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[1][TOP]
>UniRef100_A2Q3D2 Putative non-LTR retroelement reverse transcriptase, related
(Fragment) n=1 Tax=Medicago truncatula
RepID=A2Q3D2_MEDTR
Length = 532
Score = 81.6 bits (200), Expect = 4e-14
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
L++RRII+ CV+ G ES LF C +VW V W G+++V P + F
Sbjct: 389 LMRRRIILANVVDCVYECGKLESATHLFLDCRIPTMVWLHVQNWIGISTVSPSQMREHFT 448
Query: 389 SFLACYRKKKNFKGVL-LVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYVPWKWLLA 213
F ++ V ++W A +WV+ + RN R+F+ T S +F+KV+ + WL A
Sbjct: 449 QFTLMAGMPRSSHSVFKVIWFAYVWVIWKDRNNRVFNNTGSNHSVLFEKVKLNSFLWLKA 508
Query: 212 KKVNSLFSFYE*CVNPSNCI 153
K + F +++ +P C+
Sbjct: 509 KCPSLNFGYHDWWQHPLPCL 528
[2][TOP]
>UniRef100_Q2HSY1 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=Q2HSY1_MEDTR
Length = 150
Score = 77.4 bits (189), Expect = 7e-13
Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
LV+R ++ +A+CV G ES LF +C +WS V W G+ V P + F
Sbjct: 7 LVRRNVLSHNDAACVAGCGRSESTTHLFLNCDVFGSLWSYVSLWLGIPLVTPGDLHQHFI 66
Query: 389 SFLACYRKKKNFKGVL-LVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYVPWKWLLA 213
F+ ++ + ++W +W++ + RN+R+F+ PS + +KV+ + WL +
Sbjct: 67 QFINMSGLPRSTELFFKVIWFTSVWIIWKERNDRVFNNKASIPSVLIEKVKLTSFMWLQS 126
Query: 212 KKVNSLFSFYE*CVNPSNCI 153
+ + ++S+++ NP C+
Sbjct: 127 NQASFIYSYHDWWNNPLLCM 146
[3][TOP]
>UniRef100_Q2HUU9 Helix-turn-helix, Fis-type n=1 Tax=Medicago truncatula
RepID=Q2HUU9_MEDTR
Length = 171
Score = 71.6 bits (174), Expect = 4e-11
Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
L+ R +I CV GA ES LF SC+ +WS V W G V + +S F
Sbjct: 29 LIYRGVIPTEAGLCVSGCGALESAQHLFLSCSYFASLWSLVRDWIGFVGVDTNVLSDHFV 88
Query: 389 SFLACYRKKKNFKGVL-LVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYVPWKWLLA 213
F+ K + L L+W WVL RN F+ +I + DKV+Y+ WL A
Sbjct: 89 QFVHSTGGNKASQSFLQLIWLLCAWVLWTERNNMCFNDSITPLPRLLDKVKYLSLGWLKA 148
Query: 212 KKVNSLFSFYE*CVNPSNCI 153
+ + LF + NP C+
Sbjct: 149 RNASFLFGTFSWWSNPLQCL 168
[4][TOP]
>UniRef100_A2Q533 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=A2Q533_MEDTR
Length = 313
Score = 63.9 bits (154), Expect = 8e-09
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
L++R I+ + CV E+ LF SC +VWS + W GL+ V + + +
Sbjct: 182 LLRRNIVQPNNSLCVIGCEVVETAGHLFLSCENYCIVWSLISAWLGLSLVHQNDLQQHYH 241
Query: 389 SFLACYRK---KKNFKGVLLVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYVPWKWL 219
F CY + +W+A +WV+ + RN+RIF + +K++ + W+
Sbjct: 242 QF--CYMAGFPRSTHAYFTGIWYASVWVIWKDRNKRIFQNEASHSLVLMEKIKCNSFFWM 299
Query: 218 LAKKVNSLFSFYE 180
A+ + + FY+
Sbjct: 300 KARNTSFNYCFYD 312
[5][TOP]
>UniRef100_B9NAZ1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NAZ1_POPTR
Length = 325
Score = 62.8 bits (151), Expect = 2e-08
Identities = 38/142 (26%), Positives = 62/142 (43%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
L +RRII +A C FC E+ + LF C T+W +W ++ WFG LP + +
Sbjct: 183 LAKRRIINYEDALCPFCCKEIETIHHLFHLCPTSWSLWGRLFRWFGRVGCLPKDPNHNLQ 242
Query: 389 SFLACYRKKKNFKGVLLVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYVPWKWLLAK 210
