BB917076 ( RCE22611 )

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[1][TOP]
>UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6TFU4_SOYBN
          Length = 208

 Score =  242 bits (617), Expect = 2e-62
 Identities = 132/190 (69%), Positives = 152/190 (80%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3   THFNFHTNLLRLSSYSSSHPSQ-FSSKTKLPSTTFLTGGSTSQLLKFKHATATTTTKRRG 179
           T FNF++ L R S Y    PS  +   +   STTFL       ++  K+A AT+T+ R  
Sbjct: 3   TLFNFNSTL-RPSCYLPLSPSSSYPHFSNTLSTTFL-----GHIVTLKYA-ATSTSNRGR 55

Query: 180 TASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRG 359
           + S  MSWDGPLSSVKLIIQG+N+EL+DAVK+HVEDKVG+ +QKHS+LVREVDVRLS RG
Sbjct: 56  SLSTRMSWDGPLSSVKLIIQGKNLELTDAVKRHVEDKVGKAVQKHSHLVREVDVRLSIRG 115

Query: 360 GGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG 539
           GGEFGRGPRTRRCEVTL+TKRHGVVRAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHG
Sbjct: 116 GGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHG 175

Query: 540 RHMKGPNRLK 569
           RHMKG NRLK
Sbjct: 176 RHMKGFNRLK 185

[2][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6T7E3_SOYBN
          Length = 291

 Score =  240 bits (613), Expect = 5e-62
 Identities = 132/192 (68%), Positives = 149/192 (77%)
 Frame = +3

Query: 3   THFNFHTNLLRLSSYSSSHPSQFSSKTKLPSTTFLTGGSTSQLLKFKHATATTTTKRRGT 182
           T FNF++ L     + SS  S +    K  STTFL  G T  L   K+A  + +   R +
Sbjct: 3   TLFNFNSTLRPSCYHPSSPSSSYPHFFKTLSTTFL--GHTVTL---KYAATSASIPPR-S 56

Query: 183 ASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGG 362
            S  MSWDGPLSSVKL IQG+N+EL+DAVKQHVEDKVG+ +QKHS+LVREVDVRLS RGG
Sbjct: 57  LSAHMSWDGPLSSVKLTIQGKNLELTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGG 116

Query: 363 GEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 542
           GEFGRGPRTRRCEVTL+TKRHGVVRAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGR
Sbjct: 117 GEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGR 176

Query: 543 HMKGPNRLKFSE 578
           HMKG NRLK  E
Sbjct: 177 HMKGFNRLKVRE 188

[3][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI0001984F94
          Length = 298

 Score =  220 bits (560), Expect = 7e-56
 Identities = 114/177 (64%), Positives = 140/177 (79%)
 Frame = +3

Query: 39  SSYSSSHPSQFSSKTKLPSTTFLTGGSTSQLLKFKHATATTTTKRRGTASISMSWDGPLS 218
           S YSSS  +   S   L + +  +GGS+  +LK        TT++    ++ MSWDGPLS
Sbjct: 24  SPYSSSFLASSKSLRSLSNLSSSSGGSS--ILKLN-----ATTRQTKPLAVRMSWDGPLS 76

Query: 219 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 398
           SVKLI+QG+N+EL+D V+ HVE+KVG+ +QKHS+LVREVDVRLS RGG E G+GP+ RRC
Sbjct: 77  SVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGG-ELGKGPKIRRC 135

Query: 399 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK 569
           EVTL+TK+HGVVRAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG NRLK
Sbjct: 136 EVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLK 192

[4][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
          Length = 306

 Score =  219 bits (558), Expect = 1e-55
 Identities = 113/177 (63%), Positives = 133/177 (75%)
 Frame = +3

Query: 48  SSSHPSQFSSKTKLPSTTFLTGGSTSQLLKFKHATATTTTKRRGTASISMSWDGPLSSVK 227
           S +  S  S+KT++P ++  +      +   +      T    G  S+ MSWDGPL SVK
Sbjct: 28  SLASSSVISTKTQIPKSSLKSSFLGKNMSFIELGRTARTPLTHGGCSVKMSWDGPLHSVK 87

Query: 228 LIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT 407
           LIIQG+N+EL+D VK+HVEDKVG+ +QKHS+LVREVDVRLS RGG E G+GPR RRCEVT
Sbjct: 88  LIIQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGG-ELGKGPRIRRCEVT 146

Query: 408 LYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 578
           L+T RHGVVRAEE AET Y SIDLVSSIIQRKLRKIKEKE+DHGRHMKG NRLK  E
Sbjct: 147 LFTNRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVRE 203

[5][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
           Tax=Ricinus communis RepID=B9SEK8_RICCO
          Length = 311

 Score =  215 bits (547), Expect = 2e-54
 Identities = 111/169 (65%), Positives = 131/169 (77%)
 Frame = +3

Query: 72  SSKTKLPSTTFLTGGSTSQLLKFKHATATTTTKRRGTASISMSWDGPLSSVKLIIQGRNM 251
           S K +LPS +  +  S    LK          KR   +++ MSW+GPLSSVKLI QG+N+
Sbjct: 38  SKKLRLPSFSLSSKTSFLNPLKLGSNVKYFENKRGRRSAVRMSWEGPLSSVKLITQGKNL 97

Query: 252 ELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 431
           EL+D VK+HVEDKVG+ +QKHS+LVREVDVRLS RGG EFG+GP+ RRCEVTL+TK+HGV
Sbjct: 98  ELTDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGG-EFGKGPKIRRCEVTLFTKKHGV 156

Query: 432 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 578
           +RAEE AET Y SIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK  E
Sbjct: 157 IRAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVRE 205

[6][TOP]
>UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJW3_9ROSI
          Length = 268

 Score =  211 bits (537), Expect = 3e-53
 Identities = 120/196 (61%), Positives = 142/196 (72%), Gaps = 5/196 (2%)
 Frame = +3

Query: 6   HFNFHTNLLRLSSYSS--SHPSQF--SSKTKLPSTTFLTGGSTSQLLKFKHATATTTTK- 170
           H +F+  +  L+S +   S  S F  S+KT++P   FL      + + F      T    
Sbjct: 9   HASFNNRIAPLTSTTPTPSLASSFVNSTKTQVPKV-FLKSRFLGKNVNFAEIRRKTKIPL 67

Query: 171 RRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS 350
             G +SI MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS
Sbjct: 68  SHGGSSIRMSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLS 127

Query: 351 TRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 530
            RGG E G+GPR RRCEVTL+TKRHGVVRAEE AET Y SIDL SSIIQRKLRKIK+KE+
Sbjct: 128 VRGG-ELGKGPRIRRCEVTLFTKRHGVVRAEEDAETIYASIDLASSIIQRKLRKIKDKES 186

Query: 531 DHGRHMKGPNRLKFSE 578
           DHGRHMKG NRLK  E
Sbjct: 187 DHGRHMKGFNRLKVRE 202

[7][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
           thaliana RepID=Q9FLV3_ARATH
          Length = 365

 Score =  210 bits (535), Expect = 6e-53
 Identities = 102/135 (75%), Positives = 120/135 (88%)
 Frame = +3

Query: 174 RGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLST 353
           R + ++ MSWDGPL+SVKLIIQG+N+ELS+ +KQHVE+KVG+ +QKHS+LVREVDVRLS 
Sbjct: 123 RSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSV 182

Query: 354 RGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
           RGG EFG+GPR RRCEVTL+TK+HGVVRAEE AET Y  IDLVS+IIQRKLRKIKEK++D
Sbjct: 183 RGG-EFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSD 241

Query: 534 HGRHMKGPNRLKFSE 578
           HGRHMKG NRLK  E
Sbjct: 242 HGRHMKGFNRLKVRE 256

[8][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PHY3_POPTR
          Length = 306

 Score =  210 bits (534), Expect = 7e-53
 Identities = 120/196 (61%), Positives = 142/196 (72%), Gaps = 5/196 (2%)
 Frame = +3

Query: 6   HFNFHTNLLRLSSYSS--SHPSQF--SSKTKLPSTTFLTGGSTSQLLKFKHATATTTTK- 170
           H  F+  +  L+S +   S  S F  S+KT++P   FL      + + F      T    
Sbjct: 9   HAGFNNRIAPLTSTTPTPSLASSFVNSTKTQVPKV-FLKSRFLGKNVNFVEIRRKTKIPL 67

Query: 171 RRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS 350
             G +SI MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS
Sbjct: 68  SHGGSSIRMSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLS 127

Query: 351 TRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 530
            RGG E G+GPR RRCEVTL+TKRHGVVRAEE AET + SIDLVSSIIQRKLRKIK+KE+
Sbjct: 128 VRGG-ELGKGPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKES 186

Query: 531 DHGRHMKGPNRLKFSE 578
           DHGRHMKG NRLK  E
Sbjct: 187 DHGRHMKGFNRLKVRE 202

[9][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7QEV5_VITVI
          Length = 230

 Score =  209 bits (531), Expect = 2e-52
 Identities = 100/125 (80%), Positives = 116/125 (92%)
 Frame = +3

Query: 195 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 374
           MSWDGPLSSVKLI+QG+N+EL+D V+ HVE+KVG+ +QKHS+LVREVDVRLS RGG E G
Sbjct: 1   MSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGG-ELG 59

Query: 375 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 554
           +GP+ RRCEVTL+TK+HGVVRAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG
Sbjct: 60  KGPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKG 119

Query: 555 PNRLK 569
            NRLK
Sbjct: 120 FNRLK 124

[10][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
           RepID=Q672Q2_SOLLC
          Length = 311

 Score =  202 bits (515), Expect = 1e-50
 Identities = 110/193 (56%), Positives = 139/193 (72%), Gaps = 4/193 (2%)
 Frame = +3

Query: 3   THFNFHTNLLRLSSYSSSHPSQFSSKTKLPSTTFLTGGSTSQLLK--FKHATATTTTKRR 176
           T  + H+     SSYSSS P+     T  P+ +     + S+ L   FK        + R
Sbjct: 13  TFHSLHSYPNGSSSYSSSCPA-----TASPALSLTLSSTNSRFLNSAFKMNEINVPVRNR 67

Query: 177 GTAS--ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS 350
            T S  + MSWDGPLSSVKLI+QG+N+EL+ AVK +VE+K+G+ +QKHS+L REVDVRLS
Sbjct: 68  VTKSFGVRMSWDGPLSSVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLS 127

Query: 351 TRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 530
            RGG E G+GP+ RRCEVTL+TK+HGV+RAEE  E+ YGSID+VSSIIQRKLRKIKEK++
Sbjct: 128 VRGG-ELGKGPKIRRCEVTLFTKKHGVIRAEEDGESIYGSIDMVSSIIQRKLRKIKEKDS 186

Query: 531 DHGRHMKGPNRLK 569
           D GRHMKG +RLK
Sbjct: 187 DRGRHMKGFDRLK 199

[11][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
          Length = 231

 Score =  202 bits (515), Expect = 1e-50
 Identities = 102/128 (79%), Positives = 114/128 (89%)
 Frame = +3

