQEDLIKIEHFRLEDVKQILAIL- 319
Query: 395 IDKHFA 378
KHFA
Sbjct: 320 -GKHFA 324
[62][TOP]
>UniRef100_A9QBM7 RNA polymerase alpha subunit (Fragment) n=1 Tax=Musa acuminata
RepID=A9QBM7_MUSAC
Length = 339
Score = 94.7 bits (234), Expect = 4e-18
Identities = 48/66 (72%), Positives = 56/66 (84%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQ ELP R YNCLK+S+IHTLL+LLNKSQEDLM+IE+FR+EDV+ I + LQ
Sbjct: 266 EIPLKCIFIDQSELPSRTYNCLKRSNIHTLLDLLNKSQEDLMRIEYFRIEDVKEISDTLQ 325
Query: 395 IDKHFA 378
KHFA
Sbjct: 326 --KHFA 329
[63][TOP]
>UniRef100_Q8SKY1 DNA-directed RNA polymerase subunit alpha n=2 Tax=Cuscuta reflexa
RepID=RPOA_CUSRE
Length = 335
Score = 94.7 bits (234), Expect = 4e-18
Identities = 47/66 (71%), Positives = 56/66 (84%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ L+SIFIDQLE PP+IYNCLKKS+I TLL+LLN SQEDL+KIEHF +EDV+ IL IL
Sbjct: 264 KLSLESIFIDQLEFPPKIYNCLKKSNIFTLLDLLNNSQEDLIKIEHFHLEDVKQILGIL- 322
Query: 395 IDKHFA 378
KHFA
Sbjct: 323 -GKHFA 327
[64][TOP]
>UniRef100_Q06GM8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Piper cenocladum
RepID=RPOA_PIPCE
Length = 339
Score = 94.0 bits (232), Expect = 7e-18
Identities = 47/65 (72%), Positives = 56/65 (86%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ LKSIFIDQ ELP + YNCLKKS+IHTLL+LLN SQEDL+KIEHF +EDV+ IL+ILQ
Sbjct: 268 KMALKSIFIDQSELPSKTYNCLKKSNIHTLLDLLNNSQEDLLKIEHFCMEDVKRILDILQ 327
Query: 395 IDKHF 381
KHF
Sbjct: 328 --KHF 330
[65][TOP]
>UniRef100_Q06GW5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Drimys
granadensis RepID=RPOA_DRIGR
Length = 339
Score = 94.0 bits (232), Expect = 7e-18
Identities = 46/64 (71%), Positives = 55/64 (85%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
I L+ IFIDQ ELPPR YNCLK+S+IHTLL+LL+ SQEDLM+IEH R+EDV+ IL+ILQ
Sbjct: 269 IALECIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIEHLRIEDVKRILDILQ- 327
Query: 392 DKHF 381
KHF
Sbjct: 328 -KHF 330
[66][TOP]
>UniRef100_Q4QZ04 DNA-directed RNA polymerase alpha chain n=1 Tax=Chrysanthemum x
morifolium RepID=Q4QZ04_CHRMO
Length = 335
Score = 93.6 bits (231), Expect = 1e-17
Identities = 43/60 (71%), Positives = 54/60 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ LKSIFIDQ ELPPRIYNCLK+S+I+TLL+LLN SQ+DLMK+EHF +EDV+ IL IL+
Sbjct: 264 KMALKSIFIDQSELPPRIYNCLKRSNIYTLLDLLNNSQDDLMKMEHFHIEDVKQILGILE 323
[67][TOP]
>UniRef100_P60314 DNA-directed RNA polymerase subunit alpha n=1 Tax=Amborella
trichopoda RepID=RPOA_AMBTC
Length = 334
Score = 93.6 bits (231), Expect = 1e-17
Identities = 47/65 (72%), Positives = 56/65 (86%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
I LK IFIDQLEL PR YNCLK+S+IHTLL+LL+KSQEDL KI+HFRVEDV+ +L+IL+
Sbjct: 267 IALKRIFIDQLELSPRTYNCLKRSNIHTLLDLLSKSQEDLRKIQHFRVEDVKRVLDILK- 325
Query: 392 DKHFA 378
K FA
Sbjct: 326 -KRFA 329
[68][TOP]
>UniRef100_B5AH30 RNA polymerase alpha subunit n=1 Tax=Gonystylus bancanus
RepID=B5AH30_9ROSI
Length = 329
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/60 (75%), Positives = 50/60 (83%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK FIDQ ELPPRIYNCLK S+IHTL +LLNKSQEDLMKIEHF EDV+ IL I++
Sbjct: 268 EIALKYFFIDQSELPPRIYNCLKTSNIHTLFDLLNKSQEDLMKIEHFHREDVKQILGIIE 327
[69][TOP]
>UniRef100_Q33C00 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nicotiana
tomentosiformis RepID=RPOA_NICTO
Length = 337
Score = 92.8 bits (229), Expect = 2e-17
Identities = 46/60 (76%), Positives = 52/60 (86%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I LKSIFIDQ ELP RIYNCLK S+I+TLL+LLN SQEDLMKIEHFR EDV+ IL IL+
Sbjct: 266 KIALKSIFIDQSELPSRIYNCLKMSNIYTLLDLLNNSQEDLMKIEHFRSEDVKQILGILE 325
[70][TOP]
>UniRef100_Q3C1M3 DNA-directed RNA polymerase subunit alpha n=2 Tax=Nicotiana
RepID=RPOA_NICSY
Length = 337
Score = 92.8 bits (229), Expect = 2e-17
Identities = 46/60 (76%), Positives = 52/60 (86%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I LKSIFIDQ ELP RIYNCLK S+I+TLL+LLN SQEDLMKIEHFR EDV+ IL IL+
Sbjct: 266 KIALKSIFIDQSELPSRIYNCLKMSNIYTLLDLLNNSQEDLMKIEHFRSEDVKRILGILE 325
[71][TOP]
>UniRef100_C3UP04 RNA polymerase alpha subunit n=1 Tax=Megaleranthis saniculifolia
RepID=C3UP04_9MAGN
Length = 328
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/60 (73%), Positives = 52/60 (86%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK IFIDQ ELP R YNCLK+ +IHTLL+LLNKSQEDLMK+EHFR+EDV+ IL I++
Sbjct: 266 EIELKCIFIDQSELPSRTYNCLKRFNIHTLLDLLNKSQEDLMKMEHFRIEDVRRILGIIK 325
[72][TOP]
>UniRef100_A6MMX6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Illicium
oligandrum RepID=RPOA_ILLOL
Length = 331
Score = 92.4 bits (228), Expect = 2e-17
Identities = 46/65 (70%), Positives = 54/65 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
I LK +FIDQ ELP R YNCLK+S+IHTLL+LL+ SQEDLM+IEHFR+EDV+ IL ILQ
Sbjct: 267 IALKRVFIDQSELPTRTYNCLKRSNIHTLLDLLSNSQEDLMRIEHFRIEDVKQILGILQ- 325
Query: 392 DKHFA 378
K FA
Sbjct: 326 -KRFA 329
[73][TOP]
>UniRef100_Q8S8V9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Atropa belladonna
RepID=RPOA_ATRBE
Length = 337
Score = 92.4 bits (228), Expect = 2e-17
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I LKSIFIDQ ELP RIYNCLK S+I+TLL+LLN SQEDLMKIEHFR ED++ IL IL+
Sbjct: 266 KIALKSIFIDQSELPSRIYNCLKMSNIYTLLDLLNNSQEDLMKIEHFRSEDIKQILGILE 325
[74][TOP]
>UniRef100_B0FIU3 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta nitida
RepID=B0FIU3_9ASTE
Length = 339
Score = 92.0 bits (227), Expect = 3e-17
Identities = 46/63 (73%), Positives = 54/63 (85%)
Frame = -3
Query: 566 LKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQIDK 387
LKSIFIDQL PP+IYNCL KS+I TLL+LLNKSQEDL+KIEHF +EDV+ IL IL +K
Sbjct: 266 LKSIFIDQLAFPPKIYNCLTKSNIFTLLDLLNKSQEDLLKIEHFHIEDVKQILGIL--EK 323
Query: 386 HFA 378
+FA
Sbjct: 324 NFA 326
[75][TOP]
>UniRef100_Q09WY5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Morus indica
RepID=RPOA_MORIN
Length = 323
Score = 91.7 bits (226), Expect = 4e-17
Identities = 42/61 (68%), Positives = 55/61 (90%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI LK I+IDQ ELPPR+YNCLK+S+I+T LELLN SQE+LMKI+ FR+EDV++IL++L+
Sbjct: 263 EIALKYIYIDQSELPPRVYNCLKRSNINTFLELLNNSQEELMKIQDFRIEDVKHILDVLE 322
Query: 395 I 393
I
Sbjct: 323 I 323
[76][TOP]
>UniRef100_Q7YJ39 RNA polymerase alpha subunit (Fragment) n=1 Tax=Nicotiana
sylvestris RepID=Q7YJ39_NICSY
Length = 79
Score = 91.3 bits (225), Expect = 5e-17
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNIL 408
+I LKSIFIDQLELP RIYNCLK S+I+TLL+LLN SQEDLMKIEHFR EDV+ IL
Sbjct: 23 KIALKSIFIDQLELPSRIYNCLKMSNIYTLLDLLNNSQEDLMKIEHFRSEDVKRIL 78
[77][TOP]
>UniRef100_Q7YJ18 RNA polymerase alpha subunit (Fragment) n=1 Tax=Nicotiana
tomentosiformis RepID=Q7YJ18_NICTO
Length = 77
Score = 91.3 bits (225), Expect = 5e-17
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNIL 408
+I LKSIFIDQLELP RIYNCLK S+I+TLL+LLN SQEDLMKIEHFR EDV+ IL
