BB914817 ( RCE14427 )

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[1][TOP]
>UniRef100_UPI000034ED40 RNA-dependent RNA polymerase family protein n=1 Tax=Arabidopsis
            thaliana RepID=UPI000034ED40
          Length = 992

 Score =  160 bits (405), Expect = 7e-38
 Identities = 90/195 (46%), Positives = 127/195 (65%), Gaps = 4/195 (2%)
 Frame = +2

Query: 8    KSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRD--NSFTSTSILGSIFDE 181
            K NILKLID+YY+ALDAPKKG  K+ +P DL ++ +PHYM+RD    F STSILG IFD 
Sbjct: 788  KKNILKLIDIYYDALDAPKKGA-KVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFDT 846

Query: 182  VCRWQITDVSGIEIRKLPCFDVE-IPDDYKHKWSSLYIQYRQDMSTAL-NGKRPNSNEEA 355
            V      +    EI KL  F+ E +P  +  K++S Y  YR +MS A+    +   N+  
Sbjct: 847  VDSHNAEEPPPSEISKLWYFEDEPVPKSHMDKFTSWYENYRSEMSQAMMETDKVKRNQLT 906

Query: 356  NEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGS 535
            NEVI+ YK+ F  A    D +KS+ ++Y +ALA+Y+V+YDYA +++ VA+C FAW VAG 
Sbjct: 907  NEVIQRYKQDFYGAAGFEDSNKSLEELYPQALALYNVVYDYA-IQEGVAKCTFAWNVAGP 965

Query: 536  VLVRYYAEKQYQKTL 580
            VL ++Y +K   K++
Sbjct: 966  VLCKFYLKKTKDKSV 980

[2][TOP]
>UniRef100_O82190 Putative uncharacterized protein At2g19910 n=1 Tax=Arabidopsis
            thaliana RepID=O82190_ARATH
          Length = 966

 Score =  160 bits (405), Expect = 7e-38
 Identities = 90/195 (46%), Positives = 127/195 (65%), Gaps = 4/195 (2%)
 Frame = +2

Query: 8    KSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRD--NSFTSTSILGSIFDE 181
            K NILKLID+YY+ALDAPKKG  K+ +P DL ++ +PHYM+RD    F STSILG IFD 
Sbjct: 762  KKNILKLIDIYYDALDAPKKGA-KVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFDT 820

Query: 182  VCRWQITDVSGIEIRKLPCFDVE-IPDDYKHKWSSLYIQYRQDMSTAL-NGKRPNSNEEA 355
            V      +    EI KL  F+ E +P  +  K++S Y  YR +MS A+    +   N+  
Sbjct: 821  VDSHNAEEPPPSEISKLWYFEDEPVPKSHMDKFTSWYENYRSEMSQAMMETDKVKRNQLT 880

Query: 356  NEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGS 535
            NEVI+ YK+ F  A    D +KS+ ++Y +ALA+Y+V+YDYA +++ VA+C FAW VAG 
Sbjct: 881  NEVIQRYKQDFYGAAGFEDSNKSLEELYPQALALYNVVYDYA-IQEGVAKCTFAWNVAGP 939

Query: 536  VLVRYYAEKQYQKTL 580
            VL ++Y +K   K++
Sbjct: 940  VLCKFYLKKTKDKSV 954

[3][TOP]
>UniRef100_UPI000034ED42 RNA-dependent RNA polymerase family protein n=1 Tax=Arabidopsis
            thaliana RepID=UPI000034ED42
          Length = 977

 Score =  156 bits (394), Expect = 1e-36
 Identities = 86/193 (44%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
 Frame = +2

Query: 2    QVKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDE 181
            ++K  +L+LID+YY+ALDAPKKG  K+ +P  L  +++PHYM+RD  F STSILG IFD 
Sbjct: 775  EMKKKMLELIDIYYDALDAPKKGD-KVYLPNKLKPDIFPHYMERDKKFQSTSILGLIFDF 833

Query: 182  VCRWQITDVS-GIEIRKLPCFDVE-IPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEA 355
            V      + S   EI KLPCF+ E + + +  K    Y  YR +M+ A+   + + +E A
Sbjct: 834  VKSQTTEEPSPSSEISKLPCFEDEPVSEFHMQKCRLWYDNYRTEMTQAM---KTDKDESA 890

