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[1][TOP] >UniRef100_P48513 Transcription initiation factor IIB n=1 Tax=Glycine max RepID=TF2B_SOYBN Length = 313 Score = 302 bits (773), Expect = 1e-80 Identities = 150/161 (93%), Positives = 156/161 (96%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE G +VEMGTIHAGD Sbjct: 153 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLENGNAVEMGTIHAGD 212 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 FMRRFCSNL MN+QAVKAAQEAV+K+EEFDIRRSPISIAAA+IYIITQLSDDKKPLKDIS Sbjct: 213 FMRRFCSNLCMNNQAVKAAQEAVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDIS 272 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 +ATGVAEGTIRNSYKDLYPHVSKIIP WYAKEEDLKNL SP Sbjct: 273 LATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 313 [2][TOP] >UniRef100_B9T8A1 Transcription initiation factor iib, putative n=1 Tax=Ricinus communis RepID=B9T8A1_RICCO Length = 312 Score = 296 bits (759), Expect = 6e-79 Identities = 148/161 (91%), Positives = 156/161 (96%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE GQSVEMGTIHAGD Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETGQSVEMGTIHAGD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 FMRRFCSNL MN+QA+KAAQEAV+K+EEFDIRRSPISIAAA+IYII+QLSDDKK L+DIS Sbjct: 212 FMRRFCSNLGMNNQAMKAAQEAVQKSEEFDIRRSPISIAAAVIYIISQLSDDKKLLRDIS 271 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 ATGVAEGTIRNSYKDLYPHVSKIIP+WYAKEEDLKNL SP Sbjct: 272 HATGVAEGTIRNSYKDLYPHVSKIIPSWYAKEEDLKNLCSP 312 [3][TOP] >UniRef100_Q9SS44 Transcription initiation factor IIB-2 n=2 Tax=Arabidopsis thaliana RepID=TF2B2_ARATH Length = 312 Score = 295 bits (756), Expect = 1e-78 Identities = 145/161 (90%), Positives = 154/161 (95%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE GQ VEMGTIHAGD Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETGQLVEMGTIHAGD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 FMRRFCSNL M +Q VKAAQE+V+K+EEFDIRRSPISIAAA+IYIITQLSD+KKPL+DIS Sbjct: 212 FMRRFCSNLGMTNQTVKAAQESVQKSEEFDIRRSPISIAAAVIYIITQLSDEKKPLRDIS 271 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 +ATGVAEGTIRNSYKDLYPH+SKIIP WYAKEEDLKNL SP Sbjct: 272 VATGVAEGTIRNSYKDLYPHLSKIIPAWYAKEEDLKNLQSP 312 [4][TOP] >UniRef100_B9H9K1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H9K1_POPTR Length = 312 Score = 295 bits (755), Expect = 2e-78 Identities = 146/161 (90%), Positives = 153/161 (95%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE GQSVEMGTIHAGD Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEAGQSVEMGTIHAGD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 FMRRFCSNL M++ VKAA EAVK +E+FDIRRSPISIAAA+IYIITQLSDDKKPL+DIS Sbjct: 212 FMRRFCSNLGMSNHTVKAATEAVKTSEQFDIRRSPISIAAAVIYIITQLSDDKKPLRDIS 271 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 +ATGVAEGTIRNSYKDLYPHVSKIIP WYA EEDLKNLSSP Sbjct: 272 LATGVAEGTIRNSYKDLYPHVSKIIPAWYANEEDLKNLSSP 312 [5][TOP] >UniRef100_B9II90 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9II90_POPTR Length = 312 Score = 293 bits (751), Expect = 5e-78 Identities = 145/161 (90%), Positives = 153/161 (95%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE GQSVEMGTIHAGD Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETGQSVEMGTIHAGD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 FMRRFCSNL M++ VKAA EAVK +E+FDIRRSPISIAAA+IYIITQLSDDKKPL+DIS Sbjct: 212 FMRRFCSNLGMSNHTVKAATEAVKTSEQFDIRRSPISIAAAVIYIITQLSDDKKPLRDIS 271 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 +ATGVAEGTIRNSYKDLYPHVSKIIP+WYA EEDLKNL SP Sbjct: 272 LATGVAEGTIRNSYKDLYPHVSKIIPSWYASEEDLKNLCSP 312 [6][TOP] >UniRef100_A7PWI7 Chromosome chr8 scaffold_34, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7PWI7_VITVI Length = 312 Score = 292 bits (747), Expect = 1e-77 Identities = 144/161 (89%), Positives = 154/161 (95%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL EKGQSVEMGTIHAGD Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEAEKGQSVEMGTIHAGD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 FMRRFCSNL M +Q VKAAQEAV+K+EEFDIRRSP+SIAAA+IYIITQLSD+KK L+DIS Sbjct: 212 FMRRFCSNLGMTNQVVKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDIS 271 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 IATGVAEGTIRNSYKDLYPH+SKIIP+WYAKEEDL+NL SP Sbjct: 272 IATGVAEGTIRNSYKDLYPHISKIIPSWYAKEEDLRNLCSP 312 [7][TOP] >UniRef100_A7QJY1 Chromosome undetermined scaffold_109, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7QJY1_VITVI Length = 312 Score = 291 bits (744), Expect = 3e-77 Identities = 143/161 (88%), Positives = 154/161 (95%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL EKGQSVEMGTIHAGD Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEAEKGQSVEMGTIHAGD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 FMRRFCSNL M +Q VKAAQEAV+K+EEFDIRRSP+SIAAA+IYIITQLSD+KK L+DIS Sbjct: 212 FMRRFCSNLGMTNQVVKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDIS 271 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 IATGVAEGTIRNSYKDLYPH+S+IIP+WYAKEEDL+NL SP Sbjct: 272 IATGVAEGTIRNSYKDLYPHISRIIPSWYAKEEDLRNLCSP 312 [8][TOP] >UniRef100_A5BBG2 Putative uncharacterized protein (Fragment) n=1 Tax=Vitis vinifera RepID=A5BBG2_VITVI Length = 312 Score = 291 bits (744), Expect = 3e-77 Identities = 143/161 (88%), Positives = 154/161 (95%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL EKGQSVEMGTIHAGD Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEAEKGQSVEMGTIHAGD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 FMRRFCSNL M +Q VKAAQEAV+K+EEFDIRRSP+SIAAA+IYIITQLSD+KK L+DIS Sbjct: 212 FMRRFCSNLGMTNQVVKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDIS 271 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 IATGVAEGTIRNSYKDLYPH+S+IIP+WYAKEEDL+NL SP Sbjct: 272 IATGVAEGTIRNSYKDLYPHISRIIPSWYAKEEDLRNLCSP 312 [9][TOP] >UniRef100_P48512 Transcription initiation factor IIB-1 n=2 Tax=Arabidopsis thaliana RepID=TF2B1_ARATH Length = 312 Score = 285 bits (729), Expect = 2e-75 Identities = 140/161 (86%), Positives = 152/161 (94%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQEDKPRT+KEIC +ANGATKKEIGRAK+YIVK LGLE GQSV++GTIHAGD Sbjct: 152 AACLYIACRQEDKPRTIKEICVIANGATKKEIGRAKDYIVKTLGLEPGQSVDLGTIHAGD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 FMRRFCSNL M++ AVKAAQEAV+K+EEFDIRRSPISIAA +IYIITQLSDDKK LKDIS Sbjct: 212 FMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDIS 271 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 ATGVAEGTIRNSYKDLYPH+SKI P+WYAKEEDLKNLSSP Sbjct: 272 HATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 312 [10][TOP] >UniRef100_B9RIF2 Transcription initiation factor iib, putative n=1 Tax=Ricinus communis RepID=B9RIF2_RICCO Length = 312 Score = 278 bits (711), Expect = 2e-73 Identities = 138/161 (85%), Positives = 152/161 (94%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL +E GQS+EMGTIHAGD Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEVELGQSMEMGTIHAGD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 F+RRFCS+L MN+QAVKAAQEAVKK+EE DIRRSPISIAAAIIY+ITQLS++KK LKDIS Sbjct: 212 FLRRFCSHLGMNNQAVKAAQEAVKKSEELDIRRSPISIAAAIIYMITQLSEEKKLLKDIS 271 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 +TGVAEGTIRNSYKDLYP+ S+I+P+WYAKEEDL NL SP Sbjct: 272 TSTGVAEGTIRNSYKDLYPYASRIVPSWYAKEEDLINLCSP 312 [11][TOP] >UniRef100_Q8W0W3 Transcription initiation factor IIB n=3 Tax=Oryza sativa RepID=TF2B_ORYSJ Length = 312 Score = 278 bits (710), Expect = 3e-73 Identities = 136/161 (84%), Positives = 152/161 (94%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAGD Sbjct: 152 AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 F+RRFCS L MN+QAVKAAQEAV+++EE DIRRSPISIAAA+IY+ITQLSDDKKPLKDIS Sbjct: 212 FLRRFCSTLGMNNQAVKAAQEAVQRSEELDIRRSPISIAAAVIYMITQLSDDKKPLKDIS 271 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 +ATGVAEGTIRNSYKDLYP+ S++IP YAKEEDLKNL +P Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312 [12][TOP] >UniRef100_A7PQV4 Chromosome chr6 scaffold_25, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7PQV4_VITVI Length = 314 Score = 275 bits (704), Expect = 1e-72 Identities = 136/161 (84%), Positives = 152/161 (94%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AAC+YIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL +E GQS+EMGTIHAGD Sbjct: 154 AACIYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 F+RRFCS+L M +QAVKAAQEAV+K+EE DIRRSPIS+AAA+IY+ITQLSDDKK LKDIS Sbjct: 214 FLRRFCSHLGMTNQAVKAAQEAVQKSEELDIRRSPISVAAAVIYMITQLSDDKKLLKDIS 273 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 +ATGVAEGTIRNSYKDLYP+ S+IIP+ YAKEEDL+NL SP Sbjct: 274 LATGVAEGTIRNSYKDLYPYASRIIPSSYAKEEDLRNLCSP 314 [13][TOP] >UniRef100_C5X694 Putative uncharacterized protein Sb02g031020 n=1 Tax=Sorghum bicolor RepID=C5X694_SORBI Length = 312 Score = 275 bits (703), Expect = 2e-72 Identities = 134/161 (83%), Positives = 152/161 (94%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAGD Sbjct: 152 AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 F+RRFCS L MN+QAVKAAQEAV+++EE DIRRSPISIAAA+IY+ITQLS+DKKPLKDIS Sbjct: 212 FLRRFCSTLGMNNQAVKAAQEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDIS 271 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 +ATGVAEGTIRNSYKDLYP+ +++IP YAKEEDLKNL +P Sbjct: 272 LATGVAEGTIRNSYKDLYPYAARLIPNTYAKEEDLKNLCTP 312 [14][TOP] >UniRef100_B4FHS1 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B4FHS1_MAIZE Length = 312 Score = 272 bits (696), Expect = 1e-71 Identities = 133/161 (82%), Positives = 151/161 (93%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAG+ Sbjct: 152 AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGN 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 F+RRFCS L MN+QAV+AAQ+AVK +EE DIRRSPISIAAA+IY+ITQLS+DKKPLKDIS Sbjct: 212 FLRRFCSTLGMNNQAVRAAQDAVKHSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDIS 271 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 +ATGVAEGTIRNSYKDLYP+ S++IP YAKEEDLKNL +P Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312 [15][TOP] >UniRef100_B6THD9 Transcription initiation factor IIB n=1 Tax=Zea mays RepID=B6THD9_MAIZE Length = 312 Score = 270 bits (691), Expect = 5e-71 Identities = 132/161 (81%), Positives = 150/161 (93%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAGD Sbjct: 152 AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 F+RRFCS L M +QAV AA+EAV+++EE DIRRSPISIAAA+IY+ITQLS+DKKPLKDIS Sbjct: 212 FLRRFCSTLGMTNQAVNAAKEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDIS 271 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 +ATGVAEGTIRNSYKDLYP+ S++IP YAKEEDLKNL +P Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312 [16][TOP] >UniRef100_B4FRH0 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B4FRH0_MAIZE Length = 198 Score = 270 bits (691), Expect = 5e-71 Identities = 132/161 (81%), Positives = 150/161 (93%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAGD Sbjct: 38 AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGD 97 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 F+RRFCS L M +QAV AA+EAV+++EE DIRRSPISIAAA+IY+ITQLS+DKKPLKDIS Sbjct: 98 FLRRFCSTLGMTNQAVNAAKEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDIS 157 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 +ATGVAEGTIRNSYKDLYP+ S++IP YAKEEDLKNL +P Sbjct: 158 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 198 [17][TOP] >UniRef100_B8LMH3 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LMH3_PICSI Length = 313 Score = 266 bits (680), Expect = 9e-70 Identities = 130/161 (80%), Positives = 148/161 (91%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQEDKPRTVKEICSVANGA+KKE+GRAKE+IVKQL E G+S+EMGTIHAGD Sbjct: 153 AACLYIACRQEDKPRTVKEICSVANGASKKEVGRAKEFIVKQLEEEMGKSMEMGTIHAGD 212 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 F+RRFCS+L M HQAVKAA EAVKK+EE DIRRSPISIAAA IY+I+QLS++KK L+DIS Sbjct: 213 FLRRFCSHLGMGHQAVKAATEAVKKSEELDIRRSPISIAAAAIYMISQLSEEKKLLRDIS 272 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 ATGVAEGTIRNSYKDLYPH +++IP W+AKEEDLKNL +P Sbjct: 273 RATGVAEGTIRNSYKDLYPHAARLIPDWFAKEEDLKNLCAP 313 [18][TOP] >UniRef100_B9IEI3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IEI3_POPTR Length = 311 Score = 257 bits (657), Expect = 4e-67 Identities = 126/160 (78%), Positives = 143/160 (89%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQE+K RTVKEICSV NG TKKEIGRAKE+IVK L +E G S+EMGTIHA D Sbjct: 152 AACLYIACRQENKARTVKEICSVVNGTTKKEIGRAKEFIVKHLEVEMGHSMEMGTIHAAD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 ++RRFCSNL M +QAVKAA EAV+K+EE DIRRSPISIAAA+IYII QLSDDKKPLKDIS Sbjct: 212 YLRRFCSNLGMTNQAVKAAHEAVQKSEELDIRRSPISIAAAVIYIIIQLSDDKKPLKDIS 271 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSS 99 + T VAEGTI+NSYKDL PH+S+IIP+W+AKEED+KNL S Sbjct: 272 VVTQVAEGTIKNSYKDLSPHLSQIIPSWFAKEEDIKNLHS 311 [19][TOP] >UniRef100_A9T0Q7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T0Q7_PHYPA Length = 312 Score = 228 bits (582), Expect = 2e-58 Identities = 116/163 (71%), Positives = 137/163 (84%), Gaps = 2/163 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVK-EICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG 402 AACLYIACRQEDKPRT K EICSVANGA+KK+IGRA ++IVKQL + G S+EMGTIHAG Sbjct: 150 AACLYIACRQEDKPRTFKAEICSVANGASKKDIGRATKFIVKQLEEDMGISMEMGTIHAG 209 Query: 401 DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSD-DKKPLKD 225 DF+RRFCS+LNM + V+AA E VKK+E DIR+SPIS+AAA IY+I+QL++ DKK LKD Sbjct: 210 DFLRRFCSHLNMENNEVRAATETVKKSEMLDIRKSPISVAAAAIYMISQLNEKDKKALKD 269 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 IS GVAE TIRNSYKDLYPH +K+IP W+ KE DLKNL +P Sbjct: 270 ISRVAGVAEVTIRNSYKDLYPHAAKLIPDWFLKEVDLKNLPAP 312 [20][TOP] >UniRef100_A9RXM3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RXM3_PHYPA Length = 312 Score = 186 bits (472), Expect = 1e-45 Identities = 96/160 (60%), Positives = 122/160 (76%), Gaps = 2/160 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKE-ICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG 402 A+CLYIACRQEDKPRT KE ICSV+NGA+K + GR + +VKQ+ G S+EMGTIHAG Sbjct: 150 ASCLYIACRQEDKPRTFKEEICSVSNGASKTDTGRITKKLVKQIEKGMGISMEMGTIHAG 209 Query: 401 DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSD-DKKPLKD 225 DF RRFCS+L+M V+A E VKK+E I RSP+S+AAA I++I+QL++ DKK LKD Sbjct: 210 DFSRRFCSHLDMEKNEVRAITETVKKSEMLVIGRSPLSVAAAAIFMISQLNEKDKKELKD 269 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNL 105 IS GV E +IR Y++LYPH SK+IP W+ K+ DLK+L Sbjct: 270 ISRVAGVNEESIRFMYRELYPHASKLIPEWFLKDVDLKHL 309 [21][TOP] >UniRef100_B9IK69 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IK69_POPTR Length = 297 Score = 181 bits (459), Expect = 4e-44 Identities = 88/161 (54%), Positives = 120/161 (74%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACL+I+ R+ PRT+ EI SV G TKKEI +A + I + + LE +MGT++ + Sbjct: 142 AACLFISSRENKLPRTLNEISSVVYGVTKKEINKAVQSIKRHVELE-----DMGTLNPSE 196 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 +RRFCSNL M + AVKA EAV+K ++ DIRR+P S+ AAIIY ITQLSD+KKPL+DIS Sbjct: 197 LVRRFCSNLGMKNHAVKAVHEAVEKIQDVDIRRNPKSVLAAIIYTITQLSDEKKPLRDIS 256 Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 +A VAEGTI+ S+KD+ PHVS+++P WYA+EED++ + P Sbjct: 257 LAADVAEGTIKKSFKDISPHVSRLVPKWYAREEDIRRIRIP 297 [22][TOP] >UniRef100_C5YUY2 Putative uncharacterized protein Sb09g027310 n=1 Tax=Sorghum bicolor RepID=C5YUY2_SORBI Length = 311 Score = 148 bits (374), Expect = 3e-34 Identities = 75/147 (51%), Positives = 103/147 (70%), Gaps = 3/147 (2%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSV--ANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHA 405 AACLY+ACR E KPRT KE+ +V A + KKEIG+ I K LG E GQ +++G + A Sbjct: 163 AACLYVACRNEGKPRTYKELATVTAAGASAKKEIGKMTTLIKKVLGEEAGQVMDIGVVRA 222 Query: 404 GDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPLK 228 D+MRRFCS L M +Q ++AAQEA ++ E D+RR+P SIAAAI Y++ Q + K ++ Sbjct: 223 ADYMRRFCSRLGMGNQEMRAAQEAARRLENGLDVRRNPESIAAAISYMVVQRAGAGKTVR 282 Query: 227 DISIATGVAEGTIRNSYKDLYPHVSKI 147 D+S+ATGVAE TI+ ++KDL PH + Sbjct: 283 DVSMATGVAEATIKEAHKDLTPHAEML 309 [23][TOP] >UniRef100_Q5KQD1 Os05g0548200 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5KQD1_ORYSJ Length = 316 Score = 143 bits (361), Expect = 8e-33 Identities = 75/146 (51%), Positives = 104/146 (71%), Gaps = 4/146 (2%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVA--NGATKKEIGRAKEYIVKQLGLE-KGQSVEMGTIH 408 AACL+IACR E PRT KE+ SV A KKEIGR I K LG + +G+++++G + Sbjct: 166 AACLFIACRNEGMPRTYKELASVTAEGAAAKKEIGRLTTLIKKHLGDQGEGRAMDIGVVR 225 Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPL 231 + D++RRFCS L + HQ V+AA +AV++ EE D+RR+P SIAAAIIY++ Q + K + Sbjct: 226 STDYLRRFCSRLGLGHQDVRAAGDAVRRLEERLDVRRNPESIAAAIIYMVVQRAGGSKSV 285 Query: 230 KDISIATGVAEGTIRNSYKDLYPHVS 153 +D+S ATGVAEGTI ++K+L PH S Sbjct: 286 RDVSTATGVAEGTITAAHKELAPHAS 311 [24][TOP] >UniRef100_B9FLG0 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9FLG0_ORYSJ Length = 287 Score = 143 bits (361), Expect = 8e-33 Identities = 75/146 (51%), Positives = 104/146 (71%), Gaps = 4/146 (2%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVA--NGATKKEIGRAKEYIVKQLGLE-KGQSVEMGTIH 408 AACL+IACR E PRT KE+ SV A KKEIGR I K LG + +G+++++G + Sbjct: 137 AACLFIACRNEGMPRTYKELASVTAEGAAAKKEIGRLTTLIKKHLGDQGEGRAMDIGVVR 196 Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPL 231 + D++RRFCS L + HQ V+AA +AV++ EE D+RR+P SIAAAIIY++ Q + K + Sbjct: 197 STDYLRRFCSRLGLGHQDVRAAGDAVRRLEERLDVRRNPESIAAAIIYMVVQRAGGSKSV 256 Query: 230 KDISIATGVAEGTIRNSYKDLYPHVS 153 +D+S ATGVAEGTI ++K+L PH S Sbjct: 257 RDVSTATGVAEGTITAAHKELAPHAS 282 [25][TOP] >UniRef100_A2Y747 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2Y747_ORYSI Length = 319 Score = 143 bits (361), Expect = 8e-33 Identities = 75/146 (51%), Positives = 104/146 (71%), Gaps = 4/146 (2%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVA--NGATKKEIGRAKEYIVKQLGLE-KGQSVEMGTIH 408 AACL+IACR E PRT KE+ SV A KKEIGR I K LG + +G+++++G + Sbjct: 169 AACLFIACRNEGMPRTYKELASVTAEGAAAKKEIGRLTTLIKKHLGDQGEGRAMDIGVVR 228 Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPL 231 + D++RRFCS L + HQ V+AA +AV++ EE D+RR+P SIAAAIIY++ Q + K + Sbjct: 229 STDYLRRFCSRLGLGHQDVRAAGDAVRRLEERLDVRRNPESIAAAIIYMVVQRAGGSKSV 288 Query: 230 KDISIATGVAEGTIRNSYKDLYPHVS 153 +D+S ATGVAEGTI ++K+L PH S Sbjct: 289 RDVSTATGVAEGTITAAHKELAPHAS 314 [26][TOP] >UniRef100_Q6S7A3 Mutant TFIIB3 (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q6S7A3_ARATH Length = 336 Score = 139 bits (350), Expect = 2e-31 Identities = 76/159 (47%), Positives = 105/159 (66%), Gaps = 4/159 (2%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ---SVEMGTIH 408 AA + ACR+ RT+KEI VANG KK+I KE +V + LE Q S I+ Sbjct: 162 AASVSTACRELQLSRTLKEIAEVANGVDKKDI--RKESLVIKRVLESHQTSVSASQAIIN 219 Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSD-DKKPL 231 GD +RRFCS L+++ + + A EAV+KAE FDIRR+P S+ AAII++I+ +S ++KP+ Sbjct: 220 TGDLVRRFCSKLDISQREIMAIPEAVEKAENFDIRRNPKSVLAAIIFMISHISQTNRKPI 279 Query: 230 KDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDL 114 ++I I V E TI+NS KD+YP+ KIIP WYA E D+ Sbjct: 280 REIGIVAEVVENTIKNSVKDMYPYALKIIPNWYACESDI 318 [27][TOP] >UniRef100_Q9LIA6 Transcription initiation factor IIB (TFIIB)-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9LIA6_ARATH Length = 336 Score = 137 bits (346), Expect = 5e-31 Identities = 75/159 (47%), Positives = 105/159 (66%), Gaps = 4/159 (2%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ---SVEMGTIH 408 AA + ACR+ RT+KEI VANG KK+I KE +V + LE Q S I+ Sbjct: 162 AASVSTACRELQLSRTLKEIAEVANGVDKKDI--RKESLVIKRVLESHQTSVSASQAIIN 219 Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSD-DKKPL 231 G+ +RRFCS L+++ + + A EAV+KAE FDIRR+P S+ AAII++I+ +S ++KP+ Sbjct: 220 TGELVRRFCSKLDISQREIMAIPEAVEKAENFDIRRNPKSVLAAIIFMISHISQTNRKPI 279 Query: 230 KDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDL 114 ++I I V E TI+NS KD+YP+ KIIP WYA E D+ Sbjct: 280 REIGIVAEVVENTIKNSVKDMYPYALKIIPNWYACESDI 318 [28][TOP] >UniRef100_Q9M2L0 Putative uncharacterized protein F28O9.220 n=1 Tax=Arabidopsis thaliana RepID=Q9M2L0_ARATH Length = 360 Score = 137 bits (345), Expect = 6e-31 Identities = 73/165 (44%), Positives = 107/165 (64%), Gaps = 4/165 (2%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AAC+YIACR D RT++EI AN A+ +I +I ++L + K + +I + Sbjct: 202 AACIYIACRDNDMTRTMREISRFANKASISDISETVGFIAEKLEINKNWYM---SIETAN 258 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI----RRSPISIAAAIIYIITQLSDDKKPL 231 F++RFCS ++ +AV+AA EA AE +D RR+P+S+AA I+Y+I +LS +K L Sbjct: 259 FIKRFCSIFRLDKEAVEAALEA---AESYDYMTNGRRAPVSVAAGIVYVIARLSYEKHLL 315 Query: 230 KDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 K + ATGVAE TI+ +Y DLYP++ I+PTW+A DLKNL +P Sbjct: 316 KGLIEATGVAENTIKGTYGDLYPNLPTIVPTWFANANDLKNLGAP 360 [29][TOP] >UniRef100_Q1PEE4 Transcription factor IIB family protein n=2 Tax=Arabidopsis thaliana RepID=Q1PEE4_ARATH Length = 362 Score = 136 bits (343), Expect = 1e-30 Identities = 73/167 (43%), Positives = 107/167 (64%), Gaps = 6/167 (3%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AAC+YIACR D RT++EI AN A+ +I +I ++L + K + +I + Sbjct: 202 AACIYIACRDNDMTRTMREISRFANKASISDISETVGFIAEKLEINKNWYM---SIETAN 258 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI------RRSPISIAAAIIYIITQLSDDKK 237 F++RFCS ++ +AV+AA EA AE +D RR+P+S+AA I+Y+I +LS +K Sbjct: 259 FIKRFCSIFRLDKEAVEAALEA---AESYDYMTNGCSRRAPVSVAAGIVYVIARLSYEKH 315 Query: 236 PLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 LK + ATGVAE TI+ +Y DLYP++ I+PTW+A DLKNL +P Sbjct: 316 LLKGLIEATGVAENTIKGTYGDLYPNLPTIVPTWFANANDLKNLGAP 362 [30][TOP] >UniRef100_UPI00003C0936 PREDICTED: similar to Transcription initiation factor IIB (General transcription factor TFIIB) isoform 1 n=1 Tax=Apis mellifera RepID=UPI00003C0936 