BB916450 ( RCE21868 )

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[1][TOP]
>UniRef100_P48513 Transcription initiation factor IIB n=1 Tax=Glycine max
           RepID=TF2B_SOYBN
          Length = 313

 Score =  302 bits (773), Expect = 1e-80
 Identities = 150/161 (93%), Positives = 156/161 (96%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE G +VEMGTIHAGD
Sbjct: 153 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLENGNAVEMGTIHAGD 212

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           FMRRFCSNL MN+QAVKAAQEAV+K+EEFDIRRSPISIAAA+IYIITQLSDDKKPLKDIS
Sbjct: 213 FMRRFCSNLCMNNQAVKAAQEAVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDIS 272

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           +ATGVAEGTIRNSYKDLYPHVSKIIP WYAKEEDLKNL SP
Sbjct: 273 LATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 313

[2][TOP]
>UniRef100_B9T8A1 Transcription initiation factor iib, putative n=1 Tax=Ricinus
           communis RepID=B9T8A1_RICCO
          Length = 312

 Score =  296 bits (759), Expect = 6e-79
 Identities = 148/161 (91%), Positives = 156/161 (96%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE GQSVEMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETGQSVEMGTIHAGD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           FMRRFCSNL MN+QA+KAAQEAV+K+EEFDIRRSPISIAAA+IYII+QLSDDKK L+DIS
Sbjct: 212 FMRRFCSNLGMNNQAMKAAQEAVQKSEEFDIRRSPISIAAAVIYIISQLSDDKKLLRDIS 271

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
            ATGVAEGTIRNSYKDLYPHVSKIIP+WYAKEEDLKNL SP
Sbjct: 272 HATGVAEGTIRNSYKDLYPHVSKIIPSWYAKEEDLKNLCSP 312

[3][TOP]
>UniRef100_Q9SS44 Transcription initiation factor IIB-2 n=2 Tax=Arabidopsis thaliana
           RepID=TF2B2_ARATH
          Length = 312

 Score =  295 bits (756), Expect = 1e-78
 Identities = 145/161 (90%), Positives = 154/161 (95%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE GQ VEMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETGQLVEMGTIHAGD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           FMRRFCSNL M +Q VKAAQE+V+K+EEFDIRRSPISIAAA+IYIITQLSD+KKPL+DIS
Sbjct: 212 FMRRFCSNLGMTNQTVKAAQESVQKSEEFDIRRSPISIAAAVIYIITQLSDEKKPLRDIS 271

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           +ATGVAEGTIRNSYKDLYPH+SKIIP WYAKEEDLKNL SP
Sbjct: 272 VATGVAEGTIRNSYKDLYPHLSKIIPAWYAKEEDLKNLQSP 312

[4][TOP]
>UniRef100_B9H9K1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H9K1_POPTR
          Length = 312

 Score =  295 bits (755), Expect = 2e-78
 Identities = 146/161 (90%), Positives = 153/161 (95%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE GQSVEMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEAGQSVEMGTIHAGD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           FMRRFCSNL M++  VKAA EAVK +E+FDIRRSPISIAAA+IYIITQLSDDKKPL+DIS
Sbjct: 212 FMRRFCSNLGMSNHTVKAATEAVKTSEQFDIRRSPISIAAAVIYIITQLSDDKKPLRDIS 271

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           +ATGVAEGTIRNSYKDLYPHVSKIIP WYA EEDLKNLSSP
Sbjct: 272 LATGVAEGTIRNSYKDLYPHVSKIIPAWYANEEDLKNLSSP 312

[5][TOP]
>UniRef100_B9II90 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9II90_POPTR
          Length = 312

 Score =  293 bits (751), Expect = 5e-78
 Identities = 145/161 (90%), Positives = 153/161 (95%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE GQSVEMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETGQSVEMGTIHAGD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           FMRRFCSNL M++  VKAA EAVK +E+FDIRRSPISIAAA+IYIITQLSDDKKPL+DIS
Sbjct: 212 FMRRFCSNLGMSNHTVKAATEAVKTSEQFDIRRSPISIAAAVIYIITQLSDDKKPLRDIS 271

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           +ATGVAEGTIRNSYKDLYPHVSKIIP+WYA EEDLKNL SP
Sbjct: 272 LATGVAEGTIRNSYKDLYPHVSKIIPSWYASEEDLKNLCSP 312

[6][TOP]
>UniRef100_A7PWI7 Chromosome chr8 scaffold_34, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7PWI7_VITVI
          Length = 312

 Score =  292 bits (747), Expect = 1e-77
 Identities = 144/161 (89%), Positives = 154/161 (95%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL  EKGQSVEMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEAEKGQSVEMGTIHAGD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           FMRRFCSNL M +Q VKAAQEAV+K+EEFDIRRSP+SIAAA+IYIITQLSD+KK L+DIS
Sbjct: 212 FMRRFCSNLGMTNQVVKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDIS 271

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           IATGVAEGTIRNSYKDLYPH+SKIIP+WYAKEEDL+NL SP
Sbjct: 272 IATGVAEGTIRNSYKDLYPHISKIIPSWYAKEEDLRNLCSP 312

[7][TOP]
>UniRef100_A7QJY1 Chromosome undetermined scaffold_109, whole genome shotgun sequence
           n=1 Tax=Vitis vinifera RepID=A7QJY1_VITVI
          Length = 312

 Score =  291 bits (744), Expect = 3e-77
 Identities = 143/161 (88%), Positives = 154/161 (95%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL  EKGQSVEMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEAEKGQSVEMGTIHAGD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           FMRRFCSNL M +Q VKAAQEAV+K+EEFDIRRSP+SIAAA+IYIITQLSD+KK L+DIS
Sbjct: 212 FMRRFCSNLGMTNQVVKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDIS 271

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           IATGVAEGTIRNSYKDLYPH+S+IIP+WYAKEEDL+NL SP
Sbjct: 272 IATGVAEGTIRNSYKDLYPHISRIIPSWYAKEEDLRNLCSP 312

[8][TOP]
>UniRef100_A5BBG2 Putative uncharacterized protein (Fragment) n=1 Tax=Vitis vinifera
           RepID=A5BBG2_VITVI
          Length = 312

 Score =  291 bits (744), Expect = 3e-77
 Identities = 143/161 (88%), Positives = 154/161 (95%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL  EKGQSVEMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEAEKGQSVEMGTIHAGD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           FMRRFCSNL M +Q VKAAQEAV+K+EEFDIRRSP+SIAAA+IYIITQLSD+KK L+DIS
Sbjct: 212 FMRRFCSNLGMTNQVVKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDIS 271

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           IATGVAEGTIRNSYKDLYPH+S+IIP+WYAKEEDL+NL SP
Sbjct: 272 IATGVAEGTIRNSYKDLYPHISRIIPSWYAKEEDLRNLCSP 312

[9][TOP]
>UniRef100_P48512 Transcription initiation factor IIB-1 n=2 Tax=Arabidopsis thaliana
           RepID=TF2B1_ARATH
          Length = 312

 Score =  285 bits (729), Expect = 2e-75
 Identities = 140/161 (86%), Positives = 152/161 (94%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQEDKPRT+KEIC +ANGATKKEIGRAK+YIVK LGLE GQSV++GTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTIKEICVIANGATKKEIGRAKDYIVKTLGLEPGQSVDLGTIHAGD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           FMRRFCSNL M++ AVKAAQEAV+K+EEFDIRRSPISIAA +IYIITQLSDDKK LKDIS
Sbjct: 212 FMRRFCSNLAMSNHAVKAAQEAVQKSEEFDIRRSPISIAAVVIYIITQLSDDKKTLKDIS 271

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
            ATGVAEGTIRNSYKDLYPH+SKI P+WYAKEEDLKNLSSP
Sbjct: 272 HATGVAEGTIRNSYKDLYPHLSKIAPSWYAKEEDLKNLSSP 312

[10][TOP]
>UniRef100_B9RIF2 Transcription initiation factor iib, putative n=1 Tax=Ricinus
           communis RepID=B9RIF2_RICCO
          Length = 312

 Score =  278 bits (711), Expect = 2e-73
 Identities = 138/161 (85%), Positives = 152/161 (94%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL +E GQS+EMGTIHAGD
Sbjct: 152 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEVELGQSMEMGTIHAGD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           F+RRFCS+L MN+QAVKAAQEAVKK+EE DIRRSPISIAAAIIY+ITQLS++KK LKDIS
Sbjct: 212 FLRRFCSHLGMNNQAVKAAQEAVKKSEELDIRRSPISIAAAIIYMITQLSEEKKLLKDIS 271

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
            +TGVAEGTIRNSYKDLYP+ S+I+P+WYAKEEDL NL SP
Sbjct: 272 TSTGVAEGTIRNSYKDLYPYASRIVPSWYAKEEDLINLCSP 312

[11][TOP]
>UniRef100_Q8W0W3 Transcription initiation factor IIB n=3 Tax=Oryza sativa
           RepID=TF2B_ORYSJ
          Length = 312

 Score =  278 bits (710), Expect = 3e-73
 Identities = 136/161 (84%), Positives = 152/161 (94%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAGD
Sbjct: 152 AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           F+RRFCS L MN+QAVKAAQEAV+++EE DIRRSPISIAAA+IY+ITQLSDDKKPLKDIS
Sbjct: 212 FLRRFCSTLGMNNQAVKAAQEAVQRSEELDIRRSPISIAAAVIYMITQLSDDKKPLKDIS 271

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           +ATGVAEGTIRNSYKDLYP+ S++IP  YAKEEDLKNL +P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312

[12][TOP]
>UniRef100_A7PQV4 Chromosome chr6 scaffold_25, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7PQV4_VITVI
          Length = 314

 Score =  275 bits (704), Expect = 1e-72
 Identities = 136/161 (84%), Positives = 152/161 (94%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AAC+YIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL +E GQS+EMGTIHAGD
Sbjct: 154 AACIYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           F+RRFCS+L M +QAVKAAQEAV+K+EE DIRRSPIS+AAA+IY+ITQLSDDKK LKDIS
Sbjct: 214 FLRRFCSHLGMTNQAVKAAQEAVQKSEELDIRRSPISVAAAVIYMITQLSDDKKLLKDIS 273

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           +ATGVAEGTIRNSYKDLYP+ S+IIP+ YAKEEDL+NL SP
Sbjct: 274 LATGVAEGTIRNSYKDLYPYASRIIPSSYAKEEDLRNLCSP 314

[13][TOP]
>UniRef100_C5X694 Putative uncharacterized protein Sb02g031020 n=1 Tax=Sorghum
           bicolor RepID=C5X694_SORBI
          Length = 312

 Score =  275 bits (703), Expect = 2e-72
 Identities = 134/161 (83%), Positives = 152/161 (94%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAGD
Sbjct: 152 AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           F+RRFCS L MN+QAVKAAQEAV+++EE DIRRSPISIAAA+IY+ITQLS+DKKPLKDIS
Sbjct: 212 FLRRFCSTLGMNNQAVKAAQEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDIS 271

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           +ATGVAEGTIRNSYKDLYP+ +++IP  YAKEEDLKNL +P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYAARLIPNTYAKEEDLKNLCTP 312

[14][TOP]
>UniRef100_B4FHS1 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=B4FHS1_MAIZE
          Length = 312

 Score =  272 bits (696), Expect = 1e-71
 Identities = 133/161 (82%), Positives = 151/161 (93%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAG+
Sbjct: 152 AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGN 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           F+RRFCS L MN+QAV+AAQ+AVK +EE DIRRSPISIAAA+IY+ITQLS+DKKPLKDIS
Sbjct: 212 FLRRFCSTLGMNNQAVRAAQDAVKHSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDIS 271

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           +ATGVAEGTIRNSYKDLYP+ S++IP  YAKEEDLKNL +P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312

[15][TOP]
>UniRef100_B6THD9 Transcription initiation factor IIB n=1 Tax=Zea mays
           RepID=B6THD9_MAIZE
          Length = 312

 Score =  270 bits (691), Expect = 5e-71
 Identities = 132/161 (81%), Positives = 150/161 (93%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAGD
Sbjct: 152 AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           F+RRFCS L M +QAV AA+EAV+++EE DIRRSPISIAAA+IY+ITQLS+DKKPLKDIS
Sbjct: 212 FLRRFCSTLGMTNQAVNAAKEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDIS 271

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           +ATGVAEGTIRNSYKDLYP+ S++IP  YAKEEDLKNL +P
Sbjct: 272 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 312

[16][TOP]
>UniRef100_B4FRH0 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=B4FRH0_MAIZE
          Length = 198

 Score =  270 bits (691), Expect = 5e-71
 Identities = 132/161 (81%), Positives = 150/161 (93%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQED+PRTVKEICSVANGATKKEIGRAKE+IVKQL +E GQS+EMGTIHAGD
Sbjct: 38  AACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGD 97

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           F+RRFCS L M +QAV AA+EAV+++EE DIRRSPISIAAA+IY+ITQLS+DKKPLKDIS
Sbjct: 98  FLRRFCSTLGMTNQAVNAAKEAVQRSEELDIRRSPISIAAAVIYMITQLSEDKKPLKDIS 157

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           +ATGVAEGTIRNSYKDLYP+ S++IP  YAKEEDLKNL +P
Sbjct: 158 LATGVAEGTIRNSYKDLYPYASRLIPNTYAKEEDLKNLCTP 198

[17][TOP]
>UniRef100_B8LMH3 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=B8LMH3_PICSI
          Length = 313

 Score =  266 bits (680), Expect = 9e-70
 Identities = 130/161 (80%), Positives = 148/161 (91%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQEDKPRTVKEICSVANGA+KKE+GRAKE+IVKQL  E G+S+EMGTIHAGD
Sbjct: 153 AACLYIACRQEDKPRTVKEICSVANGASKKEVGRAKEFIVKQLEEEMGKSMEMGTIHAGD 212

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           F+RRFCS+L M HQAVKAA EAVKK+EE DIRRSPISIAAA IY+I+QLS++KK L+DIS
Sbjct: 213 FLRRFCSHLGMGHQAVKAATEAVKKSEELDIRRSPISIAAAAIYMISQLSEEKKLLRDIS 272

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
            ATGVAEGTIRNSYKDLYPH +++IP W+AKEEDLKNL +P
Sbjct: 273 RATGVAEGTIRNSYKDLYPHAARLIPDWFAKEEDLKNLCAP 313

[18][TOP]
>UniRef100_B9IEI3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IEI3_POPTR
          Length = 311

 Score =  257 bits (657), Expect = 4e-67
 Identities = 126/160 (78%), Positives = 143/160 (89%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQE+K RTVKEICSV NG TKKEIGRAKE+IVK L +E G S+EMGTIHA D
Sbjct: 152 AACLYIACRQENKARTVKEICSVVNGTTKKEIGRAKEFIVKHLEVEMGHSMEMGTIHAAD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           ++RRFCSNL M +QAVKAA EAV+K+EE DIRRSPISIAAA+IYII QLSDDKKPLKDIS
Sbjct: 212 YLRRFCSNLGMTNQAVKAAHEAVQKSEELDIRRSPISIAAAVIYIIIQLSDDKKPLKDIS 271

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSS 99
           + T VAEGTI+NSYKDL PH+S+IIP+W+AKEED+KNL S
Sbjct: 272 VVTQVAEGTIKNSYKDLSPHLSQIIPSWFAKEEDIKNLHS 311

[19][TOP]
>UniRef100_A9T0Q7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9T0Q7_PHYPA
          Length = 312

 Score =  228 bits (582), Expect = 2e-58
 Identities = 116/163 (71%), Positives = 137/163 (84%), Gaps = 2/163 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVK-EICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG 402
           AACLYIACRQEDKPRT K EICSVANGA+KK+IGRA ++IVKQL  + G S+EMGTIHAG
Sbjct: 150 AACLYIACRQEDKPRTFKAEICSVANGASKKDIGRATKFIVKQLEEDMGISMEMGTIHAG 209

Query: 401 DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSD-DKKPLKD 225
           DF+RRFCS+LNM +  V+AA E VKK+E  DIR+SPIS+AAA IY+I+QL++ DKK LKD
Sbjct: 210 DFLRRFCSHLNMENNEVRAATETVKKSEMLDIRKSPISVAAAAIYMISQLNEKDKKALKD 269

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           IS   GVAE TIRNSYKDLYPH +K+IP W+ KE DLKNL +P
Sbjct: 270 ISRVAGVAEVTIRNSYKDLYPHAAKLIPDWFLKEVDLKNLPAP 312

[20][TOP]
>UniRef100_A9RXM3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RXM3_PHYPA
          Length = 312

 Score =  186 bits (472), Expect = 1e-45
 Identities = 96/160 (60%), Positives = 122/160 (76%), Gaps = 2/160 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKE-ICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG 402
           A+CLYIACRQEDKPRT KE ICSV+NGA+K + GR  + +VKQ+    G S+EMGTIHAG
Sbjct: 150 ASCLYIACRQEDKPRTFKEEICSVSNGASKTDTGRITKKLVKQIEKGMGISMEMGTIHAG 209

Query: 401 DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSD-DKKPLKD 225
           DF RRFCS+L+M    V+A  E VKK+E   I RSP+S+AAA I++I+QL++ DKK LKD
Sbjct: 210 DFSRRFCSHLDMEKNEVRAITETVKKSEMLVIGRSPLSVAAAAIFMISQLNEKDKKELKD 269

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNL 105
           IS   GV E +IR  Y++LYPH SK+IP W+ K+ DLK+L
Sbjct: 270 ISRVAGVNEESIRFMYRELYPHASKLIPEWFLKDVDLKHL 309

[21][TOP]
>UniRef100_B9IK69 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
           RepID=B9IK69_POPTR
          Length = 297

 Score =  181 bits (459), Expect = 4e-44
 Identities = 88/161 (54%), Positives = 120/161 (74%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACL+I+ R+   PRT+ EI SV  G TKKEI +A + I + + LE     +MGT++  +
Sbjct: 142 AACLFISSRENKLPRTLNEISSVVYGVTKKEINKAVQSIKRHVELE-----DMGTLNPSE 196

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
            +RRFCSNL M + AVKA  EAV+K ++ DIRR+P S+ AAIIY ITQLSD+KKPL+DIS
Sbjct: 197 LVRRFCSNLGMKNHAVKAVHEAVEKIQDVDIRRNPKSVLAAIIYTITQLSDEKKPLRDIS 256

Query: 218 IATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           +A  VAEGTI+ S+KD+ PHVS+++P WYA+EED++ +  P
Sbjct: 257 LAADVAEGTIKKSFKDISPHVSRLVPKWYAREEDIRRIRIP 297

[22][TOP]
>UniRef100_C5YUY2 Putative uncharacterized protein Sb09g027310 n=1 Tax=Sorghum
           bicolor RepID=C5YUY2_SORBI
          Length = 311

 Score =  148 bits (374), Expect = 3e-34
 Identities = 75/147 (51%), Positives = 103/147 (70%), Gaps = 3/147 (2%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSV--ANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHA 405
           AACLY+ACR E KPRT KE+ +V  A  + KKEIG+    I K LG E GQ +++G + A
Sbjct: 163 AACLYVACRNEGKPRTYKELATVTAAGASAKKEIGKMTTLIKKVLGEEAGQVMDIGVVRA 222

Query: 404 GDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPLK 228
            D+MRRFCS L M +Q ++AAQEA ++ E   D+RR+P SIAAAI Y++ Q +   K ++
Sbjct: 223 ADYMRRFCSRLGMGNQEMRAAQEAARRLENGLDVRRNPESIAAAISYMVVQRAGAGKTVR 282

Query: 227 DISIATGVAEGTIRNSYKDLYPHVSKI 147
           D+S+ATGVAE TI+ ++KDL PH   +
Sbjct: 283 DVSMATGVAEATIKEAHKDLTPHAEML 309

[23][TOP]
>UniRef100_Q5KQD1 Os05g0548200 protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q5KQD1_ORYSJ
          Length = 316

 Score =  143 bits (361), Expect = 8e-33
 Identities = 75/146 (51%), Positives = 104/146 (71%), Gaps = 4/146 (2%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVA--NGATKKEIGRAKEYIVKQLGLE-KGQSVEMGTIH 408
           AACL+IACR E  PRT KE+ SV     A KKEIGR    I K LG + +G+++++G + 
Sbjct: 166 AACLFIACRNEGMPRTYKELASVTAEGAAAKKEIGRLTTLIKKHLGDQGEGRAMDIGVVR 225

Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPL 231
           + D++RRFCS L + HQ V+AA +AV++ EE  D+RR+P SIAAAIIY++ Q +   K +
Sbjct: 226 STDYLRRFCSRLGLGHQDVRAAGDAVRRLEERLDVRRNPESIAAAIIYMVVQRAGGSKSV 285

Query: 230 KDISIATGVAEGTIRNSYKDLYPHVS 153
           +D+S ATGVAEGTI  ++K+L PH S
Sbjct: 286 RDVSTATGVAEGTITAAHKELAPHAS 311

[24][TOP]
>UniRef100_B9FLG0 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
           Group RepID=B9FLG0_ORYSJ
          Length = 287

 Score =  143 bits (361), Expect = 8e-33
 Identities = 75/146 (51%), Positives = 104/146 (71%), Gaps = 4/146 (2%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVA--NGATKKEIGRAKEYIVKQLGLE-KGQSVEMGTIH 408
           AACL+IACR E  PRT KE+ SV     A KKEIGR    I K LG + +G+++++G + 
Sbjct: 137 AACLFIACRNEGMPRTYKELASVTAEGAAAKKEIGRLTTLIKKHLGDQGEGRAMDIGVVR 196

Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPL 231
           + D++RRFCS L + HQ V+AA +AV++ EE  D+RR+P SIAAAIIY++ Q +   K +
Sbjct: 197 STDYLRRFCSRLGLGHQDVRAAGDAVRRLEERLDVRRNPESIAAAIIYMVVQRAGGSKSV 256

Query: 230 KDISIATGVAEGTIRNSYKDLYPHVS 153
           +D+S ATGVAEGTI  ++K+L PH S
Sbjct: 257 RDVSTATGVAEGTITAAHKELAPHAS 282

[25][TOP]
>UniRef100_A2Y747 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=A2Y747_ORYSI
          Length = 319

 Score =  143 bits (361), Expect = 8e-33
 Identities = 75/146 (51%), Positives = 104/146 (71%), Gaps = 4/146 (2%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVA--NGATKKEIGRAKEYIVKQLGLE-KGQSVEMGTIH 408
           AACL+IACR E  PRT KE+ SV     A KKEIGR    I K LG + +G+++++G + 
Sbjct: 169 AACLFIACRNEGMPRTYKELASVTAEGAAAKKEIGRLTTLIKKHLGDQGEGRAMDIGVVR 228

Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPL 231
           + D++RRFCS L + HQ V+AA +AV++ EE  D+RR+P SIAAAIIY++ Q +   K +
Sbjct: 229 STDYLRRFCSRLGLGHQDVRAAGDAVRRLEERLDVRRNPESIAAAIIYMVVQRAGGSKSV 288

Query: 230 KDISIATGVAEGTIRNSYKDLYPHVS 153
           +D+S ATGVAEGTI  ++K+L PH S
Sbjct: 289 RDVSTATGVAEGTITAAHKELAPHAS 314

[26][TOP]
>UniRef100_Q6S7A3 Mutant TFIIB3 (Fragment) n=1 Tax=Arabidopsis thaliana
           RepID=Q6S7A3_ARATH
          Length = 336

 Score =  139 bits (350), Expect = 2e-31
 Identities = 76/159 (47%), Positives = 105/159 (66%), Gaps = 4/159 (2%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ---SVEMGTIH 408
           AA +  ACR+    RT+KEI  VANG  KK+I   KE +V +  LE  Q   S     I+
Sbjct: 162 AASVSTACRELQLSRTLKEIAEVANGVDKKDI--RKESLVIKRVLESHQTSVSASQAIIN 219

Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSD-DKKPL 231
            GD +RRFCS L+++ + + A  EAV+KAE FDIRR+P S+ AAII++I+ +S  ++KP+
Sbjct: 220 TGDLVRRFCSKLDISQREIMAIPEAVEKAENFDIRRNPKSVLAAIIFMISHISQTNRKPI 279

Query: 230 KDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDL 114
           ++I I   V E TI+NS KD+YP+  KIIP WYA E D+
Sbjct: 280 REIGIVAEVVENTIKNSVKDMYPYALKIIPNWYACESDI 318

[27][TOP]
>UniRef100_Q9LIA6 Transcription initiation factor IIB (TFIIB)-like protein n=1
           Tax=Arabidopsis thaliana RepID=Q9LIA6_ARATH
          Length = 336

 Score =  137 bits (346), Expect = 5e-31
 Identities = 75/159 (47%), Positives = 105/159 (66%), Gaps = 4/159 (2%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ---SVEMGTIH 408
           AA +  ACR+    RT+KEI  VANG  KK+I   KE +V +  LE  Q   S     I+
Sbjct: 162 AASVSTACRELQLSRTLKEIAEVANGVDKKDI--RKESLVIKRVLESHQTSVSASQAIIN 219

Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSD-DKKPL 231
            G+ +RRFCS L+++ + + A  EAV+KAE FDIRR+P S+ AAII++I+ +S  ++KP+
Sbjct: 220 TGELVRRFCSKLDISQREIMAIPEAVEKAENFDIRRNPKSVLAAIIFMISHISQTNRKPI 279

Query: 230 KDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDL 114
           ++I I   V E TI+NS KD+YP+  KIIP WYA E D+
Sbjct: 280 REIGIVAEVVENTIKNSVKDMYPYALKIIPNWYACESDI 318

[28][TOP]
>UniRef100_Q9M2L0 Putative uncharacterized protein F28O9.220 n=1 Tax=Arabidopsis
           thaliana RepID=Q9M2L0_ARATH
          Length = 360

 Score =  137 bits (345), Expect = 6e-31
 Identities = 73/165 (44%), Positives = 107/165 (64%), Gaps = 4/165 (2%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AAC+YIACR  D  RT++EI   AN A+  +I     +I ++L + K   +   +I   +
Sbjct: 202 AACIYIACRDNDMTRTMREISRFANKASISDISETVGFIAEKLEINKNWYM---SIETAN 258

