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[1][TOP]
>UniRef100_P48513 Transcription initiation factor IIB n=1 Tax=Glycine max
RepID=TF2B_SOYBN
Length = 313
Score = 302 bits (773), Expect = 1e-80
Identities = 150/161 (93%), Positives = 156/161 (96%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE G +VEMGTIHAGD
Sbjct: 153 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLENGNAVEMGTIHAGD 212
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
FMRRFCSNL MN+QAVKAAQEAV+K+EEFDIRRSPISIAAA+IYIITQLSDDKKPLKDIS
Sbjct: 213 FMRRFCSNLCMNNQAVKAAQEAVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDIS 272
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
+ATGVAEGTIRNSYKDLYPHVSKIIP WYAKEEDLKNL SP
Sbjct: 273 LATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 313
[2][TOP]
>UniRef100_B9T8A1 Transcription initiation factor iib, putative n=1 Tax=Ricinus
communis RepID=B9T8A1_RICCO
Length = 312
Score = 296 bits (759), Expect = 6e-79
Identities = 148/161 (91%), Positives = 156/161 (96%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE GQSVEMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETGQSVEMGTIHAGD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
FMRRFCSNL MN+QA+KAAQEAV+K+EEFDIRRSPISIAAA+IYII+QLSDDKK L+DIS
Sbjct: 212 FMRRFCSNLGMNNQAMKAAQEAVQKSEEFDIRRSPISIAAAVIYIISQLSDDKKLLRDIS 271
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
ATGVAEGTIRNSYKDLYPHVSKIIP+WYAKEEDLKNL SP
Sbjct: 272 HATGVAEGTIRNSYKDLYPHVSKIIPSWYAKEEDLKNLCSP 312
[3][TOP]
>UniRef100_Q9SS44 Transcription initiation factor IIB-2 n=2 Tax=Arabidopsis thaliana
RepID=TF2B2_ARATH
Length = 312
Score = 295 bits (756), Expect = 1e-78
Identities = 145/161 (90%), Positives = 154/161 (95%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE GQ VEMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETGQLVEMGTIHAGD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
FMRRFCSNL M +Q VKAAQE+V+K+EEFDIRRSPISIAAA+IYIITQLSD+KKPL+DIS
Sbjct: 212 FMRRFCSNLGMTNQTVKAAQESVQKSEEFDIRRSPISIAAAVIYIITQLSDEKKPLRDIS 271
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
+ATGVAEGTIRNSYKDLYPH+SKIIP WYAKEEDLKNL SP
Sbjct: 272 VATGVAEGTIRNSYKDLYPHLSKIIPAWYAKEEDLKNLQSP 312
[4][TOP]
>UniRef100_B9H9K1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H9K1_POPTR
Length = 312
Score = 295 bits (755), Expect = 2e-78
Identities = 146/161 (90%), Positives = 153/161 (95%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE GQSVEMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEAGQSVEMGTIHAGD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
FMRRFCSNL M++ VKAA EAVK +E+FDIRRSPISIAAA+IYIITQLSDDKKPL+DIS
Sbjct: 212 FMRRFCSNLGMSNHTVKAATEAVKTSEQFDIRRSPISIAAAVIYIITQLSDDKKPLRDIS 271
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
+ATGVAEGTIRNSYKDLYPHVSKIIP WYA EEDLKNLSSP
Sbjct: 272 LATGVAEGTIRNSYKDLYPHVSKIIPAWYANEEDLKNLSSP 312
[5][TOP]
>UniRef100_B9II90 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9II90_POPTR
Length = 312
Score = 293 bits (751), Expect = 5e-78
Identities = 145/161 (90%), Positives = 153/161 (95%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE GQSVEMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETGQSVEMGTIHAGD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
FMRRFCSNL M++ VKAA EAVK +E+FDIRRSPISIAAA+IYIITQLSDDKKPL+DIS
Sbjct: 212 FMRRFCSNLGMSNHTVKAATEAVKTSEQFDIRRSPISIAAAVIYIITQLSDDKKPLRDIS 271
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
+ATGVAEGTIRNSYKDLYPHVSKIIP+WYA EEDLKNL SP
Sbjct: 272 LATGVAEGTIRNSYKDLYPHVSKIIPSWYASEEDLKNLCSP 312
[6][TOP]
>UniRef100_A7PWI7 Chromosome chr8 scaffold_34, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PWI7_VITVI
Length = 312
Score = 292 bits (747), Expect = 1e-77
Identities = 144/161 (89%), Positives = 154/161 (95%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL EKGQSVEMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEAEKGQSVEMGTIHAGD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
FMRRFCSNL M +Q VKAAQEAV+K+EEFDIRRSP+SIAAA+IYIITQLSD+KK L+DIS
Sbjct: 212 FMRRFCSNLGMTNQVVKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDIS 271
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
IATGVAEGTIRNSYKDLYPH+SKIIP+WYAKEEDL+NL SP
Sbjct: 272 IATGVAEGTIRNSYKDLYPHISKIIPSWYAKEEDLRNLCSP 312
[7][TOP]
>UniRef100_A7QJY1 Chromosome undetermined scaffold_109, whole genome shotgun sequence
n=1 Tax=Vitis vinifera RepID=A7QJY1_VITVI
Length = 312
Score = 291 bits (744), Expect = 3e-77
Identities = 143/161 (88%), Positives = 154/161 (95%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL EKGQSVEMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEAEKGQSVEMGTIHAGD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
FMRRFCSNL M +Q VKAAQEAV+K+EEFDIRRSP+SIAAA+IYIITQLSD+KK L+DIS
Sbjct: 212 FMRRFCSNLGMTNQVVKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDIS 271
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
IATGVAEGTIRNSYKDLYPH+S+IIP+WYAKEEDL+NL SP
Sbjct: 272 IATGVAEGTIRNSYKDLYPHISRIIPSWYAKEEDLRNLCSP 312
[8][TOP]
>UniRef100_A5BBG2 Putative uncharacterized protein (Fragment) n=1 Tax=Vitis vinifera
RepID=A5BBG2_VITVI
Length = 312
Score = 291 bits (744), Expect = 3e-77
Identities = 143/161 (88%), Positives = 154/161 (95%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL EKGQSVEMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEAEKGQSVEMGTIHAGD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
FMRRFCSNL M +Q VKAAQEAV+K+EEFDIRRSP+SIAAA+IYIITQLSD+KK L+DIS
Sbjct: 212 FMRRFCSNLGMTNQVVKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDIS 271
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
IATGVAEGTIRNSYKDLYPH+S+IIP+WYAKEEDL+NL SP
Sbjct: 272 IATGVAEGTIRNSYKDLYPHISRIIPSWYAKEEDLRNLCSP 312
[9][TOP]
>UniRef100_P48512 Transcription initiation factor IIB-1 n=2 Tax=Arabidopsis thaliana
RepID=TF2B1_ARATH
Length = 312
Score = 285 bits (729), Expect = 2e-75
Identities = 140/161 (86%), Positives = 152/161 (94%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQEDKPRT+KEIC +ANGATKKEIGRAK+YIVK LGLE GQSV++GTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTIKEICVIANGATKKEIGRAKDYIVKTLGLEPGQSVDLGTIHAGD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
FMRRFCSNL M++ AVKAAQEAV+K+EEFDIRRSPISIAA +IYIITQLSDDKK LKDIS
Sbjct: 212 FMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDIS 271
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
ATGVAEGTIRNSYKDLYPH+SKI P+WYAKEEDLKNLSSP
Sbjct: 272 HATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 312
[10][TOP]
>UniRef100_B9RIF2 Transcription initiation factor iib, putative n=1 Tax=Ricinus
communis RepID=B9RIF2_RICCO
Length = 312
Score = 278 bits (711), Expect = 2e-73
Identities = 138/161 (85%), Positives = 152/161 (94%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL +E GQS+EMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEVELGQSMEMGTIHAGD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
F+RRFCS+L MN+QAVKAAQEAVKK+EE DIRRSPISIAAAIIY+ITQLS++KK LKDIS
Sbjct: 212 FLRRFCSHLGMNNQAVKAAQEAVKKSEELDIRRSPISIAAAIIYMITQLSEEKKLLKDIS 271
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
+TGVAEGTIRNSYKDLYP+ S+I+P+WYAKEEDL NL SP
Sbjct: 272 TSTGVAEGTIRNSYKDLYPYASRIVPSWYAKEEDLINLCSP 312
[11][TOP]
>UniRef100_Q8W0W3 Transcription initiation factor IIB n=3 Tax=Oryza sativa
RepID=TF2B_ORYSJ
Length = 312
Score = 278 bits (710), Expect = 3e-73
Identities = 136/161 (84%), Positives = 152/161 (94%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAGD
Sbjct: 152 AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
F+RRFCS L MN+QAVKAAQEAV+++EE DIRRSPISIAAA+IY+ITQLSDDKKPLKDIS
Sbjct: 212 FLRRFCSTLGMNNQAVKAAQEAVQRSEELDIRRSPISIAAAVIYMITQLSDDKKPLKDIS 271
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
+ATGVAEGTIRNSYKDLYP+ S++IP YAKEEDLKNL +P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312
[12][TOP]
>UniRef100_A7PQV4 Chromosome chr6 scaffold_25, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PQV4_VITVI
Length = 314
Score = 275 bits (704), Expect = 1e-72
Identities = 136/161 (84%), Positives = 152/161 (94%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AAC+YIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL +E GQS+EMGTIHAGD
Sbjct: 154 AACIYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
F+RRFCS+L M +QAVKAAQEAV+K+EE DIRRSPIS+AAA+IY+ITQLSDDKK LKDIS
Sbjct: 214 FLRRFCSHLGMTNQAVKAAQEAVQKSEELDIRRSPISVAAAVIYMITQLSDDKKLLKDIS 273
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
+ATGVAEGTIRNSYKDLYP+ S+IIP+ YAKEEDL+NL SP
Sbjct: 274 LATGVAEGTIRNSYKDLYPYASRIIPSSYAKEEDLRNLCSP 314
[13][TOP]
>UniRef100_C5X694 Putative uncharacterized protein Sb02g031020 n=1 Tax=Sorghum
bicolor RepID=C5X694_SORBI
Length = 312
Score = 275 bits (703), Expect = 2e-72
Identities = 134/161 (83%), Positives = 152/161 (94%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAGD
Sbjct: 152 AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
F+RRFCS L MN+QAVKAAQEAV+++EE DIRRSPISIAAA+IY+ITQLS+DKKPLKDIS
Sbjct: 212 FLRRFCSTLGMNNQAVKAAQEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDIS 271
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
+ATGVAEGTIRNSYKDLYP+ +++IP YAKEEDLKNL +P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYAARLIPNTYAKEEDLKNLCTP 312
[14][TOP]
>UniRef100_B4FHS1 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FHS1_MAIZE
Length = 312
Score = 272 bits (696), Expect = 1e-71
Identities = 133/161 (82%), Positives = 151/161 (93%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAG+
Sbjct: 152 AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGN 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
F+RRFCS L MN+QAV+AAQ+AVK +EE DIRRSPISIAAA+IY+ITQLS+DKKPLKDIS
Sbjct: 212 FLRRFCSTLGMNNQAVRAAQDAVKHSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDIS 271
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
+ATGVAEGTIRNSYKDLYP+ S++IP YAKEEDLKNL +P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312
[15][TOP]
>UniRef100_B6THD9 Transcription initiation factor IIB n=1 Tax=Zea mays
RepID=B6THD9_MAIZE
Length = 312
Score = 270 bits (691), Expect = 5e-71
Identities = 132/161 (81%), Positives = 150/161 (93%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAGD
Sbjct: 152 AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
F+RRFCS L M +QAV AA+EAV+++EE DIRRSPISIAAA+IY+ITQLS+DKKPLKDIS
Sbjct: 212 FLRRFCSTLGMTNQAVNAAKEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDIS 271
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
+ATGVAEGTIRNSYKDLYP+ S++IP YAKEEDLKNL +P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312
[16][TOP]
>UniRef100_B4FRH0 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FRH0_MAIZE
Length = 198
Score = 270 bits (691), Expect = 5e-71
Identities = 132/161 (81%), Positives = 150/161 (93%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAGD
Sbjct: 38 AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGD 97
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
F+RRFCS L M +QAV AA+EAV+++EE DIRRSPISIAAA+IY+ITQLS+DKKPLKDIS
Sbjct: 98 FLRRFCSTLGMTNQAVNAAKEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDIS 157
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
+ATGVAEGTIRNSYKDLYP+ S++IP YAKEEDLKNL +P
Sbjct: 158 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 198
[17][TOP]
>UniRef100_B8LMH3 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LMH3_PICSI
Length = 313
Score = 266 bits (680), Expect = 9e-70
Identities = 130/161 (80%), Positives = 148/161 (91%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQEDKPRTVKEICSVANGA+KKE+GRAKE+IVKQL E G+S+EMGTIHAGD
Sbjct: 153 AACLYIACRQEDKPRTVKEICSVANGASKKEVGRAKEFIVKQLEEEMGKSMEMGTIHAGD 212
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
F+RRFCS+L M HQAVKAA EAVKK+EE DIRRSPISIAAA IY+I+QLS++KK L+DIS
Sbjct: 213 FLRRFCSHLGMGHQAVKAATEAVKKSEELDIRRSPISIAAAAIYMISQLSEEKKLLRDIS 272
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
ATGVAEGTIRNSYKDLYPH +++IP W+AKEEDLKNL +P
Sbjct: 273 RATGVAEGTIRNSYKDLYPHAARLIPDWFAKEEDLKNLCAP 313
[18][TOP]
>UniRef100_B9IEI3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IEI3_POPTR
Length = 311
Score = 257 bits (657), Expect = 4e-67
Identities = 126/160 (78%), Positives = 143/160 (89%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQE+K RTVKEICSV NG TKKEIGRAKE+IVK L +E G S+EMGTIHA D
Sbjct: 152 AACLYIACRQENKARTVKEICSVVNGTTKKEIGRAKEFIVKHLEVEMGHSMEMGTIHAAD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
++RRFCSNL M +QAVKAA EAV+K+EE DIRRSPISIAAA+IYII QLSDDKKPLKDIS
Sbjct: 212 YLRRFCSNLGMTNQAVKAAHEAVQKSEELDIRRSPISIAAAVIYIIIQLSDDKKPLKDIS 271
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSS 99
+ T VAEGTI+NSYKDL PH+S+IIP+W+AKEED+KNL S
Sbjct: 272 VVTQVAEGTIKNSYKDLSPHLSQIIPSWFAKEEDIKNLHS 311
[19][TOP]
>UniRef100_A9T0Q7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9T0Q7_PHYPA
Length = 312
Score = 228 bits (582), Expect = 2e-58
Identities = 116/163 (71%), Positives = 137/163 (84%), Gaps = 2/163 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVK-EICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG 402
AACLYIACRQEDKPRT K EICSVANGA+KK+IGRA ++IVKQL + G S+EMGTIHAG
Sbjct: 150 AACLYIACRQEDKPRTFKAEICSVANGASKKDIGRATKFIVKQLEEDMGISMEMGTIHAG 209
Query: 401 DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSD-DKKPLKD 225
DF+RRFCS+LNM + V+AA E VKK+E DIR+SPIS+AAA IY+I+QL++ DKK LKD
Sbjct: 210 DFLRRFCSHLNMENNEVRAATETVKKSEMLDIRKSPISVAAAAIYMISQLNEKDKKALKD 269
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
IS GVAE TIRNSYKDLYPH +K+IP W+ KE DLKNL +P
Sbjct: 270 ISRVAGVAEVTIRNSYKDLYPHAAKLIPDWFLKEVDLKNLPAP 312
[20][TOP]
>UniRef100_A9RXM3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RXM3_PHYPA
Length = 312
Score = 186 bits (472), Expect = 1e-45
Identities = 96/160 (60%), Positives = 122/160 (76%), Gaps = 2/160 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKE-ICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG 402
A+CLYIACRQEDKPRT KE ICSV+NGA+K + GR + +VKQ+ G S+EMGTIHAG
Sbjct: 150 ASCLYIACRQEDKPRTFKEEICSVSNGASKTDTGRITKKLVKQIEKGMGISMEMGTIHAG 209
Query: 401 DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSD-DKKPLKD 225
DF RRFCS+L+M V+A E VKK+E I RSP+S+AAA I++I+QL++ DKK LKD
Sbjct: 210 DFSRRFCSHLDMEKNEVRAITETVKKSEMLVIGRSPLSVAAAAIFMISQLNEKDKKELKD 269
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNL 105
IS GV E +IR Y++LYPH SK+IP W+ K+ DLK+L
Sbjct: 270 ISRVAGVNEESIRFMYRELYPHASKLIPEWFLKDVDLKHL 309
[21][TOP]
>UniRef100_B9IK69 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IK69_POPTR
Length = 297
Score = 181 bits (459), Expect = 4e-44
Identities = 88/161 (54%), Positives = 120/161 (74%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACL+I+ R+ PRT+ EI SV G TKKEI +A + I + + LE +MGT++ +
Sbjct: 142 AACLFISSRENKLPRTLNEISSVVYGVTKKEINKAVQSIKRHVELE-----DMGTLNPSE 196
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
+RRFCSNL M + AVKA EAV+K ++ DIRR+P S+ AAIIY ITQLSD+KKPL+DIS
Sbjct: 197 LVRRFCSNLGMKNHAVKAVHEAVEKIQDVDIRRNPKSVLAAIIYTITQLSDEKKPLRDIS 256
Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
+A VAEGTI+ S+KD+ PHVS+++P WYA+EED++ + P
Sbjct: 257 LAADVAEGTIKKSFKDISPHVSRLVPKWYAREEDIRRIRIP 297
[22][TOP]
>UniRef100_C5YUY2 Putative uncharacterized protein Sb09g027310 n=1 Tax=Sorghum
bicolor RepID=C5YUY2_SORBI
Length = 311
Score = 148 bits (374), Expect = 3e-34
Identities = 75/147 (51%), Positives = 103/147 (70%), Gaps = 3/147 (2%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSV--ANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHA 405
AACLY+ACR E KPRT KE+ +V A + KKEIG+ I K LG E GQ +++G + A
Sbjct: 163 AACLYVACRNEGKPRTYKELATVTAAGASAKKEIGKMTTLIKKVLGEEAGQVMDIGVVRA 222
Query: 404 GDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPLK 228
D+MRRFCS L M +Q ++AAQEA ++ E D+RR+P SIAAAI Y++ Q + K ++
Sbjct: 223 ADYMRRFCSRLGMGNQEMRAAQEAARRLENGLDVRRNPESIAAAISYMVVQRAGAGKTVR 282
Query: 227 DISIATGVAEGTIRNSYKDLYPHVSKI 147
D+S+ATGVAE TI+ ++KDL PH +
Sbjct: 283 DVSMATGVAEATIKEAHKDLTPHAEML 309
[23][TOP]
>UniRef100_Q5KQD1 Os05g0548200 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q5KQD1_ORYSJ
Length = 316
Score = 143 bits (361), Expect = 8e-33
Identities = 75/146 (51%), Positives = 104/146 (71%), Gaps = 4/146 (2%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVA--NGATKKEIGRAKEYIVKQLGLE-KGQSVEMGTIH 408
AACL+IACR E PRT KE+ SV A KKEIGR I K LG + +G+++++G +
Sbjct: 166 AACLFIACRNEGMPRTYKELASVTAEGAAAKKEIGRLTTLIKKHLGDQGEGRAMDIGVVR 225
Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPL 231
+ D++RRFCS L + HQ V+AA +AV++ EE D+RR+P SIAAAIIY++ Q + K +
Sbjct: 226 STDYLRRFCSRLGLGHQDVRAAGDAVRRLEERLDVRRNPESIAAAIIYMVVQRAGGSKSV 285
Query: 230 KDISIATGVAEGTIRNSYKDLYPHVS 153
+D+S ATGVAEGTI ++K+L PH S
Sbjct: 286 RDVSTATGVAEGTITAAHKELAPHAS 311
[24][TOP]
>UniRef100_B9FLG0 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9FLG0_ORYSJ
Length = 287
Score = 143 bits (361), Expect = 8e-33
Identities = 75/146 (51%), Positives = 104/146 (71%), Gaps = 4/146 (2%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVA--NGATKKEIGRAKEYIVKQLGLE-KGQSVEMGTIH 408
AACL+IACR E PRT KE+ SV A KKEIGR I K LG + +G+++++G +
Sbjct: 137 AACLFIACRNEGMPRTYKELASVTAEGAAAKKEIGRLTTLIKKHLGDQGEGRAMDIGVVR 196
Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPL 231
+ D++RRFCS L + HQ V+AA +AV++ EE D+RR+P SIAAAIIY++ Q + K +
Sbjct: 197 STDYLRRFCSRLGLGHQDVRAAGDAVRRLEERLDVRRNPESIAAAIIYMVVQRAGGSKSV 256
Query: 230 KDISIATGVAEGTIRNSYKDLYPHVS 153
+D+S ATGVAEGTI ++K+L PH S
Sbjct: 257 RDVSTATGVAEGTITAAHKELAPHAS 282
[25][TOP]
>UniRef100_A2Y747 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2Y747_ORYSI
Length = 319
Score = 143 bits (361), Expect = 8e-33
Identities = 75/146 (51%), Positives = 104/146 (71%), Gaps = 4/146 (2%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVA--NGATKKEIGRAKEYIVKQLGLE-KGQSVEMGTIH 408
AACL+IACR E PRT KE+ SV A KKEIGR I K LG + +G+++++G +
Sbjct: 169 AACLFIACRNEGMPRTYKELASVTAEGAAAKKEIGRLTTLIKKHLGDQGEGRAMDIGVVR 228
Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPL 231
+ D++RRFCS L + HQ V+AA +AV++ EE D+RR+P SIAAAIIY++ Q + K +
Sbjct: 229 STDYLRRFCSRLGLGHQDVRAAGDAVRRLEERLDVRRNPESIAAAIIYMVVQRAGGSKSV 288
Query: 230 KDISIATGVAEGTIRNSYKDLYPHVS 153
+D+S ATGVAEGTI ++K+L PH S
Sbjct: 289 RDVSTATGVAEGTITAAHKELAPHAS 314
[26][TOP]
>UniRef100_Q6S7A3 Mutant TFIIB3 (Fragment) n=1 Tax=Arabidopsis thaliana
RepID=Q6S7A3_ARATH
Length = 336
Score = 139 bits (350), Expect = 2e-31
Identities = 76/159 (47%), Positives = 105/159 (66%), Gaps = 4/159 (2%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ---SVEMGTIH 408
AA + ACR+ RT+KEI VANG KK+I KE +V + LE Q S I+
Sbjct: 162 AASVSTACRELQLSRTLKEIAEVANGVDKKDI--RKESLVIKRVLESHQTSVSASQAIIN 219
Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSD-DKKPL 231
GD +RRFCS L+++ + + A EAV+KAE FDIRR+P S+ AAII++I+ +S ++KP+
Sbjct: 220 TGDLVRRFCSKLDISQREIMAIPEAVEKAENFDIRRNPKSVLAAIIFMISHISQTNRKPI 279
Query: 230 KDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDL 114
++I I V E TI+NS KD+YP+ KIIP WYA E D+
Sbjct: 280 REIGIVAEVVENTIKNSVKDMYPYALKIIPNWYACESDI 318
[27][TOP]
>UniRef100_Q9LIA6 Transcription initiation factor IIB (TFIIB)-like protein n=1
Tax=Arabidopsis thaliana RepID=Q9LIA6_ARATH
Length = 336
Score = 137 bits (346), Expect = 5e-31
Identities = 75/159 (47%), Positives = 105/159 (66%), Gaps = 4/159 (2%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ---SVEMGTIH 408
AA + ACR+ RT+KEI VANG KK+I KE +V + LE Q S I+
Sbjct: 162 AASVSTACRELQLSRTLKEIAEVANGVDKKDI--RKESLVIKRVLESHQTSVSASQAIIN 219
Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSD-DKKPL 231
G+ +RRFCS L+++ + + A EAV+KAE FDIRR+P S+ AAII++I+ +S ++KP+
Sbjct: 220 TGELVRRFCSKLDISQREIMAIPEAVEKAENFDIRRNPKSVLAAIIFMISHISQTNRKPI 279
Query: 230 KDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDL 114
++I I V E TI+NS KD+YP+ KIIP WYA E D+
Sbjct: 280 REIGIVAEVVENTIKNSVKDMYPYALKIIPNWYACESDI 318
[28][TOP]
>UniRef100_Q9M2L0 Putative uncharacterized protein F28O9.220 n=1 Tax=Arabidopsis
thaliana RepID=Q9M2L0_ARATH
Length = 360
Score = 137 bits (345), Expect = 6e-31
Identities = 73/165 (44%), Positives = 107/165 (64%), Gaps = 4/165 (2%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AAC+YIACR D RT++EI AN A+ +I +I ++L + K + +I +
Sbjct: 202 AACIYIACRDNDMTRTMREISRFANKASISDISETVGFIAEKLEINKNWYM---SIETAN 258
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI----RRSPISIAAAIIYIITQLSDDKKPL 231
F++RFCS ++ +AV+AA EA AE +D RR+P+S+AA I+Y+I +LS +K L
Sbjct: 259 FIKRFCSIFRLDKEAVEAALEA---AESYDYMTNGRRAPVSVAAGIVYVIARLSYEKHLL 315
Query: 230 KDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
K + ATGVAE TI+ +Y DLYP++ I+PTW+A DLKNL +P
Sbjct: 316 KGLIEATGVAENTIKGTYGDLYPNLPTIVPTWFANANDLKNLGAP 360
[29][TOP]
>UniRef100_Q1PEE4 Transcription factor IIB family protein n=2 Tax=Arabidopsis
thaliana RepID=Q1PEE4_ARATH
Length = 362
Score = 136 bits (343), Expect = 1e-30