Query: 356  NEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGS 535
            NEVI+ YK+ F  A    D  KS+ ++Y +ALA+Y ++YDYA +   V++C F WKVAG 
Sbjct: 891  NEVIQRYKQEFYGAAGFEDSKKSLEELYPQALALYKIVYDYA-IHAGVSKCRFVWKVAGP 949

Query: 536  VLVRYYAEKQYQK 574
            VL R+Y  K+ Q+
Sbjct: 950  VLCRFYLNKKMQE 962

[4][TOP]
>UniRef100_Q0WNQ6 Putative uncharacterized protein At2g19930 (Fragment) n=1
           Tax=Arabidopsis thaliana RepID=Q0WNQ6_ARATH
          Length = 339

 Score =  156 bits (394), Expect = 1e-36
 Identities = 86/193 (44%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
 Frame = +2

Query: 2   QVKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDE 181
           ++K  +L+LID+YY+ALDAPKKG  K+ +P  L  +++PHYM+RD  F STSILG IFD 
Sbjct: 137 EMKKKMLELIDIYYDALDAPKKGD-KVYLPNKLKPDIFPHYMERDKKFQSTSILGLIFDF 195

Query: 182 VCRWQITDVS-GIEIRKLPCFDVE-IPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEA 355
           V      + S   EI KLPCF+ E + + +  K    Y  YR +M+ A+   + + +E A
Sbjct: 196 VKSQTTEEPSPSSEISKLPCFEDEPVSEFHMQKCRLWYDNYRTEMTQAM---KTDKDESA 252

Query: 356 NEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGS 535
           NEVI+ YK+ F  A    D  KS+ ++Y +ALA+Y ++YDYA +   V++C F WKVAG 
Sbjct: 253 NEVIQRYKQEFYGAAGFEDSKKSLEELYPQALALYKIVYDYA-IHAGVSKCRFVWKVAGP 311

Query: 536 VLVRYYAEKQYQK 574
           VL R+Y  K+ Q+
Sbjct: 312 VLCRFYLNKKMQE 324

[5][TOP]
>UniRef100_C5XLU8 Putative uncharacterized protein Sb03g002800 n=1 Tax=Sorghum bicolor
            RepID=C5XLU8_SORBI
          Length = 1127

 Score =  153 bits (387), Expect = 8e-36
 Identities = 83/191 (43%), Positives = 117/191 (61%), Gaps = 4/191 (2%)
 Frame = +2

Query: 5    VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDN--SFTSTSILGSIFD 178
            +K  +L L+D+YY ALDAPK+G  KI VP +L V+ YPH+M+RD   S+TSTS+LG I+D
Sbjct: 917  IKKKMLDLVDIYYLALDAPKEGN-KITVPGELKVKKYPHFMERDEKKSYTSTSVLGKIYD 975

Query: 179  EVCRWQITDVSGIEIRKLPCF-DVEIPDDYKHKWSSLYIQY-RQDMSTALNGKRPNSNEE 352
            EV   +      I+I  L CF +V++ +DYK +W SLY QY R+         +   N  
Sbjct: 976  EVMLKESEIDPEIKIVPLSCFTEVKVSEDYKGRWRSLYYQYLRESTDLCKLEDKAEKNNN 1035

Query: 353  ANEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAG 532
              ++ + YK+   +A       +   D+ NEA AVY V+Y+YAM + D+A+CGFAWKVAG
Sbjct: 1036 YRQLYQEYKRKLYEAEEFEQSPREQLDLLNEACAVYQVVYEYAMSRNDIAKCGFAWKVAG 1095

Query: 533  SVLVRYYAEKQ 565
              L R Y  K+
Sbjct: 1096 RALCRLYTLKR 1106

[6][TOP]
>UniRef100_UPI00019842AC PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
            RepID=UPI00019842AC
          Length = 943

 Score =  148 bits (374), Expect = 3e-34
 Identities = 78/193 (40%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
 Frame = +2

Query: 5    VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDEV 184
            +K  +L+L D+YY+ALDAPK G  K+ V K+L  E +PH+M R++S+ STSILG I+D V
Sbjct: 740  LKRKMLELTDIYYDALDAPKSGM-KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAV 798

Query: 185  CRWQITDVSGIEIRKLPCFDVE-IPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEANE 361
              +Q  + S  EI +LP F+++ +P      W   Y QYR +M+ AL       +E A E
Sbjct: 799  ESFQPENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAE 858

Query: 362  VIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGSVL 541
            VI  YK+I   A    +  +++ DI++EALA+YHV Y++ +    V+ C F W+VAG  L
Sbjct: 859  VINKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRAL 918