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI----RRSPISIAAAIIYIITQLSDDKKPL 231
           F++RFCS   ++ +AV+AA EA   AE +D     RR+P+S+AA I+Y+I +LS +K  L
Sbjct: 259 FIKRFCSIFRLDKEAVEAALEA---AESYDYMTNGRRAPVSVAAGIVYVIARLSYEKHLL 315

Query: 230 KDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           K +  ATGVAE TI+ +Y DLYP++  I+PTW+A   DLKNL +P
Sbjct: 316 KGLIEATGVAENTIKGTYGDLYPNLPTIVPTWFANANDLKNLGAP 360

[29][TOP]
>UniRef100_Q1PEE4 Transcription factor IIB family protein n=2 Tax=Arabidopsis
           thaliana RepID=Q1PEE4_ARATH
          Length = 362

 Score =  136 bits (343), Expect = 1e-30
 Identities = 73/167 (43%), Positives = 107/167 (64%), Gaps = 6/167 (3%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AAC+YIACR  D  RT++EI   AN A+  +I     +I ++L + K   +   +I   +
Sbjct: 202 AACIYIACRDNDMTRTMREISRFANKASISDISETVGFIAEKLEINKNWYM---SIETAN 258

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI------RRSPISIAAAIIYIITQLSDDKK 237
           F++RFCS   ++ +AV+AA EA   AE +D       RR+P+S+AA I+Y+I +LS +K 
Sbjct: 259 FIKRFCSIFRLDKEAVEAALEA---AESYDYMTNGCSRRAPVSVAAGIVYVIARLSYEKH 315

Query: 236 PLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
            LK +  ATGVAE TI+ +Y DLYP++  I+PTW+A   DLKNL +P
Sbjct: 316 LLKGLIEATGVAENTIKGTYGDLYPNLPTIVPTWFANANDLKNLGAP 362

[30][TOP]
>UniRef100_UPI00003C0936 PREDICTED: similar to Transcription initiation factor IIB (General
           transcription factor TFIIB) isoform 1 n=1 Tax=Apis
           mellifera RepID=UPI00003C0936
          Length = 315

 Score =  134 bits (337), Expect = 5e-30
 Identities = 75/148 (50%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLILKAL------ETSVDLITTGD 212

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL + +   +AA    +KA E DI   RSPIS+AAA IY+ +Q S+DK+  K+
Sbjct: 213 FMSRFCSNLGLPNMVQRAATHIARKAVEIDIVPGRSPISVAAAAIYMASQASEDKRSQKE 272

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SYK +YPH  K+ P
Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAGKLFP 300

[31][TOP]
>UniRef100_UPI000186D9D8 transcription initiation factor iib, putative n=1 Tax=Pediculus
           humanus corporis RepID=UPI000186D9D8
          Length = 313

 Score =  132 bits (332), Expect = 2e-29
 Identities = 75/148 (50%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +A LYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 158 SAALYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLILKAL------ETSVDLITTGD 210

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL + +   +AA    +KA E DI   RSPIS+AAA IY+ +Q SDDK+  K+
Sbjct: 211 FMSRFCSNLGLPNMVQRAATHIARKAVELDIVPGRSPISVAAAAIYMASQASDDKRVQKE 270

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SYK +YPH +K+ P
Sbjct: 271 IGDIAGVADVTIRQSYKLMYPHATKLFP 298

[32][TOP]
>UniRef100_UPI0001758201 PREDICTED: similar to Transcription initiation factor IIB (General
           transcription factor TFIIB) n=1 Tax=Tribolium castaneum
           RepID=UPI0001758201
          Length = 313

 Score =  132 bits (332), Expect = 2e-29
 Identities = 74/148 (50%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +K+EIGR  + I+K L         +  I  GD
Sbjct: 158 SACLYIACRQEGVPRTFKEICAVSK-ISKREIGRCFKLILKAL------ETSVDLITTGD 210

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL + +   +AA    +KA E DI   RSPIS+AAA IY+ +Q S+DK+  K+
Sbjct: 211 FMSRFCSNLGLPNMVQRAATHIARKAVELDIVPGRSPISVAAAAIYMASQASEDKRSQKE 270

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SYK +YPH  K+ P
Sbjct: 271 IGDIAGVADVTIRQSYKLMYPHAVKLFP 298

[33][TOP]
>UniRef100_UPI00015B5246 PREDICTED: similar to Transcription initiation factor IIB (General
           transcription factor TFIIB) n=1 Tax=Nasonia vitripennis
           RepID=UPI00015B5246
          Length = 315

 Score =  132 bits (331), Expect = 3e-29
 Identities = 73/148 (49%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLILKAL------ETSVDLITTGD 212

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL + +   +AA    +KA + DI   RSPIS+ AA IY+ +Q SDDKK  K+
Sbjct: 213 FMSRFCSNLGLPNMVQRAATHIARKAVDIDIVPGRSPISVTAAAIYMASQASDDKKSQKE 272

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SYK ++PH +++ P
Sbjct: 273 IGDIAGVADVTIRQSYKLMFPHAARLFP 300

[34][TOP]
>UniRef100_C3ZCP1 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
           RepID=C3ZCP1_BRAFL
          Length = 319

 Score =  131 bits (329), Expect = 4e-29
 Identities = 75/148 (50%), Positives = 98/148 (66%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQE  PRT KEIC+++   +KKEIGR  + I+K L      SVE+  I  GD
Sbjct: 164 AACLYIACRQEGVPRTFKEICAISR-VSKKEIGRVFKLILKALET----SVEL--ITTGD 216

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNLN+  Q  +AA    +KA E D+   RSPIS+AAA IY+ +Q S++K+  K+
Sbjct: 217 FMSRFCSNLNLPSQVQRAATHIARKAVELDLVPGRSPISVAAAAIYMASQASEEKRTQKE 276

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP   ++ P
Sbjct: 277 IGDIAGVADVTIRQSYRLIYPRAHELFP 304

[35][TOP]
>UniRef100_B4NZP8 GE18945 n=1 Tax=Drosophila yakuba RepID=B4NZP8_DROYA
          Length = 315

 Score =  129 bits (323), Expect = 2e-28
 Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  +  +K L         +  I   D
Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC+NL++ +   +AA    KKA E DI   RSPIS+AAA IY+ +Q S+ K+  KD
Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKD 272

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SYK +YPH +K+ P
Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300

[36][TOP]
>UniRef100_B5DHX4 GA27746 n=1 Tax=Drosophila pseudoobscura pseudoobscura
           RepID=B5DHX4_DROPS
          Length = 314

 Score =  127 bits (319), Expect = 6e-28
 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  +  +K L         +  I   D
Sbjct: 159 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC+NL++ +   +AA    KKA E DI   RSPIS+AAA IY+ +Q S+ K+  K+
Sbjct: 212 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 271

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SYK +YPH +K+ P
Sbjct: 272 IGDIAGVADVTIRQSYKLMYPHAAKLFP 299

[37][TOP]
>UniRef100_B4KHS4 GI20422 n=2 Tax=Drosophila RepID=B4KHS4_DROMO
          Length = 315

 Score =  127 bits (319), Expect = 6e-28
 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  +  +K L         +  I   D
Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC+NL++ +   +AA    KKA E DI   RSPIS+AAA IY+ +Q S+ K+  K+
Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 272

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SYK +YPH +K+ P
Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300

[38][TOP]
>UniRef100_B4JPZ0 GH13607 n=1 Tax=Drosophila grimshawi RepID=B4JPZ0_DROGR
          Length = 315

 Score =  127 bits (319), Expect = 6e-28
 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  +  +K L         +  I   D
Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC+NL++ +   +AA    KKA E DI   RSPIS+AAA IY+ +Q S+ K+  K+
Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 272

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SYK +YPH +K+ P
Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300

[39][TOP]
>UniRef100_B4HWP7 GM18405 n=1 Tax=Drosophila sechellia RepID=B4HWP7_DROSE
          Length = 315

 Score =  127 bits (319), Expect = 6e-28
 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  +  +K L         +  I   D
Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC+NL++ +   +AA    KKA E DI   RSPIS+AAA IY+ +Q S+ K+  K+
Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 272

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SYK +YPH +K+ P
Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300

[40][TOP]
>UniRef100_Q9NHP7 Transcription initiation factor IIB n=1 Tax=Drosophila virilis
           RepID=TF2B_DROVI
          Length = 293

 Score =  127 bits (319), Expect = 6e-28
 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  +  +K L         +  I   D
Sbjct: 138 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 190

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC+NL++ +   +AA    KKA E DI   RSPIS+AAA IY+ +Q S+ K+  K+
Sbjct: 191 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 250

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SYK +YPH +K+ P
Sbjct: 251 IGDIAGVADVTIRQSYKLMYPHAAKLFP 278

[41][TOP]
>UniRef100_P29052 Transcription initiation factor IIB n=6 Tax=Sophophora
           RepID=TF2B_DROME
          Length = 315

 Score =  127 bits (319), Expect = 6e-28
 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  +  +K L         +  I   D
Sbjct: 160 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKAL------ETSVDLITTAD 212

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC+NL++ +   +AA    KKA E DI   RSPIS+AAA IY+ +Q S+ K+  K+
Sbjct: 213 FMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKE 272

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SYK +YPH +K+ P
Sbjct: 273 IGDIAGVADVTIRQSYKLMYPHAAKLFP 300

[42][TOP]
>UniRef100_Q7QG89 AGAP009558-PA n=1 Tax=Anopheles gambiae RepID=Q7QG89_ANOGA
          Length = 316

 Score =  127 bits (318), Expect = 8e-28
 Identities = 73/148 (49%), Positives = 98/148 (66%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  +  +K L      SV++  I   D
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKALAT----SVDL--ITTAD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC+NL++ +   +AA    +KA E DI   RSPIS+AAA IY+ +Q SD+KK  K+
Sbjct: 214 FMSRFCANLDLPNVVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDNKKTHKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YPH +++ P
Sbjct: 274 IGDIAGVADVTIRQSYRLMYPHAAELFP 301

[43][TOP]
>UniRef100_B0WI57 Transcription initiation factor TFIIB n=1 Tax=Culex
           quinquefasciatus RepID=B0WI57_CULQU
          Length = 316

 Score =  127 bits (318), Expect = 8e-28
 Identities = 73/148 (49%), Positives = 97/148 (65%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  +  +K L      SV++  I   D
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKALAT----SVDL--ITTAD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC+NL++ +   +AA    +KA E DI   RSPIS+AAA IY+ +Q SD KK  K+
Sbjct: 214 FMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDQKKTHKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YPH +++ P
Sbjct: 274 IGDIAGVADVTIRQSYRLMYPHAAELFP 301

[44][TOP]
>UniRef100_UPI0000521774 PREDICTED: similar to Transcription initiation factor IIB (General
           transcription factor TFIIB) (S300-II) n=1 Tax=Ciona
           intestinalis RepID=UPI0000521774
          Length = 314

 Score =  126 bits (317), Expect = 1e-27
 Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQE  PRT KEIC+++   +KKEIGR+ + IVK L         +  I +GD
Sbjct: 159 AACLYIACRQEGVPRTFKEICAISR-ISKKEIGRSFKLIVKNL------ETNVEVITSGD 211

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNLN+     + A    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+
Sbjct: 212 FMSRFCSNLNLPPYVQRGATYIARKAVEKDLVAGRSPISVAAAAIYMASQASKEKRSQKE 271

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           IS   GVAE TIR SYK ++P    + P
Sbjct: 272 ISEIAGVAEVTIRQSYKLMHPRAKDLFP 299

[45][TOP]
>UniRef100_UPI0000E479AC PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
           purpuratus RepID=UPI0000E479AC
          Length = 321

 Score =  125 bits (314), Expect = 2e-27
 Identities = 72/163 (44%), Positives = 99/163 (60%), Gaps = 2/163 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQE  PRT KEIC+V+    K+EIGR  + I+K L         +  I  GD
Sbjct: 166 AACLYIACRQEGVPRTFKEICAVSR-VNKREIGRCFKLILKAL------ETNVVLITTGD 218

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL++  +  +AA    +KA+E D+   RSPIS+ AA IY+ +Q S++K+  K+
Sbjct: 219 FMSRFCSNLSLPPKVQRAATHIARKADELDLVAGRSPISVTAAAIYMASQASEEKRSQKE 278

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           I    GVA+ TIR SYK +YP    + P  +     +++L  P
Sbjct: 279 IGEIAGVADVTIRQSYKLIYPKSHDLFPQDFQFATKIEDLPPP 321

[46][TOP]
>UniRef100_UPI00017B0FC9 UPI00017B0FC9 related cluster n=1 Tax=Tetraodon nigroviridis
           RepID=UPI00017B0FC9
          Length = 318

 Score =  125 bits (313), Expect = 3e-27
 Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 163 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 215

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +KK  K+
Sbjct: 216 FMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 275

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP  +++ P
Sbjct: 276 IGDIAGVADVTIRQSYRLIYPRAAELFP 303

[47][TOP]
>UniRef100_UPI00016E2A21 UPI00016E2A21 related cluster n=1 Tax=Takifugu rubripes
           RepID=UPI00016E2A21
          Length = 318

 Score =  125 bits (313), Expect = 3e-27
 Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 163 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 215

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +KK  K+
Sbjct: 216 FMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 275

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP  +++ P
Sbjct: 276 IGDIAGVADVTIRQSYRLIYPRAAELFP 303

[48][TOP]
>UniRef100_Q6B512 General transcription factor II B n=1 Tax=Oreochromis mossambicus
           RepID=Q6B512_OREMO
          Length = 318

 Score =  125 bits (313), Expect = 3e-27
 Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 163 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 215

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +KK  K+
Sbjct: 216 FMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 275

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP  +++ P
Sbjct: 276 IGDIAGVADVTIRQSYRLIYPRAAELFP 303

[49][TOP]
>UniRef100_Q4SSL3 Chromosome 15 SCAF14367, whole genome shotgun sequence. (Fragment)
           n=1 Tax=Tetraodon nigroviridis RepID=Q4SSL3_TETNG
          Length = 344

 Score =  125 bits (313), Expect = 3e-27
 Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 189 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 241

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +KK  K+
Sbjct: 242 FMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 301

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP  +++ P
Sbjct: 302 IGDIAGVADVTIRQSYRLIYPRAAELFP 329

[50][TOP]
>UniRef100_Q17AB9 Transcription initiation factor TFIIB n=1 Tax=Aedes aegypti
           RepID=Q17AB9_AEDAE
          Length = 318

 Score =  125 bits (313), Expect = 3e-27
 Identities = 72/148 (48%), Positives = 97/148 (65%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  +  +K L      SV++  I   D
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKALAT----SVDL--ITTAD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC+NL++ +   +AA    +KA E DI   RSPIS+AAA IY+ +Q SD KK  K+
Sbjct: 214 FMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDQKKTHKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ ++PH +++ P
Sbjct: 274 IGDIAGVADVTIRQSYRLMHPHAAELFP 301

[51][TOP]
>UniRef100_Q17AB8 Transcription initiation factor TFIIB n=1 Tax=Aedes aegypti
           RepID=Q17AB8_AEDAE
          Length = 316

 Score =  125 bits (313), Expect = 3e-27
 Identities = 72/148 (48%), Positives = 97/148 (65%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  +  +K L      SV++  I   D
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKLTLKALAT----SVDL--ITTAD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC+NL++ +   +AA    +KA E DI   RSPIS+AAA IY+ +Q SD KK  K+
Sbjct: 214 FMSRFCANLDLPNTVQRAATHIARKAVEMDIVPGRSPISVAAAAIYMASQASDQKKTHKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ ++PH +++ P
Sbjct: 274 IGDIAGVADVTIRQSYRLMHPHAAELFP 301

[52][TOP]
>UniRef100_A8QEV5 Transcription initiation factor IIB, putative n=1 Tax=Brugia malayi
           RepID=A8QEV5_BRUMA
          Length = 309

 Score =  125 bits (313), Expect = 3e-27
 Identities = 71/148 (47%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACR+E  PRT KEIC+ A+  +KKEIGR  + I+K L         +  I + D
Sbjct: 154 AACLYIACRKEGVPRTFKEICA-ASRVSKKEIGRCFKLIIKSL------ETSLEQITSAD 206

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC NL + H    AA    KKA E D+   RSPISIAAA IY+ +Q S +KK  K+
Sbjct: 207 FMSRFCGNLGLPHSIQAAATRIAKKAVELDLVAGRSPISIAAAAIYMASQASSNKKTAKE 266

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    G AE T++ +YK LYP   ++ P
Sbjct: 267 IGEIAGAAEVTVKQTYKLLYPRAGELFP 294

[53][TOP]
>UniRef100_Q7SX98 General transcription factor IIB n=1 Tax=Danio rerio
           RepID=Q7SX98_DANRE
          Length = 316

 Score =  124 bits (312), Expect = 4e-27
 Identities = 72/148 (48%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +KK  K+
Sbjct: 214 FMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP  + + P
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAADLFP 301

[54][TOP]
>UniRef100_B5XD83 Transcription initiation factor IIB n=1 Tax=Salmo salar
           RepID=B5XD83_SALSA
          Length = 318

 Score =  124 bits (312), Expect = 4e-27
 Identities = 72/148 (48%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 163 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 215

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +KK  K+
Sbjct: 216 FMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 275

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP  + + P
Sbjct: 276 IGDIAGVADVTIRQSYRLIYPRAADLFP 303

[55][TOP]
>UniRef100_A2BIH7 General transcription factor IIB n=1 Tax=Danio rerio
           RepID=A2BIH7_DANRE
          Length = 316

 Score =  124 bits (312), Expect = 4e-27
 Identities = 72/148 (48%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +KK  K+
Sbjct: 214 FMSRFCSNLGLPKQVQMAATYIARKAVELDLVPGRSPISVAAAAIYMASQASAEKKTQKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP  + + P
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAADLFP 301

[56][TOP]
>UniRef100_Q8H7W1 Putative transcription initiation factor IIB n=2 Tax=Oryza sativa
           RepID=Q8H7W1_ORYSJ
          Length = 308

 Score =  124 bits (312), Expect = 4e-27
 Identities = 68/142 (47%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGAT-KKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG 402
           AACL+IACR E  PRT+KE+ SV      KKEIGR +  I + LG E G ++EMG + A 
Sbjct: 160 AACLHIACRNEGNPRTLKELASVMRDCQDKKEIGRMERIIRRHLGEEAGTAMEMGVVRAA 219

Query: 401 DFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPLKD 225
           D+M RF S L M    V+ AQ A +  E+  D+RR+P SIAAAIIY++ Q +  +   +D
Sbjct: 220 DYMSRFGSRLGMGKPEVREAQRAAQTLEDKLDVRRNPESIAAAIIYMVVQRAGAQTSARD 279

Query: 224 ISIATGVAEGTIRNSYKDLYPH 159
           +S A+GVAE TI+ + K+L  H
Sbjct: 280 VSKASGVAEATIKEACKELSQH 301

[57][TOP]
>UniRef100_UPI000194CD4A PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata
           RepID=UPI000194CD4A
          Length = 316

 Score =  124 bits (311), Expect = 5e-27
 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+
Sbjct: 214 FMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASSEKRTQKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP    + P
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301

[58][TOP]
>UniRef100_Q00403 Transcription initiation factor IIB n=5 Tax=Eutheria
           RepID=TF2B_HUMAN
          Length = 316

 Score =  124 bits (311), Expect = 5e-27
 Identities = 72/149 (48%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+
Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
           I    GVA+ TIR SY+ +YP    + PT
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFPT 302

[59][TOP]
>UniRef100_UPI0000D99A17 PREDICTED: general transcription factor IIB n=1 Tax=Macaca mulatta
           RepID=UPI0000D99A17
          Length = 373

 Score =  124 bits (311), Expect = 5e-27
 Identities = 72/149 (48%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 218 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 270

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+
Sbjct: 271 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 330

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
           I    GVA+ TIR SY+ +YP    + PT
Sbjct: 331 IGDIAGVADVTIRQSYRLIYPRAPDLFPT 359

[60][TOP]
>UniRef100_Q63ZH4 LOC494830 protein n=1 Tax=Xenopus laevis RepID=Q63ZH4_XENLA
          Length = 316

 Score =  124 bits (311), Expect = 5e-27
 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETNVDLITTGD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+
Sbjct: 214 FMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP    + P
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301

[61][TOP]
>UniRef100_Q28G23 General transcription factor IIBgeneral transcription factor IIB
           n=2 Tax=Xenopus (Silurana) tropicalis RepID=Q28G23_XENTR
          Length = 316

 Score =  124 bits (311), Expect = 5e-27
 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETNVDLITTGD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+
Sbjct: 214 FMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP    + P
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301

[62][TOP]
>UniRef100_P29054 Transcription initiation factor IIB n=1 Tax=Xenopus laevis
           RepID=TF2B_XENLA
          Length = 316

 Score =  124 bits (311), Expect = 5e-27
 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETNVDLITTGD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+
Sbjct: 214 FMSRFCSNLGLTKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP    + P
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301

[63][TOP]
>UniRef100_A7SH79 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SH79_NEMVE
          Length = 310

 Score =  124 bits (310), Expect = 7e-27
 Identities = 72/162 (44%), Positives = 99/162 (61%), Gaps = 2/162 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT+KEIC++    +KKEIGR  + I+K L         +  I +GD
Sbjct: 155 SACLYIACRQEGVPRTLKEICAIGK-ISKKEIGRCFKLILKHL------ETSVDLITSGD 207

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +     KAA    ++A E D+   RSPISIAAA IY+ +Q S++K+  K+
Sbjct: 208 FMSRFCSNLTLPLSVQKAATYIARRAVELDLVAGRSPISIAAAAIYMASQASEEKRSQKE 267

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSS 99
           I    GVA+ TIR SY+ L+P   ++ P  +     ++ L S
Sbjct: 268 IGDIAGVADVTIRQSYRLLFPKARELFPADFKFAVPIERLPS 309

[64][TOP]
>UniRef100_UPI0000F2BACE PREDICTED: similar to alpha initiation factor n=1 Tax=Monodelphis
           domestica RepID=UPI0000F2BACE
          Length = 316

 Score =  123 bits (309), Expect = 9e-27
 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+
Sbjct: 214 FMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP    + P
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFP 301

[65][TOP]
>UniRef100_UPI0000E80A74 PREDICTED: similar to IIB protein n=1 Tax=Gallus gallus
           RepID=UPI0000E80A74
          Length = 468

 Score =  123 bits (309), Expect = 9e-27
 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 313 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 365

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+
Sbjct: 366 FMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 425

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP    + P
Sbjct: 426 IGDIAGVADVTIRQSYRLIYPRAPDLFP 453

[66][TOP]
>UniRef100_UPI0000ECB339 Transcription initiation factor IIB (General transcription factor
           TFIIB) (S300-II). n=1 Tax=Gallus gallus
           RepID=UPI0000ECB339
          Length = 306

 Score =  123 bits (309), Expect = 9e-27
 Identities = 71/148 (47%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 151 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 203

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+
Sbjct: 204 FMSRFCSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 263

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP    + P
Sbjct: 264 IGDIAGVADVTIRQSYRLIYPRAPDLFP 291

[67][TOP]
>UniRef100_Q3UZJ3 Putative uncharacterized protein n=1 Tax=Mus musculus
           RepID=Q3UZJ3_MOUSE
          Length = 316

 Score =  122 bits (307), Expect = 2e-26
 Identities = 71/149 (47%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+
Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
           I    GVA+ TIR SY+ +YP    + P+
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFPS 302

[68][TOP]
>UniRef100_P62915 Transcription initiation factor IIB n=3 Tax=Murinae
           RepID=TF2B_MOUSE
          Length = 316

 Score =  122 bits (307), Expect = 2e-26
 Identities = 71/149 (47%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+
Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
           I    GVA+ TIR SY+ +YP    + P+
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFPS 302

[69][TOP]
>UniRef100_Q2KIN8 Transcription initiation factor IIB n=1 Tax=Bos taurus
           RepID=TF2B_BOVIN
          Length = 316

 Score =  122 bits (306), Expect = 2e-26
 Identities = 71/149 (47%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+A A IY+ +Q S +K+  K+
Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAEAAIYMASQASAEKRTQKE 273

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
           I    GVA+ TIR SY+ +YP    + PT
Sbjct: 274 IGDIAGVADVTIRQSYRLIYPRAPDLFPT 302

[70][TOP]
>UniRef100_Q7QG90 AGAP009559-PA n=1 Tax=Anopheles gambiae RepID=Q7QG90_ANOGA
          Length = 315

 Score =  120 bits (302), Expect = 6e-26
 Identities = 70/147 (47%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           ACLYIACRQE  PRT KE+C+V + A+KKEIGR  + I K L      +  +  I + DF
Sbjct: 157 ACLYIACRQEGVPRTFKEMCAVCS-ASKKEIGRCFKLITKVL------ATSLDHITSEDF 209

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDI 222
           M+RFCS L + H+  KAA    +KA E D+   RSPIS+AAA IY+ +Q+S     LK +
Sbjct: 210 MQRFCSKLFLPHEVQKAATHIAQKAFEADLVPDRSPISVAAAAIYMASQVSATAMSLKAV 269

Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIP 141
           +   GVAE TI+ SYK ++PH  ++ P
Sbjct: 270 AAIAGVAELTIKQSYKLMHPHAWELFP 296

[71][TOP]
>UniRef100_B3RPB4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
           RepID=B3RPB4_TRIAD
          Length = 340

 Score =  119 bits (297), Expect = 2e-25
 Identities = 74/162 (45%), Positives = 96/162 (59%), Gaps = 2/162 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +A LYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L      +VEM  I   D
Sbjct: 185 SASLYIACRQEGVPRTFKEICAVSK-ISKKEIGRCFKAILKALET----NVEM--ISTQD 237

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNLN+ +   KAA     +A E D+   RSP+S+ AA IY+ +Q SD KK  K+
Sbjct: 238 FMSRFCSNLNLPNYVQKAASHIAHRAIELDLAPGRSPVSVTAAAIYLASQASDTKKSQKE 297