Identities = 73/167 (43%), Positives = 107/167 (64%), Gaps = 6/167 (3%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AAC+YIACR D RT++EI AN A+ +I +I ++L + K + +I +
Sbjct: 202 AACIYIACRDNDMTRTMREISRFANKASISDISETVGFIAEKLEINKNWYM---SIETAN 258
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI------RRSPISIAAAIIYIITQLSDDKK 237
F++RFCS ++ +AV+AA EA AE +D RR+P+S+AA I+Y+I +LS +K
Sbjct: 259 FIKRFCSIFRLDKEAVEAALEA---AESYDYMTNGCSRRAPVSVAAGIVYVIARLSYEKH 315
Query: 236 PLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
LK + ATGVAE TI+ +Y DLYP++ I+PTW+A DLKNL +P
Sbjct: 316 LLKGLIEATGVAENTIKGTYGDLYPNLPTIVPTWFANANDLKNLGAP 362
[30][TOP]
>UniRef100_UPI00003C0936 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) isoform 1 n=1 Tax=Apis
mellifera RepID=UPI00003C0936
Length = 315
Score = 134 bits (337), Expect = 5e-30
Identities = 75/148 (50%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLILKAL------ETSVDLITTGD 212
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + + +AA +KA E DI RSPIS+AAA IY+ +Q S+DK+ K+
Sbjct: 213 FMSRFCSNLGLPNMVQRAATHIARKAVEIDIVPGRSPISVAAAAIYMASQASEDKRSQKE 272
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SYK +YPH K+ P
Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAGKLFP 300
[31][TOP]
>UniRef100_UPI000186D9D8 transcription initiation factor iib, putative n=1 Tax=Pediculus
humanus corporis RepID=UPI000186D9D8
Length = 313
Score = 132 bits (332), Expect = 2e-29
Identities = 75/148 (50%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+A LYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 158 SAALYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLILKAL------ETSVDLITTGD 210
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + + +AA +KA E DI RSPIS+AAA IY+ +Q SDDK+ K+
Sbjct: 211 FMSRFCSNLGLPNMVQRAATHIARKAVELDIVPGRSPISVAAAAIYMASQASDDKRVQKE 270
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SYK +YPH +K+ P
Sbjct: 271 IGDIAGVADVTIRQSYKLMYPHATKLFP 298
[32][TOP]
>UniRef100_UPI0001758201 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) n=1 Tax=Tribolium castaneum
RepID=UPI0001758201
Length = 313
Score = 132 bits (332), Expect = 2e-29
Identities = 74/148 (50%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +K+EIGR + I+K L + I GD
Sbjct: 158 SACLYIACRQEGVPRTFKEICAVSK-ISKREIGRCFKLILKAL------ETSVDLITTGD 210
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + + +AA +KA E DI RSPIS+AAA IY+ +Q S+DK+ K+
Sbjct: 211 FMSRFCSNLGLPNMVQRAATHIARKAVELDIVPGRSPISVAAAAIYMASQASEDKRSQKE 270
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SYK +YPH K+ P
Sbjct: 271 IGDIAGVADVTIRQSYKLMYPHAVKLFP 298
[33][TOP]
>UniRef100_UPI00015B5246 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) n=1 Tax=Nasonia vitripennis
RepID=UPI00015B5246
Length = 315
Score = 132 bits (331), Expect = 3e-29
Identities = 73/148 (49%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLILKAL------ETSVDLITTGD 212
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + + +AA +KA + DI RSPIS+ AA IY+ +Q SDDKK K+
Sbjct: 213 FMSRFCSNLGLPNMVQRAATHIARKAVDIDIVPGRSPISVTAAAIYMASQASDDKKSQKE 272
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SYK ++PH +++ P
Sbjct: 273 IGDIAGVADVTIRQSYKLMFPHAARLFP 300
[34][TOP]
>UniRef100_C3ZCP1 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3ZCP1_BRAFL
Length = 319
Score = 131 bits (329), Expect = 4e-29
Identities = 75/148 (50%), Positives = 98/148 (66%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQE PRT KEIC+++ +KKEIGR + I+K L SVE+ I GD
Sbjct: 164 AACLYIACRQEGVPRTFKEICAISR-VSKKEIGRVFKLILKALET----SVEL--ITTGD 216
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNLN+ Q +AA +KA E D+ RSPIS+AAA IY+ +Q S++K+ K+
Sbjct: 217 FMSRFCSNLNLPSQVQRAATHIARKAVELDLVPGRSPISVAAAAIYMASQASEEKRTQKE 276
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP ++ P
Sbjct: 277 IGDIAGVADVTIRQSYRLIYPRAHELFP 304
[35][TOP]
>UniRef100_B4NZP8 GE18945 n=1 Tax=Drosophila yakuba RepID=B4NZP8_DROYA
Length = 315
Score = 129 bits (323), Expect = 2e-28
Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L + I D
Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC+NL++ + +AA KKA E DI RSPIS+AAA IY+ +Q S+ K+ KD
Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKD 272
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SYK +YPH +K+ P
Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300
[36][TOP]
>UniRef100_B5DHX4 GA27746 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=B5DHX4_DROPS
Length = 314
Score = 127 bits (319), Expect = 6e-28
Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L + I D
Sbjct: 159 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC+NL++ + +AA KKA E DI RSPIS+AAA IY+ +Q S+ K+ K+
Sbjct: 212 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 271
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SYK +YPH +K+ P
Sbjct: 272 IGDIAGVADVTIRQSYKLMYPHAAKLFP 299
[37][TOP]
>UniRef100_B4KHS4 GI20422 n=2 Tax=Drosophila RepID=B4KHS4_DROMO
Length = 315
Score = 127 bits (319), Expect = 6e-28
Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L + I D
Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC+NL++ + +AA KKA E DI RSPIS+AAA IY+ +Q S+ K+ K+
Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 272
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SYK +YPH +K+ P
Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300
[38][TOP]
>UniRef100_B4JPZ0 GH13607 n=1 Tax=Drosophila grimshawi RepID=B4JPZ0_DROGR
Length = 315
Score = 127 bits (319), Expect = 6e-28
Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L + I D
Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC+NL++ + +AA KKA E DI RSPIS+AAA IY+ +Q S+ K+ K+
Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 272
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SYK +YPH +K+ P
Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300
[39][TOP]
>UniRef100_B4HWP7 GM18405 n=1 Tax=Drosophila sechellia RepID=B4HWP7_DROSE
Length = 315
Score = 127 bits (319), Expect = 6e-28
Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L + I D
Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC+NL++ + +AA KKA E DI RSPIS+AAA IY+ +Q S+ K+ K+
Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 272
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SYK +YPH +K+ P
Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300
[40][TOP]
>UniRef100_Q9NHP7 Transcription initiation factor IIB n=1 Tax=Drosophila virilis
RepID=TF2B_DROVI
Length = 293
Score = 127 bits (319), Expect = 6e-28
Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L + I D
Sbjct: 138 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 190
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC+NL++ + +AA KKA E DI RSPIS+AAA IY+ +Q S+ K+ K+
Sbjct: 191 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 250
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SYK +YPH +K+ P
Sbjct: 251 IGDIAGVADVTIRQSYKLMYPHAAKLFP 278
[41][TOP]
>UniRef100_P29052 Transcription initiation factor IIB n=6 Tax=Sophophora
RepID=TF2B_DROME
Length = 315
Score = 127 bits (319), Expect = 6e-28
Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L + I D
Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC+NL++ + +AA KKA E DI RSPIS+AAA IY+ +Q S+ K+ K+
Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 272
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SYK +YPH +K+ P
Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300
[42][TOP]
>UniRef100_Q7QG89 AGAP009558-PA n=1 Tax=Anopheles gambiae RepID=Q7QG89_ANOGA
Length = 316
Score = 127 bits (318), Expect = 8e-28
Identities = 73/148 (49%), Positives = 98/148 (66%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L SV++ I D
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKALAT----SVDL--ITTAD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC+NL++ + +AA +KA E DI RSPIS+AAA IY+ +Q SD+KK K+
Sbjct: 214 FMSRFCANLDLPNVVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDNKKTHKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YPH +++ P
Sbjct: 274 IGDIAGVADVTIRQSYRLMYPHAAELFP 301
[43][TOP]
>UniRef100_B0WI57 Transcription initiation factor TFIIB n=1 Tax=Culex
quinquefasciatus RepID=B0WI57_CULQU
Length = 316
Score = 127 bits (318), Expect = 8e-28
Identities = 73/148 (49%), Positives = 97/148 (65%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L SV++ I D
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKALAT----SVDL--ITTAD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC+NL++ + +AA +KA E DI RSPIS+AAA IY+ +Q SD KK K+
Sbjct: 214 FMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDQKKTHKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YPH +++ P
Sbjct: 274 IGDIAGVADVTIRQSYRLMYPHAAELFP 301
[44][TOP]
>UniRef100_UPI0000521774 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) (S300-II) n=1 Tax=Ciona
intestinalis RepID=UPI0000521774
Length = 314
Score = 126 bits (317), Expect = 1e-27
Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQE PRT KEIC+++ +KKEIGR+ + IVK L + I +GD
Sbjct: 159 AACLYIACRQEGVPRTFKEICAISR-ISKKEIGRSFKLIVKNL------ETNVEVITSGD 211
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNLN+ + A +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+
Sbjct: 212 FMSRFCSNLNLPPYVQRGATYIARKAVEKDLVAGRSPISVAAAAIYMASQASKEKRSQKE 271
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
IS GVAE TIR SYK ++P + P
Sbjct: 272 ISEIAGVAEVTIRQSYKLMHPRAKDLFP 299
[45][TOP]
>UniRef100_UPI0000E479AC PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E479AC
Length = 321
Score = 125 bits (314), Expect = 2e-27
Identities = 72/163 (44%), Positives = 99/163 (60%), Gaps = 2/163 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQE PRT KEIC+V+ K+EIGR + I+K L + I GD
Sbjct: 166 AACLYIACRQEGVPRTFKEICAVSR-VNKREIGRCFKLILKAL------ETNVVLITTGD 218
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL++ + +AA +KA+E D+ RSPIS+ AA IY+ +Q S++K+ K+
Sbjct: 219 FMSRFCSNLSLPPKVQRAATHIARKADELDLVAGRSPISVTAAAIYMASQASEEKRSQKE 278
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
I GVA+ TIR SYK +YP + P + +++L P
Sbjct: 279 IGEIAGVADVTIRQSYKLIYPKSHDLFPQDFQFATKIEDLPPP 321
[46][TOP]
>UniRef100_UPI00017B0FC9 UPI00017B0FC9 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0FC9
Length = 318
Score = 125 bits (313), Expect = 3e-27
Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 163 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 215
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +KK K+
Sbjct: 216 FMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 275
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP +++ P
Sbjct: 276 IGDIAGVADVTIRQSYRLIYPRAAELFP 303
[47][TOP]
>UniRef100_UPI00016E2A21 UPI00016E2A21 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E2A21
Length = 318
Score = 125 bits (313), Expect = 3e-27
Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 163 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 215
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +KK K+
Sbjct: 216 FMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 275
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP +++ P
Sbjct: 276 IGDIAGVADVTIRQSYRLIYPRAAELFP 303
[48][TOP]
>UniRef100_Q6B512 General transcription factor II B n=1 Tax=Oreochromis mossambicus
RepID=Q6B512_OREMO
Length = 318
Score = 125 bits (313), Expect = 3e-27
Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 163 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 215
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +KK K+
Sbjct: 216 FMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 275
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP +++ P
Sbjct: 276 IGDIAGVADVTIRQSYRLIYPRAAELFP 303
[49][TOP]
>UniRef100_Q4SSL3 Chromosome 15 SCAF14367, whole genome shotgun sequence. (Fragment)
n=1 Tax=Tetraodon nigroviridis RepID=Q4SSL3_TETNG
Length = 344
Score = 125 bits (313), Expect = 3e-27
Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 189 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 241
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +KK K+
Sbjct: 242 FMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 301
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP +++ P
Sbjct: 302 IGDIAGVADVTIRQSYRLIYPRAAELFP 329
[50][TOP]
>UniRef100_Q17AB9 Transcription initiation factor TFIIB n=1 Tax=Aedes aegypti
RepID=Q17AB9_AEDAE
Length = 318
Score = 125 bits (313), Expect = 3e-27
Identities = 72/148 (48%), Positives = 97/148 (65%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L SV++ I D
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKALAT----SVDL--ITTAD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC+NL++ + +AA +KA E DI RSPIS+AAA IY+ +Q SD KK K+
Sbjct: 214 FMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDQKKTHKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ ++PH +++ P
Sbjct: 274 IGDIAGVADVTIRQSYRLMHPHAAELFP 301
[51][TOP]
>UniRef100_Q17AB8 Transcription initiation factor TFIIB n=1 Tax=Aedes aegypti
RepID=Q17AB8_AEDAE
Length = 316
Score = 125 bits (313), Expect = 3e-27
Identities = 72/148 (48%), Positives = 97/148 (65%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L SV++ I D
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKALAT----SVDL--ITTAD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC+NL++ + +AA +KA E DI RSPIS+AAA IY+ +Q SD KK K+
Sbjct: 214 FMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDQKKTHKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ ++PH +++ P
Sbjct: 274 IGDIAGVADVTIRQSYRLMHPHAAELFP 301
[52][TOP]
>UniRef100_A8QEV5 Transcription initiation factor IIB, putative n=1 Tax=Brugia malayi
RepID=A8QEV5_BRUMA
Length = 309
Score = 125 bits (313), Expect = 3e-27
Identities = 71/148 (47%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACR+E PRT KEIC+ A+ +KKEIGR + I+K L + I + D
Sbjct: 154 AACLYIACRKEGVPRTFKEICA-ASRVSKKEIGRCFKLIIKSL------ETSLEQITSAD 206
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC NL + H AA KKA E D+ RSPISIAAA IY+ +Q S +KK K+
Sbjct: 207 FMSRFCGNLGLPHSIQAAATRIAKKAVELDLVAGRSPISIAAAAIYMASQASSNKKTAKE 266
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I G AE T++ +YK LYP ++ P
Sbjct: 267 IGEIAGAAEVTVKQTYKLLYPRAGELFP 294
[53][TOP]
>UniRef100_Q7SX98 General transcription factor IIB n=1 Tax=Danio rerio
RepID=Q7SX98_DANRE
Length = 316
Score = 124 bits (312), Expect = 4e-27
Identities = 72/148 (48%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +KK K+
Sbjct: 214 FMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP + + P
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAADLFP 301
[54][TOP]
>UniRef100_B5XD83 Transcription initiation factor IIB n=1 Tax=Salmo salar
RepID=B5XD83_SALSA
Length = 318
Score = 124 bits (312), Expect = 4e-27
Identities = 72/148 (48%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 163 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 215
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +KK K+
Sbjct: 216 FMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 275
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP + + P
Sbjct: 276 IGDIAGVADVTIRQSYRLIYPRAADLFP 303
[55][TOP]
>UniRef100_A2BIH7 General transcription factor IIB n=1 Tax=Danio rerio
RepID=A2BIH7_DANRE
Length = 316
Score = 124 bits (312), Expect = 4e-27
Identities = 72/148 (48%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +KK K+
Sbjct: 214 FMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP + + P
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAADLFP 301
[56][TOP]
>UniRef100_Q8H7W1 Putative transcription initiation factor IIB n=2 Tax=Oryza sativa
RepID=Q8H7W1_ORYSJ
Length = 308
Score = 124 bits (312), Expect = 4e-27
Identities = 68/142 (47%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGAT-KKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG 402
AACL+IACR E PRT+KE+ SV KKEIGR + I + LG E G ++EMG + A
Sbjct: 160 AACLHIACRNEGNPRTLKELASVMRDCQDKKEIGRMERIIRRHLGEEAGTAMEMGVVRAA 219
Query: 401 DFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPLKD 225
D+M RF S L M V+ AQ A + E+ D+RR+P SIAAAIIY++ Q + + +D
Sbjct: 220 DYMSRFGSRLGMGKPEVREAQRAAQTLEDKLDVRRNPESIAAAIIYMVVQRAGAQTSARD 279
Query: 224 ISIATGVAEGTIRNSYKDLYPH 159
+S A+GVAE TI+ + K+L H
Sbjct: 280 VSKASGVAEATIKEACKELSQH 301
[57][TOP]
>UniRef100_UPI000194CD4A PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata
RepID=UPI000194CD4A
Length = 316
Score = 124 bits (311), Expect = 5e-27
Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+
Sbjct: 214 FMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASSEKRTQKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP + P
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301
[58][TOP]
>UniRef100_Q00403 Transcription initiation factor IIB n=5 Tax=Eutheria
RepID=TF2B_HUMAN
Length = 316
Score = 124 bits (311), Expect = 5e-27
Identities = 72/149 (48%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+
Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
I GVA+ TIR SY+ +YP + PT
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFPT 302
[59][TOP]
>UniRef100_UPI0000D99A17 PREDICTED: general transcription factor IIB n=1 Tax=Macaca mulatta
RepID=UPI0000D99A17
Length = 373
Score = 124 bits (311), Expect = 5e-27
Identities = 72/149 (48%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 218 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 270
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+
Sbjct: 271 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 330
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
I GVA+ TIR SY+ +YP + PT
Sbjct: 331 IGDIAGVADVTIRQSYRLIYPRAPDLFPT 359
[60][TOP]
>UniRef100_Q63ZH4 LOC494830 protein n=1 Tax=Xenopus laevis RepID=Q63ZH4_XENLA
Length = 316
Score = 124 bits (311), Expect = 5e-27
Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETNVDLITTGD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+
Sbjct: 214 FMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP + P
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301
[61][TOP]
>UniRef100_Q28G23 General transcription factor IIBgeneral transcription factor IIB
n=2 Tax=Xenopus (Silurana) tropicalis RepID=Q28G23_XENTR
Length = 316
Score = 124 bits (311), Expect = 5e-27
Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETNVDLITTGD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+
Sbjct: 214 FMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP + P
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301
[62][TOP]
>UniRef100_P29054 Transcription initiation factor IIB n=1 Tax=Xenopus laevis
RepID=TF2B_XENLA
Length = 316
Score = 124 bits (311), Expect = 5e-27
Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETNVDLITTGD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+
Sbjct: 214 FMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP + P
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301
[63][TOP]
>UniRef100_A7SH79 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SH79_NEMVE
Length = 310
Score = 124 bits (310), Expect = 7e-27
Identities = 72/162 (44%), Positives = 99/162 (61%), Gaps = 2/162 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT+KEIC++ +KKEIGR + I+K L + I +GD
Sbjct: 155 SACLYIACRQEGVPRTLKEICAIGK-ISKKEIGRCFKLILKHL------ETSVDLITSGD 207
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + KAA ++A E D+ RSPISIAAA IY+ +Q S++K+ K+
Sbjct: 208 FMSRFCSNLTLPLSVQKAATYIARRAVELDLVAGRSPISIAAAAIYMASQASEEKRSQKE 267
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSS 99
I GVA+ TIR SY+ L+P ++ P + ++ L S
Sbjct: 268 IGDIAGVADVTIRQSYRLLFPKARELFPADFKFAVPIERLPS 309
[64][TOP]
>UniRef100_UPI0000F2BACE PREDICTED: similar to alpha initiation factor n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BACE
Length = 316
Score = 123 bits (309), Expect = 9e-27
Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+
Sbjct: 214 FMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP + P
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301
[65][TOP]
>UniRef100_UPI0000E80A74 PREDICTED: similar to IIB protein n=1 Tax=Gallus gallus
RepID=UPI0000E80A74
Length = 468
Score = 123 bits (309), Expect = 9e-27
Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 313 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 365
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+
Sbjct: 366 FMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 425
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP + P
Sbjct: 426 IGDIAGVADVTIRQSYRLIYPRAPDLFP 453
[66][TOP]
>UniRef100_UPI0000ECB339 Transcription initiation factor IIB (General transcription factor
TFIIB) (S300-II). n=1 Tax=Gallus gallus
RepID=UPI0000ECB339
Length = 306
Score = 123 bits (309), Expect = 9e-27
Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 151 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 203
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+
Sbjct: 204 FMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 263
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP + P
Sbjct: 264 IGDIAGVADVTIRQSYRLIYPRAPDLFP 291
[67][TOP]