Query: 195 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 374
           MSWDGPLSSVKLIIQG+++ELSD VK+HVEDKVG+ +QK S+LVR VDVRLS RGG E G
Sbjct: 1   MSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELG 59

Query: 375 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 554
           +GPR RRCEVTL+TKRHGVVRAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG
Sbjct: 60  KGPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKG 119

Query: 555 PNRLKFSE 578
            NRLK  E
Sbjct: 120 FNRLKVRE 127

[12][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
           RepID=C9EFD1_SOLTU
          Length = 280

 Score =  198 bits (504), Expect = 2e-49
 Identities = 103/167 (61%), Positives = 127/167 (76%), Gaps = 4/167 (2%)
 Frame = +3

Query: 81  TKLPSTTFLTGGSTSQLLK--FKHATATTTTKRRGTAS--ISMSWDGPLSSVKLIIQGRN 248
           T  P+ +     S S  L   FK        + R   S  + MSWDGPLSSVKLI+QG+N
Sbjct: 6   TASPAFSLTLSSSNSGFLNSAFKKNEINVPVRNRVKXSFGVRMSWDGPLSSVKLILQGKN 65

Query: 249 MELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 428
           +EL+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E G+GP+ RRCEVTL+TK+HG
Sbjct: 66  LELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-ELGKGPKIRRCEVTLFTKKHG 124

Query: 429 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK 569
           V+RAEE AE+ YGSID+VSSIIQRKLRKIKEK++DHGRHMKG +RLK
Sbjct: 125 VIRAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLK 171

[13][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
           RepID=RR30_SPIOL
          Length = 302

 Score =  197 bits (501), Expect = 5e-49
 Identities = 110/183 (60%), Positives = 129/183 (70%)
 Frame = +3

Query: 21  TNLLRLSSYSSSHPSQFSSKTKLPSTTFLTGGSTSQLLKFKHATATTTTKRRGTASISMS 200
           TN L  S   SS P+  SS      +TF    S    L    A  +    R     + MS
Sbjct: 16  TNSLSNSINLSSTPTNLSSLR----STFTNSCS----LGLNVAVKSVQISRNKPNVVCMS 67

Query: 201 WDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRG 380
           WDGPLSSVKLI+QGRN+E+SD V+ HVEDKVG+ + KHS+LVREVDVRLS RGG +  +G
Sbjct: 68  WDGPLSSVKLILQGRNLEVSDNVRSHVEDKVGKSVAKHSHLVREVDVRLSARGG-DLSKG 126

Query: 381 PRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN 560
           P+ RRCEVTL+TKRHGV+RAEE AE+ Y SIDLVSSIIQRKLRKIK+K +DHGRHMKG N
Sbjct: 127 PKLRRCEVTLFTKRHGVIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHMKGFN 186

Query: 561 RLK 569
           R K
Sbjct: 187 RSK 189

[14][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
          Length = 309

 Score =  179 bits (455), Expect = 1e-43
 Identities = 88/130 (67%), Positives = 109/130 (83%)
 Frame = +3

Query: 165 TKRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 344
           ++R    S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR
Sbjct: 62  SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121

Query: 345 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           LS RGG E  RGP+  RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK
Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180

Query: 525 ETDHGRHMKG 554
           ETD  RH+KG
Sbjct: 181 ETD-VRHLKG 189

[15][TOP]
>UniRef100_Q10AC8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative,
           expressed n=1 Tax=Oryza sativa Japonica Group
           RepID=Q10AC8_ORYSJ
          Length = 241

 Score =  179 bits (455), Expect = 1e-43
 Identities = 88/130 (67%), Positives = 109/130 (83%)
 Frame = +3

Query: 165 TKRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 344
           ++R    S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR
Sbjct: 62  SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121

Query: 345 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           LS RGG E  RGP+  RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK
Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180

Query: 525 ETDHGRHMKG 554
           ETD  RH+KG
Sbjct: 181 ETD-VRHLKG 189

[16][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
           RepID=C6YXL0_ORYSJ
          Length = 321

 Score =  179 bits (455), Expect = 1e-43
 Identities = 88/130 (67%), Positives = 109/130 (83%)
 Frame = +3

Query: 165 TKRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVR 344
           ++R    S+ MSWDGPLSSV+LI+QGRN++L++ VK+H+E+K GR + KHS LV+EVDVR
Sbjct: 62  SRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVR 121

Query: 345 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           LS RGG E  RGP+  RCE+TL+TKRHGV+RAEE AE+TY SIDL SSII+RKLRKIKEK
Sbjct: 122 LSARGG-ELSRGPKICRCEITLFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEK 180

Query: 525 ETDHGRHMKG 554
           ETD  RH+KG
Sbjct: 181 ETD-VRHLKG 189

[17][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
           bicolor RepID=C5WRX8_SORBI
          Length = 310

 Score =  179 bits (455), Expect = 1e-43
 Identities = 87/129 (67%), Positives = 110/129 (85%)
 Frame = +3

Query: 168 KRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRL 347
           +RR + S+ M+WDGPLSSV+LI+QGRN++LSD +K+H+EDKVGR + KH +LVREVDVRL
Sbjct: 54  RRRVSFSVRMAWDGPLSSVRLIMQGRNVKLSDKLKEHIEDKVGRAVSKHCHLVREVDVRL 113

Query: 348 STRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 527
           S R GGE GRGP+T RCE+TL++KRHGV+RAEE AE+TY SIDL ++II+RKLRKIKEKE
Sbjct: 114 SAR-GGELGRGPKTSRCEITLFSKRHGVLRAEEDAESTYASIDLAAAIIKRKLRKIKEKE 172

Query: 528 TDHGRHMKG 554
           T+  R   G
Sbjct: 173 TEVRRDGDG 181

[18][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
           RepID=B6TYP8_MAIZE
          Length = 309

 Score =  178 bits (451), Expect = 3e-43
 Identities = 84/124 (67%), Positives = 107/124 (86%)
 Frame = +3

Query: 162 TTKRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDV 341
           T +RR + S+ M+WDGPLSSV+LI+Q RN +LS+ +K+H+EDKVGR + KH +LVREVDV
Sbjct: 52  TRRRRVSVSVRMAWDGPLSSVRLIMQSRNAKLSEKLKEHIEDKVGRAVSKHCHLVREVDV 111

Query: 342 RLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE 521
           RLS RGG E GRGP+T RCE+TL+TKRHGV+RAEE AE+TY SIDL ++I++RKLRKIKE
Sbjct: 112 RLSARGG-ELGRGPKTSRCEITLFTKRHGVLRAEEDAESTYASIDLAAAIVKRKLRKIKE 170

Query: 522 KETD 533
           KET+
Sbjct: 171 KETE 174

[19][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=B8LMC5_PICSI
          Length = 321

 Score =  175 bits (443), Expect = 3e-42
 Identities = 90/149 (60%), Positives = 113/149 (75%)
 Frame = +3

Query: 132 LKFKHATATTTTKRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQK 311
           L++K +     T  RG  + ++ W GPLSSV+LIIQG+N +L+DAVK ++E+KVG  +QK
Sbjct: 59  LRWKFSVCPIVTSSRGQINCTL-WSGPLSSVRLIIQGKNFQLTDAVKAYIEEKVGIAVQK 117

Query: 312 HSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSI 491
           H+ LVREVDVRLS RGG E G+GP+ RRCEVTL+TK+HGVVRAEE AET Y SID+VS I
Sbjct: 118 HANLVREVDVRLSIRGG-EVGKGPKIRRCEVTLFTKKHGVVRAEEEAETIYASIDIVSDI 176

Query: 492 IQRKLRKIKEKETDHGRHMKGPNRLKFSE 578
           I+RKLRKIKEK+  HGR  K   + K  E
Sbjct: 177 IRRKLRKIKEKDGGHGRPSKMRKQPKLGE 205

[20][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TA00_PHYPA
          Length = 297

 Score =  157 bits (396), Expect = 7e-37
 Identities = 77/132 (58%), Positives = 101/132 (76%)
 Frame = +3

Query: 171 RRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS 350
           ++G  +  M+W G L+ V+L+IQG+++EL+DA+KQ+VE+KVG  +   S LV+EVDVR+S
Sbjct: 71  QKGRVTTCMAWGGTLAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMS 130

Query: 351 TRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKET 530
            RGG E GRG R +RCEVTL+TK+HGVVRAEE AE+ Y SID VS +I RKLRKIKEK+ 
Sbjct: 131 VRGG-ETGRGERLQRCEVTLFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDG 189

Query: 531 DHGRHMKGPNRL 566
            HGR  K   R+
Sbjct: 190 GHGRPAKYSPRI 201

[21][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RWK9_PHYPA
          Length = 221

 Score =  153 bits (386), Expect = 1e-35
 Identities = 75/128 (58%), Positives = 98/128 (76%)
 Frame = +3

Query: 195 MSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFG 374
           M+W G L+ V+L+IQG+++EL+DA+KQ+VE+KVG  +   S LV+EVDVR+S RGG E G
Sbjct: 1   MAWGGALAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGG-ETG 59

Query: 375 RGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 554
           RG + +RCEVTL+TK+HGVVRAEE AE+ Y SID VS +I RKLRKIKEK+  HGR  K 
Sbjct: 60  RGGKLQRCEVTLFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPTKS 119

Query: 555 PNRLKFSE 578
            +  +  E
Sbjct: 120 RHSPRIGE 127

[22][TOP]
>UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR
          Length = 127

 Score =  138 bits (347), Expect = 3e-31
 Identities = 73/110 (66%), Positives = 86/110 (78%)
 Frame = +3

Query: 249 MELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 428
           M+L+D VK+HVEDKVG+ +QK S+LVREVD RLS R GGE G+GPR R+C       RHG
Sbjct: 1   MQLTDTVKEHVEDKVGKAVQKFSHLVREVDARLSVR-GGELGKGPRIRKC-------RHG 52

Query: 429 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 578
           VVRAEE +ET Y +IDLV SIIQ KLRK+KE E+DHGRHMKG NRLK  +
Sbjct: 53  VVRAEEDSETIYATIDLVLSIIQSKLRKMKE-ESDHGRHMKGLNRLKIRD 101

[23][TOP]
>UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8J8B2_CHLRE
          Length = 286

 Score =  103 bits (256), Expect = 1e-20
 Identities = 54/131 (41%), Positives = 78/131 (59%)
 Frame = +3

Query: 147 ATATTTTKRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLV 326
           A   T   R G    + S      +V++IIQGR + ++DA+K +VE+KV + +   S+ +
Sbjct: 45  AVVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTL 104

Query: 327 REVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKL 506
           +EVDV LS RGG     G + ++ EVT+YT R+GVVR E+     Y +IDLV   I+ KL
Sbjct: 105 KEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKL 164

Query: 507 RKIKEKETDHG 539
           +KIKEK    G
Sbjct: 165 QKIKEKAISRG 175

[24][TOP]
>UniRef100_Q5MCR1 Chloroplast-specific ribosome-associated protein n=1 Tax=Volvox
           carteri f. nagariensis RepID=Q5MCR1_VOLCA
          Length = 232