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSS 99
           I    GVA+ TIR SY+ L P    + P  +  +  +  L S
Sbjct: 298 IGDVAGVADVTIRQSYRLLLPRSKDLFPADFVFKTPIDQLPS 339

[72][TOP]
>UniRef100_UPI00017936E7 PREDICTED: similar to Transcription initiation factor IIB (General
           transcription factor TFIIB) n=1 Tax=Acyrthosiphon pisum
           RepID=UPI00017936E7
          Length = 310

 Score =  118 bits (296), Expect = 3e-25
 Identities = 69/148 (46%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +A LYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 155 SASLYIACRQEGVPRTFKEICAVSK-VSKKEIGRVFKLILKAL------ETSVDLITTGD 207

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC NL + +   +AA    KKA E+DI   RSPIS+AAA I++ +Q SD+K+  K+
Sbjct: 208 FMSRFCCNLGLPNMVQRAATHIAKKAVEYDIVPGRSPISVAAAAIFMASQASDEKRSQKE 267

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVAE TI+ SYK +  + + + P
Sbjct: 268 IGDIAGVAEVTIKQSYKLILANATLLFP 295

[73][TOP]
>UniRef100_Q3UNY0 Putative uncharacterized protein n=1 Tax=Mus musculus
           RepID=Q3UNY0_MOUSE
          Length = 316

 Score =  118 bits (295), Expect = 4e-25
 Identities = 70/148 (47%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD 
Sbjct: 162 ACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGDL 214

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDI 222
           M RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+I
Sbjct: 215 MSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEI 274

Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIPT 138
               GVA+ TIR SY+  YP    + P+
Sbjct: 275 GDIAGVADVTIRQSYRLNYPRAPDLFPS 302

[74][TOP]
>UniRef100_UPI000192557A PREDICTED: similar to general transcription factor IIB n=1
           Tax=Hydra magnipapillata RepID=UPI000192557A
          Length = 275

 Score =  117 bits (292), Expect = 8e-25
 Identities = 68/148 (45%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+++    KKEIGR  + I+K L         +  I + D
Sbjct: 120 SACLYIACRQEGVPRTFKEICAISK-IPKKEIGRCFKLILKAL------EASVDIITSED 172

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL++     +AA    ++A E D+   RSP+S+AAA IY+ +Q S DKK  KD
Sbjct: 173 FMSRFCSNLSLPASVQRAATYIARRAMELDLVPGRSPVSVAAAAIYLASQASLDKKSQKD 232

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ L    + + P
Sbjct: 233 IGDIAGVADVTIRQSYRSLVVRAADLFP 260

[75][TOP]
>UniRef100_A8X282 C. briggsae CBR-TTB-1 protein n=1 Tax=Caenorhabditis briggsae AF16
           RepID=A8X282_CAEBR
          Length = 306

 Score =  116 bits (291), Expect = 1e-24
 Identities = 65/148 (43%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACR++  PRT KEIC+V+   +KKEIGR  + I++ L         +  I + D
Sbjct: 151 AACLYIACRKDGVPRTFKEICAVSR-VSKKEIGRCFKIIIRNL------ETNLEQITSAD 203

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC NL + +    AA    K+A + D+   R+PISIAAA IY+ +Q S +K+  K+
Sbjct: 204 FMSRFCGNLYLPNSIQAAATRIAKRAVDMDLVAGRTPISIAAAAIYMASQASGEKRSAKE 263

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    G AE T+R +YK LYP  +++ P
Sbjct: 264 IGDVAGAAEITVRQTYKLLYPKAAELFP 291

[76][TOP]
>UniRef100_C4J4Z3 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=C4J4Z3_MAIZE
          Length = 308

 Score =  115 bits (287), Expect = 3e-24
 Identities = 61/151 (40%), Positives = 97/151 (64%), Gaps = 5/151 (3%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANG--ATKKEIGRAKEYIVKQLGLEKG-QSVEMGTIH 408
           AACLY+ACR    PRT KE+ +      A +K+IG+    I K+LG E G ++++MG + 
Sbjct: 158 AACLYVACRSAGAPRTFKELAAATRDGPAARKDIGKLIALIRKRLGDEAGGEAMDMGVVR 217

Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYI-ITQLSDDKKP 234
           A D++ RF S L +    V+A QEA ++ ++  D+RR+P S AAAI+++ + + +     
Sbjct: 218 AADYVERFGSLLGIGEGEVRAVQEAARRMQDHLDVRRNPDSTAAAIVFMAMERRAGAGSS 277

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           ++D+S ATGVAE TI+ +Y++LYPH   + P
Sbjct: 278 IRDVSAATGVAENTIKQAYRELYPHADLLFP 308

[77][TOP]
>UniRef100_O16991 Transcription initiation factor IIB n=1 Tax=Caenorhabditis elegans
           RepID=TF2B_CAEEL
          Length = 306

 Score =  114 bits (286), Expect = 4e-24
 Identities = 66/148 (44%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACR++  PRT KEIC+V+   +KKEIGR  + IV+ L         +  I + D
Sbjct: 151 AACLYIACRKDGVPRTFKEICAVSR-VSKKEIGRCFKIIVRSL------ETNLEQITSAD 203

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFC NL++ +    AA    K A + D+   R+PISIAAA IY+ +Q S +K+  K+
Sbjct: 204 FMSRFCGNLSLPNSIQAAATRIAKCAVDMDLVAGRTPISIAAAAIYMASQASAEKRSAKE 263

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    G AE T+R +YK LYP   ++ P
Sbjct: 264 IGDVAGAAEITVRQTYKLLYPKALELFP 291

[78][TOP]
>UniRef100_C5YUY1 Putative uncharacterized protein Sb09g027300 n=1 Tax=Sorghum
           bicolor RepID=C5YUY1_SORBI
          Length = 286

 Score =  113 bits (282), Expect = 1e-23
 Identities = 62/151 (41%), Positives = 96/151 (63%), Gaps = 7/151 (4%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANG--ATKKEIGRAKEYIVKQLGLEKGQS---VEMGT 414
           AACLY+ACR+   PRT KE+ +      A +K+IG+    I K+LG E G     +++G 
Sbjct: 134 AACLYVACRRAGAPRTFKELAAATRDGPAARKDIGKLIALIRKRLGDEAGGGEAMMDIGV 193

Query: 413 IHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYI-ITQLSDDK 240
           + A D++ RF S L M    V+A QEA ++ ++  D+RR+P S AAAIIY+ + + +   
Sbjct: 194 VRAADYVARFGSQLGMEAGEVRAVQEAARRMQDQLDVRRNPDSTAAAIIYMAMERRAGAG 253

Query: 239 KPLKDISIATGVAEGTIRNSYKDLYPHVSKI 147
           + ++D+S ATGVAE TI+ +Y++LYPH   +
Sbjct: 254 RSIRDVSAATGVAENTIKQAYRELYPHADML 284

[79][TOP]
>UniRef100_B8B6F7 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=B8B6F7_ORYSI
          Length = 341

 Score =  110 bits (274), Expect = 1e-22
 Identities = 61/156 (39%), Positives = 98/156 (62%), Gaps = 14/156 (8%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVAN--GATKKEIGRAKEYIVKQLGLEK---GQSVEMGT 414
           AACL+ ACR E  PRT+KE+ +  +   ATK+++G+    I + LG+E+    Q+ +M  
Sbjct: 182 AACLHAACRVEGAPRTLKELIAATSDAAATKRDLGKFINAIKRHLGMEERGQDQAADMKA 241

Query: 413 --------IHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIIT 258
                   + AGD++ R+ S + M+ Q   AA+ A  + +  D+RR+P SIAAAI+Y+  
Sbjct: 242 SGGGVGVVVRAGDYLHRYGSAVGMSGQEASAARRAAGRLDSLDVRRNPQSIAAAIVYMAA 301

Query: 257 QLSDD-KKPLKDISIATGVAEGTIRNSYKDLYPHVS 153
           Q S   +K ++++S ATGV+E TI+++YKDL PH +
Sbjct: 302 QGSSGVRKSVREVSAATGVSESTIKDAYKDLCPHAA 337

[80][TOP]
>UniRef100_Q8SRP3 Transcription initiation factor IIB n=1 Tax=Encephalitozoon
           cuniculi RepID=TF2B_ENCCU
          Length = 312

 Score =  108 bits (271), Expect = 2e-22
 Identities = 70/161 (43%), Positives = 91/161 (56%), Gaps = 3/161 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AAC+YIACRQE+ PRT KEI SV     K+EIGR  + I   L         M T+   +
Sbjct: 157 AACIYIACRQEECPRTFKEI-SVMTAVQKREIGRCFKLISPHLE-------RMATMSTEN 208

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL-SDDKKPLK 228
            + RFCS+LN+N +  K A E  K A E      +SP SIAAA+IY++T L  ++KK  K
Sbjct: 209 IIARFCSDLNLNIKIQKIATEIAKAAHELGCLAGKSPDSIAAAVIYMVTNLFPEEKKIQK 268

Query: 227 DISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNL 105
           DI   T V E TI+N+YK+L      IIP     +E +  L
Sbjct: 269 DIQFVTNVTEVTIKNTYKELLTFKYDIIPENMVNKESIDKL 309

[81][TOP]
>UniRef100_UPI000155D43D PREDICTED: similar to general transcription factor IIB, partial n=1
           Tax=Ornithorhynchus anatinus RepID=UPI000155D43D
          Length = 544

 Score =  107 bits (268), Expect = 5e-22
 Identities = 64/148 (43%), Positives = 87/148 (58%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y+A +   + RT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 389 AAAIYMASQASTEKRTQKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 441

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+
Sbjct: 442 FMSRFCSNLGLPKQVQMAATHIARKAVEIDLVPGRSPISVAAAAIYMASQASTEKRTQKE 501

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I    GVA+ TIR SY+ +YP    + P
Sbjct: 502 IGDIAGVADVTIRQSYRLIYPRAPDLFP 529

 Score =  105 bits (263), Expect = 2e-21
 Identities = 62/137 (45%), Positives = 83/137 (60%), Gaps = 2/137 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 295 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 347

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+
Sbjct: 348 FMSRFCSNLGLPKQVQMAATHIARKAVEIDLVPGRSPISVAAAAIYMASQASTEKRTQKE 407

Query: 224 ISIATGVAEGTIRNSYK 174
           I   + +++  I   +K
Sbjct: 408 ICAVSRISKKEIGRCFK 424

[82][TOP]
>UniRef100_Q54FD6 Transcription initiation factor IIB n=1 Tax=Dictyostelium
           discoideum RepID=TF2B_DICDI
          Length = 325

 Score =  106 bits (265), Expect = 1e-21
 Identities = 67/153 (43%), Positives = 89/153 (58%), Gaps = 6/153 (3%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSVEMGTI 411
           AA LYIACRQE   RT KEI ++ N   KKEI R     KE     L L+        TI
Sbjct: 168 AAALYIACRQEHLSRTFKEIAALTN-VPKKEISRCYKIMKETFASVLNLQ--------TI 218

Query: 410 HAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKK 237
            + DF  RFCS L + +   K A+   K A +  I   +SPIS+ AA IY+++QLS +K+
Sbjct: 219 SSEDFTSRFCSTLKLPNDVKKGAEHVSKMAMDMGIVAGKSPISVTAASIYMVSQLSPEKR 278

Query: 236 PLKDISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
             K I+  +GV+E TIRN+YKDLY    ++IP+
Sbjct: 279 TQKQIADVSGVSEVTIRNAYKDLYAKRDQLIPS 311

[83][TOP]
>UniRef100_A3AF21 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
           Group RepID=A3AF21_ORYSJ
          Length = 309

 Score =  105 bits (263), Expect = 2e-21
 Identities = 59/129 (45%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
 Frame = -1

Query: 539 PRTVKEICSVANGAT-KKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLNMN 363
           PRT+KE+ SV      KKEIGR +  I + LG E G ++EMG + A D+M RF S L M 
Sbjct: 174 PRTLKELASVMRDCQDKKEIGRMERIIRRHLGEEAGTAMEMGVVRAADYMSRFGSRLGMG 233

Query: 362 HQAVKAAQEAVKKAEE-FDIRRSPISIAAAIIYIITQLSDDKKPLKDISIATGVAEGTIR 186
              V+ AQ A +  E+  D+RR+P SIAAAIIY++ Q +  +   +D+S A+GVAE TI+
Sbjct: 234 KPEVREAQRAAQTLEDKLDVRRNPESIAAAIIYMVVQRAGAQTSARDVSKASGVAEATIK 293

Query: 185 NSYKDLYPH 159
            + K+L  H
Sbjct: 294 EACKELSQH 302

[84][TOP]
>UniRef100_B9R918 Transcription initiation factor iib, putative n=1 Tax=Ricinus
           communis RepID=B9R918_RICCO
          Length = 89

 Score =  105 bits (261), Expect = 3e-21
 Identities = 51/73 (69%), Positives = 60/73 (82%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLYIACRQE+KPRT KEICSV NGATKKEIGRA+ +I+K L +E G  VE GTIHA D
Sbjct: 18  AACLYIACRQENKPRTPKEICSVVNGATKKEIGRAEVFILKHLEVEMGH-VEAGTIHAAD 76

Query: 398 FMRRFCSNLNMNH 360
           ++RR CSNL + +
Sbjct: 77  YLRRVCSNLGLTN 89

[85][TOP]
>UniRef100_B6JY64 Transcription factor TFIIB n=1 Tax=Schizosaccharomyces japonicus
           yFS275 RepID=B6JY64_SCHJY
          Length = 339

 Score =  100 bits (249), Expect = 8e-20
 Identities = 70/172 (40%), Positives = 97/172 (56%), Gaps = 14/172 (8%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL----------GLEKGQS 429
           AAC+YIACRQ   PRT  EIC++ N A KKEIGR  + + + L             KGQ 
Sbjct: 165 AACIYIACRQGKVPRTFMEICTLTNVA-KKEIGRVYKTLQRMLTEGGALHNSVDAFKGQE 223

Query: 428 -VEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKA--EEFDIRRSPISIAAAIIYIIT 258
            ++  +  A D M RFC+ L +      AA E  ++A  E     RSPISIAA+ IY+I+
Sbjct: 224 YIQNSSTSAEDLMVRFCNRLQLPTFVQLAAAELARRAGQEGTLAGRSPISIAASGIYMIS 283

Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEEDLKNL 105
            L    K  K+IS  TGV++ TIR +YK L+   +K++ P W AK+  + +L
Sbjct: 284 SLMGYPKTPKEISEVTGVSDSTIRIAYKLLHAERNKLVDPKWVAKDRTMDSL 335

[86][TOP]
>UniRef100_UPI00005A11DE PREDICTED: similar to general transcription factor IIB isoform 2
           n=1 Tax=Canis lupus familiaris RepID=UPI00005A11DE
          Length = 273

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 59/119 (49%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLYIACRQE  PRT KEIC+V+   +KKEIGR  + I+K L         +  I  GD
Sbjct: 161 SACLYIACRQEGVPRTFKEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGD 213

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLK 228
           FM RFCSNL +  Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K
Sbjct: 214 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQK 272

[87][TOP]
>UniRef100_UPI0000EBC715 PREDICTED: similar to Transcription initiation factor IIB (General
           transcription factor TFIIB) (S300-II) n=1 Tax=Bos taurus
           RepID=UPI0000EBC715
          Length = 149

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 59/136 (43%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
 Frame = -1

Query: 539 PRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLNMNH 360
           P  + EIC+V+   +KKEIGR  + I+K L         +  I  GDFM RFCSNL +  
Sbjct: 7   PSLIPEICAVSR-ISKKEIGRCFKLILKAL------ETSVDLITTGDFMSRFCSNLCLPK 59

Query: 359 QAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDISIATGVAEGTIR 186
           Q   AA    +KA E D+   RSPIS+AAA IY+ +Q S +K+  K+I    GVA+ TIR
Sbjct: 60  QVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIR 119

Query: 185 NSYKDLYPHVSKIIPT 138
            SY+ +YP    + PT
Sbjct: 120 QSYRLIYPRAPDLFPT 135

[88][TOP]
>UniRef100_A8IM89 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8IM89_CHLRE
          Length = 312

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 9/170 (5%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICS-VANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG 402
           A+CL+ ACRQE +PRT KEI S + N  +KKEIGR  + + +   L+K +    G   A 
Sbjct: 148 ASCLFWACRQEKQPRTFKEIVSCLGNDVSKKEIGRTFKDLQQ---LKKDELHRQGA--AA 202

Query: 401 DFMRRFCSN-LNMNHQAVKAAQEAVKKAEEFDIR-----RSPISIAAAIIYIITQLSDDK 240
           D +   C+  L M+ +  + A++    A+  D R     R+P S+A+A++ I   L++ +
Sbjct: 203 DALASSCNQTLRMDFKWRRLAEDIATAAKPADRRMPWDGRTPTSVASAVVLIAMALAEAR 262

Query: 239 --KPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
             + L  +++ + VAEGTIR  YKDL+PH+ +++PT   ++E+L+ L +P
Sbjct: 263 FDEALSKVAVVSSVAEGTIRGVYKDLFPHLRELVPTESVRDEELQRLPNP 312

[89][TOP]
>UniRef100_C4QEJ3 Transcription initiation factor iib, putative n=2 Tax=Schistosoma
           mansoni RepID=C4QEJ3_SCHMA
          Length = 308

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 55/147 (37%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           ACLY+ACRQE  PRT KE+C+V+   +KKEIG+  + I+K L         + ++   DF
Sbjct: 155 ACLYMACRQEGVPRTFKEVCAVSR-VSKKEIGKVFKKILKIL------ETNVQSVTVEDF 207

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDI 222
           M RFC NLN+N    + A    ++A   ++   RSP+S+AAA IY+       +K  ++I
Sbjct: 208 MSRFCGNLNLNIAVQRVANVVARRALNLNLVAGRSPVSVAAAAIYMAAYALGYRKEKREI 267

Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIP 141
               G AE TI  +Y+ ++   S++ P
Sbjct: 268 GDVAGCAEATITCTYRAMHSRASELFP 294

[90][TOP]
>UniRef100_Q6E6D9 Transcription initiation factor TFIIB n=1 Tax=Antonospora locustae
           RepID=Q6E6D9_ANTLO
          Length = 306

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 63/150 (42%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AAC+YIACRQE  PRT KEI SV     +K+IGRA + I     LEK  +V +      D
Sbjct: 151 AACIYIACRQEGCPRTFKEI-SVLTAVPRKDIGRAYKIIYPH--LEKFVAVSV-----KD 202

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQL-SDDKKPLK 228
            + RFCSNL++ H A K A    +  +  DI   +S  SIAAAI+Y++T + S  K   K
Sbjct: 203 IVSRFCSNLDLGHDAEKLAVAIAQNVQRLDILTGKSTDSIAAAIVYLVTNVFSQHKSMQK 262

Query: 227 DISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
            +   + V + TI+N YK+L  H  ++IP+
Sbjct: 263 FLQNTSNVTDVTIKNVYKELVLHKEEVIPS 292

[91][TOP]
>UniRef100_B7XLJ0 Transcription initiation factor IIB n=1 Tax=Enterocytozoon bieneusi
           H348 RepID=B7XLJ0_ENTBH
          Length = 311

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           AC+YIAC+ E  PRT KEI SV     K+EIG+  + I K++          G +   D 
Sbjct: 158 ACIYIACKTEGCPRTFKEI-SVITVVPKREIGKCYKLISKEIDTT-------GIMATADI 209

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPL-KD 225
           + RFCS+LN+N +    A+   KK ++      RSP SIA+AIIY+   L  D   L KD
Sbjct: 210 VGRFCSDLNLNAKIQNTARYIAKKVQDIGCLAGRSPDSIASAIIYLTLCLYPDFLFLQKD 269

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I   T V + TIRN+YKDL P+  +IIP
Sbjct: 270 IQYVTNVTDVTIRNTYKDLLPYKKEIIP 297

[92][TOP]
>UniRef100_A4S6Z8 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4S6Z8_OSTLU
          Length = 390

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 11/158 (6%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL-GLEKGQSVEMGTIHAG 402
           AACLYIA RQE   RT KE+C  A G T KEIGR  ++I+K   GL    + +M T    
Sbjct: 170 AACLYIAARQEGMTRTFKEVCGAAQGTTVKEIGRCYKFILKVCDGLNMQMNEQMITPEL- 228

Query: 401 DFMRRFCSNLNM-NHQAVKAAQEAV------KKAEEFDIRRSPISIAAAIIYI---ITQL 252
               RFC NL M +H  +K     V      + +E     + P S+AAA I+I   + ++
Sbjct: 229 -LTNRFCGNLGMSDHDFLKLCSHIVRTFRELRDSEGHKSEKQPASVAAAAIFIASVVREM 287

Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
             DK  L  IS  +G+AE TIR S+ D+ P+ S+++P+
Sbjct: 288 HKDKASLFRISEVSGMAEVTIRTSFFDMVPYASRLLPS 325

[93][TOP]
>UniRef100_C1MZY4 Transcription initiation factor n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MZY4_9CHLO
          Length = 370

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL-GLEKGQSVEMGTIHAG 402
           AACLYI+CRQE   RT KEIC  A   T KEIG+  ++IVK + GL      +M  I   
Sbjct: 164 AACLYISCRQEGTNRTFKEICGGAVNTTVKEIGKCYKFIVKTIDGLNTTMMEQM--ITPE 221

Query: 401 DFMRRFCSNLNM-NHQAVKAAQEAV------KKAEEFDIRRSPISIAAAIIYIITQLSDD 243
               RFC NL + N + +K A   +      + +E     + P S+AAA I++  Q+ D 
Sbjct: 222 KLTNRFCGNLGLANLEFLKLATTVIGTFNNLRLSEGHKSEKQPASVAAAAIWLCVQIMDK 281

Query: 242 KK--PLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAK 126
           +    L+ IS  +G+AE TI  SY D+YP+ ++++P  Y +
Sbjct: 282 QHEITLRKISEVSGMAETTITTSYVDMYPYATRMLPRAYVE 322

[94][TOP]
>UniRef100_C4V7B4 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01
           RepID=C4V7B4_NOSCE
          Length = 333

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 63/160 (39%), Positives = 90/160 (56%), Gaps = 3/160 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           AC+YIACR E+ PRT KE+ S+     KKEIG++ + I   +         +  +   D 
Sbjct: 179 ACIYIACRLENCPRTFKEV-SLITSVQKKEIGKSFKLISPHVE-------NLTVVSTKDI 230

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL-SDDKKPLKD 225
           + RFCS+L +N +  + A     K +E  I   +SP SIAAAIIY++T L  + +K  KD
Sbjct: 231 VARFCSDLRLNIKIQRLAFAISAKVQEAGILAGKSPDSIAAAIIYMVTYLVPEGRKVQKD 290

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNL 105
           I   T V E TI+N+YK+L    + IIPT    +E + NL
Sbjct: 291 IQYVTNVTEVTIKNTYKELAIFKNVIIPTDIVSQEAIDNL 330

[95][TOP]
>UniRef100_B7XLT0 Transcription initiation factor IIB n=1 Tax=Enterocytozoon bieneusi
           H348 RepID=B7XLT0_ENTBH
          Length = 213

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 62/148 (41%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           AC+YIAC+ E  PRT KEI SV     K+EIG+  + I K++   +        +   D 
Sbjct: 60  ACIYIACKTEGCPRTFKEI-SVITVVPKREIGKCYKLISKEIDTTR-------IMATADI 111

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPL-KD 225
           + RFCS+LN+N +    A+   KK ++      RSP SIA+AIIY+   L  D   L KD
Sbjct: 112 VGRFCSDLNLNAKIQNTARYIAKKVQDIGCLAGRSPDSIASAIIYLTLCLYPDFLFLQKD 171

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I   T V + TIRN+YKDL P+  +IIP
Sbjct: 172 IQYVTNVTDVTIRNTYKDLLPYKKEIIP 199

[96][TOP]
>UniRef100_C1EIY3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EIY3_9CHLO
          Length = 364

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 11/172 (6%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LYIACRQE   RT KEIC  A   T KEIGR  +YIVK +     Q +E   I    
Sbjct: 164 AASLYIACRQEGTNRTFKEICGGAPNTTVKEIGRCYKYIVKAIDGLNTQMMEQ-MITPEK 222

Query: 398 FMRRFCSNLNMNH-------QAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQL---- 252
              RFC NL + +        AV A   +++  E     + P S+AAA I++  Q+    
Sbjct: 223 LTNRFCGNLGLANLEFLKLATAVIATFRSLRITEGHTSEKQPASVAAAAIWLCVQIWRGE 282

Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP 96
           + +   +K IS  +G+AE TI  SY D+YP+ +K++P  Y   E +  L +P
Sbjct: 283 AAEGIDVKRISEISGMAEATILTSYADMYPYAAKMLPEAYV--ERIPELEAP 332

[97][TOP]
>UniRef100_Q00VJ4 Transcription initiation factor IIB [Oryza sativa (ISS) n=1
           Tax=Ostreococcus tauri RepID=Q00VJ4_OSTTA
          Length = 395

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 62/158 (39%), Positives = 86/158 (54%), Gaps = 11/158 (6%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL-GLEKGQSVEMGTIHAG 402
           AACLYIA RQE   RT KE+C  A G T KEIGR  ++I+K   GL    + +M T    
Sbjct: 173 AACLYIAARQEGMTRTFKEVCGAAQGTTVKEIGRCYKFILKVCDGLNMQMNEQMITPEL- 231

Query: 401 DFMRRFCSNLNM-NHQAVKAAQEAVKKAEEF------DIRRSPISIAAAIIYI---ITQL 252
               RFC NL +  H+ +K     V+  +E          + P S+AAA I+I   +  +
Sbjct: 232 -LTNRFCGNLGIGEHEYLKLCSHIVRTFKELRDSEGHRSEKQPASVAAASIFISAVVKGI 290

Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
             DK  L  IS  +G+AE TIR S+ D+ P+ SK++P+
Sbjct: 291 HKDKASLFRISEVSGMAEVTIRTSFFDMVPYASKLLPS 328