>UniRef100_Q3UZJ3 Putative uncharacterized protein n=1 Tax=Mus musculus
RepID=Q3UZJ3_MOUSE
Length = 316
Score = 122 bits (307), Expect = 2e-26
Identities = 71/149 (47%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+
Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
I GVA+ TIR SY+ +YP + P+
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFPS 302
[68][TOP]
>UniRef100_P62915 Transcription initiation factor IIB n=3 Tax=Murinae
RepID=TF2B_MOUSE
Length = 316
Score = 122 bits (307), Expect = 2e-26
Identities = 71/149 (47%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+
Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
I GVA+ TIR SY+ +YP + P+
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFPS 302
[69][TOP]
>UniRef100_Q2KIN8 Transcription initiation factor IIB n=1 Tax=Bos taurus
RepID=TF2B_BOVIN
Length = 316
Score = 122 bits (306), Expect = 2e-26
Identities = 71/149 (47%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+A A IY+ +Q S +K+ K+
Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAEAAIYMASQASAEKRTQKE 273
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
I GVA+ TIR SY+ +YP + PT
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFPT 302
[70][TOP]
>UniRef100_Q7QG90 AGAP009559-PA n=1 Tax=Anopheles gambiae RepID=Q7QG90_ANOGA
Length = 315
Score = 120 bits (302), Expect = 6e-26
Identities = 70/147 (47%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
ACLYIACRQE PRT KE+C+V + A+KKEIGR + I K L + + I + DF
Sbjct: 157 ACLYIACRQEGVPRTFKEMCAVCS-ASKKEIGRCFKLITKVL------ATSLDHITSEDF 209
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDI 222
M+RFCS L + H+ KAA +KA E D+ RSPIS+AAA IY+ +Q+S LK +
Sbjct: 210 MQRFCSKLFLPHEVQKAATHIAQKAFEADLVPDRSPISVAAAAIYMASQVSATAMSLKAV 269
Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIP 141
+ GVAE TI+ SYK ++PH ++ P
Sbjct: 270 AAIAGVAELTIKQSYKLMHPHAWELFP 296
[71][TOP]
>UniRef100_B3RPB4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3RPB4_TRIAD
Length = 340
Score = 119 bits (297), Expect = 2e-25
Identities = 74/162 (45%), Positives = 96/162 (59%), Gaps = 2/162 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+A LYIACRQE PRT KEIC+V+ +KKEIGR + I+K L +VEM I D
Sbjct: 185 SASLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKAILKALET----NVEM--ISTQD 237
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNLN+ + KAA +A E D+ RSP+S+ AA IY+ +Q SD KK K+
Sbjct: 238 FMSRFCSNLNLPNYVQKAASHIAHRAIELDLAPGRSPVSVTAAAIYLASQASDTKKSQKE 297
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSS 99
I GVA+ TIR SY+ L P + P + + + L S
Sbjct: 298 IGDVAGVADVTIRQSYRLLLPRSKDLFPADFVFKTPIDQLPS 339
[72][TOP]
>UniRef100_UPI00017936E7 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) n=1 Tax=Acyrthosiphon pisum
RepID=UPI00017936E7
Length = 310
Score = 118 bits (296), Expect = 3e-25
Identities = 69/148 (46%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+A LYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 155 SASLYIACRQEGVPRTFKEICAVSK-VSKKEIGRVFKLILKAL------ETSVDLITTGD 207
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC NL + + +AA KKA E+DI RSPIS+AAA I++ +Q SD+K+ K+
Sbjct: 208 FMSRFCCNLGLPNMVQRAATHIAKKAVEYDIVPGRSPISVAAAAIFMASQASDEKRSQKE 267
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVAE TI+ SYK + + + + P
Sbjct: 268 IGDIAGVAEVTIKQSYKLILANATLLFP 295
[73][TOP]
>UniRef100_Q3UNY0 Putative uncharacterized protein n=1 Tax=Mus musculus
RepID=Q3UNY0_MOUSE
Length = 316
Score = 118 bits (295), Expect = 4e-25
Identities = 70/148 (47%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 162 ACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGDL 214
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDI 222
M RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+I
Sbjct: 215 MSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEI 274
Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIPT 138
GVA+ TIR SY+ YP + P+
Sbjct: 275 GDIAGVADVTIRQSYRLNYPRAPDLFPS 302
[74][TOP]
>UniRef100_UPI000192557A PREDICTED: similar to general transcription factor IIB n=1
Tax=Hydra magnipapillata RepID=UPI000192557A
Length = 275
Score = 117 bits (292), Expect = 8e-25
Identities = 68/148 (45%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+++ KKEIGR + I+K L + I + D
Sbjct: 120 SACLYIACRQEGVPRTFKEICAISK-IPKKEIGRCFKLILKAL------EASVDIITSED 172
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL++ +AA ++A E D+ RSP+S+AAA IY+ +Q S DKK KD
Sbjct: 173 FMSRFCSNLSLPASVQRAATYIARRAMELDLVPGRSPVSVAAAAIYLASQASLDKKSQKD 232
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ L + + P
Sbjct: 233 IGDIAGVADVTIRQSYRSLVVRAADLFP 260
[75][TOP]
>UniRef100_A8X282 C. briggsae CBR-TTB-1 protein n=1 Tax=Caenorhabditis briggsae AF16
RepID=A8X282_CAEBR
Length = 306
Score = 116 bits (291), Expect = 1e-24
Identities = 65/148 (43%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACR++ PRT KEIC+V+ +KKEIGR + I++ L + I + D
Sbjct: 151 AACLYIACRKDGVPRTFKEICAVSR-VSKKEIGRCFKIIIRNL------ETNLEQITSAD 203
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC NL + + AA K+A + D+ R+PISIAAA IY+ +Q S +K+ K+
Sbjct: 204 FMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRTPISIAAAAIYMASQASGEKRSAKE 263
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I G AE T+R +YK LYP +++ P
Sbjct: 264 IGDVAGAAEITVRQTYKLLYPKAAELFP 291
[76][TOP]
>UniRef100_C4J4Z3 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C4J4Z3_MAIZE
Length = 308
Score = 115 bits (287), Expect = 3e-24
Identities = 61/151 (40%), Positives = 97/151 (64%), Gaps = 5/151 (3%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANG--ATKKEIGRAKEYIVKQLGLEKG-QSVEMGTIH 408
AACLY+ACR PRT KE+ + A +K+IG+ I K+LG E G ++++MG +
Sbjct: 158 AACLYVACRSAGAPRTFKELAAATRDGPAARKDIGKLIALIRKRLGDEAGGEAMDMGVVR 217
Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYI-ITQLSDDKKP 234
A D++ RF S L + V+A QEA ++ ++ D+RR+P S AAAI+++ + + +
Sbjct: 218 AADYVERFGSLLGIGEGEVRAVQEAARRMQDHLDVRRNPDSTAAAIVFMAMERRAGAGSS 277
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIP 141
++D+S ATGVAE TI+ +Y++LYPH + P
Sbjct: 278 IRDVSAATGVAENTIKQAYRELYPHADLLFP 308
[77][TOP]
>UniRef100_O16991 Transcription initiation factor IIB n=1 Tax=Caenorhabditis elegans
RepID=TF2B_CAEEL
Length = 306
Score = 114 bits (286), Expect = 4e-24
Identities = 66/148 (44%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACR++ PRT KEIC+V+ +KKEIGR + IV+ L + I + D
Sbjct: 151 AACLYIACRKDGVPRTFKEICAVSR-VSKKEIGRCFKIIVRSL------ETNLEQITSAD 203
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFC NL++ + AA K A + D+ R+PISIAAA IY+ +Q S +K+ K+
Sbjct: 204 FMSRFCGNLSLPNSIQAAATRIAKCAVDMDLVAGRTPISIAAAAIYMASQASAEKRSAKE 263
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I G AE T+R +YK LYP ++ P
Sbjct: 264 IGDVAGAAEITVRQTYKLLYPKALELFP 291
[78][TOP]
>UniRef100_C5YUY1 Putative uncharacterized protein Sb09g027300 n=1 Tax=Sorghum
bicolor RepID=C5YUY1_SORBI
Length = 286
Score = 113 bits (282), Expect = 1e-23
Identities = 62/151 (41%), Positives = 96/151 (63%), Gaps = 7/151 (4%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANG--ATKKEIGRAKEYIVKQLGLEKGQS---VEMGT 414
AACLY+ACR+ PRT KE+ + A +K+IG+ I K+LG E G +++G
Sbjct: 134 AACLYVACRRAGAPRTFKELAAATRDGPAARKDIGKLIALIRKRLGDEAGGGEAMMDIGV 193
Query: 413 IHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYI-ITQLSDDK 240
+ A D++ RF S L M V+A QEA ++ ++ D+RR+P S AAAIIY+ + + +
Sbjct: 194 VRAADYVARFGSQLGMEAGEVRAVQEAARRMQDQLDVRRNPDSTAAAIIYMAMERRAGAG 253
Query: 239 KPLKDISIATGVAEGTIRNSYKDLYPHVSKI 147
+ ++D+S ATGVAE TI+ +Y++LYPH +
Sbjct: 254 RSIRDVSAATGVAENTIKQAYRELYPHADML 284
[79][TOP]
>UniRef100_B8B6F7 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8B6F7_ORYSI
Length = 341
Score = 110 bits (274), Expect = 1e-22
Identities = 61/156 (39%), Positives = 98/156 (62%), Gaps = 14/156 (8%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVAN--GATKKEIGRAKEYIVKQLGLEK---GQSVEMGT 414
AACL+ ACR E PRT+KE+ + + ATK+++G+ I + LG+E+ Q+ +M
Sbjct: 182 AACLHAACRVEGAPRTLKELIAATSDAAATKRDLGKFINAIKRHLGMEERGQDQAADMKA 241
Query: 413 --------IHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIIT 258
+ AGD++ R+ S + M+ Q AA+ A + + D+RR+P SIAAAI+Y+
Sbjct: 242 SGGGVGVVVRAGDYLHRYGSAVGMSGQEASAARRAAGRLDSLDVRRNPQSIAAAIVYMAA 301
Query: 257 QLSDD-KKPLKDISIATGVAEGTIRNSYKDLYPHVS 153
Q S +K ++++S ATGV+E TI+++YKDL PH +
Sbjct: 302 QGSSGVRKSVREVSAATGVSESTIKDAYKDLCPHAA 337
[80][TOP]
>UniRef100_Q8SRP3 Transcription initiation factor IIB n=1 Tax=Encephalitozoon
cuniculi RepID=TF2B_ENCCU
Length = 312
Score = 108 bits (271), Expect = 2e-22
Identities = 70/161 (43%), Positives = 91/161 (56%), Gaps = 3/161 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AAC+YIACRQE+ PRT KEI SV K+EIGR + I L M T+ +
Sbjct: 157 AACIYIACRQEECPRTFKEI-SVMTAVQKREIGRCFKLISPHLE-------RMATMSTEN 208
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL-SDDKKPLK 228
+ RFCS+LN+N + K A E K A E +SP SIAAA+IY++T L ++KK K
Sbjct: 209 IIARFCSDLNLNIKIQKIATEIAKAAHELGCLAGKSPDSIAAAVIYMVTNLFPEEKKIQK 268
Query: 227 DISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNL 105
DI T V E TI+N+YK+L IIP +E + L
Sbjct: 269 DIQFVTNVTEVTIKNTYKELLTFKYDIIPENMVNKESIDKL 309
[81][TOP]
>UniRef100_UPI000155D43D PREDICTED: similar to general transcription factor IIB, partial n=1
Tax=Ornithorhynchus anatinus RepID=UPI000155D43D
Length = 544
Score = 107 bits (268), Expect = 5e-22
Identities = 64/148 (43%), Positives = 87/148 (58%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y+A + + RT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 389 AAAIYMASQASTEKRTQKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 441
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+
Sbjct: 442 FMSRFCSNLGLPKQVQMAATHIARKAVEIDLVPGRSPISVAAAAIYMASQASTEKRTQKE 501
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I GVA+ TIR SY+ +YP + P
Sbjct: 502 IGDIAGVADVTIRQSYRLIYPRAPDLFP 529
Score = 105 bits (263), Expect = 2e-21
Identities = 62/137 (45%), Positives = 83/137 (60%), Gaps = 2/137 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 295 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 347
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+
Sbjct: 348 FMSRFCSNLGLPKQVQMAATHIARKAVEIDLVPGRSPISVAAAAIYMASQASTEKRTQKE 407
Query: 224 ISIATGVAEGTIRNSYK 174
I + +++ I +K
Sbjct: 408 ICAVSRISKKEIGRCFK 424
[82][TOP]
>UniRef100_Q54FD6 Transcription initiation factor IIB n=1 Tax=Dictyostelium
discoideum RepID=TF2B_DICDI
Length = 325
Score = 106 bits (265), Expect = 1e-21
Identities = 67/153 (43%), Positives = 89/153 (58%), Gaps = 6/153 (3%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSVEMGTI 411
AA LYIACRQE RT KEI ++ N KKEI R KE L L+ TI
Sbjct: 168 AAALYIACRQEHLSRTFKEIAALTN-VPKKEISRCYKIMKETFASVLNLQ--------TI 218
Query: 410 HAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKK 237
+ DF RFCS L + + K A+ K A + I +SPIS+ AA IY+++QLS +K+
Sbjct: 219 SSEDFTSRFCSTLKLPNDVKKGAEHVSKMAMDMGIVAGKSPISVTAASIYMVSQLSPEKR 278
Query: 236 PLKDISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
K I+ +GV+E TIRN+YKDLY ++IP+
Sbjct: 279 TQKQIADVSGVSEVTIRNAYKDLYAKRDQLIPS 311
[83][TOP]
>UniRef100_A3AF21 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=A3AF21_ORYSJ
Length = 309
Score = 105 bits (263), Expect = 2e-21
Identities = 59/129 (45%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Frame = -1
Query: 539 PRTVKEICSVANGAT-KKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLNMN 363
PRT+KE+ SV KKEIGR + I + LG E G ++EMG + A D+M RF S L M
Sbjct: 174 PRTLKELASVMRDCQDKKEIGRMERIIRRHLGEEAGTAMEMGVVRAADYMSRFGSRLGMG 233
Query: 362 HQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPLKDISIATGVAEGTIR 186
V+ AQ A + E+ D+RR+P SIAAAIIY++ Q + + +D+S A+GVAE TI+
Sbjct: 234 KPEVREAQRAAQTLEDKLDVRRNPESIAAAIIYMVVQRAGAQTSARDVSKASGVAEATIK 293
Query: 185 NSYKDLYPH 159
+ K+L H
Sbjct: 294 EACKELSQH 302
[84][TOP]
>UniRef100_B9R918 Transcription initiation factor iib, putative n=1 Tax=Ricinus
communis RepID=B9R918_RICCO
Length = 89
Score = 105 bits (261), Expect = 3e-21
Identities = 51/73 (69%), Positives = 60/73 (82%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLYIACRQE+KPRT KEICSV NGATKKEIGRA+ +I+K L +E G VE GTIHA D
Sbjct: 18 AACLYIACRQENKPRTPKEICSVVNGATKKEIGRAEVFILKHLEVEMGH-VEAGTIHAAD 76
Query: 398 FMRRFCSNLNMNH 360
++RR CSNL + +
Sbjct: 77 YLRRVCSNLGLTN 89
[85][TOP]
>UniRef100_B6JY64 Transcription factor TFIIB n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JY64_SCHJY
Length = 339
Score = 100 bits (249), Expect = 8e-20
Identities = 70/172 (40%), Positives = 97/172 (56%), Gaps = 14/172 (8%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL----------GLEKGQS 429
AAC+YIACRQ PRT EIC++ N A KKEIGR + + + L KGQ
Sbjct: 165 AACIYIACRQGKVPRTFMEICTLTNVA-KKEIGRVYKTLQRMLTEGGALHNSVDAFKGQE 223
Query: 428 -VEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKA--EEFDIRRSPISIAAAIIYIIT 258
++ + A D M RFC+ L + AA E ++A E RSPISIAA+ IY+I+
Sbjct: 224 YIQNSSTSAEDLMVRFCNRLQLPTFVQLAAAELARRAGQEGTLAGRSPISIAASGIYMIS 283
Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEEDLKNL 105
L K K+IS TGV++ TIR +YK L+ +K++ P W AK+ + +L
Sbjct: 284 SLMGYPKTPKEISEVTGVSDSTIRIAYKLLHAERNKLVDPKWVAKDRTMDSL 335
[86][TOP]
>UniRef100_UPI00005A11DE PREDICTED: similar to general transcription factor IIB isoform 2
n=1 Tax=Canis lupus familiaris RepID=UPI00005A11DE
Length = 273
Score = 99.0 bits (245), Expect = 2e-19
Identities = 59/119 (49%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLK 228
FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K
Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQK 272
[87][TOP]
>UniRef100_UPI0000EBC715 PREDICTED: similar to Transcription initiation factor IIB (General
transcription factor TFIIB) (S300-II) n=1 Tax=Bos taurus
RepID=UPI0000EBC715
Length = 149
Score = 98.2 bits (243), Expect = 4e-19
Identities = 59/136 (43%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
Frame = -1
Query: 539 PRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLNMNH 360
P + EIC+V+ +KKEIGR + I+K L + I GDFM RFCSNL +
Sbjct: 7 PSLIPEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGDFMSRFCSNLCLPK 59
Query: 359 QAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDISIATGVAEGTIR 186
Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+I GVA+ TIR
Sbjct: 60 QVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIR 119
Query: 185 NSYKDLYPHVSKIIPT 138
SY+ +YP + PT
Sbjct: 120 QSYRLIYPRAPDLFPT 135
[88][TOP]
>UniRef100_A8IM89 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IM89_CHLRE
Length = 312
Score = 98.2 bits (243), Expect = 4e-19
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 9/170 (5%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICS-VANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG 402
A+CL+ ACRQE +PRT KEI S + N +KKEIGR + + + L+K + G A
Sbjct: 148 ASCLFWACRQEKQPRTFKEIVSCLGNDVSKKEIGRTFKDLQQ---LKKDELHRQGA--AA 202
Query: 401 DFMRRFCSN-LNMNHQAVKAAQEAVKKAEEFDIR-----RSPISIAAAIIYIITQLSDDK 240
D + C+ L M+ + + A++ A+ D R R+P S+A+A++ I L++ +
Sbjct: 203 DALASSCNQTLRMDFKWRRLAEDIATAAKPADRRMPWDGRTPTSVASAVVLIAMALAEAR 262
Query: 239 --KPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
+ L +++ + VAEGTIR YKDL+PH+ +++PT ++E+L+ L +P
Sbjct: 263 FDEALSKVAVVSSVAEGTIRGVYKDLFPHLRELVPTESVRDEELQRLPNP 312
[89][TOP]
>UniRef100_C4QEJ3 Transcription initiation factor iib, putative n=2 Tax=Schistosoma
mansoni RepID=C4QEJ3_SCHMA
Length = 308
Score = 98.2 bits (243), Expect = 4e-19
Identities = 55/147 (37%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
ACLY+ACRQE PRT KE+C+V+ +KKEIG+ + I+K L + ++ DF
Sbjct: 155 ACLYMACRQEGVPRTFKEVCAVSR-VSKKEIGKVFKKILKIL------ETNVQSVTVEDF 207
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDI 222
M RFC NLN+N + A ++A ++ RSP+S+AAA IY+ +K ++I
Sbjct: 208 MSRFCGNLNLNIAVQRVANVVARRALNLNLVAGRSPVSVAAAAIYMAAYALGYRKEKREI 267
Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIP 141
G AE TI +Y+ ++ S++ P
Sbjct: 268 GDVAGCAEATITCTYRAMHSRASELFP 294
[90][TOP]
>UniRef100_Q6E6D9 Transcription initiation factor TFIIB n=1 Tax=Antonospora locustae
RepID=Q6E6D9_ANTLO
Length = 306
Score = 97.1 bits (240), Expect = 9e-19
Identities = 63/150 (42%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AAC+YIACRQE PRT KEI SV +K+IGRA + I LEK +V + D
Sbjct: 151 AACIYIACRQEGCPRTFKEI-SVLTAVPRKDIGRAYKIIYPH--LEKFVAVSV-----KD 202
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQL-SDDKKPLK 228
+ RFCSNL++ H A K A + + DI +S SIAAAI+Y++T + S K K
Sbjct: 203 IVSRFCSNLDLGHDAEKLAVAIAQNVQRLDILTGKSTDSIAAAIVYLVTNVFSQHKSMQK 262
Query: 227 DISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
+ + V + TI+N YK+L H ++IP+
Sbjct: 263 FLQNTSNVTDVTIKNVYKELVLHKEEVIPS 292
[91][TOP]
>UniRef100_B7XLJ0 Transcription initiation factor IIB n=1 Tax=Enterocytozoon bieneusi
H348 RepID=B7XLJ0_ENTBH
Length = 311
Score = 97.1 bits (240), Expect = 9e-19
Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
AC+YIAC+ E PRT KEI SV K+EIG+ + I K++ G + D
Sbjct: 158 ACIYIACKTEGCPRTFKEI-SVITVVPKREIGKCYKLISKEIDTT-------GIMATADI 209
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPL-KD 225
+ RFCS+LN+N + A+ KK ++ RSP SIA+AIIY+ L D L KD
Sbjct: 210 VGRFCSDLNLNAKIQNTARYIAKKVQDIGCLAGRSPDSIASAIIYLTLCLYPDFLFLQKD 269
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I T V + TIRN+YKDL P+ +IIP
Sbjct: 270 IQYVTNVTDVTIRNTYKDLLPYKKEIIP 297
[92][TOP]
>UniRef100_A4S6Z8 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S6Z8_OSTLU
Length = 390
Score = 96.3 bits (238), Expect = 2e-18
Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 11/158 (6%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL-GLEKGQSVEMGTIHAG 402
AACLYIA RQE RT KE+C A G T KEIGR ++I+K GL + +M T
Sbjct: 170 AACLYIAARQEGMTRTFKEVCGAAQGTTVKEIGRCYKFILKVCDGLNMQMNEQMITPEL- 228
Query: 401 DFMRRFCSNLNM-NHQAVKAAQEAV------KKAEEFDIRRSPISIAAAIIYI---ITQL 252
RFC NL M +H +K V + +E + P S+AAA I+I + ++
Sbjct: 229 -LTNRFCGNLGMSDHDFLKLCSHIVRTFRELRDSEGHKSEKQPASVAAAAIFIASVVREM 287
Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
DK L IS +G+AE TIR S+ D+ P+ S+++P+
Sbjct: 288 HKDKASLFRISEVSGMAEVTIRTSFFDMVPYASRLLPS 325
[93][TOP]
>UniRef100_C1MZY4 Transcription initiation factor n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MZY4_9CHLO
Length = 370
Score = 95.5 bits (236), Expect = 3e-18
Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL-GLEKGQSVEMGTIHAG 402
AACLYI+CRQE RT KEIC A T KEIG+ ++IVK + GL +M I
Sbjct: 164 AACLYISCRQEGTNRTFKEICGGAVNTTVKEIGKCYKFIVKTIDGLNTTMMEQM--ITPE 221
Query: 401 DFMRRFCSNLNM-NHQAVKAAQEAV------KKAEEFDIRRSPISIAAAIIYIITQLSDD 243
RFC NL + N + +K A + + +E + P S+AAA I++ Q+ D
Sbjct: 222 KLTNRFCGNLGLANLEFLKLATTVIGTFNNLRLSEGHKSEKQPASVAAAAIWLCVQIMDK 281
Query: 242 KK--PLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAK 126
+ L+ IS +G+AE TI SY D+YP+ ++++P Y +
Sbjct: 282 QHEITLRKISEVSGMAETTITTSYVDMYPYATRMLPRAYVE 322
[94][TOP]
>UniRef100_C4V7B4 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01
RepID=C4V7B4_NOSCE
Length = 333
Score = 95.5 bits (236), Expect = 3e-18
Identities = 63/160 (39%), Positives = 90/160 (56%), Gaps = 3/160 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
AC+YIACR E+ PRT KE+ S+ KKEIG++ + I + + + D
Sbjct: 179 ACIYIACRLENCPRTFKEV-SLITSVQKKEIGKSFKLISPHVE-------NLTVVSTKDI 230
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL-SDDKKPLKD 225
+ RFCS+L +N + + A K +E I +SP SIAAAIIY++T L + +K KD
Sbjct: 231 VARFCSDLRLNIKIQRLAFAISAKVQEAGILAGKSPDSIAAAIIYMVTYLVPEGRKVQKD 290
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNL 105
I T V E TI+N+YK+L + IIPT +E + NL
Sbjct: 291 IQYVTNVTEVTIKNTYKELAIFKNVIIPTDIVSQEAIDNL 330
[95][TOP]
>UniRef100_B7XLT0 Transcription initiation factor IIB n=1 Tax=Enterocytozoon bieneusi
H348 RepID=B7XLT0_ENTBH
Length = 213
Score = 95.5 bits (236), Expect = 3e-18
Identities = 62/148 (41%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
AC+YIAC+ E PRT KEI SV K+EIG+ + I K++ + + D
Sbjct: 60 ACIYIACKTEGCPRTFKEI-SVITVVPKREIGKCYKLISKEIDTTR-------IMATADI 111
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPL-KD 225
+ RFCS+LN+N + A+ KK ++ RSP SIA+AIIY+ L D L KD
Sbjct: 112 VGRFCSDLNLNAKIQNTARYIAKKVQDIGCLAGRSPDSIASAIIYLTLCLYPDFLFLQKD 171
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I T V + TIRN+YKDL P+ +IIP
Sbjct: 172 IQYVTNVTDVTIRNTYKDLLPYKKEIIP 199
[96][TOP]
>UniRef100_C1EIY3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EIY3_9CHLO
Length = 364
Score = 95.1 bits (235), Expect = 3e-18
Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 11/172 (6%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LYIACRQE RT KEIC A T KEIGR +YIVK + Q +E I
Sbjct: 164 AASLYIACRQEGTNRTFKEICGGAPNTTVKEIGRCYKYIVKAIDGLNTQMMEQ-MITPEK 222
Query: 398 FMRRFCSNLNMNH-------QAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQL---- 252
RFC NL + + AV A +++ E + P S+AAA I++ Q+
Sbjct: 223 LTNRFCGNLGLANLEFLKLATAVIATFRSLRITEGHTSEKQPASVAAAAIWLCVQIWRGE 282
Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
+ + +K IS +G+AE TI SY D+YP+ +K++P Y E + L +P