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 46/109 (42%), Positives = 75/109 (68%)
 Frame = +3

Query: 216 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR 395
           S+V++IIQGR + +++A+K++VE+KV + IQ  ++ ++EVDV LS RGG     G + ++
Sbjct: 72  STVRIIIQGRKLPVTNAIKEYVEEKVAKAIQNFAHTLKEVDVTLSARGGDTGTHGKKEQK 131

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 542
            +VT++T R+GVVR E+     Y +IDLV   I+ KL ++KEK    G+
Sbjct: 132 VDVTIFTLRNGVVRVEDRESNLYAAIDLVCDKIRSKLTRVKEKAITKGK 180

[25][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
          Length = 284

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/106 (44%), Positives = 78/106 (73%), Gaps = 2/106 (1%)
 Frame = +3

Query: 216 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHS-YLVREVDVRLSTRGGGEFGR-GPRT 389
           +S K+I+QGR++E++D+++++ E+K+ + +     + VREVDVR S+RGG +    G   
Sbjct: 78  ASTKVIVQGRHLEITDSIREYAEEKINKAVAHFDQHDVREVDVRCSSRGGADKKTPGGAL 137

Query: 390 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 527
           ++ EVT+YT R+G++R+EE A+  Y SID VS  ++RKLRK+KEK+
Sbjct: 138 QKTEVTVYT-RNGIIRSEEEADDLYASIDAVSDKLERKLRKVKEKK 182

[26][TOP]
>UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N7A9_9CHLO
          Length = 245

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 53/138 (38%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
 Frame = +3

Query: 117 STSQLLKFKHATATTTTKRRGTASISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVG 296
           +T + L+ +   +T  +  R + + +M+   P    K+I+QGR++E+++A++ + E K+ 
Sbjct: 13  TTPRALRGRSLASTRVSSVRASGARAMA--APAKGTKVIVQGRHLEITEAIRDYCEQKIN 70

Query: 297 RVIQKHS-YLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSI 473
           + +     + VREVDV  S R   E  +G   +  +VT+YT R+GVVR+EE A+  Y SI
Sbjct: 71  KAVSHFDMHDVREVDVTCSARS--EKQQGGDLQMTQVTVYT-RNGVVRSEEEADNLYASI 127

Query: 474 DLVSSIIQRKLRKIKEKE 527
           D VS  I+RKLRKIKEK+
Sbjct: 128 DAVSDKIERKLRKIKEKK 145

[27][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
          Length = 209

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 392
           +KL+I G+N+E++DA++ +V+ K+ +       L  E+DV LS        R PR    +
Sbjct: 1   MKLVIHGKNIEITDAIRDYVQQKIEKAANHFQNLTTEIDVHLSV------ARNPRINPKQ 54

Query: 393 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD-HGRHMKGP 557
             EVT+YT    V+RAEE +E  Y SIDLVS  I R+LRK KE+  D H R  + P
Sbjct: 55  TAEVTIYTNG-SVIRAEESSENLYASIDLVSDKIARQLRKFKERRQDKHSRSKEEP 109

[28][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
           RepID=B0CDL4_ACAM1
          Length = 212

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TR 392
           +KL+I G+N+E++DA++++V  K+ +    +  L  E+DV LS        R PR    +
Sbjct: 1   MKLVIHGKNIEITDAIREYVHQKIEKAANHYQNLTTEIDVHLSV------ARNPRITTKQ 54

Query: 393 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 563
             EVTL+     V+RAEE +E  Y SIDLV+  I R+LRK KEK     R  KGPN+
Sbjct: 55  TAEVTLFV-NGSVIRAEESSENLYASIDLVADKIARQLRKYKEK-----RQTKGPNK 105

[29][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
           azollae' 0708 RepID=B9YPU1_ANAAZ
          Length = 214

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---R 392
           +KL+I G+N+E++DA++++V  K+ R +     +  EV+V LS        R PR    +
Sbjct: 1   MKLVIHGKNIEITDAIREYVHQKIERAVNHFQSITNEVNVHLSV------ARNPRISTKQ 54

Query: 393 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
             EVT+Y     V+RAEE +E  Y SIDLV+  I R+LRK KE+  DH
Sbjct: 55  AAEVTIYANG-SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDH 101

[30][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Microcoleus chthonoplastes PCC 7420
           RepID=B4VJW0_9CYAN
          Length = 215

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TR 392
           +KL+IQG+N+E++D+++++V  K+ + +     +  EVDV LS        R PR    +
Sbjct: 1   MKLVIQGKNIEITDSIREYVNQKIEKAVNHFQNMTTEVDVHLSV------ARNPRINTKQ 54

Query: 393 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE 527
             EVT+Y  +  V+RA+E +E  Y SIDLV+  IQR+LRK KEK+
Sbjct: 55  TAEVTIYANK-TVIRAQESSEDLYASIDLVADKIQRQLRKYKEKQ 98

[31][TOP]
>UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
           CC9311 RepID=Q0ICJ8_SYNS3
          Length = 191

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 44/108 (40%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +KL+I GRN++++ A++++ E K+ R I     LV+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLDVTPALREYTETKLERAIHHFDDLVKEADVHLSV------ARNPRVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG 539
            EVT++     V+RA+E +E  Y SIDLV+S + R+LR+ KE+ +DHG
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRFKERHSDHG 101

[32][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
           RepID=A0YIH4_9CYAN
          Length = 212

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 44/115 (38%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TR 392
           +KL++QG+N+E+++A+ ++V  K+ + +  +  L  EVDV LS        R PR    +
Sbjct: 1   MKLVVQGKNLEITEAIHEYVHQKITKAVSHYQQLTNEVDVHLS------IARNPRINPKQ 54

Query: 393 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP 557
             EVT+Y     V+RA+E +E  Y SIDLV+  I R+LRK K+K    G+H+  P
Sbjct: 55  TAEVTIYA-NGTVIRAQESSENLYASIDLVADKIARQLRKFKDKR--QGKHLHPP 106

[33][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
           RepID=Q8YSA5_ANASP
          Length = 213

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 395
           +KL+I G+N+E++DA++++V  K+ + +     +  EVDV LS        R PR  TR+
Sbjct: 1   MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQ 54

Query: 396 -CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
             EVT+Y     V+RAEE +E  Y SIDLV+  I R+LRK KE++ D
Sbjct: 55  AAEVTIYA-NGSVIRAEESSENLYASIDLVADKISRQLRKYKERKQD 100

[34][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
           Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
          Length = 213

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 395
           +KL+I G+N+E++DA++++V  K+ + +     +  EVDV LS        R PR  TR+
Sbjct: 1   MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQ 54

Query: 396 -CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
             EVT+Y     V+RAEE +E  Y SIDLV+  I R+LRK KE++ D
Sbjct: 55  AAEVTIYA-NGSVIRAEESSENLYASIDLVADKISRQLRKYKERKQD 100

[35][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
           JA-3-3Ab RepID=Q2JS19_SYNJA
          Length = 191

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
 Frame = +3

Query: 225 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRR 395
           KL+IQG+N+E++DA++ +V++K+ R ++  + +  EVDV LS        R PR    + 
Sbjct: 3   KLVIQGKNVEITDAIRSYVQEKIERAVKHFAQITSEVDVNLSV------ARNPRISANQS 56

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT+Y     V+RAEE +E  Y SID V+  + RKLRK KE+   H
Sbjct: 57  AEVTVYA-NGTVIRAEESSENLYASIDRVADKLARKLRKYKERNGVH 102

[36][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
           JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
          Length = 190

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
 Frame = +3

Query: 225 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRR 395
           KL+IQG+N+E++DA++ +V++K+ R +   + +  EVDV LS        R PR   ++ 
Sbjct: 3   KLVIQGKNVEITDAIRSYVQEKIERAVSHFAQITSEVDVNLSV------ARNPRISASQS 56

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT+Y     V+RAEE +E  Y SID V+  + RKLRK KE+   H
Sbjct: 57  AEVTVYA-NGTVIRAEESSENLYASIDRVADKLARKLRKYKERNGIH 102

[37][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
          Length = 212

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TR 392
           +KL+IQG+N+E++DA+ ++V+ K+ + +     L  EVDV LS        R PR    +
Sbjct: 1   MKLVIQGKNLEITDAIHEYVQQKIAKAVSHFQQLTNEVDVHLSV------ARNPRINPRQ 54

Query: 393 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
             EVT+Y     V+RA+E +E  Y SIDLV+  I R+LRK KEK
Sbjct: 55  TAEVTIYA-NGTVIRAQESSENLYASIDLVADKIARQLRKYKEK 97

[38][TOP]
>UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp.
           RS9917 RepID=A3ZA02_9SYNE
          Length = 195

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 45/113 (39%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +KL+I GRN+EL+ A++ + + K+ R +Q    +V+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLELTPALRDYTQSKLERAVQHFDDMVKEADVHLSV------ARNPRVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 554
            EVT++     V+RA+E +E  Y SIDLV+S + R+LR+ KE+ +DH  H  G
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRFKERHSDH-HHSNG 105

[39][TOP]
>UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
           RepID=Q05SE1_9SYNE
          Length = 195

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/107 (39%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +KL+I GRN+E++ A++++ E K+ R +Q +  +V E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLEVTAALREYTESKLERAVQHYDEMVVEADVHLSV------ARNPRVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT++     V+RA+E +E  Y SIDLV++ + R+LR+ KE+ +DH
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVANKLSRQLRRYKERHSDH 100

[40][TOP]
>UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806
           RepID=A8YEZ8_MICAE
          Length = 199

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 43/108 (39%), Positives = 65/108 (60%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +KL+IQG N+ +++A+  +VE K+ + ++  + +  +VDV LS        R P   + E
Sbjct: 1   MKLLIQGNNIAVTEAIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHKAE 57

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 545
           VT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KE+  DH  H
Sbjct: 58  VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTH 104

[41][TOP]
>UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
           str. MIT 9313 RepID=Q7V8W0_PROMM
          Length = 195

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 43/107 (40%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +KL+I GRN+EL+ A++++ + K+ R IQ    +V+E DV LS        R P    + 
Sbjct: 1   MKLLIHGRNLELTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT++     V+RA+E +E  Y SIDLV+S + R+LR+ KE+ +DH
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH 100

[42][TOP]
>UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9303 RepID=A2CBL6_PROM3
          Length = 195

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 43/107 (40%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +KL+I GRN+EL+ A++++ + K+ R IQ    +V+E DV LS        R P    + 
Sbjct: 1   MKLLIHGRNLELTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT++     V+RA+E +E  Y SIDLV+S + R+LR+ KE+ +DH
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH 100

[43][TOP]
>UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803
           RepID=A5GJ89_SYNPW
          Length = 195

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +KL+I GRN++++ A++ + E K+ R I     LV+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLDVTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT++     V+RA+E +E  Y SIDLV+S + R+LR+ K++ +DH
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRFKDRHSDH 100