Query: 542  VRYYAEKQYQKTL 580
             + Y  K  +K++
Sbjct: 919  CKLYTVKLGEKSM 931

[7][TOP]
>UniRef100_A7PEI0 Chromosome chr11 scaffold_13, whole genome shotgun sequence n=1
            Tax=Vitis vinifera RepID=A7PEI0_VITVI
          Length = 788

 Score =  148 bits (374), Expect = 3e-34
 Identities = 78/193 (40%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
 Frame = +2

Query: 5    VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDEV 184
            +K  +L+L D+YY+ALDAPK G  K+ V K+L  E +PH+M R++S+ STSILG I+D V
Sbjct: 585  LKRKMLELTDIYYDALDAPKSGM-KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAV 643

Query: 185  CRWQITDVSGIEIRKLPCFDVE-IPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEANE 361
              +Q  + S  EI +LP F+++ +P      W   Y QYR +M+ AL       +E A E
Sbjct: 644  ESFQPENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAE 703

Query: 362  VIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGSVL 541
            VI  YK+I   A    +  +++ DI++EALA+YHV Y++ +    V+ C F W+VAG  L
Sbjct: 704  VINKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRAL 763

Query: 542  VRYYAEKQYQKTL 580
             + Y  K  +K++
Sbjct: 764  CKLYTVKLGEKSM 776

[8][TOP]
>UniRef100_O82188 Putative uncharacterized protein At2g19930 n=1 Tax=Arabidopsis
            thaliana RepID=O82188_ARATH
          Length = 929

 Score =  147 bits (370), Expect = 8e-34
 Identities = 88/226 (38%), Positives = 128/226 (56%), Gaps = 35/226 (15%)
 Frame = +2

Query: 2    QVKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDE 181
            ++K  +L+LID+YY+ALDAPKKG  K+ +P  L  +++PHYM+RD  F STSILG IFD 
Sbjct: 695  EMKKKMLELIDIYYDALDAPKKGD-KVYLPNKLKPDIFPHYMERDKKFQSTSILGLIFDF 753

Query: 182  VCRWQITD----------------------------------VSGIEIRKLPCFDVE-IP 256
            V + Q T+                                  V  +EI KLPCF+ E + 
Sbjct: 754  V-KSQTTEEPSPSSGKGPLLVLLYTYNQITKEIINHDMCFTVVYNLEISKLPCFEDEPVS 812

Query: 257  DDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEANEVIKLYKKIFNDAINIVDGSKSITDI 436
            + +  K    Y  YR +M+ A+   + + +E ANEVI+ YK+ F  A    D  KS+ ++
Sbjct: 813  EFHMQKCRLWYDNYRTEMTQAM---KTDKDESANEVIQRYKQEFYGAAGFEDSKKSLEEL 869

Query: 437  YNEALAVYHVIYDYAMVKKDVARCGFAWKVAGSVLVRYYAEKQYQK 574
            Y +ALA+Y ++YDYA +   V++C F WKVAG VL R+Y  K+ Q+
Sbjct: 870  YPQALALYKIVYDYA-IHAGVSKCRFVWKVAGPVLCRFYLNKKMQE 914

[9][TOP]
>UniRef100_B9P554 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=B9P554_POPTR
          Length = 211

 Score =  142 bits (357), Expect = 2e-32
 Identities = 80/192 (41%), Positives = 114/192 (59%), Gaps = 2/192 (1%)
 Frame = +2

Query: 5   VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDN--SFTSTSILGSIFD 178
           VK NI  LID+YY+ALDAPKKGG KI+VP+ L  E++PH+M++    ++ STSILG I+D
Sbjct: 18  VKKNINLLIDIYYDALDAPKKGGRKIEVPEALKAELFPHFMEKHEKKTYRSTSILGKIYD 77

Query: 179 EVCRWQITDVSGIEIRKLPCFDVEIPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEAN 358
           +V  ++  D+S             + +    KW  LY QYR +M  AL   +  +NE AN
Sbjct: 78  KVKAYEDMDLSS-----------NVHESCLVKWKGLYGQYRTEMRNALQAGKEKNNE-AN 125

Query: 359 EVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGSV 538
           EVIK YK+I  +A       +   +I+ EA A+Y V Y++A  +  V +CGFAW+VAG  
Sbjct: 126 EVIKKYKEILYEAAEFNLSRRRDEEIFEEARALYQVTYNHAKRQGAVGKCGFAWRVAGLA 185