Sbjct: 21 KIALKSIFIDQLELPSRIYNCLKMSNIYTLLDLLNNSQEDLMKIEHFRSEDVKQIL 76
[78][TOP]
>UniRef100_A7R909 Chromosome undetermined scaffold_3171, whole genome shotgun
sequence n=1 Tax=Vitis vinifera RepID=A7R909_VITVI
Length = 313
Score = 90.1 bits (222), Expect = 1e-16
Identities = 43/51 (84%), Positives = 48/51 (94%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVED 423
EI LK IFIDQLELPPRIYNCLK+S+IHTLL+LLNKSQ+DLMKIE FR+ED
Sbjct: 260 EIELKYIFIDQLELPPRIYNCLKRSNIHTLLDLLNKSQKDLMKIEDFRIED 310
[79][TOP]
>UniRef100_A6MMF4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chloranthus
spicatus RepID=RPOA_CHLSC
Length = 334
Score = 90.1 bits (222), Expect = 1e-16
Identities = 46/68 (67%), Positives = 55/68 (80%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
I LK IFIDQ ELPPR YN LK+S+I+TLL+LL+ SQED +KIEHFR+EDV+ IL+ILQ
Sbjct: 269 IALKCIFIDQSELPPRTYNYLKRSNINTLLDLLSNSQEDFLKIEHFRIEDVKQILDILQ- 327
Query: 392 DKHFA*IC 369
KHF C
Sbjct: 328 -KHFTIDC 334
[80][TOP]
>UniRef100_Q2MI69 DNA-directed RNA polymerase subunit alpha n=1 Tax=Solanum
lycopersicum RepID=RPOA_SOLLC
Length = 337
Score = 89.7 bits (221), Expect = 1e-16
Identities = 44/60 (73%), Positives = 52/60 (86%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I LKSIFIDQ EL RIYNCLK S+I+TLL+LLN SQEDLMKIEHFR ED++ IL+IL+
Sbjct: 266 KIALKSIFIDQSELSSRIYNCLKMSNIYTLLDLLNNSQEDLMKIEHFRSEDIKQILDILE 325
[81][TOP]
>UniRef100_Q2MIF6 DNA-directed RNA polymerase subunit alpha n=2 Tax=Solanum
RepID=RPOA_SOLBU
Length = 337
Score = 89.4 bits (220), Expect = 2e-16
Identities = 44/60 (73%), Positives = 51/60 (85%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I LKSIFIDQ EL RIYNCLK S+I+TLL+LLN SQEDLMKIEHFR ED++ IL IL+
Sbjct: 266 KIALKSIFIDQSELSSRIYNCLKMSNIYTLLDLLNNSQEDLMKIEHFRSEDIKQILGILE 325
[82][TOP]
>UniRef100_Q49C94 RpoA n=1 Tax=Cuscuta europaea RepID=Q49C94_CUSEU
Length = 329
Score = 88.2 bits (217), Expect = 4e-16
Identities = 42/66 (63%), Positives = 55/66 (83%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ LK IFIDQLE PP+IYNCLKKS+I TL +L N+ QEDL+KIEHF++ED+++IL IL
Sbjct: 264 KLSLKLIFIDQLEFPPKIYNCLKKSNIFTLFDLFNQKQEDLLKIEHFQLEDIKHILGIL- 322
Query: 395 IDKHFA 378
K+FA
Sbjct: 323 -GKYFA 327
[83][TOP]
>UniRef100_B0FIU5 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta europaea
RepID=B0FIU5_CUSEU
Length = 329
Score = 88.2 bits (217), Expect = 4e-16
Identities = 42/66 (63%), Positives = 55/66 (83%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ LK IFIDQLE PP+IYNCLKKS+I TL +L N+ QEDL+KIEHF++ED+++IL IL
Sbjct: 264 KLSLKLIFIDQLEFPPKIYNCLKKSNIFTLFDLFNQKQEDLLKIEHFQLEDIKHILGIL- 322
Query: 395 IDKHFA 378
K+FA
Sbjct: 323 -GKYFA 327
[84][TOP]
>UniRef100_A6MMN9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Dioscorea
elephantipes RepID=RPOA_DIOEL
Length = 337
Score = 88.2 bits (217), Expect = 4e-16
Identities = 44/65 (67%), Positives = 55/65 (84%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
I LK IFIDQLELP R YNCLK+S+IHTLL+LL+K QE+L+K+E+F +EDV+ IL+ LQ
Sbjct: 267 IPLKYIFIDQLELPSRTYNCLKRSNIHTLLDLLSKGQENLIKMEYFHIEDVKQILDTLQ- 325
Query: 392 DKHFA 378
KHFA
Sbjct: 326 -KHFA 329
[85][TOP]
>UniRef100_B9NIL3 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9NIL3_POPTR
Length = 54
Score = 87.8 bits (216), Expect = 5e-16
Identities = 41/52 (78%), Positives = 48/52 (92%)
Frame = -3
Query: 566 LKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNI 411
LKSIFIDQLEL P+IYNCLK+S+IHTL +LL SQEDLMKIEHFR+EDV++I
Sbjct: 1 LKSIFIDQLELAPKIYNCLKRSNIHTLWDLLKNSQEDLMKIEHFRIEDVKHI 52
[86][TOP]
>UniRef100_B9I8G2 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9I8G2_POPTR
Length = 62
Score = 87.4 bits (215), Expect = 7e-16
Identities = 42/61 (68%), Positives = 50/61 (81%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I LKSI IDQLEL P+IYNCLK+S IHTL + L SQEDLMK EHFR+EDV++I IL+
Sbjct: 2 KIALKSIIIDQLELAPKIYNCLKRSVIHTLWDFLKNSQEDLMKTEHFRIEDVKHIFGILK 61
Query: 395 I 393
I
Sbjct: 62 I 62
[87][TOP]
>UniRef100_C3W1N1 RNA polymerase alpha subunit n=1 Tax=Larix occidentalis
RepID=C3W1N1_LAROX
Length = 335
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/66 (63%), Positives = 53/66 (80%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I K IFIDQLELPPR YNCL++++IHTLL+LLN S+EDLM+IEHF E V+ +L +LQ
Sbjct: 266 KIAFKHIFIDQLELPPRTYNCLRRANIHTLLDLLNYSREDLMRIEHFGKESVEQVLEVLQ 325
Query: 395 IDKHFA 378
K FA
Sbjct: 326 --KRFA 329
[88][TOP]
>UniRef100_A7QC74 Chromosome chr10 scaffold_76, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QC74_VITVI
Length = 310
Score = 87.0 bits (214), Expect = 9e-16
Identities = 41/51 (80%), Positives = 48/51 (94%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVED 423
EI LK IFIDQLELPPRIYNCLK+S+IHTLL+LLNKSQ+DL++IE FR+ED
Sbjct: 257 EIELKYIFIDQLELPPRIYNCLKRSNIHTLLDLLNKSQKDLIQIEDFRIED 307
[89][TOP]
>UniRef100_Q06RA0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Jasminum
nudiflorum RepID=RPOA_JASNU
Length = 355
Score = 86.7 bits (213), Expect = 1e-15
Identities = 46/66 (69%), Positives = 56/66 (84%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I LKSIFIDQ ELP ++YNCLK S+++TLL+LLNKSQEDLMK+EH R+EDV +IL IL
Sbjct: 270 KIALKSIFIDQSELP-KVYNCLKGSNLYTLLDLLNKSQEDLMKMEHLRLEDVNHILVIL- 327
Query: 395 IDKHFA 378
KHFA
Sbjct: 328 ARKHFA 333
[90][TOP]
>UniRef100_C7SM26 RNA polymerase alpha subunit n=1 Tax=Joinvillea plicata
RepID=C7SM26_9POAL
Length = 339
Score = 86.3 bits (212), Expect = 2e-15
Identities = 44/65 (67%), Positives = 54/65 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
I L IFIDQLELP R YNCLK+S+IHTLL+LL+KS+EDLMKIE+FR+ED + IL+ LQ
Sbjct: 267 IPLNCIFIDQLELPSRTYNCLKRSNIHTLLDLLSKSEEDLMKIENFRMEDGKQILDTLQ- 325
Query: 392 DKHFA 378
KH +
Sbjct: 326 -KHLS 329
[91][TOP]
>UniRef100_B7T413 RNA polymerase alpha subunit n=1 Tax=Monsonia vanderietiae
RepID=B7T413_9ROSI
Length = 333
Score = 86.3 bits (212), Expect = 2e-15
Identities = 40/58 (68%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Frame = -3
Query: 569 GLKSIFIDQL-ELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNIL 399
GLK I+IDQL ELPPR YNCLK+S IHT+++LL+KS++DLMKI HFR EDV+ ++NIL
Sbjct: 261 GLKEIYIDQLVELPPRFYNCLKRSGIHTVMDLLDKSRDDLMKITHFRQEDVERVMNIL 318
[92][TOP]
>UniRef100_Q5IBI2 RNA polymerase alpha subunit (Fragment) n=1 Tax=Plantago rugelii
RepID=Q5IBI2_9LAMI
Length = 308
Score = 85.5 bits (210), Expect = 3e-15
Identities = 39/57 (68%), Positives = 49/57 (85%)
Frame = -3
Query: 566 LKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
L+SIFIDQ EL PR+YNCLKKS+I+TL + L KSQEDLMK+EHFR+ED++ L IL+
Sbjct: 252 LQSIFIDQFELSPRVYNCLKKSNIYTLFDFLTKSQEDLMKMEHFRLEDLKQTLGILE 308
[93][TOP]
>UniRef100_Q4FGA0 RNA polymerase alpha chain (Fragment) n=1 Tax=Typha latifolia
RepID=Q4FGA0_TYPLA
Length = 339
Score = 84.3 bits (207), Expect = 6e-15