[44][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
          Length = 224

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 42/104 (40%), Positives = 66/104 (63%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +KL+IQG+N+E++DA++ HV  K+ +       L+ +VDV LS +        P+ +  E
Sbjct: 1   MKLVIQGKNIEITDAIRSHVHQKIEKATAHFQTLINKVDVCLSVQNNPRI--APK-QTAE 57

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
           VT++   + VVRAEE +E+ Y SID+V+  + R+LRK KEK  D
Sbjct: 58  VTVFL-NNVVVRAEESSESLYASIDMVTDKLTRQLRKYKEKRRD 100

[45][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
          Length = 213

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TR 392
           +KL+I G+N+E++DA++++V  K+ + +     +  EVDV LS        R PR    +
Sbjct: 1   MKLVIHGKNIEITDAIREYVHQKIEKAVSHFQNITNEVDVHLSV------ARNPRITTKQ 54

Query: 393 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 572
             EVT++     V+RAEE +E  Y SIDLV+  I R+LRK KE+  D   +    N++  
Sbjct: 55  AAEVTIFA-NGSVIRAEESSENLYASIDLVADKIARQLRKYKERLQDQKTNAPPTNQVLV 113

Query: 573 SE 578
            E
Sbjct: 114 PE 115

[46][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
          Length = 215

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TR 392
           +KL+IQG+N+E++D++ ++V  K+ + +     L  EVDV LS        R PR    +
Sbjct: 1   MKLVIQGKNIEITDSIHEYVNQKIEKAVNHFQQLTTEVDVHLSV------ARNPRINPKQ 54

Query: 393 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
             EVT+Y     V+RA+E +E  Y SIDLV+  I R+LRK KEK
Sbjct: 55  TAEVTIYA-NGTVIRAQESSENLYASIDLVADKIARQLRKYKEK 97

[47][TOP]
>UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
           RepID=A4CWK2_SYNPV
          Length = 195

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +KL+I GRN++++ A++ + E K+ R I     LV+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLDVTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT++     V+RA+E +E  Y SIDLV+S + R+LR+ K++ +DH
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVASKLARQLRRYKDRHSDH 100

[48][TOP]
>UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2
           Tax=Cyanothece RepID=C7QW97_CYAP0
          Length = 205

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 45/125 (36%), Positives = 73/125 (58%)
 Frame = +3

Query: 204 DGPLSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGP 383
           D  + S+KL+IQG N+++++++  +V++K+ + ++    +  +VDV LS        R  
Sbjct: 2   DNGVLSMKLLIQGNNIDVTESIHDYVQEKLEKAVKHFQSITTKVDVHLSVARNA---RIT 58

Query: 384 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 563
              + EVT+Y     V+RA+E +E+ Y SIDLVS  I R+LRK KEK      + K PN 
Sbjct: 59  NKHKAEVTVYANGT-VIRAQEGSESLYASIDLVSDKIARQLRKYKEKL----NNKKAPNP 113

Query: 564 LKFSE 578
           +K  E
Sbjct: 114 VKVGE 118

[49][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
           punctiforme PCC 73102 RepID=B2IVM1_NOSP7
          Length = 214

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRR 395
           +KL+I  +N+E++DA++++V  K+ +       +  EVDV LS        R PR  TR+
Sbjct: 1   MKLVIHSKNIEITDAIREYVHQKIEKAASHFQSITNEVDVHLSV------ARNPRINTRQ 54

Query: 396 C-EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
             EVT+Y     V+RAEE +E  Y SIDLV+  I R+LRK KE+  D
Sbjct: 55  AAEVTIYANG-SVIRAEESSENLYASIDLVADKIARQLRKYKERRQD 100

[50][TOP]
>UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa
           NIES-843 RepID=B0JSS1_MICAN
          Length = 199

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 42/105 (40%), Positives = 63/105 (60%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +KL+IQG N+ +++ +  +VE K+ + ++  + +  +VDV LS        R P   R E
Sbjct: 1   MKLLIQGNNIAVTEPIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHRAE 57

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
           VT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KE+  DH
Sbjct: 58  VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERLVDH 101

[51][TOP]
>UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9301 RepID=A3PBB8_PROM0
          Length = 194

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +K++I G+N+EL+ A+K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRL 566
            EVT++     V+RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H +  K  + L
Sbjct: 55  AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL 112

[52][TOP]
>UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str.
           AS9601 RepID=A2BPM8_PROMS
          Length = 194

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +K++I G+N+EL+ A+K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRL 566
            EVT++     V+RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H +  K  + L
Sbjct: 55  AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL 112

[53][TOP]
>UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured
           Prochlorococcus marinus clone ASNC2259
           RepID=Q1PKX8_PROMA
          Length = 194

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +K++I G+N+EL+ A+K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRL 566
            EVT++     V+RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H +  K  + L
Sbjct: 55  AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL 112

[54][TOP]
>UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001
           RepID=B5IMZ9_9CHRO
          Length = 195

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 45/114 (39%), Positives = 70/114 (61%), Gaps = 2/114 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 395
           +KL+I GRN+E++ A++++ E K+ R I     +V+E DV LS        R PR  +  
Sbjct: 1   MKLLIHGRNLEVTPAIREYTETKLTRAITHFEGMVKEADVHLSV------ARNPRVPQQI 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP 557
            EVT++     V+RA+EH++  Y SIDLV+S + R+L + KE+   H RH +GP
Sbjct: 55  AEVTMFANGT-VIRAQEHSDNLYASIDLVASKLTRQLNRYKERV--HERH-QGP 104

[55][TOP]
>UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH
           5701 RepID=A3YVD7_9SYNE
          Length = 195

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 40/107 (37%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +KL+I GRN++++ A++ + E K+GR I  +  LV+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLDVTPAIRDYTEAKLGRAINHYEGLVKEADVHLSV------ARNPRVAQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT++     V+RA+E +E  Y SID+V+  + R+LR+ K++ ++H
Sbjct: 55  AEVTVFA-NGVVIRAQERSENLYASIDMVAGKLSRQLRRYKDRLSNH 100

[56][TOP]
>UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142
           RepID=B1WZE1_CYAA5
          Length = 201

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 41/106 (38%), Positives = 65/106 (61%)
 Frame = +3

Query: 219 SVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRC 398
           S+KL+IQG N+++++++  +V  K+ + ++ +  L  +VDV LS     +  R     + 
Sbjct: 2   SMKLLIQGNNIDVTESINDYVTQKLEKAVKHYQTLTTKVDVHLSV---AKNARITNKHKA 58

Query: 399 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
           EVT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KEK  +H
Sbjct: 59  EVTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNH 103

[57][TOP]
>UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307
           RepID=A5GUZ2_SYNR3
          Length = 187

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 40/110 (36%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +KL+I GRN+E++ A++ + E K+ R +   + +V+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLEVTPALRDYTETKLSRAVSHFNGMVQEADVHLSV------ARNPRVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 545
            EVTL+     V+RA+E ++  Y SIDLV+  + R+L++ K++   HG H
Sbjct: 55  AEVTLFASGT-VIRAQERSQNLYASIDLVAGKLARQLQRHKDRRQGHGHH 103

[58][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
           RepID=Q8DKM6_THEEB
          Length = 209

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 40/107 (37%), Positives = 63/107 (58%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           ++L+I G+N++++D ++ ++  K+ R       ++ EVDV LS          P+ +  E
Sbjct: 1   MRLVIHGKNIDITDGIRSYLNQKIERATSHFQNVINEVDVHLSVARNRS--TAPK-QTAE 57

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 542
           VT++     V+RAEE +E  Y SIDLV+  I RKLRK+KEK  D  R
Sbjct: 58  VTVFVNG-SVIRAEESSENLYASIDLVADKIARKLRKLKEKRQDKSR 103

[59][TOP]
>UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Prochlorococcus marinus str. NATL2A
           RepID=Q46H11_PROMT
          Length = 194

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +KL+I GRN+EL+ +++ + + K+ +       +V+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLELTQSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 545
            EVT++     V+RA+E +E  Y SIDLV++ + R+LRK KE+   H  H
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVH 103

[60][TOP]
>UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. NATL1A RepID=A2C0K6_PROM1
          Length = 194

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +KL+I GRN+EL+ +++ + + K+ +       +V+E DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLELTPSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 545
            EVT++     V+RA+E +E  Y SIDLV++ + R+LRK KE+   H  H
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVH 103

[61][TOP]
>UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus
           marinus clone HF10-88F10 RepID=Q1PJW9_PROMA
          Length = 194

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +K++I G+N+EL+ A+K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMK 551
            EVT++     V+RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H    K
Sbjct: 55  AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNNQFK 107

[62][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
          Length = 199

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 39/104 (37%), Positives = 64/104 (61%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +KL+IQG N+ +++A+  +V++K+ + ++    +  +VDV LS     + GR     + E
Sbjct: 1   MKLLIQGNNITVTEAIHDYVQEKLEKAVKHFQAITTKVDVHLSV---AKNGRVQNKHKAE 57

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
           VT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KE+  +
Sbjct: 58  VTVYANG-AVIRAQEGSENLYASIDLVSDKIARQLRKYKERRLE 100

[63][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
           6803 RepID=LRTA_SYNY3
          Length = 191

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 44/108 (40%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +KL+IQG N+ +++A+  +VE+KV R ++    L  +VDV LS        R     + E
Sbjct: 1   MKLLIQGNNITVTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSV---ARNARITNKHKAE 57

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HG 539
           VT+Y     V+RA+E +E  Y SIDLV+  I R+LRK KE+  D  HG
Sbjct: 58  VTVYA-NGTVIRAQEGSENLYASIDLVADKIARQLRKYKERIQDKQHG 104

[64][TOP]
>UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus
           RepID=Q7VDH9_PROMA
          Length = 195

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 39/107 (36%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +K++I GRN+EL+ A++++ + K+ + I     +V+E DV LS        + PR   + 
Sbjct: 1   MKVLIHGRNLELTPALREYTKSKLEKAIHHFGDMVKEADVHLSV------AKNPRVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT++     V+RA+E ++  Y SIDLVS+ + R+LR+ KE+ +DH
Sbjct: 55  AEVTVFANGT-VIRAQERSQNLYASIDLVSNKLCRQLRRYKERHSDH 100

[65][TOP]
>UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102
           RepID=Q7U8F3_SYNPX
          Length = 195

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +KL+I GRN+E++ A++ + + K+ R        VRE DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLEITPALRDYTQTKLERATHHFGNAVREADVHLSV------ARNPRVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT++     V+RA+E +E  Y SIDL +S + R+LR+ KE+ +DH
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLAASKLARQLRRWKERHSDH 100

[66][TOP]
>UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7
          Length = 199

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 40/108 (37%), Positives = 64/108 (59%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +KL+IQG N+ +++A+  +V+ K+ + ++    L  +VDV LS     +  R     + E
Sbjct: 1   MKLLIQGNNITVTEAIHDYVQQKLEKAVKHFQTLTTKVDVHLSV---AKNARIQNKHKAE 57