+ + + + L+ + W + +RN IF + IFD + WL +
Sbjct: 243 EWSGLLKGNFQRQAITLLCKGLYWSIWIARNNMIFDSKTPDWDVIFDLTFHRLAFWLKSS 302
Query: 209 KVNSLFSFYE*CVNPSNCIARW 144
N ++ + NP CI W
Sbjct: 303 VKNFSYTGSDLYRNP-ECIMNW 323
[6][TOP]
>UniRef100_Q2HUJ1 H+-transporting two-sector ATPase, alpha/beta subunit, central
region, related n=1 Tax=Medicago truncatula
RepID=Q2HUJ1_MEDTR
Length = 250
Score = 62.4 bits (150), Expect = 2e-08
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
LV+R I+ + CV G E+ LF C + VW + W G + V P SI +
Sbjct: 108 LVRRLILQPNDNLCVGGCGLSETTGHLFIGCESFGSVWVLLCHWLGFSFVPPGSIKDHYI 167
Query: 389 SF--LACYRKKKN--FKGVLLVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYVPWKW 222
F LA + + FK ++W A +W + + RN R+F+ T+ + I +KV+ + W
Sbjct: 168 QFTHLAGLSRSTHVFFK---VIWLACVWAIWKERNNRVFNDTVIDLLHIVEKVKLNSFLW 224
Query: 221 LLAKKVNSLFSFYE*CVNPSNCI 153
L + F FY+ +P C+
Sbjct: 225 LSSNIEPIAFGFYDWWRHPLYCM 247
[7][TOP]
>UniRef100_Q2HTK5 H+-transporting two-sector ATPase, alpha/beta subunit, central
region n=1 Tax=Medicago truncatula RepID=Q2HTK5_MEDTR
Length = 250
Score = 62.4 bits (150), Expect = 2e-08
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
L+ R +I CV G+ E+ + L C +W ++ W +SV P + F
Sbjct: 108 LISRGVISTDARLCVAGCGSEETSDHLLLHCNIFGTIWHYIYRWLNFSSVSPCDVGDHFI 167
Query: 389 SFLACYRKKKNFKGVLLV-WHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYVPWKWLLA 213
F A K +L V W A W + + RN RIF+G ++ DK++ + + WL A
Sbjct: 168 QFTALGGLAKTRHSILQVLWFATSWEIWKERNNRIFTGKQCSILQVVDKIKSLSFMWLKA 227
Query: 212 K 210
K
Sbjct: 228 K 228
[8][TOP]
>UniRef100_B9HA04 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HA04_POPTR
Length = 1285
Score = 60.8 bits (146), Expect = 7e-08
Identities = 35/135 (25%), Positives = 60/135 (44%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
L +RRII +A C FC E+ + LF C T+W +W ++ WFG LP + +
Sbjct: 1143 LAKRRIINYEDALCPFCCKEIETIHHLFHLCPTSWSLWGRLFRWFGCVGCLPKDPNHNLQ 1202
Query: 389 SFLACYRKKKNFKGVLLVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYVPWKWLLAK 210
+ + + + L+ + W + +RN IF + IFD + WL +
Sbjct: 1203 EWSGLLKGNFQRQAITLLCKGLYWSIWIARNNMIFDSKTPDWDVIFDLTFHRLAFWLKSS 1262
Query: 209 KVNSLFSFYE*CVNP 165
N ++ ++ NP
Sbjct: 1263 VKNFSYTGFDLYRNP 1277
[9][TOP]
>UniRef100_B9NB08 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NB08_POPTR
Length = 242
Score = 60.5 bits (145), Expect = 9e-08
Identities = 33/112 (29%), Positives = 58/112 (51%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
LV+R ++ +++C C ES + L C W++WSK+ W+GL+ P ++S LF
Sbjct: 13 LVRRSVLDRSDSNCPNCLVEEESVHHLILHCHKHWIIWSKIIKWWGLSWCCPKNLSGLFS 72
Query: 389 SFLACYRKKKNFKGVLLVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYV 234
+ K K L+++ +V W L RN+ IF ++ S +D V ++
Sbjct: 73 QWTFMVHGKFQKKAWLMLFFSVAWSLWLLRNDLIF----QQKSPNYDSVFFL 120
[10][TOP]
>UniRef100_B9NGM3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NGM3_POPTR
Length = 124
Score = 58.9 bits (141), Expect = 3e-07
Identities = 33/111 (29%), Positives = 54/111 (48%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
LV+R I+ A+C C E + LF C WL+WSK+ W+GL P +++ LF