Sbjct: 283 AAEGIDVKRISEISGMAEATILTSYADMYPYAAKMLPEAYV--ERIPELEAP 332
[97][TOP]
>UniRef100_Q00VJ4 Transcription initiation factor IIB [Oryza sativa (ISS) n=1
Tax=Ostreococcus tauri RepID=Q00VJ4_OSTTA
Length = 395
Score = 94.4 bits (233), Expect = 6e-18
Identities = 62/158 (39%), Positives = 86/158 (54%), Gaps = 11/158 (6%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL-GLEKGQSVEMGTIHAG 402
AACLYIA RQE RT KE+C A G T KEIGR ++I+K GL + +M T
Sbjct: 173 AACLYIAARQEGMTRTFKEVCGAAQGTTVKEIGRCYKFILKVCDGLNMQMNEQMITPEL- 231
Query: 401 DFMRRFCSNLNM-NHQAVKAAQEAVKKAEEF------DIRRSPISIAAAIIYI---ITQL 252
RFC NL + H+ +K V+ +E + P S+AAA I+I + +
Sbjct: 232 -LTNRFCGNLGIGEHEYLKLCSHIVRTFKELRDSEGHRSEKQPASVAAASIFISAVVKGI 290
Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
DK L IS +G+AE TIR S+ D+ P+ SK++P+
Sbjct: 291 HKDKASLFRISEVSGMAEVTIRTSFFDMVPYASKLLPS 328
[98][TOP]
>UniRef100_O13749 Transcription initiation factor IIB n=1 Tax=Schizosaccharomyces
pombe RepID=TF2B_SCHPO
Length = 340
Score = 94.4 bits (233), Expect = 6e-18
Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 14/166 (8%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL-----------GLEKGQ 432
AAC+YIACRQ PRT EIC++ N KKEIGR + + + L L+ +
Sbjct: 165 AACIYIACRQGKVPRTFMEICTLTN-VPKKEIGRVYKTLQRMLTEGGALHNSVDALKGHE 223
Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKA--EEFDIRRSPISIAAAIIYIIT 258
++ + A D M RFC+ L + AA E ++A + RSPISIAA+ IY+I+
Sbjct: 224 YIQSSSTSAEDLMVRFCNRLMLPMSVQSAAAELARRAGLQGTLAGRSPISIAASGIYMIS 283
Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKE 123
L K K+IS TGV++ TIR +YK L+ ++I P W A +
Sbjct: 284 ALMGYPKTPKEISEVTGVSDSTIRIAYKLLHAERKELIDPKWIANK 329
[99][TOP]
>UniRef100_A2STL9 Transcription initiation factor IIB (TFIIB) n=1
Tax=Methanocorpusculum labreanum Z RepID=A2STL9_METLZ
Length = 340
Score = 94.0 bits (232), Expect = 8e-18
Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACRQ + PRT+ EI V+ ++KEIGR +I ++LGL+ + GD
Sbjct: 199 AAALYAACRQCNVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLK------LLPTSPGD 251
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS L + + A E +K+A E ++ R P +AAA IYI + LS +++ ++
Sbjct: 252 YVPRFCSGLGLKGEVQSRAMEILKQAGERELTSGRGPTGVAAAAIYISSILSGERRTQRE 311
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 312 VADVAGVTEVTIRNRYKEL 330
[100][TOP]
>UniRef100_C8S6Q6 Transcription factor TFIIB cyclin-related protein n=1
Tax=Ferroglobus placidus DSM 10642 RepID=C8S6Q6_FERPL
Length = 328
Score = 94.0 bits (232), Expect = 8e-18
Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACRQ PRT+ EI + + +KEIGR +I ++LGL+ + D
Sbjct: 187 AAALYAACRQAGVPRTLDEIATYSR-VDRKEIGRTYRFIARELGLK------LLPTSPAD 239
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFC+ L ++ + K A E +KKAEE ++ R P +AAA IYI + L+ +++ ++
Sbjct: 240 YVPRFCAALGLSGEVQKKAIEIIKKAEEKELTSGRGPTGVAAAAIYIASILTGERRTQRE 299
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 300 VAEVAGVTEVTIRNRYKEL 318
[101][TOP]
>UniRef100_A2YLM6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2YLM6_ORYSI
Length = 354
Score = 92.8 bits (229), Expect = 2e-17
Identities = 60/167 (35%), Positives = 91/167 (54%), Gaps = 27/167 (16%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVAN--GATKKEIGRAKEYIVKQLGLEKGQSVEMG---- 417
AACL+ ACR E PRT+KE+ + ATK+++G+ I + LG + E G
Sbjct: 183 AACLHTACRMEGAPRTLKELIAATPDAAATKRDLGKFIHAIKRLLG-SNDEEAEAGQDQA 241
Query: 416 ----------------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPIS 288
+ A +++ R+ S + M+ Q V AAQ A + +E D+RR+P S
Sbjct: 242 GSKATNGCGGGGGAGAVVRASNYLLRYGSAVGMSGQEVSAAQRAASRLDESLDVRRNPQS 301
Query: 287 IAAAIIYIITQLSDD----KKPLKDISIATGVAEGTIRNSYKDLYPH 159
IAAAIIY+ Q + K ++++S ATGV+E TI+++YKDL H
Sbjct: 302 IAAAIIYMAVQRAGGGGGRSKSVREVSAATGVSESTIKDAYKDLCQH 348
[102][TOP]
>UniRef100_Q6Z470 Putative Transcription initiation factor IIB n=1 Tax=Oryza sativa
Japonica Group RepID=Q6Z470_ORYSJ
Length = 354
Score = 92.0 bits (227), Expect = 3e-17
Identities = 60/167 (35%), Positives = 90/167 (53%), Gaps = 27/167 (16%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVAN--GATKKEIGRAKEYIVKQLGLEKGQSVEMG---- 417
AACL+ ACR E PRT+KE+ + ATK+ +G+ I + LG + E G
Sbjct: 183 AACLHTACRMEGAPRTLKELIAATPDAAATKRNLGKFIHAIKRLLG-SNDEEAEAGQDQA 241
Query: 416 ----------------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPIS 288
+ A +++ R+ S + M+ Q V AAQ A + +E D+RR+P S
Sbjct: 242 GSKATNGCGGGGGAGAVVRASNYLLRYGSAVGMSGQEVSAAQRAASRLDESLDVRRNPQS 301
Query: 287 IAAAIIYIITQLSDD----KKPLKDISIATGVAEGTIRNSYKDLYPH 159
IAAAIIY+ Q + K ++++S ATGV+E TI+++YKDL H
Sbjct: 302 IAAAIIYMAVQRAGGGGGRSKSVREVSAATGVSESTIKDAYKDLCQH 348
[103][TOP]
>UniRef100_O28970 Transcription initiation factor IIB n=1 Tax=Archaeoglobus fulgidus
RepID=TF2B_ARCFU
Length = 326
Score = 92.0 bits (227), Expect = 3e-17
Identities = 55/139 (39%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACRQ PRT+ EI + + +KEIGR +I ++LGL+ M T A D
Sbjct: 185 AAALYAACRQAGVPRTLDEIATYSR-VDRKEIGRTYRFITRELGLKL-----MPTSPA-D 237
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFC+ L ++ + K A E +KKAEE ++ R P +AAA +Y+ + L +++ ++
Sbjct: 238 YIPRFCAALGLSGEVQKKAIEIIKKAEERELTSGRGPTGVAAAALYVASILLGERRTQRE 297
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 298 VAEVAGVTEVTIRNRYKEL 316
[104][TOP]
>UniRef100_Q6CD97 YALI0C02563p n=1 Tax=Yarrowia lipolytica RepID=Q6CD97_YARLI
Length = 324
Score = 90.9 bits (224), Expect = 6e-17
Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
A ++IACR + RT +EI ++ N +KKEI R E + + L Q+ + G
Sbjct: 161 ATVIFIACRHANVQRTFQEIGALTN-VSKKEIRRTLELMKRLLEGTNIQAFRSTQTNPGA 219
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
M R+CS+L +N Q A++ VK+A+E RSPIS+AAA IY+ L + +
Sbjct: 220 LMPRYCSHLGLNSQVANLAEDIVKRAKEIGTLDGRSPISVAAAAIYMAAALYGNDMSAQR 279
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKII 144
+S TGV++GTI+ SYK LY K++
Sbjct: 280 VSEKTGVSDGTIKTSYKHLYEAREKLV 306
[105][TOP]
>UniRef100_A7E760 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
1980 UF-70 RepID=A7E760_SCLS1
Length = 350
Score = 90.1 bits (222), Expect = 1e-16
Identities = 61/170 (35%), Positives = 90/170 (52%), Gaps = 20/170 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSVEMG-- 417
A C++IACRQ D PRT +EI ++ +KK+IGR +++ +K ++ +G
Sbjct: 170 AGCIFIACRQCDVPRTFREIYALTK-VSKKDIGRTFKALEKFFASDSSAKKARAEAVGAP 228
Query: 416 ----------TIHAGDFMRRFCSNLNM-NHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
+ +A D R+CS L + + Q VK +Q +K RSP+S+AAA
Sbjct: 229 ASTESYQTTTSTNAKDLCTRYCSQLGLKSQQFVKVSQGLAEKVSTVGDLAGRSPLSVAAA 288
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYA 129
IY+ + L K KDIS GV++GTIR +YK LY K+I P W A
Sbjct: 289 CIYMASALLGKPKSAKDISQVAGVSDGTIRTAYKYLYADREKLIEPEWIA 338
[106][TOP]
>UniRef100_A3CSQ6 Transcription initiation factor IIB n=1 Tax=Methanoculleus
marisnigri JR1 RepID=TF2B_METMJ
Length = 337
Score = 89.4 bits (220), Expect = 2e-16
Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++LGL+ + + D
Sbjct: 196 AAALYAACRQCSVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLLPTSPI------D 248
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS LN+ + A E +++A E ++ R P +AAA IYI + L +++ ++
Sbjct: 249 YVPRFCSGLNLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQRE 308
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 309 VAEVAGVTEVTIRNRYKEL 327
[107][TOP]
>UniRef100_Q0W302 Transcription initiation factor IIB n=1 Tax=uncultured methanogenic
archaeon RC-I RepID=Q0W302_UNCMA
Length = 337
Score = 89.0 bits (219), Expect = 2e-16
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++LGL+ + + D
Sbjct: 196 AAALYAACRQNGVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLMPTSPI------D 248
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS L++ + A E +++A E ++ R P +AAA IYI + L +++ ++
Sbjct: 249 YVPRFCSGLSLKGEVQSKAVEILRQAAEKELTSGRGPTGVAAAAIYISSILCGERRTQRE 308
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 309 VANVAGVTEVTIRNRYKEL 327
[108][TOP]
>UniRef100_B8GJQ9 Transcription initiation factor IIB n=1 Tax=Methanosphaerula
palustris E1-9c RepID=TF2B_METPE
Length = 334
Score = 87.4 bits (215), Expect = 7e-16
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++LGL+ + + D
Sbjct: 193 AAALYAACRQCSVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLLPTSPI------D 245
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS L + + A E +++A E ++ R P +AAA IYI + L +++ ++
Sbjct: 246 YVPRFCSGLTLKGEVQSRAVEILRQAAERELTSGRGPTGVAAAAIYISSILGGERRTQRE 305
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 306 VAEVAGVTEVTIRNRYKEL 324
[109][TOP]
>UniRef100_Q2FU09 Transcription initiation factor IIB (TFIIB) n=1
Tax=Methanospirillum hungatei JF-1 RepID=Q2FU09_METHJ
Length = 337
Score = 87.0 bits (214), Expect = 9e-16
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++LGL+ + + D
Sbjct: 196 AAALYAACRQCSVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLLPTSPI------D 248
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS L + + A E +++A E ++ R P +AAA IYI + L +++ ++
Sbjct: 249 YVPRFCSGLQLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQRE 308
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 309 VAEVAGVTEVTIRNRYKEL 327
[110][TOP]
>UniRef100_A0B5T8 Transcription initiation factor IIB n=1 Tax=Methanosaeta
thermophila PT RepID=TF2B_METTP
Length = 337
Score = 87.0 bits (214), Expect = 9e-16
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACRQ + PRT+ EI V+ ++KEIGR ++ ++L L+ + + D
Sbjct: 196 AAALYAACRQCNVPRTLDEIAEVSR-VSRKEIGRTYRFVSRELSLKLMPTSPI------D 248
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS LN+ E +++A E ++ R P +AAA IYI + L +D++ ++
Sbjct: 249 YIPRFCSGLNLKGDVQAKGIEILRQAAEKELTSGRGPTGVAAAAIYIASILCNDRRTQRE 308
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 309 VADVAGVTEVTIRNRYKEL 327
[111][TOP]
>UniRef100_A7IAR4 Transcription initiation factor IIB n=1 Tax=Candidatus
Methanoregula boonei 6A8 RepID=TF2B_METB6
Length = 334
Score = 87.0 bits (214), Expect = 9e-16
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++LGL+ + + D
Sbjct: 193 AAALYAACRQCSVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLLPTSPI------D 245
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS L + + A E +++A E ++ R P +AAA IYI + L +++ ++
Sbjct: 246 YVPRFCSGLTLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQRE 305
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 306 VAEVAGVTEVTIRNRYKEL 324
[112][TOP]
>UniRef100_B5I9V2 TFIIB zinc-binding family n=1 Tax=Aciduliprofundum boonei T469
RepID=B5I9V2_9EURY
Length = 313
Score = 86.7 bits (213), Expect = 1e-15
Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y ACR+ PRT+ E+ A+ KK+IGRA ++ K+L L + A
Sbjct: 172 AASIYAACRKVGMPRTLDEVAK-ASELNKKKIGRAYRHLTKELNLNLKPTT------ATS 224
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ +FCS L+++ V A+E V++A E I + P +AAA IYI + ++ + K+
Sbjct: 225 YITQFCSKLHLDKNVVNKAEEIVQQATERGITSGKGPTGVAAAAIYIAANMMNEPRTQKE 284
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I+ GV E TIRN YK++ ++ IP
Sbjct: 285 IAEVAGVTEVTIRNRYKEISSALNVEIP 312
[113][TOP]
>UniRef100_A5UKA1 Transcription initiation factor IIB n=2 Tax=Methanobrevibacter
smithii RepID=TF2B_METS3
Length = 310
Score = 86.3 bits (212), Expect = 2e-15
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACR+ + PRT+ EI V+ TKKE+GR ++ ++L ++++ D
Sbjct: 169 AASLYAACRRCNVPRTLDEIAEVSR-VTKKEVGRTYRFLTREL------NIKLPPTSPVD 221
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L ++ +A A E ++KA E + R P +AAA +YI + L ++K +D
Sbjct: 222 YVPRFASELGLSGEAQSRAIEIIEKAMEKGLTSGRGPTGVAAAALYIASVLLGERKTQRD 281
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 282 VADIAGVTEVTIRNRYKEL 300
[114][TOP]
>UniRef100_Q46CN8 Transcription initiation factor IIB (TFIIB) n=1 Tax=Methanosarcina
barkeri str. Fusaro RepID=Q46CN8_METBF
Length = 337
Score = 85.5 bits (210), Expect = 3e-15
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++L L+ + + D
Sbjct: 196 AAALYAACRQCSVPRTLDEIEEVSR-VSRKEIGRTYRFISRELALKLMPTSPI------D 248
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS LN+ + + E +++A E ++ R P +AAA IYI + L +++ ++
Sbjct: 249 YVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQRE 308
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 309 VADVAGVTEVTIRNRYKEL 327
[115][TOP]
>UniRef100_Q12XC2 Transcription initiation factor IIB n=1 Tax=Methanococcoides
burtonii DSM 6242 RepID=Q12XC2_METBU
Length = 337
Score = 85.5 bits (210), Expect = 3e-15
Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++L L+ + + D
Sbjct: 196 AAALYAACRQCSVPRTLDEIGEVSR-VSRKEIGRTYRFISRELSLKLMPTSPI------D 248
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS LN+ + E +++A E ++ R P +AAA IYI + L +++ ++
Sbjct: 249 YVPRFCSGLNLKGEVQSRGVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQRE 308
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 309 VADVAGVTEVTIRNRYKEL 327
[116][TOP]
>UniRef100_Q977U3 Transcription initiation factor IIB n=1 Tax=Methanosarcina mazei
RepID=TF2B_METMA
Length = 337
Score = 85.5 bits (210), Expect = 3e-15
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++L L+ + + D
Sbjct: 196 AAALYAACRQCSVPRTLDEIEEVSR-VSRKEIGRTYRFISRELALKLMPTSPI------D 248
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS LN+ + + E +++A E ++ R P +AAA IYI + L +++ ++
Sbjct: 249 YVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQRE 308
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 309 VADVAGVTEVTIRNRYKEL 327
[117][TOP]
>UniRef100_Q8TT29 Transcription initiation factor IIB n=1 Tax=Methanosarcina
acetivorans RepID=TF2B_METAC
Length = 337
Score = 85.5 bits (210), Expect = 3e-15
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++L L+ + + D
Sbjct: 196 AAALYAACRQCSVPRTLDEIEEVSR-VSRKEIGRTYRFISRELALKLMPTSPI------D 248
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS LN+ + + E +++A E ++ R P +AAA IYI + L +++ ++
Sbjct: 249 YVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQRE 308
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 309 VADVAGVTEVTIRNRYKEL 327
[118][TOP]
>UniRef100_Q4P519 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4P519_USTMA
Length = 375
Score = 84.3 bits (207), Expect = 6e-15
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 20/164 (12%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE-------------- 441
AA +Y+AC+ PRT EICS+ + +KK IG+ + + + GL
Sbjct: 194 AAAIYVACKMNHVPRTFPEICSLTS-VSKKHIGQCFKEMQQAFGLNATGTGSVDGSRASA 252
Query: 440 --KGQS--VEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAA 279
G S + +G A D + R+C++L + + ++ ++ + E I RSPI+IAA
Sbjct: 253 NNSGTSTPIGIGPTGAADLVGRYCNHLGLEMRITRSTEDITARVRELGILAGRSPITIAA 312
Query: 278 AIIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKI 147
A IY T L K K IS A GV++ TI+NS+K+L H KI
Sbjct: 313 ACIYFSTLLWGVDKGAKRISQAAGVSDVTIKNSFKELLKHKDKI 356
[119][TOP]
>UniRef100_A6SQ01 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6SQ01_BOTFB
Length = 348
Score = 84.3 bits (207), Expect = 6e-15
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 20/170 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSVEMGTI 411
A C++IACRQ PRT +EI ++ +KK+IGR +++ +K + G +
Sbjct: 169 AGCIFIACRQCGVPRTFREIYALTK-VSKKDIGRTFKALEKFFASDSSAKKATADATGAL 227
Query: 410 ------------HAGDFMRRFCSNLNM-NHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
+A D R+CS L + + Q VK +Q +K RSP+S+AAA
Sbjct: 228 AAPDGYQTTTSTNAKDLCTRYCSQLGLKSQQFVKISQGLAEKVSTVGDLAGRSPLSVAAA 287
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYA 129
IY+ + L K K+IS GV++GTIR +YK LY K+I P W A
Sbjct: 288 CIYMASALLGKPKSAKEISQVAGVSDGTIRTAYKYLYADREKLIEPEWIA 337
[120][TOP]
>UniRef100_C4YA24 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4YA24_CLAL4
Length = 349
Score = 84.0 bits (206), Expect = 8e-15
Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 14/162 (8%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ----------- 432
AA ++I CR+ RT KEI ++ N KKEIG+ + I+K++ EK +
Sbjct: 173 AAAIFIGCRKAKVARTFKEIWALTN-VPKKEIGKVFK-IIKRVIQEKNETNPGAYSLIKD 230
Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258
S + A D +RRFCS+L ++++ AA+ ++ +E I RSPI+IAA +IY+ +
Sbjct: 231 SEQTTQTSAEDLIRRFCSHLGLSNEVTNAAEYIARRCKESGILAGRSPITIAATVIYMTS 290
Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
L + I+ TGV++GTI+ S K +Y K+I P+W
Sbjct: 291 LLFGAEVTPSKIANKTGVSDGTIKTSLKVMYEDREKLIDPSW 332
[121][TOP]
>UniRef100_B9W7D6 Transcription initiation factor IIB, putative (General
transcription factor tfiib, putative) (Transcription
factor e, putative) n=1 Tax=Candida dubliniensis CD36
RepID=B9W7D6_CANDC
Length = 344
Score = 84.0 bits (206), Expect = 8e-15
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 14/162 (8%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432
AA ++I CR+ + R+ KEI ++ N +KEIG+ + I+ ++ EK
Sbjct: 171 AASIFIGCRKANVARSFKEIWALTN-VPRKEIGKVFK-IMDKIIREKNAANPNAAYYGQD 228
Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258
S++ A D +RRFCS+L +N Q A+ ++ +E + RSP +IAA +IY+ +
Sbjct: 229 SIQTTQTSAEDLIRRFCSHLGVNTQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAS 288
Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
+ P IS TGV++GTI+ SYK +Y K+I P+W
Sbjct: 289 LVFGFDLPPSKISDKTGVSDGTIKTSYKYMYEEKEKLIDPSW 330
[122][TOP]
>UniRef100_A5DW20 Transcription initiation factor IIB n=1 Tax=Lodderomyces
elongisporus RepID=A5DW20_LODEL
Length = 349
Score = 84.0 bits (206), Expect = 8e-15
Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIG---RAKEYIVKQLGLEKGQS------- 429
AA ++I CR+ R KEI ++ N KKEIG R + I+++ Q+
Sbjct: 175 AASIFIGCRKAKVARLFKEIWALTN-VPKKEIGKVFRIMDRIIQENHAANPQTAAYYSHE 233
Query: 428 -VEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258
++ A D +RRFCS+L +N Q AA+ ++A+E + RSP +IAA +IY+
Sbjct: 234 NIQTTQTSAEDLIRRFCSHLGLNTQVTNAAEHIARRAKEVGVLAGRSPTTIAATVIYMAC 293
Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLK 111
+ P IS TGV++GTI+ S+K LY K+I ++ + +K
Sbjct: 294 MVFGIDMPPSKISDKTGVSDGTIKTSHKYLYEARDKLIDPYWVESGKVK 342
[123][TOP]
>UniRef100_Q9HHK5 Transcription initiation factor IIB 3 n=2 Tax=Halobacterium
salinarum RepID=TF2B3_HALSA
Length = 317
Score = 84.0 bits (206), Expect = 8e-15
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
ACLY ACRQE PRT++E+ VA +KEIGR Y+ ++L S+E+ ++
Sbjct: 179 ACLYAACRQEGIPRTLEEVTEVAR-IDQKEIGRTYRYVAQEL------SLEIQPTDPKEY 231
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RF S+L ++ + + A+E + + E + +SP AAA IY + L ++KK +++
Sbjct: 232 LPRFASDLELSEEVIAKAREIIDTSAEQGLLSGKSPSGFAAAAIYAASLLCNEKKTQREV 291
Query: 221 SIATGVAEGTIRNSYKD 171
+ V E TIRN Y++
Sbjct: 292 ANVANVTEVTIRNRYQE 308
[124][TOP]
>UniRef100_B2WF38 Transcription initiation factor IIB n=1 Tax=Pyrenophora
tritici-repentis Pt-1C-BFP RepID=B2WF38_PYRTR
Length = 338
Score = 83.6 bits (205), Expect = 1e-14
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 25/179 (13%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQS---------- 429
A C++IACR+ D+ R+ +EI + N +KKE+GR + V + ++K Q+
Sbjct: 156 AGCIFIACRKHDQQRSFREIFKMTN-VSKKEVGRT--FKVLEAFIQKSQNNGGPSIAGNG 212
Query: 428 VEMGTIH------------AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPI 291
+ T++ A M R C+ L + Q A+E + + + RSP+
Sbjct: 213 AVIDTVNLLNQKGGTTATSASSLMPRACAKLALGTQVQMVAEECADQVAHYGVAAGRSPL 272
Query: 290 SIAAAIIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEED 117
SIA A +Y+++ L K K+I +A V++GTIR +YK ++ KII P W AK D
Sbjct: 273 SIAGACLYLVSHLMGQPKSPKEIGLAVEVSDGTIRTAYKLMHMEQDKIIKPEWIAKGGD 331
[125][TOP]
>UniRef100_Q75AB1 ADR007Cp n=1 Tax=Eremothecium gossypii RepID=Q75AB1_ASHGO
Length = 354
Score = 83.2 bits (204), Expect = 1e-14
Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 11/156 (7%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQS---------V 426
A+ + + CR+ + RT KEI S+ N KKEIG+ I+K++ EK S +
Sbjct: 177 ASVILVGCRRAEVGRTFKEILSLTN-VRKKEIGKTFN-IIKKILREKNDSGFANVDTANI 234
Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL 252
G +A F+ RFCS+L ++ Q AA+ K A++ ++ RSP++IAA+ IY+ L
Sbjct: 235 STGQTNAETFIPRFCSHLGLSVQVANAAEYIAKHAKDINVLAGRSPLTIAASAIYMANLL 294
Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144
IS V EGT++ YK LY H K++
Sbjct: 295 FRYNITPSQISATLQVTEGTVKGGYKILYEHKEKVV 330
[126][TOP]
>UniRef100_C5MER5 Transcription initiation factor IIB n=1 Tax=Candida tropicalis
MYA-3404 RepID=C5MER5_CANTT
Length = 344
Score = 82.8 bits (203), Expect = 2e-14
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432
AA ++I CR+ + R+ KEI ++ N +KEIG+ + I+ ++ EK
Sbjct: 171 AASIFIGCRKANVARSFKEIWALTN-VPRKEIGKVFK-IMDKIIREKNAANPNAAYYTQD 228
Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258
S+ A D +RRFCS+L +N Q A+ ++ +E + RSP +IAA +IY+ +
Sbjct: 229 SISTTQTSAEDLIRRFCSHLGVNAQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAS 288
Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLK 111
+ P IS TGV++GTI+ SYK +Y K+I ++ + +K
Sbjct: 289 LVFGIDLPPSKISDKTGVSDGTIKTSYKYMYEEKEKLIDPYWVESGKVK 337
[127][TOP]
>UniRef100_Q6KZC9 Transcription initiation factor IIB n=1 Tax=Picrophilus torridus
RepID=Q6KZC9_PICTO
Length = 310
Score = 82.8 bits (203), Expect = 2e-14
Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
A +Y ACR + PRT+ EI SV KKEIGR + + L L S D
Sbjct: 169 AGSIYAACRITNVPRTLDEIASVTR-VKKKEIGRTYRIMARYLKLNIMPS------KPED 221
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS L ++ +A K A+E +K A + D+ + P +AAA IYI + ++ +++ +
Sbjct: 222 YVNRFCSKLRLSMEARKRAEEILKMAVDNDLTSGKGPTGVAAAAIYIASLITGERRTQRA 281
Query: 224 ISIATGVAEGTIRNSYKDL 168
I+ GV E TIRN YK+L
Sbjct: 282 IAEVAGVTEVTIRNRYKEL 300
[128][TOP]
>UniRef100_UPI000038E008 transcription initiation factor IIB n=1 Tax=Ferroplasma acidarmanus
fer1 RepID=UPI000038E008
Length = 311
Score = 82.4 bits (202), Expect = 2e-14
Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
A +Y ACR + PRT+ EI SV KKEIGR + + L L S D
Sbjct: 170 AGSIYAACRITNVPRTLDEIASVTR-VKKKEIGRTYRIMARYLKLNILPS------KPDD 222
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS L ++ +A K A+E +K A + D+ + P +AAA IYI + ++ +++ +
Sbjct: 223 YVNRFCSKLRLSMEARKRAEEILKMAIDNDLTSGKGPTGVAAAAIYIASLITGERRTQRA 282
Query: 224 ISIATGVAEGTIRNSYKDL 168
I+ GV E TIRN YK+L
Sbjct: 283 IAEVAGVTEVTIRNRYKEL 301
[129][TOP]
>UniRef100_Q7S978 Putative uncharacterized protein n=1 Tax=Neurospora crassa
RepID=Q7S978_NEUCR
Length = 348
Score = 82.4 bits (202), Expect = 2e-14
Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 18/163 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA---KEYIVKQLGLEKG--------- 435
A C++IACRQ PRT +EI S+ +KKEIGR E ++++G E+
Sbjct: 170 AGCIFIACRQTGVPRTFREIYSLTK-VSKKEIGRVFKQLESFLQKIGGEEHAITTSIPTF 228
Query: 434 --QSVEMGTIHAGDFMRRFCSNLNM-NHQAVK--AAQEAVKKAEEFDIR-RSPISIAAAI 273
Q G+ A + R+CSNLN N AV+ A Q A K + ++ RSP+S+AAA
Sbjct: 229 NQQYQGKGSTTATELCARYCSNLNFRNSVAVEDVARQLADKTSTISELAGRSPLSVAAAC 288
Query: 272 IYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144
IY+ + + ++ + K+I+ GV++GT++ +Y+ LY K++
Sbjct: 289 IYMASHIRNESRTSKEIATVAGVSDGTVKTAYRLLYNKKDKLL 331
[130][TOP]
>UniRef100_Q5AHZ3 Likely transcription factor TFIIB n=1 Tax=Candida albicans
RepID=Q5AHZ3_CANAL
Length = 344
Score = 82.4 bits (202), Expect = 2e-14
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 14/162 (8%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432
AA ++I CR+ + R+ KEI ++ N +KEIG+ + I+ ++ EK
Sbjct: 171 AASIFIGCRKANVARSFKEIWALTN-VPRKEIGKVFK-IMDKIIREKNAANPNAAYYGQD 228
Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258
S++ A D +RRFCS+L +N Q A+ ++ +E + RSP +IAA +IY+ +
Sbjct: 229 SIQTTQTSAEDLIRRFCSHLGVNTQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAS 288
Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
+ P IS TGV++GTI+ SYK +Y ++I P+W
Sbjct: 289 LVFGFDLPPSKISDKTGVSDGTIKTSYKYMYEEKEQLIDPSW 330
[131][TOP]
>UniRef100_Q2H1A6 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
RepID=Q2H1A6_CHAGB
Length = 353
Score = 82.4 bits (202), Expect = 2e-14
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 17/170 (10%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEK--------G 435
A C++IACRQ + PRT +E+ + +KKEIGR + ++ K G +K
Sbjct: 171 AGCIFIACRQTNVPRTFREVYGLTK-VSKKEIGRVFKQLESFLQKMGGEDKVAKATGYSQ 229
Query: 434 QSVEMGTIHAGDFMRRFCSNLNMNHQAVK----AAQEAVKKAEEFDIR-RSPISIAAAII 270
Q G+ A + R+CSNL + AV+ A + A K +E D+ RSP+S+AAA I
Sbjct: 230 QYTAKGSTTADELCIRYCSNLGFRN-AVRVESVARRLAEKSSEVSDLAGRSPLSVAAACI 288
Query: 269 YIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEE 120
Y+ + L + + K IS+ + V++GT++ +Y+ LY I+ EE
Sbjct: 289 YMASHLVGEPRSTKQISVVSSVSDGTVKTAYRYLYAAKDTILTKEVFSEE 338
[132][TOP]
>UniRef100_Q6KZC7 Transcription initiation factor IIB n=1 Tax=Picrophilus torridus
RepID=Q6KZC7_PICTO
Length = 304
Score = 82.4 bits (202), Expect = 2e-14
Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A +Y ACRQ + PRT+ EI A+ KK+IG+A ++ K+L L + +
Sbjct: 165 AAIYAACRQVNIPRTLDEISKAAD-INKKKIGKAYRHLAKELKLNLKPTTPYS------Y 217
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ +FC+ LN++ + ++E +++ E I + P +AAA IYI +S K K+I
Sbjct: 218 VSQFCNKLNLDKDVIIKSEEIIRRVNETGISAGKGPTGVAAAAIYIAAIISGKPKTQKEI 277
Query: 221 SIATGVAEGTIRNSYKDL 168
S +GV E TIRN YK++
Sbjct: 278 SKVSGVTEVTIRNRYKEI 295
[133][TOP]
>UniRef100_B9ZEE4 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii
ATCC 43099 RepID=B9ZEE4_NATMA
Length = 320
Score = 82.0 bits (201), Expect = 3e-14
Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
+ LY ACR+E PR+++EI V+ +KEIGR YI ++LGLE M + +
Sbjct: 182 SALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MRPVDPKKY 234
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RFCS L ++ + A E ++K E + +SP AAA IY + L ++KK +++
Sbjct: 235 VPRFCSELELSEEVQTKANEIIEKTAEEGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 294
Query: 221 SIATGVAEGTIRNSYKD 171
+ V E TIRN Y++
Sbjct: 295 ADVAQVTEVTIRNRYQE 311
[134][TOP]
>UniRef100_C8S977 Transcription factor TFIIB cyclin-related protein n=1
Tax=Ferroglobus placidus DSM 10642 RepID=C8S977_FERPL
Length = 346
Score = 81.6 bits (200), Expect = 4e-14
Identities = 44/135 (32%), Positives = 79/135 (58%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y ACR+ PRT+ E+ + ++ K+ +GRA ++ + LGL+ I + D
Sbjct: 207 AAAVYAACREAGLPRTLDEVAAHSS-VDKRSVGRAYRFLARTLGLKPAP------ITSTD 259
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
++ + C+ L ++ + + A E V +AE+ + RSP +AAA +YI + L +++ ++++
Sbjct: 260 YVPKICAALGVSGEVQERALEIVNEAEKSMVSRSPAGVAAAAVYIASILLGERRTQREVA 319
Query: 218 IATGVAEGTIRNSYK 174
GV E TIRN YK
Sbjct: 320 GVAGVTEVTIRNCYK 334
[135][TOP]
>UniRef100_B5IA78 TFIIB zinc-binding family n=1 Tax=Aciduliprofundum boonei T469
RepID=B5IA78_9EURY
Length = 312
Score = 81.6 bits (200), Expect = 4e-14
Identities = 52/139 (37%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y ACR PRT++EI +V K+EIGR + + L L + D
Sbjct: 171 AASIYAACRMLGIPRTLEEISTVTR-IKKREIGRVYRIMSRTLKLN------IYPTKPED 223
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS L ++ + K A E +K A E DI R P +AAA IYI L +++ ++
Sbjct: 224 YIDRFCSKLKLSGEVKKKAYEIIKMARERDIISGRGPTGVAAAAIYIAAILMGERRTQRE 283
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 284 VAEVAGVTEVTIRNRYKEL 302
[136][TOP]
>UniRef100_C4YES1 Transcription initiation factor IIB n=1 Tax=Candida albicans
RepID=C4YES1_CANAL
Length = 344
Score = 81.3 bits (199), Expect = 5e-14
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 14/162 (8%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432
AA ++I CR+ + R+ KEI ++ N +KEIG+ + I+ ++ EK
Sbjct: 171 AASIFIGCRKANVARSFKEIWALTN-VPRKEIGKVFK-IMDKIIREKNAANPNAAYYGQD 228
Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258
S++ A D +RRFCS+L +N Q A+ ++ +E + RSP +IAA +IY+ +
Sbjct: 229 SIQTTQTSAEDLIRRFCSHLGVNTQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAS 288
Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
+ P IS TGV++GTI+ SYK +Y ++I P W
Sbjct: 289 LVFGFDLPPSKISDKTGVSDGTIKTSYKYMYEEKEQLIDPFW 330
[137][TOP]
>UniRef100_Q701V6 Putative transcription initiation factor TFIIB n=1 Tax=uncultured
crenarchaeote RepID=Q701V6_9CREN
Length = 304
Score = 81.3 bits (199), Expect = 5e-14
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACR + PRT+K+I +N KK++ R ++++L L+ M +
Sbjct: 167 AAALYAACRDTETPRTLKDIAHASN-IKKKDVARCYRLLIRELDLK------MPVVDPVK 219
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
+ R S ++ + + A E +KKAE+ I + P+ +AAA +Y+ ++ + K KD
Sbjct: 220 CVARIASKSGLSEKTKRKALEILKKAEQGKISAGKDPMGLAAAALYVACVMNGENKTQKD 279
Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
++ A GV E TIRN YK L H+
Sbjct: 280 VAEAAGVTEVTIRNRYKGLKIHL 302
[138][TOP]
>UniRef100_B5IV88 TFIIB zinc-binding family n=1 Tax=Thermococcus barophilus MP
RepID=B5IV88_9EURY
Length = 306
Score = 81.3 bits (199), Expect = 5e-14
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AACLY ACR PRT+ EI VA KKEIGR+ +I ++L L + + D
Sbjct: 165 AACLYAACRMAKVPRTLDEIEEVAR-VDKKEIGRSYRFIARELHLRLTPTSPI------D 217
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF L ++ + A + ++KA + + R P+ +AAA +YI + L +KK ++
Sbjct: 218 YVSRFADQLGLSERTKNRAVKILQKAIKLGLTSGRGPMGVAAAALYIASVLEGEKKTQRE 277
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ V E T+RN YK+L
Sbjct: 278 VAEVAHVTEVTVRNRYKEL 296
[139][TOP]
>UniRef100_O23215 Transcription initiation factor like protein n=1 Tax=Arabidopsis
thaliana RepID=O23215_ARATH
Length = 503
Score = 80.9 bits (198), Expect = 7e-14
Identities = 56/154 (36%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
ACL A R+ +PRT++EI S+A +KEIG+ + + + L L + + ++H
Sbjct: 178 ACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEALQLSQPINSNSISVH---- 232
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K
Sbjct: 233 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 288
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
+I TG+ E T+R YK+L + ++P+ Y
Sbjct: 289 QAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 322
[140][TOP]
>UniRef100_Q0UK00 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UK00_PHANO
Length = 346
Score = 80.9 bits (198), Expect = 7e-14
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 18/176 (10%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMG------ 417
A C++IACR + R+ +EI + N +KKE+GR + + + L+K Q V
Sbjct: 171 AGCIFIACRNHGQQRSFREIFKMTN-VSKKEVGRTFKAL--EAFLQKNQKVGTASSNLLH 227
Query: 416 ---------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAII 270
T A + M R C+ L + A+E + E I RSP+SIA A++
Sbjct: 228 DTTNFQTGVTTSAENLMPRACNKLGLETYIQLVAEECARTVTEHGIAAGRSPLSIAGAVL 287
Query: 269 YIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEEDLKNL 105
Y+++ L K K+I +A V++GTIR +YK ++ +KII W + D L
Sbjct: 288 YLVSHLMGTPKTPKEIGLAVEVSDGTIRTAYKLMHAQANKIIKEDWIRRGGDRSKL 343
[141][TOP]
>UniRef100_B7XLP2 Transcription initiation factor IIB n=1 Tax=Enterocytozoon bieneusi
H348 RepID=B7XLP2_ENTBH
Length = 310
Score = 80.9 bits (198), Expect = 7e-14
Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
AC+YIAC+ E PRT +EI SV K+EIG+ + I K++ + + + ++ DF
Sbjct: 158 ACIYIACKTEGCPRTFQEI-SVITVVPKREIGKCYKLISKEMTRPESWAPQTLSV---DF 213
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPL-KD 225
+ LN+N + A+ KK ++ RSP SIA+AIIY+ L D L KD
Sbjct: 214 -----APLNLNAKIQNTARYIAKKVQDIGCLAGRSPDSIASAIIYLTLCLYPDFLFLQKD 268
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I T V + TIRN+YKDL P+ +IIP
Sbjct: 269 IQYVTNVTDVTIRNTYKDLLPYKKEIIP 296
[142][TOP]
>UniRef100_A8NYV2 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8NYV2_COPC7
Length = 662
Score = 80.9 bits (198), Expect = 7e-14
Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMG---TIH 408
AAC++IACR+ PRT +EIC++ +KK +G+ + + + L L +S+ + T
Sbjct: 493 AACIFIACRKAHVPRTFREICNLTR-VSKKMLGQCYKALEQSLNLSGPESMPLANTPTTG 551
Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKP 234
+ R+C++L++ E + A I RSPISIA IY L KP
Sbjct: 552 PEKLLVRYCNHLDLPANVQAICSEIIVNARNHGIADGRSPISIAGGAIYFTCLLLGKPKP 611
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKII 144
+++IS GV+EGTI+ Y+ Y K++
Sbjct: 612 IREISAVAGVSEGTIKLVYRLYYNDREKLV 641
[143][TOP]
>UniRef100_C5U6X1 Transcription factor TFIIB cyclin-related protein n=1
Tax=Methanocaldococcus infernus ME RepID=C5U6X1_9EURY
Length = 320
Score = 80.9 bits (198), Expect = 7e-14
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y ACR+ PRT+ EI V+ KKEIGR ++ ++L +++ + D
Sbjct: 179 AATIYAACRKYRVPRTLDEIAEVSR-VDKKEIGRTYRFLAREL------KIKLAPTNPID 231
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L + + A + +KKA E + R P +AAA IYI + L ++ ++
Sbjct: 232 YVPRFASELGLPGEVESKAIQILKKAAEKGLTSGRGPTGVAAAAIYIASVLLGHRRTQRE 291
Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
++ GV E TIRN YK+L H+
Sbjct: 292 VAEVAGVTEVTIRNRYKELTEHL 314
[144][TOP]
>UniRef100_Q0CNZ3 Transcription initiation factor IIB n=1 Tax=Aspergillus terreus
NIH2624 RepID=Q0CNZ3_ASPTN
Length = 351
Score = 80.5 bits (197), Expect = 9e-14
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 21/181 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVK--QLGLEKGQSVEMG---- 417
A C++IACRQ + PRT +EI +V ++KEIGR + + K Q ++ Q+ +
Sbjct: 171 AGCIFIACRQRNVPRTFQEIFAVTK-VSRKEIGRIYKALEKFFQAQNKERQNAVLSSGGV 229
Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQE-AVKKAEEFDIR-RSPISIAAA 276
T D RFC+ L++ +Q + A + D+ RSP+SI AA
Sbjct: 230 PDPNDTYTATTTTRPSDLCNRFCNLLDLPYQVTSVSSALADHVTTKGDLAGRSPLSIVAA 289
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNLS 102
IY+ + L KP K+IS V++ TIR +YK LY +++ P W + +LKNL
Sbjct: 290 CIYMASYLMGHGKPAKEISTVAHVSDSTIRGAYKQLYAKRERLVDPEWIKDGKGNLKNLP 349
Query: 101 S 99
S
Sbjct: 350 S 350
[145][TOP]
>UniRef100_Q3IMH4 Transcription initiation factor TFB 8 n=1 Tax=Natronomonas
pharaonis DSM 2160 RepID=Q3IMH4_NATPD
Length = 325
Score = 80.5 bits (197), Expect = 9e-14
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A LY ACR+E PR+++EI V+ +KEIGR YI ++LGLE M + +
Sbjct: 187 AALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MEPVDPQKY 239
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RFCS L ++ + A++ ++ E + +SP AAA IY + L ++KK +++
Sbjct: 240 VPRFCSELELSEEVQSKAKDIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 299
Query: 221 SIATGVAEGTIRNSYKD 171
+ V E TIRN Y++
Sbjct: 300 AEVAQVTEVTIRNRYQE 316
[146][TOP]
>UniRef100_B6YXB2 Transcription initiation factor IIB n=1 Tax=Thermococcus onnurineus
NA1 RepID=B6YXB2_THEON
Length = 303
Score = 80.5 bits (197), Expect = 9e-14
Identities = 48/148 (32%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+A LY ACR E PRT+ EI +V+ TKKEIGR+ ++ + LGL + + +
Sbjct: 162 SAALYAACRMEGIPRTLDEIAAVSK-VTKKEIGRSYRFLARGLGLNLRPTSPI------E 214
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF +L+++ + K A+E +++A + I + P +AAA +Y+ + L +KK ++
Sbjct: 215 YIDRFGDSLDVSQRTKKRAKEILQEAIKRGITSGKGPTGLAAAALYVASLLEGEKKTQRE 274
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
++ V E T+RN YK+L + +P
Sbjct: 275 VAEVAHVTEVTVRNRYKELVEKLGINVP 302
[147][TOP]
>UniRef100_Q93YB0 TFIIB-related protein (Fragment) n=1 Tax=Spinacia oleracea
RepID=Q93YB0_SPIOL
Length = 414
Score = 80.1 bits (196), Expect = 1e-13
Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
ACL A R+ +PRT++EI S+A +KEIG+ + + + L L + + +H
Sbjct: 171 ACLVQAIREAQEPRTLQEI-SIAANLPQKEIGKYIKILGEALQLSQPINSNSIAVH---- 225
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K
Sbjct: 226 MPRFCNLLQLN----KSAQELATHIGEVVMNKCFCTRRNPISISAAAIYLACQLEDRRKT 281
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
+I TG+ E T+R YK+L + ++P+ Y
Sbjct: 282 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY 315
[148][TOP]
>UniRef100_Q6Z467 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=Q6Z467_ORYSJ
Length = 362
Score = 80.1 bits (196), Expect = 1e-13
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 13/121 (10%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVAN--GATKKEIGRAKEYIVKQLGLEK---GQSVEMGT 414
AACL+ ACR E PRT+KE+ + + ATK+++G+ I + LG+E+ Q+ +M
Sbjct: 182 AACLHAACRVEGAPRTLKELIAATSDAAATKRDLGKFINAIKRHLGMEERGQDQAADMKA 241
Query: 413 --------IHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIIT 258
+ AGD++ R+ S + M+ Q AA+ A + + D+RR+P SIAAAI+Y+
Sbjct: 242 SGGGVGVVVRAGDYLHRYGSAVGMSGQEASAARRAAGRLDSLDVRRNPQSIAAAIVYMAA 301
Query: 257 Q 255
Q
Sbjct: 302 Q 302
[149][TOP]
>UniRef100_Q18KT7 Transcription initiation factor TFB n=1 Tax=Haloquadratum walsbyi
DSM 16790 RepID=Q18KT7_HALWD
Length = 329
Score = 80.1 bits (196), Expect = 1e-13
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
+ LY ACR+E PR+++EI V+ +KEIGR YI ++LGLE M + +
Sbjct: 191 SALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MRPVDPKKY 243
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RFCS L+++ + A E ++ E + +SP AAA IY + L ++KK +++
Sbjct: 244 VPRFCSELDLSKEVQSKADEIIETTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 303
Query: 221 SIATGVAEGTIRNSYKD 171
+ V E TIRN Y++
Sbjct: 304 ADVAQVTEVTIRNRYQE 320
[150][TOP]
>UniRef100_C7NMT2 Transcription factor TFIIB cyclin-related n=1 Tax=Halorhabdus
utahensis DSM 12940 RepID=C7NMT2_HALUD
Length = 321
Score = 80.1 bits (196), Expect = 1e-13
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
+ LY ACR+E PR+++EI V+ +KEIGR YI ++LGLE M + +
Sbjct: 183 SALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MEPVDPKKY 235
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RFCS L ++ + A E ++ E + +SP AAA IY + L ++KK +++
Sbjct: 236 VPRFCSELELSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 295
Query: 221 SIATGVAEGTIRNSYKD 171
+ V E TIRN Y++
Sbjct: 296 ADVAQVTEVTIRNRYQE 312
[151][TOP]
>UniRef100_O26971 Transcription initiation factor IIB n=1 Tax=Methanothermobacter
thermautotrophicus str. Delta H RepID=TF2B_METTH
Length = 310
Score = 80.1 bits (196), Expect = 1e-13
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACR+ + PRT+ EI V+ +KKE+GR ++ ++L ++++ D
Sbjct: 169 AASLYAACRKCNVPRTLDEIAEVSR-VSKKEVGRTYRFLTREL------NIKLPPTSPVD 221
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L ++ + A E ++ A E + R P +AAA +YI + L + K +D
Sbjct: 222 YVPRFASELGLSGEVQSKAIEIIEMAMENGLTSGRGPTGVAAAALYIASVLLGEHKTQRD 281
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 282 VAEVAGVTEVTIRNRYKEL 300
[152][TOP]
>UniRef100_B3T9W7 Putative transcription factor TFIIB repeat protein n=1
Tax=uncultured marine microorganism HF4000_APKG7N23
RepID=B3T9W7_9ZZZZ
Length = 242
Score = 79.7 bits (195), Expect = 1e-13
Identities = 53/139 (38%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACR+ + PRT+ EI A+ A+KKE+GR YI ++L L +
Sbjct: 101 AAALYGACRRCEVPRTLSEITE-ASRASKKEVGRTYRYISRELKLN------LQPASPAV 153
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFC L + AA + +A E ++ R P +AAA IYI + + D +K K
Sbjct: 154 YIIRFCRELELPGYVESAAINILNQAIEAELTSGRGPTGVAAAAIYIASVVYDQRKTQKT 213
Query: 224 ISIATGVAEGTIRNSYKDL 168
I+ GV E TIRN YK+L
Sbjct: 214 IADTVGVTEVTIRNRYKEL 232
[153][TOP]
>UniRef100_Q9HSF7 Transcription initiation factor IIB 7 n=2 Tax=Halobacterium
salinarum RepID=TF2B7_HALSA
Length = 323
Score = 79.7 bits (195), Expect = 1e-13
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
+ LY ACR+E PR+++EI V+ +KEIGR YI ++LGLE M + +
Sbjct: 185 SALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MKPVDPKKY 237
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RFCS L + + A E ++ E + +SP AAA IY + L ++KK +++
Sbjct: 238 VPRFCSELELTEEVQSKANEIIETTAEEGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 297
Query: 221 SIATGVAEGTIRNSYKD 171
+ V E TIRN Y++
Sbjct: 298 ADVAQVTEVTIRNRYQE 314
[154][TOP]
>UniRef100_C5G9X7 Transcription initiation factor IIB n=2 Tax=Ajellomyces
dermatitidis RepID=C5G9X7_AJEDR
Length = 352
Score = 79.3 bits (194), Expect = 2e-13
Identities = 62/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
A C++IACRQ PRT EI +V TKKEIGR A E LE+ SV
Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230
Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
+ D RFC+ L++ Q + + RSP+SI AA
Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGDLAGRSPLSIVAA 290
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
IY+ + L K K+IS V++GTIR +YK LY ++I P W + D+KNL
Sbjct: 291 SIYMASFLMGQGKSAKEISSVAHVSDGTIRGAYKQLYAERERLIDPAWIKDGKGDMKNL 349
[155][TOP]
>UniRef100_A3DNM2 Transcription initiation factor IIB (TFIIB) n=1 Tax=Staphylothermus
marinus F1 RepID=A3DNM2_STAMF
Length = 309
Score = 79.3 bits (194), Expect = 2e-13
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y ACR+ PRT+ EI +++K+I R ++K+L +++ T D
Sbjct: 167 AAAIYAACRELKIPRTLDEIAKHTK-SSRKDIARCYRLLLKEL------DIKVQTSDPID 219
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
F+ R LN++ +K A E + +A + P +AAA +YI QLS +++ K+
Sbjct: 220 FIPRIAHALNLSGSVMKKAAEILHRARSLGVTAGNDPAGLAAAAVYIAAQLSGERRTQKE 279
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
I+ GV E T+RN YK+L + +PT
Sbjct: 280 IAHVAGVTEVTVRNRYKELAKELGIDLPT 308
[156][TOP]
>UniRef100_Q05959 Transcription initiation factor IIB n=1 Tax=Kluyveromyces lactis
RepID=TF2B_KLULA
Length = 357
Score = 79.3 bits (194), Expect = 2e-13
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ---------SV 426
A+ + + CR+ + R+ KEI S+ N KKEIG+ I+K + EK ++
Sbjct: 177 ASVILVGCRRAEVGRSFKEILSLTN-VRKKEIGKTFT-IIKNILREKNDRGFANIDTSNI 234
Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL 252
G A F+ RFCS+L ++ Q AA+ K +++ ++ RSPI+IAAA IY+ T L
Sbjct: 235 TTGQTSAETFIPRFCSHLGLSVQVANAAEYIAKHSKDVNVLAGRSPITIAAAAIYMATLL 294
Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144
IS V EGT++ YK LY H K++
Sbjct: 295 FKLNISPTRISQTLQVTEGTVKGGYKALYEHKEKVV 330
[157][TOP]
>UniRef100_C0S3L3 Transcription initiation factor IIB n=3 Tax=Paracoccidioides
brasiliensis RepID=C0S3L3_PARBP
Length = 352
Score = 79.0 bits (193), Expect = 3e-13
Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
A C++IACRQ PRT EI +V TKKEIGR A E LE+ SV
Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230
Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
+ D RFC+ L++ Q + + RSP+SI AA
Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGELAGRSPLSIVAA 290
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
IY+ + L K K+IS V++GTIR +YK +Y ++I P W + D+KNL
Sbjct: 291 SIYMASFLMGQGKSAKEISTVAHVSDGTIRGAYKQIYAERERLIDPAWIKDGKGDMKNL 349
[158][TOP]
>UniRef100_A6RGN6 Transcription initiation factor IIB n=1 Tax=Ajellomyces capsulatus