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH 545
           VT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KE++ +   H
Sbjct: 58  VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKERKLEQNAH 104

[67][TOP]
>UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT
          Length = 199

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 39/105 (37%), Positives = 65/105 (61%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +KL+IQG N+++++++  +V+ K+ + ++ +     +VDV LS     +  R     + E
Sbjct: 1   MKLLIQGNNIDVTESINDYVKQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAE 57

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
           VT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KEK ++H
Sbjct: 58  VTVYANGT-VIRAQEGSENLYASIDLVSDKISRQLRKYKEKVSNH 101

[68][TOP]
>UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str.
           MIT 9215 RepID=A8G3B2_PROM2
          Length = 194

 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +K++I G+N+EL+ A+K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
            EVT++     V+RAEE  E  Y SIDLVS+ + RKLRK KE+
Sbjct: 55  AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKER 96

[69][TOP]
>UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT
           9202 RepID=B9P0E9_PROMA
          Length = 194

 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +K++I G+N+EL+ A+K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
            EVT++     V+RAEE  E  Y SIDLVS+ + RKLRK KE+
Sbjct: 55  AEVTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKER 96

[70][TOP]
>UniRef100_Q00W70 Chloroplast-specific ribosomal protein (ISS) n=1 Tax=Ostreococcus
           tauri RepID=Q00W70_OSTTA
          Length = 184

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
 Frame = +3

Query: 216 SSVKLIIQGRNMELSDAVKQHVEDKVGRVIQK-HSYLVREVDVRLSTRGGGEFGRGPRTR 392
           + VK+++QG ++E++ A+ ++V  K+GR      S  +REVDVR S RGG E  +G    
Sbjct: 48  TDVKMLVQGLHLEITPAIDEYVRSKIGRACSHVDSRDIREVDVRCSARGG-EGSKGGVEH 106

Query: 393 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RH 545
           + EVT+   R   + A+   E  Y +ID  + I+ R +RK KEK    G RH
Sbjct: 107 KTEVTVLMTRGPTLHADGVGENLYATIDQCADIVTRSIRKHKEKHGGKGARH 158

[71][TOP]
>UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9515 RepID=A2BV60_PROM5
          Length = 194

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +K++I G+N+EL+ A+K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNIELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRLSYQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN 560
            EVT++     ++RAEE  E  Y SIDLVS+ + RKLRK KE      RH K  N
Sbjct: 55  AEVTIFASGT-IIRAEEKTENLYSSIDLVSNKLCRKLRKYKE------RHYKNLN 102

[72][TOP]
>UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC
          Length = 195

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +KL+I GRN+E++ A++ + + K+ R        VRE DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLEITPALRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT++     V+RA+E +E  Y SIDL +  + R+LR+ KE+ +DH
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDH 100

[73][TOP]
>UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110
           RepID=A3IRI7_9CHRO
          Length = 199

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 39/105 (37%), Positives = 63/105 (60%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +KL+IQG N+++++++  +V  K+ + ++ +     +VDV LS     +  R     + E
Sbjct: 1   MKLLIQGNNIDVTESINDYVTQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAE 57

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
           VT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KEK  +H
Sbjct: 58  VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNH 101

[74][TOP]
>UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
           subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP
          Length = 194

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +K++I G+N+EL+  +K++ E K+ +    +  +V+E D+ LS        + PR   + 
Sbjct: 1   MKILIHGKNLELTGPLKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPN 560
            EVT++     ++RAEE  E  Y SIDLVS+ + RKLRK KE+     H   +K  N
Sbjct: 55  AEVTIFANGT-IIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHNKKLHNNLVKNKN 110

[75][TOP]
>UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
           Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9
          Length = 195

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +K++I GRN+E++ A++++   K+ R        +RE DV LS        R PR   + 
Sbjct: 1   MKVLIHGRNLEITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT++     V+RA+E +E  Y SIDLV   + R+LRK KE+  DH
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH 100

[76][TOP]
>UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE
          Length = 195

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +K++I GRN+E++ A++++   K+ R        +RE DV LS        R PR   + 
Sbjct: 1   MKVLIHGRNLEITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT++     V+RA+E +E  Y SIDLV   + R+LRK KE+  DH
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH 100

[77][TOP]
>UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9211 RepID=A9BE19_PROM4
          Length = 197

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 395
           +KL+I GRN+EL+ +++++ + K+ + I     +V+E DV LS        + P   +  
Sbjct: 1   MKLLIHGRNLELTPSLREYTQSKLEKAIHHFDGIVQEADVHLS------IAKNPSVPQQI 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT++     V+RA+E ++  Y SIDLV++ + R+LRK KE+ +DH
Sbjct: 55  AEVTVFANGT-VIRAQERSQNLYASIDLVATKLCRQLRKYKERHSDH 100

[78][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
          Length = 207

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 38/104 (36%), Positives = 61/104 (58%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +KL++QG N++++ A+  +V+ K+ + +  +   + E+DV LS     +  +    +  E
Sbjct: 1   MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAE 57

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
           VT+Y     V+RAEE  E  Y SIDLVS  I R+L+K KEK  D
Sbjct: 58  VTIYANGT-VIRAEECNENLYASIDLVSDKITRQLKKYKEKLRD 100

[79][TOP]
>UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
           Tax=Prochlorococcus marinus str. MIT 9312
           RepID=Q31CD8_PROM9
          Length = 194

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 38/101 (37%), Positives = 61/101 (60%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K++I G+N+EL+ A+K++ + K+ +    +  +V+E D+ LS     E       +  E
Sbjct: 1   MKILIHGKNLELTGALKEYTQAKIEKATHHYKDIVKEADIHLSI----EKNPSVSLQTAE 56

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT++     V+RAEE  E  Y SIDLVS+ + RKLRK KE+
Sbjct: 57  VTIFANGT-VIRAEEKTENLYSSIDLVSNKLCRKLRKYKER 96

[80][TOP]
>UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109
           RepID=D0CH01_9SYNE
          Length = 195

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RR 395
           +KL+I GRN+E++ +++ + + K+ R        VRE DV LS        R PR   + 
Sbjct: 1   MKLLIHGRNLEITPSLRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQT 54

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH 536
            EVT++     V+RA+E +E  Y SIDL +  + R+LR+ KE+ +DH
Sbjct: 55  AEVTVFANGT-VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDH 100

[81][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
           PCC 6301 RepID=Q5N179_SYNP6
          Length = 207

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 37/104 (35%), Positives = 61/104 (58%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +KL++QG N++++ A+  +V+ K+ + +  +   + E+DV LS     +  +    +  E
Sbjct: 1   MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAE 57

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
           VT+Y     V+RAEE  E  Y SIDLVS  I R+L+K KE+  D
Sbjct: 58  VTIYANGT-VIRAEECNENLYASIDLVSDKITRQLKKYKEELRD 100

[82][TOP]
>UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002
           RepID=LRTA_SYNP2
          Length = 193

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 40/110 (36%), Positives = 61/110 (55%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +KL+IQG N+ +++++  +VE K+ +  +       +VDV LS        R     + E
Sbjct: 1   MKLLIQGNNIAVTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNA---RITDKHKAE 57

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK 551
           VT+Y     V+RA+E +E  Y SIDLVS  I R+LRK KEK      H++
Sbjct: 58  VTVYANGT-VIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQ 106

[83][TOP]
>UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
           RepID=B0P2P9_9CLOT
          Length = 179

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 39/106 (36%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
 Frame = +3

Query: 213 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVRE--VDVRLSTRGGGEFGRGPR 386
           + ++K II G+N+E+++ +K  +E+K+GR+     YLV +  V+V LS + G +      
Sbjct: 1   MGAMKFIISGKNIEVTEGIKAAIEEKLGRL---DKYLVDDTIVNVTLSVQKGRQ------ 51

Query: 387 TRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
             + EVT+  K H ++RAEE +E  Y SIDLV  +I+R++R+ K +
Sbjct: 52  --KIEVTIPMKGH-IIRAEEGSEDMYVSIDLVVDVIERQIRRYKTR 94

[84][TOP]
>UniRef100_A4SAX9 Plastid-specific ribosomal protein 1 n=1 Tax=Ostreococcus
           lucimarinus CCE9901 RepID=A4SAX9_OSTLU
          Length = 132

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
 Frame = +3

Query: 228 LIIQGRNMELSDAVKQHVEDKVGRVIQK-HSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 404
           +++QG ++E++ A+ ++   K+G+         +REVDVR S RGG E  RG    + EV
Sbjct: 1   MLVQGLHLEITPAIDEYCRAKIGKACSHVDPREIREVDVRCSARGG-EDSRGGHEHKTEV 59

Query: 405 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RH 545
           T+   R   + A+   E  Y +ID  + I+ R +RK KEK +  G RH
Sbjct: 60  TVLMTRGTTLHADGTGENLYATIDSCADIVTRAIRKHKEKHSGKGSRH 107

[85][TOP]
>UniRef100_C0PND1 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=C0PND1_MAIZE
          Length = 325

 Score = 63.9 bits (154), Expect = 8e-09
 Identities = 43/131 (32%), Positives = 68/131 (51%)
 Frame = -2

Query: 554 SLHVATMISLFFLDLSQLSLNDRGHQIYTPIGSFCMLLSPHHPMSLCIQSHLTSTRSRST 375
           S+  A  + L  LDL++L+L+D G ++   +G   +LL     M+L  +  L + R  + 
Sbjct: 136 SVSAAAHLRLLLLDLAELALDDGGGEVDAGVGGLGVLLGAQDAMALGEEGDLAARRLGAP 195

Query: 374 AKLSSSASR*PDINFPD*VAMLLNYSSHFILHVLLHSITQLHISTLDD*FDGREWTIP*H 195
           A+L+++      +  PD VA+L +  +H +L VLL  + QL I  L D    RE T+P H
Sbjct: 196 AELAAARGE-AHVYLPDQVAVLGHRPTHLVLDVLLELLAQLRIPALHDEAHRRERTVPGH 254

Query: 194 GD*SGTAAFGG 162
               G AA  G
Sbjct: 255 PHRHGDAAAPG 265

[86][TOP]
>UniRef100_C8WMZ8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Eggerthella lenta DSM 2243 RepID=C8WMZ8_9ACTN
          Length = 191

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRGPRTRR 395
           + + + GR M ++DA++++ E+K+G  ++      LV E+ + +           PR   
Sbjct: 1   MSITVTGRKMPVTDALREYAEEKIGNSMKVMDIDPLVAEIVLFVEKNPAN-----PRPAV 55

Query: 396 CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
           CEVTL TK H ++R EEH E  Y +ID+ ++ + R+LRK K K  D
Sbjct: 56  CEVTLRTKGH-IIRVEEHEEDMYAAIDVAAAKVVRQLRKYKTKVVD 100

[87][TOP]
>UniRef100_Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Deinococcus geothermalis DSM 11300
           RepID=Q1IYK5_DEIGD
          Length = 186