Sbjct: 13 LVKRDILDTSAANCPICLVEEEMVDHLFIHCYKHWLIWSKLINWWGLAWCCPRNLTNLFS 72
Query: 389 SFLACYRKKKNFKGVLLVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQY 237
+ + K K ++++ +V W + RN+ IF I +F + Y
Sbjct: 73 QWDSLVYGKFQKKAWVMLFFSVTWSMWLLRNDVIFKQKIPNYDTLFFLIVY 123
[11][TOP]
>UniRef100_B9HC32 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HC32_POPTR
Length = 670
Score = 58.2 bits (139), Expect = 4e-07
Identities = 32/106 (30%), Positives = 51/106 (48%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
LV+R I+ A+C C ES + + C W+VWSK+ W+GL P +++ LF
Sbjct: 372 LVRRGILDISAAACPICLAEEESVDHILLHCHKHWIVWSKIINWWGLAWCCPKNLAALFS 431
Query: 389 SFLACYRKKKNFKGVLLVWHAVIWVLCRSRNERIFSGTIEEPSEIF 252
+ + K K L++ +V W L RN+ IF + +F
Sbjct: 432 QWDSLVYGKFQKKAWLMLLFSVAWSLWLHRNDVIFKQSTPNYDTLF 477
[12][TOP]
>UniRef100_B9GV42 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GV42_POPTR
Length = 406
Score = 57.8 bits (138), Expect = 6e-07
Identities = 35/119 (29%), Positives = 55/119 (46%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
LV+R I+ A+C C E + LF C WL+WSK+ W GL P +++ LF
Sbjct: 108 LVKRGILDTSAANCPICLVEEEMVDHLFIHCYKHWLIWSKIINWCGLAWCCPRNLANLFS 167
Query: 389 SFLACYRKKKNFKGVLLVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYVPWKWLLA 213
+ + K K ++++ +V W + RN+ IF I +F + WL A
Sbjct: 168 QWDSLVYGKFQKKAWVILFFSVAWSMWLLRNDVIFKQKIPNYDTLFFLIVTRLCLWLKA 226
[13][TOP]
>UniRef100_A4Q7N6 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=A4Q7N6_MEDTR
Length = 179
Score = 57.8 bits (138), Expect = 6e-07
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
L +R ++ + ++ CV G E+ + L C + +W K+ W + L ++
Sbjct: 50 LCRRGVLNESQSECVNGCGVVETTSHLLFECPASIGLWQKILLWLNHSCALHNNALQNLN 109
Query: 389 SFLACY-RKKKNFKGVLLVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYVPWKWLLA 213
F R + + + ++W A +W+L RNE+IFS + ++V + WKW ++
Sbjct: 110 QFAGLAGRGRVHEARISVIWFACVWILWNRRNEKIFSNITSSEDDWIEEVNTLSWKWTIS 169
[14][TOP]
>UniRef100_B9P4W2 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9P4W2_POPTR
Length = 174
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/119 (29%), Positives = 54/119 (45%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
LV+R I+ A+C C E + LF C WL+WSK+ W GL P ++ LF
Sbjct: 13 LVKRGILDTSAANCPICLVEEEMVDHLFIHCYKHWLIWSKIINWCGLAWCCPRNLPNLFS 72
Query: 389 SFLACYRKKKNFKGVLLVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYVPWKWLLA 213
+ + K K ++++ +V W + RN+ IF I +F + WL A
Sbjct: 73 QWDSLVYGKFQKKAWVMLFFSVAWSMWLLRNDVIFKQKIPNYDTLFFLIVTRLCLWLKA 131
[15][TOP]
>UniRef100_Q2HW20 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=Q2HW20_MEDTR
Length = 192
Score = 55.8 bits (133), Expect = 2e-06
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = -1
Query: 461 VWSKVHWWFGLTSVLPDSIS-----FLFESFLACYRKKKNFKGVLLVWHAVIWVLCRSRN 297
VW VH W + V P SIS F S A +R + L+W A IWV+ + N
Sbjct: 86 VWYLVHHWLSVPLVNPLSISNHYLQFRISSGFAIFR----CSFMHLLWFASIWVIWKEMN 141
Query: 296 ERIFSGTIEEPSEIFDKVQYVPWKWLLAKKVNSLFSFYE*CVNPSNCI 153
RIF ++ + ++ + + W A ++ + FY+ NP +C+
Sbjct: 142 ARIFRAKESTMHQLLENIKLISFSWFKANSISFYYKFYDWSQNPFHCV 189
[16][TOP]