Length = 315 Score = 134 bits (337), Expect = 5e-30 Identities = 75/148 (50%), Positives = 95/148 (64%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLILKAL------ETSVDLITTGD 212 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + + +AA +KA E DI RSPIS+AAA IY+ +Q S+DK+ K+ Sbjct: 213 FMSRFCSNLGLPNMVQRAATHIARKAVEIDIVPGRSPISVAAAAIYMASQASEDKRSQKE 272 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SYK +YPH K+ P Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAGKLFP 300 [31][TOP] >UniRef100_UPI000186D9D8 transcription initiation factor iib, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186D9D8 Length = 313 Score = 132 bits (332), Expect = 2e-29 Identities = 75/148 (50%), Positives = 95/148 (64%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +A LYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 158 SAALYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLILKAL------ETSVDLITTGD 210 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + + +AA +KA E DI RSPIS+AAA IY+ +Q SDDK+ K+ Sbjct: 211 FMSRFCSNLGLPNMVQRAATHIARKAVELDIVPGRSPISVAAAAIYMASQASDDKRVQKE 270 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SYK +YPH +K+ P Sbjct: 271 IGDIAGVADVTIRQSYKLMYPHATKLFP 298 [32][TOP] >UniRef100_UPI0001758201 PREDICTED: similar to Transcription initiation factor IIB (General transcription factor TFIIB) n=1 Tax=Tribolium castaneum RepID=UPI0001758201 Length = 313 Score = 132 bits (332), Expect = 2e-29 Identities = 74/148 (50%), Positives = 95/148 (64%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +K+EIGR + I+K L + I GD Sbjct: 158 SACLYIACRQEGVPRTFKEICAVSK-ISKREIGRCFKLILKAL------ETSVDLITTGD 210 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + + +AA +KA E DI RSPIS+AAA IY+ +Q S+DK+ K+ Sbjct: 211 FMSRFCSNLGLPNMVQRAATHIARKAVELDIVPGRSPISVAAAAIYMASQASEDKRSQKE 270 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SYK +YPH K+ P Sbjct: 271 IGDIAGVADVTIRQSYKLMYPHAVKLFP 298 [33][TOP] >UniRef100_UPI00015B5246 PREDICTED: similar to Transcription initiation factor IIB (General transcription factor TFIIB) n=1 Tax=Nasonia vitripennis RepID=UPI00015B5246 Length = 315 Score = 132 bits (331), Expect = 3e-29 Identities = 73/148 (49%), Positives = 95/148 (64%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLILKAL------ETSVDLITTGD 212 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + + +AA +KA + DI RSPIS+ AA IY+ +Q SDDKK K+ Sbjct: 213 FMSRFCSNLGLPNMVQRAATHIARKAVDIDIVPGRSPISVTAAAIYMASQASDDKKSQKE 272 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SYK ++PH +++ P Sbjct: 273 IGDIAGVADVTIRQSYKLMFPHAARLFP 300 [34][TOP] >UniRef100_C3ZCP1 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZCP1_BRAFL Length = 319 Score = 131 bits (329), Expect = 4e-29 Identities = 75/148 (50%), Positives = 98/148 (66%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQE PRT KEIC+++ +KKEIGR + I+K L SVE+ I GD Sbjct: 164 AACLYIACRQEGVPRTFKEICAISR-VSKKEIGRVFKLILKALET----SVEL--ITTGD 216 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNLN+ Q +AA +KA E D+ RSPIS+AAA IY+ +Q S++K+ K+ Sbjct: 217 FMSRFCSNLNLPSQVQRAATHIARKAVELDLVPGRSPISVAAAAIYMASQASEEKRTQKE 276 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP ++ P Sbjct: 277 IGDIAGVADVTIRQSYRLIYPRAHELFP 304 [35][TOP] >UniRef100_B4NZP8 GE18945 n=1 Tax=Drosophila yakuba RepID=B4NZP8_DROYA Length = 315 Score = 129 bits (323), Expect = 2e-28 Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L + I D Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC+NL++ + +AA KKA E DI RSPIS+AAA IY+ +Q S+ K+ KD Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKD 272 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SYK +YPH +K+ P Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300 [36][TOP] >UniRef100_B5DHX4 GA27746 n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=B5DHX4_DROPS Length = 314 Score = 127 bits (319), Expect = 6e-28 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L + I D Sbjct: 159 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC+NL++ + +AA KKA E DI RSPIS+AAA IY+ +Q S+ K+ K+ Sbjct: 212 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 271 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SYK +YPH +K+ P Sbjct: 272 IGDIAGVADVTIRQSYKLMYPHAAKLFP 299 [37][TOP] >UniRef100_B4KHS4 GI20422 n=2 Tax=Drosophila RepID=B4KHS4_DROMO Length = 315 Score = 127 bits (319), Expect = 6e-28 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L + I D Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC+NL++ + +AA KKA E DI RSPIS+AAA IY+ +Q S+ K+ K+ Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 272 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SYK +YPH +K+ P Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300 [38][TOP] >UniRef100_B4JPZ0 GH13607 n=1 Tax=Drosophila grimshawi RepID=B4JPZ0_DROGR Length = 315 Score = 127 bits (319), Expect = 6e-28 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L + I D Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC+NL++ + +AA KKA E DI RSPIS+AAA IY+ +Q S+ K+ K+ Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 272 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SYK +YPH +K+ P Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300 [39][TOP] >UniRef100_B4HWP7 GM18405 n=1 Tax=Drosophila sechellia RepID=B4HWP7_DROSE Length = 315 Score = 127 bits (319), Expect = 6e-28 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L + I D Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC+NL++ + +AA KKA E DI RSPIS+AAA IY+ +Q S+ K+ K+ Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 272 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SYK +YPH +K+ P Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300 [40][TOP] >UniRef100_Q9NHP7 Transcription initiation factor IIB n=1 Tax=Drosophila virilis RepID=TF2B_DROVI Length = 293 Score = 127 bits (319), Expect = 6e-28 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L + I D Sbjct: 138 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 190 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC+NL++ + +AA KKA E DI RSPIS+AAA IY+ +Q S+ K+ K+ Sbjct: 191 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 250 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SYK +YPH +K+ P Sbjct: 251 IGDIAGVADVTIRQSYKLMYPHAAKLFP 278 [41][TOP] >UniRef100_P29052 Transcription initiation factor IIB n=6 Tax=Sophophora RepID=TF2B_DROME Length = 315 Score = 127 bits (319), Expect = 6e-28 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L + I D Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC+NL++ + +AA KKA E DI RSPIS+AAA IY+ +Q S+ K+ K+ Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 272 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SYK +YPH +K+ P Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300 [42][TOP] >UniRef100_Q7QG89 AGAP009558-PA n=1 Tax=Anopheles gambiae RepID=Q7QG89_ANOGA Length = 316 Score = 127 bits (318), Expect = 8e-28 Identities = 73/148 (49%), Positives = 98/148 (66%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L SV++ I D Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKALAT----SVDL--ITTAD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC+NL++ + +AA +KA E DI RSPIS+AAA IY+ +Q SD+KK K+ Sbjct: 214 FMSRFCANLDLPNVVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDNKKTHKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YPH +++ P Sbjct: 274 IGDIAGVADVTIRQSYRLMYPHAAELFP 301 [43][TOP] >UniRef100_B0WI57 Transcription initiation factor TFIIB n=1 Tax=Culex quinquefasciatus RepID=B0WI57_CULQU Length = 316 Score = 127 bits (318), Expect = 8e-28 Identities = 73/148 (49%), Positives = 97/148 (65%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L SV++ I D Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKALAT----SVDL--ITTAD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC+NL++ + +AA +KA E DI RSPIS+AAA IY+ +Q SD KK K+ Sbjct: 214 FMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDQKKTHKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YPH +++ P Sbjct: 274 IGDIAGVADVTIRQSYRLMYPHAAELFP 301 [44][TOP] >UniRef100_UPI0000521774 PREDICTED: similar to Transcription initiation factor IIB (General transcription factor TFIIB) (S300-II) n=1 Tax=Ciona intestinalis RepID=UPI0000521774 Length = 314 Score = 126 bits (317), Expect = 1e-27 Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQE PRT KEIC+++ +KKEIGR+ + IVK L + I +GD Sbjct: 159 AACLYIACRQEGVPRTFKEICAISR-ISKKEIGRSFKLIVKNL------ETNVEVITSGD 211 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNLN+ + A +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+ Sbjct: 212 FMSRFCSNLNLPPYVQRGATYIARKAVEKDLVAGRSPISVAAAAIYMASQASKEKRSQKE 271 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 IS GVAE TIR SYK ++P + P Sbjct: 272 ISEIAGVAEVTIRQSYKLMHPRAKDLFP 299 [45][TOP] >UniRef100_UPI0000E479AC PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E479AC Length = 321 Score = 125 bits (314), Expect = 2e-27 Identities = 72/163 (44%), Positives = 99/163 (60%), Gaps = 2/163 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQE PRT KEIC+V+ K+EIGR + I+K L + I GD Sbjct: 166 AACLYIACRQEGVPRTFKEICAVSR-VNKREIGRCFKLILKAL------ETNVVLITTGD 218 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL++ + +AA +KA+E D+ RSPIS+ AA IY+ +Q S++K+ K+ Sbjct: 219 FMSRFCSNLSLPPKVQRAATHIARKADELDLVAGRSPISVTAAAIYMASQASEEKRSQKE 278 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 I GVA+ TIR SYK +YP + P + +++L P Sbjct: 279 IGEIAGVADVTIRQSYKLIYPKSHDLFPQDFQFATKIEDLPPP 321 [46][TOP] >UniRef100_UPI00017B0FC9 UPI00017B0FC9 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0FC9 Length = 318 Score = 125 bits (313), Expect = 3e-27 Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 163 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 215 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +KK K+ Sbjct: 216 FMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 275 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP +++ P Sbjct: 276 IGDIAGVADVTIRQSYRLIYPRAAELFP 303 [47][TOP] >UniRef100_UPI00016E2A21 UPI00016E2A21 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E2A21 Length = 318 Score = 125 bits (313), Expect = 3e-27 Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 163 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 215 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +KK K+ Sbjct: 216 FMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 275 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP +++ P Sbjct: 276 IGDIAGVADVTIRQSYRLIYPRAAELFP 303 [48][TOP] >UniRef100_Q6B512 General transcription factor II B n=1 Tax=Oreochromis mossambicus RepID=Q6B512_OREMO Length = 318 Score = 125 bits (313), Expect = 3e-27 Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 163 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 215 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +KK K+ Sbjct: 216 FMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 275 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP +++ P Sbjct: 276 IGDIAGVADVTIRQSYRLIYPRAAELFP 303 [49][TOP] >UniRef100_Q4SSL3 Chromosome 15 SCAF14367, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SSL3_TETNG Length = 344 Score = 125 bits (313), Expect = 3e-27 Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 189 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 241 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +KK K+ Sbjct: 242 FMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 301 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP +++ P Sbjct: 302 IGDIAGVADVTIRQSYRLIYPRAAELFP 329 [50][TOP] >UniRef100_Q17AB9 Transcription initiation factor TFIIB n=1 Tax=Aedes aegypti RepID=Q17AB9_AEDAE Length = 318 Score = 125 bits (313), Expect = 3e-27 Identities = 72/148 (48%), Positives = 97/148 (65%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L SV++ I D Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKALAT----SVDL--ITTAD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC+NL++ + +AA +KA E DI RSPIS+AAA IY+ +Q SD KK K+ Sbjct: 214 FMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDQKKTHKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ ++PH +++ P Sbjct: 274 IGDIAGVADVTIRQSYRLMHPHAAELFP 301 [51][TOP] >UniRef100_Q17AB8 Transcription initiation factor TFIIB n=1 Tax=Aedes aegypti RepID=Q17AB8_AEDAE Length = 316 Score = 125 bits (313), Expect = 3e-27 Identities = 72/148 (48%), Positives = 97/148 (65%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + +K L SV++ I D Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKALAT----SVDL--ITTAD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC+NL++ + +AA +KA E DI RSPIS+AAA IY+ +Q SD KK K+ Sbjct: 214 FMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDQKKTHKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ ++PH +++ P Sbjct: 274 IGDIAGVADVTIRQSYRLMHPHAAELFP 301 [52][TOP] >UniRef100_A8QEV5 Transcription initiation factor IIB, putative n=1 Tax=Brugia malayi RepID=A8QEV5_BRUMA Length = 309 Score = 125 bits (313), Expect = 3e-27 Identities = 71/148 (47%), Positives = 90/148 (60%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACR+E PRT KEIC+ A+ +KKEIGR + I+K L + I + D Sbjct: 154 AACLYIACRKEGVPRTFKEICA-ASRVSKKEIGRCFKLIIKSL------ETSLEQITSAD 206 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC NL + H AA KKA E D+ RSPISIAAA IY+ +Q S +KK K+ Sbjct: 207 FMSRFCGNLGLPHSIQAAATRIAKKAVELDLVAGRSPISIAAAAIYMASQASSNKKTAKE 266 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I G AE T++ +YK LYP ++ P Sbjct: 267 IGEIAGAAEVTVKQTYKLLYPRAGELFP 294 [53][TOP] >UniRef100_Q7SX98 General transcription factor IIB n=1 Tax=Danio rerio RepID=Q7SX98_DANRE Length = 316 Score = 124 bits (312), Expect = 4e-27 Identities = 72/148 (48%), Positives = 92/148 (62%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +KK K+ Sbjct: 214 FMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP + + P Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAADLFP 301 [54][TOP] >UniRef100_B5XD83 Transcription initiation factor IIB n=1 Tax=Salmo salar RepID=B5XD83_SALSA Length = 318 Score = 124 bits (312), Expect = 4e-27 Identities = 72/148 (48%), Positives = 92/148 (62%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 163 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 215 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +KK K+ Sbjct: 216 FMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 275 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP + + P Sbjct: 276 IGDIAGVADVTIRQSYRLIYPRAADLFP 303 [55][TOP] >UniRef100_A2BIH7 General transcription factor IIB n=1 Tax=Danio rerio RepID=A2BIH7_DANRE Length = 316 Score = 124 bits (312), Expect = 4e-27 Identities = 72/148 (48%), Positives = 92/148 (62%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +KK K+ Sbjct: 214 FMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP + + P Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAADLFP 301 [56][TOP] >UniRef100_Q8H7W1 Putative transcription initiation factor IIB n=2 Tax=Oryza sativa RepID=Q8H7W1_ORYSJ Length = 308 Score = 124 bits (312), Expect = 4e-27 Identities = 68/142 (47%), Positives = 92/142 (64%), Gaps = 2/142 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGAT-KKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG 402 AACL+IACR E PRT+KE+ SV KKEIGR + I + LG E G ++EMG + A Sbjct: 160 AACLHIACRNEGNPRTLKELASVMRDCQDKKEIGRMERIIRRHLGEEAGTAMEMGVVRAA 219 Query: 401 DFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPLKD 225 D+M RF S L M V+ AQ A + E+ D+RR+P SIAAAIIY++ Q + + +D Sbjct: 220 DYMSRFGSRLGMGKPEVREAQRAAQTLEDKLDVRRNPESIAAAIIYMVVQRAGAQTSARD 279 Query: 224 ISIATGVAEGTIRNSYKDLYPH 159 +S A+GVAE TI+ + K+L H Sbjct: 280 VSKASGVAEATIKEACKELSQH 301 [57][TOP] >UniRef100_UPI000194CD4A PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata RepID=UPI000194CD4A Length = 316 Score = 124 bits (311), Expect = 5e-27 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+ Sbjct: 214 FMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASSEKRTQKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP + P Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301 [58][TOP] >UniRef100_Q00403 Transcription initiation factor IIB n=5 Tax=Eutheria RepID=TF2B_HUMAN Length = 316 Score = 124 bits (311), Expect = 5e-27 Identities = 72/149 (48%), Positives = 92/149 (61%), Gaps = 2/149 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+ Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 I GVA+ TIR SY+ +YP + PT Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFPT 302 [59][TOP] >UniRef100_UPI0000D99A17 PREDICTED: general transcription factor IIB n=1 Tax=Macaca mulatta RepID=UPI0000D99A17 Length = 373 Score = 124 bits (311), Expect = 5e-27 Identities = 72/149 (48%), Positives = 92/149 (61%), Gaps = 2/149 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 218 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 270 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+ Sbjct: 271 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 330 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 I GVA+ TIR SY+ +YP + PT Sbjct: 331 IGDIAGVADVTIRQSYRLIYPRAPDLFPT 359 [60][TOP] >UniRef100_Q63ZH4 LOC494830 protein n=1 Tax=Xenopus laevis RepID=Q63ZH4_XENLA Length = 316 Score = 124 bits (311), Expect = 5e-27 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETNVDLITTGD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+ Sbjct: 214 FMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP + P Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301 [61][TOP] >UniRef100_Q28G23 General transcription factor IIBgeneral transcription factor IIB n=2 Tax=Xenopus (Silurana) tropicalis RepID=Q28G23_XENTR Length = 316 Score = 124 bits (311), Expect = 5e-27 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETNVDLITTGD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+ Sbjct: 214 FMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP + P Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301 [62][TOP] >UniRef100_P29054 Transcription initiation factor IIB n=1 Tax=Xenopus laevis RepID=TF2B_XENLA Length = 316 Score = 124 bits (311), Expect = 5e-27 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETNVDLITTGD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+ Sbjct: 214 FMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP + P Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301 [63][TOP] >UniRef100_A7SH79 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SH79_NEMVE Length = 310 Score = 124 bits (310), Expect = 7e-27 Identities = 72/162 (44%), Positives = 99/162 (61%), Gaps = 2/162 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT+KEIC++ +KKEIGR + I+K L + I +GD Sbjct: 155 SACLYIACRQEGVPRTLKEICAIGK-ISKKEIGRCFKLILKHL------ETSVDLITSGD 207 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + KAA ++A E D+ RSPISIAAA IY+ +Q S++K+ K+ Sbjct: 208 FMSRFCSNLTLPLSVQKAATYIARRAVELDLVAGRSPISIAAAAIYMASQASEEKRSQKE 267 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSS 99 I GVA+ TIR SY+ L+P ++ P + ++ L S Sbjct: 268 IGDIAGVADVTIRQSYRLLFPKARELFPADFKFAVPIERLPS 309 [64][TOP] >UniRef100_UPI0000F2BACE PREDICTED: similar to alpha initiation factor n=1 Tax=Monodelphis domestica RepID=UPI0000F2BACE Length = 316 Score = 123 bits (309), Expect = 9e-27 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+ Sbjct: 214 FMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP + P Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301 [65][TOP] >UniRef100_UPI0000E80A74 PREDICTED: similar to IIB protein n=1 Tax=Gallus gallus RepID=UPI0000E80A74 Length = 468 Score = 123 bits (309), Expect = 9e-27 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 313 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 365 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+ Sbjct: 366 FMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 425 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP + P Sbjct: 426 IGDIAGVADVTIRQSYRLIYPRAPDLFP 453 [66][TOP] >UniRef100_UPI0000ECB339 Transcription initiation factor IIB (General transcription factor TFIIB) (S300-II). n=1 Tax=Gallus gallus RepID=UPI0000ECB339 Length = 306 Score = 123 bits (309), Expect = 9e-27 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 151 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 203 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+ Sbjct: 204 FMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 263 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP + P Sbjct: 264 IGDIAGVADVTIRQSYRLIYPRAPDLFP 291 [67][TOP] >UniRef100_Q3UZJ3 Putative uncharacterized protein n=1 Tax=Mus musculus RepID=Q3UZJ3_MOUSE Length = 316 Score = 122 bits (307), Expect = 2e-26 Identities = 71/149 (47%), Positives = 92/149 (61%), Gaps = 2/149 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+ Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 I GVA+ TIR SY+ +YP + P+ Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFPS 302 [68][TOP] >UniRef100_P62915 Transcription initiation factor IIB n=3 Tax=Murinae RepID=TF2B_MOUSE Length = 316 Score = 122 bits (307), Expect = 2e-26 Identities = 71/149 (47%), Positives = 92/149 (61%), Gaps = 2/149 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+ Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 I GVA+ TIR SY+ +YP + P+ Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFPS 302 [69][TOP] >UniRef100_Q2KIN8 Transcription initiation factor IIB n=1 Tax=Bos taurus RepID=TF2B_BOVIN Length = 316 Score = 122 bits (306), Expect = 2e-26 Identities = 71/149 (47%), Positives = 91/149 (61%), Gaps = 2/149 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+A A IY+ +Q S +K+ K+ Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAEAAIYMASQASAEKRTQKE 273 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 I GVA+ TIR SY+ +YP + PT Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFPT 302 [70][TOP] >UniRef100_Q7QG90 AGAP009559-PA n=1 Tax=Anopheles gambiae RepID=Q7QG90_ANOGA Length = 315 Score = 120 bits (302), Expect = 6e-26 Identities = 70/147 (47%), Positives = 94/147 (63%), Gaps = 2/147 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 ACLYIACRQE PRT KE+C+V + A+KKEIGR + I K L + + I + DF Sbjct: 157 ACLYIACRQEGVPRTFKEMCAVCS-ASKKEIGRCFKLITKVL------ATSLDHITSEDF 209 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDI 222 M+RFCS L + H+ KAA +KA E D+ RSPIS+AAA IY+ +Q+S LK + Sbjct: 210 MQRFCSKLFLPHEVQKAATHIAQKAFEADLVPDRSPISVAAAAIYMASQVSATAMSLKAV 269 Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIP 141 + GVAE TI+ SYK ++PH ++ P Sbjct: 270 AAIAGVAELTIKQSYKLMHPHAWELFP 296 [71][TOP] >UniRef100_B3RPB4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RPB4_TRIAD Length = 340 Score = 119 bits (297), Expect = 2e-25 Identities = 74/162 (45%), Positives = 96/162 (59%), Gaps = 2/162 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +A LYIACRQE PRT KEIC+V+ +KKEIGR + I+K L +VEM I D Sbjct: 185 SASLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKAILKALET----NVEM--ISTQD 237 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNLN+ + KAA +A E D+ RSP+S+ AA IY+ +Q SD KK K+ Sbjct: 238 FMSRFCSNLNLPNYVQKAASHIAHRAIELDLAPGRSPVSVTAAAIYLASQASDTKKSQKE 297 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSS 99 I GVA+ TIR SY+ L P + P + + + L S Sbjct: 298 IGDVAGVADVTIRQSYRLLLPRSKDLFPADFVFKTPIDQLPS 339 [72][TOP] >UniRef100_UPI00017936E7 PREDICTED: similar to Transcription initiation factor IIB (General transcription factor TFIIB) n=1 Tax=Acyrthosiphon pisum RepID=UPI00017936E7 Length = 310 Score = 118 bits (296), Expect = 3e-25 Identities = 69/148 (46%), Positives = 92/148 (62%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +A LYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 155 SASLYIACRQEGVPRTFKEICAVSK-VSKKEIGRVFKLILKAL------ETSVDLITTGD 207 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC NL + + +AA KKA E+DI RSPIS+AAA I++ +Q SD+K+ K+ Sbjct: 208 FMSRFCCNLGLPNMVQRAATHIAKKAVEYDIVPGRSPISVAAAAIFMASQASDEKRSQKE 267 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVAE TI+ SYK + + + + P Sbjct: 268 IGDIAGVAEVTIKQSYKLILANATLLFP 295 [73][TOP] >UniRef100_Q3UNY0 Putative uncharacterized protein n=1 Tax=Mus musculus RepID=Q3UNY0_MOUSE Length = 316 Score = 118 bits (295), Expect = 4e-25 Identities = 70/148 (47%), Positives = 89/148 (60%), Gaps = 2/148 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 162 ACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGDL 214 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDI 222 M RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+I Sbjct: 215 MSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEI 274 Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIPT 138 GVA+ TIR SY+ YP + P+ Sbjct: 275 GDIAGVADVTIRQSYRLNYPRAPDLFPS 302 [74][TOP] >UniRef100_UPI000192557A PREDICTED: similar to general transcription factor IIB n=1 Tax=Hydra magnipapillata RepID=UPI000192557A Length = 275 Score = 117 bits (292), Expect = 8e-25 Identities = 68/148 (45%), Positives = 90/148 (60%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+++ KKEIGR + I+K L + I + D Sbjct: 120 SACLYIACRQEGVPRTFKEICAISK-IPKKEIGRCFKLILKAL------EASVDIITSED 172 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL++ +AA ++A E D+ RSP+S+AAA IY+ +Q S DKK KD Sbjct: 173 FMSRFCSNLSLPASVQRAATYIARRAMELDLVPGRSPVSVAAAAIYLASQASLDKKSQKD 232 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ L + + P Sbjct: 233 IGDIAGVADVTIRQSYRSLVVRAADLFP 260 [75][TOP] >UniRef100_A8X282 C. briggsae CBR-TTB-1 protein n=1 Tax=Caenorhabditis briggsae AF16 RepID=A8X282_CAEBR Length = 306 Score = 116 bits (291), Expect = 1e-24 Identities = 65/148 (43%), Positives = 91/148 (61%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACR++ PRT KEIC+V+ +KKEIGR + I++ L + I + D Sbjct: 151 AACLYIACRKDGVPRTFKEICAVSR-VSKKEIGRCFKIIIRNL------ETNLEQITSAD 203 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC NL + + AA K+A + D+ R+PISIAAA IY+ +Q S +K+ K+ Sbjct: 204 FMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRTPISIAAAAIYMASQASGEKRSAKE 263 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I G AE T+R +YK LYP +++ P Sbjct: 264 IGDVAGAAEITVRQTYKLLYPKAAELFP 291 [76][TOP] >UniRef100_C4J4Z3 Putative uncharacterized protein n=1 Tax=Zea mays RepID=C4J4Z3_MAIZE Length = 308 Score = 115 bits (287), Expect = 3e-24 Identities = 61/151 (40%), Positives = 97/151 (64%), Gaps = 5/151 (3%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANG--ATKKEIGRAKEYIVKQLGLEKG-QSVEMGTIH 408 AACLY+ACR PRT KE+ + A +K+IG+ I K+LG E G ++++MG + Sbjct: 158 AACLYVACRSAGAPRTFKELAAATRDGPAARKDIGKLIALIRKRLGDEAGGEAMDMGVVR 217 Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYI-ITQLSDDKKP 234 A D++ RF S L + V+A QEA ++ ++ D+RR+P S AAAI+++ + + + Sbjct: 218 AADYVERFGSLLGIGEGEVRAVQEAARRMQDHLDVRRNPDSTAAAIVFMAMERRAGAGSS 277 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIP 141 ++D+S ATGVAE TI+ +Y++LYPH + P Sbjct: 278 IRDVSAATGVAENTIKQAYRELYPHADLLFP 308 [77][TOP] >UniRef100_O16991 Transcription initiation factor IIB n=1 Tax=Caenorhabditis elegans RepID=TF2B_CAEEL Length = 306 Score = 114 bits (286), Expect = 4e-24 Identities = 66/148 (44%), Positives = 90/148 (60%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACR++ PRT KEIC+V+ +KKEIGR + IV+ L + I + D Sbjct: 151 AACLYIACRKDGVPRTFKEICAVSR-VSKKEIGRCFKIIVRSL------ETNLEQITSAD 203 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFC NL++ + AA K A + D+ R+PISIAAA IY+ +Q S +K+ K+ Sbjct: 204 FMSRFCGNLSLPNSIQAAATRIAKCAVDMDLVAGRTPISIAAAAIYMASQASAEKRSAKE 263 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I G AE T+R +YK LYP ++ P Sbjct: 264 IGDVAGAAEITVRQTYKLLYPKALELFP 291 [78][TOP] >UniRef100_C5YUY1 Putative uncharacterized protein Sb09g027300 n=1 Tax=Sorghum bicolor RepID=C5YUY1_SORBI Length = 286 Score = 113 bits (282), Expect = 1e-23 Identities = 62/151 (41%), Positives = 96/151 (63%), Gaps = 7/151 (4%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANG--ATKKEIGRAKEYIVKQLGLEKGQS---VEMGT 414 AACLY+ACR+ PRT KE+ + A +K+IG+ I K+LG E G +++G Sbjct: 134 AACLYVACRRAGAPRTFKELAAATRDGPAARKDIGKLIALIRKRLGDEAGGGEAMMDIGV 193 Query: 413 IHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYI-ITQLSDDK 240 + A D++ RF S L M V+A QEA ++ ++ D+RR+P S AAAIIY+ + + + Sbjct: 194 VRAADYVARFGSQLGMEAGEVRAVQEAARRMQDQLDVRRNPDSTAAAIIYMAMERRAGAG 253 Query: 239 KPLKDISIATGVAEGTIRNSYKDLYPHVSKI 147 + ++D+S ATGVAE TI+ +Y++LYPH + Sbjct: 254 RSIRDVSAATGVAENTIKQAYRELYPHADML 284 [79][TOP] >UniRef100_B8B6F7 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=B8B6F7_ORYSI Length = 341 Score = 110 bits (274), Expect = 1e-22 Identities = 61/156 (39%), Positives = 98/156 (62%), Gaps = 14/156 (8%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVAN--GATKKEIGRAKEYIVKQLGLEK---GQSVEMGT 414 AACL+ ACR E PRT+KE+ + + ATK+++G+ I + LG+E+ Q+ +M Sbjct: 182 AACLHAACRVEGAPRTLKELIAATSDAAATKRDLGKFINAIKRHLGMEERGQDQAADMKA 241 Query: 413 --------IHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIIT 258 + AGD++ R+ S + M+ Q AA+ A + + D+RR+P SIAAAI+Y+ Sbjct: 242 SGGGVGVVVRAGDYLHRYGSAVGMSGQEASAARRAAGRLDSLDVRRNPQSIAAAIVYMAA 301 Query: 257 QLSDD-KKPLKDISIATGVAEGTIRNSYKDLYPHVS 153 Q S +K ++++S ATGV+E TI+++YKDL PH + Sbjct: 302 QGSSGVRKSVREVSAATGVSESTIKDAYKDLCPHAA 337 [80][TOP] >UniRef100_Q8SRP3 Transcription initiation factor IIB n=1 Tax=Encephalitozoon cuniculi RepID=TF2B_ENCCU Length = 312 Score = 108 bits (271), Expect = 2e-22 Identities = 70/161 (43%), Positives = 91/161 (56%), Gaps = 3/161 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AAC+YIACRQE+ PRT KEI SV K+EIGR + I L M T+ + Sbjct: 157 AACIYIACRQEECPRTFKEI-SVMTAVQKREIGRCFKLISPHLE-------RMATMSTEN 208 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL-SDDKKPLK 228 + RFCS+LN+N + K A E K A E +SP SIAAA+IY++T L ++KK K Sbjct: 209 IIARFCSDLNLNIKIQKIATEIAKAAHELGCLAGKSPDSIAAAVIYMVTNLFPEEKKIQK 268 Query: 227 DISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNL 105 DI T V E TI+N+YK+L IIP +E + L Sbjct: 269 DIQFVTNVTEVTIKNTYKELLTFKYDIIPENMVNKESIDKL 309 [81][TOP] >UniRef100_UPI000155D43D PREDICTED: similar to general transcription factor IIB, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155D43D Length = 544 Score = 107 bits (268), Expect = 5e-22 Identities = 64/148 (43%), Positives = 87/148 (58%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y+A + + RT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 389 AAAIYMASQASTEKRTQKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 441 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+ Sbjct: 442 FMSRFCSNLGLPKQVQMAATHIARKAVEIDLVPGRSPISVAAAAIYMASQASTEKRTQKE 501 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I GVA+ TIR SY+ +YP + P Sbjct: 502 IGDIAGVADVTIRQSYRLIYPRAPDLFP 529 Score = 105 bits (263), Expect = 2e-21 Identities = 62/137 (45%), Positives = 83/137 (60%), Gaps = 2/137 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 295 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 347 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+ Sbjct: 348 FMSRFCSNLGLPKQVQMAATHIARKAVEIDLVPGRSPISVAAAAIYMASQASTEKRTQKE 407 Query: 224 ISIATGVAEGTIRNSYK 174 I + +++ I +K Sbjct: 408 ICAVSRISKKEIGRCFK 424 [82][TOP] >UniRef100_Q54FD6 Transcription initiation factor IIB n=1 Tax=Dictyostelium discoideum RepID=TF2B_DICDI Length = 325 Score = 106 bits (265), Expect = 1e-21 Identities = 67/153 (43%), Positives = 89/153 (58%), Gaps = 6/153 (3%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSVEMGTI 411 AA LYIACRQE RT KEI ++ N KKEI R KE L L+ TI Sbjct: 168 AAALYIACRQEHLSRTFKEIAALTN-VPKKEISRCYKIMKETFASVLNLQ--------TI 218 Query: 410 HAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKK 237 + DF RFCS L + + K A+ K A + I +SPIS+ AA IY+++QLS +K+ Sbjct: 219 SSEDFTSRFCSTLKLPNDVKKGAEHVSKMAMDMGIVAGKSPISVTAASIYMVSQLSPEKR 278 Query: 236 PLKDISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 K I+ +GV+E TIRN+YKDLY ++IP+ Sbjct: 279 TQKQIADVSGVSEVTIRNAYKDLYAKRDQLIPS 311 [83][TOP] >UniRef100_A3AF21 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=A3AF21_ORYSJ Length = 309 Score = 105 bits (263), Expect = 2e-21 Identities = 59/129 (45%), Positives = 82/129 (63%), Gaps = 2/129 (1%) Frame = -1 Query: 539 PRTVKEICSVANGAT-KKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLNMN 363 PRT+KE+ SV KKEIGR + I + LG E G ++EMG + A D+M RF S L M Sbjct: 174 PRTLKELASVMRDCQDKKEIGRMERIIRRHLGEEAGTAMEMGVVRAADYMSRFGSRLGMG 233 Query: 362 HQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPLKDISIATGVAEGTIR 186 V+ AQ A + E+ D+RR+P SIAAAIIY++ Q + + +D+S A+GVAE TI+ Sbjct: 234 KPEVREAQRAAQTLEDKLDVRRNPESIAAAIIYMVVQRAGAQTSARDVSKASGVAEATIK 293 Query: 185 NSYKDLYPH 159 + K+L H Sbjct: 294 EACKELSQH 302 [84][TOP] >UniRef100_B9R918 Transcription initiation factor iib, putative n=1 Tax=Ricinus communis RepID=B9R918_RICCO Length = 89 Score = 105 bits (261), Expect = 3e-21 Identities = 51/73 (69%), Positives = 60/73 (82%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLYIACRQE+KPRT KEICSV NGATKKEIGRA+ +I+K L +E G VE GTIHA D Sbjct: 18 AACLYIACRQENKPRTPKEICSVVNGATKKEIGRAEVFILKHLEVEMGH-VEAGTIHAAD 76 Query: 398 FMRRFCSNLNMNH 360 ++RR CSNL + + Sbjct: 77 YLRRVCSNLGLTN 89 [85][TOP] >UniRef100_B6JY64 Transcription factor TFIIB n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JY64_SCHJY Length = 339 Score = 100 bits (249), Expect = 8e-20 Identities = 70/172 (40%), Positives = 97/172 (56%), Gaps = 14/172 (8%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL----------GLEKGQS 429 AAC+YIACRQ PRT EIC++ N A KKEIGR + + + L KGQ Sbjct: 165 AACIYIACRQGKVPRTFMEICTLTNVA-KKEIGRVYKTLQRMLTEGGALHNSVDAFKGQE 223 Query: 428 -VEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKA--EEFDIRRSPISIAAAIIYIIT 258 ++ + A D M RFC+ L + AA E ++A E RSPISIAA+ IY+I+ Sbjct: 224 YIQNSSTSAEDLMVRFCNRLQLPTFVQLAAAELARRAGQEGTLAGRSPISIAASGIYMIS 283 Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEEDLKNL 105 L K K+IS TGV++ TIR +YK L+ +K++ P W AK+ + +L Sbjct: 284 SLMGYPKTPKEISEVTGVSDSTIRIAYKLLHAERNKLVDPKWVAKDRTMDSL 335 [86][TOP] >UniRef100_UPI00005A11DE PREDICTED: similar to general transcription factor IIB isoform 2 n=1 Tax=Canis lupus familiaris RepID=UPI00005A11DE Length = 273 Score = 99.0 bits (245), Expect = 2e-19 Identities = 59/119 (49%), Positives = 74/119 (62%), Gaps = 2/119 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLYIACRQE PRT KEIC+V+ +KKEIGR + I+K L + I GD Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLK 228 FM RFCSNL + Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQK 272 [87][TOP] >UniRef100_UPI0000EBC715 PREDICTED: similar to Transcription initiation factor IIB (General transcription factor TFIIB) (S300-II) n=1 Tax=Bos taurus RepID=UPI0000EBC715 Length = 149 Score = 98.2 bits (243), Expect = 4e-19 Identities = 59/136 (43%), Positives = 79/136 (58%), Gaps = 2/136 (1%) Frame = -1 Query: 539 PRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLNMNH 360 P + EIC+V+ +KKEIGR + I+K L + I GDFM RFCSNL + Sbjct: 7 PSLIPEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGDFMSRFCSNLCLPK 59 Query: 359 QAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDISIATGVAEGTIR 186 Q AA +KA E D+ RSPIS+AAA IY+ +Q S +K+ K+I GVA+ TIR Sbjct: 60 QVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIR 119 Query: 185 NSYKDLYPHVSKIIPT 138 SY+ +YP + PT Sbjct: 120 QSYRLIYPRAPDLFPT 135 [88][TOP] >UniRef100_A8IM89 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8IM89_CHLRE Length = 312 Score = 98.2 bits (243), Expect = 4e-19 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 9/170 (5%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICS-VANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG 402 A+CL+ ACRQE +PRT KEI S + N +KKEIGR + + + L+K + G A Sbjct: 148 ASCLFWACRQEKQPRTFKEIVSCLGNDVSKKEIGRTFKDLQQ---LKKDELHRQGA--AA 202 Query: 401 DFMRRFCSN-LNMNHQAVKAAQEAVKKAEEFDIR-----RSPISIAAAIIYIITQLSDDK 240 D + C+ L M+ + + A++ A+ D R R+P S+A+A++ I L++ + Sbjct: 203 DALASSCNQTLRMDFKWRRLAEDIATAAKPADRRMPWDGRTPTSVASAVVLIAMALAEAR 262 Query: 239 --KPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 + L +++ + VAEGTIR YKDL+PH+ +++PT ++E+L+ L +P Sbjct: 263 FDEALSKVAVVSSVAEGTIRGVYKDLFPHLRELVPTESVRDEELQRLPNP 312 [89][TOP] >UniRef100_C4QEJ3 Transcription initiation factor iib, putative n=2 Tax=Schistosoma mansoni RepID=C4QEJ3_SCHMA Length = 308 Score = 98.2 bits (243), Expect = 4e-19 Identities = 55/147 (37%), Positives = 84/147 (57%), Gaps = 2/147 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 ACLY+ACRQE PRT KE+C+V+ +KKEIG+ + I+K L + ++ DF Sbjct: 155 ACLYMACRQEGVPRTFKEVCAVSR-VSKKEIGKVFKKILKIL------ETNVQSVTVEDF 207 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDI 222 M RFC NLN+N + A ++A ++ RSP+S+AAA IY+ +K ++I Sbjct: 208 MSRFCGNLNLNIAVQRVANVVARRALNLNLVAGRSPVSVAAAAIYMAAYALGYRKEKREI 267 Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIP 141 G AE TI +Y+ ++ S++ P Sbjct: 268 GDVAGCAEATITCTYRAMHSRASELFP 294 [90][TOP] >UniRef100_Q6E6D9 Transcription initiation factor TFIIB n=1 Tax=Antonospora locustae RepID=Q6E6D9_ANTLO Length = 306 Score = 97.1 bits (240), Expect = 9e-19 Identities = 63/150 (42%), Positives = 87/150 (58%), Gaps = 3/150 (2%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AAC+YIACRQE PRT KEI SV +K+IGRA + I LEK +V + D Sbjct: 151 AACIYIACRQEGCPRTFKEI-SVLTAVPRKDIGRAYKIIYPH--LEKFVAVSV-----KD 202 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQL-SDDKKPLK 228 + RFCSNL++ H A K A + + DI +S SIAAAI+Y++T + S K K Sbjct: 203 IVSRFCSNLDLGHDAEKLAVAIAQNVQRLDILTGKSTDSIAAAIVYLVTNVFSQHKSMQK 262 Query: 227 DISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 + + V + TI+N YK+L H ++IP+ Sbjct: 263 FLQNTSNVTDVTIKNVYKELVLHKEEVIPS 292 [91][TOP] >UniRef100_B7XLJ0 Transcription initiation factor IIB n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XLJ0_ENTBH Length = 311 Score = 97.1 bits (240), Expect = 9e-19 Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 3/148 (2%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 AC+YIAC+ E PRT KEI SV K+EIG+ + I K++ G + D Sbjct: 158 ACIYIACKTEGCPRTFKEI-SVITVVPKREIGKCYKLISKEIDTT-------GIMATADI 209 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPL-KD 225 + RFCS+LN+N + A+ KK ++ RSP SIA+AIIY+ L D L KD Sbjct: 210 VGRFCSDLNLNAKIQNTARYIAKKVQDIGCLAGRSPDSIASAIIYLTLCLYPDFLFLQKD 269 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I T V + TIRN+YKDL P+ +IIP Sbjct: 270 IQYVTNVTDVTIRNTYKDLLPYKKEIIP 297 [92][TOP] >UniRef100_A4S6Z8 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S6Z8_OSTLU Length = 390 Score = 96.3 bits (238), Expect = 2e-18 Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 11/158 (6%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL-GLEKGQSVEMGTIHAG 402 AACLYIA RQE RT KE+C A G T KEIGR ++I+K GL + +M T Sbjct: 170 AACLYIAARQEGMTRTFKEVCGAAQGTTVKEIGRCYKFILKVCDGLNMQMNEQMITPEL- 228 Query: 401 DFMRRFCSNLNM-NHQAVKAAQEAV------KKAEEFDIRRSPISIAAAIIYI---ITQL 252 RFC NL M +H +K V + +E + P S+AAA I+I + ++ Sbjct: 229 -LTNRFCGNLGMSDHDFLKLCSHIVRTFRELRDSEGHKSEKQPASVAAAAIFIASVVREM 287 Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 DK L IS +G+AE TIR S+ D+ P+ S+++P+ Sbjct: 288 HKDKASLFRISEVSGMAEVTIRTSFFDMVPYASRLLPS 325 [93][TOP] >UniRef100_C1MZY4 Transcription initiation factor n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MZY4_9CHLO Length = 370 Score = 95.5 bits (236), Expect = 3e-18 Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 10/161 (6%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL-GLEKGQSVEMGTIHAG 402 AACLYI+CRQE RT KEIC A T KEIG+ ++IVK + GL +M I Sbjct: 164 AACLYISCRQEGTNRTFKEICGGAVNTTVKEIGKCYKFIVKTIDGLNTTMMEQM--ITPE 221 Query: 401 DFMRRFCSNLNM-NHQAVKAAQEAV------KKAEEFDIRRSPISIAAAIIYIITQLSDD 243 RFC NL + N + +K A + + +E + P S+AAA I++ Q+ D Sbjct: 222 KLTNRFCGNLGLANLEFLKLATTVIGTFNNLRLSEGHKSEKQPASVAAAAIWLCVQIMDK 281 Query: 242 KK--PLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAK 126 + L+ IS +G+AE TI SY D+YP+ ++++P Y + Sbjct: 282 QHEITLRKISEVSGMAETTITTSYVDMYPYATRMLPRAYVE 322 [94][TOP] >UniRef100_C4V7B4 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V7B4_NOSCE Length = 333 Score = 95.5 bits (236), Expect = 3e-18 Identities = 63/160 (39%), Positives = 90/160 (56%), Gaps = 3/160 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 AC+YIACR E+ PRT KE+ S+ KKEIG++ + I + + + D Sbjct: 179 ACIYIACRLENCPRTFKEV-SLITSVQKKEIGKSFKLISPHVE-------NLTVVSTKDI 230 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL-SDDKKPLKD 225 + RFCS+L +N + + A K +E I +SP SIAAAIIY++T L + +K KD Sbjct: 231 VARFCSDLRLNIKIQRLAFAISAKVQEAGILAGKSPDSIAAAIIYMVTYLVPEGRKVQKD 290 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNL 105 I T V E TI+N+YK+L + IIPT +E + NL Sbjct: 291 IQYVTNVTEVTIKNTYKELAIFKNVIIPTDIVSQEAIDNL 330 [95][TOP] >UniRef100_B7XLT0 Transcription initiation factor IIB n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XLT0_ENTBH Length = 213 Score = 95.5 bits (236), Expect = 3e-18 Identities = 62/148 (41%), Positives = 84/148 (56%), Gaps = 3/148 (2%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 AC+YIAC+ E PRT KEI SV K+EIG+ + I K++ + + D Sbjct: 60 ACIYIACKTEGCPRTFKEI-SVITVVPKREIGKCYKLISKEIDTTR-------IMATADI 111 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPL-KD 225 + RFCS+LN+N + A+ KK ++ RSP SIA+AIIY+ L D L KD Sbjct: 112 VGRFCSDLNLNAKIQNTARYIAKKVQDIGCLAGRSPDSIASAIIYLTLCLYPDFLFLQKD 171 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I T V + TIRN+YKDL P+ +IIP Sbjct: 172 IQYVTNVTDVTIRNTYKDLLPYKKEIIP 199 [96][TOP] >UniRef100_C1EIY3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EIY3_9CHLO Length = 364 Score = 95.1 bits (235), Expect = 3e-18 Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 11/172 (6%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LYIACRQE RT KEIC A T KEIGR +YIVK + Q +E I Sbjct: 164 AASLYIACRQEGTNRTFKEICGGAPNTTVKEIGRCYKYIVKAIDGLNTQMMEQ-MITPEK 222 Query: 398 FMRRFCSNLNMNH-------QAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQL---- 252 RFC NL + + AV A +++ E + P S+AAA I++ Q+ Sbjct: 223 LTNRFCGNLGLANLEFLKLATAVIATFRSLRITEGHTSEKQPASVAAAAIWLCVQIWRGE 282 Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96 + + +K IS +G+AE TI SY D+YP+ +K++P Y E + L +P Sbjct: 283 AAEGIDVKRISEISGMAEATILTSYADMYPYAAKMLPEAYV--ERIPELEAP 332 [97][TOP] >UniRef100_Q00VJ4 Transcription initiation factor IIB [Oryza sativa (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00VJ4_OSTTA Length = 395 Score = 94.4 bits (233), Expect = 6e-18 Identities = 62/158 (39%), Positives = 86/158 (54%), Gaps = 11/158 (6%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL-GLEKGQSVEMGTIHAG 402 AACLYIA RQE RT KE+C A G T KEIGR ++I+K GL + +M T Sbjct: 173 AACLYIAARQEGMTRTFKEVCGAAQGTTVKEIGRCYKFILKVCDGLNMQMNEQMITPEL- 231 Query: 401 DFMRRFCSNLNM-NHQAVKAAQEAVKKAEEF------DIRRSPISIAAAIIYI---ITQL 252 RFC NL + H+ +K V+ +E + P S+AAA I+I + + Sbjct: 232 -LTNRFCGNLGIGEHEYLKLCSHIVRTFKELRDSEGHRSEKQPASVAAASIFISAVVKGI 290 Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 DK L IS +G+AE TIR S+ D+ P+ SK++P+ Sbjct: 291 HKDKASLFRISEVSGMAEVTIRTSFFDMVPYASKLLPS 328 [98][TOP] >UniRef100_O13749 Transcription initiation factor IIB n=1 Tax=Schizosaccharomyces pombe RepID=TF2B_SCHPO Length = 340 Score = 94.4 bits (233), Expect = 6e-18 Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 14/166 (8%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL-----------GLEKGQ 432 AAC+YIACRQ PRT