[98][TOP]
>UniRef100_O13749 Transcription initiation factor IIB n=1 Tax=Schizosaccharomyces
           pombe RepID=TF2B_SCHPO
          Length = 340

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 14/166 (8%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL-----------GLEKGQ 432
           AAC+YIACRQ   PRT  EIC++ N   KKEIGR  + + + L            L+  +
Sbjct: 165 AACIYIACRQGKVPRTFMEICTLTN-VPKKEIGRVYKTLQRMLTEGGALHNSVDALKGHE 223

Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKA--EEFDIRRSPISIAAAIIYIIT 258
            ++  +  A D M RFC+ L +      AA E  ++A  +     RSPISIAA+ IY+I+
Sbjct: 224 YIQSSSTSAEDLMVRFCNRLMLPMSVQSAAAELARRAGLQGTLAGRSPISIAASGIYMIS 283

Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKE 123
            L    K  K+IS  TGV++ TIR +YK L+    ++I P W A +
Sbjct: 284 ALMGYPKTPKEISEVTGVSDSTIRIAYKLLHAERKELIDPKWIANK 329

[99][TOP]
>UniRef100_A2STL9 Transcription initiation factor IIB (TFIIB) n=1
           Tax=Methanocorpusculum labreanum Z RepID=A2STL9_METLZ
          Length = 340

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACRQ + PRT+ EI  V+   ++KEIGR   +I ++LGL+      +     GD
Sbjct: 199 AAALYAACRQCNVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLK------LLPTSPGD 251

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS L +  +    A E +K+A E ++   R P  +AAA IYI + LS +++  ++
Sbjct: 252 YVPRFCSGLGLKGEVQSRAMEILKQAGERELTSGRGPTGVAAAAIYISSILSGERRTQRE 311

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 312 VADVAGVTEVTIRNRYKEL 330

[100][TOP]
>UniRef100_C8S6Q6 Transcription factor TFIIB cyclin-related protein n=1
           Tax=Ferroglobus placidus DSM 10642 RepID=C8S6Q6_FERPL
          Length = 328

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACRQ   PRT+ EI + +    +KEIGR   +I ++LGL+      +      D
Sbjct: 187 AAALYAACRQAGVPRTLDEIATYSR-VDRKEIGRTYRFIARELGLK------LLPTSPAD 239

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFC+ L ++ +  K A E +KKAEE ++   R P  +AAA IYI + L+ +++  ++
Sbjct: 240 YVPRFCAALGLSGEVQKKAIEIIKKAEEKELTSGRGPTGVAAAAIYIASILTGERRTQRE 299

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 300 VAEVAGVTEVTIRNRYKEL 318

[101][TOP]
>UniRef100_A2YLM6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=A2YLM6_ORYSI
          Length = 354

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 60/167 (35%), Positives = 91/167 (54%), Gaps = 27/167 (16%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVAN--GATKKEIGRAKEYIVKQLGLEKGQSVEMG---- 417
           AACL+ ACR E  PRT+KE+ +      ATK+++G+    I + LG    +  E G    
Sbjct: 183 AACLHTACRMEGAPRTLKELIAATPDAAATKRDLGKFIHAIKRLLG-SNDEEAEAGQDQA 241

Query: 416 ----------------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPIS 288
                            + A +++ R+ S + M+ Q V AAQ A  + +E  D+RR+P S
Sbjct: 242 GSKATNGCGGGGGAGAVVRASNYLLRYGSAVGMSGQEVSAAQRAASRLDESLDVRRNPQS 301

Query: 287 IAAAIIYIITQLSDD----KKPLKDISIATGVAEGTIRNSYKDLYPH 159
           IAAAIIY+  Q +       K ++++S ATGV+E TI+++YKDL  H
Sbjct: 302 IAAAIIYMAVQRAGGGGGRSKSVREVSAATGVSESTIKDAYKDLCQH 348

[102][TOP]
>UniRef100_Q6Z470 Putative Transcription initiation factor IIB n=1 Tax=Oryza sativa
           Japonica Group RepID=Q6Z470_ORYSJ
          Length = 354

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 60/167 (35%), Positives = 90/167 (53%), Gaps = 27/167 (16%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVAN--GATKKEIGRAKEYIVKQLGLEKGQSVEMG---- 417
           AACL+ ACR E  PRT+KE+ +      ATK+ +G+    I + LG    +  E G    
Sbjct: 183 AACLHTACRMEGAPRTLKELIAATPDAAATKRNLGKFIHAIKRLLG-SNDEEAEAGQDQA 241

Query: 416 ----------------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEE-FDIRRSPIS 288
                            + A +++ R+ S + M+ Q V AAQ A  + +E  D+RR+P S
Sbjct: 242 GSKATNGCGGGGGAGAVVRASNYLLRYGSAVGMSGQEVSAAQRAASRLDESLDVRRNPQS 301

Query: 287 IAAAIIYIITQLSDD----KKPLKDISIATGVAEGTIRNSYKDLYPH 159
           IAAAIIY+  Q +       K ++++S ATGV+E TI+++YKDL  H
Sbjct: 302 IAAAIIYMAVQRAGGGGGRSKSVREVSAATGVSESTIKDAYKDLCQH 348

[103][TOP]
>UniRef100_O28970 Transcription initiation factor IIB n=1 Tax=Archaeoglobus fulgidus
           RepID=TF2B_ARCFU
          Length = 326

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 55/139 (39%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACRQ   PRT+ EI + +    +KEIGR   +I ++LGL+      M T  A D
Sbjct: 185 AAALYAACRQAGVPRTLDEIATYSR-VDRKEIGRTYRFITRELGLKL-----MPTSPA-D 237

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFC+ L ++ +  K A E +KKAEE ++   R P  +AAA +Y+ + L  +++  ++
Sbjct: 238 YIPRFCAALGLSGEVQKKAIEIIKKAEERELTSGRGPTGVAAAALYVASILLGERRTQRE 297

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 298 VAEVAGVTEVTIRNRYKEL 316

[104][TOP]
>UniRef100_Q6CD97 YALI0C02563p n=1 Tax=Yarrowia lipolytica RepID=Q6CD97_YARLI
          Length = 324

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           A  ++IACR  +  RT +EI ++ N  +KKEI R  E + + L     Q+      + G 
Sbjct: 161 ATVIFIACRHANVQRTFQEIGALTN-VSKKEIRRTLELMKRLLEGTNIQAFRSTQTNPGA 219

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
            M R+CS+L +N Q    A++ VK+A+E      RSPIS+AAA IY+   L  +    + 
Sbjct: 220 LMPRYCSHLGLNSQVANLAEDIVKRAKEIGTLDGRSPISVAAAAIYMAAALYGNDMSAQR 279

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKII 144
           +S  TGV++GTI+ SYK LY    K++
Sbjct: 280 VSEKTGVSDGTIKTSYKHLYEAREKLV 306

[105][TOP]
>UniRef100_A7E760 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
           1980 UF-70 RepID=A7E760_SCLS1
          Length = 350

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 61/170 (35%), Positives = 90/170 (52%), Gaps = 20/170 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSVEMG-- 417
           A C++IACRQ D PRT +EI ++    +KK+IGR     +++       +K ++  +G  
Sbjct: 170 AGCIFIACRQCDVPRTFREIYALTK-VSKKDIGRTFKALEKFFASDSSAKKARAEAVGAP 228

Query: 416 ----------TIHAGDFMRRFCSNLNM-NHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                     + +A D   R+CS L + + Q VK +Q   +K         RSP+S+AAA
Sbjct: 229 ASTESYQTTTSTNAKDLCTRYCSQLGLKSQQFVKVSQGLAEKVSTVGDLAGRSPLSVAAA 288

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYA 129
            IY+ + L    K  KDIS   GV++GTIR +YK LY    K+I P W A
Sbjct: 289 CIYMASALLGKPKSAKDISQVAGVSDGTIRTAYKYLYADREKLIEPEWIA 338

[106][TOP]
>UniRef100_A3CSQ6 Transcription initiation factor IIB n=1 Tax=Methanoculleus
           marisnigri JR1 RepID=TF2B_METMJ
          Length = 337

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACRQ   PRT+ EI  V+   ++KEIGR   +I ++LGL+   +  +      D
Sbjct: 196 AAALYAACRQCSVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLLPTSPI------D 248

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS LN+  +    A E +++A E ++   R P  +AAA IYI + L  +++  ++
Sbjct: 249 YVPRFCSGLNLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQRE 308

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 309 VAEVAGVTEVTIRNRYKEL 327

[107][TOP]
>UniRef100_Q0W302 Transcription initiation factor IIB n=1 Tax=uncultured methanogenic
           archaeon RC-I RepID=Q0W302_UNCMA
          Length = 337

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACRQ   PRT+ EI  V+   ++KEIGR   +I ++LGL+   +  +      D
Sbjct: 196 AAALYAACRQNGVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLMPTSPI------D 248

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS L++  +    A E +++A E ++   R P  +AAA IYI + L  +++  ++
Sbjct: 249 YVPRFCSGLSLKGEVQSKAVEILRQAAEKELTSGRGPTGVAAAAIYISSILCGERRTQRE 308

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 309 VANVAGVTEVTIRNRYKEL 327

[108][TOP]
>UniRef100_B8GJQ9 Transcription initiation factor IIB n=1 Tax=Methanosphaerula
           palustris E1-9c RepID=TF2B_METPE
          Length = 334

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACRQ   PRT+ EI  V+   ++KEIGR   +I ++LGL+   +  +      D
Sbjct: 193 AAALYAACRQCSVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLLPTSPI------D 245

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS L +  +    A E +++A E ++   R P  +AAA IYI + L  +++  ++
Sbjct: 246 YVPRFCSGLTLKGEVQSRAVEILRQAAERELTSGRGPTGVAAAAIYISSILGGERRTQRE 305

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 306 VAEVAGVTEVTIRNRYKEL 324

[109][TOP]
>UniRef100_Q2FU09 Transcription initiation factor IIB (TFIIB) n=1
           Tax=Methanospirillum hungatei JF-1 RepID=Q2FU09_METHJ
          Length = 337

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACRQ   PRT+ EI  V+   ++KEIGR   +I ++LGL+   +  +      D
Sbjct: 196 AAALYAACRQCSVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLLPTSPI------D 248

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS L +  +    A E +++A E ++   R P  +AAA IYI + L  +++  ++
Sbjct: 249 YVPRFCSGLQLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQRE 308

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 309 VAEVAGVTEVTIRNRYKEL 327

[110][TOP]
>UniRef100_A0B5T8 Transcription initiation factor IIB n=1 Tax=Methanosaeta
           thermophila PT RepID=TF2B_METTP
          Length = 337

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACRQ + PRT+ EI  V+   ++KEIGR   ++ ++L L+   +  +      D
Sbjct: 196 AAALYAACRQCNVPRTLDEIAEVSR-VSRKEIGRTYRFVSRELSLKLMPTSPI------D 248

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS LN+         E +++A E ++   R P  +AAA IYI + L +D++  ++
Sbjct: 249 YIPRFCSGLNLKGDVQAKGIEILRQAAEKELTSGRGPTGVAAAAIYIASILCNDRRTQRE 308

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 309 VADVAGVTEVTIRNRYKEL 327

[111][TOP]
>UniRef100_A7IAR4 Transcription initiation factor IIB n=1 Tax=Candidatus
           Methanoregula boonei 6A8 RepID=TF2B_METB6
          Length = 334

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACRQ   PRT+ EI  V+   ++KEIGR   +I ++LGL+   +  +      D
Sbjct: 193 AAALYAACRQCSVPRTLDEIAEVSR-VSRKEIGRTYRFISRELGLKLLPTSPI------D 245

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS L +  +    A E +++A E ++   R P  +AAA IYI + L  +++  ++
Sbjct: 246 YVPRFCSGLTLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILGGERRTQRE 305

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 306 VAEVAGVTEVTIRNRYKEL 324

[112][TOP]
>UniRef100_B5I9V2 TFIIB zinc-binding family n=1 Tax=Aciduliprofundum boonei T469
           RepID=B5I9V2_9EURY
          Length = 313

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y ACR+   PRT+ E+   A+   KK+IGRA  ++ K+L L    +       A  
Sbjct: 172 AASIYAACRKVGMPRTLDEVAK-ASELNKKKIGRAYRHLTKELNLNLKPTT------ATS 224

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ +FCS L+++   V  A+E V++A E  I   + P  +AAA IYI   + ++ +  K+
Sbjct: 225 YITQFCSKLHLDKNVVNKAEEIVQQATERGITSGKGPTGVAAAAIYIAANMMNEPRTQKE 284

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I+   GV E TIRN YK++   ++  IP
Sbjct: 285 IAEVAGVTEVTIRNRYKEISSALNVEIP 312

[113][TOP]
>UniRef100_A5UKA1 Transcription initiation factor IIB n=2 Tax=Methanobrevibacter
           smithii RepID=TF2B_METS3
          Length = 310

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACR+ + PRT+ EI  V+   TKKE+GR   ++ ++L      ++++      D
Sbjct: 169 AASLYAACRRCNVPRTLDEIAEVSR-VTKKEVGRTYRFLTREL------NIKLPPTSPVD 221

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L ++ +A   A E ++KA E  +   R P  +AAA +YI + L  ++K  +D
Sbjct: 222 YVPRFASELGLSGEAQSRAIEIIEKAMEKGLTSGRGPTGVAAAALYIASVLLGERKTQRD 281

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 282 VADIAGVTEVTIRNRYKEL 300

[114][TOP]
>UniRef100_Q46CN8 Transcription initiation factor IIB (TFIIB) n=1 Tax=Methanosarcina
           barkeri str. Fusaro RepID=Q46CN8_METBF
          Length = 337

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACRQ   PRT+ EI  V+   ++KEIGR   +I ++L L+   +  +      D
Sbjct: 196 AAALYAACRQCSVPRTLDEIEEVSR-VSRKEIGRTYRFISRELALKLMPTSPI------D 248

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS LN+  +    + E +++A E ++   R P  +AAA IYI + L  +++  ++
Sbjct: 249 YVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQRE 308

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 309 VADVAGVTEVTIRNRYKEL 327

[115][TOP]
>UniRef100_Q12XC2 Transcription initiation factor IIB n=1 Tax=Methanococcoides
           burtonii DSM 6242 RepID=Q12XC2_METBU
          Length = 337

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACRQ   PRT+ EI  V+   ++KEIGR   +I ++L L+   +  +      D
Sbjct: 196 AAALYAACRQCSVPRTLDEIGEVSR-VSRKEIGRTYRFISRELSLKLMPTSPI------D 248

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS LN+  +      E +++A E ++   R P  +AAA IYI + L  +++  ++
Sbjct: 249 YVPRFCSGLNLKGEVQSRGVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQRE 308

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 309 VADVAGVTEVTIRNRYKEL 327

[116][TOP]
>UniRef100_Q977U3 Transcription initiation factor IIB n=1 Tax=Methanosarcina mazei
           RepID=TF2B_METMA
          Length = 337

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACRQ   PRT+ EI  V+   ++KEIGR   +I ++L L+   +  +      D
Sbjct: 196 AAALYAACRQCSVPRTLDEIEEVSR-VSRKEIGRTYRFISRELALKLMPTSPI------D 248

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS LN+  +    + E +++A E ++   R P  +AAA IYI + L  +++  ++
Sbjct: 249 YVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQRE 308

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 309 VADVAGVTEVTIRNRYKEL 327

[117][TOP]
>UniRef100_Q8TT29 Transcription initiation factor IIB n=1 Tax=Methanosarcina
           acetivorans RepID=TF2B_METAC
          Length = 337

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACRQ   PRT+ EI  V+   ++KEIGR   +I ++L L+   +  +      D
Sbjct: 196 AAALYAACRQCSVPRTLDEIEEVSR-VSRKEIGRTYRFISRELALKLMPTSPI------D 248

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS LN+  +    + E +++A E ++   R P  +AAA IYI + L  +++  ++
Sbjct: 249 YVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILCGERRTQRE 308

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 309 VADVAGVTEVTIRNRYKEL 327

[118][TOP]
>UniRef100_Q4P519 Putative uncharacterized protein n=1 Tax=Ustilago maydis
           RepID=Q4P519_USTMA
          Length = 375

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 20/164 (12%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLE-------------- 441
           AA +Y+AC+    PRT  EICS+ +  +KK IG+  + + +  GL               
Sbjct: 194 AAAIYVACKMNHVPRTFPEICSLTS-VSKKHIGQCFKEMQQAFGLNATGTGSVDGSRASA 252

Query: 440 --KGQS--VEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAA 279
              G S  + +G   A D + R+C++L +  +  ++ ++   +  E  I   RSPI+IAA
Sbjct: 253 NNSGTSTPIGIGPTGAADLVGRYCNHLGLEMRITRSTEDITARVRELGILAGRSPITIAA 312

Query: 278 AIIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKI 147
           A IY  T L    K  K IS A GV++ TI+NS+K+L  H  KI
Sbjct: 313 ACIYFSTLLWGVDKGAKRISQAAGVSDVTIKNSFKELLKHKDKI 356

[119][TOP]
>UniRef100_A6SQ01 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
           B05.10 RepID=A6SQ01_BOTFB
          Length = 348

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 20/170 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSVEMGTI 411
           A C++IACRQ   PRT +EI ++    +KK+IGR     +++       +K  +   G +
Sbjct: 169 AGCIFIACRQCGVPRTFREIYALTK-VSKKDIGRTFKALEKFFASDSSAKKATADATGAL 227

Query: 410 ------------HAGDFMRRFCSNLNM-NHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                       +A D   R+CS L + + Q VK +Q   +K         RSP+S+AAA
Sbjct: 228 AAPDGYQTTTSTNAKDLCTRYCSQLGLKSQQFVKISQGLAEKVSTVGDLAGRSPLSVAAA 287

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYA 129
            IY+ + L    K  K+IS   GV++GTIR +YK LY    K+I P W A
Sbjct: 288 CIYMASALLGKPKSAKEISQVAGVSDGTIRTAYKYLYADREKLIEPEWIA 337

[120][TOP]
>UniRef100_C4YA24 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
           42720 RepID=C4YA24_CLAL4
          Length = 349

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 14/162 (8%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ----------- 432
           AA ++I CR+    RT KEI ++ N   KKEIG+  + I+K++  EK +           
Sbjct: 173 AAAIFIGCRKAKVARTFKEIWALTN-VPKKEIGKVFK-IIKRVIQEKNETNPGAYSLIKD 230

Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258
           S +     A D +RRFCS+L ++++   AA+   ++ +E  I   RSPI+IAA +IY+ +
Sbjct: 231 SEQTTQTSAEDLIRRFCSHLGLSNEVTNAAEYIARRCKESGILAGRSPITIAATVIYMTS 290

Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
            L   +     I+  TGV++GTI+ S K +Y    K+I P+W
Sbjct: 291 LLFGAEVTPSKIANKTGVSDGTIKTSLKVMYEDREKLIDPSW 332

[121][TOP]
>UniRef100_B9W7D6 Transcription initiation factor IIB, putative (General
           transcription factor tfiib, putative) (Transcription
           factor e, putative) n=1 Tax=Candida dubliniensis CD36
           RepID=B9W7D6_CANDC
          Length = 344

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 14/162 (8%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432
           AA ++I CR+ +  R+ KEI ++ N   +KEIG+  + I+ ++  EK             
Sbjct: 171 AASIFIGCRKANVARSFKEIWALTN-VPRKEIGKVFK-IMDKIIREKNAANPNAAYYGQD 228

Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258
           S++     A D +RRFCS+L +N Q    A+   ++ +E  +   RSP +IAA +IY+ +
Sbjct: 229 SIQTTQTSAEDLIRRFCSHLGVNTQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAS 288

Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
            +     P   IS  TGV++GTI+ SYK +Y    K+I P+W
Sbjct: 289 LVFGFDLPPSKISDKTGVSDGTIKTSYKYMYEEKEKLIDPSW 330

[122][TOP]
>UniRef100_A5DW20 Transcription initiation factor IIB n=1 Tax=Lodderomyces
           elongisporus RepID=A5DW20_LODEL
          Length = 349

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 13/169 (7%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIG---RAKEYIVKQLGLEKGQS------- 429
           AA ++I CR+    R  KEI ++ N   KKEIG   R  + I+++      Q+       
Sbjct: 175 AASIFIGCRKAKVARLFKEIWALTN-VPKKEIGKVFRIMDRIIQENHAANPQTAAYYSHE 233

Query: 428 -VEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258
            ++     A D +RRFCS+L +N Q   AA+   ++A+E  +   RSP +IAA +IY+  
Sbjct: 234 NIQTTQTSAEDLIRRFCSHLGLNTQVTNAAEHIARRAKEVGVLAGRSPTTIAATVIYMAC 293

Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLK 111
            +     P   IS  TGV++GTI+ S+K LY    K+I  ++ +   +K
Sbjct: 294 MVFGIDMPPSKISDKTGVSDGTIKTSHKYLYEARDKLIDPYWVESGKVK 342

[123][TOP]
>UniRef100_Q9HHK5 Transcription initiation factor IIB 3 n=2 Tax=Halobacterium
           salinarum RepID=TF2B3_HALSA
          Length = 317

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           ACLY ACRQE  PRT++E+  VA    +KEIGR   Y+ ++L      S+E+      ++
Sbjct: 179 ACLYAACRQEGIPRTLEEVTEVAR-IDQKEIGRTYRYVAQEL------SLEIQPTDPKEY 231

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RF S+L ++ + +  A+E +  + E  +   +SP   AAA IY  + L ++KK  +++
Sbjct: 232 LPRFASDLELSEEVIAKAREIIDTSAEQGLLSGKSPSGFAAAAIYAASLLCNEKKTQREV 291

Query: 221 SIATGVAEGTIRNSYKD 171
           +    V E TIRN Y++
Sbjct: 292 ANVANVTEVTIRNRYQE 308

[124][TOP]
>UniRef100_B2WF38 Transcription initiation factor IIB n=1 Tax=Pyrenophora
           tritici-repentis Pt-1C-BFP RepID=B2WF38_PYRTR
          Length = 338

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 25/179 (13%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQS---------- 429
           A C++IACR+ D+ R+ +EI  + N  +KKE+GR   + V +  ++K Q+          
Sbjct: 156 AGCIFIACRKHDQQRSFREIFKMTN-VSKKEVGRT--FKVLEAFIQKSQNNGGPSIAGNG 212

Query: 428 VEMGTIH------------AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPI 291
             + T++            A   M R C+ L +  Q    A+E   +   + +   RSP+
Sbjct: 213 AVIDTVNLLNQKGGTTATSASSLMPRACAKLALGTQVQMVAEECADQVAHYGVAAGRSPL 272

Query: 290 SIAAAIIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEED 117
           SIA A +Y+++ L    K  K+I +A  V++GTIR +YK ++    KII P W AK  D
Sbjct: 273 SIAGACLYLVSHLMGQPKSPKEIGLAVEVSDGTIRTAYKLMHMEQDKIIKPEWIAKGGD 331

[125][TOP]
>UniRef100_Q75AB1 ADR007Cp n=1 Tax=Eremothecium gossypii RepID=Q75AB1_ASHGO
          Length = 354

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 11/156 (7%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQS---------V 426
           A+ + + CR+ +  RT KEI S+ N   KKEIG+    I+K++  EK  S         +
Sbjct: 177 ASVILVGCRRAEVGRTFKEILSLTN-VRKKEIGKTFN-IIKKILREKNDSGFANVDTANI 234

Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL 252
             G  +A  F+ RFCS+L ++ Q   AA+   K A++ ++   RSP++IAA+ IY+   L
Sbjct: 235 STGQTNAETFIPRFCSHLGLSVQVANAAEYIAKHAKDINVLAGRSPLTIAASAIYMANLL 294

Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144
                    IS    V EGT++  YK LY H  K++
Sbjct: 295 FRYNITPSQISATLQVTEGTVKGGYKILYEHKEKVV 330

[126][TOP]
>UniRef100_C5MER5 Transcription initiation factor IIB n=1 Tax=Candida tropicalis
           MYA-3404 RepID=C5MER5_CANTT
          Length = 344

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432
           AA ++I CR+ +  R+ KEI ++ N   +KEIG+  + I+ ++  EK             
Sbjct: 171 AASIFIGCRKANVARSFKEIWALTN-VPRKEIGKVFK-IMDKIIREKNAANPNAAYYTQD 228

Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258
           S+      A D +RRFCS+L +N Q    A+   ++ +E  +   RSP +IAA +IY+ +
Sbjct: 229 SISTTQTSAEDLIRRFCSHLGVNAQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAS 288

Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLK 111
            +     P   IS  TGV++GTI+ SYK +Y    K+I  ++ +   +K
Sbjct: 289 LVFGIDLPPSKISDKTGVSDGTIKTSYKYMYEEKEKLIDPYWVESGKVK 337

[127][TOP]
>UniRef100_Q6KZC9 Transcription initiation factor IIB n=1 Tax=Picrophilus torridus
           RepID=Q6KZC9_PICTO
          Length = 310

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           A  +Y ACR  + PRT+ EI SV     KKEIGR    + + L L    S         D
Sbjct: 169 AGSIYAACRITNVPRTLDEIASVTR-VKKKEIGRTYRIMARYLKLNIMPS------KPED 221

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS L ++ +A K A+E +K A + D+   + P  +AAA IYI + ++ +++  + 
Sbjct: 222 YVNRFCSKLRLSMEARKRAEEILKMAVDNDLTSGKGPTGVAAAAIYIASLITGERRTQRA 281

Query: 224 ISIATGVAEGTIRNSYKDL 168
           I+   GV E TIRN YK+L
Sbjct: 282 IAEVAGVTEVTIRNRYKEL 300

[128][TOP]
>UniRef100_UPI000038E008 transcription initiation factor IIB n=1 Tax=Ferroplasma acidarmanus
           fer1 RepID=UPI000038E008
          Length = 311

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           A  +Y ACR  + PRT+ EI SV     KKEIGR    + + L L    S         D
Sbjct: 170 AGSIYAACRITNVPRTLDEIASVTR-VKKKEIGRTYRIMARYLKLNILPS------KPDD 222