Query: 539 LVRYYAEKQYQK 574
           L   Y  K  ++
Sbjct: 186 LCTLYVLKNQEE 197

[10][TOP]
>UniRef100_A5ANX1 Putative uncharacterized protein n=1 Tax=Vitis vinifera
            RepID=A5ANX1_VITVI
          Length = 1202

 Score =  135 bits (340), Expect = 2e-30
 Identities = 74/192 (38%), Positives = 110/192 (57%)
 Frame = +2

Query: 5    VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDEV 184
            +K  +L+L D+YY+ALDAPK G  K+ V K+L  E +PH+M R++S+ STSILG I+D V
Sbjct: 1009 LKRKMLELTDIYYDALDAPKSGM-KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAV 1067

Query: 185  CRWQITDVSGIEIRKLPCFDVEIPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEANEV 364
              +Q  + S  +          +P      W   Y QYR +M+ AL       +E A EV
Sbjct: 1068 ESFQPENQSTKDA---------VPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEV 1118

Query: 365  IKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGSVLV 544
            I  YK+I   A    +  + + DI++EALA+YHV Y++A+    V+ C F W+VAG  L 
Sbjct: 1119 INKYKQILYGAAEFEESPRKLEDIFDEALAIYHVTYEFAINGARVSYCNFPWRVAGRALC 1178

Query: 545  RYYAEKQYQKTL 580
            + Y  K  +K++
Sbjct: 1179 KLYTVKLGEKSM 1190

[11][TOP]
>UniRef100_Q5QMN5 Probable RNA-dependent RNA polymerase 3 n=1 Tax=Oryza sativa Japonica
            Group RepID=RDR3_ORYSJ
          Length = 1153

 Score =  135 bits (340), Expect = 2e-30
 Identities = 73/192 (38%), Positives = 108/192 (56%), Gaps = 6/192 (3%)
 Frame = +2

Query: 5    VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFD-- 178
            ++  +LKL+DLYY ALDAPK G  K+ +P DL+V+ YPH+M R  S+ S+SILG I+D  
Sbjct: 949  IEEKMLKLVDLYYLALDAPKTGN-KVNIPSDLMVKQYPHFMGRSFSYHSSSILGQIYDKA 1007

Query: 179  -EVCRWQITDVSGIEIRKLPCF-DVEIPDDYKHKWSSLYIQYRQDMSTALNGK--RPNSN 346
             +V   +  +V  I +  LPCF + E P   +H W   Y +Y  D +        +   N
Sbjct: 1008 EDVESLRSCNVQPIGVSLLPCFMEREAPPAARHLWQHRYEEYLTDSTMLYRAMVDKEERN 1067

Query: 347  EEANEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKV 526
             +  E+ + YK +  DA       +   D+++EA  +Y ++Y+ A    D +RCGFAWKV
Sbjct: 1068 MKFQELYEKYKHMLYDASEFEQTQRDPDDVFSEACVIYQIVYEKARWSNDASRCGFAWKV 1127

Query: 527  AGSVLVRYYAEK 562
            AG  L  +YA K
Sbjct: 1128 AGRALCHFYALK 1139

[12][TOP]
>UniRef100_B9ETN2 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
            RepID=B9ETN2_ORYSJ
          Length = 1148

 Score =  133 bits (335), Expect = 9e-30
 Identities = 73/193 (37%), Positives = 111/193 (57%), Gaps = 7/193 (3%)
 Frame = +2

Query: 5    VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDEV 184
            ++  +LKL+DLYY ALDAPK G  K+ +P+DL+V+ YPH+M R  S+ S+SILG I+D+ 
Sbjct: 934  IEKKMLKLVDLYYLALDAPKMGN-KVNIPRDLMVKQYPHFMDRSPSYHSSSILGKIYDKA 992

Query: 185  CR---WQITDVSGIEIRKLPCF-DVEIPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEE 352
                  +  +V    I  LPCF + ++P   K  W   Y +Y  D S+ L  +  +  E+
Sbjct: 993  GDPKPLRSDNVQPTSISSLPCFAERDVPPAIKQLWQHRYNEYLAD-SSLLYAEEADEEEK 1051

Query: 353  A---NEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWK 523
                 E+ + YK +   A    +  + + D+++EA A+Y + Y+ A    +VARCGFAWK
Sbjct: 1052 KIKFQELYEKYKHLLYGASEFEETPRDLDDVFSEACAIYQIAYEKARSANNVARCGFAWK 1111