EIC++ N KKEIGR + + + L L+ + Sbjct: 165 AACIYIACRQGKVPRTFMEICTLTN-VPKKEIGRVYKTLQRMLTEGGALHNSVDALKGHE 223 Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKA--EEFDIRRSPISIAAAIIYIIT 258 ++ + A D M RFC+ L + AA E ++A + RSPISIAA+ IY+I+ Sbjct: 224 YIQSSSTSAEDLMVRFCNRLMLPMSVQSAAAELARRAGLQGTLAGRSPISIAASGIYMIS 283 Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKE 123 L K K+IS TGV++ TIR +YK L+ ++I P W A + Sbjct: 284 ALMGYPKTPKEISEVTGVSDSTIRIAYKLLHAERKELIDPKWIANK 329 [99][TOP] >UniRef100_A2STL9 Transcription initiation factor IIB (TFIIB) n=1 Tax=Methanocorpusculum labreanum Z RepID=A2STL9_METLZ Length = 340 Score = 94.0 bits (232), Expect = 8e-18 Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACRQ + PRT+ EI V+ ++KEIGR +I ++LGL+ + GD Sbjct: 199 AAALYAACRQCNVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLK------LLPTSPGD 251 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS L + + A E +K+A E ++ R P +AAA IYI + LS +++ ++ Sbjct: 252 YVPRFCSGLGLKGEVQSRAMEILKQAGERELTSGRGPTGVAAAAIYISSILSGERRTQRE 311 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 312 VADVAGVTEVTIRNRYKEL 330 [100][TOP] >UniRef100_C8S6Q6 Transcription factor TFIIB cyclin-related protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S6Q6_FERPL Length = 328 Score = 94.0 bits (232), Expect = 8e-18 Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACRQ PRT+ EI + + +KEIGR +I ++LGL+ + D Sbjct: 187 AAALYAACRQAGVPRTLDEIATYSR-VDRKEIGRTYRFIARELGLK------LLPTSPAD 239 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFC+ L ++ + K A E +KKAEE ++ R P +AAA IYI + L+ +++ ++ Sbjct: 240 YVPRFCAALGLSGEVQKKAIEIIKKAEEKELTSGRGPTGVAAAAIYIASILTGERRTQRE 299 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 300 VAEVAGVTEVTIRNRYKEL 318 [101][TOP] >UniRef100_A2YLM6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2YLM6_ORYSI Length = 354 Score = 92.8 bits (229), Expect = 2e-17 Identities = 60/167 (35%), Positives = 91/167 (54%), Gaps = 27/167 (16%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVAN--GATKKEIGRAKEYIVKQLGLEKGQSVEMG---- 417 AACL+ ACR E PRT+KE+ + ATK+++G+ I + LG + E G Sbjct: 183 AACLHTACRMEGAPRTLKELIAATPDAAATKRDLGKFIHAIKRLLG-SNDEEAEAGQDQA 241 Query: 416 ----------------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPIS 288 + A +++ R+ S + M+ Q V AAQ A + +E D+RR+P S Sbjct: 242 GSKATNGCGGGGGAGAVVRASNYLLRYGSAVGMSGQEVSAAQRAASRLDESLDVRRNPQS 301 Query: 287 IAAAIIYIITQLSDD----KKPLKDISIATGVAEGTIRNSYKDLYPH 159 IAAAIIY+ Q + K ++++S ATGV+E TI+++YKDL H Sbjct: 302 IAAAIIYMAVQRAGGGGGRSKSVREVSAATGVSESTIKDAYKDLCQH 348 [102][TOP] >UniRef100_Q6Z470 Putative Transcription initiation factor IIB n=1 Tax=Oryza sativa Japonica Group RepID=Q6Z470_ORYSJ Length = 354 Score = 92.0 bits (227), Expect = 3e-17 Identities = 60/167 (35%), Positives = 90/167 (53%), Gaps = 27/167 (16%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVAN--GATKKEIGRAKEYIVKQLGLEKGQSVEMG---- 417 AACL+ ACR E PRT+KE+ + ATK+ +G+ I + LG + E G Sbjct: 183 AACLHTACRMEGAPRTLKELIAATPDAAATKRNLGKFIHAIKRLLG-SNDEEAEAGQDQA 241 Query: 416 ----------------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPIS 288 + A +++ R+ S + M+ Q V AAQ A + +E D+RR+P S Sbjct: 242 GSKATNGCGGGGGAGAVVRASNYLLRYGSAVGMSGQEVSAAQRAASRLDESLDVRRNPQS 301 Query: 287 IAAAIIYIITQLSDD----KKPLKDISIATGVAEGTIRNSYKDLYPH 159 IAAAIIY+ Q + K ++++S ATGV+E TI+++YKDL H Sbjct: 302 IAAAIIYMAVQRAGGGGGRSKSVREVSAATGVSESTIKDAYKDLCQH 348 [103][TOP] >UniRef100_O28970 Transcription initiation factor IIB n=1 Tax=Archaeoglobus fulgidus RepID=TF2B_ARCFU Length = 326 Score = 92.0 bits (227), Expect = 3e-17 Identities = 55/139 (39%), Positives = 84/139 (60%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACRQ PRT+ EI + + +KEIGR +I ++LGL+ M T A D Sbjct: 185 AAALYAACRQAGVPRTLDEIATYSR-VDRKEIGRTYRFITRELGLKL-----MPTSPA-D 237 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFC+ L ++ + K A E +KKAEE ++ R P +AAA +Y+ + L +++ ++ Sbjct: 238 YIPRFCAALGLSGEVQKKAIEIIKKAEERELTSGRGPTGVAAAALYVASILLGERRTQRE 297 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 298 VAEVAGVTEVTIRNRYKEL 316 [104][TOP] >UniRef100_Q6CD97 YALI0C02563p n=1 Tax=Yarrowia lipolytica RepID=Q6CD97_YARLI Length = 324 Score = 90.9 bits (224), Expect = 6e-17 Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 2/147 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 A ++IACR + RT +EI ++ N +KKEI R E + + L Q+ + G Sbjct: 161 ATVIFIACRHANVQRTFQEIGALTN-VSKKEIRRTLELMKRLLEGTNIQAFRSTQTNPGA 219 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 M R+CS+L +N Q A++ VK+A+E RSPIS+AAA IY+ L + + Sbjct: 220 LMPRYCSHLGLNSQVANLAEDIVKRAKEIGTLDGRSPISVAAAAIYMAAALYGNDMSAQR 279 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKII 144 +S TGV++GTI+ SYK LY K++ Sbjct: 280 VSEKTGVSDGTIKTSYKHLYEAREKLV 306 [105][TOP] >UniRef100_A7E760 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7E760_SCLS1 Length = 350 Score = 90.1 bits (222), Expect = 1e-16 Identities = 61/170 (35%), Positives = 90/170 (52%), Gaps = 20/170 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSVEMG-- 417 A C++IACRQ D PRT +EI ++ +KK+IGR +++ +K ++ +G Sbjct: 170 AGCIFIACRQCDVPRTFREIYALTK-VSKKDIGRTFKALEKFFASDSSAKKARAEAVGAP 228 Query: 416 ----------TIHAGDFMRRFCSNLNM-NHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 + +A D R+CS L + + Q VK +Q +K RSP+S+AAA Sbjct: 229 ASTESYQTTTSTNAKDLCTRYCSQLGLKSQQFVKVSQGLAEKVSTVGDLAGRSPLSVAAA 288 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYA 129 IY+ + L K KDIS GV++GTIR +YK LY K+I P W A Sbjct: 289 CIYMASALLGKPKSAKDISQVAGVSDGTIRTAYKYLYADREKLIEPEWIA 338 [106][TOP] >UniRef100_A3CSQ6 Transcription initiation factor IIB n=1 Tax=Methanoculleus marisnigri JR1 RepID=TF2B_METMJ Length = 337 Score = 89.4 bits (220), Expect = 2e-16 Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++LGL+ + + D Sbjct: 196 AAALYAACRQCSVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLLPTSPI------D 248 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS LN+ + A E +++A E ++ R P +AAA IYI + L +++ ++ Sbjct: 249 YVPRFCSGLNLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQRE 308 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 309 VAEVAGVTEVTIRNRYKEL 327 [107][TOP] >UniRef100_Q0W302 Transcription initiation factor IIB n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W302_UNCMA Length = 337 Score = 89.0 bits (219), Expect = 2e-16 Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++LGL+ + + D Sbjct: 196 AAALYAACRQNGVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLMPTSPI------D 248 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS L++ + A E +++A E ++ R P +AAA IYI + L +++ ++ Sbjct: 249 YVPRFCSGLSLKGEVQSKAVEILRQAAEKELTSGRGPTGVAAAAIYISSILCGERRTQRE 308 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 309 VANVAGVTEVTIRNRYKEL 327 [108][TOP] >UniRef100_B8GJQ9 Transcription initiation factor IIB n=1 Tax=Methanosphaerula palustris E1-9c RepID=TF2B_METPE Length = 334 Score = 87.4 bits (215), Expect = 7e-16 Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++LGL+ + + D Sbjct: 193 AAALYAACRQCSVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLLPTSPI------D 245 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS L + + A E +++A E ++ R P +AAA IYI + L +++ ++ Sbjct: 246 YVPRFCSGLTLKGEVQSRAVEILRQAAERELTSGRGPTGVAAAAIYISSILGGERRTQRE 305 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 306 VAEVAGVTEVTIRNRYKEL 324 [109][TOP] >UniRef100_Q2FU09 Transcription initiation factor IIB (TFIIB) n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FU09_METHJ Length = 337 Score = 87.0 bits (214), Expect = 9e-16 Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++LGL+ + + D Sbjct: 196 AAALYAACRQCSVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLLPTSPI------D 248 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS L + + A E +++A E ++ R P +AAA IYI + L +++ ++ Sbjct: 249 YVPRFCSGLQLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQRE 308 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 309 VAEVAGVTEVTIRNRYKEL 327 [110][TOP] >UniRef100_A0B5T8 Transcription initiation factor IIB n=1 Tax=Methanosaeta thermophila PT RepID=TF2B_METTP Length = 337 Score = 87.0 bits (214), Expect = 9e-16 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACRQ + PRT+ EI V+ ++KEIGR ++ ++L L+ + + D Sbjct: 196 AAALYAACRQCNVPRTLDEIAEVSR-VSRKEIGRTYRFVSRELSLKLMPTSPI------D 248 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS LN+ E +++A E ++ R P +AAA IYI + L +D++ ++ Sbjct: 249 YIPRFCSGLNLKGDVQAKGIEILRQAAEKELTSGRGPTGVAAAAIYIASILCNDRRTQRE 308 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 309 VADVAGVTEVTIRNRYKEL 327 [111][TOP] >UniRef100_A7IAR4 Transcription initiation factor IIB n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=TF2B_METB6 Length = 334 Score = 87.0 bits (214), Expect = 9e-16 Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++LGL+ + + D Sbjct: 193 AAALYAACRQCSVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLLPTSPI------D 245 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS L + + A E +++A E ++ R P +AAA IYI + L +++ ++ Sbjct: 246 YVPRFCSGLTLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQRE 305 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 306 VAEVAGVTEVTIRNRYKEL 324 [112][TOP] >UniRef100_B5I9V2 TFIIB zinc-binding family n=1 Tax=Aciduliprofundum boonei T469 RepID=B5I9V2_9EURY Length = 313 Score = 86.7 bits (213), Expect = 1e-15 Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y ACR+ PRT+ E+ A+ KK+IGRA ++ K+L L + A Sbjct: 172 AASIYAACRKVGMPRTLDEVAK-ASELNKKKIGRAYRHLTKELNLNLKPTT------ATS 224 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ +FCS L+++ V A+E V++A E I + P +AAA IYI + ++ + K+ Sbjct: 225 YITQFCSKLHLDKNVVNKAEEIVQQATERGITSGKGPTGVAAAAIYIAANMMNEPRTQKE 284 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I+ GV E TIRN YK++ ++ IP Sbjct: 285 IAEVAGVTEVTIRNRYKEISSALNVEIP 312 [113][TOP] >UniRef100_A5UKA1 Transcription initiation factor IIB n=2 Tax=Methanobrevibacter smithii RepID=TF2B_METS3 Length = 310 Score = 86.3 bits (212), Expect = 2e-15 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACR+ + PRT+ EI V+ TKKE+GR ++ ++L ++++ D Sbjct: 169 AASLYAACRRCNVPRTLDEIAEVSR-VTKKEVGRTYRFLTREL------NIKLPPTSPVD 221 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L ++ +A A E ++KA E + R P +AAA +YI + L ++K +D Sbjct: 222 YVPRFASELGLSGEAQSRAIEIIEKAMEKGLTSGRGPTGVAAAALYIASVLLGERKTQRD 281 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 282 VADIAGVTEVTIRNRYKEL 300 [114][TOP] >UniRef100_Q46CN8 Transcription initiation factor IIB (TFIIB) n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q46CN8_METBF Length = 337 Score = 85.5 bits (210), Expect = 3e-15 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++L L+ + + D Sbjct: 196 AAALYAACRQCSVPRTLDEIEEVSR-VSRKEIGRTYRFISRELALKLMPTSPI------D 248 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS LN+ + + E +++A E ++ R P +AAA IYI + L +++ ++ Sbjct: 249 YVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQRE 308 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 309 VADVAGVTEVTIRNRYKEL 327 [115][TOP] >UniRef100_Q12XC2 Transcription initiation factor IIB n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12XC2_METBU Length = 337 Score = 85.5 bits (210), Expect = 3e-15 Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++L L+ + + D Sbjct: 196 AAALYAACRQCSVPRTLDEIGEVSR-VSRKEIGRTYRFISRELSLKLMPTSPI------D 248 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS LN+ + E +++A E ++ R P +AAA IYI + L +++ ++ Sbjct: 249 YVPRFCSGLNLKGEVQSRGVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQRE 308 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 309 VADVAGVTEVTIRNRYKEL 327 [116][TOP] >UniRef100_Q977U3 Transcription initiation factor IIB n=1 Tax=Methanosarcina mazei RepID=TF2B_METMA Length = 337 Score = 85.5 bits (210), Expect = 3e-15 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++L L+ + + D Sbjct: 196 AAALYAACRQCSVPRTLDEIEEVSR-VSRKEIGRTYRFISRELALKLMPTSPI------D 248 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS LN+ + + E +++A E ++ R P +AAA IYI + L +++ ++ Sbjct: 249 YVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQRE 308 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 309 VADVAGVTEVTIRNRYKEL 327 [117][TOP] >UniRef100_Q8TT29 Transcription initiation factor IIB n=1 Tax=Methanosarcina acetivorans RepID=TF2B_METAC Length = 337 Score = 85.5 bits (210), Expect = 3e-15 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACRQ PRT+ EI V+ ++KEIGR +I ++L L+ + + D Sbjct: 196 AAALYAACRQCSVPRTLDEIEEVSR-VSRKEIGRTYRFISRELALKLMPTSPI------D 248 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS LN+ + + E +++A E ++ R P +AAA IYI + L +++ ++ Sbjct: 249 YVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQRE 308 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 309 VADVAGVTEVTIRNRYKEL 327 [118][TOP] >UniRef100_Q4P519 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P519_USTMA Length = 375 Score = 84.3 bits (207), Expect = 6e-15 Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 20/164 (12%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE-------------- 441 AA +Y+AC+ PRT EICS+ + +KK IG+ + + + GL Sbjct: 194 AAAIYVACKMNHVPRTFPEICSLTS-VSKKHIGQCFKEMQQAFGLNATGTGSVDGSRASA 252 Query: 440 --KGQS--VEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAA 279 G S + +G A D + R+C++L + + ++ ++ + E I RSPI+IAA Sbjct: 253 NNSGTSTPIGIGPTGAADLVGRYCNHLGLEMRITRSTEDITARVRELGILAGRSPITIAA 312 Query: 278 AIIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKI 147 A IY T L K K IS A GV++ TI+NS+K+L H KI Sbjct: 313 ACIYFSTLLWGVDKGAKRISQAAGVSDVTIKNSFKELLKHKDKI 356 [119][TOP] >UniRef100_A6SQ01 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SQ01_BOTFB Length = 348 Score = 84.3 bits (207), Expect = 6e-15 Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 20/170 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSVEMGTI 411 A C++IACRQ PRT +EI ++ +KK+IGR +++ +K + G + Sbjct: 169 AGCIFIACRQCGVPRTFREIYALTK-VSKKDIGRTFKALEKFFASDSSAKKATADATGAL 227 Query: 410 ------------HAGDFMRRFCSNLNM-NHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 +A D R+CS L + + Q VK +Q +K RSP+S+AAA Sbjct: 228 AAPDGYQTTTSTNAKDLCTRYCSQLGLKSQQFVKISQGLAEKVSTVGDLAGRSPLSVAAA 287 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYA 129 IY+ + L K K+IS GV++GTIR +YK LY K+I P W A Sbjct: 288 CIYMASALLGKPKSAKEISQVAGVSDGTIRTAYKYLYADREKLIEPEWIA 337 [120][TOP] >UniRef100_C4YA24 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4YA24_CLAL4 Length = 349 Score = 84.0 bits (206), Expect = 8e-15 Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 14/162 (8%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ----------- 432 AA ++I CR+ RT KEI ++ N KKEIG+ + I+K++ EK + Sbjct: 173 AAAIFIGCRKAKVARTFKEIWALTN-VPKKEIGKVFK-IIKRVIQEKNETNPGAYSLIKD 230 Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258 S + A D +RRFCS+L ++++ AA+ ++ +E I RSPI+IAA +IY+ + Sbjct: 231 SEQTTQTSAEDLIRRFCSHLGLSNEVTNAAEYIARRCKESGILAGRSPITIAATVIYMTS 290 Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135 L + I+ TGV++GTI+ S K +Y K+I P+W Sbjct: 291 LLFGAEVTPSKIANKTGVSDGTIKTSLKVMYEDREKLIDPSW 332 [121][TOP] >UniRef100_B9W7D6 Transcription initiation factor IIB, putative (General transcription factor tfiib, putative) (Transcription factor e, putative) n=1 Tax=Candida dubliniensis CD36 RepID=B9W7D6_CANDC Length = 344 Score = 84.0 bits (206), Expect = 8e-15 Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 14/162 (8%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432 AA ++I CR+ + R+ KEI ++ N +KEIG+ + I+ ++ EK Sbjct: 171 AASIFIGCRKANVARSFKEIWALTN-VPRKEIGKVFK-IMDKIIREKNAANPNAAYYGQD 228 Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258 S++ A D +RRFCS+L +N Q A+ ++ +E + RSP +IAA +IY+ + Sbjct: 229 SIQTTQTSAEDLIRRFCSHLGVNTQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAS 288 Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135 + P IS TGV++GTI+ SYK +Y K+I P+W Sbjct: 289 LVFGFDLPPSKISDKTGVSDGTIKTSYKYMYEEKEKLIDPSW 330 [122][TOP] >UniRef100_A5DW20 Transcription initiation factor IIB n=1 Tax=Lodderomyces elongisporus RepID=A5DW20_LODEL Length = 349 Score = 84.0 bits (206), Expect = 8e-15 Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 13/169 (7%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIG---RAKEYIVKQLGLEKGQS------- 429 AA ++I CR+ R KEI ++ N KKEIG R + I+++ Q+ Sbjct: 175 AASIFIGCRKAKVARLFKEIWALTN-VPKKEIGKVFRIMDRIIQENHAANPQTAAYYSHE 233 Query: 428 -VEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258 ++ A D +RRFCS+L +N Q AA+ ++A+E + RSP +IAA +IY+ Sbjct: 234 NIQTTQTSAEDLIRRFCSHLGLNTQVTNAAEHIARRAKEVGVLAGRSPTTIAATVIYMAC 293 Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLK 111 + P IS TGV++GTI+ S+K LY K+I ++ + +K Sbjct: 294 MVFGIDMPPSKISDKTGVSDGTIKTSHKYLYEARDKLIDPYWVESGKVK 342 [123][TOP] >UniRef100_Q9HHK5 Transcription initiation factor IIB 3 n=2 Tax=Halobacterium salinarum RepID=TF2B3_HALSA Length = 317 Score = 84.0 bits (206), Expect = 8e-15 Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 2/137 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 ACLY ACRQE PRT++E+ VA +KEIGR Y+ ++L S+E+ ++ Sbjct: 179 ACLYAACRQEGIPRTLEEVTEVAR-IDQKEIGRTYRYVAQEL------SLEIQPTDPKEY 231 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RF S+L ++ + + A+E + + E + +SP AAA IY + L ++KK +++ Sbjct: 232 LPRFASDLELSEEVIAKAREIIDTSAEQGLLSGKSPSGFAAAAIYAASLLCNEKKTQREV 291 Query: 221 SIATGVAEGTIRNSYKD 171 + V E TIRN Y++ Sbjct: 292 ANVANVTEVTIRNRYQE 308 [124][TOP] >UniRef100_B2WF38 Transcription initiation factor IIB n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2WF38_PYRTR Length = 338 Score = 83.6 bits (205), Expect = 1e-14 Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 25/179 (13%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQS---------- 429 A C++IACR+ D+ R+ +EI + N +KKE+GR + V + ++K Q+ Sbjct: 156 AGCIFIACRKHDQQRSFREIFKMTN-VSKKEVGRT--FKVLEAFIQKSQNNGGPSIAGNG 212 Query: 428 VEMGTIH------------AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPI 291 + T++ A M R C+ L + Q A+E + + + RSP+ Sbjct: 213 AVIDTVNLLNQKGGTTATSASSLMPRACAKLALGTQVQMVAEECADQVAHYGVAAGRSPL 272 Query: 290 SIAAAIIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEED 117 SIA A +Y+++ L K K+I +A V++GTIR +YK ++ KII P W AK D Sbjct: 273 SIAGACLYLVSHLMGQPKSPKEIGLAVEVSDGTIRTAYKLMHMEQDKIIKPEWIAKGGD 331 [125][TOP] >UniRef100_Q75AB1 ADR007Cp n=1 Tax=Eremothecium gossypii RepID=Q75AB1_ASHGO Length = 354 Score = 83.2 bits (204), Expect = 1e-14 Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 11/156 (7%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQS---------V 426 A+ + + CR+ + RT KEI S+ N KKEIG+ I+K++ EK S + Sbjct: 177 ASVILVGCRRAEVGRTFKEILSLTN-VRKKEIGKTFN-IIKKILREKNDSGFANVDTANI 234 Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL 252 G +A F+ RFCS+L ++ Q AA+ K A++ ++ RSP++IAA+ IY+ L Sbjct: 235 STGQTNAETFIPRFCSHLGLSVQVANAAEYIAKHAKDINVLAGRSPLTIAASAIYMANLL 294 Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144 IS V EGT++ YK LY H K++ Sbjct: 295 FRYNITPSQISATLQVTEGTVKGGYKILYEHKEKVV 330 [126][TOP] >UniRef100_C5MER5 Transcription initiation factor IIB n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MER5_CANTT Length = 344 Score = 82.8 bits (203), Expect = 2e-14 Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 13/169 (7%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432 AA ++I CR+ + R+ KEI ++ N +KEIG+ + I+ ++ EK Sbjct: 171 AASIFIGCRKANVARSFKEIWALTN-VPRKEIGKVFK-IMDKIIREKNAANPNAAYYTQD 228 Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258 S+ A D +RRFCS+L +N Q A+ ++ +E + RSP +IAA +IY+ + Sbjct: 229 SISTTQTSAEDLIRRFCSHLGVNAQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAS 288 Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLK 111 + P IS TGV++GTI+ SYK +Y K+I ++ + +K Sbjct: 289 LVFGIDLPPSKISDKTGVSDGTIKTSYKYMYEEKEKLIDPYWVESGKVK 337 [127][TOP] >UniRef100_Q6KZC9 Transcription initiation factor IIB n=1 Tax=Picrophilus torridus RepID=Q6KZC9_PICTO Length = 310 Score = 82.8 bits (203), Expect = 2e-14 Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 A +Y ACR + PRT+ EI SV KKEIGR + + L L S D Sbjct: 169 AGSIYAACRITNVPRTLDEIASVTR-VKKKEIGRTYRIMARYLKLNIMPS------KPED 221 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS L ++ +A K A+E +K A + D+ + P +AAA IYI + ++ +++ + Sbjct: 222 YVNRFCSKLRLSMEARKRAEEILKMAVDNDLTSGKGPTGVAAAAIYIASLITGERRTQRA 281 Query: 224 ISIATGVAEGTIRNSYKDL 168 I+ GV E TIRN YK+L Sbjct: 282 IAEVAGVTEVTIRNRYKEL 300 [128][TOP] >UniRef100_UPI000038E008 transcription initiation factor IIB n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E008 Length = 311 Score = 82.4 bits (202), Expect = 2e-14 Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 A +Y ACR + PRT+ EI SV KKEIGR + + L L S D Sbjct: 170 AGSIYAACRITNVPRTLDEIASVTR-VKKKEIGRTYRIMARYLKLNILPS------KPDD 222 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS L ++ +A K A+E +K A + D+ + P +AAA IYI + ++ +++ + Sbjct: 223 YVNRFCSKLRLSMEARKRAEEILKMAIDNDLTSGKGPTGVAAAAIYIASLITGERRTQRA 282 Query: 224 ISIATGVAEGTIRNSYKDL 168 I+ GV E TIRN YK+L Sbjct: 283 IAEVAGVTEVTIRNRYKEL 301 [129][TOP] >UniRef100_Q7S978 Putative uncharacterized protein n=1 Tax=Neurospora crassa RepID=Q7S978_NEUCR Length = 348 Score = 82.4 bits (202), Expect = 2e-14 Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 18/163 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA---KEYIVKQLGLEKG--------- 435 A C++IACRQ PRT +EI S+ +KKEIGR E ++++G E+ Sbjct: 170 AGCIFIACRQTGVPRTFREIYSLTK-VSKKEIGRVFKQLESFLQKIGGEEHAITTSIPTF 228 Query: 434 --QSVEMGTIHAGDFMRRFCSNLNM-NHQAVK--AAQEAVKKAEEFDIR-RSPISIAAAI 273 Q G+ A + R+CSNLN N AV+ A Q A K + ++ RSP+S+AAA Sbjct: 229 