>UniRef100_B9GGF6 Glutamate-gated kainate-type ion channel receptor subunit GluR5 n=1
Tax=Populus trichocarpa RepID=B9GGF6_POPTR
Length = 1005
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/95 (29%), Positives = 45/95 (47%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
L +RRII EA C FC E+ + LF C T+W +W ++ WFG LP + +
Sbjct: 905 LAKRRIINYEEALCPFCCKEIETIHHLFHLCPTSWSLWGRLFSWFGCVGCLPKDPNHNLQ 964
Query: 389 SFLACYRKKKNFKGVLLVWHAVIWVLCRSRNERIF 285
+ + + + L+ + W + +RN IF
Sbjct: 965 EWSGLLKGNFQRQAITLLCKGLYWSIWIARNNMIF 999
[17][TOP]
>UniRef100_Q2HV58 Putative non-LTR retroelement reverse transcriptase, related n=1
Tax=Medicago truncatula RepID=Q2HV58_MEDTR
Length = 373
Score = 55.5 bits (132), Expect = 3e-06
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 1/140 (0%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
L +R ++ SC G E + LF C +W + W G +V ++
Sbjct: 230 LRKRNVLEATYVSCGALCGKEEEMDHLFFQCDYYGQLWLLISNWLGFVTVFHGNLYTHDN 289
Query: 389 SFLACYRKKKN-FKGVLLVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYVPWKWLLA 213
F A KN K ++W +V++ + + RN RIF I+ + ++V+ + WL A
Sbjct: 290 QFCALRDFSKNSMKAFTIIWISVLFTIWKDRNRRIFQNQIDHLEALLERVKLQTFWWLKA 349
Query: 212 KKVNSLFSFYE*CVNPSNCI 153
+ F + NP C+
Sbjct: 350 NYITFAFDYPFWRQNPLCCL 369
[18][TOP]
>UniRef100_Q2HTU8 H+-transporting two-sector ATPase, alpha/beta subunit, central
region, related n=1 Tax=Medicago truncatula
RepID=Q2HTU8_MEDTR
Length = 248
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
L +R ++ SC G E ++ LF C +W + W G +V ++
Sbjct: 108 LRKRNVLEATNVSCGALCGKEEKRDHLFFQCAYYGRLWLMLSDWLGFVTVFNGNLYTHAN 167
Query: 389 SFLACYRKKKNF-KGVLLVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYVPWKWLLA 213
F A KN+ K ++W +V++ + + RN RIF I + ++V+ + WL A
Sbjct: 168 QFCALGGFSKNYMKAFTIIWISVLYTIWKDRNRRIFQNQIVLLEVLLERVKLQTFWWLKA 227
Query: 212 KKVNSLFSFY 183
+ LF FY
Sbjct: 228 NYI--LFVFY 235
[19][TOP]
>UniRef100_B9H021 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H021_POPTR
Length = 677
Score = 54.7 bits (130), Expect = 5e-06
Identities = 32/112 (28%), Positives = 55/112 (49%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
LV+R ++ ++C C ES + L C +WSK+ W+GL+ P ++S LF
Sbjct: 439 LVRRGVLDSSNSNCPICLVEEESVDHLILLCYKHLTIWSKIIKWWGLSWCCPKNLSGLFS 498
Query: 389 SFLACYRKKKNFKGVLLVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYV 234
+ K K L+++ +V W L RN+ IF ++ S +D V ++
Sbjct: 499 QWTFMVHGKFQKKAWLMLFFSVAWSLWLLRNDLIF----QQKSPNYDSVFFL 546
[20][TOP]
>UniRef100_Q2HVA2 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=Q2HVA2_MEDTR
Length = 355
Score = 53.9 bits (128), Expect = 8e-06
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Frame = -1
Query: 569 LVQRRIIIDGEASCVFCAGARESKNQLFSSCTTAWLVWSKVHWWFGLTSVLPDSISFLFE 390
L +R ++ + CV G E+ LF C VW+ + W G+ + L + F
Sbjct: 213 LFRRNVVNFDDQFCVGGCGLPETSTHLFLHCNLFASVWNFILQWVGVATSLNQDVVGHFT 272
Query: 389 SFLACYRKKKNFKGVL-LVWHAVIWVLCRSRNERIFSGTIEEPSEIFDKVQYVPWKWLLA 213
F + K+ + +L ++W A++W + + + IF ++ D ++ + +KWL
Sbjct: 273 QFRSLGGIAKSRQSILQVIWCAIVWKIWKEKINMIFDDKHSSIVQVVDMIKLLTYKWLKV 332
Query: 212 KKVNSLFSFY 183
K + F+++
Sbjct: 333 KYASLPFNYH 342