Query: 524  VAGSVLVRYYAEK 562
            VAG  L  +Y  K
Sbjct: 1112 VAGRALCHFYTVK 1124

[13][TOP]
>UniRef100_Q5QMN4 Probable RNA-dependent RNA polymerase 4 n=1 Tax=Oryza sativa Japonica
            Group RepID=RDR4_ORYSJ
          Length = 1183

 Score =  133 bits (335), Expect = 9e-30
 Identities = 73/193 (37%), Positives = 111/193 (57%), Gaps = 7/193 (3%)
 Frame = +2

Query: 5    VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDEV 184
            ++  +LKL+DLYY ALDAPK G  K+ +P+DL+V+ YPH+M R  S+ S+SILG I+D+ 
Sbjct: 969  IEKKMLKLVDLYYLALDAPKMGN-KVNIPRDLMVKQYPHFMDRSPSYHSSSILGKIYDKA 1027

Query: 185  CR---WQITDVSGIEIRKLPCF-DVEIPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEE 352
                  +  +V    I  LPCF + ++P   K  W   Y +Y  D S+ L  +  +  E+
Sbjct: 1028 GDPKPLRSDNVQPTSISSLPCFAERDVPPAIKQLWQHRYNEYLAD-SSLLYAEEADEEEK 1086

Query: 353  A---NEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWK 523
                 E+ + YK +   A    +  + + D+++EA A+Y + Y+ A    +VARCGFAWK
Sbjct: 1087 KIKFQELYEKYKHLLYGASEFEETPRDLDDVFSEACAIYQIAYEKARSANNVARCGFAWK 1146

Query: 524  VAGSVLVRYYAEK 562
            VAG  L  +Y  K
Sbjct: 1147 VAGRALCHFYTVK 1159

[14][TOP]
>UniRef100_B8A6J2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
            RepID=B8A6J2_ORYSI
          Length = 1172

 Score =  127 bits (319), Expect = 6e-28
 Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 20/206 (9%)
 Frame = +2

Query: 5    VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDEV 184
            ++  +LKL+DLYY ALDAPK G  K+ +P+DL+V+ YPH+M R  S+ S+SILG I+D+ 
Sbjct: 945  IEKKMLKLVDLYYLALDAPKMGN-KVNIPRDLMVKQYPHFMDRSPSYHSSSILGKIYDKA 1003

Query: 185  CR---WQITDVSGIEIRKLPCF-DVEIPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEE 352
                  +  +V    I  LPCF + ++P   K  W   Y +Y  D S+ L  +  +  E+
Sbjct: 1004 GDPKPLRSDNVQPTSISSLPCFAERDVPPAIKQLWQHRYNEYLAD-SSLLYAEEADEEEK 1062

Query: 353  ANEVIKLYKK----------------IFNDAINIVDGSKSITDIYNEALAVYHVIYDYAM 484
              +  +LY+K                +   A    +  + + D+++EA A+Y + Y+ A 
Sbjct: 1063 KIKFQELYEKYKHLQSSDPIALANIQLLYGASEFEETPRDLDDVFSEACAIYQIAYEKAR 1122

Query: 485  VKKDVARCGFAWKVAGSVLVRYYAEK 562
               +VARCGFAWKVAG  L  +Y  K
Sbjct: 1123 SANNVARCGFAWKVAGRALCHFYTVK 1148

[15][TOP]
>UniRef100_B9HFY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=B9HFY3_POPTR
          Length = 189

 Score =  124 bits (312), Expect = 4e-27
 Identities = 67/164 (40%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
 Frame = +2

Query: 77  KIQVPKDLIVEMYPHYMKRDN--SFTSTSILGSIFDEVCRWQITDVSGIEIRKLPCFDVE 250
           +I+VP+ L  E++PH+M ++   ++ STSILG I+D+V  ++  D+S  ++ KLPCFD E
Sbjct: 9   QIEVPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPCFDGE 68

Query: 251 IPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEANEVIKLYKKIFNDAINIVDGSKSIT 430
           + +    KW  LY QYR +M  AL   +   N EANEVIK YK+I  +A       +   
Sbjct: 69  VHESCLVKWKGLYGQYRTEMRNALQAGK-EKNNEANEVIKKYKEILYEAAEFNLSRRRDE 127