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS L ++ +A K A+E +K A + D+   + P  +AAA IYI + ++ +++  + 
Sbjct: 223 YVNRFCSKLRLSMEARKRAEEILKMAIDNDLTSGKGPTGVAAAAIYIASLITGERRTQRA 282

Query: 224 ISIATGVAEGTIRNSYKDL 168
           I+   GV E TIRN YK+L
Sbjct: 283 IAEVAGVTEVTIRNRYKEL 301

[129][TOP]
>UniRef100_Q7S978 Putative uncharacterized protein n=1 Tax=Neurospora crassa
           RepID=Q7S978_NEUCR
          Length = 348

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 18/163 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA---KEYIVKQLGLEKG--------- 435
           A C++IACRQ   PRT +EI S+    +KKEIGR     E  ++++G E+          
Sbjct: 170 AGCIFIACRQTGVPRTFREIYSLTK-VSKKEIGRVFKQLESFLQKIGGEEHAITTSIPTF 228

Query: 434 --QSVEMGTIHAGDFMRRFCSNLNM-NHQAVK--AAQEAVKKAEEFDIR-RSPISIAAAI 273
             Q    G+  A +   R+CSNLN  N  AV+  A Q A K +   ++  RSP+S+AAA 
Sbjct: 229 NQQYQGKGSTTATELCARYCSNLNFRNSVAVEDVARQLADKTSTISELAGRSPLSVAAAC 288

Query: 272 IYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144
           IY+ + + ++ +  K+I+   GV++GT++ +Y+ LY    K++
Sbjct: 289 IYMASHIRNESRTSKEIATVAGVSDGTVKTAYRLLYNKKDKLL 331

[130][TOP]
>UniRef100_Q5AHZ3 Likely transcription factor TFIIB n=1 Tax=Candida albicans
           RepID=Q5AHZ3_CANAL
          Length = 344

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 14/162 (8%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432
           AA ++I CR+ +  R+ KEI ++ N   +KEIG+  + I+ ++  EK             
Sbjct: 171 AASIFIGCRKANVARSFKEIWALTN-VPRKEIGKVFK-IMDKIIREKNAANPNAAYYGQD 228

Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258
           S++     A D +RRFCS+L +N Q    A+   ++ +E  +   RSP +IAA +IY+ +
Sbjct: 229 SIQTTQTSAEDLIRRFCSHLGVNTQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAS 288

Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
            +     P   IS  TGV++GTI+ SYK +Y    ++I P+W
Sbjct: 289 LVFGFDLPPSKISDKTGVSDGTIKTSYKYMYEEKEQLIDPSW 330

[131][TOP]
>UniRef100_Q2H1A6 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
           RepID=Q2H1A6_CHAGB
          Length = 353

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 17/170 (10%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEK--------G 435
           A C++IACRQ + PRT +E+  +    +KKEIGR     + ++ K  G +K         
Sbjct: 171 AGCIFIACRQTNVPRTFREVYGLTK-VSKKEIGRVFKQLESFLQKMGGEDKVAKATGYSQ 229

Query: 434 QSVEMGTIHAGDFMRRFCSNLNMNHQAVK----AAQEAVKKAEEFDIR-RSPISIAAAII 270
           Q    G+  A +   R+CSNL   + AV+    A + A K +E  D+  RSP+S+AAA I
Sbjct: 230 QYTAKGSTTADELCIRYCSNLGFRN-AVRVESVARRLAEKSSEVSDLAGRSPLSVAAACI 288

Query: 269 YIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEE 120
           Y+ + L  + +  K IS+ + V++GT++ +Y+ LY     I+      EE
Sbjct: 289 YMASHLVGEPRSTKQISVVSSVSDGTVKTAYRYLYAAKDTILTKEVFSEE 338

[132][TOP]
>UniRef100_Q6KZC7 Transcription initiation factor IIB n=1 Tax=Picrophilus torridus
           RepID=Q6KZC7_PICTO
          Length = 304

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A +Y ACRQ + PRT+ EI   A+   KK+IG+A  ++ K+L L    +          +
Sbjct: 165 AAIYAACRQVNIPRTLDEISKAAD-INKKKIGKAYRHLAKELKLNLKPTTPYS------Y 217

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + +FC+ LN++   +  ++E +++  E  I   + P  +AAA IYI   +S   K  K+I
Sbjct: 218 VSQFCNKLNLDKDVIIKSEEIIRRVNETGISAGKGPTGVAAAAIYIAAIISGKPKTQKEI 277

Query: 221 SIATGVAEGTIRNSYKDL 168
           S  +GV E TIRN YK++
Sbjct: 278 SKVSGVTEVTIRNRYKEI 295

[133][TOP]
>UniRef100_B9ZEE4 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii
           ATCC 43099 RepID=B9ZEE4_NATMA
          Length = 320

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           + LY ACR+E  PR+++EI  V+    +KEIGR   YI ++LGLE      M  +    +
Sbjct: 182 SALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MRPVDPKKY 234

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RFCS L ++ +    A E ++K  E  +   +SP   AAA IY  + L ++KK  +++
Sbjct: 235 VPRFCSELELSEEVQTKANEIIEKTAEEGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 294

Query: 221 SIATGVAEGTIRNSYKD 171
           +    V E TIRN Y++
Sbjct: 295 ADVAQVTEVTIRNRYQE 311

[134][TOP]
>UniRef100_C8S977 Transcription factor TFIIB cyclin-related protein n=1
           Tax=Ferroglobus placidus DSM 10642 RepID=C8S977_FERPL
          Length = 346

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 44/135 (32%), Positives = 79/135 (58%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y ACR+   PRT+ E+ + ++   K+ +GRA  ++ + LGL+         I + D
Sbjct: 207 AAAVYAACREAGLPRTLDEVAAHSS-VDKRSVGRAYRFLARTLGLKPAP------ITSTD 259

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIITQLSDDKKPLKDIS 219
           ++ + C+ L ++ +  + A E V +AE+  + RSP  +AAA +YI + L  +++  ++++
Sbjct: 260 YVPKICAALGVSGEVQERALEIVNEAEKSMVSRSPAGVAAAAVYIASILLGERRTQREVA 319

Query: 218 IATGVAEGTIRNSYK 174
              GV E TIRN YK
Sbjct: 320 GVAGVTEVTIRNCYK 334

[135][TOP]
>UniRef100_B5IA78 TFIIB zinc-binding family n=1 Tax=Aciduliprofundum boonei T469
           RepID=B5IA78_9EURY
          Length = 312

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 52/139 (37%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y ACR    PRT++EI +V     K+EIGR    + + L L       +      D
Sbjct: 171 AASIYAACRMLGIPRTLEEISTVTR-IKKREIGRVYRIMSRTLKLN------IYPTKPED 223

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS L ++ +  K A E +K A E DI   R P  +AAA IYI   L  +++  ++
Sbjct: 224 YIDRFCSKLKLSGEVKKKAYEIIKMARERDIISGRGPTGVAAAAIYIAAILMGERRTQRE 283

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 284 VAEVAGVTEVTIRNRYKEL 302

[136][TOP]
>UniRef100_C4YES1 Transcription initiation factor IIB n=1 Tax=Candida albicans
           RepID=C4YES1_CANAL
          Length = 344

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 14/162 (8%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432
           AA ++I CR+ +  R+ KEI ++ N   +KEIG+  + I+ ++  EK             
Sbjct: 171 AASIFIGCRKANVARSFKEIWALTN-VPRKEIGKVFK-IMDKIIREKNAANPNAAYYGQD 228

Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258
           S++     A D +RRFCS+L +N Q    A+   ++ +E  +   RSP +IAA +IY+ +
Sbjct: 229 SIQTTQTSAEDLIRRFCSHLGVNTQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAS 288

Query: 257 QLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
            +     P   IS  TGV++GTI+ SYK +Y    ++I P W
Sbjct: 289 LVFGFDLPPSKISDKTGVSDGTIKTSYKYMYEEKEQLIDPFW 330

[137][TOP]
>UniRef100_Q701V6 Putative transcription initiation factor TFIIB n=1 Tax=uncultured
           crenarchaeote RepID=Q701V6_9CREN
          Length = 304

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACR  + PRT+K+I   +N   KK++ R    ++++L L+      M  +    
Sbjct: 167 AAALYAACRDTETPRTLKDIAHASN-IKKKDVARCYRLLIRELDLK------MPVVDPVK 219

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
            + R  S   ++ +  + A E +KKAE+  I   + P+ +AAA +Y+   ++ + K  KD
Sbjct: 220 CVARIASKSGLSEKTKRKALEILKKAEQGKISAGKDPMGLAAAALYVACVMNGENKTQKD 279

Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
           ++ A GV E TIRN YK L  H+
Sbjct: 280 VAEAAGVTEVTIRNRYKGLKIHL 302

[138][TOP]
>UniRef100_B5IV88 TFIIB zinc-binding family n=1 Tax=Thermococcus barophilus MP
           RepID=B5IV88_9EURY
          Length = 306

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AACLY ACR    PRT+ EI  VA    KKEIGR+  +I ++L L    +  +      D
Sbjct: 165 AACLYAACRMAKVPRTLDEIEEVAR-VDKKEIGRSYRFIARELHLRLTPTSPI------D 217

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF   L ++ +    A + ++KA +  +   R P+ +AAA +YI + L  +KK  ++
Sbjct: 218 YVSRFADQLGLSERTKNRAVKILQKAIKLGLTSGRGPMGVAAAALYIASVLEGEKKTQRE 277

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++    V E T+RN YK+L
Sbjct: 278 VAEVAHVTEVTVRNRYKEL 296

[139][TOP]
>UniRef100_O23215 Transcription initiation factor like protein n=1 Tax=Arabidopsis
           thaliana RepID=O23215_ARATH
          Length = 503

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 56/154 (36%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           ACL  A R+  +PRT++EI S+A    +KEIG+  + + + L L +  +    ++H    
Sbjct: 178 ACLVQAIREAQEPRTLQEI-SIAANVQQKEIGKYIKILGEALQLSQPINSNSISVH---- 232

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
           M RFC+ L +N    K+AQE      E      F  RR+PISI+AA IY+  QL D +K 
Sbjct: 233 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 288

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
             +I   TG+ E T+R  YK+L  +   ++P+ Y
Sbjct: 289 QAEICKITGLTEVTLRKVYKELLENWDDLLPSNY 322

[140][TOP]
>UniRef100_Q0UK00 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
           RepID=Q0UK00_PHANO
          Length = 346

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 18/176 (10%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMG------ 417
           A C++IACR   + R+ +EI  + N  +KKE+GR  + +  +  L+K Q V         
Sbjct: 171 AGCIFIACRNHGQQRSFREIFKMTN-VSKKEVGRTFKAL--EAFLQKNQKVGTASSNLLH 227

Query: 416 ---------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAII 270
                    T  A + M R C+ L +       A+E  +   E  I   RSP+SIA A++
Sbjct: 228 DTTNFQTGVTTSAENLMPRACNKLGLETYIQLVAEECARTVTEHGIAAGRSPLSIAGAVL 287

Query: 269 YIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEEDLKNL 105
           Y+++ L    K  K+I +A  V++GTIR +YK ++   +KII   W  +  D   L
Sbjct: 288 YLVSHLMGTPKTPKEIGLAVEVSDGTIRTAYKLMHAQANKIIKEDWIRRGGDRSKL 343

[141][TOP]
>UniRef100_B7XLP2 Transcription initiation factor IIB n=1 Tax=Enterocytozoon bieneusi
           H348 RepID=B7XLP2_ENTBH
          Length = 310

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           AC+YIAC+ E  PRT +EI SV     K+EIG+  + I K++   +  + +  ++   DF
Sbjct: 158 ACIYIACKTEGCPRTFQEI-SVITVVPKREIGKCYKLISKEMTRPESWAPQTLSV---DF 213

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPL-KD 225
                + LN+N +    A+   KK ++      RSP SIA+AIIY+   L  D   L KD
Sbjct: 214 -----APLNLNAKIQNTARYIAKKVQDIGCLAGRSPDSIASAIIYLTLCLYPDFLFLQKD 268

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I   T V + TIRN+YKDL P+  +IIP
Sbjct: 269 IQYVTNVTDVTIRNTYKDLLPYKKEIIP 296

[142][TOP]
>UniRef100_A8NYV2 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
           okayama7#130 RepID=A8NYV2_COPC7
          Length = 662

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMG---TIH 408
           AAC++IACR+   PRT +EIC++    +KK +G+  + + + L L   +S+ +    T  
Sbjct: 493 AACIFIACRKAHVPRTFREICNLTR-VSKKMLGQCYKALEQSLNLSGPESMPLANTPTTG 551

Query: 407 AGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKP 234
               + R+C++L++         E +  A    I   RSPISIA   IY    L    KP
Sbjct: 552 PEKLLVRYCNHLDLPANVQAICSEIIVNARNHGIADGRSPISIAGGAIYFTCLLLGKPKP 611

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKII 144
           +++IS   GV+EGTI+  Y+  Y    K++
Sbjct: 612 IREISAVAGVSEGTIKLVYRLYYNDREKLV 641

[143][TOP]
>UniRef100_C5U6X1 Transcription factor TFIIB cyclin-related protein n=1
           Tax=Methanocaldococcus infernus ME RepID=C5U6X1_9EURY
          Length = 320

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y ACR+   PRT+ EI  V+    KKEIGR   ++ ++L       +++   +  D
Sbjct: 179 AATIYAACRKYRVPRTLDEIAEVSR-VDKKEIGRTYRFLAREL------KIKLAPTNPID 231

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L +  +    A + +KKA E  +   R P  +AAA IYI + L   ++  ++
Sbjct: 232 YVPRFASELGLPGEVESKAIQILKKAAEKGLTSGRGPTGVAAAAIYIASVLLGHRRTQRE 291

Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
           ++   GV E TIRN YK+L  H+
Sbjct: 292 VAEVAGVTEVTIRNRYKELTEHL 314

[144][TOP]
>UniRef100_Q0CNZ3 Transcription initiation factor IIB n=1 Tax=Aspergillus terreus
           NIH2624 RepID=Q0CNZ3_ASPTN
          Length = 351

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 21/181 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVK--QLGLEKGQSVEMG---- 417
           A C++IACRQ + PRT +EI +V    ++KEIGR  + + K  Q   ++ Q+  +     
Sbjct: 171 AGCIFIACRQRNVPRTFQEIFAVTK-VSRKEIGRIYKALEKFFQAQNKERQNAVLSSGGV 229

Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQE-AVKKAEEFDIR-RSPISIAAA 276
                      T    D   RFC+ L++ +Q    +   A     + D+  RSP+SI AA
Sbjct: 230 PDPNDTYTATTTTRPSDLCNRFCNLLDLPYQVTSVSSALADHVTTKGDLAGRSPLSIVAA 289

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNLS 102
            IY+ + L    KP K+IS    V++ TIR +YK LY    +++ P W    + +LKNL 
Sbjct: 290 CIYMASYLMGHGKPAKEISTVAHVSDSTIRGAYKQLYAKRERLVDPEWIKDGKGNLKNLP 349

Query: 101 S 99
           S
Sbjct: 350 S 350

[145][TOP]
>UniRef100_Q3IMH4 Transcription initiation factor TFB 8 n=1 Tax=Natronomonas
           pharaonis DSM 2160 RepID=Q3IMH4_NATPD
          Length = 325

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A LY ACR+E  PR+++EI  V+    +KEIGR   YI ++LGLE      M  +    +
Sbjct: 187 AALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MEPVDPQKY 239

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RFCS L ++ +    A++ ++   E  +   +SP   AAA IY  + L ++KK  +++
Sbjct: 240 VPRFCSELELSEEVQSKAKDIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 299

Query: 221 SIATGVAEGTIRNSYKD 171
           +    V E TIRN Y++
Sbjct: 300 AEVAQVTEVTIRNRYQE 316

[146][TOP]
>UniRef100_B6YXB2 Transcription initiation factor IIB n=1 Tax=Thermococcus onnurineus
           NA1 RepID=B6YXB2_THEON
          Length = 303

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 48/148 (32%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +A LY ACR E  PRT+ EI +V+   TKKEIGR+  ++ + LGL    +  +      +
Sbjct: 162 SAALYAACRMEGIPRTLDEIAAVSK-VTKKEIGRSYRFLARGLGLNLRPTSPI------E 214

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF  +L+++ +  K A+E +++A +  I   + P  +AAA +Y+ + L  +KK  ++
Sbjct: 215 YIDRFGDSLDVSQRTKKRAKEILQEAIKRGITSGKGPTGLAAAALYVASLLEGEKKTQRE 274

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           ++    V E T+RN YK+L   +   +P
Sbjct: 275 VAEVAHVTEVTVRNRYKELVEKLGINVP 302

[147][TOP]
>UniRef100_Q93YB0 TFIIB-related protein (Fragment) n=1 Tax=Spinacia oleracea
           RepID=Q93YB0_SPIOL
          Length = 414

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           ACL  A R+  +PRT++EI S+A    +KEIG+  + + + L L +  +     +H    
Sbjct: 171 ACLVQAIREAQEPRTLQEI-SIAANLPQKEIGKYIKILGEALQLSQPINSNSIAVH---- 225

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
           M RFC+ L +N    K+AQE      E      F  RR+PISI+AA IY+  QL D +K 
Sbjct: 226 MPRFCNLLQLN----KSAQELATHIGEVVMNKCFCTRRNPISISAAAIYLACQLEDRRKT 281

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
             +I   TG+ E T+R  YK+L  +   ++P+ Y
Sbjct: 282 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY 315

[148][TOP]
>UniRef100_Q6Z467 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
           Group RepID=Q6Z467_ORYSJ
          Length = 362

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 13/121 (10%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVAN--GATKKEIGRAKEYIVKQLGLEK---GQSVEMGT 414
           AACL+ ACR E  PRT+KE+ +  +   ATK+++G+    I + LG+E+    Q+ +M  
Sbjct: 182 AACLHAACRVEGAPRTLKELIAATSDAAATKRDLGKFINAIKRHLGMEERGQDQAADMKA 241

Query: 413 --------IHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRSPISIAAAIIYIIT 258
                   + AGD++ R+ S + M+ Q   AA+ A  + +  D+RR+P SIAAAI+Y+  
Sbjct: 242 SGGGVGVVVRAGDYLHRYGSAVGMSGQEASAARRAAGRLDSLDVRRNPQSIAAAIVYMAA 301

Query: 257 Q 255
           Q
Sbjct: 302 Q 302

[149][TOP]
>UniRef100_Q18KT7 Transcription initiation factor TFB n=1 Tax=Haloquadratum walsbyi
           DSM 16790 RepID=Q18KT7_HALWD
          Length = 329

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           + LY ACR+E  PR+++EI  V+    +KEIGR   YI ++LGLE      M  +    +
Sbjct: 191 SALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MRPVDPKKY 243

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RFCS L+++ +    A E ++   E  +   +SP   AAA IY  + L ++KK  +++
Sbjct: 244 VPRFCSELDLSKEVQSKADEIIETTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 303

Query: 221 SIATGVAEGTIRNSYKD 171
           +    V E TIRN Y++
Sbjct: 304 ADVAQVTEVTIRNRYQE 320

[150][TOP]
>UniRef100_C7NMT2 Transcription factor TFIIB cyclin-related n=1 Tax=Halorhabdus
           utahensis DSM 12940 RepID=C7NMT2_HALUD
          Length = 321

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           + LY ACR+E  PR+++EI  V+    +KEIGR   YI ++LGLE      M  +    +
Sbjct: 183 SALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MEPVDPKKY 235

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RFCS L ++ +    A E ++   E  +   +SP   AAA IY  + L ++KK  +++
Sbjct: 236 VPRFCSELELSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 295

Query: 221 SIATGVAEGTIRNSYKD 171
           +    V E TIRN Y++
Sbjct: 296 ADVAQVTEVTIRNRYQE 312

[151][TOP]
>UniRef100_O26971 Transcription initiation factor IIB n=1 Tax=Methanothermobacter
           thermautotrophicus str. Delta H RepID=TF2B_METTH
          Length = 310

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACR+ + PRT+ EI  V+   +KKE+GR   ++ ++L      ++++      D
Sbjct: 169 AASLYAACRKCNVPRTLDEIAEVSR-VSKKEVGRTYRFLTREL------NIKLPPTSPVD 221

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L ++ +    A E ++ A E  +   R P  +AAA +YI + L  + K  +D
Sbjct: 222 YVPRFASELGLSGEVQSKAIEIIEMAMENGLTSGRGPTGVAAAALYIASVLLGEHKTQRD 281

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 282 VAEVAGVTEVTIRNRYKEL 300

[152][TOP]
>UniRef100_B3T9W7 Putative transcription factor TFIIB repeat protein n=1
           Tax=uncultured marine microorganism HF4000_APKG7N23
           RepID=B3T9W7_9ZZZZ
          Length = 242

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 53/139 (38%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACR+ + PRT+ EI   A+ A+KKE+GR   YI ++L L       +       
Sbjct: 101 AAALYGACRRCEVPRTLSEITE-ASRASKKEVGRTYRYISRELKLN------LQPASPAV 153

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFC  L +      AA   + +A E ++   R P  +AAA IYI + + D +K  K 
Sbjct: 154 YIIRFCRELELPGYVESAAINILNQAIEAELTSGRGPTGVAAAAIYIASVVYDQRKTQKT 213

Query: 224 ISIATGVAEGTIRNSYKDL 168
           I+   GV E TIRN YK+L
Sbjct: 214 IADTVGVTEVTIRNRYKEL 232

[153][TOP]
>UniRef100_Q9HSF7 Transcription initiation factor IIB 7 n=2 Tax=Halobacterium
           salinarum RepID=TF2B7_HALSA
          Length = 323

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           + LY ACR+E  PR+++EI  V+    +KEIGR   YI ++LGLE      M  +    +
Sbjct: 185 SALYAACRKEGIPRSLEEISEVSR-VERKEIGRTYRYISQELGLE------MKPVDPKKY 237

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RFCS L +  +    A E ++   E  +   +SP   AAA IY  + L ++KK  +++
Sbjct: 238 VPRFCSELELTEEVQSKANEIIETTAEEGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 297

Query: 221 SIATGVAEGTIRNSYKD 171
           +    V E TIRN Y++
Sbjct: 298 ADVAQVTEVTIRNRYQE 314

[154][TOP]
>UniRef100_C5G9X7 Transcription initiation factor IIB n=2 Tax=Ajellomyces
           dermatitidis RepID=C5G9X7_AJEDR
          Length = 352

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 62/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
           A C++IACRQ   PRT  EI +V    TKKEIGR   A E       LE+  SV      
Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230

Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                      +    D   RFC+ L++  Q    +     +         RSP+SI AA
Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGDLAGRSPLSIVAA 290

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
            IY+ + L    K  K+IS    V++GTIR +YK LY    ++I P W    + D+KNL
Sbjct: 291 SIYMASFLMGQGKSAKEISSVAHVSDGTIRGAYKQLYAERERLIDPAWIKDGKGDMKNL 349

[155][TOP]
>UniRef100_A3DNM2 Transcription initiation factor IIB (TFIIB) n=1 Tax=Staphylothermus
           marinus F1 RepID=A3DNM2_STAMF
          Length = 309

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y ACR+   PRT+ EI      +++K+I R    ++K+L       +++ T    D
Sbjct: 167 AAAIYAACRELKIPRTLDEIAKHTK-SSRKDIARCYRLLLKEL------DIKVQTSDPID 219

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           F+ R    LN++   +K A E + +A    +     P  +AAA +YI  QLS +++  K+
Sbjct: 220 FIPRIAHALNLSGSVMKKAAEILHRARSLGVTAGNDPAGLAAAAVYIAAQLSGERRTQKE 279

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
           I+   GV E T+RN YK+L   +   +PT
Sbjct: 280 IAHVAGVTEVTVRNRYKELAKELGIDLPT 308

[156][TOP]
>UniRef100_Q05959 Transcription initiation factor IIB n=1 Tax=Kluyveromyces lactis
           RepID=TF2B_KLULA
          Length = 357

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ---------SV 426
           A+ + + CR+ +  R+ KEI S+ N   KKEIG+    I+K +  EK           ++
Sbjct: 177 ASVILVGCRRAEVGRSFKEILSLTN-VRKKEIGKTFT-IIKNILREKNDRGFANIDTSNI 234

Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL 252
             G   A  F+ RFCS+L ++ Q   AA+   K +++ ++   RSPI+IAAA IY+ T L
Sbjct: 235 TTGQTSAETFIPRFCSHLGLSVQVANAAEYIAKHSKDVNVLAGRSPITIAAAAIYMATLL 294

Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144
                    IS    V EGT++  YK LY H  K++
Sbjct: 295 FKLNISPTRISQTLQVTEGTVKGGYKALYEHKEKVV 330

[157][TOP]
>UniRef100_C0S3L3 Transcription initiation factor IIB n=3 Tax=Paracoccidioides
           brasiliensis RepID=C0S3L3_PARBP
          Length = 352

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
           A C++IACRQ   PRT  EI +V    TKKEIGR   A E       LE+  SV      
Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230

Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                      +    D   RFC+ L++  Q    +     +         RSP+SI AA
Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGELAGRSPLSIVAA 290

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
            IY+ + L    K  K+IS    V++GTIR +YK +Y    ++I P W    + D+KNL
Sbjct: 291 SIYMASFLMGQGKSAKEISTVAHVSDGTIRGAYKQIYAERERLIDPAWIKDGKGDMKNL 349

[158][TOP]
>UniRef100_A6RGN6 Transcription initiation factor IIB n=1 Tax=Ajellomyces capsulatus
           NAm1 RepID=A6RGN6_AJECN
          Length = 352

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 62/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
           A C++IACRQ   PRT  EI +V    TKKEIGR   A E       LE+  SV      
Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230

Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                      +    D   RFC+ L++  Q    +     +         RSP+SI AA
Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGELAGRSPLSIVAA 290

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
            IY+ + L    K  K+IS    V++GTIR +YK LY    ++I P W    + DL+NL
Sbjct: 291 SIYMASFLMGQGKTAKEISSVAHVSDGTIRGAYKQLYAERERLIDPAWIKDGKGDLRNL 349