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 37/108 (34%), Positives = 62/108 (57%)
 Frame = +3

Query: 234 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 413
           + GRN++++DA++ +VE+K+ R + + S  + +  V L+ R   + GR     R EV L 
Sbjct: 6   LSGRNVDVTDAMRDYVEEKLTR-LDRFSDQITDARVVLTVRDVRDAGR---RNRVEVQLN 61

Query: 414 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP 557
              +G++RAEEH    Y +ID  S +++R+LRK K K   H +    P
Sbjct: 62  VP-NGIIRAEEHHADMYAAIDRASDVLERQLRKFKTKYLRHRQEAAPP 108

[88][TOP]
>UniRef100_B1SBZ3 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius
           subsp. infantarius ATCC BAA-102 RepID=B1SBZ3_9STRE
          Length = 182

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 36/101 (35%), Positives = 65/101 (64%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K  ++G N+E++DA++ +VE K+G+ I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKYSVRGENIEVTDAIRNYVESKLGK-IEKYFNAEQELDARVNLKVYRE-----KTAKVE 55

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+       +RAE+ ++  YGSIDLV+  I+R++RK K K
Sbjct: 56  VTILVNSI-TLRAEDVSQDMYGSIDLVTDKIERQIRKNKTK 95

[89][TOP]
>UniRef100_C1CWW9 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Deinococcus deserti VCD115 RepID=C1CWW9_DEIDV
          Length = 188

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 34/97 (35%), Positives = 60/97 (61%)
 Frame = +3

Query: 234 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 413
           + GRN+E+SDA++ +V++K+ R + +++  + +  V L+ R   + GR     R EV L 
Sbjct: 6   LSGRNVEVSDAMRDYVQEKLTR-LDRYNDQITDARVTLTVRDVRDAGR---RNRVEVQLN 61

Query: 414 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
              +G++RAEEH    Y +ID  S +++R+LRK K +
Sbjct: 62  VP-NGIIRAEEHHSDMYAAIDKASDVLERQLRKFKTR 97

[90][TOP]
>UniRef100_C2D8Z3 Possible ribosome-associated inhibitor A n=1 Tax=Atopobium vaginae
           DSM 15829 RepID=C2D8Z3_9ACTN
          Length = 192

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 37/108 (34%), Positives = 54/108 (50%)
 Frame = +3

Query: 234 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 413
           I GR + +SDA++ HV+ KVG  ++         DV L           P  + CEVT+Y
Sbjct: 6   ISGRKVSVSDALRDHVQHKVGDALKVFDITPMSCDVVLRVDKNHS---NPDRKTCEVTVY 62

Query: 414 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP 557
             R+ VVR E  +E  Y +ID  S  + R+LRK K +  D  +  + P
Sbjct: 63  V-RNNVVRVEASSEDMYAAIDAASDKVTRQLRKYKTRIIDRKQRSQAP 109

[91][TOP]
>UniRef100_C4V4X1 Ribosome-associated inhibitor A n=1 Tax=Selenomonas flueggei ATCC
           43531 RepID=C4V4X1_9FIRM
          Length = 181

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 37/97 (38%), Positives = 58/97 (59%)
 Frame = +3

Query: 234 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 413
           I+G+N+E++ A++ +VE +VG+ I K+   V E+ V LS  G        +  + EVT  
Sbjct: 6   IRGKNVEVTPALRDYVEKRVGK-ITKYFDNVGEIAVLLSVEG--------KHHKVEVTAP 56

Query: 414 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
             R  ++R EEH+E  Y SIDLV   ++R++RK K K
Sbjct: 57  VARGILLRGEEHSEDMYSSIDLVIEKLERQIRKQKTK 93

[92][TOP]
>UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
           35704 RepID=B0NJJ3_EUBSP
          Length = 179

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 38/116 (32%), Positives = 67/116 (57%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K II G+N++++  +K+ VE+K+G+ ++++     E+ V LS +           ++ E
Sbjct: 1   MKFIIIGKNIDVTPGLKEAVENKLGK-LERYFTPDTEIHVTLSVQR--------ERQKIE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK 569
           VT+  K  G++R+E+ +   Y SIDLV  +I+R+LRK K K     RH +G    K
Sbjct: 52  VTIPVKG-GIIRSEQESSDMYVSIDLVEEVIERQLRKYKNKLI--ARHQEGSGNFK 104

[93][TOP]
>UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI
          Length = 187

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR-- 395
           ++  I G+N+E+++ ++ +V  K+ +V      L   VDV LS        R PR  R  
Sbjct: 1   MQFAIHGKNIEVTEPIRDYVSSKLDKVFAHFDQLTMGVDVYLSV------ARNPRISRSH 54

Query: 396 -CEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
             EVT+      ++RAEE  E  Y SIDLV+  + R++RK KE+
Sbjct: 55  SAEVTVQASGT-IIRAEEETENLYASIDLVADKLHRQMRKYKER 97

[94][TOP]
>UniRef100_B4U4G1 Ribosomal subunit interface protein n=1 Tax=Streptococcus equi
           subsp. zooepidemicus MGCS10565 RepID=B4U4G1_STREM
          Length = 182

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 38/119 (31%), Positives = 70/119 (58%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K  I+G N+E+++A++ +VE K+ + I+K+  + +E+D R++ +   E     +T + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVVEQEIDARVNLKVYRE-----KTAKVE 55

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 578
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R     +++  SE
Sbjct: 56  VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHREKMSTSQVFTSE 113

[95][TOP]
>UniRef100_C9L411 Ribosomal subunit interface protein n=1 Tax=Blautia hansenii DSM
           20583 RepID=C9L411_RUMHA
          Length = 176

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 37/104 (35%), Positives = 61/104 (58%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K II G+N+E++  ++  VEDK+G+ ++K+     E+ V LS             ++ E
Sbjct: 1   MKFIISGKNIEVTQGLRSAVEDKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
           VT+  K + ++R+E+ +   Y SIDLV  II+R+LRK K K  D
Sbjct: 52  VTIPVKGN-IIRSEQVSSDMYVSIDLVEEIIERQLRKYKNKIID 94

[96][TOP]
>UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
           27758 RepID=C0BAM2_9FIRM
          Length = 189

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 36/104 (34%), Positives = 60/104 (57%)
 Frame = +3

Query: 213 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 392
           LS +  II GRN++++  ++Q VE K+G++     Y   E D+ ++     E       +
Sbjct: 9   LSCMNFIISGRNIDITPGLRQAVEQKLGKL---EKYFTPETDIIVTLSVEKE------RQ 59

Query: 393 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           + EVT+  K + ++R+E+ +   Y SIDLV  II+R+LRK K K
Sbjct: 60  KIEVTIPVKGN-IIRSEQESSDMYVSIDLVEEIIERQLRKYKTK 102

[97][TOP]
>UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
           27756 RepID=A5KKP2_9FIRM
          Length = 198

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 35/104 (33%), Positives = 62/104 (59%)
 Frame = +3

Query: 213 LSSVKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTR 392
           L+S+  II G+N+E++  +K+ +E K+G+ ++++     E+ V LS   G +        
Sbjct: 11  LNSMNFIISGKNIEVTPGLKEAIEQKLGK-LERYFTPETEIIVTLSVEKGRQ-------- 61

Query: 393 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           + EVT+  K   ++R+E+ +   Y SIDLV  +I+R+LRK K K
Sbjct: 62  KIEVTIPVKG-SIIRSEQTSSDMYVSIDLVEEVIERQLRKYKNK 104

[98][TOP]
>UniRef100_C6SS06 Putative ribosome-associated protein n=2 Tax=Streptococcus mutans
           RepID=C6SS06_STRMN
          Length = 182

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 38/110 (34%), Positives = 65/110 (59%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K  I+G N+E++DA++ +VE K+ + I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKYSIRGENIEVTDAIRNYVESKLKK-IEKYFNAEQELDARINLKVYRE-----KTAKVE 55

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK 551
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R  K
Sbjct: 56  VTI-PLAPVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHREKK 104

[99][TOP]
>UniRef100_Q9RVE7 Protein DR_1082 n=1 Tax=Deinococcus radiodurans RepID=UA82_DEIRA
          Length = 191

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 34/106 (32%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
 Frame = +3

Query: 234 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 413
           + GRN+E+++ ++++VE+K+ R + +++  + +  V L+ R   +     R  R EV L 
Sbjct: 6   LSGRNVEVTEPMREYVEEKLSR-LDRYTDQITDARVTLTVR---DVRNNERRNRVEVQLN 61

Query: 414 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE---KETDHGR 542
               G++RAEEH    Y +ID  S +++R+LRK K    K+   GR
Sbjct: 62  VPG-GIIRAEEHHADMYAAIDKASDVLERQLRKFKTRYMKQRQEGR 106

[100][TOP]
>UniRef100_Q3CZ63 Ribosomal subunit interface protein n=6 Tax=Streptococcus
           agalactiae RepID=Q3CZ63_STRAG
          Length = 184

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 35/101 (34%), Positives = 64/101 (63%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K  I+G N+E+++A++++VE K+ +V +K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKYSIRGENIEVTEAIREYVETKLSKV-EKYFNEAQELDTRVNLKVYRE-----KTAKVE 55

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K
Sbjct: 56  VTILIDSI-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTK 95

[101][TOP]
>UniRef100_C7N909 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Leptotrichia buccalis DSM 1135 RepID=C7N909_LEPBD
          Length = 106

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 32/107 (29%), Positives = 60/107 (56%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K+II G+ ++++DA+K + E+K+ R I K+S  + E+DV L+       G   +     
Sbjct: 1   MKIIISGKQLKITDAIKNYTEEKISR-ISKYSDAITEIDVVLTVEDTKSEGPVHKADGLV 59

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 542
               TK    ++ E   +  Y +ID +S  ++R++RK KE++ DH +
Sbjct: 60  FASGTK----IKIEAENKDLYAAIDDLSDRLERQVRKYKERQKDHNK 102

[102][TOP]
>UniRef100_C0BYR7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
           15053 RepID=C0BYR7_9CLOT
          Length = 178

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K II G+N++++  +++ VE K+G+ ++K+     E+ V LS             ++ E
Sbjct: 1   MKFIISGKNIDVTPGLRETVEHKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN-RLKFSE 578
           VT+  K + ++R+E+ +   Y SIDLV  +I+R+LRK K K     RH +G N R +F E
Sbjct: 52  VTIPVKGN-IIRSEQVSSDMYVSIDLVEEVIERQLRKYKNKLV--ARHQEGGNFRQEFFE 108

[103][TOP]
>UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
           29176 RepID=B5CNW3_9FIRM
          Length = 186

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 33/101 (32%), Positives = 61/101 (60%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +  II G+N+E++  +K  +E K+G+ ++++     E++V LS   G +        + E
Sbjct: 1   MNFIISGKNIEVTPGLKDAIEQKLGK-LERYFTPETEINVTLSVEKGRQ--------KIE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+  K + ++R+E+ ++  Y SIDLV  +I+R+LRK K K
Sbjct: 52  VTIPVKGN-IIRSEQTSDNMYVSIDLVEEVIERQLRKYKNK 91