NQQYQGKGSTTATELCARYCSNLNFRNSVAVEDVARQLADKTSTISELAGRSPLSVAAAC 288 Query: 272 IYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144 IY+ + + ++ + K+I+ GV++GT++ +Y+ LY K++ Sbjct: 289 IYMASHIRNESRTSKEIATVAGVSDGTVKTAYRLLYNKKDKLL 331 [130][TOP] >UniRef100_Q5AHZ3 Likely transcription factor TFIIB n=1 Tax=Candida albicans RepID=Q5AHZ3_CANAL Length = 344 Score = 82.4 bits (202), Expect = 2e-14 Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 14/162 (8%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432 AA ++I CR+ + R+ KEI ++ N +KEIG+ + I+ ++ EK Sbjct: 171 AASIFIGCRKANVARSFKEIWALTN-VPRKEIGKVFK-IMDKIIREKNAANPNAAYYGQD 228 Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258 S++ A D +RRFCS+L +N Q A+ ++ +E + RSP +IAA +IY+ + Sbjct: 229 SIQTTQTSAEDLIRRFCSHLGVNTQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAS 288 Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135 + P IS TGV++GTI+ SYK +Y ++I P+W Sbjct: 289 LVFGFDLPPSKISDKTGVSDGTIKTSYKYMYEEKEQLIDPSW 330 [131][TOP] >UniRef100_Q2H1A6 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2H1A6_CHAGB Length = 353 Score = 82.4 bits (202), Expect = 2e-14 Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 17/170 (10%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEK--------G 435 A C++IACRQ + PRT +E+ + +KKEIGR + ++ K G +K Sbjct: 171 AGCIFIACRQTNVPRTFREVYGLTK-VSKKEIGRVFKQLESFLQKMGGEDKVAKATGYSQ 229 Query: 434 QSVEMGTIHAGDFMRRFCSNLNMNHQAVK----AAQEAVKKAEEFDIR-RSPISIAAAII 270 Q G+ A + R+CSNL + AV+ A + A K +E D+ RSP+S+AAA I Sbjct: 230 QYTAKGSTTADELCIRYCSNLGFRN-AVRVESVARRLAEKSSEVSDLAGRSPLSVAAACI 288 Query: 269 YIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEE 120 Y+ + L + + K IS+ + V++GT++ +Y+ LY I+ EE Sbjct: 289 YMASHLVGEPRSTKQISVVSSVSDGTVKTAYRYLYAAKDTILTKEVFSEE 338 [132][TOP] >UniRef100_Q6KZC7 Transcription initiation factor IIB n=1 Tax=Picrophilus torridus RepID=Q6KZC7_PICTO Length = 304 Score = 82.4 bits (202), Expect = 2e-14 Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 2/138 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A +Y ACRQ + PRT+ EI A+ KK+IG+A ++ K+L L + + Sbjct: 165 AAIYAACRQVNIPRTLDEISKAAD-INKKKIGKAYRHLAKELKLNLKPTTPYS------Y 217 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + +FC+ LN++ + ++E +++ E I + P +AAA IYI +S K K+I Sbjct: 218 VSQFCNKLNLDKDVIIKSEEIIRRVNETGISAGKGPTGVAAAAIYIAAIISGKPKTQKEI 277 Query: 221 SIATGVAEGTIRNSYKDL 168 S +GV E TIRN YK++ Sbjct: 278 SKVSGVTEVTIRNRYKEI 295 [133][TOP] >UniRef100_B9ZEE4 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZEE4_NATMA Length = 320 Score = 82.0 bits (201), Expect = 3e-14 Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 + LY ACR+E PR+++EI V+ +KEIGR YI ++LGLE M + + Sbjct: 182 SALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MRPVDPKKY 234 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RFCS L ++ + A E ++K E + +SP AAA IY + L ++KK +++ Sbjct: 235 VPRFCSELELSEEVQTKANEIIEKTAEEGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 294 Query: 221 SIATGVAEGTIRNSYKD 171 + V E TIRN Y++ Sbjct: 295 ADVAQVTEVTIRNRYQE 311 [134][TOP] >UniRef100_C8S977 Transcription factor TFIIB cyclin-related protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S977_FERPL Length = 346 Score = 81.6 bits (200), Expect = 4e-14 Identities = 44/135 (32%), Positives = 79/135 (58%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y ACR+ PRT+ E+ + ++ K+ +GRA ++ + LGL+ I + D Sbjct: 207 AAAVYAACREAGLPRTLDEVAAHSS-VDKRSVGRAYRFLARTLGLKPAP------ITSTD 259 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219 ++ + C+ L ++ + + A E V +AE+ + RSP +AAA +YI + L +++ ++++ Sbjct: 260 YVPKICAALGVSGEVQERALEIVNEAEKSMVSRSPAGVAAAAVYIASILLGERRTQREVA 319 Query: 218 IATGVAEGTIRNSYK 174 GV E TIRN YK Sbjct: 320 GVAGVTEVTIRNCYK 334 [135][TOP] >UniRef100_B5IA78 TFIIB zinc-binding family n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IA78_9EURY Length = 312 Score = 81.6 bits (200), Expect = 4e-14 Identities = 52/139 (37%), Positives = 75/139 (53%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y ACR PRT++EI +V K+EIGR + + L L + D Sbjct: 171 AASIYAACRMLGIPRTLEEISTVTR-IKKREIGRVYRIMSRTLKLN------IYPTKPED 223 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS L ++ + K A E +K A E DI R P +AAA IYI L +++ ++ Sbjct: 224 YIDRFCSKLKLSGEVKKKAYEIIKMARERDIISGRGPTGVAAAAIYIAAILMGERRTQRE 283 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 284 VAEVAGVTEVTIRNRYKEL 302 [136][TOP] >UniRef100_C4YES1 Transcription initiation factor IIB n=1 Tax=Candida albicans RepID=C4YES1_CANAL Length = 344 Score = 81.3 bits (199), Expect = 5e-14 Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 14/162 (8%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432 AA ++I CR+ + R+ KEI ++ N +KEIG+ + I+ ++ EK Sbjct: 171 AASIFIGCRKANVARSFKEIWALTN-VPRKEIGKVFK-IMDKIIREKNAANPNAAYYGQD 228 Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258 S++ A D +RRFCS+L +N Q A+ ++ +E + RSP +IAA +IY+ + Sbjct: 229 SIQTTQTSAEDLIRRFCSHLGVNTQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAS 288 Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135 + P IS TGV++GTI+ SYK +Y ++I P W Sbjct: 289 LVFGFDLPPSKISDKTGVSDGTIKTSYKYMYEEKEQLIDPFW 330 [137][TOP] >UniRef100_Q701V6 Putative transcription initiation factor TFIIB n=1 Tax=uncultured crenarchaeote RepID=Q701V6_9CREN Length = 304 Score = 81.3 bits (199), Expect = 5e-14 Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 2/143 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACR + PRT+K+I +N KK++ R ++++L L+ M + Sbjct: 167 AAALYAACRDTETPRTLKDIAHASN-IKKKDVARCYRLLIRELDLK------MPVVDPVK 219 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 + R S ++ + + A E +KKAE+ I + P+ +AAA +Y+ ++ + K KD Sbjct: 220 CVARIASKSGLSEKTKRKALEILKKAEQGKISAGKDPMGLAAAALYVACVMNGENKTQKD 279 Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156 ++ A GV E TIRN YK L H+ Sbjct: 280 VAEAAGVTEVTIRNRYKGLKIHL 302 [138][TOP] >UniRef100_B5IV88 TFIIB zinc-binding family n=1 Tax=Thermococcus barophilus MP RepID=B5IV88_9EURY Length = 306 Score = 81.3 bits (199), Expect = 5e-14 Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AACLY ACR PRT+ EI VA KKEIGR+ +I ++L L + + D Sbjct: 165 AACLYAACRMAKVPRTLDEIEEVAR-VDKKEIGRSYRFIARELHLRLTPTSPI------D 217 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF L ++ + A + ++KA + + R P+ +AAA +YI + L +KK ++ Sbjct: 218 YVSRFADQLGLSERTKNRAVKILQKAIKLGLTSGRGPMGVAAAALYIASVLEGEKKTQRE 277 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ V E T+RN YK+L Sbjct: 278 VAEVAHVTEVTVRNRYKEL 296 [139][TOP] >UniRef100_O23215 Transcription initiation factor like protein n=1 Tax=Arabidopsis thaliana RepID=O23215_ARATH Length = 503 Score = 80.9 bits (198), Expect = 7e-14 Identities = 56/154 (36%), Positives = 85/154 (55%), Gaps = 6/154 (3%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 ACL A R+ +PRT++EI S+A +KEIG+ + + + L L + + ++H Sbjct: 178 ACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEALQLSQPINSNSISVH---- 232 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234 M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K Sbjct: 233 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 288 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132 +I TG+ E T+R YK+L + ++P+ Y Sbjct: 289 QAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 322 [140][TOP] >UniRef100_Q0UK00 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UK00_PHANO Length = 346 Score = 80.9 bits (198), Expect = 7e-14 Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 18/176 (10%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMG------ 417 A C++IACR + R+ +EI + N +KKE+GR + + + L+K Q V Sbjct: 171 AGCIFIACRNHGQQRSFREIFKMTN-VSKKEVGRTFKAL--EAFLQKNQKVGTASSNLLH 227 Query: 416 ---------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAII 270 T A + M R C+ L + A+E + E I RSP+SIA A++ Sbjct: 228 DTTNFQTGVTTSAENLMPRACNKLGLETYIQLVAEECARTVTEHGIAAGRSPLSIAGAVL 287 Query: 269 YIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEEDLKNL 105 Y+++ L K K+I +A V++GTIR +YK ++ +KII W + D L Sbjct: 288 YLVSHLMGTPKTPKEIGLAVEVSDGTIRTAYKLMHAQANKIIKEDWIRRGGDRSKL 343 [141][TOP] >UniRef100_B7XLP2 Transcription initiation factor IIB n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XLP2_ENTBH Length = 310 Score = 80.9 bits (198), Expect = 7e-14 Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 3/148 (2%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 AC+YIAC+ E PRT +EI SV K+EIG+ + I K++ + + + ++ DF Sbjct: 158 ACIYIACKTEGCPRTFQEI-SVITVVPKREIGKCYKLISKEMTRPESWAPQTLSV---DF 213 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPL-KD 225 + LN+N + A+ KK ++ RSP SIA+AIIY+ L D L KD Sbjct: 214 -----APLNLNAKIQNTARYIAKKVQDIGCLAGRSPDSIASAIIYLTLCLYPDFLFLQKD 268 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I T V + TIRN+YKDL P+ +IIP Sbjct: 269 IQYVTNVTDVTIRNTYKDLLPYKKEIIP 296 [142][TOP] >UniRef100_A8NYV2 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NYV2_COPC7 Length = 662 Score = 80.9 bits (198), Expect = 7e-14 Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 5/150 (3%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMG---TIH 408 AAC++IACR+ PRT +EIC++ +KK +G+ + + + L L +S+ + T Sbjct: 493 AACIFIACRKAHVPRTFREICNLTR-VSKKMLGQCYKALEQSLNLSGPESMPLANTPTTG 551 Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKP 234 + R+C++L++ E + A I RSPISIA IY L KP Sbjct: 552 PEKLLVRYCNHLDLPANVQAICSEIIVNARNHGIADGRSPISIAGGAIYFTCLLLGKPKP 611 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKII 144 +++IS GV+EGTI+ Y+ Y K++ Sbjct: 612 IREISAVAGVSEGTIKLVYRLYYNDREKLV 641 [143][TOP] >UniRef100_C5U6X1 Transcription factor TFIIB cyclin-related protein n=1 Tax=Methanocaldococcus infernus ME RepID=C5U6X1_9EURY Length = 320 Score = 80.9 bits (198), Expect = 7e-14 Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 2/143 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y ACR+ PRT+ EI V+ KKEIGR ++ ++L +++ + D Sbjct: 179 AATIYAACRKYRVPRTLDEIAEVSR-VDKKEIGRTYRFLAREL------KIKLAPTNPID 231 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L + + A + +KKA E + R P +AAA IYI + L ++ ++ Sbjct: 232 YVPRFASELGLPGEVESKAIQILKKAAEKGLTSGRGPTGVAAAAIYIASVLLGHRRTQRE 291 Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156 ++ GV E TIRN YK+L H+ Sbjct: 292 VAEVAGVTEVTIRNRYKELTEHL 314 [144][TOP] >UniRef100_Q0CNZ3 Transcription initiation factor IIB n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CNZ3_ASPTN Length = 351 Score = 80.5 bits (197), Expect = 9e-14 Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 21/181 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVK--QLGLEKGQSVEMG---- 417 A C++IACRQ + PRT +EI +V ++KEIGR + + K Q ++ Q+ + Sbjct: 171 AGCIFIACRQRNVPRTFQEIFAVTK-VSRKEIGRIYKALEKFFQAQNKERQNAVLSSGGV 229 Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQE-AVKKAEEFDIR-RSPISIAAA 276 T D RFC+ L++ +Q + A + D+ RSP+SI AA Sbjct: 230 PDPNDTYTATTTTRPSDLCNRFCNLLDLPYQVTSVSSALADHVTTKGDLAGRSPLSIVAA 289 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNLS 102 IY+ + L KP K+IS V++ TIR +YK LY +++ P W + +LKNL Sbjct: 290 CIYMASYLMGHGKPAKEISTVAHVSDSTIRGAYKQLYAKRERLVDPEWIKDGKGNLKNLP 349 Query: 101 S 99 S Sbjct: 350 S 350 [145][TOP] >UniRef100_Q3IMH4 Transcription initiation factor TFB 8 n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IMH4_NATPD Length = 325 Score = 80.5 bits (197), Expect = 9e-14 Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A LY ACR+E PR+++EI V+ +KEIGR YI ++LGLE M + + Sbjct: 187 AALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MEPVDPQKY 239 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RFCS L ++ + A++ ++ E + +SP AAA IY + L ++KK +++ Sbjct: 240 VPRFCSELELSEEVQSKAKDIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 299 Query: 221 SIATGVAEGTIRNSYKD 171 + V E TIRN Y++ Sbjct: 300 AEVAQVTEVTIRNRYQE 316 [146][TOP] >UniRef100_B6YXB2 Transcription initiation factor IIB n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YXB2_THEON Length = 303 Score = 80.5 bits (197), Expect = 9e-14 Identities = 48/148 (32%), Positives = 85/148 (57%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +A LY ACR E PRT+ EI +V+ TKKEIGR+ ++ + LGL + + + Sbjct: 162 SAALYAACRMEGIPRTLDEIAAVSK-VTKKEIGRSYRFLARGLGLNLRPTSPI------E 214 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF +L+++ + K A+E +++A + I + P +AAA +Y+ + L +KK ++ Sbjct: 215 YIDRFGDSLDVSQRTKKRAKEILQEAIKRGITSGKGPTGLAAAALYVASLLEGEKKTQRE 274 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 ++ V E T+RN YK+L + +P Sbjct: 275 VAEVAHVTEVTVRNRYKELVEKLGINVP 302 [147][TOP] >UniRef100_Q93YB0 TFIIB-related protein (Fragment) n=1 Tax=Spinacia oleracea RepID=Q93YB0_SPIOL Length = 414 Score = 80.1 bits (196), Expect = 1e-13 Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 6/154 (3%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 ACL A R+ +PRT++EI S+A +KEIG+ + + + L L + + +H Sbjct: 171 ACLVQAIREAQEPRTLQEI-SIAANLPQKEIGKYIKILGEALQLSQPINSNSIAVH---- 225 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234 M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K Sbjct: 226 MPRFCNLLQLN----KSAQELATHIGEVVMNKCFCTRRNPISISAAAIYLACQLEDRRKT 281 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132 +I TG+ E T+R YK+L + ++P+ Y Sbjct: 282 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY 315 [148][TOP] >UniRef100_Q6Z467 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6Z467_ORYSJ Length = 362 Score = 80.1 bits (196), Expect = 1e-13 Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 13/121 (10%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVAN--GATKKEIGRAKEYIVKQLGLEK---GQSVEMGT 414 AACL+ ACR E PRT+KE+ + + ATK+++G+ I + LG+E+ Q+ +M Sbjct: 182 AACLHAACRVEGAPRTLKELIAATSDAAATKRDLGKFINAIKRHLGMEERGQDQAADMKA 241 Query: 413 --------IHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIIT 258 + AGD++ R+ S + M+ Q AA+ A + + D+RR+P SIAAAI+Y+ Sbjct: 242 SGGGVGVVVRAGDYLHRYGSAVGMSGQEASAARRAAGRLDSLDVRRNPQSIAAAIVYMAA 301 Query: 257 Q 255 Q Sbjct: 302 Q 302 [149][TOP] >UniRef100_Q18KT7 Transcription initiation factor TFB n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18KT7_HALWD Length = 329 Score = 80.1 bits (196), Expect = 1e-13 Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 + LY ACR+E PR+++EI V+ +KEIGR YI ++LGLE M + + Sbjct: 191 SALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MRPVDPKKY 243 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RFCS L+++ + A E ++ E + +SP AAA IY + L ++KK +++ Sbjct: 244 VPRFCSELDLSKEVQSKADEIIETTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 303 Query: 221 SIATGVAEGTIRNSYKD 171 + V E TIRN Y++ Sbjct: 304 ADVAQVTEVTIRNRYQE 320 [150][TOP] >UniRef100_C7NMT2 Transcription factor TFIIB cyclin-related n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NMT2_HALUD Length = 321 Score = 80.1 bits (196), Expect = 1e-13 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 + LY ACR+E PR+++EI V+ +KEIGR YI ++LGLE M + + Sbjct: 183 SALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MEPVDPKKY 235 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RFCS L ++ + A E ++ E + +SP AAA IY + L ++KK +++ Sbjct: 236 VPRFCSELELSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 295 Query: 221 SIATGVAEGTIRNSYKD 171 + V E TIRN Y++ Sbjct: 296 ADVAQVTEVTIRNRYQE 312 [151][TOP] >UniRef100_O26971 Transcription initiation factor IIB n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=TF2B_METTH Length = 310 Score = 80.1 bits (196), Expect = 1e-13 Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACR+ + PRT+ EI V+ +KKE+GR ++ ++L ++++ D Sbjct: 169 AASLYAACRKCNVPRTLDEIAEVSR-VSKKEVGRTYRFLTREL------NIKLPPTSPVD 221 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L ++ + A E ++ A E + R P +AAA +YI + L + K +D Sbjct: 222 YVPRFASELGLSGEVQSKAIEIIEMAMENGLTSGRGPTGVAAAALYIASVLLGEHKTQRD 281 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 282 VAEVAGVTEVTIRNRYKEL 300 [152][TOP] >UniRef100_B3T9W7 Putative transcription factor TFIIB repeat protein n=1 Tax=uncultured marine microorganism HF4000_APKG7N23 RepID=B3T9W7_9ZZZZ Length = 242 Score = 79.7 bits (195), Expect = 1e-13 Identities = 53/139 (38%), Positives = 75/139 (53%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACR+ + PRT+ EI A+ A+KKE+GR YI ++L L + Sbjct: 101 AAALYGACRRCEVPRTLSEITE-ASRASKKEVGRTYRYISRELKLN------LQPASPAV 153 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFC L + AA + +A E ++ R P +AAA IYI + + D +K K Sbjct: 154 YIIRFCRELELPGYVESAAINILNQAIEAELTSGRGPTGVAAAAIYIASVVYDQRKTQKT 213 Query: 224 ISIATGVAEGTIRNSYKDL 168 I+ GV E TIRN YK+L Sbjct: 214 IADTVGVTEVTIRNRYKEL 232 [153][TOP] >UniRef100_Q9HSF7 Transcription initiation factor IIB 7 n=2 Tax=Halobacterium salinarum RepID=TF2B7_HALSA Length = 323 Score = 79.7 bits (195), Expect = 1e-13 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 + LY ACR+E PR+++EI V+ +KEIGR YI ++LGLE M + + Sbjct: 185 SALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MKPVDPKKY 237 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RFCS L + + A E ++ E + +SP AAA IY + L ++KK +++ Sbjct: 238 VPRFCSELELTEEVQSKANEIIETTAEEGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 297 Query: 221 SIATGVAEGTIRNSYKD 171 + V E TIRN Y++ Sbjct: 298 ADVAQVTEVTIRNRYQE 314 [154][TOP] >UniRef100_C5G9X7 Transcription initiation factor IIB n=2 Tax=Ajellomyces dermatitidis RepID=C5G9X7_AJEDR Length = 352 Score = 79.3 bits (194), Expect = 2e-13 Identities = 62/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417 A C++IACRQ PRT EI +V TKKEIGR A E LE+ SV Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230 Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 + D RFC+ L++ Q + + RSP+SI AA Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGDLAGRSPLSIVAA 290 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105 IY+ + L K K+IS V++GTIR +YK LY ++I P W + D+KNL Sbjct: 291 SIYMASFLMGQGKSAKEISSVAHVSDGTIRGAYKQLYAERERLIDPAWIKDGKGDMKNL 349 [155][TOP] >UniRef100_A3DNM2 Transcription initiation factor IIB (TFIIB) n=1 Tax=Staphylothermus marinus F1 RepID=A3DNM2_STAMF Length = 309 Score = 79.3 bits (194), Expect = 2e-13 Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 2/149 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y ACR+ PRT+ EI +++K+I R ++K+L +++ T D Sbjct: 167 AAAIYAACRELKIPRTLDEIAKHTK-SSRKDIARCYRLLLKEL------DIKVQTSDPID 219 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 F+ R LN++ +K A E + +A + P +AAA +YI QLS +++ K+ Sbjct: 220 FIPRIAHALNLSGSVMKKAAEILHRARSLGVTAGNDPAGLAAAAVYIAAQLSGERRTQKE 279 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 I+ GV E T+RN YK+L + +PT Sbjct: 280 IAHVAGVTEVTVRNRYKELAKELGIDLPT 308 [156][TOP] >UniRef100_Q05959 Transcription initiation factor IIB n=1 Tax=Kluyveromyces lactis RepID=TF2B_KLULA Length = 357 Score = 79.3 bits (194), Expect = 2e-13 Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 11/156 (7%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ---------SV 426 A+ + + CR+ + R+ KEI S+ N KKEIG+ I+K + EK ++ Sbjct: 177 ASVILVGCRRAEVGRSFKEILSLTN-VRKKEIGKTFT-IIKNILREKNDRGFANIDTSNI 234 Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL 252 G A F+ RFCS+L ++ Q AA+ K +++ ++ RSPI+IAAA IY+ T L Sbjct: 235 TTGQTSAETFIPRFCSHLGLSVQVANAAEYIAKHSKDVNVLAGRSPITIAAAAIYMATLL 294 Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144 IS V EGT++ YK LY H K++ Sbjct: 295 FKLNISPTRISQTLQVTEGTVKGGYKALYEHKEKVV 330 [157][TOP] >UniRef100_C0S3L3 Transcription initiation factor IIB n=3 Tax=Paracoccidioides brasiliensis RepID=C0S3L3_PARBP Length = 352 Score = 79.0 bits (193), Expect = 3e-13 Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417 A C++IACRQ PRT EI +V TKKEIGR A E LE+ SV Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230 Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 + D RFC+ L++ Q + + RSP+SI AA Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGELAGRSPLSIVAA 290 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105 IY+ + L K K+IS V++GTIR +YK +Y ++I P W + D+KNL Sbjct: 291 SIYMASFLMGQGKSAKEISTVAHVSDGTIRGAYKQIYAERERLIDPAWIKDGKGDMKNL 349 [158][TOP] >UniRef100_A6RGN6 Transcription initiation factor IIB n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6RGN6_AJECN Length = 352 Score = 79.0 bits (193), Expect = 3e-13 Identities = 62/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417 A C++IACRQ PRT EI +V TKKEIGR A E LE+ SV Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230 Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 + D RFC+ L++ Q + + RSP+SI AA Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGELAGRSPLSIVAA 290 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105 IY+ + L K K+IS V++GTIR +YK LY ++I P W + DL+NL Sbjct: 291 SIYMASFLMGQGKTAKEISSVAHVSDGTIRGAYKQLYAERERLIDPAWIKDGKGDLRNL 349 [159][TOP] >UniRef100_O58594 208aa long hypothetical transcription initiation factor IIB n=1 Tax=Pyrococcus horikoshii RepID=O58594_PYRHO Length = 208 Score = 79.0 bits (193), Expect = 3e-13 Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AAC+YI+CR PRT+ EI VA KK I R +VK+LGL + I Sbjct: 67 AACIYISCRLYKVPRTLDEIAKVAK-EDKKVIARVYRLVVKKLGLSSKDML----IRPEY 121 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ +F L ++ + + A + +A++ I ++P+ +AA+I+YI + L +++ K+ Sbjct: 122 YIDKFADELEVSERVKRRALRLLNEAKDKGITSGKNPLGLAASILYIASLLEGERRTQKE 181 Query: 224 ISIATGVAEGTIRNSYKDL 168 I+ G+ E TIRN YK+L Sbjct: 182 IARVAGITEVTIRNRYKEL 200 [160][TOP] >UniRef100_C6A4U9 Transcription initiation factor IIB 2 n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A4U9_THESM Length = 272 Score = 79.0 bits (193), Expect = 3e-13 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 2/149 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +ACLY ACR + PRT+ EI + KKEIGR+ Y+V++L L+ + + D Sbjct: 131 SACLYAACRIANAPRTLDEIEDFSK-VDKKEIGRSYRYLVRELNLK------LRPTNPVD 