NAm1 RepID=A6RGN6_AJECN
Length = 352
Score = 79.0 bits (193), Expect = 3e-13
Identities = 62/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
A C++IACRQ PRT EI +V TKKEIGR A E LE+ SV
Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230
Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
+ D RFC+ L++ Q + + RSP+SI AA
Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGELAGRSPLSIVAA 290
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
IY+ + L K K+IS V++GTIR +YK LY ++I P W + DL+NL
Sbjct: 291 SIYMASFLMGQGKTAKEISSVAHVSDGTIRGAYKQLYAERERLIDPAWIKDGKGDLRNL 349
[159][TOP]
>UniRef100_O58594 208aa long hypothetical transcription initiation factor IIB n=1
Tax=Pyrococcus horikoshii RepID=O58594_PYRHO
Length = 208
Score = 79.0 bits (193), Expect = 3e-13
Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AAC+YI+CR PRT+ EI VA KK I R +VK+LGL + I
Sbjct: 67 AACIYISCRLYKVPRTLDEIAKVAK-EDKKVIARVYRLVVKKLGLSSKDML----IRPEY 121
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ +F L ++ + + A + +A++ I ++P+ +AA+I+YI + L +++ K+
Sbjct: 122 YIDKFADELEVSERVKRRALRLLNEAKDKGITSGKNPLGLAASILYIASLLEGERRTQKE 181
Query: 224 ISIATGVAEGTIRNSYKDL 168
I+ G+ E TIRN YK+L
Sbjct: 182 IARVAGITEVTIRNRYKEL 200
[160][TOP]
>UniRef100_C6A4U9 Transcription initiation factor IIB 2 n=1 Tax=Thermococcus
sibiricus MM 739 RepID=C6A4U9_THESM
Length = 272
Score = 79.0 bits (193), Expect = 3e-13
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+ACLY ACR + PRT+ EI + KKEIGR+ Y+V++L L+ + + D
Sbjct: 131 SACLYAACRIANAPRTLDEIEDFSK-VDKKEIGRSYRYLVRELNLK------LRPTNPVD 183
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF L + + + A V +A + + + P IAAA IYI + L +K ++
Sbjct: 184 YVVRFGDQLGVTEKTKRRAMRIVNQAIKMGLTSGKGPTGIAAAAIYIASLLEGEKMTQRE 243
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
++ V E T+RN YK+L ++ IPT
Sbjct: 244 VAEVARVTEVTVRNRYKELVDKLNIRIPT 272
[161][TOP]
>UniRef100_Q6M176 Transcription initiation factor IIB n=1 Tax=Methanococcus
maripaludis RepID=TF2B_METMP
Length = 339
Score = 79.0 bits (193), Expect = 3e-13
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACR+ PRT+ EI V+ +KEIGR +I ++L ++ + + D
Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 250
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L + + A ++KA E + R P +AAA IYI + L ++ ++
Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGERGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 310
Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
++ GV E TIRN YK+L H+
Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333
[162][TOP]
>UniRef100_A6VI28 Transcription initiation factor IIB n=1 Tax=Methanococcus
maripaludis C7 RepID=TF2B_METM7
Length = 339
Score = 79.0 bits (193), Expect = 3e-13
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACR+ PRT+ EI V+ +KEIGR +I ++L ++ + + D
Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 250
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L + + A ++KA E + R P +AAA IYI + L ++ ++
Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGEKGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 310
Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
++ GV E TIRN YK+L H+
Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333
[163][TOP]
>UniRef100_A9A8Q0 Transcription initiation factor IIB n=1 Tax=Methanococcus
maripaludis C6 RepID=TF2B_METM6
Length = 339
Score = 79.0 bits (193), Expect = 3e-13
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACR+ PRT+ EI V+ +KEIGR +I ++L ++ + + D
Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 250
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L + + A ++KA E + R P +AAA IYI + L ++ ++
Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGEKGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 310
Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
++ GV E TIRN YK+L H+
Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333
[164][TOP]
>UniRef100_A4G0F2 Transcription initiation factor IIB n=1 Tax=Methanococcus
maripaludis C5 RepID=TF2B_METM5
Length = 339
Score = 79.0 bits (193), Expect = 3e-13
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACR+ PRT+ EI V+ +KEIGR +I ++L ++ + + D
Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 250
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L + + A ++KA E + R P +AAA IYI + L ++ ++
Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGEKGLTSSRGPTGVAAAAIYIASVLQGTRRTQRE 310
Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
++ GV E TIRN YK+L H+
Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333
[165][TOP]
>UniRef100_Q6BPC4 DEHA2E14762p n=1 Tax=Debaryomyces hansenii RepID=Q6BPC4_DEBHA
Length = 346
Score = 78.6 bits (192), Expect = 3e-13
Identities = 53/170 (31%), Positives = 94/170 (55%), Gaps = 14/170 (8%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432
AA ++I CR+ R+ KEI ++ N +KEIG+ + I+ ++ EK
Sbjct: 173 AAAIFIGCRKAKVARSFKEIWALTN-VPRKEIGKVFK-IMNKIIQEKNAANPNAYSLIQD 230
Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258
+++ A D +RRFCS+L ++ Q AA+ ++ ++ + RSPI+IAA +IY+
Sbjct: 231 NMQTTQTSAEDLIRRFCSHLGLSTQVTNAAEHIARRCKDVGVLAGRSPITIAATVIYMAA 290
Query: 257 QL-SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLK 111
+ D +P K I+ TGV++GTI+ SYK +Y ++I ++ + +K
Sbjct: 291 LVFGADLQPSK-IADKTGVSDGTIKTSYKVMYEEKERLIDPYWVESGKVK 339
[166][TOP]
>UniRef100_C6HRH5 Transcription initiation protein n=1 Tax=Ajellomyces capsulatus
H143 RepID=C6HRH5_AJECH
Length = 352
Score = 78.6 bits (192), Expect = 3e-13
Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
A C++IACRQ PRT EI +V TKKEIGR A E LE+ SV
Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230
Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
+ D RFC+ L++ Q + + RSP+SI AA
Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGELAGRSPLSIVAA 290
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
IY+ + L K K+IS V++GTIR +YK LY +++ P W + DL+NL
Sbjct: 291 SIYMASFLMGQGKTAKEISSVAHVSDGTIRGAYKQLYAERERLVDPAWIKDGKGDLRNL 349
[167][TOP]
>UniRef100_C0NUV9 Transcription initiation protein n=1 Tax=Ajellomyces capsulatus
G186AR RepID=C0NUV9_AJECG
Length = 352
Score = 78.6 bits (192), Expect = 3e-13
Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
A C++IACRQ PRT EI +V TKKEIGR A E LE+ SV
Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230
Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
+ D RFC+ L++ Q + + RSP+SI AA
Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGELAGRSPLSIVAA 290
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
IY+ + L K K+IS V++GTIR +YK LY +++ P W + DL+NL
Sbjct: 291 SIYMASFLMGQGKTAKEISSVAHVSDGTIRGAYKQLYAERERLVDPAWIKDGKGDLRNL 349
[168][TOP]
>UniRef100_B9WLX5 Transcription initiation factor IIB, putative (General
transcription facto tfiib, putative) n=1 Tax=Candida
dubliniensis CD36 RepID=B9WLX5_CANDC
Length = 346
Score = 78.6 bits (192), Expect = 3e-13
Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 13/161 (8%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATK---KEIGRAKEYIVKQLGLEKG------QSV 426
AA + + CR+ D PRT++EI ++ N TK K G K+ I L E ++
Sbjct: 172 AAAILLGCRRADVPRTLEEIRALTNVPTKQIAKVTGLIKKIIRSHLNNEDASTSIVDETS 231
Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ- 255
+ T A D +RRFCS+L ++ A++ +K + + RSP +IAA I++ +
Sbjct: 232 SLTTHSAEDLIRRFCSHLGLSLTITSASEYVARKCHDLGVLAGRSPTTIAATSIFLAAKS 291
Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
L D K + I TGV+ GTI+NSYK L + +I P W
Sbjct: 292 LGDTKLTQQQIRDKTGVSIGTIKNSYKILQENAKDLIDPAW 332
[169][TOP]
>UniRef100_B0CXM4 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0CXM4_LACBS
Length = 349
Score = 78.6 bits (192), Expect = 3e-13
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402
AAC++IACRQ PRT +EIC + + +KK +G+ + + + L G S + +
Sbjct: 179 AACIFIACRQAHVPRTFREICDLTH-VSKKILGQCYKALEQAFNLTPGASAAHASNNPAT 237
Query: 401 ---DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKK 237
+ + R+C++L++ + + A + I RSP+SIA IY L K
Sbjct: 238 GPENLLVRYCNHLDLPPNVQSICSDIIVAARKHGIADGRSPVSIAGGAIYFTCYLLGKNK 297
Query: 236 PLKDISIATGVAEGTIRNSYKDLYPHVSKII 144
+DIS GV+EGTIR Y+ Y K++
Sbjct: 298 SPRDISAVAGVSEGTIRLVYRLYYAEKEKLV 328
[170][TOP]
>UniRef100_A4RNY3 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
RepID=A4RNY3_MAGGR
Length = 371
Score = 78.6 bits (192), Expect = 3e-13
Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 24/161 (14%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSV----- 426
A C++IACR E PRT +EI ++ N +KKEIGR +EY+ K +G +
Sbjct: 173 AGCIFIACRMEKVPRTFREIHALTN-VSKKEIGRTYKALEEYVKKVNYENRGGAAAVDHK 231
Query: 425 ---------EMGT--IHAGDFMRRFCSNLN--MNHQAVKAAQEAVKKAEEF-DIR-RSPI 291
+M T A R+CS L ++H A + A +K+ D+ RSP+
Sbjct: 232 MPTADDDDDDMATKGTTAESLCTRYCSILGFRVSHLAERVAMHLARKSSSVADLAGRSPL 291
Query: 290 SIAAAIIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDL 168
S+AAA IY+++ L + + KDI++ GV++GTI+ +YK L
Sbjct: 292 SVAAACIYMMSHLIGEPRTSKDIAVVAGVSDGTIKTAYKFL 332
[171][TOP]
>UniRef100_Q8U2Z1 Transcription initiation factor IIB chain b homolog n=1
Tax=Pyrococcus furiosus RepID=Q8U2Z1_PYRFU
Length = 283
Score = 78.6 bits (192), Expect = 3e-13
Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AAC+Y CR PRT+ EI S + KKEI +A IV+ L L + T D
Sbjct: 139 AACIYATCRLFKVPRTLNEIASYSK-TEKKEIMKAFRVIVRNLNLTPKMLLARPT----D 193
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ +F L ++ + + + +++A E I ++P+S+ AA +YI + L +++ K+
Sbjct: 194 YVDKFADELELSERVRRRTVDILRRANEEGITSGKNPLSLVAAALYIASLLEGERRSQKE 253
Query: 224 ISIATGVAEGTIRNSYKDL 168
I+ TGV+E T+RN YK+L
Sbjct: 254 IARVTGVSEMTVRNRYKEL 272
[172][TOP]
>UniRef100_A6UR19 Transcription factor TFIIB cyclin-related n=1 Tax=Methanococcus
vannielii SB RepID=A6UR19_METVS
Length = 339
Score = 78.6 bits (192), Expect = 3e-13
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACR+ PRT+ EI V+ +KEIGR +I ++L ++ + + D
Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPID 250
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L + + A ++KA E + R P +AAA IYI + L ++ ++
Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGERGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 310
Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
++ GV E TIRN YK+L H+
Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333
[173][TOP]
>UniRef100_Q2NEL6 Transcription initiation factor IIB n=1 Tax=Methanosphaera
stadtmanae DSM 3091 RepID=TF2B_METST
Length = 311
Score = 78.6 bits (192), Expect = 3e-13
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACR+ PRT+ EI V+ +KKE+GR ++ ++L + + + D
Sbjct: 170 AASLYAACRRCKVPRTLDEIADVSR-VSKKEVGRTYRFLTRELHIRLPPTSPI------D 222
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S LN++ A E + +A + + R P +AAA +YI + L ++K +D
Sbjct: 223 YVPRFASELNLSGVVQSKAIEIINQAMDNGLTSGRGPTGVAAAALYIASVLLGERKTQRD 282
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 283 VADIAGVTEVTIRNRYKEL 301
[174][TOP]
>UniRef100_Q9FYX3 BAC19.3 n=1 Tax=Solanum lycopersicum RepID=Q9FYX3_SOLLC
Length = 425
Score = 78.2 bits (191), Expect = 4e-13
Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A L A R+ +PRT++EI SVA +KEIG+ + + + L L + + ++H
Sbjct: 178 AALVHAIREAQEPRTLQEI-SVAANLPQKEIGKYIKILGEALQLSQPINSNSISVH---- 232
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K
Sbjct: 233 MPRFCTLLQLN----KSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKT 288
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
+I TG+ E T+R YK+L + ++P+ Y
Sbjct: 289 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSSY 322
[175][TOP]
>UniRef100_Q93WQ2 TFIIB-related protein (Fragment) n=1 Tax=Zea mays
RepID=Q93WQ2_MAIZE
Length = 469
Score = 78.2 bits (191), Expect = 4e-13
Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A L A R+ +PRT++EI S A+ +KEIG+ + + + L L + + +H
Sbjct: 131 AALVQAIREAQQPRTLQEI-STASNLPQKEIGKYIKILGESLKLSQPLNSNSIAVH---- 185
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
M RFCS L +N K+AQE E F RR+PISI+AA IY+ QL D +K
Sbjct: 186 MPRFCSLLQLN----KSAQELAAHIGEVVANKCFCTRRNPISISAAAIYLACQLEDKRKT 241
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
+I TG+ E T+R YK+L + ++P Y
Sbjct: 242 QAEICKVTGLTEVTLRKVYKELLENWDDLLPPDY 275
[176][TOP]
>UniRef100_C5WUN9 Putative uncharacterized protein Sb01g044030 n=1 Tax=Sorghum
bicolor RepID=C5WUN9_SORBI
Length = 533
Score = 78.2 bits (191), Expect = 4e-13
Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A L A R+ +PRT++EI S A+ +KEIG+ + + + L L + + +H
Sbjct: 194 AALVQAIREAQQPRTLQEI-STASNLPQKEIGKYIKILGESLKLSQPLNSNSIAVH---- 248
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
M RFCS L +N K+AQE E F RR+PISI+AA IY+ QL D +K
Sbjct: 249 MPRFCSLLQLN----KSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKT 304
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
+I TG+ E T+R YK+L + ++P Y
Sbjct: 305 QAEICKVTGLTEVTLRKVYKELLENWDDLLPPDY 338
[177][TOP]
>UniRef100_B9VXZ5 Transcription factor IIB n=1 Tax=Capsicum annuum RepID=B9VXZ5_CAPAN
Length = 426
Score = 78.2 bits (191), Expect = 4e-13
Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A L A R+ +PRT++EI SVA +KEIG+ + + + L L + + ++H
Sbjct: 179 AALVHAIREAQEPRTLQEI-SVAANLPQKEIGKYIKILGEALQLSQPINSNSISVH---- 233
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K
Sbjct: 234 MPRFCTLLQLN----KSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKT 289
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
+I TG+ E T+R YK+L + ++P+ Y
Sbjct: 290 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSSY 323
[178][TOP]
>UniRef100_A9XLD7 Putative uncharacterized protein n=1 Tax=Capsicum frutescens
RepID=A9XLD7_CAPFR
Length = 426
Score = 78.2 bits (191), Expect = 4e-13
Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A L A R+ +PRT++EI SVA +KEIG+ + + + L L + + ++H
Sbjct: 179 AALVHAIREAQEPRTLQEI-SVAANLPQKEIGKYIKILGEALQLSQPINSNSISVH---- 233
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K
Sbjct: 234 MPRFCTLLQLN----KSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKT 289
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
+I TG+ E T+R YK+L + ++P+ Y
Sbjct: 290 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSSY 323
[179][TOP]
>UniRef100_A3AF39 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=A3AF39_ORYSJ
Length = 501
Score = 78.2 bits (191), Expect = 4e-13
Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A L A R+ +PRT++EI S A+ +KEIG+ + + + L L + + +H
Sbjct: 169 AALVQAIREAQEPRTLQEI-STASNLPQKEIGKYIKILGESLKLSQPLNSNSIAVH---- 223
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
M RFCS L +N K+AQE E F RR+PISI+AA IY+ QL D +K
Sbjct: 224 MPRFCSLLQLN----KSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKT 279
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
+I TG+ E T+R YK+L + ++P Y
Sbjct: 280 QAEICKVTGLTEVTLRKVYKELLENWDDLLPPNY 313
[180][TOP]
>UniRef100_A2XDJ3 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2XDJ3_ORYSI
Length = 529
Score = 78.2 bits (191), Expect = 4e-13
Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A L A R+ +PRT++EI S A+ +KEIG+ + + + L L + + +H
Sbjct: 197 AALVQAIREAQEPRTLQEI-STASNLPQKEIGKYIKILGESLKLSQPLNSNSIAVH---- 251
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
M RFCS L +N K+AQE E F RR+PISI+AA IY+ QL D +K
Sbjct: 252 MPRFCSLLQLN----KSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKT 307
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
+I TG+ E T+R YK+L + ++P Y
Sbjct: 308 QAEICKVTGLTEVTLRKVYKELLENWDDLLPPNY 341
[181][TOP]
>UniRef100_Q59K82 Transcription initiation factor IIB n=1 Tax=Candida albicans
RepID=Q59K82_CANAL
Length = 346
Score = 78.2 bits (191), Expect = 4e-13
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 13/166 (7%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATK---KEIGRAKEYIVKQLGLEKG------QSV 426
AA + + CR+ D PRT++EI ++ N TK K G K+ I L + ++
Sbjct: 172 AATILLGCRRADVPRTLEEIRALTNVPTKQIAKVTGLIKKIIRSHLNNDDASTSIVDETS 231
Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ- 255
+ T A D +RRFCS+L ++ A++ +K + + RSP +IAA I++ +
Sbjct: 232 SLTTHSAEDLIRRFCSHLGLSLAITSASEYVARKCHDLGVLAGRSPTTIAATSIFLAAKS 291
Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEE 120
L D K + I TGV+ GTI+NSYK L + +I P W A +
Sbjct: 292 LGDTKLTQQQIRDKTGVSIGTIKNSYKILQENAKDLIDPAWEANSK 337
[182][TOP]
>UniRef100_UPI0001983170 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001983170
Length = 540
Score = 77.8 bits (190), Expect = 6e-13
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A L A R+ +PRT++EI S+A +KEIG+ + + + L L + + ++H
Sbjct: 198 AALVQAIREAQEPRTLQEI-SIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH---- 252
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K
Sbjct: 253 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 308
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
+I TG+ E T+R YK+L + ++P+ Y
Sbjct: 309 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY 342
[183][TOP]
>UniRef100_B9S6G3 RNA polymerase II transcription factor, putative n=1 Tax=Ricinus
communis RepID=B9S6G3_RICCO
Length = 511
Score = 77.8 bits (190), Expect = 6e-13
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A L A R+ +PRT++EI S+A +KEIG+ + + + L L + + ++H
Sbjct: 178 AALVQAIREAQEPRTLQEI-SIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH---- 232
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K
Sbjct: 233 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 288
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
+I TG+ E T+R YK+L + ++P+ Y
Sbjct: 289 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY 322
[184][TOP]
>UniRef100_A7PUX2 Chromosome chr4 scaffold_32, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PUX2_VITVI
Length = 523
Score = 77.8 bits (190), Expect = 6e-13
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A L A R+ +PRT++EI S+A +KEIG+ + + + L L + + ++H
Sbjct: 181 AALVQAIREAQEPRTLQEI-SIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH---- 235
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K
Sbjct: 236 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 291
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
+I TG+ E T+R YK+L + ++P+ Y
Sbjct: 292 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY 325
[185][TOP]
>UniRef100_C5P9R2 Transcription initiation factor IIB, putative n=2 Tax=Coccidioides
RepID=C5P9R2_COCP7
Length = 353
Score = 77.8 bits (190), Expect = 6e-13
Identities = 60/179 (33%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
A C++IACRQ PRT EI ++ +KKEIGR A E LE+ SV
Sbjct: 173 AGCIFIACRQCKVPRTFTEIFALTR-VSKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 231
Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
+ D RFC+ L++ Q + + RSP+SI AA
Sbjct: 232 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSMGDLAGRSPLSIVAA 291
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
IY+ + L K K+IS V++GTIR +YK LY ++I P W + D+KNL
Sbjct: 292 SIYMASFLMGQGKSAKEISAVAHVSDGTIRGAYKQLYAERERLIDPAWIKDGKGDMKNL 350
[186][TOP]
>UniRef100_C5M3D9 Transcription initiation factor IIB n=1 Tax=Candida tropicalis
MYA-3404 RepID=C5M3D9_CANTT
Length = 347
Score = 77.8 bits (190), Expect = 6e-13
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKK--EIGRA-KEYIVKQLGLEKG------QSV 426
A+ + + CR+ + PRT++EI ++ N TK+ +I R K+ I L + ++
Sbjct: 173 ASTILLGCRRAEVPRTLEEIRALTNVPTKQIAKITRLIKKIIHSHLNSDDAAAAIVDETT 232
Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ- 255
+ T A D +RRFCS+L +N ++ +K E I RSP +IAA IY+ +
Sbjct: 233 NLTTHSAEDLIRRFCSHLGLNPIITNGSEYIARKCNELGILAGRSPTTIAATSIYLAAKV 292
Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
L D K + I TGV+ GTI+NSYK LY +++ P+W
Sbjct: 293 LGDTKLTQQQIRDKTGVSIGTIKNSYKILYEKARELVDPSW 333
[187][TOP]
>UniRef100_C5DJ37 KLTH0F13200p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DJ37_LACTC
Length = 359
Score = 77.8 bits (190), Expect = 6e-13
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQS----VEMGTI 411
A+ + + CR+ + R+ KEI S+ N KKEIG+ I+K + EK + ++ TI
Sbjct: 177 ASVILVGCRRAEVGRSFKEILSLTN-VKKKEIGKTFT-IIKSILREKNANGFANIDTATI 234
Query: 410 HAGD-----FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL 252
+G F+ RFCS+L ++ Q AA+ K ++ ++ +SPI+IAA+ IY+ QL
Sbjct: 235 SSGQTSAETFIPRFCSHLGLSVQIANAAEYTAKHCKDINVLAGKSPITIAASAIYLAIQL 294
Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP*IIEKN 78
+S V EGTI+ YK LY K++ + S P + +KN
Sbjct: 295 FKVNISASQVSHTLQVTEGTIKGGYKILYEFRDKVVDPQLIASGKISFDSLPKVNDKN 352
[188][TOP]
>UniRef100_C4QVZ4 Transcription factor TFIIB, a general transcription factor n=1
Tax=Pichia pastoris GS115 RepID=C4QVZ4_PICPG
Length = 342
Score = 77.8 bits (190), Expect = 6e-13
Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL--------GLEKGQSVE 423
AA + +ACR+ + PR+ KE+ ++ + K EIG+ + I K + GL Q+
Sbjct: 169 AAAIGLACRKANVPRSFKELWALTD-VPKNEIGKVFKIIHKLIQQKHALAGGLLNVQNES 227
Query: 422 MGTI--HAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ 255
+ T +A + RFCSNL ++ Q AA+ ++ +E + RSP+++AA +IY+
Sbjct: 228 IATTQTNAEALIGRFCSNLGLSRQITNAAEYIARRTKEVGVLAGRSPVTVAATVIYMAAS 287
Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
+ D I+ GV++GTI+ SYK LY +++ P W