Identities = 43/65 (66%), Positives = 53/65 (81%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
I L IFIDQLELP R YNCLK+S+IHTLL+LL+ QEDLM+IE+ R+EDV+ IL+ LQ
Sbjct: 267 IPLNCIFIDQLELPSRTYNCLKRSNIHTLLDLLSNGQEDLMRIEYLRMEDVKQILDTLQ- 325
Query: 392 DKHFA 378
K+FA
Sbjct: 326 -KNFA 329
[94][TOP]
>UniRef100_C3W0T7 RNA polymerase alpha subunit n=1 Tax=Cedrus deodara
RepID=C3W0T7_CEDDE
Length = 335
Score = 84.0 bits (206), Expect = 8e-15
Identities = 40/66 (60%), Positives = 53/66 (80%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPPR YNCL++++IHTLL+LLN S+EDLM+IEHF E V+ +L +L+
Sbjct: 266 KIAFQHIFIDQLELPPRTYNCLRRANIHTLLDLLNYSREDLMRIEHFGKESVEQVLEVLR 325
Query: 395 IDKHFA 378
K FA
Sbjct: 326 --KRFA 329
[95][TOP]
>UniRef100_B7T3U2 RNA polymerase alpha subunit n=1 Tax=Monsonia speciosa
RepID=B7T3U2_9ROSI
Length = 331
Score = 84.0 bits (206), Expect = 8e-15
Identities = 40/75 (53%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = -3
Query: 569 GLKSIFIDQL-ELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
GLK I+IDQL ELPPR YNCLK+S IHT+++LL+K+++DLMK+ HFR ED++ ++NIL
Sbjct: 259 GLKDIYIDQLVELPPRFYNCLKRSGIHTVMDLLDKNRDDLMKMTHFRQEDIEGVMNIL-- 316
Query: 392 DKHFA*ICNPLDFFF 348
+ + + + + FFF
Sbjct: 317 NNNISQLLSRRGFFF 331
[96][TOP]
>UniRef100_A9QC21 RNA polymerase alpha subunit (Fragment) n=1 Tax=Scaevola aemula
RepID=A9QC21_9ASTR
Length = 332
Score = 84.0 bits (206), Expect = 8e-15
Identities = 39/60 (65%), Positives = 49/60 (81%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ LKSIFIDQ ELPP IYNCLK+S+I+TL +LLN SQEDLMK H +EDV+ IL +L+
Sbjct: 261 KMALKSIFIDQSELPPSIYNCLKRSNIYTLFDLLNNSQEDLMKKAHLHIEDVKRILGLLE 320
[97][TOP]
>UniRef100_C3VZD6 RNA polymerase alpha subunit n=1 Tax=Abies firma RepID=C3VZD6_ABIFI
Length = 336
Score = 83.6 bits (205), Expect = 1e-14
Identities = 39/66 (59%), Positives = 53/66 (80%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPPR YNCL++++IHTLL+LLN S+EDLM+IEHF E ++ +L +L+
Sbjct: 267 KIAFQHIFIDQLELPPRTYNCLRRANIHTLLDLLNYSREDLMRIEHFGKESIEQVLEVLR 326
Query: 395 IDKHFA 378
K FA
Sbjct: 327 --KRFA 330
[98][TOP]
>UniRef100_B0FIU4 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta epilinum
RepID=B0FIU4_9ASTE
Length = 330
Score = 83.6 bits (205), Expect = 1e-14
Identities = 40/66 (60%), Positives = 52/66 (78%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ LK IFIDQLE PP+IYNCL KS+I TL +L N +EDL+KIEHF++ED++ IL IL
Sbjct: 264 KLSLKLIFIDQLEFPPKIYNCLTKSNIFTLFDLFNHKEEDLLKIEHFQLEDIKKILGILA 323
Query: 395 IDKHFA 378
K+FA
Sbjct: 324 --KYFA 327
[99][TOP]
>UniRef100_Q3BAK5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Phalaenopsis
aphrodite subsp. formosana RepID=RPOA_PHAAO
Length = 337
Score = 83.2 bits (204), Expect = 1e-14
Identities = 43/65 (66%), Positives = 52/65 (80%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
I L IFIDQ EL R YNCLK+S+IHTLL+LL+ SQEDLMK+E+FR EDV+ IL+ +Q
Sbjct: 267 IPLTCIFIDQSELSSRTYNCLKRSNIHTLLDLLSHSQEDLMKMEYFRTEDVKQILSTVQ- 325
Query: 392 DKHFA 378
KHFA
Sbjct: 326 -KHFA 329
[100][TOP]
>UniRef100_B7ZIR8 RNA polymerase alpha chain n=1 Tax=Keteleeria davidiana
RepID=B7ZIR8_KETDA
Length = 336
Score = 82.8 bits (203), Expect = 2e-14
Identities = 39/66 (59%), Positives = 53/66 (80%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPPR YNCL++++IHTLL+LLN S+EDLM++EHF E V+ +L +L+
Sbjct: 267 KIAFQHIFIDQLELPPRTYNCLRRANIHTLLDLLNYSREDLMRMEHFGKESVEQVLEVLR 326
Query: 395 IDKHFA 378
K FA
Sbjct: 327 --KRFA 330
[101][TOP]
>UniRef100_A9QBD4 RNA polymerase alpha subunit (Fragment) n=1 Tax=Elaeis oleifera
RepID=A9QBD4_ELAOL
Length = 339
Score = 82.4 bits (202), Expect = 2e-14
Identities = 43/65 (66%), Positives = 52/65 (80%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
I LK IFIDQ ELP R YNCLK S+IHTL +LL+ SQEDLM+I+ FR+EDV+ IL+ LQ
Sbjct: 267 IPLKCIFIDQSELPSRTYNCLKGSNIHTLSDLLSNSQEDLMRIKFFRIEDVKQILDTLQ- 325
Query: 392 DKHFA 378
K+FA
Sbjct: 326 -KYFA 329
[102][TOP]
>UniRef100_C3VYP0 RNA polymerase alpha subunit n=1 Tax=Pinus taeda RepID=C3VYP0_PINTA
Length = 335
Score = 81.3 bits (199), Expect = 5e-14
Identities = 37/60 (61%), Positives = 50/60 (83%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+IYN L++++IHTLL+LLN S+EDLM+IEHF E V+ +L +LQ
Sbjct: 266 KIAFQLIFIDQLELPPKIYNSLRRANIHTLLDLLNYSREDLMRIEHFGKESVEQVLEVLQ 325
[103][TOP]
>UniRef100_A6H5L3 DNA-directed RNA polymerase subunit alpha n=2 Tax=Cycas
RepID=RPOA_CYCTA
Length = 340
Score = 80.5 bits (197), Expect = 9e-14
Identities = 39/66 (59%), Positives = 49/66 (74%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ K IFIDQ ELPPR+YNCL + +IHTL +LLN SQEDLM+I HF + V+ + +LQ
Sbjct: 266 EVAFKHIFIDQSELPPRVYNCLGRVNIHTLSDLLNYSQEDLMRIGHFGKKSVEQVSEVLQ 325
Query: 395 IDKHFA 378
KHFA
Sbjct: 326 --KHFA 329
[104][TOP]
>UniRef100_C3W219 RNA polymerase alpha subunit n=1 Tax=Pinus monticola
RepID=C3W219_PINMO
Length = 335
Score = 80.1 bits (196), Expect = 1e-13
Identities = 39/66 (59%), Positives = 51/66 (77%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I K IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLMKIEH E V+ +L +L+
Sbjct: 266 KIAFKHIFIDQLELPPKTYNSLRRANIHTLLDLLNYSREDLMKIEHLEKESVEQVLEVLR 325
Query: 395 IDKHFA 378
K FA
Sbjct: 326 --KRFA 329
[105][TOP]
>UniRef100_C3VZJ9 RNA polymerase alpha subunit n=1 Tax=Pinus albicaulis
RepID=C3VZJ9_9CONI
Length = 335
Score = 80.1 bits (196), Expect = 1e-13
Identities = 39/66 (59%), Positives = 51/66 (77%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I K IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLMKIEH E V+ +L +L+
Sbjct: 266 KIAFKHIFIDQLELPPKTYNSLRRANIHTLLDLLNYSREDLMKIEHLEKESVEQVLEVLR 325
Query: 395 IDKHFA 378
K FA
Sbjct: 326 --KRFA 329
[106][TOP]
>UniRef100_Q85X01 DNA-directed RNA polymerase subunit alpha n=5 Tax=Strobus
RepID=RPOA_PINKO
Length = 335
Score = 80.1 bits (196), Expect = 1e-13
Identities = 39/66 (59%), Positives = 51/66 (77%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I K IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLMKIEH E V+ +L +L+
Sbjct: 266 KIAFKHIFIDQLELPPKTYNSLRRANIHTLLDLLNYSREDLMKIEHLEKESVEQVLEVLR 325
Query: 395 IDKHFA 378
K FA
Sbjct: 326 --KRFA 329
[107][TOP]
>UniRef100_C1IXP0 RNA polymerase alpha subunit n=1 Tax=Pinus contorta
RepID=C1IXP0_PINCO
Length = 335
Score = 79.7 bits (195), Expect = 1e-13
Identities = 36/60 (60%), Positives = 50/60 (83%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+IYN L++++IHTLL+LLN S+EDLM+I+HF E V+ +L +LQ
Sbjct: 266 KIAFQLIFIDQLELPPKIYNSLRRANIHTLLDLLNYSREDLMRIKHFGKESVEQVLEVLQ 325
[108][TOP]
>UniRef100_C3W1V8 RNA polymerase alpha subunit n=1 Tax=Pinus merkusii
RepID=C3W1V8_9CONI
Length = 335
Score = 79.3 bits (194), Expect = 2e-13
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLM+IEHF E V+ +L +LQ
Sbjct: 266 KIAFQLIFIDQLELPPKTYNSLRRANIHTLLDLLNYSREDLMRIEHFGKESVEQVLEVLQ 325
[109][TOP]