183 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF L + + + A V +A + + + P IAAA IYI + L +K ++ Sbjct: 184 YVVRFGDQLGVTEKTKRRAMRIVNQAIKMGLTSGKGPTGIAAAAIYIASLLEGEKMTQRE 243 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 ++ V E T+RN YK+L ++ IPT Sbjct: 244 VAEVARVTEVTVRNRYKELVDKLNIRIPT 272 [161][TOP] >UniRef100_Q6M176 Transcription initiation factor IIB n=1 Tax=Methanococcus maripaludis RepID=TF2B_METMP Length = 339 Score = 79.0 bits (193), Expect = 3e-13 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACR+ PRT+ EI V+ +KEIGR +I ++L ++ + + D Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 250 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L + + A ++KA E + R P +AAA IYI + L ++ ++ Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGERGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 310 Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156 ++ GV E TIRN YK+L H+ Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333 [162][TOP] >UniRef100_A6VI28 Transcription initiation factor IIB n=1 Tax=Methanococcus maripaludis C7 RepID=TF2B_METM7 Length = 339 Score = 79.0 bits (193), Expect = 3e-13 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACR+ PRT+ EI V+ +KEIGR +I ++L ++ + + D Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 250 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L + + A ++KA E + R P +AAA IYI + L ++ ++ Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGEKGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 310 Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156 ++ GV E TIRN YK+L H+ Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333 [163][TOP] >UniRef100_A9A8Q0 Transcription initiation factor IIB n=1 Tax=Methanococcus maripaludis C6 RepID=TF2B_METM6 Length = 339 Score = 79.0 bits (193), Expect = 3e-13 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACR+ PRT+ EI V+ +KEIGR +I ++L ++ + + D Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 250 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L + + A ++KA E + R P +AAA IYI + L ++ ++ Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGEKGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 310 Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156 ++ GV E TIRN YK+L H+ Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333 [164][TOP] >UniRef100_A4G0F2 Transcription initiation factor IIB n=1 Tax=Methanococcus maripaludis C5 RepID=TF2B_METM5 Length = 339 Score = 79.0 bits (193), Expect = 3e-13 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACR+ PRT+ EI V+ +KEIGR +I ++L ++ + + D Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 250 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L + + A ++KA E + R P +AAA IYI + L ++ ++ Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGEKGLTSSRGPTGVAAAAIYIASVLQGTRRTQRE 310 Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156 ++ GV E TIRN YK+L H+ Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333 [165][TOP] >UniRef100_Q6BPC4 DEHA2E14762p n=1 Tax=Debaryomyces hansenii RepID=Q6BPC4_DEBHA Length = 346 Score = 78.6 bits (192), Expect = 3e-13 Identities = 53/170 (31%), Positives = 94/170 (55%), Gaps = 14/170 (8%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432 AA ++I CR+ R+ KEI ++ N +KEIG+ + I+ ++ EK Sbjct: 173 AAAIFIGCRKAKVARSFKEIWALTN-VPRKEIGKVFK-IMNKIIQEKNAANPNAYSLIQD 230 Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258 +++ A D +RRFCS+L ++ Q AA+ ++ ++ + RSPI+IAA +IY+ Sbjct: 231 NMQTTQTSAEDLIRRFCSHLGLSTQVTNAAEHIARRCKDVGVLAGRSPITIAATVIYMAA 290 Query: 257 QL-SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLK 111 + D +P K I+ TGV++GTI+ SYK +Y ++I ++ + +K Sbjct: 291 LVFGADLQPSK-IADKTGVSDGTIKTSYKVMYEEKERLIDPYWVESGKVK 339 [166][TOP] >UniRef100_C6HRH5 Transcription initiation protein n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HRH5_AJECH Length = 352 Score = 78.6 bits (192), Expect = 3e-13 Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417 A C++IACRQ PRT EI +V TKKEIGR A E LE+ SV Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230 Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 + D RFC+ L++ Q + + RSP+SI AA Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGELAGRSPLSIVAA 290 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105 IY+ + L K K+IS V++GTIR +YK LY +++ P W + DL+NL Sbjct: 291 SIYMASFLMGQGKTAKEISSVAHVSDGTIRGAYKQLYAERERLVDPAWIKDGKGDLRNL 349 [167][TOP] >UniRef100_C0NUV9 Transcription initiation protein n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0NUV9_AJECG Length = 352 Score = 78.6 bits (192), Expect = 3e-13 Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417 A C++IACRQ PRT EI +V TKKEIGR A E LE+ SV Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230 Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 + D RFC+ L++ Q + + RSP+SI AA Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGELAGRSPLSIVAA 290 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105 IY+ + L K K+IS V++GTIR +YK LY +++ P W + DL+NL Sbjct: 291 SIYMASFLMGQGKTAKEISSVAHVSDGTIRGAYKQLYAERERLVDPAWIKDGKGDLRNL 349 [168][TOP] >UniRef100_B9WLX5 Transcription initiation factor IIB, putative (General transcription facto tfiib, putative) n=1 Tax=Candida dubliniensis CD36 RepID=B9WLX5_CANDC Length = 346 Score = 78.6 bits (192), Expect = 3e-13 Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 13/161 (8%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATK---KEIGRAKEYIVKQLGLEKG------QSV 426 AA + + CR+ D PRT++EI ++ N TK K G K+ I L E ++ Sbjct: 172 AAAILLGCRRADVPRTLEEIRALTNVPTKQIAKVTGLIKKIIRSHLNNEDASTSIVDETS 231 Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ- 255 + T A D +RRFCS+L ++ A++ +K + + RSP +IAA I++ + Sbjct: 232 SLTTHSAEDLIRRFCSHLGLSLTITSASEYVARKCHDLGVLAGRSPTTIAATSIFLAAKS 291 Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135 L D K + I TGV+ GTI+NSYK L + +I P W Sbjct: 292 LGDTKLTQQQIRDKTGVSIGTIKNSYKILQENAKDLIDPAW 332 [169][TOP] >UniRef100_B0CXM4 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CXM4_LACBS Length = 349 Score = 78.6 bits (192), Expect = 3e-13 Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 6/151 (3%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402 AAC++IACRQ PRT +EIC + + +KK +G+ + + + L G S + + Sbjct: 179 AACIFIACRQAHVPRTFREICDLTH-VSKKILGQCYKALEQAFNLTPGASAAHASNNPAT 237 Query: 401 ---DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKK 237 + + R+C++L++ + + A + I RSP+SIA IY L K Sbjct: 238 GPENLLVRYCNHLDLPPNVQSICSDIIVAARKHGIADGRSPVSIAGGAIYFTCYLLGKNK 297 Query: 236 PLKDISIATGVAEGTIRNSYKDLYPHVSKII 144 +DIS GV+EGTIR Y+ Y K++ Sbjct: 298 SPRDISAVAGVSEGTIRLVYRLYYAEKEKLV 328 [170][TOP] >UniRef100_A4RNY3 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4RNY3_MAGGR Length = 371 Score = 78.6 bits (192), Expect = 3e-13 Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 24/161 (14%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSV----- 426 A C++IACR E PRT +EI ++ N +KKEIGR +EY+ K +G + Sbjct: 173 AGCIFIACRMEKVPRTFREIHALTN-VSKKEIGRTYKALEEYVKKVNYENRGGAAAVDHK 231 Query: 425 ---------EMGT--IHAGDFMRRFCSNLN--MNHQAVKAAQEAVKKAEEF-DIR-RSPI 291 +M T A R+CS L ++H A + A +K+ D+ RSP+ Sbjct: 232 MPTADDDDDDMATKGTTAESLCTRYCSILGFRVSHLAERVAMHLARKSSSVADLAGRSPL 291 Query: 290 SIAAAIIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDL 168 S+AAA IY+++ L + + KDI++ GV++GTI+ +YK L Sbjct: 292 SVAAACIYMMSHLIGEPRTSKDIAVVAGVSDGTIKTAYKFL 332 [171][TOP] >UniRef100_Q8U2Z1 Transcription initiation factor IIB chain b homolog n=1 Tax=Pyrococcus furiosus RepID=Q8U2Z1_PYRFU Length = 283 Score = 78.6 bits (192), Expect = 3e-13 Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AAC+Y CR PRT+ EI S + KKEI +A IV+ L L + T D Sbjct: 139 AACIYATCRLFKVPRTLNEIASYSK-TEKKEIMKAFRVIVRNLNLTPKMLLARPT----D 193 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ +F L ++ + + + +++A E I ++P+S+ AA +YI + L +++ K+ Sbjct: 194 YVDKFADELELSERVRRRTVDILRRANEEGITSGKNPLSLVAAALYIASLLEGERRSQKE 253 Query: 224 ISIATGVAEGTIRNSYKDL 168 I+ TGV+E T+RN YK+L Sbjct: 254 IARVTGVSEMTVRNRYKEL 272 [172][TOP] >UniRef100_A6UR19 Transcription factor TFIIB cyclin-related n=1 Tax=Methanococcus vannielii SB RepID=A6UR19_METVS Length = 339 Score = 78.6 bits (192), Expect = 3e-13 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACR+ PRT+ EI V+ +KEIGR +I ++L ++ + + D Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPID 250 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L + + A ++KA E + R P +AAA IYI + L ++ ++ Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGERGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 310 Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156 ++ GV E TIRN YK+L H+ Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333 [173][TOP] >UniRef100_Q2NEL6 Transcription initiation factor IIB n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=TF2B_METST Length = 311 Score = 78.6 bits (192), Expect = 3e-13 Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACR+ PRT+ EI V+ +KKE+GR ++ ++L + + + D Sbjct: 170 AASLYAACRRCKVPRTLDEIADVSR-VSKKEVGRTYRFLTRELHIRLPPTSPI------D 222 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S LN++ A E + +A + + R P +AAA +YI + L ++K +D Sbjct: 223 YVPRFASELNLSGVVQSKAIEIINQAMDNGLTSGRGPTGVAAAALYIASVLLGERKTQRD 282 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 283 VADIAGVTEVTIRNRYKEL 301 [174][TOP] >UniRef100_Q9FYX3 BAC19.3 n=1 Tax=Solanum lycopersicum RepID=Q9FYX3_SOLLC Length = 425 Score = 78.2 bits (191), Expect = 4e-13 Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 6/154 (3%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A L A R+ +PRT++EI SVA +KEIG+ + + + L L + + ++H Sbjct: 178 AALVHAIREAQEPRTLQEI-SVAANLPQKEIGKYIKILGEALQLSQPINSNSISVH---- 232 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234 M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K Sbjct: 233 MPRFCTLLQLN----KSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKT 288 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132 +I TG+ E T+R YK+L + ++P+ Y Sbjct: 289 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSSY 322 [175][TOP] >UniRef100_Q93WQ2 TFIIB-related protein (Fragment) n=1 Tax=Zea mays RepID=Q93WQ2_MAIZE Length = 469 Score = 78.2 bits (191), Expect = 4e-13 Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 6/154 (3%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A L A R+ +PRT++EI S A+ +KEIG+ + + + L L + + +H Sbjct: 131 AALVQAIREAQQPRTLQEI-STASNLPQKEIGKYIKILGESLKLSQPLNSNSIAVH---- 185 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234 M RFCS L +N K+AQE E F RR+PISI+AA IY+ QL D +K Sbjct: 186 MPRFCSLLQLN----KSAQELAAHIGEVVANKCFCTRRNPISISAAAIYLACQLEDKRKT 241 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132 +I TG+ E T+R YK+L + ++P Y Sbjct: 242 QAEICKVTGLTEVTLRKVYKELLENWDDLLPPDY 275 [176][TOP] >UniRef100_C5WUN9 Putative uncharacterized protein Sb01g044030 n=1 Tax=Sorghum bicolor RepID=C5WUN9_SORBI Length = 533 Score = 78.2 bits (191), Expect = 4e-13 Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 6/154 (3%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A L A R+ +PRT++EI S A+ +KEIG+ + + + L L + + +H Sbjct: 194 AALVQAIREAQQPRTLQEI-STASNLPQKEIGKYIKILGESLKLSQPLNSNSIAVH---- 248 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234 M RFCS L +N K+AQE E F RR+PISI+AA IY+ QL D +K Sbjct: 249 MPRFCSLLQLN----KSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKT 304 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132 +I TG+ E T+R YK+L + ++P Y Sbjct: 305 QAEICKVTGLTEVTLRKVYKELLENWDDLLPPDY 338 [177][TOP] >UniRef100_B9VXZ5 Transcription factor IIB n=1 Tax=Capsicum annuum RepID=B9VXZ5_CAPAN Length = 426 Score = 78.2 bits (191), Expect = 4e-13 Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 6/154 (3%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A L A R+ +PRT++EI SVA +KEIG+ + + + L L + + ++H Sbjct: 179 AALVHAIREAQEPRTLQEI-SVAANLPQKEIGKYIKILGEALQLSQPINSNSISVH---- 233 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234 M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K Sbjct: 234 MPRFCTLLQLN----KSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKT 289 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132 +I TG+ E T+R YK+L + ++P+ Y Sbjct: 290 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSSY 323 [178][TOP] >UniRef100_A9XLD7 Putative uncharacterized protein n=1 Tax=Capsicum frutescens RepID=A9XLD7_CAPFR Length = 426 Score = 78.2 bits (191), Expect = 4e-13 Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 6/154 (3%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A L A R+ +PRT++EI SVA +KEIG+ + + + L L + + ++H Sbjct: 179 AALVHAIREAQEPRTLQEI-SVAANLPQKEIGKYIKILGEALQLSQPINSNSISVH---- 233 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234 M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K Sbjct: 234 MPRFCTLLQLN----KSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKT 289 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132 +I TG+ E T+R YK+L + ++P+ Y Sbjct: 290 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSSY 323 [179][TOP] >UniRef100_A3AF39 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=A3AF39_ORYSJ Length = 501 Score = 78.2 bits (191), Expect = 4e-13 Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 6/154 (3%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A L A R+ +PRT++EI S A+ +KEIG+ + + + L L + + +H Sbjct: 169 AALVQAIREAQEPRTLQEI-STASNLPQKEIGKYIKILGESLKLSQPLNSNSIAVH---- 223 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234 M RFCS L +N K+AQE E F RR+PISI+AA IY+ QL D +K Sbjct: 224 MPRFCSLLQLN----KSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKT 279 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132 +I TG+ E T+R YK+L + ++P Y Sbjct: 280 QAEICKVTGLTEVTLRKVYKELLENWDDLLPPNY 313 [180][TOP] >UniRef100_A2XDJ3 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2XDJ3_ORYSI Length = 529 Score = 78.2 bits (191), Expect = 4e-13 Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 6/154 (3%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A L A R+ +PRT++EI S A+ +KEIG+ + + + L L + + +H Sbjct: 197 AALVQAIREAQEPRTLQEI-STASNLPQKEIGKYIKILGESLKLSQPLNSNSIAVH---- 251 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234 M RFCS L +N K+AQE E F RR+PISI+AA IY+ QL D +K Sbjct: 252 MPRFCSLLQLN----KSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKT 307 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132 +I TG+ E T+R YK+L + ++P Y Sbjct: 308 QAEICKVTGLTEVTLRKVYKELLENWDDLLPPNY 341 [181][TOP] >UniRef100_Q59K82 Transcription initiation factor IIB n=1 Tax=Candida albicans RepID=Q59K82_CANAL Length = 346 Score = 78.2 bits (191), Expect = 4e-13 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 13/166 (7%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATK---KEIGRAKEYIVKQLGLEKG------QSV 426 AA + + CR+ D PRT++EI ++ N TK K G K+ I L + ++ Sbjct: 172 AATILLGCRRADVPRTLEEIRALTNVPTKQIAKVTGLIKKIIRSHLNNDDASTSIVDETS 231 Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ- 255 + T A D +RRFCS+L ++ A++ +K + + RSP +IAA I++ + Sbjct: 232 SLTTHSAEDLIRRFCSHLGLSLAITSASEYVARKCHDLGVLAGRSPTTIAATSIFLAAKS 291 Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEE 120 L D K + I TGV+ GTI+NSYK L + +I P W A + Sbjct: 292 LGDTKLTQQQIRDKTGVSIGTIKNSYKILQENAKDLIDPAWEANSK 337 [182][TOP] >UniRef100_UPI0001983170 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001983170 Length = 540 Score = 77.8 bits (190), Expect = 6e-13 Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 6/154 (3%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A L A R+ +PRT++EI S+A +KEIG+ + + + L L + + ++H Sbjct: 198 AALVQAIREAQEPRTLQEI-SIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH---- 252 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234 M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K Sbjct: 253 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 308 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132 +I TG+ E T+R YK+L + ++P+ Y Sbjct: 309 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY 342 [183][TOP] >UniRef100_B9S6G3 RNA polymerase II transcription factor, putative n=1 Tax=Ricinus communis RepID=B9S6G3_RICCO Length = 511 Score = 77.8 bits (190), Expect = 6e-13 Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 6/154 (3%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A L A R+ +PRT++EI S+A +KEIG+ + + + L L + + ++H Sbjct: 178 AALVQAIREAQEPRTLQEI-SIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH---- 232 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234 M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K Sbjct: 233 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 288 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132 +I TG+ E T+R YK+L + ++P+ Y Sbjct: 289 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY 322 [184][TOP] >UniRef100_A7PUX2 Chromosome chr4 scaffold_32, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7PUX2_VITVI Length = 523 Score = 77.8 bits (190), Expect = 6e-13 Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 6/154 (3%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A L A R+ +PRT++EI S+A +KEIG+ + + + L L + + ++H Sbjct: 181 AALVQAIREAQEPRTLQEI-SIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH---- 235 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234 M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K Sbjct: 236 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 291 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132 +I TG+ E T+R YK+L + ++P+ Y Sbjct: 292 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY 325 [185][TOP] >UniRef100_C5P9R2 Transcription initiation factor IIB, putative n=2 Tax=Coccidioides RepID=C5P9R2_COCP7 Length = 353 Score = 77.8 bits (190), Expect = 6e-13 Identities = 60/179 (33%), Positives = 83/179 (46%), Gaps = 21/179 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417 A C++IACRQ PRT EI ++ +KKEIGR A E LE+ SV Sbjct: 173 AGCIFIACRQCKVPRTFTEIFALTR-VSKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 231 Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 + D RFC+ L++ Q + + RSP+SI AA Sbjct: 232 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSMGDLAGRSPLSIVAA 291 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105 IY+ + L K K+IS V++GTIR +YK LY ++I P W + D+KNL Sbjct: 292 SIYMASFLMGQGKSAKEISAVAHVSDGTIRGAYKQLYAERERLIDPAWIKDGKGDMKNL 350 [186][TOP] >UniRef100_C5M3D9 Transcription initiation factor IIB n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M3D9_CANTT Length = 347 Score = 77.8 bits (190), Expect = 6e-13 Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 13/161 (8%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKK--EIGRA-KEYIVKQLGLEKG------QSV 426 A+ + + CR+ + PRT++EI ++ N TK+ +I R K+ I L + ++ Sbjct: 173 ASTILLGCRRAEVPRTLEEIRALTNVPTKQIAKITRLIKKIIHSHLNSDDAAAAIVDETT 232 Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ- 255 + T A D +RRFCS+L +N ++ +K E I RSP +IAA IY+ + Sbjct: 233 NLTTHSAEDLIRRFCSHLGLNPIITNGSEYIARKCNELGILAGRSPTTIAATSIYLAAKV 292 Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135 L D K + I TGV+ GTI+NSYK LY +++ P+W Sbjct: 293 LGDTKLTQQQIRDKTGVSIGTIKNSYKILYEKARELVDPSW 333 [187][TOP] >UniRef100_C5DJ37 KLTH0F13200p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DJ37_LACTC Length = 359 Score = 77.8 bits (190), Expect = 6e-13 Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 11/178 (6%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQS----VEMGTI 411 A+ + + CR+ + R+ KEI S+ N KKEIG+ I+K + EK + ++ TI Sbjct: 177 ASVILVGCRRAEVGRSFKEILSLTN-VKKKEIGKTFT-IIKSILREKNANGFANIDTATI 234 Query: 410 HAGD-----FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL 252 +G F+ RFCS+L ++ Q AA+ K ++ ++ +SPI+IAA+ IY+ QL Sbjct: 235 SSGQTSAETFIPRFCSHLGLSVQIANAAEYTAKHCKDINVLAGKSPITIAASAIYLAIQL 294 Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP*IIEKN 78 +S V EGTI+ YK LY K++ + S P + +KN Sbjct: 295 FKVNISASQVSHTLQVTEGTIKGGYKILYEFRDKVVDPQLIASGKISFDSLPKVNDKN 352 [188][TOP] >UniRef100_C4QVZ4 Transcription factor TFIIB, a general transcription factor n=1 Tax=Pichia pastoris GS115 RepID=C4QVZ4_PICPG Length = 342 Score = 77.8 bits (190), Expect = 6e-13 Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 13/161 (8%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL--------GLEKGQSVE 423 AA + +ACR+ + PR+ KE+ ++ + K EIG+ + I K + GL Q+ Sbjct: 169 AAAIGLACRKANVPRSFKELWALTD-VPKNEIGKVFKIIHKLIQQKHALAGGLLNVQNES 227 Query: 422 MGTI--HAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ 255 + T +A + RFCSNL ++ Q AA+ ++ +E + RSP+++AA +IY+ Sbjct: 228 IATTQTNAEALIGRFCSNLGLSRQITNAAEYIARRTKEVGVLAGRSPVTVAATVIYMAAS 287 Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135 + D I+ GV++GTI+ SYK LY +++ P W Sbjct: 288 IFDASISPAQIAQRAGVSDGTIKTSYKYLYDKREELVDPQW 328 [189][TOP] >UniRef100_B6Q1D2 Transcription initiation protein n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6Q1D2_PENMQ Length = 341 Score = 77.8 bits (190), Expect = 6e-13 Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 12/157 (7%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402 A C++IACRQ PRT EI +V ++KEIGR + + K + + + AG Sbjct: 168 AGCIFIACRQCQAPRTFSEIFAVTK-VSRKEIGRIYKSLEKFFTAQNIERTAVVGADAGF 226 Query: 401 ---------DFMRRFCSNLNMNHQAVKAAQEAVKKA-EEFDIR-RSPISIAAAIIYIITQ 255 D RF S L ++++ +A + + ++ D+ RSP+SI AA +Y+++ Sbjct: 227 KQTTSTKPSDLCERFGSFLGLDYRTWHSAADLSDRVTKDGDLAGRSPLSIVAACLYMVSH 286 Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144 L K K+IS GV++GTIR +YK LY ++I Sbjct: 287 LCGVPKSAKEISAVVGVSDGTIRGAYKQLYAERDRLI 323 [190][TOP] >UniRef100_B0XXT9 Transcription initiation protein n=2 Tax=Aspergillus fumigatus RepID=B0XXT9_ASPFC Length = 