Sbjct: 288 IFDASISPAQIAQRAGVSDGTIKTSYKYLYDKREELVDPQW 328
[189][TOP]
>UniRef100_B6Q1D2 Transcription initiation protein n=1 Tax=Penicillium marneffei ATCC
18224 RepID=B6Q1D2_PENMQ
Length = 341
Score = 77.8 bits (190), Expect = 6e-13
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402
A C++IACRQ PRT EI +V ++KEIGR + + K + + + AG
Sbjct: 168 AGCIFIACRQCQAPRTFSEIFAVTK-VSRKEIGRIYKSLEKFFTAQNIERTAVVGADAGF 226
Query: 401 ---------DFMRRFCSNLNMNHQAVKAAQEAVKKA-EEFDIR-RSPISIAAAIIYIITQ 255
D RF S L ++++ +A + + ++ D+ RSP+SI AA +Y+++
Sbjct: 227 KQTTSTKPSDLCERFGSFLGLDYRTWHSAADLSDRVTKDGDLAGRSPLSIVAACLYMVSH 286
Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144
L K K+IS GV++GTIR +YK LY ++I
Sbjct: 287 LCGVPKSAKEISAVVGVSDGTIRGAYKQLYAERDRLI 323
[190][TOP]
>UniRef100_B0XXT9 Transcription initiation protein n=2 Tax=Aspergillus fumigatus
RepID=B0XXT9_ASPFC
Length = 422
Score = 77.8 bits (190), Expect = 6e-13
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402
A C++IACRQ PRT EI +V T+KEIGR + + K + + + G
Sbjct: 242 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTAQNLERINAVVSSGGV 300
Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
D RFC+ L++ +Q + + RSP+SI AA
Sbjct: 301 PDPNDTYTATTSTKPSDLCNRFCNLLDLPYQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 360
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
IY+ + L K K+IS V++GTIR +YK LY ++I P W + D+KNL
Sbjct: 361 CIYMASYLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDMKNL 419
[191][TOP]
>UniRef100_A3LYP5 Predicted protein n=1 Tax=Pichia stipitis RepID=A3LYP5_PICST
Length = 350
Score = 77.8 bits (190), Expect = 6e-13
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 13/161 (8%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG----------QS 429
AA ++I CR+ R+ KEI ++ N +KEIG+ + I K + + +
Sbjct: 177 AAAIFIGCRKAKVARSFKEIWALTN-VPRKEIGKVFKIIDKVIQEKNAANPNALMFNQDN 235
Query: 428 VEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ 255
++ A D +RR CS+L +N Q A+ ++ +E + RSP +IAA +IY+
Sbjct: 236 MQTTQTTAEDLIRRNCSHLGLNAQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAAL 295
Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
+ P IS TGV++GTI+ SYK +Y K+I P W
Sbjct: 296 VFGIDLPPSKISDKTGVSDGTIKTSYKVMYEEKEKLIDPYW 336
[192][TOP]
>UniRef100_A1D706 Transcription initiation protein n=1 Tax=Neosartorya fischeri NRRL
181 RepID=A1D706_NEOFI
Length = 350
Score = 77.8 bits (190), Expect = 6e-13
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402
A C++IACRQ PRT EI +V T+KEIGR + + K + + + G
Sbjct: 170 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTAQNLERINAVVSSGGV 228
Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
D RFC+ L++ +Q + + RSP+SI AA
Sbjct: 229 PDPNDTYTATTSTKPSDLCNRFCNLLDLPYQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 288
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
IY+ + L K K+IS V++GTIR +YK LY ++I P W + D+KNL
Sbjct: 289 CIYMASYLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDMKNL 347
[193][TOP]
>UniRef100_A1CKG6 Transcription initiation protein n=1 Tax=Aspergillus clavatus
RepID=A1CKG6_ASPCL
Length = 350
Score = 77.8 bits (190), Expect = 6e-13
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402
A C++IACRQ PRT EI +V T+KEIGR + + K + + + G
Sbjct: 170 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTAQNLERINAVVSSGGV 228
Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
D RFC+ L++ +Q + + RSP+SI AA
Sbjct: 229 PDPNDTYTATTSTKPSDLCNRFCNLLDLPYQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 288
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
IY+ + L K K+IS V++GTIR +YK LY ++I P W + D+KNL
Sbjct: 289 CIYMASYLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDMKNL 347
[194][TOP]
>UniRef100_C5A415 Transcription initiation factor TFIIB (Tfb) n=1 Tax=Thermococcus
gammatolerans EJ3 RepID=C5A415_THEGJ
Length = 303
Score = 77.8 bits (190), Expect = 6e-13
Identities = 48/148 (32%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+A LY ACR E PRT+ EI V+ TKKEIGR+ ++ + LGL + + D
Sbjct: 162 SAALYAACRMEGIPRTLDEIARVSK-VTKKEIGRSYRFMARGLGLNLRPTSPI------D 214
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF L ++ + + A+E +++A + I + P +AAA +Y+ + L +KK ++
Sbjct: 215 YVDRFGDALGVSSKTKQRAKEILQEAIKRGITSGKGPTGLAAAALYVASLLEGEKKTQRE 274
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
++ V E T+RN YK+L ++ +P
Sbjct: 275 VAEVAHVTEVTVRNRYKELVEKLNIKVP 302
[195][TOP]
>UniRef100_Q3SBA6 Archaeal transcriptional initiation factor TFB n=1 Tax=uncultured
euryarchaeote Alv-FOS5 RepID=Q3SBA6_9EURY
Length = 474
Score = 77.8 bits (190), Expect = 6e-13
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y+ CRQ PRT+ EI V+ G TKKEIGR ++ K+L V++ +
Sbjct: 332 AAVIYMICRQYGIPRTLDEISEVS-GITKKEIGRTYRFLKKEL------YVDVPLTNPIY 384
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L ++ + + A+E + +A E + R P +AAA +YI + + +++ K+
Sbjct: 385 YVPRFASALGLSGKVQEKAKEILNEAVEKGLISGRGPTGVAAAAVYIASVMMGERRTQKE 444
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN Y++L
Sbjct: 445 VAEVAGVTEVTIRNRYREL 463
[196][TOP]
>UniRef100_B7R0Z5 Transcription initiation factor iib (Tfiib) n=1 Tax=Thermococcus
sp. AM4 RepID=B7R0Z5_9EURY
Length = 303
Score = 77.8 bits (190), Expect = 6e-13
Identities = 48/148 (32%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+A LY ACR E PRT+ EI V+ TKKEIGR+ ++ + LGL + + D
Sbjct: 162 SAALYAACRMEGIPRTLDEIARVSK-VTKKEIGRSYRFMARGLGLNLRPTSPI------D 214
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF L ++ + + A+E +++A + I + P +AAA +Y+ + L +KK ++
Sbjct: 215 YVDRFGDALGVSSKTKQRAKEILQEAIKRGITSGKGPTGLAAAALYVASLLEGEKKTQRE 274
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
++ V E T+RN YK+L ++ +P
Sbjct: 275 VAEVAHVTEVTVRNRYKELVEKLNIKVP 302
[197][TOP]
>UniRef100_B8N1Q4 Transcription initiation protein n=2 Tax=Aspergillus
RepID=B8N1Q4_ASPFN
Length = 350
Score = 77.4 bits (189), Expect = 7e-13
Identities = 60/179 (33%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
A C++IACRQ PRT EI +V ++KEIGR A E LE+ +V
Sbjct: 170 AGCIFIACRQCKVPRTFTEIFAVTK-VSRKEIGRIYKALEKFFTAQNLERNNAVVSNGGV 228
Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
+ D RFC+ L++ Q + + RSP+SI AA
Sbjct: 229 PDPNDTYTATTSTKPSDLCNRFCNLLDLPFQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 288
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
IY+ + L K K+IS V++GTIR +YK LY ++I P W + DLKNL
Sbjct: 289 CIYMASYLMGHGKTAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDLKNL 347
[198][TOP]
>UniRef100_A2QD90 Complex: TFIIB binds directly to TBP n=1 Tax=Aspergillus niger CBS
513.88 RepID=A2QD90_ASPNC
Length = 351
Score = 77.4 bits (189), Expect = 7e-13
Identities = 58/179 (32%), Positives = 82/179 (45%), Gaps = 21/179 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402
A C++IACRQ PRT EI +V T+KEIGR + + K + + + G
Sbjct: 171 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTAQNLERINAVVSSGGV 229
Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
D RFC+ L++ Q + + RSP+SI AA
Sbjct: 230 PDPNDTYTATTSTKPSDLCNRFCNLLDLPFQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 289
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
IY+ + L K K+IS V++GTIR +YK LY ++I P W + DLKNL
Sbjct: 290 CIYMASYLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDLKNL 348
[199][TOP]
>UniRef100_Q5V5V1 Transcription initiation factor IIB n=1 Tax=Haloarcula marismortui
RepID=Q5V5V1_HALMA
Length = 319
Score = 77.4 bits (189), Expect = 7e-13
Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
ACLY ACRQE PR+++E+ V+ +KEIGR Y+ ++L L+ M + +
Sbjct: 182 ACLYAACRQEGIPRSLEEVSDVSR-VEQKEIGRTYRYVAQELELK------MEPVDPKQY 234
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RF S L ++ + A E + E + +SP AAA IY + L ++KK +++
Sbjct: 235 VPRFASELELSEEVQSKANEIIDTTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 294
Query: 221 SIATGVAEGTIRNSYKD 171
+ V E TIRN Y++
Sbjct: 295 ADVAQVTEVTIRNRYQE 311
[200][TOP]
>UniRef100_B9LS68 Transcription factor TFIIB cyclin-related n=1 Tax=Halorubrum
lacusprofundi ATCC 49239 RepID=B9LS68_HALLT
Length = 333
Score = 77.4 bits (189), Expect = 7e-13
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A LY ACR+E PR+++EI V+ +KEIGR YI ++LGLE M + +
Sbjct: 195 AALYAACRKEGIPRSLEEISDVSR-VERKEIGRTYRYISQELGLE------MRPVDPKKY 247
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RF S L ++ + A E ++ E + +SP AAA IY + L ++KK +++
Sbjct: 248 VPRFSSELELSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 307
Query: 221 SIATGVAEGTIRNSYKD 171
+ V E TIRN Y++
Sbjct: 308 ADVAQVTEVTIRNRYQE 324
[201][TOP]
>UniRef100_B9HEV3 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9HEV3_POPTR
Length = 278
Score = 77.0 bits (188), Expect = 1e-12
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A L A R+ +PRT++EI S+A +KEIG+ + + + L L + + ++H
Sbjct: 110 AALVQAIREAQEPRTLQEI-SIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH---- 164
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K
Sbjct: 165 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 220
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
+I TG+ E T+R YK+L + ++P Y
Sbjct: 221 QAEICKVTGLTEVTLRKVYKELLENWGDLLPKNY 254
[202][TOP]
>UniRef100_B6AAS1 Transcription initiation factor IIB, putative n=1
Tax=Cryptosporidium muris RN66 RepID=B6AAS1_9CRYT
Length = 431
Score = 77.0 bits (188), Expect = 1e-12
Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 2/147 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A +YIACR+E RTVKE+ + +++E RA + K L KG ++ A +
Sbjct: 268 AIVYIACREEGVSRTVKELLTYDRSVSEREFVRAINKLKKDLP-RKGPTLSSS---AAEL 323
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRS--PISIAAAIIYIITQLSDDKKPLKDI 222
M RFC L ++H+ V A+ + AE++ I +S P S+AA IY ++ L + + +K +
Sbjct: 324 MPRFCHYLQLSHEIVGVAEYVCRTAEQY-INKSHRPNSLAAGAIYFVSNLCNIQIDMKSV 382
Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIP 141
++A E T+R Y++L +K++P
Sbjct: 383 AVAAKSGETTVRGVYRELLLIGNKLLP 409
[203][TOP]
>UniRef100_C7YH08 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YH08_NECH7
Length = 347
Score = 77.0 bits (188), Expect = 1e-12
Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 15/160 (9%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ----------- 432
A C++IACRQ + PRT +EI ++ + +KKE+GR + + L +GQ
Sbjct: 170 AGCIFIACRQNNVPRTFREIFNLTS-VSKKEVGRVFKQLQSFLQKLQGQDGEATGLNAVT 228
Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAV--KAAQEAVKKAEEFDIR--RSPISIAAAIIYI 264
+ E ++ A D R+ S L +Q K +++ ++A E RSP+S+AAA IY+
Sbjct: 229 NYENTSVGAEDLCGRYVSQLGFKNQQKISKISRDLAEQANEISALAGRSPLSVAAACIYM 288
Query: 263 ITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144
L + +P I+ GV++GT++ +YK L+ ++I
Sbjct: 289 ACHLVGEPRPSLPIAKQAGVSDGTVKTAYKHLFAAREQLI 328
[204][TOP]
>UniRef100_B6HCF2 Pc18g01520 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6HCF2_PENCW
Length = 350
Score = 77.0 bits (188), Expect = 1e-12
Identities = 56/168 (33%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSVEMGTI 411
A C++IACRQ PRT EI +V T+KEIGR +++ Q ++E G
Sbjct: 170 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTTQNVERHNAALENGET 228
Query: 410 H--AGDF-----------MRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
H AGD+ RFC+ L++ +Q + + RSP+SI AA
Sbjct: 229 HDFAGDYNATTSTKPSDLCNRFCNLLDLPYQVTSVSVSLSDRVTAMGDLAGRSPLSIVAA 288
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
IY+ + L K K+IS V++GTIR +YK LY +++ P W
Sbjct: 289 CIYMASFLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLVDPEW 336
[205][TOP]
>UniRef100_Q18J17 Transcription initiation factor TFB n=1 Tax=Haloquadratum walsbyi
DSM 16790 RepID=Q18J17_HALWD
Length = 317
Score = 77.0 bits (188), Expect = 1e-12
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
+ LY ACRQE PR++ E+ V+ +KEIGR YI ++LGLE + + F
Sbjct: 180 SALYAACRQEGIPRSLDEVAEVSR-VPQKEIGRTYRYISQELGLE------LRPVDPKQF 232
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RF S+L+++ + A E + + E + +SP AAA IY + L ++KK +++
Sbjct: 233 VPRFSSSLHLSEEVQSKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREV 292
Query: 221 SIATGVAEGTIRNSYKD 171
+ V E TIRN Y++
Sbjct: 293 ADVAQVTEVTIRNRYQE 309
[206][TOP]
>UniRef100_B9LNZ5 Transcription factor TFIIB cyclin-related n=1 Tax=Halorubrum
lacusprofundi ATCC 49239 RepID=B9LNZ5_HALLT
Length = 317
Score = 77.0 bits (188), Expect = 1e-12
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A LY ACRQE PR++ E+ V+ +KEIGR YI ++LGLE + + F
Sbjct: 180 AALYAACRQEGIPRSLDEVADVSR-VPQKEIGRTYRYISQELGLE------LKPVDPKQF 232
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RF S L ++ + A E + + E + +SP AAA IY + L ++KK +++
Sbjct: 233 VPRFASALQLSEEVQSKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREV 292
Query: 221 SIATGVAEGTIRNSYKD 171
+ V E TIRN Y++
Sbjct: 293 ADVAQVTEVTIRNRYQE 309
[207][TOP]
>UniRef100_Q9HJM2 Transcription initiation factor IIB 2 n=1 Tax=Thermoplasma
acidophilum RepID=TF2B2_THEAC
Length = 307
Score = 77.0 bits (188), Expect = 1e-12
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A +Y ACR+ + PRT+ EI S A+ KK+IG+A ++ K+L L + +
Sbjct: 167 ASIYAACRKVNIPRTLDEI-SKASEVNKKKIGKAYRHLAKELDLNLKPTTPFS------Y 219
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ +FC+ L+++ QA+ +++ V++A I + P IAAA IYI + + K+I
Sbjct: 220 ISQFCNKLDLDKQAIVISEDIVRQAMSMGISSGKGPTGIAAAAIYIASVKVGKPRTQKEI 279
Query: 221 SIATGVAEGTIRNSYKDL 168
+ +GV E TIRN YK++
Sbjct: 280 ARISGVTEVTIRNRYKEI 297
[208][TOP]
>UniRef100_P58109 Transcription initiation factor IIB 2 n=1 Tax=Thermococcus
kodakarensis RepID=TF2B2_PYRKO
Length = 306
Score = 77.0 bits (188), Expect = 1e-12
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
+A LY ACR E PRT+ EI SV+ +KKEIGR+ ++ + LGL + + +
Sbjct: 165 SAALYAACRMEGIPRTLDEIASVSK-VSKKEIGRSYRFMARGLGLNLRPTSPI------E 217
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF L ++ + K A+E + +A + I + P +AAA +YI L +KK ++
Sbjct: 218 YVDRFGDALGVSARTKKRAKEILNEAIKRGITSGKGPTGLAAAALYIAALLEGEKKTQRE 277
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
++ V E T+RN YK+L + +P
Sbjct: 278 VAEVAHVTEVTVRNRYKELVEKLGINVP 305
[209][TOP]
>UniRef100_Q979Q3 Transcription initiation factor IIB 1 n=1 Tax=Thermoplasma
volcanium RepID=TF2B1_THEVO
Length = 312
Score = 77.0 bits (188), Expect = 1e-12
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
A LY ACR + PRT+ EI SV KKEIGR + + L L S A D
Sbjct: 171 AGALYAACRITNVPRTLGEIASVTR-VKKKEIGRTYRIMSRYLKLNIMPS------KAED 223
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS L ++ A E ++ AE + + P +AAA IYI + ++ +++ +
Sbjct: 224 YISRFCSKLKLSMDTRNKALEILRDAENVGLTSGKGPTGVAAAAIYIASLITGERRTQRA 283
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 284 VAEVAGVTEVTIRNRYKEL 302
[210][TOP]
>UniRef100_Q9HJM7 Transcription initiation factor IIB 1 n=1 Tax=Thermoplasma
acidophilum RepID=TF2B1_THEAC
Length = 312
Score = 77.0 bits (188), Expect = 1e-12
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
A LY ACR + PRT+ EI SV KKEIGR + + L L S A D
Sbjct: 171 AGALYAACRITNVPRTLGEIASVTR-VKKKEIGRTYRIMSRYLKLNIMPS------KAED 223
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RFCS L ++ A E ++ AE + + P +AAA IYI + ++ +++ +
Sbjct: 224 YISRFCSKLKLSMDTRNKALEILRSAENAGLTSGKGPTGVAAAAIYIASLMTGERRTQRA 283
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ GV E TIRN YK+L
Sbjct: 284 VAEVAGVTEVTIRNRYKEL 302
[211][TOP]
>UniRef100_Q59M46 Likely transcription factor TFIIB n=1 Tax=Candida albicans
RepID=Q59M46_CANAL
Length = 176
Score = 76.6 bits (187), Expect = 1e-12
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 13/166 (7%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATK---KEIGRAKEYIVKQLGLEKG------QSV 426
AA + + CR+ D RT++EI ++ N ATK K G K+ I L + ++
Sbjct: 2 AATILLGCRRADVGRTLEEIRALTNVATKQIAKVTGLIKKIIRSHLNNDDASTSIVDETS 61
Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ- 255
+ T A D +RRFCS+L ++ A++ +K + + RSP +IAA I++ +
Sbjct: 62 SLTTHSAEDLIRRFCSHLGLSLAITSASEYVARKCHDLGVLAGRSPTTIAATSIFLAAKS 121
Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEE 120
L D K + I TGV+ GTI+NSYK L + +I P W A +
Sbjct: 122 LGDTKLTQQQIRDKTGVSIGTIKNSYKILQENAKDLIDPAWEANSK 167
[212][TOP]
>UniRef100_C4JYZ7 Transcription initiation factor IIB n=1 Tax=Uncinocarpus reesii
1704 RepID=C4JYZ7_UNCRE
Length = 353
Score = 76.6 bits (187), Expect = 1e-12
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402
A C++IACRQ PRT EI ++ +KKEIGR + + K + + + G
Sbjct: 173 AGCIFIACRQCKVPRTFTEIFALTR-VSKKEIGRIYKTLEKFFTAQNMERINSVVSSGGV 231
Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
D RFC+ L++ Q + + RSP+SI AA
Sbjct: 232 PDPNETYTATTSTKPSDLCSRFCNLLDLPFQVTTVSSALADRVTSMGDLAGRSPLSIVAA 291
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
IY+ + L K K+IS V++GTIR +YK LY ++I P+W + D+KNL
Sbjct: 292 SIYMASFLMGQGKSAKEISAVAHVSDGTIRGAYKQLYAERERLIHPSWIKDGKGDMKNL 350
[213][TOP]
>UniRef100_Q3ISF4 Transcription initiation factor TFB 1 n=1 Tax=Natronomonas
pharaonis DSM 2160 RepID=Q3ISF4_NATPD
Length = 322
Score = 76.6 bits (187), Expect = 1e-12
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL--GLEKGQSVEMGTIHAG 402
A LY ACRQE PR++ E+ VA +KEIGR YI ++L GLE V+
Sbjct: 185 AALYAACRQEGIPRSLDEVADVAR-VEQKEIGRTYRYIAQELSLGLEPVDPVQ------- 236
Query: 401 DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLK 228
++ RFCS L ++ + + +E ++ E + +SP AAA IY + L ++KK +
Sbjct: 237 -YVPRFCSELGLSEEVEQKTREIIEVTAEKGMLSGKSPTGYAAAAIYAASLLCNEKKTQR 295
Query: 227 DISIATGVAEGTIRNSYKD 171
+++ V E TIRN Y++
Sbjct: 296 EVAEVAQVTEVTIRNRYQE 314
[214][TOP]
>UniRef100_B6YWX5 Transcription initiation factor IIB n=1 Tax=Thermococcus onnurineus
NA1 RepID=B6YWX5_THEON
Length = 299
Score = 76.6 bits (187), Expect = 1e-12
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AAC+Y ACR PRT+ EI ++ KKEIGR+ +I + L L + T D
Sbjct: 156 AACVYAACRLLKVPRTLDEIADISR-VDKKEIGRSFRFIARNLNLTPKKLFVKPT----D 210
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ +F L ++ + + A +++A E + +SP + AA +YI L D+K+ ++
Sbjct: 211 YVNKFADELGLSEKVRRRAIAILEEAYEKGLTSGKSPAGLVAAALYIAGLLEDEKRTQRE 270
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
++ V E T+RN YK+L ++ IP
Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLNLKIP 298
[215][TOP]
>UniRef100_C7NY62 Transcription factor TFIIB cyclin-related n=1 Tax=Halomicrobium
mukohataei DSM 12286 RepID=C7NY62_HALMD
Length = 324
Score = 76.6 bits (187), Expect = 1e-12
Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
+ LY A RQ + PR++ E+ V+ + E+ R YI+++LGLE + +
Sbjct: 186 SALYAAARQANNPRSLDEMTHVSR-VERMELTRTYRYIIRELGLE------VAPAKPESY 238
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RFCS L+++ + + A+E ++ A + I +SP+ IAAA +Y L+++K ++
Sbjct: 239 VPRFCSELSLSDETERRARELIEAARDGGILSGKSPVGIAAAAVYAAALLTNEKVTQSEV 298
Query: 221 SIATGVAEGTIRNSYKDL 168
S ++E TIRN YK+L
Sbjct: 299 SGVADISEVTIRNRYKEL 316
[216][TOP]
>UniRef100_A8TD60 Transcription factor TFIIB cyclin-related n=1 Tax=Methanococcus
voltae A3 RepID=A8TD60_METVO
Length = 337
Score = 76.6 bits (187), Expect = 1e-12
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACR+ PRT+ EI V+ +KEIGR +I ++L ++ + + D
Sbjct: 196 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 248
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L + + A +K A + + R P +AAA IYI + L ++ ++
Sbjct: 249 YVPRFASELKLPGEVESKAISILKDAGKKGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 308
Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
++ GV E TIRN YK+L H+
Sbjct: 309 VADVAGVTEVTIRNRYKELTEHL 331
[217][TOP]
>UniRef100_Q9HSB3 Transcription initiation factor IIB 6 n=2 Tax=Halobacterium
salinarum RepID=TF2B6_HALSA
Length = 319
Score = 76.6 bits (187), Expect = 1e-12
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
+C+Y A RQ PR++ EI V+ K EI R Y+V++LGLE + +
Sbjct: 180 SCVYAAARQAGVPRSLDEIADVSR-VEKAEIARTYRYVVRELGLE------VAPADPESY 232
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RF S+L ++ +A A+E +K A++ + +SP+ +AAA +Y L+++K +
Sbjct: 233 VPRFASDLGLSDEASHRARELLKTAKDKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAKV 292
Query: 221 SIATGVAEGTIRNSYKDL 168
S ++E TIRN Y +L
Sbjct: 293 SEVADISEVTIRNRYHEL 310
[218][TOP]
>UniRef100_C7P8F9 Transcription factor TFIIB cyclin-related n=1
Tax=Methanocaldococcus fervens AG86 RepID=C7P8F9_METFA
Length = 331
Score = 76.3 bits (186), Expect = 2e-12
Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y ACR+ PRT+ EI A+ +KEIGR ++ ++LG +++ + D
Sbjct: 190 AAAIYAACRRCRVPRTLDEIAE-ASRVDRKEIGRTYRFLARELG------IKLTPTNPID 242
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L + + A + +++A E + R P +AAA IYI + L ++ ++
Sbjct: 243 YVPRFASELGLPGEVESKAIQILQQAAEKGLTSGRGPTGVAAAAIYIASVLLGCRRTQRE 302
Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
++ GV E TIRN YK+L H+
Sbjct: 303 VAEVAGVTEVTIRNRYKELTEHL 325
[219][TOP]
>UniRef100_C1V5C9 Transcription initiation factor IIB (TFIIB) n=1 Tax=Halogeometricum
borinquense DSM 11551 RepID=C1V5C9_9EURY
Length = 327
Score = 76.3 bits (186), Expect = 2e-12
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
+ LY ACR+E PR+++EI V+ +KEIGR YI ++LGLE M + +
Sbjct: 189 SALYAACRKEGIPRSLEEISDVSR-VERKEIGRTYRYISQELGLE------MKPVDPKKY 241