>UniRef100_C3VZ24 RNA polymerase alpha subunit n=2 Tax=Pinus torreyana
RepID=C3VZ24_PINTO
Length = 335
Score = 79.3 bits (194), Expect = 2e-13
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLM+IEHF E V+ +L +LQ
Sbjct: 266 KIAFQLIFIDQLELPPKTYNSLRRANIHTLLDLLNYSREDLMRIEHFGKESVEQVLEVLQ 325
[110][TOP]
>UniRef100_C3VXT2 RNA polymerase alpha subunit n=1 Tax=Pinus resinosa
RepID=C3VXT2_PINRE
Length = 335
Score = 79.3 bits (194), Expect = 2e-13
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLM+IEHF E V+ +L +LQ
Sbjct: 266 KIAFQLIFIDQLELPPKTYNSLRRANIHTLLDLLNYSREDLMRIEHFGKESVEQVLEVLQ 325
[111][TOP]
>UniRef100_C3VXH3 RNA polymerase alpha subunit n=2 Tax=Pinus RepID=C3VXH3_PINPO
Length = 335
Score = 79.3 bits (194), Expect = 2e-13
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLM+IEHF E V+ +L +LQ
Sbjct: 266 KIAFQLIFIDQLELPPKTYNSLRRANIHTLLDLLNYSREDLMRIEHFGKESVEQVLEVLQ 325
[112][TOP]
>UniRef100_P41629 DNA-directed RNA polymerase subunit alpha n=2 Tax=Pinus thunbergii
RepID=RPOA_PINTH
Length = 335
Score = 79.3 bits (194), Expect = 2e-13
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLM+IEHF E V+ +L +LQ
Sbjct: 266 KIAFQLIFIDQLELPPKTYNSLRRANIHTLLDLLNYSREDLMRIEHFGKESVEQVLEVLQ 325
[113][TOP]
>UniRef100_C3W2E4 RNA polymerase alpha subunit n=1 Tax=Pinus peuce RepID=C3W2E4_PINPE
Length = 335
Score = 78.6 bits (192), Expect = 3e-13
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLMKIEH E V+ +L +L+
Sbjct: 266 KIAFQHIFIDQLELPPKTYNSLRRANIHTLLDLLNYSREDLMKIEHLEKESVEQVLEVLR 325
Query: 395 IDKHFA 378
K FA
Sbjct: 326 --KRFA 329
[114][TOP]
>UniRef100_C3VYH6 RNA polymerase alpha subunit n=4 Tax=Strobus RepID=C3VYH6_PINST
Length = 335
Score = 78.6 bits (192), Expect = 3e-13
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLMKIEH E V+ +L +L+
Sbjct: 266 KIAFQHIFIDQLELPPKTYNSLRRANIHTLLDLLNYSREDLMKIEHLEKESVEQVLEVLR 325
Query: 395 IDKHFA 378
K FA
Sbjct: 326 --KRFA 329
[115][TOP]
>UniRef100_Q85A01 DNA-directed RNA polymerase subunit alpha n=1 Tax=Anthoceros
formosae RepID=RPOA_ANTFO
Length = 340
Score = 78.6 bits (192), Expect = 3e-13
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI K IFIDQLELP R YN LKK D+HT+ +LLN SQEDLMKI++F + +Q ++ LQ
Sbjct: 265 EISFKHIFIDQLELPARAYNGLKKVDVHTISDLLNYSQEDLMKIKNFGKKSIQQVVEALQ 324
Query: 395 IDKHFA 378
KHFA
Sbjct: 325 --KHFA 328
[116][TOP]
>UniRef100_B7T379 RNA polymerase alpha subunit n=1 Tax=Geranium carolinianum
RepID=B7T379_9ROSI
Length = 329
Score = 78.2 bits (191), Expect = 4e-13
Identities = 37/57 (64%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Frame = -3
Query: 566 LKSIFIDQL-ELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNIL 399
LK I+IDQL ELP R YNCLK+S IHT+++LLNK+ + LMKI HFR EDV+ ++NIL
Sbjct: 258 LKDIYIDQLVELPARFYNCLKRSGIHTVMDLLNKNTDGLMKITHFRQEDVEKVMNIL 314
[117][TOP]
>UniRef100_A1EA40 DNA-directed RNA polymerase subunit alpha n=1 Tax=Agrostis
stolonifera RepID=RPOA_AGRST
Length = 339
Score = 78.2 bits (191), Expect = 4e-13
Identities = 37/59 (62%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+IE FR+ED + I + L+
Sbjct: 267 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIESFRMEDRKQIWDTLE 325
[118][TOP]
>UniRef100_C3VYB7 RNA polymerase alpha subunit n=1 Tax=Pinus squamata
RepID=C3VYB7_9CONI
Length = 335
Score = 77.4 bits (189), Expect = 7e-13
Identities = 37/66 (56%), Positives = 51/66 (77%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLM+IEH E V+ +L +L+
Sbjct: 266 KIAFQHIFIDQLELPPKTYNSLRRANIHTLLDLLNYSREDLMRIEHLEKESVEQVLEVLR 325
Query: 395 IDKHFA 378
K FA
Sbjct: 326 --KRFA 329
[119][TOP]
>UniRef100_C1IXV8 RNA polymerase alpha subunit n=1 Tax=Pinus gerardiana
RepID=C1IXV8_PINGE
Length = 335
Score = 77.4 bits (189), Expect = 7e-13
Identities = 37/66 (56%), Positives = 51/66 (77%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLM+IEH E V+ +L +L+
Sbjct: 266 KIAFQHIFIDQLELPPKTYNSLRRANIHTLLDLLNYSREDLMRIEHLEKESVEQVLEVLR 325
Query: 395 IDKHFA 378
K FA
Sbjct: 326 --KRFA 329
[120][TOP]
>UniRef100_C1IXH8 RNA polymerase alpha subunit n=1 Tax=Picea sitchensis
RepID=C1IXH8_PICSI
Length = 336
Score = 77.4 bits (189), Expect = 7e-13
Identities = 37/66 (56%), Positives = 50/66 (75%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLE PPR+YNCL++++IHTL +LLN S+EDLM+IE F E V+ + IL+
Sbjct: 267 KIAFQHIFIDQLEFPPRVYNCLRRANIHTLSDLLNYSREDLMRIERFGKESVEQVFEILR 326
Query: 395 IDKHFA 378
K FA
Sbjct: 327 --KRFA 330
[121][TOP]
>UniRef100_C6GJ86 RpoA n=2 Tax=Bambuseae RepID=C6GJ86_BAMOL
Length = 339
Score = 77.0 bits (188), Expect = 9e-13
Identities = 36/59 (61%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ FR+ED + I + L+
Sbjct: 267 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMEDGKQIWDTLE 325
[122][TOP]
>UniRef100_C3W0M8 RNA polymerase alpha subunit n=1 Tax=Pinus canariensis
RepID=C3W0M8_9CONI
Length = 335
Score = 77.0 bits (188), Expect = 9e-13
Identities = 35/60 (58%), Positives = 48/60 (80%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+ YN L++++IHTL +LLN S+EDLM+IEHF E V+ +L +LQ
Sbjct: 266 KIAFQLIFIDQLELPPKTYNSLRRANIHTLSDLLNYSREDLMRIEHFGKESVEQVLEVLQ 325
[123][TOP]
>UniRef100_C3W0G5 RNA polymerase alpha subunit n=1 Tax=Pinus banksiana
RepID=C3W0G5_PINBN
Length = 335
Score = 77.0 bits (188), Expect = 9e-13
Identities = 35/60 (58%), Positives = 50/60 (83%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+IYN L++++IHTLL+LLN S+EDLM+I++F E V+ +L +LQ
Sbjct: 266 KIAFQLIFIDQLELPPKIYNSLRRANIHTLLDLLNYSREDLMRIKNFGKESVEQVLEVLQ 325
[124][TOP]
>UniRef100_B2ZE98 RNA polymerase alpha subunit n=1 Tax=Phyllostachys propinqua
RepID=B2ZE98_9POAL
Length = 339
Score = 77.0 bits (188), Expect = 9e-13
Identities = 36/59 (61%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ FR+ED + I + L+
Sbjct: 267 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMEDGKQIWDTLE 325
[125][TOP]
>UniRef100_B7T3M1 RNA polymerase alpha subunit n=1 Tax=Geranium palmatum
RepID=B7T3M1_9ROSI
Length = 329
Score = 76.6 bits (187), Expect = 1e-12
Identities = 36/57 (63%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Frame = -3
Query: 566 LKSIFIDQL-ELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNIL 399
LK I+IDQL ELP R YNCLK S IHT+++LLNK+ EDLMKI HFR +D++ +++IL
Sbjct: 258 LKDIYIDQLVELPARFYNCLKISGIHTVMDLLNKNTEDLMKITHFRQQDIEKVMHIL 314
[126][TOP]
>UniRef100_C8XU47 RNA polymerase alpha subunit n=1 Tax=Coix lacryma-jobi
RepID=C8XU47_COILA
Length = 339
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+S+IHTLL+LL+K++EDLM+I FR+ED + I + L+
Sbjct: 267 IPLNCIFIDQLELPSRTYNCLKRSNIHTLLDLLSKTEEDLMRINSFRMEDGKLIWDTLE 325
[127][TOP]
>UniRef100_C3W2L0 RNA polymerase alpha subunit n=1 Tax=Pinus pinaster
RepID=C3W2L0_PINPS
Length = 335
Score = 76.3 bits (186), Expect = 2e-12
Identities = 35/60 (58%), Positives = 48/60 (80%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLM+IE F E V+ +L +LQ