[159][TOP]
>UniRef100_O58594 208aa long hypothetical transcription initiation factor IIB n=1
           Tax=Pyrococcus horikoshii RepID=O58594_PYRHO
          Length = 208

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AAC+YI+CR    PRT+ EI  VA    KK I R    +VK+LGL     +    I    
Sbjct: 67  AACIYISCRLYKVPRTLDEIAKVAK-EDKKVIARVYRLVVKKLGLSSKDML----IRPEY 121

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ +F   L ++ +  + A   + +A++  I   ++P+ +AA+I+YI + L  +++  K+
Sbjct: 122 YIDKFADELEVSERVKRRALRLLNEAKDKGITSGKNPLGLAASILYIASLLEGERRTQKE 181

Query: 224 ISIATGVAEGTIRNSYKDL 168
           I+   G+ E TIRN YK+L
Sbjct: 182 IARVAGITEVTIRNRYKEL 200

[160][TOP]
>UniRef100_C6A4U9 Transcription initiation factor IIB 2 n=1 Tax=Thermococcus
           sibiricus MM 739 RepID=C6A4U9_THESM
          Length = 272

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +ACLY ACR  + PRT+ EI   +    KKEIGR+  Y+V++L L+      +   +  D
Sbjct: 131 SACLYAACRIANAPRTLDEIEDFSK-VDKKEIGRSYRYLVRELNLK------LRPTNPVD 183

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF   L +  +  + A   V +A +  +   + P  IAAA IYI + L  +K   ++
Sbjct: 184 YVVRFGDQLGVTEKTKRRAMRIVNQAIKMGLTSGKGPTGIAAAAIYIASLLEGEKMTQRE 243

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
           ++    V E T+RN YK+L   ++  IPT
Sbjct: 244 VAEVARVTEVTVRNRYKELVDKLNIRIPT 272

[161][TOP]
>UniRef100_Q6M176 Transcription initiation factor IIB n=1 Tax=Methanococcus
           maripaludis RepID=TF2B_METMP
          Length = 339

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACR+   PRT+ EI  V+    +KEIGR   +I ++L      ++ +   +  D
Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 250

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L +  +    A   ++KA E  +   R P  +AAA IYI + L   ++  ++
Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGERGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 310

Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
           ++   GV E TIRN YK+L  H+
Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333

[162][TOP]
>UniRef100_A6VI28 Transcription initiation factor IIB n=1 Tax=Methanococcus
           maripaludis C7 RepID=TF2B_METM7
          Length = 339

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACR+   PRT+ EI  V+    +KEIGR   +I ++L      ++ +   +  D
Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 250

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L +  +    A   ++KA E  +   R P  +AAA IYI + L   ++  ++
Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGEKGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 310

Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
           ++   GV E TIRN YK+L  H+
Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333

[163][TOP]
>UniRef100_A9A8Q0 Transcription initiation factor IIB n=1 Tax=Methanococcus
           maripaludis C6 RepID=TF2B_METM6
          Length = 339

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACR+   PRT+ EI  V+    +KEIGR   +I ++L      ++ +   +  D
Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 250

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L +  +    A   ++KA E  +   R P  +AAA IYI + L   ++  ++
Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGEKGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 310

Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
           ++   GV E TIRN YK+L  H+
Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333

[164][TOP]
>UniRef100_A4G0F2 Transcription initiation factor IIB n=1 Tax=Methanococcus
           maripaludis C5 RepID=TF2B_METM5
          Length = 339

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACR+   PRT+ EI  V+    +KEIGR   +I ++L      ++ +   +  D
Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 250

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L +  +    A   ++KA E  +   R P  +AAA IYI + L   ++  ++
Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGEKGLTSSRGPTGVAAAAIYIASVLQGTRRTQRE 310

Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
           ++   GV E TIRN YK+L  H+
Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333

[165][TOP]
>UniRef100_Q6BPC4 DEHA2E14762p n=1 Tax=Debaryomyces hansenii RepID=Q6BPC4_DEBHA
          Length = 346

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 53/170 (31%), Positives = 94/170 (55%), Gaps = 14/170 (8%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG-----------Q 432
           AA ++I CR+    R+ KEI ++ N   +KEIG+  + I+ ++  EK             
Sbjct: 173 AAAIFIGCRKAKVARSFKEIWALTN-VPRKEIGKVFK-IMNKIIQEKNAANPNAYSLIQD 230

Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIIT 258
           +++     A D +RRFCS+L ++ Q   AA+   ++ ++  +   RSPI+IAA +IY+  
Sbjct: 231 NMQTTQTSAEDLIRRFCSHLGLSTQVTNAAEHIARRCKDVGVLAGRSPITIAATVIYMAA 290

Query: 257 QL-SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLK 111
            +   D +P K I+  TGV++GTI+ SYK +Y    ++I  ++ +   +K
Sbjct: 291 LVFGADLQPSK-IADKTGVSDGTIKTSYKVMYEEKERLIDPYWVESGKVK 339

[166][TOP]
>UniRef100_C6HRH5 Transcription initiation protein n=1 Tax=Ajellomyces capsulatus
           H143 RepID=C6HRH5_AJECH
          Length = 352

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
           A C++IACRQ   PRT  EI +V    TKKEIGR   A E       LE+  SV      
Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230

Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                      +    D   RFC+ L++  Q    +     +         RSP+SI AA
Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGELAGRSPLSIVAA 290

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
            IY+ + L    K  K+IS    V++GTIR +YK LY    +++ P W    + DL+NL
Sbjct: 291 SIYMASFLMGQGKTAKEISSVAHVSDGTIRGAYKQLYAERERLVDPAWIKDGKGDLRNL 349

[167][TOP]
>UniRef100_C0NUV9 Transcription initiation protein n=1 Tax=Ajellomyces capsulatus
           G186AR RepID=C0NUV9_AJECG
          Length = 352

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
           A C++IACRQ   PRT  EI +V    TKKEIGR   A E       LE+  SV      
Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VTKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 230

Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                      +    D   RFC+ L++  Q    +     +         RSP+SI AA
Sbjct: 231 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSTGELAGRSPLSIVAA 290

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
            IY+ + L    K  K+IS    V++GTIR +YK LY    +++ P W    + DL+NL
Sbjct: 291 SIYMASFLMGQGKTAKEISSVAHVSDGTIRGAYKQLYAERERLVDPAWIKDGKGDLRNL 349

[168][TOP]
>UniRef100_B9WLX5 Transcription initiation factor IIB, putative (General
           transcription facto tfiib, putative) n=1 Tax=Candida
           dubliniensis CD36 RepID=B9WLX5_CANDC
          Length = 346

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 13/161 (8%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATK---KEIGRAKEYIVKQLGLEKG------QSV 426
           AA + + CR+ D PRT++EI ++ N  TK   K  G  K+ I   L  E        ++ 
Sbjct: 172 AAAILLGCRRADVPRTLEEIRALTNVPTKQIAKVTGLIKKIIRSHLNNEDASTSIVDETS 231

Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ- 255
            + T  A D +RRFCS+L ++     A++   +K  +  +   RSP +IAA  I++  + 
Sbjct: 232 SLTTHSAEDLIRRFCSHLGLSLTITSASEYVARKCHDLGVLAGRSPTTIAATSIFLAAKS 291

Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
           L D K   + I   TGV+ GTI+NSYK L  +   +I P W
Sbjct: 292 LGDTKLTQQQIRDKTGVSIGTIKNSYKILQENAKDLIDPAW 332

[169][TOP]
>UniRef100_B0CXM4 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
           RepID=B0CXM4_LACBS
          Length = 349

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402
           AAC++IACRQ   PRT +EIC + +  +KK +G+  + + +   L  G S    + +   
Sbjct: 179 AACIFIACRQAHVPRTFREICDLTH-VSKKILGQCYKALEQAFNLTPGASAAHASNNPAT 237

Query: 401 ---DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKK 237
              + + R+C++L++         + +  A +  I   RSP+SIA   IY    L    K
Sbjct: 238 GPENLLVRYCNHLDLPPNVQSICSDIIVAARKHGIADGRSPVSIAGGAIYFTCYLLGKNK 297

Query: 236 PLKDISIATGVAEGTIRNSYKDLYPHVSKII 144
             +DIS   GV+EGTIR  Y+  Y    K++
Sbjct: 298 SPRDISAVAGVSEGTIRLVYRLYYAEKEKLV 328

[170][TOP]
>UniRef100_A4RNY3 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
           RepID=A4RNY3_MAGGR
          Length = 371

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 24/161 (14%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSV----- 426
           A C++IACR E  PRT +EI ++ N  +KKEIGR     +EY+ K     +G +      
Sbjct: 173 AGCIFIACRMEKVPRTFREIHALTN-VSKKEIGRTYKALEEYVKKVNYENRGGAAAVDHK 231

Query: 425 ---------EMGT--IHAGDFMRRFCSNLN--MNHQAVKAAQEAVKKAEEF-DIR-RSPI 291
                    +M T    A     R+CS L   ++H A + A    +K+    D+  RSP+
Sbjct: 232 MPTADDDDDDMATKGTTAESLCTRYCSILGFRVSHLAERVAMHLARKSSSVADLAGRSPL 291

Query: 290 SIAAAIIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDL 168
           S+AAA IY+++ L  + +  KDI++  GV++GTI+ +YK L
Sbjct: 292 SVAAACIYMMSHLIGEPRTSKDIAVVAGVSDGTIKTAYKFL 332

[171][TOP]
>UniRef100_Q8U2Z1 Transcription initiation factor IIB chain b homolog n=1
           Tax=Pyrococcus furiosus RepID=Q8U2Z1_PYRFU
          Length = 283

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AAC+Y  CR    PRT+ EI S +    KKEI +A   IV+ L L     +   T    D
Sbjct: 139 AACIYATCRLFKVPRTLNEIASYSK-TEKKEIMKAFRVIVRNLNLTPKMLLARPT----D 193

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ +F   L ++ +  +   + +++A E  I   ++P+S+ AA +YI + L  +++  K+
Sbjct: 194 YVDKFADELELSERVRRRTVDILRRANEEGITSGKNPLSLVAAALYIASLLEGERRSQKE 253

Query: 224 ISIATGVAEGTIRNSYKDL 168
           I+  TGV+E T+RN YK+L
Sbjct: 254 IARVTGVSEMTVRNRYKEL 272

[172][TOP]
>UniRef100_A6UR19 Transcription factor TFIIB cyclin-related n=1 Tax=Methanococcus
           vannielii SB RepID=A6UR19_METVS
          Length = 339

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACR+   PRT+ EI  V+    +KEIGR   +I ++L      ++ +   +  D
Sbjct: 198 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPID 250

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L +  +    A   ++KA E  +   R P  +AAA IYI + L   ++  ++
Sbjct: 251 YVPRFASELKLPGEVESKAISILQKAGERGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 310

Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
           ++   GV E TIRN YK+L  H+
Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333

[173][TOP]
>UniRef100_Q2NEL6 Transcription initiation factor IIB n=1 Tax=Methanosphaera
           stadtmanae DSM 3091 RepID=TF2B_METST
          Length = 311

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACR+   PRT+ EI  V+   +KKE+GR   ++ ++L +    +  +      D
Sbjct: 170 AASLYAACRRCKVPRTLDEIADVSR-VSKKEVGRTYRFLTRELHIRLPPTSPI------D 222

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S LN++      A E + +A +  +   R P  +AAA +YI + L  ++K  +D
Sbjct: 223 YVPRFASELNLSGVVQSKAIEIINQAMDNGLTSGRGPTGVAAAALYIASVLLGERKTQRD 282

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 283 VADIAGVTEVTIRNRYKEL 301

[174][TOP]
>UniRef100_Q9FYX3 BAC19.3 n=1 Tax=Solanum lycopersicum RepID=Q9FYX3_SOLLC
          Length = 425

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A L  A R+  +PRT++EI SVA    +KEIG+  + + + L L +  +    ++H    
Sbjct: 178 AALVHAIREAQEPRTLQEI-SVAANLPQKEIGKYIKILGEALQLSQPINSNSISVH---- 232

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
           M RFC+ L +N    K+AQE      E      F  RR+PISI+AA IY+  QL D +K 
Sbjct: 233 MPRFCTLLQLN----KSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKT 288

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
             +I   TG+ E T+R  YK+L  +   ++P+ Y
Sbjct: 289 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSSY 322

[175][TOP]
>UniRef100_Q93WQ2 TFIIB-related protein (Fragment) n=1 Tax=Zea mays
           RepID=Q93WQ2_MAIZE
          Length = 469

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A L  A R+  +PRT++EI S A+   +KEIG+  + + + L L +  +     +H    
Sbjct: 131 AALVQAIREAQQPRTLQEI-STASNLPQKEIGKYIKILGESLKLSQPLNSNSIAVH---- 185

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
           M RFCS L +N    K+AQE      E      F  RR+PISI+AA IY+  QL D +K 
Sbjct: 186 MPRFCSLLQLN----KSAQELAAHIGEVVANKCFCTRRNPISISAAAIYLACQLEDKRKT 241

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
             +I   TG+ E T+R  YK+L  +   ++P  Y
Sbjct: 242 QAEICKVTGLTEVTLRKVYKELLENWDDLLPPDY 275

[176][TOP]
>UniRef100_C5WUN9 Putative uncharacterized protein Sb01g044030 n=1 Tax=Sorghum
           bicolor RepID=C5WUN9_SORBI
          Length = 533

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A L  A R+  +PRT++EI S A+   +KEIG+  + + + L L +  +     +H    
Sbjct: 194 AALVQAIREAQQPRTLQEI-STASNLPQKEIGKYIKILGESLKLSQPLNSNSIAVH---- 248

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
           M RFCS L +N    K+AQE      E      F  RR+PISI+AA IY+  QL D +K 
Sbjct: 249 MPRFCSLLQLN----KSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKT 304

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
             +I   TG+ E T+R  YK+L  +   ++P  Y
Sbjct: 305 QAEICKVTGLTEVTLRKVYKELLENWDDLLPPDY 338

[177][TOP]
>UniRef100_B9VXZ5 Transcription factor IIB n=1 Tax=Capsicum annuum RepID=B9VXZ5_CAPAN
          Length = 426

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A L  A R+  +PRT++EI SVA    +KEIG+  + + + L L +  +    ++H    
Sbjct: 179 AALVHAIREAQEPRTLQEI-SVAANLPQKEIGKYIKILGEALQLSQPINSNSISVH---- 233

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
           M RFC+ L +N    K+AQE      E      F  RR+PISI+AA IY+  QL D +K 
Sbjct: 234 MPRFCTLLQLN----KSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKT 289

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
             +I   TG+ E T+R  YK+L  +   ++P+ Y
Sbjct: 290 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSSY 323

[178][TOP]
>UniRef100_A9XLD7 Putative uncharacterized protein n=1 Tax=Capsicum frutescens
           RepID=A9XLD7_CAPFR
          Length = 426

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A L  A R+  +PRT++EI SVA    +KEIG+  + + + L L +  +    ++H    
Sbjct: 179 AALVHAIREAQEPRTLQEI-SVAANLPQKEIGKYIKILGEALQLSQPINSNSISVH---- 233

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
           M RFC+ L +N    K+AQE      E      F  RR+PISI+AA IY+  QL D +K 
Sbjct: 234 MPRFCTLLQLN----KSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKT 289

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
             +I   TG+ E T+R  YK+L  +   ++P+ Y
Sbjct: 290 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSSY 323

[179][TOP]
>UniRef100_A3AF39 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
           Group RepID=A3AF39_ORYSJ
          Length = 501

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A L  A R+  +PRT++EI S A+   +KEIG+  + + + L L +  +     +H    
Sbjct: 169 AALVQAIREAQEPRTLQEI-STASNLPQKEIGKYIKILGESLKLSQPLNSNSIAVH---- 223

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
           M RFCS L +N    K+AQE      E      F  RR+PISI+AA IY+  QL D +K 
Sbjct: 224 MPRFCSLLQLN----KSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKT 279

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
             +I   TG+ E T+R  YK+L  +   ++P  Y
Sbjct: 280 QAEICKVTGLTEVTLRKVYKELLENWDDLLPPNY 313

[180][TOP]
>UniRef100_A2XDJ3 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=A2XDJ3_ORYSI
          Length = 529

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A L  A R+  +PRT++EI S A+   +KEIG+  + + + L L +  +     +H    
Sbjct: 197 AALVQAIREAQEPRTLQEI-STASNLPQKEIGKYIKILGESLKLSQPLNSNSIAVH---- 251

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
           M RFCS L +N    K+AQE      E      F  RR+PISI+AA IY+  QL D +K 
Sbjct: 252 MPRFCSLLQLN----KSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDKRKT 307

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
             +I   TG+ E T+R  YK+L  +   ++P  Y
Sbjct: 308 QAEICKVTGLTEVTLRKVYKELLENWDDLLPPNY 341

[181][TOP]
>UniRef100_Q59K82 Transcription initiation factor IIB n=1 Tax=Candida albicans
           RepID=Q59K82_CANAL
          Length = 346

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 13/166 (7%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATK---KEIGRAKEYIVKQLGLEKG------QSV 426
           AA + + CR+ D PRT++EI ++ N  TK   K  G  K+ I   L  +        ++ 
Sbjct: 172 AATILLGCRRADVPRTLEEIRALTNVPTKQIAKVTGLIKKIIRSHLNNDDASTSIVDETS 231

Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ- 255
            + T  A D +RRFCS+L ++     A++   +K  +  +   RSP +IAA  I++  + 
Sbjct: 232 SLTTHSAEDLIRRFCSHLGLSLAITSASEYVARKCHDLGVLAGRSPTTIAATSIFLAAKS 291

Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEE 120
           L D K   + I   TGV+ GTI+NSYK L  +   +I P W A  +
Sbjct: 292 LGDTKLTQQQIRDKTGVSIGTIKNSYKILQENAKDLIDPAWEANSK 337

[182][TOP]
>UniRef100_UPI0001983170 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI0001983170
          Length = 540

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A L  A R+  +PRT++EI S+A    +KEIG+  + + + L L +  +    ++H    
Sbjct: 198 AALVQAIREAQEPRTLQEI-SIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH---- 252

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
           M RFC+ L +N    K+AQE      E      F  RR+PISI+AA IY+  QL D +K 
Sbjct: 253 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 308

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
             +I   TG+ E T+R  YK+L  +   ++P+ Y
Sbjct: 309 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY 342

[183][TOP]
>UniRef100_B9S6G3 RNA polymerase II transcription factor, putative n=1 Tax=Ricinus
           communis RepID=B9S6G3_RICCO
          Length = 511

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A L  A R+  +PRT++EI S+A    +KEIG+  + + + L L +  +    ++H    
Sbjct: 178 AALVQAIREAQEPRTLQEI-SIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH---- 232

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
           M RFC+ L +N    K+AQE      E      F  RR+PISI+AA IY+  QL D +K 
Sbjct: 233 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 288

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
             +I   TG+ E T+R  YK+L  +   ++P+ Y
Sbjct: 289 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY 322

[184][TOP]
>UniRef100_A7PUX2 Chromosome chr4 scaffold_32, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7PUX2_VITVI
          Length = 523

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A L  A R+  +PRT++EI S+A    +KEIG+  + + + L L +  +    ++H    
Sbjct: 181 AALVQAIREAQEPRTLQEI-SIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH---- 235

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
           M RFC+ L +N    K+AQE      E      F  RR+PISI+AA IY+  QL D +K 
Sbjct: 236 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 291

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
             +I   TG+ E T+R  YK+L  +   ++P+ Y
Sbjct: 292 QAEICKVTGLTEVTLRKVYKELLENWDDLLPSNY 325

[185][TOP]
>UniRef100_C5P9R2 Transcription initiation factor IIB, putative n=2 Tax=Coccidioides
           RepID=C5P9R2_COCP7
          Length = 353

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 60/179 (33%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
           A C++IACRQ   PRT  EI ++    +KKEIGR   A E       LE+  SV      
Sbjct: 173 AGCIFIACRQCKVPRTFTEIFALTR-VSKKEIGRIYKALEKFFTAQNLERINSVVSSGGV 231

Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                      +    D   RFC+ L++  Q    +     +         RSP+SI AA
Sbjct: 232 PDPNETYTATTSTKPSDLCNRFCNLLDLPFQVTNVSSALADRVTSMGDLAGRSPLSIVAA 291

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
            IY+ + L    K  K+IS    V++GTIR +YK LY    ++I P W    + D+KNL
Sbjct: 292 SIYMASFLMGQGKSAKEISAVAHVSDGTIRGAYKQLYAERERLIDPAWIKDGKGDMKNL 350

[186][TOP]
>UniRef100_C5M3D9 Transcription initiation factor IIB n=1 Tax=Candida tropicalis
           MYA-3404 RepID=C5M3D9_CANTT
          Length = 347

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKK--EIGRA-KEYIVKQLGLEKG------QSV 426
           A+ + + CR+ + PRT++EI ++ N  TK+  +I R  K+ I   L  +        ++ 
Sbjct: 173 ASTILLGCRRAEVPRTLEEIRALTNVPTKQIAKITRLIKKIIHSHLNSDDAAAAIVDETT 232

Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ- 255
            + T  A D +RRFCS+L +N      ++   +K  E  I   RSP +IAA  IY+  + 
Sbjct: 233 NLTTHSAEDLIRRFCSHLGLNPIITNGSEYIARKCNELGILAGRSPTTIAATSIYLAAKV 292

Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
           L D K   + I   TGV+ GTI+NSYK LY    +++ P+W
Sbjct: 293 LGDTKLTQQQIRDKTGVSIGTIKNSYKILYEKARELVDPSW 333

[187][TOP]
>UniRef100_C5DJ37 KLTH0F13200p n=1 Tax=Lachancea thermotolerans CBS 6340
           RepID=C5DJ37_LACTC
          Length = 359

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQS----VEMGTI 411
           A+ + + CR+ +  R+ KEI S+ N   KKEIG+    I+K +  EK  +    ++  TI
Sbjct: 177 ASVILVGCRRAEVGRSFKEILSLTN-VKKKEIGKTFT-IIKSILREKNANGFANIDTATI 234

Query: 410 HAGD-----FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQL 252
            +G      F+ RFCS+L ++ Q   AA+   K  ++ ++   +SPI+IAA+ IY+  QL
Sbjct: 235 SSGQTSAETFIPRFCSHLGLSVQIANAAEYTAKHCKDINVLAGKSPITIAASAIYLAIQL 294

Query: 251 SDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWYAKEEDLKNLSSP*IIEKN 78
                    +S    V EGTI+  YK LY    K++         +   S P + +KN
Sbjct: 295 FKVNISASQVSHTLQVTEGTIKGGYKILYEFRDKVVDPQLIASGKISFDSLPKVNDKN 352

[188][TOP]
>UniRef100_C4QVZ4 Transcription factor TFIIB, a general transcription factor n=1
           Tax=Pichia pastoris GS115 RepID=C4QVZ4_PICPG
          Length = 342

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL--------GLEKGQSVE 423
           AA + +ACR+ + PR+ KE+ ++ +   K EIG+  + I K +        GL   Q+  
Sbjct: 169 AAAIGLACRKANVPRSFKELWALTD-VPKNEIGKVFKIIHKLIQQKHALAGGLLNVQNES 227

Query: 422 MGTI--HAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ 255
           + T   +A   + RFCSNL ++ Q   AA+   ++ +E  +   RSP+++AA +IY+   
Sbjct: 228 IATTQTNAEALIGRFCSNLGLSRQITNAAEYIARRTKEVGVLAGRSPVTVAATVIYMAAS 287

Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
           + D       I+   GV++GTI+ SYK LY    +++ P W
Sbjct: 288 IFDASISPAQIAQRAGVSDGTIKTSYKYLYDKREELVDPQW 328

[189][TOP]
>UniRef100_B6Q1D2 Transcription initiation protein n=1 Tax=Penicillium marneffei ATCC
           18224 RepID=B6Q1D2_PENMQ
          Length = 341

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402
           A C++IACRQ   PRT  EI +V    ++KEIGR  + + K    +  +   +    AG 
Sbjct: 168 AGCIFIACRQCQAPRTFSEIFAVTK-VSRKEIGRIYKSLEKFFTAQNIERTAVVGADAGF 226

Query: 401 ---------DFMRRFCSNLNMNHQAVKAAQEAVKKA-EEFDIR-RSPISIAAAIIYIITQ 255
                    D   RF S L ++++   +A +   +  ++ D+  RSP+SI AA +Y+++ 
Sbjct: 227 KQTTSTKPSDLCERFGSFLGLDYRTWHSAADLSDRVTKDGDLAGRSPLSIVAACLYMVSH 286

Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144
           L    K  K+IS   GV++GTIR +YK LY    ++I
Sbjct: 287 LCGVPKSAKEISAVVGVSDGTIRGAYKQLYAERDRLI 323

[190][TOP]
>UniRef100_B0XXT9 Transcription initiation protein n=2 Tax=Aspergillus fumigatus
           RepID=B0XXT9_ASPFC
          Length = 422

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402
           A C++IACRQ   PRT  EI +V    T+KEIGR  + + K    +  + +       G 
Sbjct: 242 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTAQNLERINAVVSSGGV 300

Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                           D   RFC+ L++ +Q    +     +         RSP+SI AA
Sbjct: 301 PDPNDTYTATTSTKPSDLCNRFCNLLDLPYQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 360

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
            IY+ + L    K  K+IS    V++GTIR +YK LY    ++I P W    + D+KNL
Sbjct: 361 CIYMASYLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDMKNL 419

[191][TOP]
>UniRef100_A3LYP5 Predicted protein n=1 Tax=Pichia stipitis RepID=A3LYP5_PICST
          Length = 350

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 13/161 (8%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKG----------QS 429
           AA ++I CR+    R+ KEI ++ N   +KEIG+  + I K +  +             +
Sbjct: 177 AAAIFIGCRKAKVARSFKEIWALTN-VPRKEIGKVFKIIDKVIQEKNAANPNALMFNQDN 235