422 Score = 77.8 bits (190), Expect = 6e-13 Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 21/179 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402 A C++IACRQ PRT EI +V T+KEIGR + + K + + + G Sbjct: 242 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTAQNLERINAVVSSGGV 300 Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 D RFC+ L++ +Q + + RSP+SI AA Sbjct: 301 PDPNDTYTATTSTKPSDLCNRFCNLLDLPYQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 360 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105 IY+ + L K K+IS V++GTIR +YK LY ++I P W + D+KNL Sbjct: 361 CIYMASYLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDMKNL 419 [191][TOP] >UniRef100_A3LYP5 Predicted protein n=1 Tax=Pichia stipitis RepID=A3LYP5_PICST Length = 350 Score = 77.8 bits (190), Expect = 6e-13 Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 13/161 (8%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG----------QS 429 AA ++I CR+ R+ KEI ++ N +KEIG+ + I K + + + Sbjct: 177 AAAIFIGCRKAKVARSFKEIWALTN-VPRKEIGKVFKIIDKVIQEKNAANPNALMFNQDN 235 Query: 428 VEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ 255 ++ A D +RR CS+L +N Q A+ ++ +E + RSP +IAA +IY+ Sbjct: 236 MQTTQTTAEDLIRRNCSHLGLNAQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAAL 295 Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135 + P IS TGV++GTI+ SYK +Y K+I P W Sbjct: 296 VFGIDLPPSKISDKTGVSDGTIKTSYKVMYEEKEKLIDPYW 336 [192][TOP] >UniRef100_A1D706 Transcription initiation protein n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D706_NEOFI Length = 350 Score = 77.8 bits (190), Expect = 6e-13 Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 21/179 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402 A C++IACRQ PRT EI +V T+KEIGR + + K + + + G Sbjct: 170 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTAQNLERINAVVSSGGV 228 Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 D RFC+ L++ +Q + + RSP+SI AA Sbjct: 229 PDPNDTYTATTSTKPSDLCNRFCNLLDLPYQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 288 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105 IY+ + L K K+IS V++GTIR +YK LY ++I P W + D+KNL Sbjct: 289 CIYMASYLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDMKNL 347 [193][TOP] >UniRef100_A1CKG6 Transcription initiation protein n=1 Tax=Aspergillus clavatus RepID=A1CKG6_ASPCL Length = 350 Score = 77.8 bits (190), Expect = 6e-13 Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 21/179 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402 A C++IACRQ PRT EI +V T+KEIGR + + K + + + G Sbjct: 170 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTAQNLERINAVVSSGGV 228 Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 D RFC+ L++ +Q + + RSP+SI AA Sbjct: 229 PDPNDTYTATTSTKPSDLCNRFCNLLDLPYQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 288 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105 IY+ + L K K+IS V++GTIR +YK LY ++I P W + D+KNL Sbjct: 289 CIYMASYLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDMKNL 347 [194][TOP] >UniRef100_C5A415 Transcription initiation factor TFIIB (Tfb) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A415_THEGJ Length = 303 Score = 77.8 bits (190), Expect = 6e-13 Identities = 48/148 (32%), Positives = 83/148 (56%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +A LY ACR E PRT+ EI V+ TKKEIGR+ ++ + LGL + + D Sbjct: 162 SAALYAACRMEGIPRTLDEIARVSK-VTKKEIGRSYRFMARGLGLNLRPTSPI------D 214 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF L ++ + + A+E +++A + I + P +AAA +Y+ + L +KK ++ Sbjct: 215 YVDRFGDALGVSSKTKQRAKEILQEAIKRGITSGKGPTGLAAAALYVASLLEGEKKTQRE 274 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 ++ V E T+RN YK+L ++ +P Sbjct: 275 VAEVAHVTEVTVRNRYKELVEKLNIKVP 302 [195][TOP] >UniRef100_Q3SBA6 Archaeal transcriptional initiation factor TFB n=1 Tax=uncultured euryarchaeote Alv-FOS5 RepID=Q3SBA6_9EURY Length = 474 Score = 77.8 bits (190), Expect = 6e-13 Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y+ CRQ PRT+ EI V+ G TKKEIGR ++ K+L V++ + Sbjct: 332 AAVIYMICRQYGIPRTLDEISEVS-GITKKEIGRTYRFLKKEL------YVDVPLTNPIY 384 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L ++ + + A+E + +A E + R P +AAA +YI + + +++ K+ Sbjct: 385 YVPRFASALGLSGKVQEKAKEILNEAVEKGLISGRGPTGVAAAAVYIASVMMGERRTQKE 444 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN Y++L Sbjct: 445 VAEVAGVTEVTIRNRYREL 463 [196][TOP] >UniRef100_B7R0Z5 Transcription initiation factor iib (Tfiib) n=1 Tax=Thermococcus sp. AM4 RepID=B7R0Z5_9EURY Length = 303 Score = 77.8 bits (190), Expect = 6e-13 Identities = 48/148 (32%), Positives = 83/148 (56%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +A LY ACR E PRT+ EI V+ TKKEIGR+ ++ + LGL + + D Sbjct: 162 SAALYAACRMEGIPRTLDEIARVSK-VTKKEIGRSYRFMARGLGLNLRPTSPI------D 214 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF L ++ + + A+E +++A + I + P +AAA +Y+ + L +KK ++ Sbjct: 215 YVDRFGDALGVSSKTKQRAKEILQEAIKRGITSGKGPTGLAAAALYVASLLEGEKKTQRE 274 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 ++ V E T+RN YK+L ++ +P Sbjct: 275 VAEVAHVTEVTVRNRYKELVEKLNIKVP 302 [197][TOP] >UniRef100_B8N1Q4 Transcription initiation protein n=2 Tax=Aspergillus RepID=B8N1Q4_ASPFN Length = 350 Score = 77.4 bits (189), Expect = 7e-13 Identities = 60/179 (33%), Positives = 83/179 (46%), Gaps = 21/179 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417 A C++IACRQ PRT EI +V ++KEIGR A E LE+ +V Sbjct: 170 AGCIFIACRQCKVPRTFTEIFAVTK-VSRKEIGRIYKALEKFFTAQNLERNNAVVSNGGV 228 Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 + D RFC+ L++ Q + + RSP+SI AA Sbjct: 229 PDPNDTYTATTSTKPSDLCNRFCNLLDLPFQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 288 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105 IY+ + L K K+IS V++GTIR +YK LY ++I P W + DLKNL Sbjct: 289 CIYMASYLMGHGKTAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDLKNL 347 [198][TOP] >UniRef100_A2QD90 Complex: TFIIB binds directly to TBP n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2QD90_ASPNC Length = 351 Score = 77.4 bits (189), Expect = 7e-13 Identities = 58/179 (32%), Positives = 82/179 (45%), Gaps = 21/179 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402 A C++IACRQ PRT EI +V T+KEIGR + + K + + + G Sbjct: 171 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTAQNLERINAVVSSGGV 229 Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 D RFC+ L++ Q + + RSP+SI AA Sbjct: 230 PDPNDTYTATTSTKPSDLCNRFCNLLDLPFQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 289 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105 IY+ + L K K+IS V++GTIR +YK LY ++I P W + DLKNL Sbjct: 290 CIYMASYLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDLKNL 348 [199][TOP] >UniRef100_Q5V5V1 Transcription initiation factor IIB n=1 Tax=Haloarcula marismortui RepID=Q5V5V1_HALMA Length = 319 Score = 77.4 bits (189), Expect = 7e-13 Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 2/137 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 ACLY ACRQE PR+++E+ V+ +KEIGR Y+ ++L L+ M + + Sbjct: 182 ACLYAACRQEGIPRSLEEVSDVSR-VEQKEIGRTYRYVAQELELK------MEPVDPKQY 234 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RF S L ++ + A E + E + +SP AAA IY + L ++KK +++ Sbjct: 235 VPRFASELELSEEVQSKANEIIDTTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 294 Query: 221 SIATGVAEGTIRNSYKD 171 + V E TIRN Y++ Sbjct: 295 ADVAQVTEVTIRNRYQE 311 [200][TOP] >UniRef100_B9LS68 Transcription factor TFIIB cyclin-related n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LS68_HALLT Length = 333 Score = 77.4 bits (189), Expect = 7e-13 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A LY ACR+E PR+++EI V+ +KEIGR YI ++LGLE M + + Sbjct: 195 AALYAACRKEGIPRSLEEISDVSR-VERKEIGRTYRYISQELGLE------MRPVDPKKY 247 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RF S L ++ + A E ++ E + +SP AAA IY + L ++KK +++ Sbjct: 248 VPRFSSELELSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 307 Query: 221 SIATGVAEGTIRNSYKD 171 + V E TIRN Y++ Sbjct: 308 ADVAQVTEVTIRNRYQE 324 [201][TOP] >UniRef100_B9HEV3 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9HEV3_POPTR Length = 278 Score = 77.0 bits (188), Expect = 1e-12 Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 6/154 (3%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A L A R+ +PRT++EI S+A +KEIG+ + + + L L + + ++H Sbjct: 110 AALVQAIREAQEPRTLQEI-SIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH---- 164 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234 M RFC+ L +N K+AQE E F RR+PISI+AA IY+ QL D +K Sbjct: 165 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 220 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132 +I TG+ E T+R YK+L + ++P Y Sbjct: 221 QAEICKVTGLTEVTLRKVYKELLENWGDLLPKNY 254 [202][TOP] >UniRef100_B6AAS1 Transcription initiation factor IIB, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AAS1_9CRYT Length = 431 Score = 77.0 bits (188), Expect = 1e-12 Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 2/147 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A +YIACR+E RTVKE+ + +++E RA + K L KG ++ A + Sbjct: 268 AIVYIACREEGVSRTVKELLTYDRSVSEREFVRAINKLKKDLP-RKGPTLSSS---AAEL 323 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRS--PISIAAAIIYIITQLSDDKKPLKDI 222 M RFC L ++H+ V A+ + AE++ I +S P S+AA IY ++ L + + +K + Sbjct: 324 MPRFCHYLQLSHEIVGVAEYVCRTAEQY-INKSHRPNSLAAGAIYFVSNLCNIQIDMKSV 382 Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIP 141 ++A E T+R Y++L +K++P Sbjct: 383 AVAAKSGETTVRGVYRELLLIGNKLLP 409 [203][TOP] >UniRef100_C7YH08 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YH08_NECH7 Length = 347 Score = 77.0 bits (188), Expect = 1e-12 Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 15/160 (9%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ----------- 432 A C++IACRQ + PRT +EI ++ + +KKE+GR + + L +GQ Sbjct: 170 AGCIFIACRQNNVPRTFREIFNLTS-VSKKEVGRVFKQLQSFLQKLQGQDGEATGLNAVT 228 Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAV--KAAQEAVKKAEEFDIR--RSPISIAAAIIYI 264 + E ++ A D R+ S L +Q K +++ ++A E RSP+S+AAA IY+ Sbjct: 229 NYENTSVGAEDLCGRYVSQLGFKNQQKISKISRDLAEQANEISALAGRSPLSVAAACIYM 288 Query: 263 ITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144 L + +P I+ GV++GT++ +YK L+ ++I Sbjct: 289 ACHLVGEPRPSLPIAKQAGVSDGTVKTAYKHLFAAREQLI 328 [204][TOP] >UniRef100_B6HCF2 Pc18g01520 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HCF2_PENCW Length = 350 Score = 77.0 bits (188), Expect = 1e-12 Identities = 56/168 (33%), Positives = 82/168 (48%), Gaps = 20/168 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSVEMGTI 411 A C++IACRQ PRT EI +V T+KEIGR +++ Q ++E G Sbjct: 170 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTTQNVERHNAALENGET 228 Query: 410 H--AGDF-----------MRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 H AGD+ RFC+ L++ +Q + + RSP+SI AA Sbjct: 229 HDFAGDYNATTSTKPSDLCNRFCNLLDLPYQVTSVSVSLSDRVTAMGDLAGRSPLSIVAA 288 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135 IY+ + L K K+IS V++GTIR +YK LY +++ P W Sbjct: 289 CIYMASFLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLVDPEW 336 [205][TOP] >UniRef100_Q18J17 Transcription initiation factor TFB n=1 Tax=Haloquadratum walsbyi DSM 16790 RepID=Q18J17_HALWD Length = 317 Score = 77.0 bits (188), Expect = 1e-12 Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 2/137 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 + LY ACRQE PR++ E+ V+ +KEIGR YI ++LGLE + + F Sbjct: 180 SALYAACRQEGIPRSLDEVAEVSR-VPQKEIGRTYRYISQELGLE------LRPVDPKQF 232 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RF S+L+++ + A E + + E + +SP AAA IY + L ++KK +++ Sbjct: 233 VPRFSSSLHLSEEVQSKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREV 292 Query: 221 SIATGVAEGTIRNSYKD 171 + V E TIRN Y++ Sbjct: 293 ADVAQVTEVTIRNRYQE 309 [206][TOP] >UniRef100_B9LNZ5 Transcription factor TFIIB cyclin-related n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LNZ5_HALLT Length = 317 Score = 77.0 bits (188), Expect = 1e-12 Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 2/137 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A LY ACRQE PR++ E+ V+ +KEIGR YI ++LGLE + + F Sbjct: 180 AALYAACRQEGIPRSLDEVADVSR-VPQKEIGRTYRYISQELGLE------LKPVDPKQF 232 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RF S L ++ + A E + + E + +SP AAA IY + L ++KK +++ Sbjct: 233 VPRFASALQLSEEVQSKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREV 292 Query: 221 SIATGVAEGTIRNSYKD 171 + V E TIRN Y++ Sbjct: 293 ADVAQVTEVTIRNRYQE 309 [207][TOP] >UniRef100_Q9HJM2 Transcription initiation factor IIB 2 n=1 Tax=Thermoplasma acidophilum RepID=TF2B2_THEAC Length = 307 Score = 77.0 bits (188), Expect = 1e-12 Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 2/138 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A +Y ACR+ + PRT+ EI S A+ KK+IG+A ++ K+L L + + Sbjct: 167 ASIYAACRKVNIPRTLDEI-SKASEVNKKKIGKAYRHLAKELDLNLKPTTPFS------Y 219 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + +FC+ L+++ QA+ +++ V++A I + P IAAA IYI + + K+I Sbjct: 220 ISQFCNKLDLDKQAIVISEDIVRQAMSMGISSGKGPTGIAAAAIYIASVKVGKPRTQKEI 279 Query: 221 SIATGVAEGTIRNSYKDL 168 + +GV E TIRN YK++ Sbjct: 280 ARISGVTEVTIRNRYKEI 297 [208][TOP] >UniRef100_P58109 Transcription initiation factor IIB 2 n=1 Tax=Thermococcus kodakarensis RepID=TF2B2_PYRKO Length = 306 Score = 77.0 bits (188), Expect = 1e-12 Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 +A LY ACR E PRT+ EI SV+ +KKEIGR+ ++ + LGL + + + Sbjct: 165 SAALYAACRMEGIPRTLDEIASVSK-VSKKEIGRSYRFMARGLGLNLRPTSPI------E 217 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF L ++ + K A+E + +A + I + P +AAA +YI L +KK ++ Sbjct: 218 YVDRFGDALGVSARTKKRAKEILNEAIKRGITSGKGPTGLAAAALYIAALLEGEKKTQRE 277 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 ++ V E T+RN YK+L + +P Sbjct: 278 VAEVAHVTEVTVRNRYKELVEKLGINVP 305 [209][TOP] >UniRef100_Q979Q3 Transcription initiation factor IIB 1 n=1 Tax=Thermoplasma volcanium RepID=TF2B1_THEVO Length = 312 Score = 77.0 bits (188), Expect = 1e-12 Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 A LY ACR + PRT+ EI SV KKEIGR + + L L S A D Sbjct: 171 AGALYAACRITNVPRTLGEIASVTR-VKKKEIGRTYRIMSRYLKLNIMPS------KAED 223 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS L ++ A E ++ AE + + P +AAA IYI + ++ +++ + Sbjct: 224 YISRFCSKLKLSMDTRNKALEILRDAENVGLTSGKGPTGVAAAAIYIASLITGERRTQRA 283 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 284 VAEVAGVTEVTIRNRYKEL 302 [210][TOP] >UniRef100_Q9HJM7 Transcription initiation factor IIB 1 n=1 Tax=Thermoplasma acidophilum RepID=TF2B1_THEAC Length = 312 Score = 77.0 bits (188), Expect = 1e-12 Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 A LY ACR + PRT+ EI SV KKEIGR + + L L S A D Sbjct: 171 AGALYAACRITNVPRTLGEIASVTR-VKKKEIGRTYRIMSRYLKLNIMPS------KAED 223 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RFCS L ++ A E ++ AE + + P +AAA IYI + ++ +++ + Sbjct: 224 YISRFCSKLKLSMDTRNKALEILRSAENAGLTSGKGPTGVAAAAIYIASLMTGERRTQRA 283 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ GV E TIRN YK+L Sbjct: 284 VAEVAGVTEVTIRNRYKEL 302 [211][TOP] >UniRef100_Q59M46 Likely transcription factor TFIIB n=1 Tax=Candida albicans RepID=Q59M46_CANAL Length = 176 Score = 76.6 bits (187), Expect = 1e-12 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 13/166 (7%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATK---KEIGRAKEYIVKQLGLEKG------QSV 426 AA + + CR+ D RT++EI ++ N ATK K G K+ I L + ++ Sbjct: 2 AATILLGCRRADVGRTLEEIRALTNVATKQIAKVTGLIKKIIRSHLNNDDASTSIVDETS 61 Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ- 255 + T A D +RRFCS+L ++ A++ +K + + RSP +IAA I++ + Sbjct: 62 SLTTHSAEDLIRRFCSHLGLSLAITSASEYVARKCHDLGVLAGRSPTTIAATSIFLAAKS 121 Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEE 120 L D K + I TGV+ GTI+NSYK L + +I P W A + Sbjct: 122 LGDTKLTQQQIRDKTGVSIGTIKNSYKILQENAKDLIDPAWEANSK 167 [212][TOP] >UniRef100_C4JYZ7 Transcription initiation factor IIB n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JYZ7_UNCRE Length = 353 Score = 76.6 bits (187), Expect = 1e-12 Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 21/179 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402 A C++IACRQ PRT EI ++ +KKEIGR + + K + + + G Sbjct: 173 AGCIFIACRQCKVPRTFTEIFALTR-VSKKEIGRIYKTLEKFFTAQNMERINSVVSSGGV 231 Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 D RFC+ L++ Q + + RSP+SI AA Sbjct: 232 PDPNETYTATTSTKPSDLCSRFCNLLDLPFQVTTVSSALADRVTSMGDLAGRSPLSIVAA 291 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105 IY+ + L K K+IS V++GTIR +YK LY ++I P+W + D+KNL Sbjct: 292 SIYMASFLMGQGKSAKEISAVAHVSDGTIRGAYKQLYAERERLIHPSWIKDGKGDMKNL 350 [213][TOP] >UniRef100_Q3ISF4 Transcription initiation factor TFB 1 n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3ISF4_NATPD Length = 322 Score = 76.6 bits (187), Expect = 1e-12 Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 4/139 (2%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL--GLEKGQSVEMGTIHAG 402 A LY ACRQE PR++ E+ VA +KEIGR YI ++L GLE V+ Sbjct: 185 AALYAACRQEGIPRSLDEVADVAR-VEQKEIGRTYRYIAQELSLGLEPVDPVQ------- 236 Query: 401 DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLK 228 ++ RFCS L ++ + + +E ++ E + +SP AAA IY + L ++KK + Sbjct: 237 -YVPRFCSELGLSEEVEQKTREIIEVTAEKGMLSGKSPTGYAAAAIYAASLLCNEKKTQR 295 Query: 227 DISIATGVAEGTIRNSYKD 171 +++ V E TIRN Y++ Sbjct: 296 EVAEVAQVTEVTIRNRYQE 314 [214][TOP] >UniRef100_B6YWX5 Transcription initiation factor IIB n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YWX5_THEON Length = 299 Score = 76.6 bits (187), Expect = 1e-12 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AAC+Y ACR PRT+ EI ++ KKEIGR+ +I + L L + T D Sbjct: 156 AACVYAACRLLKVPRTLDEIADISR-VDKKEIGRSFRFIARNLNLTPKKLFVKPT----D 210 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ +F L ++ + + A +++A E + +SP + AA +YI L D+K+ ++ Sbjct: 211 YVNKFADELGLSEKVRRRAIAILEEAYEKGLTSGKSPAGLVAAALYIAGLLEDEKRTQRE 270 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 ++ V E T+RN YK+L ++ IP Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLNLKIP 298 [215][TOP] >UniRef100_C7NY62 Transcription factor TFIIB cyclin-related n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7NY62_HALMD Length = 324 Score = 76.6 bits (187), Expect = 1e-12 Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 2/138 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 + LY A RQ + PR++ E+ V+ + E+ R YI+++LGLE + + Sbjct: 186 SALYAAARQANNPRSLDEMTHVSR-VERMELTRTYRYIIRELGLE------VAPAKPESY 238 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RFCS L+++ + + A+E ++ A + I +SP+ IAAA +Y L+++K ++ Sbjct: 239 VPRFCSELSLSDETERRARELIEAARDGGILSGKSPVGIAAAAVYAAALLTNEKVTQSEV 298 Query: 221 SIATGVAEGTIRNSYKDL 168 S ++E TIRN YK+L Sbjct: 299 SGVADISEVTIRNRYKEL 316 [216][TOP] >UniRef100_A8TD60 Transcription factor TFIIB cyclin-related n=1 Tax=Methanococcus voltae A3 RepID=A8TD60_METVO Length = 337 Score = 76.6 bits (187), Expect = 1e-12 Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 2/143 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACR+ PRT+ EI V+ +KEIGR +I ++L ++ + + D Sbjct: 196 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 248 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L + + A +K A + + R P +AAA IYI + L ++ ++ Sbjct: 249 YVPRFASELKLPGEVESKAISILKDAGKKGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 308 Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156 ++ GV E TIRN YK+L H+ Sbjct: 309 VADVAGVTEVTIRNRYKELTEHL 331 [217][TOP] >UniRef100_Q9HSB3 Transcription initiation factor IIB 6 n=2 Tax=Halobacterium salinarum RepID=TF2B6_HALSA Length = 319 Score = 76.6 bits (187), Expect = 1e-12 Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 2/138 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 +C+Y A RQ PR++ EI V+ K EI R Y+V++LGLE + + Sbjct: 180 SCVYAAARQAGVPRSLDEIADVSR-VEKAEIARTYRYVVRELGLE------VAPADPESY 232 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RF S+L ++ +A A+E +K A++ + +SP+ +AAA +Y L+++K + Sbjct: 233 VPRFASDLGLSDEASHRARELLKTAKDKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAKV 292 Query: 221 SIATGVAEGTIRNSYKDL 168 S ++E TIRN Y +L Sbjct: 293 SEVADISEVTIRNRYHEL 310 [218][TOP] >UniRef100_C7P8F9 Transcription factor TFIIB cyclin-related n=1 Tax=Methanocaldococcus fervens AG86 RepID=C7P8F9_METFA Length = 331 Score = 76.3 bits (186), Expect = 2e-12 Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 2/143 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y ACR+ PRT+ EI A+ +KEIGR ++ ++LG +++ + D Sbjct: 190 AAAIYAACRRCRVPRTLDEIAE-ASRVDRKEIGRTYRFLARELG------IKLTPTNPID 242 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L + + A + +++A E + R P +AAA IYI + L ++ ++ Sbjct: 243 YVPRFASELGLPGEVESKAIQILQQAAEKGLTSGRGPTGVAAAAIYIASVLLGCRRTQRE 302 Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156 ++ GV E TIRN YK+L H+ Sbjct: 303 VAEVAGVTEVTIRNRYKELTEHL 325 [219][TOP] >UniRef100_C1V5C9 Transcription initiation factor IIB (TFIIB) n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V5C9_9EURY Length = 327 Score = 76.3 bits (186), Expect = 2e-12 Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 2/137 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 + LY ACR+E PR+++EI V+ +KEIGR YI ++LGLE M + + Sbjct: 189 SALYAACRKEGIPRSLEEISDVSR-VERKEIGRTYRYISQELGLE------MKPVDPKKY 241 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RF S L+++ + A E ++ E + +SP AAA IY + L ++KK +++ Sbjct: 242 VPRFSSELDLSKEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 301 Query: 221 SIATGVAEGTIRNSYKD 171 + V E TIRN Y++ Sbjct: 302 ADVAQVTEVTIRNRYQE 318 [220][TOP] >UniRef100_Q979P7 Transcription initiation factor IIB 2 n=1 Tax=Thermoplasma volcanium RepID=TF2B2_THEVO Length = 313 Score = 76.3 bits (186), Expect = 