Sbjct: 266 KIAFQLIFIDQLELPPKTYNSLRRANIHTLLDLLNYSREDLMRIERFGKESVEQVLEVLQ 325
[128][TOP]
>UniRef100_C3VXZ8 RNA polymerase alpha subunit n=1 Tax=Pinus rzedowskii
RepID=C3VXZ8_PINRZ
Length = 335
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/66 (56%), Positives = 51/66 (77%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLM+IEH E V+ +L +L+
Sbjct: 266 KIAFQHIFIDQLELPPQTYNSLRRANIHTLLDLLNYSREDLMRIEHLGKESVEQVLEVLR 325
Query: 395 IDKHFA 378
K FA
Sbjct: 326 --KRFA 329
[129][TOP]
>UniRef100_UPI0000DD8D71 Os01g0789400 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD8D71
Length = 425
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ FR++D + I + L+
Sbjct: 355 IPLSCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTLE 413
[130][TOP]
>UniRef100_Q8S1Q6 Chloroplast RNA polymerase alpha chain n=1 Tax=Oryza sativa
Japonica Group RepID=Q8S1Q6_ORYSJ
Length = 337
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ FR++D + I + L+
Sbjct: 267 IPLSCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTLE 325
[131][TOP]
>UniRef100_Q7G6A7 DNA-directed RNA polymerase alpha chain, putative, expressed n=2
Tax=Oryza sativa RepID=Q7G6A7_ORYSJ
Length = 446
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ FR++D + I + L+
Sbjct: 376 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTLE 434
[132][TOP]
>UniRef100_Q7DNA8 OSJNBa0061C08.8 protein n=2 Tax=Oryza sativa RepID=Q7DNA8_ORYSJ
Length = 446
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ FR++D + I + L+
Sbjct: 376 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTLE 434
[133][TOP]
>UniRef100_Q2LIP7 RNA polymerase subunit (Fragment) n=1 Tax=Oryza sativa
RepID=Q2LIP7_ORYSA
Length = 317
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ FR++D + I + L+
Sbjct: 247 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTLE 305
[134][TOP]
>UniRef100_Q2LIP5 RNA polymerase subunit (Fragment) n=1 Tax=Oryza glumipatula
RepID=Q2LIP5_9ORYZ
Length = 317
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ FR++D + I + L+
Sbjct: 247 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTLE 305
[135][TOP]
>UniRef100_Q2LIP2 RNA polymerase subunit (Fragment) n=1 Tax=Oryza rhizomatis
RepID=Q2LIP2_9ORYZ
Length = 317
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ FR++D + I + L+
Sbjct: 247 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTLE 305
[136][TOP]
>UniRef100_Q2LIP1 RNA polymerase subunit (Fragment) n=1 Tax=Oryza punctata
RepID=Q2LIP1_ORYPU
Length = 317
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ FR++D + I + L+
Sbjct: 247 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTLE 305
[137][TOP]
>UniRef100_Q2LIP0 RNA polymerase subunit (Fragment) n=2 Tax=Oryza RepID=Q2LIP0_9ORYZ
Length = 317
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ FR++D + I + L+
Sbjct: 247 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTLE 305
[138][TOP]
>UniRef100_Q2LIN9 RNA polymerase subunit (Fragment) n=1 Tax=Oryza granulata
RepID=Q2LIN9_9ORYZ
Length = 317
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ FR++D + I + L+
Sbjct: 247 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTLE 305
[139][TOP]
>UniRef100_B7T309 RNA polymerase alpha subunit n=1 Tax=Erodium texanum
RepID=B7T309_EROTE
Length = 328
Score = 75.9 bits (185), Expect = 2e-12
Identities = 38/67 (56%), Positives = 52/67 (77%), Gaps = 3/67 (4%)
Frame = -3
Query: 569 GLKSIFIDQL-ELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNIL-- 399
GLK I+IDQL ELPPR+YN LK S IHT+++L++K+ + LMKI HFR EDV+ ++NIL
Sbjct: 257 GLKDIYIDQLVELPPRLYNSLKGSGIHTVMDLMDKNTDALMKIPHFRHEDVEKVMNILNK 316
Query: 398 QIDKHFA 378
I +H +
Sbjct: 317 NISQHLS 323
[140][TOP]
>UniRef100_P0C500 DNA-directed RNA polymerase subunit alpha n=7 Tax=Oryza
RepID=RPOA_ORYSJ
Length = 337
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ FR++D + I + L+
Sbjct: 267 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTLE 325
[141][TOP]
>UniRef100_Q4FGA3 RNA polymerase alpha chain (Fragment) n=1 Tax=Ginkgo biloba
RepID=Q4FGA3_GINBI
Length = 337
Score = 75.5 bits (184), Expect = 3e-12
Identities = 38/66 (57%), Positives = 49/66 (74%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI K IFIDQ ELPPR+YNCLK+ +IHTL +LLN S++D +IE+F + V+ IL +LQ
Sbjct: 266 EIAFKHIFIDQSELPPRVYNCLKRVNIHTLSDLLNYSRDDPTRIENFGNQSVEQILEVLQ 325
Query: 395 IDKHFA 378
K FA
Sbjct: 326 --KRFA 329
[142][TOP]
>UniRef100_C3VZR7 RNA polymerase alpha subunit n=1 Tax=Pinus aristata
RepID=C3VZR7_9CONI
Length = 335
Score = 75.5 bits (184), Expect = 3e-12
Identities = 34/60 (56%), Positives = 48/60 (80%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELPP+ YN L++++IHTLL+LLN S+EDLM+IEH E V+ +L +L+
Sbjct: 266 KIAFQHIFIDQLELPPQTYNSLRRANIHTLLDLLNYSREDLMRIEHLGKESVEQVLEVLR 325
[143][TOP]
>UniRef100_Q539V4 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys caduca
RepID=Q539V4_9POAL
Length = 339
Score = 75.1 bits (183), Expect = 4e-12
Identities = 38/73 (52%), Positives = 54/73 (73%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDLM+I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMEDRKHIWDTLEK 326
Query: 392 DKHFA*ICNPLDF 354
+ + N L F
Sbjct: 327 NLPIDLLKNKLSF 339
[144][TOP]
>UniRef100_B8Y305 RNA polymerase alpha subunit n=1 Tax=Festuca arundinacea
RepID=B8Y305_FESAR
Length = 346
Score = 75.1 bits (183), Expect = 4e-12
Identities = 35/59 (59%), Positives = 48/59 (81%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ F +ED + I + L+
Sbjct: 274 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFHMEDGKQIWDTLE 332
[145][TOP]
>UniRef100_A1E9V6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Sorghum bicolor
RepID=RPOA_SORBI
Length = 339
Score = 75.1 bits (183), Expect = 4e-12
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I FR+ED + I + L+
Sbjct: 267 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRINSFRMEDGKLIWDTLE 325
[146][TOP]
>UniRef100_Q6L370 DNA-directed RNA polymerase subunit alpha n=2 Tax=Saccharum
RepID=RPOA_SACHY
Length = 339
Score = 75.1 bits (183), Expect = 4e-12
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I FR+ED + I + L+
Sbjct: 267 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRINSFRMEDGKLIWDTLE 325
[147][TOP]
>UniRef100_A8Y9B8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lolium perenne
RepID=RPOA_LOLPR
Length = 341
Score = 75.1 bits (183), Expect = 4e-12
Identities = 35/59 (59%), Positives = 48/59 (81%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I+ F +ED + I + L+
Sbjct: 269 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFHMEDGKQIWDTLE 327
[148][TOP]
>UniRef100_P92429 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aegilops tauschii
RepID=RPOA_AEGTA
Length = 339
Score = 75.1 bits (183), Expect = 4e-12