Query: 428 VEMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ 255
           ++     A D +RR CS+L +N Q    A+   ++ +E  +   RSP +IAA +IY+   
Sbjct: 236 MQTTQTTAEDLIRRNCSHLGLNAQVTNGAEYIARRCKEVGVLAGRSPTTIAATVIYMAAL 295

Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
           +     P   IS  TGV++GTI+ SYK +Y    K+I P W
Sbjct: 296 VFGIDLPPSKISDKTGVSDGTIKTSYKVMYEEKEKLIDPYW 336

[192][TOP]
>UniRef100_A1D706 Transcription initiation protein n=1 Tax=Neosartorya fischeri NRRL
           181 RepID=A1D706_NEOFI
          Length = 350

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402
           A C++IACRQ   PRT  EI +V    T+KEIGR  + + K    +  + +       G 
Sbjct: 170 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTAQNLERINAVVSSGGV 228

Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                           D   RFC+ L++ +Q    +     +         RSP+SI AA
Sbjct: 229 PDPNDTYTATTSTKPSDLCNRFCNLLDLPYQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 288

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
            IY+ + L    K  K+IS    V++GTIR +YK LY    ++I P W    + D+KNL
Sbjct: 289 CIYMASYLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDMKNL 347

[193][TOP]
>UniRef100_A1CKG6 Transcription initiation protein n=1 Tax=Aspergillus clavatus
           RepID=A1CKG6_ASPCL
          Length = 350

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402
           A C++IACRQ   PRT  EI +V    T+KEIGR  + + K    +  + +       G 
Sbjct: 170 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTAQNLERINAVVSSGGV 228

Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                           D   RFC+ L++ +Q    +     +         RSP+SI AA
Sbjct: 229 PDPNDTYTATTSTKPSDLCNRFCNLLDLPYQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 288

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
            IY+ + L    K  K+IS    V++GTIR +YK LY    ++I P W    + D+KNL
Sbjct: 289 CIYMASYLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDMKNL 347

[194][TOP]
>UniRef100_C5A415 Transcription initiation factor TFIIB (Tfb) n=1 Tax=Thermococcus
           gammatolerans EJ3 RepID=C5A415_THEGJ
          Length = 303

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 48/148 (32%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +A LY ACR E  PRT+ EI  V+   TKKEIGR+  ++ + LGL    +  +      D
Sbjct: 162 SAALYAACRMEGIPRTLDEIARVSK-VTKKEIGRSYRFMARGLGLNLRPTSPI------D 214

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF   L ++ +  + A+E +++A +  I   + P  +AAA +Y+ + L  +KK  ++
Sbjct: 215 YVDRFGDALGVSSKTKQRAKEILQEAIKRGITSGKGPTGLAAAALYVASLLEGEKKTQRE 274

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           ++    V E T+RN YK+L   ++  +P
Sbjct: 275 VAEVAHVTEVTVRNRYKELVEKLNIKVP 302

[195][TOP]
>UniRef100_Q3SBA6 Archaeal transcriptional initiation factor TFB n=1 Tax=uncultured
           euryarchaeote Alv-FOS5 RepID=Q3SBA6_9EURY
          Length = 474

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y+ CRQ   PRT+ EI  V+ G TKKEIGR   ++ K+L       V++   +   
Sbjct: 332 AAVIYMICRQYGIPRTLDEISEVS-GITKKEIGRTYRFLKKEL------YVDVPLTNPIY 384

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L ++ +  + A+E + +A E  +   R P  +AAA +YI + +  +++  K+
Sbjct: 385 YVPRFASALGLSGKVQEKAKEILNEAVEKGLISGRGPTGVAAAAVYIASVMMGERRTQKE 444

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN Y++L
Sbjct: 445 VAEVAGVTEVTIRNRYREL 463

[196][TOP]
>UniRef100_B7R0Z5 Transcription initiation factor iib (Tfiib) n=1 Tax=Thermococcus
           sp. AM4 RepID=B7R0Z5_9EURY
          Length = 303

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 48/148 (32%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +A LY ACR E  PRT+ EI  V+   TKKEIGR+  ++ + LGL    +  +      D
Sbjct: 162 SAALYAACRMEGIPRTLDEIARVSK-VTKKEIGRSYRFMARGLGLNLRPTSPI------D 214

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF   L ++ +  + A+E +++A +  I   + P  +AAA +Y+ + L  +KK  ++
Sbjct: 215 YVDRFGDALGVSSKTKQRAKEILQEAIKRGITSGKGPTGLAAAALYVASLLEGEKKTQRE 274

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           ++    V E T+RN YK+L   ++  +P
Sbjct: 275 VAEVAHVTEVTVRNRYKELVEKLNIKVP 302

[197][TOP]
>UniRef100_B8N1Q4 Transcription initiation protein n=2 Tax=Aspergillus
           RepID=B8N1Q4_ASPFN
          Length = 350

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 60/179 (33%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
           A C++IACRQ   PRT  EI +V    ++KEIGR   A E       LE+  +V      
Sbjct: 170 AGCIFIACRQCKVPRTFTEIFAVTK-VSRKEIGRIYKALEKFFTAQNLERNNAVVSNGGV 228

Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                      +    D   RFC+ L++  Q    +     +         RSP+SI AA
Sbjct: 229 PDPNDTYTATTSTKPSDLCNRFCNLLDLPFQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 288

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
            IY+ + L    K  K+IS    V++GTIR +YK LY    ++I P W    + DLKNL
Sbjct: 289 CIYMASYLMGHGKTAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDLKNL 347

[198][TOP]
>UniRef100_A2QD90 Complex: TFIIB binds directly to TBP n=1 Tax=Aspergillus niger CBS
           513.88 RepID=A2QD90_ASPNC
          Length = 351

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 58/179 (32%), Positives = 82/179 (45%), Gaps = 21/179 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402
           A C++IACRQ   PRT  EI +V    T+KEIGR  + + K    +  + +       G 
Sbjct: 171 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTAQNLERINAVVSSGGV 229

Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                           D   RFC+ L++  Q    +     +         RSP+SI AA
Sbjct: 230 PDPNDTYTATTSTKPSDLCNRFCNLLDLPFQVTSVSSALSDRVTTMGDLAGRSPLSIVAA 289

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
            IY+ + L    K  K+IS    V++GTIR +YK LY    ++I P W    + DLKNL
Sbjct: 290 CIYMASYLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLIDPEWIKDGKGDLKNL 348

[199][TOP]
>UniRef100_Q5V5V1 Transcription initiation factor IIB n=1 Tax=Haloarcula marismortui
           RepID=Q5V5V1_HALMA
          Length = 319

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           ACLY ACRQE  PR+++E+  V+    +KEIGR   Y+ ++L L+      M  +    +
Sbjct: 182 ACLYAACRQEGIPRSLEEVSDVSR-VEQKEIGRTYRYVAQELELK------MEPVDPKQY 234

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RF S L ++ +    A E +    E  +   +SP   AAA IY  + L ++KK  +++
Sbjct: 235 VPRFASELELSEEVQSKANEIIDTTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 294

Query: 221 SIATGVAEGTIRNSYKD 171
           +    V E TIRN Y++
Sbjct: 295 ADVAQVTEVTIRNRYQE 311

[200][TOP]
>UniRef100_B9LS68 Transcription factor TFIIB cyclin-related n=1 Tax=Halorubrum
           lacusprofundi ATCC 49239 RepID=B9LS68_HALLT
          Length = 333

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A LY ACR+E  PR+++EI  V+    +KEIGR   YI ++LGLE      M  +    +
Sbjct: 195 AALYAACRKEGIPRSLEEISDVSR-VERKEIGRTYRYISQELGLE------MRPVDPKKY 247

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RF S L ++ +    A E ++   E  +   +SP   AAA IY  + L ++KK  +++
Sbjct: 248 VPRFSSELELSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 307

Query: 221 SIATGVAEGTIRNSYKD 171
           +    V E TIRN Y++
Sbjct: 308 ADVAQVTEVTIRNRYQE 324

[201][TOP]
>UniRef100_B9HEV3 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
           RepID=B9HEV3_POPTR
          Length = 278

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A L  A R+  +PRT++EI S+A    +KEIG+  + + + L L +  +    ++H    
Sbjct: 110 AALVQAIREAQEPRTLQEI-SIAANVPQKEIGKYIKILGEALQLSQPINSNSISVH---- 164

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEE------FDIRRSPISIAAAIIYIITQLSDDKKP 234
           M RFC+ L +N    K+AQE      E      F  RR+PISI+AA IY+  QL D +K 
Sbjct: 165 MPRFCTLLQLN----KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKT 220

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKIIPTWY 132
             +I   TG+ E T+R  YK+L  +   ++P  Y
Sbjct: 221 QAEICKVTGLTEVTLRKVYKELLENWGDLLPKNY 254

[202][TOP]
>UniRef100_B6AAS1 Transcription initiation factor IIB, putative n=1
           Tax=Cryptosporidium muris RN66 RepID=B6AAS1_9CRYT
          Length = 431

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 2/147 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A +YIACR+E   RTVKE+ +     +++E  RA   + K L   KG ++      A + 
Sbjct: 268 AIVYIACREEGVSRTVKELLTYDRSVSEREFVRAINKLKKDLP-RKGPTLSSS---AAEL 323

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRS--PISIAAAIIYIITQLSDDKKPLKDI 222
           M RFC  L ++H+ V  A+   + AE++ I +S  P S+AA  IY ++ L + +  +K +
Sbjct: 324 MPRFCHYLQLSHEIVGVAEYVCRTAEQY-INKSHRPNSLAAGAIYFVSNLCNIQIDMKSV 382

Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIP 141
           ++A    E T+R  Y++L    +K++P
Sbjct: 383 AVAAKSGETTVRGVYRELLLIGNKLLP 409

[203][TOP]
>UniRef100_C7YH08 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
           RepID=C7YH08_NECH7
          Length = 347

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 15/160 (9%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQ----------- 432
           A C++IACRQ + PRT +EI ++ +  +KKE+GR  + +   L   +GQ           
Sbjct: 170 AGCIFIACRQNNVPRTFREIFNLTS-VSKKEVGRVFKQLQSFLQKLQGQDGEATGLNAVT 228

Query: 431 SVEMGTIHAGDFMRRFCSNLNMNHQAV--KAAQEAVKKAEEFDIR--RSPISIAAAIIYI 264
           + E  ++ A D   R+ S L   +Q    K +++  ++A E      RSP+S+AAA IY+
Sbjct: 229 NYENTSVGAEDLCGRYVSQLGFKNQQKISKISRDLAEQANEISALAGRSPLSVAAACIYM 288

Query: 263 ITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII 144
              L  + +P   I+   GV++GT++ +YK L+    ++I
Sbjct: 289 ACHLVGEPRPSLPIAKQAGVSDGTVKTAYKHLFAAREQLI 328

[204][TOP]
>UniRef100_B6HCF2 Pc18g01520 protein n=1 Tax=Penicillium chrysogenum Wisconsin
           54-1255 RepID=B6HCF2_PENCW
          Length = 350

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 56/168 (33%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRA----KEYIVKQLGLEKGQSVEMGTI 411
           A C++IACRQ   PRT  EI +V    T+KEIGR     +++   Q       ++E G  
Sbjct: 170 AGCIFIACRQCKVPRTFTEIFAVTK-VTRKEIGRIYKALEKFFTTQNVERHNAALENGET 228

Query: 410 H--AGDF-----------MRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
           H  AGD+             RFC+ L++ +Q    +     +         RSP+SI AA
Sbjct: 229 HDFAGDYNATTSTKPSDLCNRFCNLLDLPYQVTSVSVSLSDRVTAMGDLAGRSPLSIVAA 288

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
            IY+ + L    K  K+IS    V++GTIR +YK LY    +++ P W
Sbjct: 289 CIYMASFLMGHGKSAKEISQVAHVSDGTIRGAYKQLYAERERLVDPEW 336

[205][TOP]
>UniRef100_Q18J17 Transcription initiation factor TFB n=1 Tax=Haloquadratum walsbyi
           DSM 16790 RepID=Q18J17_HALWD
          Length = 317

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           + LY ACRQE  PR++ E+  V+    +KEIGR   YI ++LGLE      +  +    F
Sbjct: 180 SALYAACRQEGIPRSLDEVAEVSR-VPQKEIGRTYRYISQELGLE------LRPVDPKQF 232

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RF S+L+++ +    A E +  + E  +   +SP   AAA IY  + L ++KK  +++
Sbjct: 233 VPRFSSSLHLSEEVQSKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREV 292

Query: 221 SIATGVAEGTIRNSYKD 171
           +    V E TIRN Y++
Sbjct: 293 ADVAQVTEVTIRNRYQE 309

[206][TOP]
>UniRef100_B9LNZ5 Transcription factor TFIIB cyclin-related n=1 Tax=Halorubrum
           lacusprofundi ATCC 49239 RepID=B9LNZ5_HALLT
          Length = 317

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A LY ACRQE  PR++ E+  V+    +KEIGR   YI ++LGLE      +  +    F
Sbjct: 180 AALYAACRQEGIPRSLDEVADVSR-VPQKEIGRTYRYISQELGLE------LKPVDPKQF 232

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RF S L ++ +    A E +  + E  +   +SP   AAA IY  + L ++KK  +++
Sbjct: 233 VPRFASALQLSEEVQSKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREV 292

Query: 221 SIATGVAEGTIRNSYKD 171
           +    V E TIRN Y++
Sbjct: 293 ADVAQVTEVTIRNRYQE 309

[207][TOP]
>UniRef100_Q9HJM2 Transcription initiation factor IIB 2 n=1 Tax=Thermoplasma
           acidophilum RepID=TF2B2_THEAC
          Length = 307

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A +Y ACR+ + PRT+ EI S A+   KK+IG+A  ++ K+L L    +          +
Sbjct: 167 ASIYAACRKVNIPRTLDEI-SKASEVNKKKIGKAYRHLAKELDLNLKPTTPFS------Y 219

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + +FC+ L+++ QA+  +++ V++A    I   + P  IAAA IYI +      +  K+I
Sbjct: 220 ISQFCNKLDLDKQAIVISEDIVRQAMSMGISSGKGPTGIAAAAIYIASVKVGKPRTQKEI 279

Query: 221 SIATGVAEGTIRNSYKDL 168
           +  +GV E TIRN YK++
Sbjct: 280 ARISGVTEVTIRNRYKEI 297

[208][TOP]
>UniRef100_P58109 Transcription initiation factor IIB 2 n=1 Tax=Thermococcus
           kodakarensis RepID=TF2B2_PYRKO
          Length = 306

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           +A LY ACR E  PRT+ EI SV+   +KKEIGR+  ++ + LGL    +  +      +
Sbjct: 165 SAALYAACRMEGIPRTLDEIASVSK-VSKKEIGRSYRFMARGLGLNLRPTSPI------E 217

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF   L ++ +  K A+E + +A +  I   + P  +AAA +YI   L  +KK  ++
Sbjct: 218 YVDRFGDALGVSARTKKRAKEILNEAIKRGITSGKGPTGLAAAALYIAALLEGEKKTQRE 277

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           ++    V E T+RN YK+L   +   +P
Sbjct: 278 VAEVAHVTEVTVRNRYKELVEKLGINVP 305

[209][TOP]
>UniRef100_Q979Q3 Transcription initiation factor IIB 1 n=1 Tax=Thermoplasma
           volcanium RepID=TF2B1_THEVO
          Length = 312

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           A  LY ACR  + PRT+ EI SV     KKEIGR    + + L L    S       A D
Sbjct: 171 AGALYAACRITNVPRTLGEIASVTR-VKKKEIGRTYRIMSRYLKLNIMPS------KAED 223

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS L ++      A E ++ AE   +   + P  +AAA IYI + ++ +++  + 
Sbjct: 224 YISRFCSKLKLSMDTRNKALEILRDAENVGLTSGKGPTGVAAAAIYIASLITGERRTQRA 283

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 284 VAEVAGVTEVTIRNRYKEL 302

[210][TOP]
>UniRef100_Q9HJM7 Transcription initiation factor IIB 1 n=1 Tax=Thermoplasma
           acidophilum RepID=TF2B1_THEAC
          Length = 312

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           A  LY ACR  + PRT+ EI SV     KKEIGR    + + L L    S       A D
Sbjct: 171 AGALYAACRITNVPRTLGEIASVTR-VKKKEIGRTYRIMSRYLKLNIMPS------KAED 223

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RFCS L ++      A E ++ AE   +   + P  +AAA IYI + ++ +++  + 
Sbjct: 224 YISRFCSKLKLSMDTRNKALEILRSAENAGLTSGKGPTGVAAAAIYIASLMTGERRTQRA 283

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++   GV E TIRN YK+L
Sbjct: 284 VAEVAGVTEVTIRNRYKEL 302

[211][TOP]
>UniRef100_Q59M46 Likely transcription factor TFIIB n=1 Tax=Candida albicans
           RepID=Q59M46_CANAL
          Length = 176

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 13/166 (7%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATK---KEIGRAKEYIVKQLGLEKG------QSV 426
           AA + + CR+ D  RT++EI ++ N ATK   K  G  K+ I   L  +        ++ 
Sbjct: 2   AATILLGCRRADVGRTLEEIRALTNVATKQIAKVTGLIKKIIRSHLNNDDASTSIVDETS 61

Query: 425 EMGTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQ- 255
            + T  A D +RRFCS+L ++     A++   +K  +  +   RSP +IAA  I++  + 
Sbjct: 62  SLTTHSAEDLIRRFCSHLGLSLAITSASEYVARKCHDLGVLAGRSPTTIAATSIFLAAKS 121

Query: 254 LSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAKEE 120
           L D K   + I   TGV+ GTI+NSYK L  +   +I P W A  +
Sbjct: 122 LGDTKLTQQQIRDKTGVSIGTIKNSYKILQENAKDLIDPAWEANSK 167

[212][TOP]
>UniRef100_C4JYZ7 Transcription initiation factor IIB n=1 Tax=Uncinocarpus reesii
           1704 RepID=C4JYZ7_UNCRE
          Length = 353

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAG- 402
           A C++IACRQ   PRT  EI ++    +KKEIGR  + + K    +  + +       G 
Sbjct: 173 AGCIFIACRQCKVPRTFTEIFALTR-VSKKEIGRIYKTLEKFFTAQNMERINSVVSSGGV 231

Query: 401 ----------------DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                           D   RFC+ L++  Q    +     +         RSP+SI AA
Sbjct: 232 PDPNETYTATTSTKPSDLCSRFCNLLDLPFQVTTVSSALADRVTSMGDLAGRSPLSIVAA 291

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTWYAK-EEDLKNL 105
            IY+ + L    K  K+IS    V++GTIR +YK LY    ++I P+W    + D+KNL
Sbjct: 292 SIYMASFLMGQGKSAKEISAVAHVSDGTIRGAYKQLYAERERLIHPSWIKDGKGDMKNL 350

[213][TOP]
>UniRef100_Q3ISF4 Transcription initiation factor TFB 1 n=1 Tax=Natronomonas
           pharaonis DSM 2160 RepID=Q3ISF4_NATPD
          Length = 322

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQL--GLEKGQSVEMGTIHAG 402
           A LY ACRQE  PR++ E+  VA    +KEIGR   YI ++L  GLE    V+       
Sbjct: 185 AALYAACRQEGIPRSLDEVADVAR-VEQKEIGRTYRYIAQELSLGLEPVDPVQ------- 236

Query: 401 DFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLK 228
            ++ RFCS L ++ +  +  +E ++   E  +   +SP   AAA IY  + L ++KK  +
Sbjct: 237 -YVPRFCSELGLSEEVEQKTREIIEVTAEKGMLSGKSPTGYAAAAIYAASLLCNEKKTQR 295

Query: 227 DISIATGVAEGTIRNSYKD 171
           +++    V E TIRN Y++
Sbjct: 296 EVAEVAQVTEVTIRNRYQE 314

[214][TOP]
>UniRef100_B6YWX5 Transcription initiation factor IIB n=1 Tax=Thermococcus onnurineus
           NA1 RepID=B6YWX5_THEON
          Length = 299

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AAC+Y ACR    PRT+ EI  ++    KKEIGR+  +I + L L   +     T    D
Sbjct: 156 AACVYAACRLLKVPRTLDEIADISR-VDKKEIGRSFRFIARNLNLTPKKLFVKPT----D 210

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ +F   L ++ +  + A   +++A E  +   +SP  + AA +YI   L D+K+  ++
Sbjct: 211 YVNKFADELGLSEKVRRRAIAILEEAYEKGLTSGKSPAGLVAAALYIAGLLEDEKRTQRE 270

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           ++    V E T+RN YK+L   ++  IP
Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLNLKIP 298

[215][TOP]
>UniRef100_C7NY62 Transcription factor TFIIB cyclin-related n=1 Tax=Halomicrobium
           mukohataei DSM 12286 RepID=C7NY62_HALMD
          Length = 324

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           + LY A RQ + PR++ E+  V+    + E+ R   YI+++LGLE      +       +
Sbjct: 186 SALYAAARQANNPRSLDEMTHVSR-VERMELTRTYRYIIRELGLE------VAPAKPESY 238

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RFCS L+++ +  + A+E ++ A +  I   +SP+ IAAA +Y    L+++K    ++
Sbjct: 239 VPRFCSELSLSDETERRARELIEAARDGGILSGKSPVGIAAAAVYAAALLTNEKVTQSEV 298

Query: 221 SIATGVAEGTIRNSYKDL 168
           S    ++E TIRN YK+L
Sbjct: 299 SGVADISEVTIRNRYKEL 316

[216][TOP]
>UniRef100_A8TD60 Transcription factor TFIIB cyclin-related n=1 Tax=Methanococcus
           voltae A3 RepID=A8TD60_METVO
          Length = 337

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACR+   PRT+ EI  V+    +KEIGR   +I ++L      ++ +   +  D
Sbjct: 196 AAALYAACRRCKVPRTLDEIAEVSR-VDRKEIGRTYRFISREL------NIRLAPTNPVD 248

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L +  +    A   +K A +  +   R P  +AAA IYI + L   ++  ++
Sbjct: 249 YVPRFASELKLPGEVESKAISILKDAGKKGLTSGRGPTGVAAAAIYIASVLQGTRRTQRE 308

Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
           ++   GV E TIRN YK+L  H+
Sbjct: 309 VADVAGVTEVTIRNRYKELTEHL 331

[217][TOP]
>UniRef100_Q9HSB3 Transcription initiation factor IIB 6 n=2 Tax=Halobacterium
           salinarum RepID=TF2B6_HALSA
          Length = 319

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           +C+Y A RQ   PR++ EI  V+    K EI R   Y+V++LGLE      +       +
Sbjct: 180 SCVYAAARQAGVPRSLDEIADVSR-VEKAEIARTYRYVVRELGLE------VAPADPESY 232

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RF S+L ++ +A   A+E +K A++  +   +SP+ +AAA +Y    L+++K     +
Sbjct: 233 VPRFASDLGLSDEASHRARELLKTAKDKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAKV 292

Query: 221 SIATGVAEGTIRNSYKDL 168
           S    ++E TIRN Y +L
Sbjct: 293 SEVADISEVTIRNRYHEL 310

[218][TOP]
>UniRef100_C7P8F9 Transcription factor TFIIB cyclin-related n=1
           Tax=Methanocaldococcus fervens AG86 RepID=C7P8F9_METFA
          Length = 331

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y ACR+   PRT+ EI   A+   +KEIGR   ++ ++LG      +++   +  D
Sbjct: 190 AAAIYAACRRCRVPRTLDEIAE-ASRVDRKEIGRTYRFLARELG------IKLTPTNPID 242

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L +  +    A + +++A E  +   R P  +AAA IYI + L   ++  ++
Sbjct: 243 YVPRFASELGLPGEVESKAIQILQQAAEKGLTSGRGPTGVAAAAIYIASVLLGCRRTQRE 302

Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
           ++   GV E TIRN YK+L  H+
Sbjct: 303 VAEVAGVTEVTIRNRYKELTEHL 325

[219][TOP]
>UniRef100_C1V5C9 Transcription initiation factor IIB (TFIIB) n=1 Tax=Halogeometricum
           borinquense DSM 11551 RepID=C1V5C9_9EURY
          Length = 327

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           + LY ACR+E  PR+++EI  V+    +KEIGR   YI ++LGLE      M  +    +
Sbjct: 189 SALYAACRKEGIPRSLEEISDVSR-VERKEIGRTYRYISQELGLE------MKPVDPKKY 241

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RF S L+++ +    A E ++   E  +   +SP   AAA IY  + L ++KK  +++
Sbjct: 242 VPRFSSELDLSKEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 301

Query: 221 SIATGVAEGTIRNSYKD 171
           +    V E TIRN Y++
Sbjct: 302 ADVAQVTEVTIRNRYQE 318

[220][TOP]
>UniRef100_Q979P7 Transcription initiation factor IIB 2 n=1 Tax=Thermoplasma
           volcanium RepID=TF2B2_THEVO
          Length = 313

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A +Y ACR+ + PRT+ EI   A+   KK+IG+A  ++ K+L L    +          +
Sbjct: 173 ASIYAACRKVNIPRTLDEIAK-ASEVNKKKIGKAYRHLAKELDLNLRPTTPFS------Y 225

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + +FC+ L+++ QA+  +++ V++A    I   + P  IAAA IYI +      +  K+I
Sbjct: 226 IAQFCNKLDLDKQAIVISEDIVRQAMSMGISSGKGPTGIAAAAIYIASVKVGKPRTQKEI 285

Query: 221 SIATGVAEGTIRNSYKDL 168
           +  +GV E TIRN YK++
Sbjct: 286 ARISGVTEVTIRNRYKEI 303

[221][TOP]
>UniRef100_Q3IN04 Transcription initiation factor TFB 6 n=1 Tax=Natronomonas
           pharaonis DSM 2160 RepID=Q3IN04_NATPD
          Length = 329

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A LY ACRQE  PR++ E+  VA    +KEIGR   Y+ ++LGLE      +      ++
Sbjct: 192 ATLYAACRQESIPRSLDEVAEVAR-VEQKEIGRTYRYLSQELGLE------IKPADPKEY 244