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RF S L+++ + A E ++ E + +SP AAA IY + L ++KK +++
Sbjct: 242 VPRFSSELDLSKEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 301
Query: 221 SIATGVAEGTIRNSYKD 171
+ V E TIRN Y++
Sbjct: 302 ADVAQVTEVTIRNRYQE 318
[220][TOP]
>UniRef100_Q979P7 Transcription initiation factor IIB 2 n=1 Tax=Thermoplasma
volcanium RepID=TF2B2_THEVO
Length = 313
Score = 76.3 bits (186), Expect = 2e-12
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A +Y ACR+ + PRT+ EI A+ KK+IG+A ++ K+L L + +
Sbjct: 173 ASIYAACRKVNIPRTLDEIAK-ASEVNKKKIGKAYRHLAKELDLNLRPTTPFS------Y 225
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ +FC+ L+++ QA+ +++ V++A I + P IAAA IYI + + K+I
Sbjct: 226 IAQFCNKLDLDKQAIVISEDIVRQAMSMGISSGKGPTGIAAAAIYIASVKVGKPRTQKEI 285
Query: 221 SIATGVAEGTIRNSYKDL 168
+ +GV E TIRN YK++
Sbjct: 286 ARISGVTEVTIRNRYKEI 303
[221][TOP]
>UniRef100_Q3IN04 Transcription initiation factor TFB 6 n=1 Tax=Natronomonas
pharaonis DSM 2160 RepID=Q3IN04_NATPD
Length = 329
Score = 75.9 bits (185), Expect = 2e-12
Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A LY ACRQE PR++ E+ VA +KEIGR Y+ ++LGLE + ++
Sbjct: 192 ATLYAACRQESIPRSLDEVAEVAR-VEQKEIGRTYRYLSQELGLE------IKPADPKEY 244
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RFCS L ++ + +E + E + +SP AAA IY + L ++KK +++
Sbjct: 245 VPRFCSELALSEAVEQKTREIIDVTAEEGMLSGKSPTGYAAAAIYAASLLCNEKKTQREV 304
Query: 221 SIATGVAEGTIRNSYKD 171
+ V E TIRN Y++
Sbjct: 305 AEVAQVTEVTIRNRYQE 321
[222][TOP]
>UniRef100_C7NZL7 Transcription factor TFIIB cyclin-related n=1 Tax=Halomicrobium
mukohataei DSM 12286 RepID=C7NZL7_HALMD
Length = 317
Score = 75.9 bits (185), Expect = 2e-12
Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
+CLY ACRQE PR+++E+ V+ +KEIGR Y+ ++L L+ M + +
Sbjct: 180 SCLYAACRQEGIPRSLEEVSDVSR-VEQKEIGRTYRYVAQELKLK------MEPVDPKQY 232
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RF S L ++ + A E + E + +SP AAA IY + L ++KK +++
Sbjct: 233 VPRFASELELSEEVQSKANEIIDVTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 292
Query: 221 SIATGVAEGTIRNSYKD 171
+ V E TIRN Y++
Sbjct: 293 ADVAQVTEVTIRNRYQE 309
[223][TOP]
>UniRef100_P50387 Transcription initiation factor IIB n=1 Tax=Sulfolobus shibatae
RepID=TF2B_SULSH
Length = 309
Score = 75.9 bits (185), Expect = 2e-12
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y ACR+ RT+ EI A +KE+ R ++++L V + D
Sbjct: 167 AAAIYAACRRMKLARTLDEIAQYTK-ANRKEVARCYRLLLREL------DVSVPVSDPKD 219
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ R + L ++ + +K A E + KA+ + + P +AAA IYI + L D+++ K+
Sbjct: 220 YVTRIANLLGLSGRVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKE 279
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
I+ GV E T+RN YK+L + IPT
Sbjct: 280 IAQVAGVTEVTVRNRYKELTQELKISIPT 308
[224][TOP]
>UniRef100_Q9V0V5 Transcription initiation factor IIB n=1 Tax=Pyrococcus abyssi
RepID=TF2B_PYRAB
Length = 300
Score = 75.9 bits (185), Expect = 2e-12
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AAC+Y ACR PRT+ EI +A KKEIGR+ +I + L L + T D
Sbjct: 156 AACVYAACRLLKVPRTLDEISDIAR-VEKKEIGRSYRFIARNLNLTPKKLFVKPT----D 210
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ +F L ++ + + A E +++A + + +SP + AA +YI + L +K+ ++
Sbjct: 211 YVNKFADELGLSEKVRRRAIEILEEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQRE 270
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
++ V E T+RN YK+L + +P
Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLGIKVP 298
[225][TOP]
>UniRef100_Q9P9I7 Transcription initiation factor IIB n=1 Tax=Methanothermococcus
thermolithotrophicus RepID=TF2B_METTL
Length = 339
Score = 75.9 bits (185), Expect = 2e-12
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACR+ PRT+ EI + +KEIGR +I ++L ++ + + D
Sbjct: 198 AAALYAACRRCKVPRTLDEIAE-GSRVDRKEIGRTYRFISREL------NIRLTPTNPID 250
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L + + A ++KA E + R P +AAA IYI + L ++ ++
Sbjct: 251 YVPRFASELKLPGEVESKAISILQKANEKGLTSGRGPTGVAAAAIYIASVLHGTRRTQRE 310
Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
++ GV E TIRN YK+L H+
Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333
[226][TOP]
>UniRef100_A6UW60 Transcription initiation factor IIB n=1 Tax=Methanococcus aeolicus
Nankai-3 RepID=TF2B_META3
Length = 334
Score = 75.9 bits (185), Expect = 2e-12
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY ACR+ PRT+ EI ++ +KEIGR +I ++L + + D
Sbjct: 193 AAALYAACRRCKVPRTLDEIAEMSR-VDRKEIGRTYRFISREL------KIRLAPTSPID 245
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L + + A ++KA + + R P +AAA IYI + L +K ++
Sbjct: 246 YVPRFASELKLPGEVESKAISILQKAGDKGLTSGRGPTGVAAAAIYIASVLHGTRKTQRE 305
Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
++ GV E TIRN YK+L H+
Sbjct: 306 VADVAGVTEVTIRNRYKELTEHL 328
[227][TOP]
>UniRef100_C1V8T9 Transcription initiation factor IIB (TFIIB) n=1 Tax=Halogeometricum
borinquense DSM 11551 RepID=C1V8T9_9EURY
Length = 317
Score = 75.5 bits (184), Expect = 3e-12
Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
+ LY ACRQE PR++ E+ V+ +KEIGR YI ++LGLE + + F
Sbjct: 180 SALYAACRQEGIPRSLDEVAEVSR-VPQKEIGRTYRYISQELGLE------LKPVDPKQF 232
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RF S L ++ + A E + + E + +SP AAA IY + L ++KK +++
Sbjct: 233 VPRFASALGLSEEVQAKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREV 292
Query: 221 SIATGVAEGTIRNSYKD 171
+ V E TIRN Y++
Sbjct: 293 ADVAQVTEVTIRNRYQE 309
[228][TOP]
>UniRef100_O59151 Transcription initiation factor IIB n=1 Tax=Pyrococcus horikoshii
RepID=TF2B_PYRHO
Length = 300
Score = 75.5 bits (184), Expect = 3e-12
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AAC+Y ACR PRT+ EI +A KKEIGR+ +I + L L + T D
Sbjct: 156 AACVYAACRLLKVPRTLDEISDIAR-VEKKEIGRSYRFIARNLNLTPKKLFVKPT----D 210
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ +F L ++ + + A E +++A + +SP + AA +YI + L +K+ ++
Sbjct: 211 YVNKFADELGLSEKVRRRAIEILEEAYRRGLTSGKSPAGLVAAALYIASLLEGEKRTQRE 270
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
++ V E T+RN YK+L + +P
Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLGIKVP 298
[229][TOP]
>UniRef100_P61998 Transcription initiation factor IIB n=2 Tax=Pyrococcus
RepID=TF2B_PYRFU
Length = 300
Score = 75.5 bits (184), Expect = 3e-12
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AAC+Y ACR PRT+ EI +A KKEIGR+ +I + L L + T D
Sbjct: 156 AACVYAACRLLKVPRTLDEIADIAR-VDKKEIGRSYRFIARNLNLTPKKLFVKPT----D 210
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ +F L ++ + + A E + +A + + +SP + AA +YI + L +K+ ++
Sbjct: 211 YVNKFADELGLSEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQRE 270
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
++ V E T+RN YK+L + +P
Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLKIKVP 298
[230][TOP]
>UniRef100_Q5JGN1 Transcription initiation factor IIB 1 n=1 Tax=Thermococcus
kodakarensis RepID=TF2B1_PYRKO
Length = 300
Score = 75.5 bits (184), Expect = 3e-12
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AAC+Y ACR PRT+ EI V+ KKEIGR+ +I + L L + T D
Sbjct: 156 AACVYAACRLLKVPRTLDEIADVSR-VDKKEIGRSFRFIARHLNLTPKKLFVKPT----D 210
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ +F L ++ + + A E +++A + + +SP + AA +YI + + +K+ ++
Sbjct: 211 YVNKFADELGLSEKVRRRAIEILEEAYQRGLTSGKSPAGLVAAALYIASLMEGEKRTQRE 270
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
++ V E T+RN YK+L ++ +P
Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLNLKVP 298
[231][TOP]
>UniRef100_UPI00003C83D7 transcription initiation factor IIB n=1 Tax=Ferroplasma acidarmanus
fer1 RepID=UPI00003C83D7
Length = 305
Score = 75.1 bits (183), Expect = 4e-12
Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A +Y +CR + PRT+ EI V+ KK+IG+A ++ K+L L + +
Sbjct: 165 ASIYASCRMINIPRTLDEISKVSE-VNKKKIGKAYRHLAKELALNLQPTTPYS------Y 217
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ +FC+ L+++ Q + ++ ++ A E + + P IAAA IYI + ++ KD+
Sbjct: 218 VSQFCNKLDLDKQVIMDSEHIIRLAGESGLSTGKGPTGIAAAAIYIAAMKNGKQRTQKDV 277
Query: 221 SIATGVAEGTIRNSYKDL 168
+ +GV E TIRN YK++
Sbjct: 278 ARVSGVTEVTIRNRYKEI 295
[232][TOP]
>UniRef100_Q98S45 Transcription initiation factor IIB n=1 Tax=Guillardia theta
RepID=Q98S45_GUITH
Length = 325
Score = 75.1 bits (183), Expect = 4e-12
Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 5/150 (3%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA ++I C+ E PR+ KEI + KK+IG + K L + +++ D
Sbjct: 160 AASIFIICKNESIPRSFKEISELTK-VKKKDIGNRVRIMEKAL-----EGIKISKKRDSD 213
Query: 398 -FMRRFCSNLNMNHQAVKAAQEAVK--KAEEFDIRRSPISIAAAIIYIITQLSD--DKKP 234
F+ RFCS L ++ + K A++ K +E R+ IS+AAA IY+++Q+ + +
Sbjct: 214 NFISRFCSKLGLSSTSSKIAEQIANFIKDKEGMYGRNYISVAAASIYVVSQIPNLSNNCN 273
Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKII 144
LK I ATGV+E T+R++YK +YP+ +I+
Sbjct: 274 LKKIIEATGVSEITLRSAYKAMYPYRKEIL 303
[233][TOP]
>UniRef100_C3MQW9 Transcription factor TFIIB cyclin-related n=5 Tax=Sulfolobus
islandicus RepID=C3MQW9_SULIL
Length = 309
Score = 75.1 bits (183), Expect = 4e-12
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y ACR+ RT+ EI A +KE+ R ++++L V + D
Sbjct: 167 AAAIYAACRRMKLARTLDEIAQYTK-ANRKEVARCYRLLLREL------DVSVPVSDPKD 219
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ R + L ++ +K A E + KA+ + + P +AAA IYI + L D+++ K+
Sbjct: 220 YVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKE 279
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
I+ GV E T+RN YK+L + IPT
Sbjct: 280 IAQVAGVTEVTVRNRYKELTQELKISIPT 308
[234][TOP]
>UniRef100_B8D3B4 Transcription initiation factor IIB (TFIIB) n=1 Tax=Desulfurococcus
kamchatkensis 1221n RepID=B8D3B4_DESK1
Length = 319
Score = 75.1 bits (183), Expect = 4e-12
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y+ACR+ PR++ EI +KEI R ++++L +++ T D
Sbjct: 179 AATIYLACREMKVPRSLDEITRHTR-VNRKEIARCYRLLLREL------HIKVTTTDPVD 231
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ R L + QAVK A E + KA+E + + P +AAA +YI + +K+ K+
Sbjct: 232 YVPRIVHGLGLPGQAVKIAIEIINKAKEQGVTGGKDPAGLAAAAVYIAAEQLGEKRTQKE 291
Query: 224 ISIATGVAEGTIRNSYKDL 168
I+ GV E T+RN YK+L
Sbjct: 292 IAHVAGVTEVTVRNRYKEL 310
[235][TOP]
>UniRef100_Q9UWN6 Transcription initiation factor IIB n=1 Tax=Sulfolobus
acidocaldarius RepID=TF2B_SULAC
Length = 307
Score = 75.1 bits (183), Expect = 4e-12
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y ACR+ RT+ EI A +KE+ R I+++L +E+ D
Sbjct: 165 AASIYAACRRMKMARTLDEIAQFTK-ANRKEVARCYRLILREL------DIEVPVSDPKD 217
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ R + L+++ +K A E ++KA+ + + P +AAA IYI L+D+++ K+
Sbjct: 218 YVTRIGTLLSLSGITMKHAAEIIEKAKNSGLTAGKDPAGLAAAAIYIAALLNDERRTQKE 277
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
I+ GV E T+RN YK+L + IP+
Sbjct: 278 IAQVAGVTEVTVRNRYKELTQELKIQIPS 306
[236][TOP]
>UniRef100_P58111 Transcription initiation factor IIB 1 n=2 Tax=Sulfolobus
solfataricus RepID=TF2B1_SULSO
Length = 309
Score = 75.1 bits (183), Expect = 4e-12
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y ACR+ RT+ EI A +KE+ R ++++L V + D
Sbjct: 167 AAAIYAACRRMKLARTLDEIAQYTK-ANRKEVARCYRLLLREL------DVSVPVSDPKD 219
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ R + L ++ +K A E + KA+ + + P +AAA IYI + L D+++ K+
Sbjct: 220 YVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKE 279
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
I+ GV E T+RN YK+L + IPT
Sbjct: 280 IAQVAGVTEVTVRNRYKELTQELKISIPT 308
[237][TOP]
>UniRef100_Q5CWC3 Transcription initiation factor TFIIB Sua7p; ZnR+2cyclins n=1
Tax=Cryptosporidium parvum Iowa II RepID=Q5CWC3_CRYPV
Length = 456
Score = 74.7 bits (182), Expect = 5e-12
Identities = 47/148 (31%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A +Y+ACR+E RTVKE+ S +++E+ R+ + K L +G ++ A +
Sbjct: 293 AIVYLACREEGVSRTVKELLSFDRTISERELVRSINKLKKDLP-RRGPTLSSS---AAEL 348
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRS--PISIAAAIIYIITQLSDDKKPLKDI 222
M RFC L ++H+ V A+ + AE++ I +S P S+AA IY + L + + +K +
Sbjct: 349 MPRFCHYLQLSHEIVGIAEYVCRTAEQY-INKSHRPNSLAAGAIYFVCNLCNIQIEMKSV 407
Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIPT 138
++A E T+R YK+L K++P+
Sbjct: 408 AVAAKSGETTVRGVYKELLLVGEKLLPS 435
[238][TOP]
>UniRef100_B9ZB69 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii
ATCC 43099 RepID=B9ZB69_NATMA
Length = 326
Score = 74.7 bits (182), Expect = 5e-12
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
AC+Y A RQ PR++ EI V+ K EI R Y+V++LGLE + +
Sbjct: 186 ACVYAAARQAGVPRSLDEIADVSR-VEKNEIARTYRYVVRELGLE------VQPADPESY 238
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RF S L+++ +A A+ ++ A+E + +SP+ +AAA +Y L+++K +
Sbjct: 239 VPRFASGLDLSDEAEHRARALLQNAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAV 298
Query: 221 SIATGVAEGTIRNSYKDL 168
S ++E TIRN Y +L
Sbjct: 299 SDVADISEVTIRNRYHEL 316
[239][TOP]
>UniRef100_Q975S1 Transcription initiation factor IIB n=1 Tax=Sulfolobus tokodaii
RepID=TF2B_SULTO
Length = 308
Score = 74.7 bits (182), Expect = 5e-12
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y ACR+ RT+ EI A +KE+ R I+++L + + D
Sbjct: 166 AASIYAACRRMKMARTLDEIAQFTK-ANRKEVARCYRLILREL------DINVPVSDPKD 218
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ R S L ++ +K A + ++KA+E + + P +AAA IYI L+D+++ K+
Sbjct: 219 YVTRIGSLLGLSGSTMKMAIDIIEKAKESGLTAGKDPAGLAAAAIYIAALLNDERRTQKE 278
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
I+ GV E T+RN YK+L + IP
Sbjct: 279 IAQIAGVTEVTVRNRYKELTQELKIQIP 306
[240][TOP]
>UniRef100_C5FDC5 Transcription initiation factor IIB n=1 Tax=Microsporum canis CBS
113480 RepID=C5FDC5_NANOT
Length = 352
Score = 74.3 bits (181), Expect = 6e-12
Identities = 57/168 (33%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
A C++IACRQ PRT EI +V +KKEIGR A E LE+ SV
Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VSKKEIGRIYKALEKFFTAQNLERINSVVSNGGV 230
Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
+ D RFC+ L++ Q + + RSP+SI AA
Sbjct: 231 PDPNDAYTGTTSTKPSDLCNRFCNLLDLPFQVTNVSSMLADRVTSMGDLAGRSPLSIVAA 290
Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
IY+ + L K K+IS V++GTIR +YK LY ++I P W
Sbjct: 291 SIYMASFLMGHGKTAKEISGVAHVSDGTIRGAYKQLYAERERLIDPAW 338
[241][TOP]
>UniRef100_A5DBP0 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DBP0_PICGU
Length = 339
Score = 74.3 bits (181), Expect = 6e-12
Identities = 50/160 (31%), Positives = 91/160 (56%), Gaps = 12/160 (7%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEM------- 420
AA + + CR+ + R+ EI ++ N KKE+GR + +++ L + + ++
Sbjct: 173 AASICLGCRKANVGRSFLEIAALTN-VPKKELGRVFKTMIQLLQEKHSNNPDVMHMTQQP 231
Query: 419 -GTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLS 249
+ A D +RRFCS+L ++ Q AA+ ++ ++ I RSPI++AA +IY+ + +
Sbjct: 232 VSSTSAEDLIRRFCSHLGLSTQISNAAEYIARRCKDEQILSGRSPITVAATVIYMASLIF 291
Query: 248 D-DKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
+ D P + I+ GV++GTI+ SYK L+ KI+ P+W
Sbjct: 292 NVDVSPAR-IADKAGVSDGTIKTSYKVLFEEKDKILDPSW 330
[242][TOP]
>UniRef100_Q3IRP2 Transcription initiation factor TFB 2 n=1 Tax=Natronomonas
pharaonis DSM 2160 RepID=Q3IRP2_NATPD
Length = 322
Score = 74.3 bits (181), Expect = 6e-12
Identities = 43/138 (31%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A LY A +Q PR++ E+ V+ K EI R Y+V++LGLE + +
Sbjct: 182 ASLYAAAKQARTPRSLDEVAKVSR-VEKSEIARTYRYVVRELGLE------IQPADPKSY 234
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RF S++ ++ +A + A++ + A+E + +SP+ +AAA +Y + L ++K K++
Sbjct: 235 VPRFASDIELSDEAERRARQLLDNAQEAGVVSGKSPVGLAAAAVYAASLLCNEKVTQKEV 294
Query: 221 SIATGVAEGTIRNSYKDL 168
S ++E TIRN Y +L
Sbjct: 295 SEVADISEVTIRNRYHEL 312
[243][TOP]
>UniRef100_C9REA0 Transcription factor TFIIB cyclin-releated protein n=1
Tax=Methanocaldococcus vulcanius M7 RepID=C9REA0_9EURY
Length = 666
Score = 74.3 bits (181), Expect = 6e-12
Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y ACR+ PRT+ EI A+ +KEIGR ++ ++L ++++ + D
Sbjct: 525 AAAIYAACRRCRVPRTLDEIAE-ASRVDRKEIGRTYRFLAREL------NIKLTPTNPID 577
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L + + A + +++A E + R P +AAA IYI + L ++ ++
Sbjct: 578 YVPRFASELGLPGEVESKAIQILQQATEKGLTSGRGPTGVAAAAIYIASVLLGCRRTQRE 637
Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
++ GV E TIRN YK+L H+
Sbjct: 638 VAEVAGVTEVTIRNRYKELTEHL 660
[244][TOP]
>UniRef100_B9ZI51 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii
ATCC 43099 RepID=B9ZI51_NATMA
Length = 321
Score = 74.3 bits (181), Expect = 6e-12
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = -1
Query: 569 LYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMR 390
LY ACR E PR++ EI +V+ + EIGR YI K+LGLE M + ++
Sbjct: 185 LYAACRMEGIPRSLDEIAAVSR-VERMEIGRTYRYISKELGLE------MQPVDPKKYVP 237
Query: 389 RFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDISI 216
RFCS L + + A E + E + +SP AAA IY L + KK ++++
Sbjct: 238 RFCSELELPDEVQSKANEIIDTTAEKGMLSGKSPTGYAAAAIYAAALLCNKKKTQREVAD 297
Query: 215 ATGVAEGTIRNSYKD 171
V E TIRN Y++
Sbjct: 298 VAQVTEVTIRNRYQE 312
[245][TOP]
>UniRef100_B9ZFI9 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii
ATCC 43099 RepID=B9ZFI9_NATMA
Length = 349
Score = 74.3 bits (181), Expect = 6e-12
Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
Frame = -1
Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
A LY + RQ PR++ EI V+ K EI R Y++++LGLE + + +
Sbjct: 210 ASLYASARQAGTPRSLDEIAGVSR-VEKDEIARTYRYVIRELGLEVQPADPVS------Y 262
Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
+ RF S+L+++ + + A++ ++ A+E I +SP+ +AAA +Y L+++K D+
Sbjct: 263 VPRFASDLDLSDETERRARQLLETAKESGIHSGKSPVGLAAAAVYAGALLTNEKVTQNDV 322
Query: 221 SIATGVAEGTIRNSYKDL 168
S ++E TIRN Y +L
Sbjct: 323 SEVASISEVTIRNRYHEL 340
[246][TOP]
>UniRef100_B5IT42 TFIIB zinc-binding family n=1 Tax=Thermococcus barophilus MP
RepID=B5IT42_9EURY
Length = 299
Score = 74.3 bits (181), Expect = 6e-12
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AAC+Y ACR PRT+ EI +A KKEIGR+ +I + L L + T D
Sbjct: 156 AACVYAACRLLKIPRTLDEIADIAR-VDKKEIGRSFRFIARNLNLTPKKLFVKPT----D 210
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ +F L ++ + + A E +++A + +SP + AA +YI + L +K+ ++
Sbjct: 211 YVNKFADELGLSEKVRRRAIELLEEAYNRGLTSGKSPAGLVAAALYIASLLEGEKRTQRE 270
Query: 224 ISIATGVAEGTIRNSYKDL 168
++ V E T+RN YK+L
Sbjct: 271 VAEVARVTEVTVRNRYKEL 289
[247][TOP]
>UniRef100_Q58192 Endonuclease Mja Tfb n=1 Tax=Methanocaldococcus jannaschii
RepID=TF2B_METJA
Length = 673
Score = 74.3 bits (181), Expect = 6e-12
Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y ACR+ PRT+ EI A+ +KEIGR ++ ++L ++++ + D
Sbjct: 532 AAAIYAACRRCRVPRTLDEIAE-ASRVDRKEIGRTYRFLAREL------NIKLTPTNPID 584
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ RF S L + + A + +++A E + R P +AAA IYI + L ++ ++
Sbjct: 585 YVPRFASELGLPGEVESKAIQILQQAAEKGLTSGRGPTGVAAAAIYIASVLLGCRRTQRE 644
Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
++ GV E TIRN YK+L H+
Sbjct: 645 VAEVAGVTEVTIRNRYKELTEHL 667
[248][TOP]
>UniRef100_C3NGJ8 Transcription factor TFIIB cyclin-related n=1 Tax=Sulfolobus
islandicus Y.N.15.51 RepID=C3NGJ8_SULIN
Length = 309
Score = 73.9 bits (180), Expect = 8e-12
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA +Y ACR+ RT+ EI A +KE+ R ++++L V + D
Sbjct: 167 AAAIYAACRRMKLARTLDEIAQYTK-ANRKEVARCYRLLLREL------DVSVPVSDPKD 219
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ R + L ++ +K A E + KA+ + + P +AAA IYI + L D+++ K+
Sbjct: 220 YVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKE 279
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
I+ GV E T+RN YK++ + IPT
Sbjct: 280 IAQVAGVTEVTVRNRYKEVTQELKISIPT 308
[249][TOP]
>UniRef100_A1RV37 Transcription initiation factor IIB n=1 Tax=Pyrobaculum islandicum
DSM 4184 RepID=TF2B_PYRIL
Length = 333
Score = 73.9 bits (180), Expect = 8e-12
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
AA LY+ACR PR + E+ A+++E+ R ++++L +V++
Sbjct: 191 AAALYMACRMMKMPRPLDELVRYTK-ASRREVARCYRLLLREL------NVKVPISDPVL 243
Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
++ R L ++ + VK A E ++KA++ I + P +AAA +YI + L D + KD
Sbjct: 244 YISRIAEQLKLSGEVVKTAIEILQKAKKAGITAGKDPAGLAAAAVYIASLLHGDNRTQKD 303
Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
++A GV E T+RN YK+L ++ +P
Sbjct: 304 FAVAAGVTEVTVRNRYKELAKTLNIKVP 331
[250][TOP]
>UniRef100_UPI000151A977 hypothetical protein PGUG_00695 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A977
Length = 339
Score = 73.6 bits (179), Expect = 1e-11
Identities = 50/160 (31%), Positives = 90/160 (56%), Gaps = 12/160 (7%)
Frame = -1
Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEM------- 420
AA + + CR+ + R+ EI ++ N KKE+GR + +++ L + + ++
Sbjct: 173 AASICLGCRKANVGRSFLEIAALTN-VPKKELGRVFKTMIQLLQEKHSNNPDVMHMTQQP 231
Query: 419 -GTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLS 249
+ A D +RRFCS+L ++ Q AA+ ++ ++ I RSPI++AA +IY+ + +
Sbjct: 232 VSSTSAEDLIRRFCSHLGLSTQISNAAEYIARRCKDEQILSGRSPITVAATVIYMASLIF 291
Query: 248 D-DKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
+ D P + I+ GV++GTI+ SYK L+ KI+ P W
Sbjct: 292 NVDVSPAR-IADKAGVSDGTIKTSYKVLFEEKDKILDPLW 330