Identities = 35/59 (59%), Positives = 50/59 (84%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L SIFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNSIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[149][TOP]
>UniRef100_Q5EFZ1 RNA polymerase alpha subunit n=1 Tax=Buxbaumia aphylla
RepID=Q5EFZ1_9BRYO
Length = 340
Score = 74.7 bits (182), Expect = 5e-12
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ K IFIDQLELP R YNCLK+ +++TL +LLN SQEDLMKI++F + V+ +L LQ
Sbjct: 266 EVSFKHIFIDQLELPARAYNCLKRVNVNTLADLLNYSQEDLMKIKNFGKKSVEQVLEALQ 325
[150][TOP]
>UniRef100_P09562 DNA-directed RNA polymerase subunit alpha n=1 Tax=Zea mays
RepID=RPOA_MAIZE
Length = 339
Score = 74.7 bits (182), Expect = 5e-12
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YNCLK+++IHTLL+LL+K++EDLM+I FR+ED + I + L+
Sbjct: 267 IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMQINSFRMEDGKLIWDTLE 325
[151][TOP]
>UniRef100_Q5EFY8 RNA polymerase alpha subunit n=1 Tax=Oedipodium griffithianum
RepID=Q5EFY8_9BRYO
Length = 340
Score = 74.3 bits (181), Expect = 6e-12
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ K IFIDQLELP R YNCLK+ ++HT+ +LLN SQ+DLMKI++F + V+ +L LQ
Sbjct: 266 EVTFKHIFIDQLELPARAYNCLKRVNVHTISDLLNYSQDDLMKIKNFGKKSVEQVLEALQ 325
[152][TOP]
>UniRef100_Q539W2 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys lanuginosa
RepID=Q539W2_9POAL
Length = 339
Score = 74.3 bits (181), Expect = 6e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDLM+I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMEDRKHIWDTLE 325
[153][TOP]
>UniRef100_C3TSB3 RNA polymerase alpha subunit n=1 Tax=Pinus krempfii
RepID=C3TSB3_PINKR
Length = 335
Score = 74.3 bits (181), Expect = 6e-12
Identities = 36/66 (54%), Positives = 50/66 (75%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQLELP + YN L++++IHTLL+LLN S+EDLM+IEH E V+ +L +L+
Sbjct: 266 KIAFQHIFIDQLELPSKTYNSLRRANIHTLLDLLNYSREDLMRIEHLEKESVEQVLEVLR 325
Query: 395 IDKHFA 378
K FA
Sbjct: 326 --KRFA 329
[154][TOP]
>UniRef100_P93962 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
stoloniformis RepID=RPOA_PSAST
Length = 339
Score = 74.3 bits (181), Expect = 6e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDLM+I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMEDRKHIWDTLE 325
[155][TOP]
>UniRef100_Q7H6F6 DNA-directed RNA polymerase subunit alpha n=9 Tax=Triticeae
RepID=RPOA_PSAJU
Length = 339
Score = 74.3 bits (181), Expect = 6e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDLM+I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMEDRKHIWDTLE 325
[156][TOP]
>UniRef100_P92418 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
fragilis RepID=RPOA_PSAFR
Length = 339
Score = 74.3 bits (181), Expect = 6e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDLM+I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMEDRKHIWDTLE 325
[157][TOP]
>UniRef100_Q7H6J2 DNA-directed RNA polymerase subunit alpha n=8 Tax=Hordeum
RepID=RPOA_HORBU
Length = 339
Score = 74.3 bits (181), Expect = 6e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDLM+I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMEDRKHIWDTLE 325
[158][TOP]
>UniRef100_P92220 DNA-directed RNA polymerase subunit alpha n=1 Tax=Bromus inermis
RepID=RPOA_BROIN
Length = 339
Score = 74.3 bits (181), Expect = 6e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDLM+I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMEDRKHIWDTLE 325
[159][TOP]
>UniRef100_P93960 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
rupestris RepID=RPOA_PSARU
Length = 339
Score = 73.9 bits (180), Expect = 8e-12
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDLM+I+ FR+ED ++I + L+
Sbjct: 267 IPLNYIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMEDRKHIWDTLE 325
[160][TOP]
>UniRef100_Q5EG69 RNA polymerase alpha subunit n=1 Tax=Sphagnum fimbriatum
RepID=Q5EG69_9BRYO
Length = 338
Score = 73.6 bits (179), Expect = 1e-11
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ K IFIDQLELP R YNCLK+ D+HT+ +LL+ SQ+DLMKI++F + V+ +L LQ
Sbjct: 264 EMTFKHIFIDQLELPARAYNCLKRVDVHTISDLLSYSQDDLMKIKNFGKKSVEQVLEALQ 323
[161][TOP]
>UniRef100_Q7H6H4 RNA polymerase alpha subunit n=1 Tax=Elymus virginicus
RepID=Q7H6H4_9POAL
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[162][TOP]
>UniRef100_Q3Y512 RNA polymerase subunit a n=1 Tax=Elymus dentatus RepID=Q3Y512_9POAL
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[163][TOP]
>UniRef100_Q3Y511 RNA polymerase subunit a n=1 Tax=Elymus mutabilis
RepID=Q3Y511_9POAL
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[164][TOP]
>UniRef100_P92439 DNA-directed RNA polymerase subunit alpha n=3 Tax=Thinopyrum
RepID=RPOA_THIBE
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[165][TOP]
>UniRef100_P93964 DNA-directed RNA polymerase subunit alpha n=1 Tax=Secale strictum
RepID=RPOA_SECST
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDXFRMEDRKHIWDTLE 325
[166][TOP]
>UniRef100_Q8MAI6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lophopyrum
elongatum RepID=RPOA_LOPEL
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[167][TOP]
>UniRef100_P93956 DNA-directed RNA polymerase subunit alpha n=2 Tax=Triticeae
RepID=RPOA_FESSE
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[168][TOP]
>UniRef100_P93968 DNA-directed RNA polymerase subunit alpha n=1 Tax=Festucopsis
festucoides RepID=RPOA_FESFE
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[169][TOP]
>UniRef100_P93974 DNA-directed RNA polymerase subunit alpha n=2 Tax=Eremopyrum
RepID=RPOA_EREDI
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[170][TOP]
>UniRef100_Q8MAI8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Elymus hystrix
RepID=RPOA_ELYHY
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[171][TOP]
>UniRef100_Q7H6I5 DNA-directed RNA polymerase subunit alpha n=22 Tax=Triticeae
RepID=RPOA_ELYCA
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[172][TOP]
>UniRef100_P93993 DNA-directed RNA polymerase subunit alpha n=1 Tax=Australopyrum
velutinum RepID=RPOA_AUSVE
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[173][TOP]
>UniRef100_P92209 DNA-directed RNA polymerase subunit alpha n=3 Tax=Agropyron
RepID=RPOA_AGRCR
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[174][TOP]
>UniRef100_Q8MAJ0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aegilops
uniaristata RepID=RPOA_AEGUN
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[175][TOP]
>UniRef100_Q7GED9 DNA-directed RNA polymerase subunit alpha n=9 Tax=Triticeae
RepID=RPOA_AEGCM
Length = 339
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[176][TOP]
>UniRef100_B7T2T8 RNA polymerase alpha subunit n=1 Tax=Erodium chrysanthum
RepID=B7T2T8_9ROSI
Length = 329
Score = 72.8 bits (177), Expect = 2e-11
Identities = 34/57 (59%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Frame = -3