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RFCS L ++    +  +E +    E  +   +SP   AAA IY  + L ++KK  +++
Sbjct: 245 VPRFCSELALSEAVEQKTREIIDVTAEEGMLSGKSPTGYAAAAIYAASLLCNEKKTQREV 304

Query: 221 SIATGVAEGTIRNSYKD 171
           +    V E TIRN Y++
Sbjct: 305 AEVAQVTEVTIRNRYQE 321

[222][TOP]
>UniRef100_C7NZL7 Transcription factor TFIIB cyclin-related n=1 Tax=Halomicrobium
           mukohataei DSM 12286 RepID=C7NZL7_HALMD
          Length = 317

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           +CLY ACRQE  PR+++E+  V+    +KEIGR   Y+ ++L L+      M  +    +
Sbjct: 180 SCLYAACRQEGIPRSLEEVSDVSR-VEQKEIGRTYRYVAQELKLK------MEPVDPKQY 232

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RF S L ++ +    A E +    E  +   +SP   AAA IY  + L ++KK  +++
Sbjct: 233 VPRFASELELSEEVQSKANEIIDVTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREV 292

Query: 221 SIATGVAEGTIRNSYKD 171
           +    V E TIRN Y++
Sbjct: 293 ADVAQVTEVTIRNRYQE 309

[223][TOP]
>UniRef100_P50387 Transcription initiation factor IIB n=1 Tax=Sulfolobus shibatae
           RepID=TF2B_SULSH
          Length = 309

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y ACR+    RT+ EI      A +KE+ R    ++++L       V +      D
Sbjct: 167 AAAIYAACRRMKLARTLDEIAQYTK-ANRKEVARCYRLLLREL------DVSVPVSDPKD 219

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ R  + L ++ + +K A E + KA+   +   + P  +AAA IYI + L D+++  K+
Sbjct: 220 YVTRIANLLGLSGRVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKE 279

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
           I+   GV E T+RN YK+L   +   IPT
Sbjct: 280 IAQVAGVTEVTVRNRYKELTQELKISIPT 308

[224][TOP]
>UniRef100_Q9V0V5 Transcription initiation factor IIB n=1 Tax=Pyrococcus abyssi
           RepID=TF2B_PYRAB
          Length = 300

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AAC+Y ACR    PRT+ EI  +A    KKEIGR+  +I + L L   +     T    D
Sbjct: 156 AACVYAACRLLKVPRTLDEISDIAR-VEKKEIGRSYRFIARNLNLTPKKLFVKPT----D 210

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ +F   L ++ +  + A E +++A +  +   +SP  + AA +YI + L  +K+  ++
Sbjct: 211 YVNKFADELGLSEKVRRRAIEILEEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQRE 270

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           ++    V E T+RN YK+L   +   +P
Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLGIKVP 298

[225][TOP]
>UniRef100_Q9P9I7 Transcription initiation factor IIB n=1 Tax=Methanothermococcus
           thermolithotrophicus RepID=TF2B_METTL
          Length = 339

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACR+   PRT+ EI    +   +KEIGR   +I ++L      ++ +   +  D
Sbjct: 198 AAALYAACRRCKVPRTLDEIAE-GSRVDRKEIGRTYRFISREL------NIRLTPTNPID 250

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L +  +    A   ++KA E  +   R P  +AAA IYI + L   ++  ++
Sbjct: 251 YVPRFASELKLPGEVESKAISILQKANEKGLTSGRGPTGVAAAAIYIASVLHGTRRTQRE 310

Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
           ++   GV E TIRN YK+L  H+
Sbjct: 311 VADVAGVTEVTIRNRYKELTEHL 333

[226][TOP]
>UniRef100_A6UW60 Transcription initiation factor IIB n=1 Tax=Methanococcus aeolicus
           Nankai-3 RepID=TF2B_META3
          Length = 334

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY ACR+   PRT+ EI  ++    +KEIGR   +I ++L       + +      D
Sbjct: 193 AAALYAACRRCKVPRTLDEIAEMSR-VDRKEIGRTYRFISREL------KIRLAPTSPID 245

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L +  +    A   ++KA +  +   R P  +AAA IYI + L   +K  ++
Sbjct: 246 YVPRFASELKLPGEVESKAISILQKAGDKGLTSGRGPTGVAAAAIYIASVLHGTRKTQRE 305

Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
           ++   GV E TIRN YK+L  H+
Sbjct: 306 VADVAGVTEVTIRNRYKELTEHL 328

[227][TOP]
>UniRef100_C1V8T9 Transcription initiation factor IIB (TFIIB) n=1 Tax=Halogeometricum
           borinquense DSM 11551 RepID=C1V8T9_9EURY
          Length = 317

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           + LY ACRQE  PR++ E+  V+    +KEIGR   YI ++LGLE      +  +    F
Sbjct: 180 SALYAACRQEGIPRSLDEVAEVSR-VPQKEIGRTYRYISQELGLE------LKPVDPKQF 232

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RF S L ++ +    A E +  + E  +   +SP   AAA IY  + L ++KK  +++
Sbjct: 233 VPRFASALGLSEEVQAKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREV 292

Query: 221 SIATGVAEGTIRNSYKD 171
           +    V E TIRN Y++
Sbjct: 293 ADVAQVTEVTIRNRYQE 309

[228][TOP]
>UniRef100_O59151 Transcription initiation factor IIB n=1 Tax=Pyrococcus horikoshii
           RepID=TF2B_PYRHO
          Length = 300

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AAC+Y ACR    PRT+ EI  +A    KKEIGR+  +I + L L   +     T    D
Sbjct: 156 AACVYAACRLLKVPRTLDEISDIAR-VEKKEIGRSYRFIARNLNLTPKKLFVKPT----D 210

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ +F   L ++ +  + A E +++A    +   +SP  + AA +YI + L  +K+  ++
Sbjct: 211 YVNKFADELGLSEKVRRRAIEILEEAYRRGLTSGKSPAGLVAAALYIASLLEGEKRTQRE 270

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           ++    V E T+RN YK+L   +   +P
Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLGIKVP 298

[229][TOP]
>UniRef100_P61998 Transcription initiation factor IIB n=2 Tax=Pyrococcus
           RepID=TF2B_PYRFU
          Length = 300

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AAC+Y ACR    PRT+ EI  +A    KKEIGR+  +I + L L   +     T    D
Sbjct: 156 AACVYAACRLLKVPRTLDEIADIAR-VDKKEIGRSYRFIARNLNLTPKKLFVKPT----D 210

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ +F   L ++ +  + A E + +A +  +   +SP  + AA +YI + L  +K+  ++
Sbjct: 211 YVNKFADELGLSEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQRE 270

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           ++    V E T+RN YK+L   +   +P
Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLKIKVP 298

[230][TOP]
>UniRef100_Q5JGN1 Transcription initiation factor IIB 1 n=1 Tax=Thermococcus
           kodakarensis RepID=TF2B1_PYRKO
          Length = 300

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AAC+Y ACR    PRT+ EI  V+    KKEIGR+  +I + L L   +     T    D
Sbjct: 156 AACVYAACRLLKVPRTLDEIADVSR-VDKKEIGRSFRFIARHLNLTPKKLFVKPT----D 210

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ +F   L ++ +  + A E +++A +  +   +SP  + AA +YI + +  +K+  ++
Sbjct: 211 YVNKFADELGLSEKVRRRAIEILEEAYQRGLTSGKSPAGLVAAALYIASLMEGEKRTQRE 270

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           ++    V E T+RN YK+L   ++  +P
Sbjct: 271 VAEVARVTEVTVRNRYKELVEKLNLKVP 298

[231][TOP]
>UniRef100_UPI00003C83D7 transcription initiation factor IIB n=1 Tax=Ferroplasma acidarmanus
           fer1 RepID=UPI00003C83D7
          Length = 305

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A +Y +CR  + PRT+ EI  V+    KK+IG+A  ++ K+L L    +          +
Sbjct: 165 ASIYASCRMINIPRTLDEISKVSE-VNKKKIGKAYRHLAKELALNLQPTTPYS------Y 217

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + +FC+ L+++ Q +  ++  ++ A E  +   + P  IAAA IYI    +  ++  KD+
Sbjct: 218 VSQFCNKLDLDKQVIMDSEHIIRLAGESGLSTGKGPTGIAAAAIYIAAMKNGKQRTQKDV 277

Query: 221 SIATGVAEGTIRNSYKDL 168
           +  +GV E TIRN YK++
Sbjct: 278 ARVSGVTEVTIRNRYKEI 295

[232][TOP]
>UniRef100_Q98S45 Transcription initiation factor IIB n=1 Tax=Guillardia theta
           RepID=Q98S45_GUITH
          Length = 325

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 5/150 (3%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA ++I C+ E  PR+ KEI  +     KK+IG     + K L     + +++      D
Sbjct: 160 AASIFIICKNESIPRSFKEISELTK-VKKKDIGNRVRIMEKAL-----EGIKISKKRDSD 213

Query: 398 -FMRRFCSNLNMNHQAVKAAQEAVK--KAEEFDIRRSPISIAAAIIYIITQLSD--DKKP 234
            F+ RFCS L ++  + K A++     K +E    R+ IS+AAA IY+++Q+ +  +   
Sbjct: 214 NFISRFCSKLGLSSTSSKIAEQIANFIKDKEGMYGRNYISVAAASIYVVSQIPNLSNNCN 273

Query: 233 LKDISIATGVAEGTIRNSYKDLYPHVSKII 144
           LK I  ATGV+E T+R++YK +YP+  +I+
Sbjct: 274 LKKIIEATGVSEITLRSAYKAMYPYRKEIL 303

[233][TOP]
>UniRef100_C3MQW9 Transcription factor TFIIB cyclin-related n=5 Tax=Sulfolobus
           islandicus RepID=C3MQW9_SULIL
          Length = 309

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y ACR+    RT+ EI      A +KE+ R    ++++L       V +      D
Sbjct: 167 AAAIYAACRRMKLARTLDEIAQYTK-ANRKEVARCYRLLLREL------DVSVPVSDPKD 219

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ R  + L ++   +K A E + KA+   +   + P  +AAA IYI + L D+++  K+
Sbjct: 220 YVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKE 279

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
           I+   GV E T+RN YK+L   +   IPT
Sbjct: 280 IAQVAGVTEVTVRNRYKELTQELKISIPT 308

[234][TOP]
>UniRef100_B8D3B4 Transcription initiation factor IIB (TFIIB) n=1 Tax=Desulfurococcus
           kamchatkensis 1221n RepID=B8D3B4_DESK1
          Length = 319

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y+ACR+   PR++ EI        +KEI R    ++++L       +++ T    D
Sbjct: 179 AATIYLACREMKVPRSLDEITRHTR-VNRKEIARCYRLLLREL------HIKVTTTDPVD 231

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ R    L +  QAVK A E + KA+E  +   + P  +AAA +YI  +   +K+  K+
Sbjct: 232 YVPRIVHGLGLPGQAVKIAIEIINKAKEQGVTGGKDPAGLAAAAVYIAAEQLGEKRTQKE 291

Query: 224 ISIATGVAEGTIRNSYKDL 168
           I+   GV E T+RN YK+L
Sbjct: 292 IAHVAGVTEVTVRNRYKEL 310

[235][TOP]
>UniRef100_Q9UWN6 Transcription initiation factor IIB n=1 Tax=Sulfolobus
           acidocaldarius RepID=TF2B_SULAC
          Length = 307

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y ACR+    RT+ EI      A +KE+ R    I+++L       +E+      D
Sbjct: 165 AASIYAACRRMKMARTLDEIAQFTK-ANRKEVARCYRLILREL------DIEVPVSDPKD 217

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ R  + L+++   +K A E ++KA+   +   + P  +AAA IYI   L+D+++  K+
Sbjct: 218 YVTRIGTLLSLSGITMKHAAEIIEKAKNSGLTAGKDPAGLAAAAIYIAALLNDERRTQKE 277

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
           I+   GV E T+RN YK+L   +   IP+
Sbjct: 278 IAQVAGVTEVTVRNRYKELTQELKIQIPS 306

[236][TOP]
>UniRef100_P58111 Transcription initiation factor IIB 1 n=2 Tax=Sulfolobus
           solfataricus RepID=TF2B1_SULSO
          Length = 309

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y ACR+    RT+ EI      A +KE+ R    ++++L       V +      D
Sbjct: 167 AAAIYAACRRMKLARTLDEIAQYTK-ANRKEVARCYRLLLREL------DVSVPVSDPKD 219

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ R  + L ++   +K A E + KA+   +   + P  +AAA IYI + L D+++  K+
Sbjct: 220 YVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKE 279

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
           I+   GV E T+RN YK+L   +   IPT
Sbjct: 280 IAQVAGVTEVTVRNRYKELTQELKISIPT 308

[237][TOP]
>UniRef100_Q5CWC3 Transcription initiation factor TFIIB Sua7p; ZnR+2cyclins n=1
           Tax=Cryptosporidium parvum Iowa II RepID=Q5CWC3_CRYPV
          Length = 456

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 47/148 (31%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A +Y+ACR+E   RTVKE+ S     +++E+ R+   + K L   +G ++      A + 
Sbjct: 293 AIVYLACREEGVSRTVKELLSFDRTISERELVRSINKLKKDLP-RRGPTLSSS---AAEL 348

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIRRS--PISIAAAIIYIITQLSDDKKPLKDI 222
           M RFC  L ++H+ V  A+   + AE++ I +S  P S+AA  IY +  L + +  +K +
Sbjct: 349 MPRFCHYLQLSHEIVGIAEYVCRTAEQY-INKSHRPNSLAAGAIYFVCNLCNIQIEMKSV 407

Query: 221 SIATGVAEGTIRNSYKDLYPHVSKIIPT 138
           ++A    E T+R  YK+L     K++P+
Sbjct: 408 AVAAKSGETTVRGVYKELLLVGEKLLPS 435

[238][TOP]
>UniRef100_B9ZB69 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii
           ATCC 43099 RepID=B9ZB69_NATMA
          Length = 326

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           AC+Y A RQ   PR++ EI  V+    K EI R   Y+V++LGLE      +       +
Sbjct: 186 ACVYAAARQAGVPRSLDEIADVSR-VEKNEIARTYRYVVRELGLE------VQPADPESY 238

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RF S L+++ +A   A+  ++ A+E  +   +SP+ +AAA +Y    L+++K     +
Sbjct: 239 VPRFASGLDLSDEAEHRARALLQNAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAV 298

Query: 221 SIATGVAEGTIRNSYKDL 168
           S    ++E TIRN Y +L
Sbjct: 299 SDVADISEVTIRNRYHEL 316

[239][TOP]
>UniRef100_Q975S1 Transcription initiation factor IIB n=1 Tax=Sulfolobus tokodaii
           RepID=TF2B_SULTO
          Length = 308

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y ACR+    RT+ EI      A +KE+ R    I+++L       + +      D
Sbjct: 166 AASIYAACRRMKMARTLDEIAQFTK-ANRKEVARCYRLILREL------DINVPVSDPKD 218

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ R  S L ++   +K A + ++KA+E  +   + P  +AAA IYI   L+D+++  K+
Sbjct: 219 YVTRIGSLLGLSGSTMKMAIDIIEKAKESGLTAGKDPAGLAAAAIYIAALLNDERRTQKE 278

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
           I+   GV E T+RN YK+L   +   IP
Sbjct: 279 IAQIAGVTEVTVRNRYKELTQELKIQIP 306

[240][TOP]
>UniRef100_C5FDC5 Transcription initiation factor IIB n=1 Tax=Microsporum canis CBS
           113480 RepID=C5FDC5_NANOT
          Length = 352

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 57/168 (33%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGR---AKEYIVKQLGLEKGQSVEMG--- 417
           A C++IACRQ   PRT  EI +V    +KKEIGR   A E       LE+  SV      
Sbjct: 172 AGCIFIACRQCKVPRTFTEIFAVTR-VSKKEIGRIYKALEKFFTAQNLERINSVVSNGGV 230

Query: 416 -----------TIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFD--IRRSPISIAAA 276
                      +    D   RFC+ L++  Q    +     +         RSP+SI AA
Sbjct: 231 PDPNDAYTGTTSTKPSDLCNRFCNLLDLPFQVTNVSSMLADRVTSMGDLAGRSPLSIVAA 290

Query: 275 IIYIITQLSDDKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
            IY+ + L    K  K+IS    V++GTIR +YK LY    ++I P W
Sbjct: 291 SIYMASFLMGHGKTAKEISGVAHVSDGTIRGAYKQLYAERERLIDPAW 338

[241][TOP]
>UniRef100_A5DBP0 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
           RepID=A5DBP0_PICGU
          Length = 339

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 50/160 (31%), Positives = 91/160 (56%), Gaps = 12/160 (7%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEM------- 420
           AA + + CR+ +  R+  EI ++ N   KKE+GR  + +++ L  +   + ++       
Sbjct: 173 AASICLGCRKANVGRSFLEIAALTN-VPKKELGRVFKTMIQLLQEKHSNNPDVMHMTQQP 231

Query: 419 -GTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLS 249
             +  A D +RRFCS+L ++ Q   AA+   ++ ++  I   RSPI++AA +IY+ + + 
Sbjct: 232 VSSTSAEDLIRRFCSHLGLSTQISNAAEYIARRCKDEQILSGRSPITVAATVIYMASLIF 291

Query: 248 D-DKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
           + D  P + I+   GV++GTI+ SYK L+    KI+ P+W
Sbjct: 292 NVDVSPAR-IADKAGVSDGTIKTSYKVLFEEKDKILDPSW 330

[242][TOP]
>UniRef100_Q3IRP2 Transcription initiation factor TFB 2 n=1 Tax=Natronomonas
           pharaonis DSM 2160 RepID=Q3IRP2_NATPD
          Length = 322

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 43/138 (31%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A LY A +Q   PR++ E+  V+    K EI R   Y+V++LGLE      +       +
Sbjct: 182 ASLYAAAKQARTPRSLDEVAKVSR-VEKSEIARTYRYVVRELGLE------IQPADPKSY 234

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDI--RRSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RF S++ ++ +A + A++ +  A+E  +   +SP+ +AAA +Y  + L ++K   K++
Sbjct: 235 VPRFASDIELSDEAERRARQLLDNAQEAGVVSGKSPVGLAAAAVYAASLLCNEKVTQKEV 294

Query: 221 SIATGVAEGTIRNSYKDL 168
           S    ++E TIRN Y +L
Sbjct: 295 SEVADISEVTIRNRYHEL 312

[243][TOP]
>UniRef100_C9REA0 Transcription factor TFIIB cyclin-releated protein n=1
           Tax=Methanocaldococcus vulcanius M7 RepID=C9REA0_9EURY
          Length = 666

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y ACR+   PRT+ EI   A+   +KEIGR   ++ ++L      ++++   +  D
Sbjct: 525 AAAIYAACRRCRVPRTLDEIAE-ASRVDRKEIGRTYRFLAREL------NIKLTPTNPID 577

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L +  +    A + +++A E  +   R P  +AAA IYI + L   ++  ++
Sbjct: 578 YVPRFASELGLPGEVESKAIQILQQATEKGLTSGRGPTGVAAAAIYIASVLLGCRRTQRE 637

Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
           ++   GV E TIRN YK+L  H+
Sbjct: 638 VAEVAGVTEVTIRNRYKELTEHL 660

[244][TOP]
>UniRef100_B9ZI51 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii
           ATCC 43099 RepID=B9ZI51_NATMA
          Length = 321

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
 Frame = -1

Query: 569 LYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMR 390
           LY ACR E  PR++ EI +V+    + EIGR   YI K+LGLE      M  +    ++ 
Sbjct: 185 LYAACRMEGIPRSLDEIAAVSR-VERMEIGRTYRYISKELGLE------MQPVDPKKYVP 237

Query: 389 RFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDISI 216
           RFCS L +  +    A E +    E  +   +SP   AAA IY    L + KK  ++++ 
Sbjct: 238 RFCSELELPDEVQSKANEIIDTTAEKGMLSGKSPTGYAAAAIYAAALLCNKKKTQREVAD 297

Query: 215 ATGVAEGTIRNSYKD 171
              V E TIRN Y++
Sbjct: 298 VAQVTEVTIRNRYQE 312

[245][TOP]
>UniRef100_B9ZFI9 Transcription factor TFIIB cyclin-related n=1 Tax=Natrialba magadii
           ATCC 43099 RepID=B9ZFI9_NATMA
          Length = 349

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
 Frame = -1

Query: 575 ACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDF 396
           A LY + RQ   PR++ EI  V+    K EI R   Y++++LGLE   +  +       +
Sbjct: 210 ASLYASARQAGTPRSLDEIAGVSR-VEKDEIARTYRYVIRELGLEVQPADPVS------Y 262

Query: 395 MRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKDI 222
           + RF S+L+++ +  + A++ ++ A+E  I   +SP+ +AAA +Y    L+++K    D+
Sbjct: 263 VPRFASDLDLSDETERRARQLLETAKESGIHSGKSPVGLAAAAVYAGALLTNEKVTQNDV 322

Query: 221 SIATGVAEGTIRNSYKDL 168
           S    ++E TIRN Y +L
Sbjct: 323 SEVASISEVTIRNRYHEL 340

[246][TOP]
>UniRef100_B5IT42 TFIIB zinc-binding family n=1 Tax=Thermococcus barophilus MP
           RepID=B5IT42_9EURY
          Length = 299

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AAC+Y ACR    PRT+ EI  +A    KKEIGR+  +I + L L   +     T    D
Sbjct: 156 AACVYAACRLLKIPRTLDEIADIAR-VDKKEIGRSFRFIARNLNLTPKKLFVKPT----D 210

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ +F   L ++ +  + A E +++A    +   +SP  + AA +YI + L  +K+  ++
Sbjct: 211 YVNKFADELGLSEKVRRRAIELLEEAYNRGLTSGKSPAGLVAAALYIASLLEGEKRTQRE 270

Query: 224 ISIATGVAEGTIRNSYKDL 168
           ++    V E T+RN YK+L
Sbjct: 271 VAEVARVTEVTVRNRYKEL 289

[247][TOP]
>UniRef100_Q58192 Endonuclease Mja Tfb n=1 Tax=Methanocaldococcus jannaschii
           RepID=TF2B_METJA
          Length = 673

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y ACR+   PRT+ EI   A+   +KEIGR   ++ ++L      ++++   +  D
Sbjct: 532 AAAIYAACRRCRVPRTLDEIAE-ASRVDRKEIGRTYRFLAREL------NIKLTPTNPID 584

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ RF S L +  +    A + +++A E  +   R P  +AAA IYI + L   ++  ++
Sbjct: 585 YVPRFASELGLPGEVESKAIQILQQAAEKGLTSGRGPTGVAAAAIYIASVLLGCRRTQRE 644

Query: 224 ISIATGVAEGTIRNSYKDLYPHV 156
           ++   GV E TIRN YK+L  H+
Sbjct: 645 VAEVAGVTEVTIRNRYKELTEHL 667

[248][TOP]
>UniRef100_C3NGJ8 Transcription factor TFIIB cyclin-related n=1 Tax=Sulfolobus
           islandicus Y.N.15.51 RepID=C3NGJ8_SULIN
          Length = 309

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA +Y ACR+    RT+ EI      A +KE+ R    ++++L       V +      D
Sbjct: 167 AAAIYAACRRMKLARTLDEIAQYTK-ANRKEVARCYRLLLREL------DVSVPVSDPKD 219

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ R  + L ++   +K A E + KA+   +   + P  +AAA IYI + L D+++  K+
Sbjct: 220 YVTRIANLLGLSGAVMKTAAEIIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKE 279

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIPT 138
           I+   GV E T+RN YK++   +   IPT
Sbjct: 280 IAQVAGVTEVTVRNRYKEVTQELKISIPT 308

[249][TOP]
>UniRef100_A1RV37 Transcription initiation factor IIB n=1 Tax=Pyrobaculum islandicum
           DSM 4184 RepID=TF2B_PYRIL
          Length = 333

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGD 399
           AA LY+ACR    PR + E+      A+++E+ R    ++++L      +V++       
Sbjct: 191 AAALYMACRMMKMPRPLDELVRYTK-ASRREVARCYRLLLREL------NVKVPISDPVL 243

Query: 398 FMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLSDDKKPLKD 225
           ++ R    L ++ + VK A E ++KA++  I   + P  +AAA +YI + L  D +  KD
Sbjct: 244 YISRIAEQLKLSGEVVKTAIEILQKAKKAGITAGKDPAGLAAAAVYIASLLHGDNRTQKD 303

Query: 224 ISIATGVAEGTIRNSYKDLYPHVSKIIP 141
            ++A GV E T+RN YK+L   ++  +P
Sbjct: 304 FAVAAGVTEVTVRNRYKELAKTLNIKVP 331

[250][TOP]
>UniRef100_UPI000151A977 hypothetical protein PGUG_00695 n=1 Tax=Pichia guilliermondii ATCC
           6260 RepID=UPI000151A977
          Length = 339

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 50/160 (31%), Positives = 90/160 (56%), Gaps = 12/160 (7%)
 Frame = -1

Query: 578 AACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEM------- 420
           AA + + CR+ +  R+  EI ++ N   KKE+GR  + +++ L  +   + ++       
Sbjct: 173 AASICLGCRKANVGRSFLEIAALTN-VPKKELGRVFKTMIQLLQEKHSNNPDVMHMTQQP 231

Query: 419 -GTIHAGDFMRRFCSNLNMNHQAVKAAQEAVKKAEEFDIR--RSPISIAAAIIYIITQLS 249
             +  A D +RRFCS+L ++ Q   AA+   ++ ++  I   RSPI++AA +IY+ + + 
Sbjct: 232 VSSTSAEDLIRRFCSHLGLSTQISNAAEYIARRCKDEQILSGRSPITVAATVIYMASLIF 291

Query: 248 D-DKKPLKDISIATGVAEGTIRNSYKDLYPHVSKII-PTW 135
           + D  P + I+   GV++GTI+ SYK L+    KI+ P W
Sbjct: 292 NVDVSPAR-IADKAGVSDGTIKTSYKVLFEEKDKILDPLW 330