[104][TOP]
>UniRef100_C0M6F8 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Streptococcus equi subsp. equi 4047
           RepID=C0M6F8_STRE4
          Length = 182

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 38/119 (31%), Positives = 69/119 (57%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K  I+G N+E+++A++ +VE K+ + I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVE 55

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 578
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R     +++  SE
Sbjct: 56  VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHREKMSTSQVFTSE 113

[105][TOP]
>UniRef100_B9DV32 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Streptococcus uberis 0140J RepID=B9DV32_STRU0
          Length = 182

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 35/101 (34%), Positives = 63/101 (62%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K  I+G N+E+++A++ +VE K+ + I+K+     E+D R++ +   E     +T + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVEAKLAK-IEKYFVEDSEIDTRVNLKVYRE-----KTAKVE 55

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+      ++RAE+ ++  YGSIDLV   I+R++RK K K
Sbjct: 56  VTIILGSM-ILRAEDVSQDMYGSIDLVVDKIERQIRKNKTK 95

[106][TOP]
>UniRef100_C4BVH6 Sigma 54 modulation protein; SSU ribosomal protein S30P n=1
           Tax=Sebaldella termitidis ATCC 33386 RepID=C4BVH6_9FUSO
          Length = 106

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           + +II GR +E+++ +K++ E+K+GRV  K+   + E+DV LS       G      R +
Sbjct: 1   MNIIISGRRLEVTEPIKKYAEEKIGRV-NKYFDHITEIDVTLSVEKSKVEG---EIHRAD 56

Query: 402 VTLYTKRHGV-VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 542
           V L+   +G+ ++ E   +  Y +ID  + +++RK+R+ KEK  DH +
Sbjct: 57  VLLF--GNGLKLKVEMEDKDLYAAIDKATDVLERKVRQHKEKLKDHNK 102

[107][TOP]
>UniRef100_C0MH43 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Steptococcus equi subsp. zooepidemicus H70
           RepID=C0MH43_STRS7
          Length = 182

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 38/119 (31%), Positives = 69/119 (57%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K  I+G N+E+++A++ +VE K+ + I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVE 55

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 578
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K     R     +++  SE
Sbjct: 56  VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHREKVSTSQVFTSE 113

[108][TOP]
>UniRef100_Q3DA79 Ribosomal subunit interface protein n=2 Tax=Streptococcus
           agalactiae RepID=Q3DA79_STRAG
          Length = 184

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 35/101 (34%), Positives = 64/101 (63%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K  I+G N+E+++A++++VE K+ +V +K+    +E+D R++ +   E     +T + E
Sbjct: 2   IKYSIRGENIEVTEAIREYVETKLSKV-EKYFNEEQELDTRVNLKVYRE-----KTAKVE 55

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K
Sbjct: 56  VTILIDSI-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTK 95

[109][TOP]
>UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
           13275 RepID=B6FVY1_9CLOT
          Length = 194

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 34/101 (33%), Positives = 58/101 (57%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +KL I G+ MEL+  +K ++E K+ ++     Y+  + DV+++     + GR     + E
Sbjct: 9   MKLTISGKQMELTQGIKDNIESKLSKL---DKYISPDTDVKVTV--SAKKGR----HKIE 59

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+  K   V+RAEE  E  Y +IDLV   ++ +L+K K+K
Sbjct: 60  VTIAPKNGHVIRAEESQENLYPAIDLVVDKLKIQLKKYKDK 100

[110][TOP]
>UniRef100_A5ZRI8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
           29174 RepID=A5ZRI8_9FIRM
          Length = 175

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 37/104 (35%), Positives = 60/104 (57%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K II G+N+ +S  +K  VEDK+G+ ++++     EV V LS             ++ E
Sbjct: 1   MKFIISGKNITVSQGLKTAVEDKLGK-LERYFTPDTEVVVTLSVE--------KERQKIE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
           VT+  K + ++R+E+ +   Y SIDLV  +I+R+LRK K K  D
Sbjct: 52  VTIPMKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVD 94

[111][TOP]
>UniRef100_A6WEN5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Kineococcus radiotolerans SRS30216
           RepID=A6WEN5_KINRD
          Length = 256

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 32/109 (29%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +++++ GR+ ++ +  ++HVEDK+ +V+Q  +   + +DV LS        +   + R E
Sbjct: 1   MEVVVTGRHTDVKERFRRHVEDKLEKVVQ-FAPRAQRIDVELSHENNRR--QASSSERVE 57

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE-KETDHGRH 545
           +T+  K   VVRAE  A+  Y ++DL ++ +  +LR+ ++ ++  HGRH
Sbjct: 58  ITVRDK-GPVVRAEACADDPYAALDLATTKLYERLRRSRDRRKVHHGRH 105

[112][TOP]
>UniRef100_C2KX79 Ribosome-associated inhibitor A n=1 Tax=Oribacterium sinus F0268
           RepID=C2KX79_9FIRM
          Length = 176

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 37/101 (36%), Positives = 56/101 (55%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K+ I GRN+ L+D +K  VE K+G+ + K        +V LST+           ++ E
Sbjct: 1   MKITITGRNLSLTDGLKNGVEKKLGK-LDKFFQAETPCNVTLSTQKD--------MQKIE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+  K   V+RAEE     Y SIDLV  +++R++RK K K
Sbjct: 52  VTIPVKG-SVIRAEEATPDMYQSIDLVVDVLERQIRKYKNK 91

[113][TOP]
>UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
           ATCC 43243 RepID=B7AN97_9BACE
          Length = 179

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 35/104 (33%), Positives = 60/104 (57%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           ++ +I GRN+E++D +K+ VE+K+G+ + +      EV V LS             ++ E
Sbjct: 4   MRFVIVGRNIEVTDGLKEAVEEKLGK-LDRFFAPDTEVKVTLSVE--------KERQKIE 54

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
           VT+  K   ++R+E+ +   Y SIDLV  +I+R+L+K K K  D
Sbjct: 55  VTIPVK-GSIIRSEQVSNDMYVSIDLVEEVIERQLKKYKNKLID 97

[114][TOP]
>UniRef100_B0MGZ9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
           14662 RepID=B0MGZ9_9FIRM
          Length = 176

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 31/101 (30%), Positives = 61/101 (60%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +  II G+N+E+++ ++  +E+K+GR+     YL  ++D+ ++     E       ++ E
Sbjct: 1   MNFIISGKNIEVTEGIRAAIEEKLGRL---DKYLTDDIDIIVTLSVQKE------RQKIE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+  K H ++RAE+ +   Y SIDLV  I++R++R+ K +
Sbjct: 52  VTIPMKGH-IIRAEQDSADMYVSIDLVIDILERQIRRYKTR 91

[115][TOP]
>UniRef100_B0G387 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC
           27755 RepID=B0G387_9FIRM
          Length = 177

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 34/101 (33%), Positives = 61/101 (60%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K II G+N++++  +K  VE K+G+ +Q++     E+ V LS +           ++ E
Sbjct: 1   MKFIIIGKNIDVTPGLKDAVESKLGK-LQRYFTPDTEIHVTLSVQ--------KEHQKIE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+  K + ++R+E+ ++  Y SIDLV  +I+R+LRK K K
Sbjct: 52  VTIPVKGN-IIRSEQESDDMYVSIDLVEEVIERQLRKYKNK 91

[116][TOP]
>UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
           13814 RepID=A6BHR0_9FIRM
          Length = 178

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 35/101 (34%), Positives = 61/101 (60%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K II G+N++++  +++ VE K+G+ + ++     E+ V LS + G +        + E
Sbjct: 1   MKFIIIGKNIDVTPGLREAVESKLGK-LGRYFTPNTEIHVTLSVQKGHQ--------KIE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+  K  G+VR+E+ +   Y SIDLV  +I+R+LRK K K
Sbjct: 52  VTIPVKG-GLVRSEQESSDMYVSIDLVEEVIERQLRKYKNK 91

[117][TOP]
>UniRef100_A5Z528 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
           ATCC 27560 RepID=A5Z528_9FIRM
          Length = 179

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 36/110 (32%), Positives = 62/110 (56%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K+ I G+N+E+++ ++  VE+K+G+ + K+      VDV LS             ++ E
Sbjct: 1   MKIKIFGKNIEVTEGIRSAVEEKIGK-LDKYFAEETRVDVTLSVN--------KNEQKVE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK 551
           VT+  K   ++RAEE ++  Y SID+V   I+R+L K K K  D  + +K
Sbjct: 52  VTIPVKGR-IIRAEEISDDMYVSIDMVEETIERQLVKYKNKIIDKKKSIK 100

[118][TOP]
>UniRef100_UPI00004C2450 COG1544: Ribosome-associated protein Y (PSrp-1) n=1
           Tax=Streptococcus pyogenes M49 591 RepID=UPI00004C2450
          Length = 182

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 35/101 (34%), Positives = 63/101 (62%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K  I+G N+E+++A++ +VE K+ + I+K+    +E+D R++ +   E     R+ + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K
Sbjct: 56  VTIPLDSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTK 95

[119][TOP]
>UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens
           ATCC 27750 RepID=C4Z2Z4_EUBE2
          Length = 175

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 34/104 (32%), Positives = 61/104 (58%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           ++ II GRN+++++ +K  VE+K+G+ + +      EV+V LS             ++ E
Sbjct: 1   MRFIITGRNIDITEGLKSAVEEKLGK-LDRFFAPETEVNVTLSVE--------KERQKIE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
           VT+  K + ++R+E+ +   Y SIDLV  +I+R+L+K K K  D
Sbjct: 52  VTIPVKGN-IIRSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVD 94

[120][TOP]
>UniRef100_C9MUU2 Ribosomal subunit interface protein n=1 Tax=Leptotrichia hofstadii
           F0254 RepID=C9MUU2_9FUSO
          Length = 106

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 32/107 (29%), Positives = 60/107 (56%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K+II G+ ++++DA+K + E+KV + I K+S  + E+DV L+       G   +     
Sbjct: 1   MKIIISGKQLKITDAIKNYTEEKVSK-ISKYSDAITEIDVVLTVEDTKSEGPVHKADGLV 59

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 542
               TK    ++ E   +  Y +ID +S  ++R++RK KEK+ D+ +
Sbjct: 60  YASGTK----IKIEAENKDLYAAIDDLSDRLERQVRKYKEKQKDYNK 102

[121][TOP]
>UniRef100_C7ML59 Ribosomal subunit interface protein n=1 Tax=Cryptobacterium curtum
           DSM 15641 RepID=C7ML59_CRYCD
          Length = 188

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRG-PRTR 392
           +++ + GR M ++DA+K + E+K+G  ++      L+ EV + +      E  R   R  
Sbjct: 1   MEISVTGRKMPVTDALKSYAEEKIGNSMKVMDIDPLIAEVILHV------EQNRAIARPA 54