Query: 566 LKSIFIDQL-ELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNIL 399
LK I+IDQL EL PR+YN LK S IHT+++LL+K+ +DL+K+ HFR EDV+ ++NIL
Sbjct: 258 LKEIYIDQLVELSPRLYNILKGSGIHTVMDLLDKNPDDLLKLRHFRQEDVERVMNIL 314
[177][TOP]
>UniRef100_A2T365 DNA-directed RNA polymerase subunit alpha n=1 Tax=Angiopteris
evecta RepID=RPOA_ANGEV
Length = 341
Score = 72.8 bits (177), Expect = 2e-11
Identities = 34/60 (56%), Positives = 43/60 (71%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ K IFIDQLELP R YNCLKK D+HT+ +LL SQ+DL KI++F + V +L LQ
Sbjct: 267 EVAFKHIFIDQLELPARAYNCLKKVDVHTISDLLKYSQDDLRKIKNFGKKSVDQVLEALQ 326
[178][TOP]
>UniRef100_B3TN81 RNA polymerase alpha subunit (Fragment) n=1 Tax=Brachypodium
distachyon RepID=B3TN81_BRADI
Length = 338
Score = 72.4 bits (176), Expect = 2e-11
Identities = 35/59 (59%), Positives = 48/59 (81%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLELP R YN LK+++IHTLL+LL+K++EDLM+I+ FR+ED + I + L+
Sbjct: 267 IPLNFIFIDQLELPSRTYNYLKRANIHTLLDLLSKTEEDLMRIDSFRMEDGKQIWDTLE 325
[179][TOP]
>UniRef100_Q8MAI9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Leymus
californicus RepID=RPOA_ELYCL
Length = 339
Score = 72.4 bits (176), Expect = 2e-11
Identities = 34/59 (57%), Positives = 48/59 (81%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++EDLM+I+ F +ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFHMEDRKHIWDTLE 325
[180][TOP]
>UniRef100_Q539W1 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys lanuginosa
RepID=Q539W1_9POAL
Length = 339
Score = 71.6 bits (174), Expect = 4e-11
Identities = 34/59 (57%), Positives = 48/59 (81%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFI QLEL R YNCLK+++IHTLL+LL+K++EDLM+I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIXQLELTSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMEDRKHIWDTLE 325
[181][TOP]
>UniRef100_Q539W0 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys fragilis
subsp. secaliformis RepID=Q539W0_PSAFR
Length = 339
Score = 71.6 bits (174), Expect = 4e-11
Identities = 34/59 (57%), Positives = 48/59 (81%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L I IDQLEL R YNCLK+++IHTLL+LL+K++EDLM+I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIXIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMEDRKHIWDTLE 325
[182][TOP]
>UniRef100_Q60F85 DNA-dependent RNA polymerase alpha subunit n=1 Tax=Sphagnum
girgensohnii RepID=Q60F85_9BRYO
Length = 341
Score = 70.9 bits (172), Expect = 7e-11
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ K IFIDQLELP R YNC K+ D+HT+ +LL+ SQ+DLMKI++F + V+ +L LQ
Sbjct: 267 EMTFKHIFIDQLELPARAYNCPKRVDVHTISDLLSYSQDDLMKIKNFGKKSVEQVLEALQ 326
[183][TOP]
>UniRef100_Q5EFY2 RNA polymerase alpha subunit n=1 Tax=Polytrichum pallidisetum
RepID=Q5EFY2_9BRYO
Length = 338
Score = 70.9 bits (172), Expect = 7e-11
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI K IFIDQLELP R YNCLK+ + HT+ +LLN SQ+DLMKI++F + V+ +L L+
Sbjct: 264 EITFKHIFIDQLELPARAYNCLKRVNGHTISDLLNYSQDDLMKIKNFGKKSVEQVLEALE 323
[184][TOP]
>UniRef100_Q60F88 DNA-directed RNA polymerase subunit alpha n=1 Tax=Takakia
lepidozioides RepID=RPOA_TAKLE
Length = 341
Score = 70.9 bits (172), Expect = 7e-11
Identities = 33/59 (55%), Positives = 44/59 (74%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+ K IFIDQLELP R YNCLK+ + HT+ +LLN SQ+DLMKI++F + V+ +L LQ
Sbjct: 268 VTFKHIFIDQLELPARAYNCLKRVNAHTISDLLNYSQDDLMKIKNFGKKSVEQVLEALQ 326
[185][TOP]
>UniRef100_P92389 DNA-directed RNA polymerase subunit alpha n=1 Tax=Heteranthelium
piliferum RepID=RPOA_HETPI
Length = 339
Score = 70.1 bits (170), Expect = 1e-10
Identities = 33/59 (55%), Positives = 48/59 (81%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R NCLK+++IHTLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTXNCLKRANIHTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[186][TOP]
>UniRef100_Q2KKK3 RNA polymerase alpha subunit (Fragment) n=1 Tax=Polytrichadelphus
purpureus RepID=Q2KKK3_9BRYO
Length = 165
Score = 69.7 bits (169), Expect = 2e-10
Identities = 33/59 (55%), Positives = 44/59 (74%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNIL 399
EI K IFIDQLEL R YNCLK+ ++HT+ +LLN SQ+DLMKI++F + V+ +L L
Sbjct: 91 EITFKHIFIDQLELSARAYNCLKRVNVHTISDLLNYSQDDLMKIKNFGKKSVEQVLEAL 149
[187][TOP]
>UniRef100_P06270 DNA-directed RNA polymerase subunit alpha n=1 Tax=Marchantia
polymorpha RepID=RPOA_MARPO
Length = 340
Score = 69.3 bits (168), Expect = 2e-10
Identities = 30/60 (50%), Positives = 46/60 (76%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ K IFIDQLELP R YNCLKK ++HT+ +LL+ S++DL+KI++F + V+ +L L+
Sbjct: 267 DVAFKHIFIDQLELPARAYNCLKKVNVHTIADLLHYSEDDLIKIKNFGKKSVEQVLEALK 326
[188][TOP]
>UniRef100_Q5EFY4 RNA polymerase alpha subunit n=1 Tax=Dendroligotrichum dendroides
RepID=Q5EFY4_9BRYO
Length = 340
Score = 68.9 bits (167), Expect = 3e-10
Identities = 32/60 (53%), Positives = 43/60 (71%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
EI K IFIDQLELP R YNCLK+ ++H + +LLN Q+D MKI++F + V+ +L LQ
Sbjct: 266 EIKFKHIFIDQLELPARAYNCLKRVNVHPISDLLNYXQDDFMKIKNFGKKSVEQVLEALQ 325
[189][TOP]
>UniRef100_A9SHY0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SHY0_PHYPA
Length = 438
Score = 67.4 bits (163), Expect = 7e-10
Identities = 29/60 (48%), Positives = 47/60 (78%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ K +FIDQL+LP R YNCLK+++IHT+ +LL+ +Q+DLM+I++F + V+ +L L+
Sbjct: 367 EVTYKHVFIDQLKLPARAYNCLKRANIHTVSDLLDYTQDDLMRIKNFGKKSVEEVLEALR 426
[190][TOP]
>UniRef100_A9CP51 DNA-directed RNA polymerase alpha chain n=1 Tax=Physcomitrella
patens RepID=A9CP51_PHYPA
Length = 525
Score = 67.4 bits (163), Expect = 7e-10
Identities = 29/60 (48%), Positives = 47/60 (78%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ K +FIDQL+LP R YNCLK+++IHT+ +LL+ +Q+DLM+I++F + V+ +L L+
Sbjct: 454 EVTYKHVFIDQLKLPARAYNCLKRANIHTVSDLLDYTQDDLMRIKNFGKKSVEEVLEALR 513
[191][TOP]
>UniRef100_Q8WHZ1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psilotum nudum
RepID=RPOA_PSINU
Length = 340
Score = 67.0 bits (162), Expect = 1e-09
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ K IFIDQLELP R YNCLKK +HT+ +LL +Q DL K+++F + V+ ++ LQ
Sbjct: 266 EVAFKQIFIDQLELPARAYNCLKKMQVHTVSDLLKYTQYDLKKVKNFGNKSVEQVVEALQ 325
[192][TOP]
>UniRef100_B7T3F0 RNA polymerase alpha subunit n=1 Tax=Geranium macrorrhizum
RepID=B7T3F0_9ROSI
Length = 329
Score = 64.7 bits (156), Expect = 5e-09
Identities = 32/57 (56%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = -3
Query: 566 LKSIFIDQL-ELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNIL 399
LK I+IDQL ELP R Y CLK S I T+++LLNK+ +DL+KI F +DV+ ++NIL
Sbjct: 258 LKDIYIDQLVELPARFYKCLKGSGIDTVMDLLNKNTDDLIKITQFCQQDVEKVMNIL 314
[193][TOP]
>UniRef100_B0YPQ7 RNA polymerase alpha subunit n=1 Tax=Aneura mirabilis
RepID=B0YPQ7_ANEMR