2e-12 Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 2/138 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A +Y ACR+ + PRT+ EI A+ KK+IG+A ++ K+L L + + Sbjct: 173 ASIYAACRKVNIPRTLDEIAK-ASEVNKKKIGKAYRHLAKELDLNLRPTTPFS------Y 225 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + +FC+ L+++ QA+ +++ V++A I + P IAAA IYI + + K+I Sbjct: 226 IAQFCNKLDLDKQAIVISEDIVRQAMSMGISSGKGPTGIAAAAIYIASVKVGKPRTQKEI 285 Query: 221 SIATGVAEGTIRNSYKDL 168 + +GV E TIRN YK++ Sbjct: 286 ARISGVTEVTIRNRYKEI 303 [221][TOP] >UniRef100_Q3IN04 Transcription initiation factor TFB 6 n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IN04_NATPD Length = 329 Score = 75.9 bits (185), Expect = 2e-12 Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 2/137 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A LY ACRQE PR++ E+ VA +KEIGR Y+ ++LGLE + ++ Sbjct: 192 ATLYAACRQESIPRSLDEVAEVAR-VEQKEIGRTYRYLSQELGLE------IKPADPKEY 244 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RFCS L ++ + +E + E + +SP AAA IY + L ++KK +++ Sbjct: 245 VPRFCSELALSEAVEQKTREIIDVTAEEGMLSGKSPTGYAAAAIYAASLLCNEKKTQREV 304 Query: 221 SIATGVAEGTIRNSYKD 171 + V E TIRN Y++ Sbjct: 305 AEVAQVTEVTIRNRYQE 321 [222][TOP] >UniRef100_C7NZL7 Transcription factor TFIIB cyclin-related n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7NZL7_HALMD Length = 317 Score = 75.9 bits (185), Expect = 2e-12 Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 2/137 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 +CLY ACRQE PR+++E+ V+ +KEIGR Y+ ++L L+ M + + Sbjct: 180 SCLYAACRQEGIPRSLEEVSDVSR-VEQKEIGRTYRYVAQELKLK------MEPVDPKQY 232 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RF S L ++ + A E + E + +SP AAA IY + L ++KK +++ Sbjct: 233 VPRFASELELSEEVQSKANEIIDVTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 292 Query: 221 SIATGVAEGTIRNSYKD 171 + V E TIRN Y++ Sbjct: 293 ADVAQVTEVTIRNRYQE 309 [223][TOP] >UniRef100_P50387 Transcription initiation factor IIB n=1 Tax=Sulfolobus shibatae RepID=TF2B_SULSH Length = 309 Score = 75.9 bits (185), Expect = 2e-12 Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 2/149 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y ACR+ RT+ EI A +KE+ R ++++L V + D Sbjct: 167 AAAIYAACRRMKLARTLDEIAQYTK-ANRKEVARCYRLLLREL------DVSVPVSDPKD 219 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ R + L ++ + +K A E + KA+ + + P +AAA IYI + L D+++ K+ Sbjct: 220 YVTRIANLLGLSGRVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKE 279 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 I+ GV E T+RN YK+L + IPT Sbjct: 280 IAQVAGVTEVTVRNRYKELTQELKISIPT 308 [224][TOP] >UniRef100_Q9V0V5 Transcription initiation factor IIB n=1 Tax=Pyrococcus abyssi RepID=TF2B_PYRAB Length = 300 Score = 75.9 bits (185), Expect = 2e-12 Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AAC+Y ACR PRT+ EI +A KKEIGR+ +I + L L + T D Sbjct: 156 AACVYAACRLLKVPRTLDEISDIAR-VEKKEIGRSYRFIARNLNLTPKKLFVKPT----D 210 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ +F L ++ + + A E +++A + + +SP + AA +YI + L +K+ ++ Sbjct: 211 YVNKFADELGLSEKVRRRAIEILEEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQRE 270 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 ++ V E T+RN YK+L + +P Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLGIKVP 298 [225][TOP] >UniRef100_Q9P9I7 Transcription initiation factor IIB n=1 Tax=Methanothermococcus thermolithotrophicus RepID=TF2B_METTL Length = 339 Score = 75.9 bits (185), Expect = 2e-12 Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 2/143 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACR+ PRT+ EI + +KEIGR +I ++L ++ + + D Sbjct: 198 AAALYAACRRCKVPRTLDEIAE-GSRVDRKEIGRTYRFISREL------NIRLTPTNPID 250 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L + + A ++KA E + R P +AAA IYI + L ++ ++ Sbjct: 251 YVPRFASELKLPGEVESKAISILQKANEKGLTSGRGPTGVAAAAIYIASVLHGTRRTQRE 310 Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156 ++ GV E TIRN YK+L H+ Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333 [226][TOP] >UniRef100_A6UW60 Transcription initiation factor IIB n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=TF2B_META3 Length = 334 Score = 75.9 bits (185), Expect = 2e-12 Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 2/143 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY ACR+ PRT+ EI ++ +KEIGR +I ++L + + D Sbjct: 193 AAALYAACRRCKVPRTLDEIAEMSR-VDRKEIGRTYRFISREL------KIRLAPTSPID 245 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L + + A ++KA + + R P +AAA IYI + L +K ++ Sbjct: 246 YVPRFASELKLPGEVESKAISILQKAGDKGLTSGRGPTGVAAAAIYIASVLHGTRKTQRE 305 Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156 ++ GV E TIRN YK+L H+ Sbjct: 306 VADVAGVTEVTIRNRYKELTEHL 328 [227][TOP] >UniRef100_C1V8T9 Transcription initiation factor IIB (TFIIB) n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V8T9_9EURY Length = 317 Score = 75.5 bits (184), Expect = 3e-12 Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 2/137 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 + LY ACRQE PR++ E+ V+ +KEIGR YI ++LGLE + + F Sbjct: 180 SALYAACRQEGIPRSLDEVAEVSR-VPQKEIGRTYRYISQELGLE------LKPVDPKQF 232 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RF S L ++ + A E + + E + +SP AAA IY + L ++KK +++ Sbjct: 233 VPRFASALGLSEEVQAKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREV 292 Query: 221 SIATGVAEGTIRNSYKD 171 + V E TIRN Y++ Sbjct: 293 ADVAQVTEVTIRNRYQE 309 [228][TOP] >UniRef100_O59151 Transcription initiation factor IIB n=1 Tax=Pyrococcus horikoshii RepID=TF2B_PYRHO Length = 300 Score = 75.5 bits (184), Expect = 3e-12 Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AAC+Y ACR PRT+ EI +A KKEIGR+ +I + L L + T D Sbjct: 156 AACVYAACRLLKVPRTLDEISDIAR-VEKKEIGRSYRFIARNLNLTPKKLFVKPT----D 210 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ +F L ++ + + A E +++A + +SP + AA +YI + L +K+ ++ Sbjct: 211 YVNKFADELGLSEKVRRRAIEILEEAYRRGLTSGKSPAGLVAAALYIASLLEGEKRTQRE 270 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 ++ V E T+RN YK+L + +P Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLGIKVP 298 [229][TOP] >UniRef100_P61998 Transcription initiation factor IIB n=2 Tax=Pyrococcus RepID=TF2B_PYRFU Length = 300 Score = 75.5 bits (184), Expect = 3e-12 Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AAC+Y ACR PRT+ EI +A KKEIGR+ +I + L L + T D Sbjct: 156 AACVYAACRLLKVPRTLDEIADIAR-VDKKEIGRSYRFIARNLNLTPKKLFVKPT----D 210 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ +F L ++ + + A E + +A + + +SP + AA +YI + L +K+ ++ Sbjct: 211 YVNKFADELGLSEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQRE 270 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 ++ V E T+RN YK+L + +P Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLKIKVP 298 [230][TOP] >UniRef100_Q5JGN1 Transcription initiation factor IIB 1 n=1 Tax=Thermococcus kodakarensis RepID=TF2B1_PYRKO Length = 300 Score = 75.5 bits (184), Expect = 3e-12 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AAC+Y ACR PRT+ EI V+ KKEIGR+ +I + L L + T D Sbjct: 156 AACVYAACRLLKVPRTLDEIADVSR-VDKKEIGRSFRFIARHLNLTPKKLFVKPT----D 210 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ +F L ++ + + A E +++A + + +SP + AA +YI + + +K+ ++ Sbjct: 211 YVNKFADELGLSEKVRRRAIEILEEAYQRGLTSGKSPAGLVAAALYIASLMEGEKRTQRE 270 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 ++ V E T+RN YK+L ++ +P Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLNLKVP 298 [231][TOP] >UniRef100_UPI00003C83D7 transcription initiation factor IIB n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI00003C83D7 Length = 305 Score = 75.1 bits (183), Expect = 4e-12 Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 2/138 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A +Y +CR + PRT+ EI V+ KK+IG+A ++ K+L L + + Sbjct: 165 ASIYASCRMINIPRTLDEISKVSE-VNKKKIGKAYRHLAKELALNLQPTTPYS------Y 217 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + +FC+ L+++ Q + ++ ++ A E + + P IAAA IYI + ++ KD+ Sbjct: 218 VSQFCNKLDLDKQVIMDSEHIIRLAGESGLSTGKGPTGIAAAAIYIAAMKNGKQRTQKDV 277 Query: 221 SIATGVAEGTIRNSYKDL 168 + +GV E TIRN YK++ Sbjct: 278 ARVSGVTEVTIRNRYKEI 295 [232][TOP] >UniRef100_Q98S45 Transcription initiation factor IIB n=1 Tax=Guillardia theta RepID=Q98S45_GUITH Length = 325 Score = 75.1 bits (183), Expect = 4e-12 Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 5/150 (3%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA ++I C+ E PR+ KEI + KK+IG + K L + +++ D Sbjct: 160 AASIFIICKNESIPRSFKEISELTK-VKKKDIGNRVRIMEKAL-----EGIKISKKRDSD 213 Query: 398 -FMRRFCSNLNMNHQAVKAAQEAVK--KAEEFDIRRSPISIAAAIIYIITQLSD--DKKP 234 F+ RFCS L ++ + K A++ K +E R+ IS+AAA IY+++Q+ + + Sbjct: 214 NFISRFCSKLGLSSTSSKIAEQIANFIKDKEGMYGRNYISVAAASIYVVSQIPNLSNNCN 273 Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKII 144 LK I ATGV+E T+R++YK +YP+ +I+ Sbjct: 274 LKKIIEATGVSEITLRSAYKAMYPYRKEIL 303 [233][TOP] >UniRef100_C3MQW9 Transcription factor TFIIB cyclin-related n=5 Tax=Sulfolobus islandicus RepID=C3MQW9_SULIL Length = 309 Score = 75.1 bits (183), Expect = 4e-12 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 2/149 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y ACR+ RT+ EI A +KE+ R ++++L V + D Sbjct: 167 AAAIYAACRRMKLARTLDEIAQYTK-ANRKEVARCYRLLLREL------DVSVPVSDPKD 219 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ R + L ++ +K A E + KA+ + + P +AAA IYI + L D+++ K+ Sbjct: 220 YVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKE 279 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 I+ GV E T+RN YK+L + IPT Sbjct: 280 IAQVAGVTEVTVRNRYKELTQELKISIPT 308 [234][TOP] >UniRef100_B8D3B4 Transcription initiation factor IIB (TFIIB) n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3B4_DESK1 Length = 319 Score = 75.1 bits (183), Expect = 4e-12 Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y+ACR+ PR++ EI +KEI R ++++L +++ T D Sbjct: 179 AATIYLACREMKVPRSLDEITRHTR-VNRKEIARCYRLLLREL------HIKVTTTDPVD 231 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ R L + QAVK A E + KA+E + + P +AAA +YI + +K+ K+ Sbjct: 232 YVPRIVHGLGLPGQAVKIAIEIINKAKEQGVTGGKDPAGLAAAAVYIAAEQLGEKRTQKE 291 Query: 224 ISIATGVAEGTIRNSYKDL 168 I+ GV E T+RN YK+L Sbjct: 292 IAHVAGVTEVTVRNRYKEL 310 [235][TOP] >UniRef100_Q9UWN6 Transcription initiation factor IIB n=1 Tax=Sulfolobus acidocaldarius RepID=TF2B_SULAC Length = 307 Score = 75.1 bits (183), Expect = 4e-12 Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 2/149 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y ACR+ RT+ EI A +KE+ R I+++L +E+ D Sbjct: 165 AASIYAACRRMKMARTLDEIAQFTK-ANRKEVARCYRLILREL------DIEVPVSDPKD 217 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ R + L+++ +K A E ++KA+ + + P +AAA IYI L+D+++ K+ Sbjct: 218 YVTRIGTLLSLSGITMKHAAEIIEKAKNSGLTAGKDPAGLAAAAIYIAALLNDERRTQKE 277 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 I+ GV E T+RN YK+L + IP+ Sbjct: 278 IAQVAGVTEVTVRNRYKELTQELKIQIPS 306 [236][TOP] >UniRef100_P58111 Transcription initiation factor IIB 1 n=2 Tax=Sulfolobus solfataricus RepID=TF2B1_SULSO Length = 309 Score = 75.1 bits (183), Expect = 4e-12 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 2/149 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y ACR+ RT+ EI A +KE+ R ++++L V + D Sbjct: 167 AAAIYAACRRMKLARTLDEIAQYTK-ANRKEVARCYRLLLREL------DVSVPVSDPKD 219 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ R + L ++ +K A E + KA+ + + P +AAA IYI + L D+++ K+ Sbjct: 220 YVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKE 279 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 I+ GV E T+RN YK+L + IPT Sbjct: 280 IAQVAGVTEVTVRNRYKELTQELKISIPT 308 [237][TOP] >UniRef100_Q5CWC3 Transcription initiation factor TFIIB Sua7p; ZnR+2cyclins n=1 Tax=Cryptosporidium parvum Iowa II RepID=Q5CWC3_CRYPV Length = 456 Score = 74.7 bits (182), Expect = 5e-12 Identities = 47/148 (31%), Positives = 82/148 (55%), Gaps = 2/148 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A +Y+ACR+E RTVKE+ S +++E+ R+ + K L +G ++ A + Sbjct: 293 AIVYLACREEGVSRTVKELLSFDRTISERELVRSINKLKKDLP-RRGPTLSSS---AAEL 348 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRS--PISIAAAIIYIITQLSDDKKPLKDI 222 M RFC L ++H+ V A+ + AE++ I +S P S+AA IY + L + + +K + Sbjct: 349 MPRFCHYLQLSHEIVGIAEYVCRTAEQY-INKSHRPNSLAAGAIYFVCNLCNIQIEMKSV 407 Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIPT 138 ++A E T+R YK+L K++P+ Sbjct: 408 AVAAKSGETTVRGVYKELLLVGEKLLPS 435 [238][TOP] >UniRef100_B9ZB69 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZB69_NATMA Length = 326 Score = 74.7 bits (182), Expect = 5e-12 Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 2/138 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 AC+Y A RQ PR++ EI V+ K EI R Y+V++LGLE + + Sbjct: 186 ACVYAAARQAGVPRSLDEIADVSR-VEKNEIARTYRYVVRELGLE------VQPADPESY 238 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RF S L+++ +A A+ ++ A+E + +SP+ +AAA +Y L+++K + Sbjct: 239 VPRFASGLDLSDEAEHRARALLQNAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAV 298 Query: 221 SIATGVAEGTIRNSYKDL 168 S ++E TIRN Y +L Sbjct: 299 SDVADISEVTIRNRYHEL 316 [239][TOP] >UniRef100_Q975S1 Transcription initiation factor IIB n=1 Tax=Sulfolobus tokodaii RepID=TF2B_SULTO Length = 308 Score = 74.7 bits (182), Expect = 5e-12 Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y ACR+ RT+ EI A +KE+ R I+++L + + D Sbjct: 166 AASIYAACRRMKMARTLDEIAQFTK-ANRKEVARCYRLILREL------DINVPVSDPKD 218 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ R S L ++ +K A + ++KA+E + + P +AAA IYI L+D+++ K+ Sbjct: 219 YVTRIGSLLGLSGSTMKMAIDIIEKAKESGLTAGKDPAGLAAAAIYIAALLNDERRTQKE 278 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 I+ GV E T+RN YK+L + IP Sbjct: 279 IAQIAGVTEVTVRNRYKELTQELKIQIP 306 [240][TOP] >UniRef100_C5FDC5 Transcription initiation factor IIB n=1 Tax=Microsporum canis CBS 113480 RepID=C5FDC5_NANOT Length = 352 Score = 74.3 bits (181), Expect = 6e-12 Identities = 57/168 (33%), Positives = 77/168 (45%), Gaps = 20/168 (11%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417 A C++IACRQ PRT EI +V +KKEIGR A E LE+ SV Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VSKKEIGRIYKALEKFFTAQNLERINSVVSNGGV 230 Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276 + D RFC+ L++ Q + + RSP+SI AA Sbjct: 231 PDPNDAYTGTTSTKPSDLCNRFCNLLDLPFQVTNVSSMLADRVTSMGDLAGRSPLSIVAA 290 Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135 IY+ + L K K+IS V++GTIR +YK LY ++I P W Sbjct: 291 SIYMASFLMGHGKTAKEISGVAHVSDGTIRGAYKQLYAERERLIDPAW 338 [241][TOP] >UniRef100_A5DBP0 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii RepID=A5DBP0_PICGU Length = 339 Score = 74.3 bits (181), Expect = 6e-12 Identities = 50/160 (31%), Positives = 91/160 (56%), Gaps = 12/160 (7%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEM------- 420 AA + + CR+ + R+ EI ++ N KKE+GR + +++ L + + ++ Sbjct: 173 AASICLGCRKANVGRSFLEIAALTN-VPKKELGRVFKTMIQLLQEKHSNNPDVMHMTQQP 231 Query: 419 -GTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLS 249 + A D +RRFCS+L ++ Q AA+ ++ ++ I RSPI++AA +IY+ + + Sbjct: 232 VSSTSAEDLIRRFCSHLGLSTQISNAAEYIARRCKDEQILSGRSPITVAATVIYMASLIF 291 Query: 248 D-DKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135 + D P + I+ GV++GTI+ SYK L+ KI+ P+W Sbjct: 292 NVDVSPAR-IADKAGVSDGTIKTSYKVLFEEKDKILDPSW 330 [242][TOP] >UniRef100_Q3IRP2 Transcription initiation factor TFB 2 n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3IRP2_NATPD Length = 322 Score = 74.3 bits (181), Expect = 6e-12 Identities = 43/138 (31%), Positives = 77/138 (55%), Gaps = 2/138 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A LY A +Q PR++ E+ V+ K EI R Y+V++LGLE + + Sbjct: 182 ASLYAAAKQARTPRSLDEVAKVSR-VEKSEIARTYRYVVRELGLE------IQPADPKSY 234 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDI 222 + RF S++ ++ +A + A++ + A+E + +SP+ +AAA +Y + L ++K K++ Sbjct: 235 VPRFASDIELSDEAERRARQLLDNAQEAGVVSGKSPVGLAAAAVYAASLLCNEKVTQKEV 294 Query: 221 SIATGVAEGTIRNSYKDL 168 S ++E TIRN Y +L Sbjct: 295 SEVADISEVTIRNRYHEL 312 [243][TOP] >UniRef100_C9REA0 Transcription factor TFIIB cyclin-releated protein n=1 Tax=Methanocaldococcus vulcanius M7 RepID=C9REA0_9EURY Length = 666 Score = 74.3 bits (181), Expect = 6e-12 Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 2/143 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y ACR+ PRT+ EI A+ +KEIGR ++ ++L ++++ + D Sbjct: 525 AAAIYAACRRCRVPRTLDEIAE-ASRVDRKEIGRTYRFLAREL------NIKLTPTNPID 577 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L + + A + +++A E + R P +AAA IYI + L ++ ++ Sbjct: 578 YVPRFASELGLPGEVESKAIQILQQATEKGLTSGRGPTGVAAAAIYIASVLLGCRRTQRE 637 Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156 ++ GV E TIRN YK+L H+ Sbjct: 638 VAEVAGVTEVTIRNRYKELTEHL 660 [244][TOP] >UniRef100_B9ZI51 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZI51_NATMA Length = 321 Score = 74.3 bits (181), Expect = 6e-12 Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 2/135 (1%) Frame = -1 Query: 569 LYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMR 390 LY ACR E PR++ EI +V+ + EIGR YI K+LGLE M + ++ Sbjct: 185 LYAACRMEGIPRSLDEIAAVSR-VERMEIGRTYRYISKELGLE------MQPVDPKKYVP 237 Query: 389 RFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDISI 216 RFCS L + + A E + E + +SP AAA IY L + KK ++++ Sbjct: 238 RFCSELELPDEVQSKANEIIDTTAEKGMLSGKSPTGYAAAAIYAAALLCNKKKTQREVAD 297 Query: 215 ATGVAEGTIRNSYKD 171 V E TIRN Y++ Sbjct: 298 VAQVTEVTIRNRYQE 312 [245][TOP] >UniRef100_B9ZFI9 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZFI9_NATMA Length = 349 Score = 74.3 bits (181), Expect = 6e-12 Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 2/138 (1%) Frame = -1 Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396 A LY + RQ PR++ EI V+ K EI R Y++++LGLE + + + Sbjct: 210 ASLYASARQAGTPRSLDEIAGVSR-VEKDEIARTYRYVIRELGLEVQPADPVS------Y 262 Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222 + RF S+L+++ + + A++ ++ A+E I +SP+ +AAA +Y L+++K D+ Sbjct: 263 VPRFASDLDLSDETERRARQLLETAKESGIHSGKSPVGLAAAAVYAGALLTNEKVTQNDV 322 Query: 221 SIATGVAEGTIRNSYKDL 168 S ++E TIRN Y +L Sbjct: 323 SEVASISEVTIRNRYHEL 340 [246][TOP] >UniRef100_B5IT42 TFIIB zinc-binding family n=1 Tax=Thermococcus barophilus MP RepID=B5IT42_9EURY Length = 299 Score = 74.3 bits (181), Expect = 6e-12 Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 2/139 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AAC+Y ACR PRT+ EI +A KKEIGR+ +I + L L + T D Sbjct: 156 AACVYAACRLLKIPRTLDEIADIAR-VDKKEIGRSFRFIARNLNLTPKKLFVKPT----D 210 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ +F L ++ + + A E +++A + +SP + AA +YI + L +K+ ++ Sbjct: 211 YVNKFADELGLSEKVRRRAIELLEEAYNRGLTSGKSPAGLVAAALYIASLLEGEKRTQRE 270 Query: 224 ISIATGVAEGTIRNSYKDL 168 ++ V E T+RN YK+L Sbjct: 271 VAEVARVTEVTVRNRYKEL 289 [247][TOP] >UniRef100_Q58192 Endonuclease Mja Tfb n=1 Tax=Methanocaldococcus jannaschii RepID=TF2B_METJA Length = 673 Score = 74.3 bits (181), Expect = 6e-12 Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 2/143 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y ACR+ PRT+ EI A+ +KEIGR ++ ++L ++++ + D Sbjct: 532 AAAIYAACRRCRVPRTLDEIAE-ASRVDRKEIGRTYRFLAREL------NIKLTPTNPID 584 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ RF S L + + A + +++A E + R P +AAA IYI + L ++ ++ Sbjct: 585 YVPRFASELGLPGEVESKAIQILQQAAEKGLTSGRGPTGVAAAAIYIASVLLGCRRTQRE 644 Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156 ++ GV E TIRN YK+L H+ Sbjct: 645 VAEVAGVTEVTIRNRYKELTEHL 667 [248][TOP] >UniRef100_C3NGJ8 Transcription factor TFIIB cyclin-related n=1 Tax=Sulfolobus islandicus Y.N.15.51 RepID=C3NGJ8_SULIN Length = 309 Score = 73.9 bits (180), Expect = 8e-12 Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 2/149 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA +Y ACR+ RT+ EI A +KE+ R ++++L V + D Sbjct: 167 AAAIYAACRRMKLARTLDEIAQYTK-ANRKEVARCYRLLLREL------DVSVPVSDPKD 219 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ R + L ++ +K A E + KA+ + + P +AAA IYI + L D+++ K+ Sbjct: 220 YVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKE 279 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138 I+ GV E T+RN YK++ + IPT Sbjct: 280 IAQVAGVTEVTVRNRYKEVTQELKISIPT 308 [249][TOP] >UniRef100_A1RV37 Transcription initiation factor IIB n=1 Tax=Pyrobaculum islandicum DSM 4184 RepID=TF2B_PYRIL Length = 333 Score = 73.9 bits (180), Expect = 8e-12 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 2/148 (1%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399 AA LY+ACR PR + E+ A+++E+ R ++++L +V++ Sbjct: 191 AAALYMACRMMKMPRPLDELVRYTK-ASRREVARCYRLLLREL------NVKVPISDPVL 243 Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225 ++ R L ++ + VK A E ++KA++ I + P +AAA +YI + L D + KD Sbjct: 244 YISRIAEQLKLSGEVVKTAIEILQKAKKAGITAGKDPAGLAAAAVYIASLLHGDNRTQKD 303 Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141 ++A GV E T+RN YK+L ++ +P Sbjct: 304 FAVAAGVTEVTVRNRYKELAKTLNIKVP 331 [250][TOP] >UniRef100_UPI000151A977 hypothetical protein PGUG_00695 n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151A977 Length = 339 Score = 73.6 bits (179), Expect = 1e-11 Identities = 50/160 (31%), Positives = 90/160 (56%), Gaps = 12/160 (7%) Frame = -1 Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEM------- 420 AA + + CR+ + R+ EI ++ N KKE+GR + +++ L + + ++ Sbjct: 173 AASICLGCRKANVGRSFLEIAALTN-VPKKELGRVFKTMIQLLQEKHSNNPDVMHMTQQP 231 Query: 419 -GTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLS 249 + A D +RRFCS+L ++ Q AA+ ++ ++ I RSPI++AA +IY+ + + Sbjct: 232 VSSTSAEDLIRRFCSHLGLSTQISNAAEYIARRCKDEQILSGRSPITVAATVIYMASLIF 291 Query: 248 D-DKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135 + D P + I+ GV++GTI+ SYK L+ KI+ P W Sbjct: 292 NVDVSPAR-IADKAGVSDGTIKTSYKVLFEEKDKILDPLW 330