Query: 393 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
            CEVT+  K H ++R EEH E  Y +ID+ ++ + R+LRK K +
Sbjct: 55  ICEVTMTAKGH-IIRVEEHEEDMYAAIDVAAAKVLRQLRKFKTR 97

[122][TOP]
>UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
           49176 RepID=C4G2X0_ABIDE
          Length = 175

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 32/104 (30%), Positives = 60/104 (57%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K II GR   ++D ++  +E+K+G++     Y   + +V ++ +   +       ++ E
Sbjct: 1   MKYIINGRGTNVTDGLRNAIEEKLGKL---EHYFTPDTEVHVTLKVEKD------RQKVE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
           VT+  K H ++RAE+ ++  Y SIDL+  II+R+LR+ K K  D
Sbjct: 52  VTVPVKGH-IIRAEQVSDDMYVSIDLIEDIIERQLRRYKTKIVD 94

[123][TOP]
>UniRef100_A8U6N5 Ribosomal subunit interface protein n=1 Tax=Carnobacterium sp. AT7
           RepID=A8U6N5_9LACT
          Length = 180

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 35/100 (35%), Positives = 61/100 (61%)
 Frame = +3

Query: 225 KLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEV 404
           K  ++G N+E++ A++ +VE KVG+V +K+   V E    ++ +   +     +T + EV
Sbjct: 3   KYNVRGENIEVTAAIRSYVEKKVGKV-EKYFNDVPEATAHVNLKTYSD-----KTAKVEV 56

Query: 405 TLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           T+    + V+RAEE +   YGS+DLVS  ++R++RK K K
Sbjct: 57  TIPLP-YLVLRAEETSPDLYGSVDLVSDKLERQMRKYKTK 95

[124][TOP]
>UniRef100_Q5XAQ7 Ribosome-associated factor Y n=10 Tax=Streptococcus pyogenes
           RepID=RAFY_STRP6
          Length = 182

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 35/101 (34%), Positives = 63/101 (62%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K  I+G N+E+++A++ +VE K+ + I+K+    +E+D R++ +   E     R+ + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVE 55

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K
Sbjct: 56  VTIPLDSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTK 95

[125][TOP]
>UniRef100_C8W7H2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Atopobium parvulum DSM 20469 RepID=C8W7H2_ATOPD
          Length = 196

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 33/119 (27%), Positives = 57/119 (47%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           V + I GR + +S+A++ HV+ K+G  ++         DV L           P  +  E
Sbjct: 2   VDIKISGRKVSISEALRAHVDQKIGDALKVFDITPMSCDVVLRVDKNPS---NPDRKTTE 58

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 578
           VT++  R+ VVR    ++  Y +ID  +  + R+LRK K K  +   HMK    +  ++
Sbjct: 59  VTVFV-RNNVVRVTASSDDMYAAIDEAADKVSRQLRKYKTKVVERRHHMKSERGIALTQ 116

[126][TOP]
>UniRef100_C0VBX3 SSU ribosomal protein S30P n=1 Tax=Xylanimonas cellulosilytica DSM
           15894 RepID=C0VBX3_9MICO
          Length = 216

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 33/107 (30%), Positives = 62/107 (57%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +++++ GR+ ++ +  ++HVEDK+ +V Q  S LV+ VDV ++     +        R E
Sbjct: 1   MEIVVVGRHTDVPERFRRHVEDKLTKVTQL-SPLVQRVDVEVTHENNPKLS--DVRERVE 57

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 542
           +T+  K   V+RAE  A+  YG++DL    +  +LR+ +++  DH R
Sbjct: 58  LTVRAKGP-VIRAEAAADDRYGALDLAIDKLIERLRRSRDRRKDHRR 103

[127][TOP]
>UniRef100_B4VG26 Ribosomal subunit interface protein n=1 Tax=Streptomyces sp. Mg1
           RepID=B4VG26_9ACTO
          Length = 250

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
 Frame = +3

Query: 171 RRGTAS-ISMSWDGPLSSVKLIIQGRNMELSDAVKQHVEDKVG-RVIQKHSYLVREVDVR 344
           R+G AS +  S+ G    V ++++GR  E+ +  ++HV +K+    IQK    V  +DV 
Sbjct: 2   RKGDASPLGRSYPGTEFCVDIVVKGRKTEVPERFRKHVAEKLNPERIQKLDAKVISLDVE 61

Query: 345 LSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           +S        +  R+ R E+TL++ R  V+RAE  A   Y ++DL    ++ +LRK  +K
Sbjct: 62  VSKEHNPR--QADRSDRVEITLHS-RGPVIRAEAAAADAYAALDLAQDKLEARLRKQHDK 118

Query: 525 ETDHGRHMKGPNRLKFSE 578
                   +G  RL  +E
Sbjct: 119 RYTR----RGNGRLSAAE 132

[128][TOP]
>UniRef100_A3S9C1 Ribosomal subunit interface protein, putative n=2 Tax=Sulfitobacter
           RepID=A3S9C1_9RHOB
          Length = 188

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 31/111 (27%), Positives = 58/111 (52%)
 Frame = +3

Query: 234 IQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLY 413
           I G+ +++ +A++ HV+ ++G  +QK++    + +V  S + G EF        CE T++
Sbjct: 5   ISGKQIDIGEALQTHVKTELGEAVQKYAERPTDANVIFS-KSGHEFV-------CETTVH 56

Query: 414 TKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 566
                   A+ HA   YGS D  ++ ++++LR+ K +  DH R    P  L
Sbjct: 57  LSTGLTASAKAHATDIYGSFDSCAAKMEKQLRRYKRRLKDHHRERAQPVEL 107

[129][TOP]
>UniRef100_C5WIE9 Ribosome-associated factor Y n=1 Tax=Streptococcus dysgalactiae
           subsp. equisimilis GGS_124 RepID=C5WIE9_STRDG
          Length = 182

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 34/101 (33%), Positives = 63/101 (62%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K  I+G N+E+++A++ +VE K+ + I+K+    +E+D R++ +   E     ++ + E
Sbjct: 2   IKFSIRGENIEVTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KSSKVE 55

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+       +RAE+ ++  YGSIDLV   I+R++RK K K
Sbjct: 56  VTI-PLGSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTK 95

[130][TOP]
>UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale
           ATCC 33656 RepID=C4ZI34_EUBR3
          Length = 175

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 35/101 (34%), Positives = 60/101 (59%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +++ I G+N+EL++ +KQ VE+K+ + ++K      +V V LS     +        + E
Sbjct: 1   MRITISGKNIELTEGLKQAVEEKLSK-LEKFFKPDTDVYVTLSVEKDRQ--------KIE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+  K H V+R+E+ +   Y SIDLV  +I+R+LRK + K
Sbjct: 52  VTIPAKGH-VIRSEQVSNDMYVSIDLVEEVIERQLRKYRTK 91

[131][TOP]
>UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH
          Length = 178

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 33/104 (31%), Positives = 61/104 (58%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           ++ II G+N+++++ +K  + +K+G+ ++K+     E+ V LS     +        + E
Sbjct: 1   MRYIISGKNIDVTEGLKSAIYEKIGK-LEKYFNPEAEIHVTLSVEKDRQ--------KIE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
           VT+  K + +VRAE+ +   Y SIDLV  +I+R+L+K K K  D
Sbjct: 52  VTIPMKGN-IVRAEQVSNDMYASIDLVEEVIERQLKKYKSKLKD 94

[132][TOP]
>UniRef100_A3CPW1 30S ribosomal interface protein S30EA, putative n=1
           Tax=Streptococcus sanguinis SK36 RepID=A3CPW1_STRSV
          Length = 180

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 37/115 (32%), Positives = 68/115 (59%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K  I+G N+E++DA++ +V  K+ + I+K+    +E+D R++ +   E     +T + E
Sbjct: 2   LKYSIRGENLEVTDALRDYVVSKLEK-IEKYFQAEQELDARVNLKVYRE-----KTAKVE 55

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRL 566
           VT+       +RAE+ ++  YGSIDLV+  I+R++RK K K     R+    ++L
Sbjct: 56  VTIPLGSI-TLRAEDISQDMYGSIDLVTDKIERQIRKNKTKIERKNRNKVATSQL 109

[133][TOP]
>UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile
           QCD-23m63 RepID=UPI00017F5F53
          Length = 183

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 32/110 (29%), Positives = 63/110 (57%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           + +II G+ +EL+DA+K  +E K+ ++    +Y+  + DV+++        R  R ++ E
Sbjct: 1   MNIIISGKQIELTDAIKNKIESKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK 551
           VT+ T    ++RAE+  E  Y +ID+V   + ++L+K K++  D  +  K
Sbjct: 52  VTIATVNGPIIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNK 101

[134][TOP]
>UniRef100_C2LQ50 Ribosomal subunit interface protein, ribosomal protein S30AE family
           n=1 Tax=Streptococcus salivarius SK126
           RepID=C2LQ50_STRSL
          Length = 182

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 35/101 (34%), Positives = 64/101 (63%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +K  I+G N+E+++A++ +VE K+ +V +K+    +E++ R++ +   E     +T + E
Sbjct: 2   IKYSIRGENIEVTEALRDYVESKLSKV-EKYFNEDQELNARVNLKVYRE-----KTAKVE 55

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK 524
           VT+ T     +RAE+ ++  YGSIDLV   I+R++RK K K
Sbjct: 56  VTIPTGSV-TLRAEDVSQDMYGSIDLVVDKIERQIRKNKTK 95

[135][TOP]
>UniRef100_C0U8U2 SSU ribosomal protein S30P n=1 Tax=Geodermatophilus obscurus DSM
           43160 RepID=C0U8U2_9ACTO
          Length = 228

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRC 398
           ++++++GRN+E+ +  +QHVEDKVG+  +    L +  +DV L         +  + +R 
Sbjct: 1   MEIVVRGRNVEVPEHYRQHVEDKVGQSDRFDGKLKILRIDVELFHEKNPR--QSGKCQRV 58

Query: 399 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKE-KETDHGR 542
           E+TL  K   VVRAE  A   Y ++DL +  +  +LRK  + +   HGR
Sbjct: 59  EITLRGK-GPVVRAEAAAPDFYAALDLAAGKLDHRLRKAADRRRVHHGR 106

[136][TOP]
>UniRef100_C0CJV5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
           DSM 10507 RepID=C0CJV5_9FIRM
          Length = 175

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 34/104 (32%), Positives = 60/104 (57%)
 Frame = +3

Query: 222 VKLIIQGRNMELSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCE 401
           +  II G+N+ ++D ++  VEDK+G+ ++++     E+ V LS     +        + E
Sbjct: 1   MNFIISGKNLTVTDGLRTAVEDKLGK-LERYFTPDTEIIVTLSVEKSRQ--------KIE 51

Query: 402 VTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD 533
           VT+  K + ++R+E+ +   Y SIDLV  +I+R+LRK K K  D
Sbjct: 52  VTIPVKGN-IIRSEQVSNDMYVSIDLVEEVIERQLRKYKTKIVD 94