Length = 342
Score = 64.3 bits (155), Expect = 6e-09
Identities = 28/60 (46%), Positives = 43/60 (71%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ K IFIDQLELP R YNCLK+ ++HT+ +LL+ + DLMKI++F E ++ + L+
Sbjct: 268 DVAPKHIFIDQLELPARAYNCLKRVNVHTVADLLDYGENDLMKIKNFGKESIKQVSEALK 327
[194][TOP]
>UniRef100_P92225 DNA-directed RNA polymerase subunit alpha n=1 Tax=Crithopsis
delileana RepID=RPOA_CRIDE
Length = 339
Score = 64.3 bits (155), Expect = 6e-09
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I L IFIDQLEL R YNC K+ TLL+LL+K++EDL++I+ FR+ED ++I + L+
Sbjct: 267 IPLNCIFIDQLELTSRTYNCXKRXXXXTLLDLLSKTEEDLLRIDSFRMEDRKHIWDTLE 325
[195][TOP]
>UniRef100_Q1ACG7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chara vulgaris
RepID=RPOA_CHAVU
Length = 358
Score = 64.3 bits (155), Expect = 6e-09
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQI 393
+G K I I+QLEL R YNCLK I TL +LLN SQEDL+KI++F + ++N L
Sbjct: 269 LGWKKISINQLELSARAYNCLKNEKISTLFDLLNYSQEDLLKIKNFGKRSFEQVVNAL-- 326
Query: 392 DKHF 381
+KHF
Sbjct: 327 EKHF 330
[196][TOP]
>UniRef100_C5HY86 RNA polymerase a-subunit n=1 Tax=Alsophila spinulosa
RepID=C5HY86_9FILI
Length = 338
Score = 62.8 bits (151), Expect = 2e-08
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = -3
Query: 566 LKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNIL 399
L++ FIDQLE P R +NCLK+++IHT+ +LLN S+EDL+KI+ F + V + L
Sbjct: 267 LRNTFIDQLESPARAFNCLKRAEIHTITDLLNHSREDLLKIKSFGKKSVDQVSRAL 322
[197][TOP]
>UniRef100_Q5SD25 DNA-directed RNA polymerase subunit alpha n=1 Tax=Huperzia lucidula
RepID=RPOA_HUPLU
Length = 336
Score = 62.8 bits (151), Expect = 2e-08
Identities = 29/60 (48%), Positives = 45/60 (75%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
++ + IFI+QLEL P+ YN LKK ++HT+ +LL+ SQ+DLMK+++F + V+ IL LQ
Sbjct: 269 KVTFQHIFIEQLELSPKAYNFLKKINVHTISDLLDYSQDDLMKMKNFGKKSVEQILEALQ 328
[198][TOP]
>UniRef100_B1VKC7 RNA polymerase alpha subunit n=1 Tax=Cryptomeria japonica
RepID=B1VKC7_CRYJA
Length = 342
Score = 62.4 bits (150), Expect = 2e-08
Identities = 28/59 (47%), Positives = 42/59 (71%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
I ++IDQL R+YNCLKK++I+T+ +LLN S+EDLMKI+H + V+ IL ++
Sbjct: 273 IAFDQMYIDQLNFSTRVYNCLKKANINTVSDLLNYSREDLMKIKHLGEQSVKEILEFIR 331
[199][TOP]
>UniRef100_C3W150 RNA polymerase alpha subunit n=1 Tax=Pinus leiophylla var.
chihuahuana RepID=C3W150_PINLE
Length = 335
Score = 62.0 bits (149), Expect = 3e-08
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+I + IFIDQL L++++IHTLL+LLN S+EDLM+IEHF E V+ +L +LQ
Sbjct: 266 KIAFQLIFIDQLXXXXXXXXXLRRANIHTLLDLLNYSREDLMRIEHFGKESVEQVLEVLQ 325
[200][TOP]
>UniRef100_Q32RU7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Staurastrum
punctulatum RepID=RPOA_STAPU
Length = 383
Score = 60.5 bits (145), Expect = 9e-08
Identities = 27/59 (45%), Positives = 46/59 (77%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+ +++ ID+LEL PRI NCLKK++I+T+ +LLN +QEDL+KI++F + V+ + +L+
Sbjct: 314 VNKENLSIDELELSPRISNCLKKANINTIADLLNYTQEDLLKIKNFGRKSVEQVSLVLR 372
[201][TOP]
>UniRef100_Q9BBN0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Marsilea
quadrifolia RepID=RPOA_MARQU
Length = 341
Score = 60.1 bits (144), Expect = 1e-07
Identities = 26/55 (47%), Positives = 41/55 (74%)
Frame = -3
Query: 563 KSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNIL 399
K+ FIDQLELP R +NCLK+++IHT+ +LL+ S++DL+K++ F + V + L
Sbjct: 268 KNTFIDQLELPARAFNCLKRAEIHTISDLLSYSRDDLLKLKSFGKKSVDQVSRAL 322
[202][TOP]
>UniRef100_Q85FJ1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Adiantum
capillus-veneris RepID=RPOA_ADICA
Length = 345
Score = 59.7 bits (143), Expect = 2e-07
Identities = 27/56 (48%), Positives = 42/56 (75%)
Frame = -3
Query: 566 LKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNIL 399
L++ FIDQLELP R +NCLK+++I+T+ +LLN S+EDL K+++F + V + L
Sbjct: 271 LENRFIDQLELPARAFNCLKRAEIYTIADLLNYSREDLSKLKNFGRKSVDQVSEAL 326
[203][TOP]
>UniRef100_Q539V6 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys caduca
RepID=Q539V6_9POAL
Length = 339
Score = 56.6 bits (135), Expect = 1e-06
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -3
Query: 572 IGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQED 456
I L IFIDQLEL R YNCLK+++IHTLL+LL+K++ED
Sbjct: 267 IPLNCIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEED 305
[204][TOP]
>UniRef100_P60315 DNA-directed RNA polymerase subunit alpha, chloroplastic n=2
Tax=Physcomitrella patens RepID=RPOA_PHYPA
Length = 450
Score = 56.6 bits (135), Expect = 1e-06
Identities = 24/60 (40%), Positives = 44/60 (73%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E+ L+ +++DQL +P + YN LK+++I+T+ +LL+ +Q+DL+ I +F + V +IL LQ
Sbjct: 376 EVDLRHVYVDQLRIPSKAYNSLKRANINTVSDLLDYTQDDLLSIPNFGRKSVDDILEALQ 435
[205][TOP]
>UniRef100_A7KVR0 RNA polymerase alpha subunit (Fragment) n=1 Tax=Olea europaea
RepID=A7KVR0_OLEEU
Length = 280
Score = 55.8 bits (133), Expect = 2e-06
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLN 471
+I LKSIFIDQ E PR+YNCLK+S+I+TLL+LLN
Sbjct: 240 KIALKSIFIDQSEFSPRVYNCLKRSNIYTLLDLLN 274
[206][TOP]
>UniRef100_A6MW22 DNA-directed RNA polymerase subunit alpha n=1 Tax=Rhodomonas salina
RepID=RPOA_RHDSA
Length = 314
Score = 55.5 bits (132), Expect = 3e-06
Identities = 23/57 (40%), Positives = 42/57 (73%)
Frame = -3
Query: 566 LKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+ I I++L+L R YNCLK++ IH++ +LL+ SQEDL++I++F + + +++ LQ
Sbjct: 242 INQILIEELQLSVRAYNCLKRAQIHSVADLLDYSQEDLIEIKNFGQKSAEEVIDALQ 298
[207][TOP]
>UniRef100_Q01569 DNA-directed RNA polymerase subunit alpha n=1 Tax=Pyrenomonas
salina RepID=RPOA_PYRSA
Length = 314
Score = 55.5 bits (132), Expect = 3e-06
Identities = 23/57 (40%), Positives = 42/57 (73%)
Frame = -3
Query: 566 LKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+ I I++L+L R YNCLK++ IH++ +LL+ SQEDL++I++F + + +++ LQ
Sbjct: 242 INQILIEELQLSVRAYNCLKRAQIHSVADLLDYSQEDLIEIKNFGQKSAEEVIDALQ 298
[208][TOP]
>UniRef100_Q9MUV0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Mesostigma viride
RepID=RPOA_MESVI
Length = 316
Score = 55.1 bits (131), Expect = 4e-06
Identities = 24/60 (40%), Positives = 40/60 (66%)
Frame = -3
Query: 575 EIGLKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
E + I +++LEL R YNCLK++ IHT+ +LL SQEDL++I++F + ++ L+
Sbjct: 245 ESKINDILVEELELSVRAYNCLKRAQIHTISDLLAYSQEDLLEIKNFGRRSAEEVIEALE 304
[209][TOP]
>UniRef100_C4GC01 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles
DSM 14600 RepID=C4GC01_9FIRM
Length = 320
Score = 54.7 bits (130), Expect = 5e-06
Identities = 25/57 (43%), Positives = 41/57 (71%)
Frame = -3
Query: 566 LKSIFIDQLELPPRIYNCLKKSDIHTLLELLNKSQEDLMKIEHFRVEDVQNILNILQ 396
+K + ID+LEL R YNCLK++ I+T+ EL+NK+ ED+MK+ + + ++ +L LQ
Sbjct: 252 MKMMNIDELELSVRSYNCLKRAGINTVEELVNKTPEDMMKVRNLGRKSLEEVLQKLQ 308