Query: 431 DIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGSVLVRYYAEK 562
           +I+ EA A+Y V Y++A  +  V  C FAW+VAG  L   Y  K
Sbjct: 128 EIFEEARALYQVTYNHAKSQGVVGNCSFAWRVAGLALCTLYVLK 171

[16][TOP]
>UniRef100_B8A6J1 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
            RepID=B8A6J1_ORYSI
          Length = 1155

 Score =  113 bits (282), Expect = 1e-23
 Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
 Frame = +2

Query: 5    VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDEV 184
            ++  ++KL+DLYY ALDAPK G  K+ +P DL+V+ YPH+M R  SF            +
Sbjct: 969  IEEKMIKLVDLYYLALDAPKTGN-KVNIPSDLMVKQYPHFMGR--SF------------I 1013

Query: 185  CRWQITDVSGIEIRKLPCF-DVEIPDDYKHKWSSLYIQYRQDMSTALNGK--RPNSNEEA 355
            CR          +  LPCF + E P   +H W   Y +Y  D +        +   N + 
Sbjct: 1014 CR----------VSLLPCFMEREAPPAARHLWQHRYEEYLTDSTMLYRAMVDKEERNMKF 1063

Query: 356  NEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGS 535
             E+ + YK +  DA       +   D+++EA  +Y ++Y+ A    D +RCGFAWKVAG 
Sbjct: 1064 QELYEKYKHMLYDASEFEQTQRDPDDVFSEACVIYQIVYEKARWSNDASRCGFAWKVAGR 1123

Query: 536  VLVRYYAEK 562
             L  +YA K
Sbjct: 1124 ALCHFYALK 1132

[17][TOP]
>UniRef100_UPI000034ED41 RNA-dependent RNA polymerase family protein n=1 Tax=Arabidopsis
            thaliana RepID=UPI000034ED41
          Length = 927

 Score =  110 bits (274), Expect = 1e-22
 Identities = 60/156 (38%), Positives = 98/156 (62%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2    QVKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDE 181
            ++K  +LKL D+YY+A+DAPK G  ++ +P D+ V+++PHYM+R+ +F STSILG IFD 
Sbjct: 775  EMKKKMLKLTDIYYDAIDAPKTGT-EVNLPLDVKVDLFPHYMERNKTFKSTSILGLIFDT 833

Query: 182  VCRWQITDVSGIEIRKLPCFDVEIPDDYKHKWSSLYIQ-YRQDMSTALNGKRPNSNEEAN 358
            V      D +   I KL CF+ E   ++  +   L+ + YR++M  A+N    + ++  N
Sbjct: 834  VDFHNAEDTTPSGISKLQCFEDEPVSEFDMEKCKLWHKDYRKEMCQAMNS---DDDDSCN 890

Query: 359  EVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHV 466
            EVI+ YK+ F  A    +  K + ++Y +ALA+Y+V
Sbjct: 891  EVIQKYKQEFYSAAGFKESKKILEELYPKALALYNV 926

[18][TOP]
>UniRef100_C5YC79 Putative uncharacterized protein Sb06g001600 n=1 Tax=Sorghum
           bicolor RepID=C5YC79_SORBI
          Length = 204

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 4/165 (2%)
 Frame = +2

Query: 80  IQVPKDLIVEMYPHYM-KRDNSFTSTSILGSIFDEVCRW--QITDVSGIEIRKLPCFD-V 247
           + V ++L VE YPH+M K+  S+ STSILG I+DE  +   Q  D   I+I  LPCFD V
Sbjct: 19  VTVDRNLRVEAYPHFMEKKGKSYHSTSILGKIYDETEKIISQQCDEQ-IQITTLPCFDEV 77

Query: 248 EIPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEANEVIKLYKKIFNDAINIVDGSKSI 427
           E        W   Y +Y        + ++   N+E  ++ + YK +  +A    + S+ +
Sbjct: 78  EATPACTSLWEQRYQEYLTKSRQLFDLEKEEKNDEFQKLYQSYKHLLYNANEFEETSRDL 137

Query: 428 TDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGSVLVRYYAEK 562
           +D++ EA A+Y ++Y+ A   + + +C F W VAG+ L   +A K
Sbjct: 138 SDVFMEACAIYRIVYERARSTRSLTKCRFVWNVAGAALCYLHATK 182

[19][TOP]
>UniRef100_O82189 Putative uncharacterized protein At2g19920 n=1 Tax=Arabidopsis
            thaliana RepID=O82189_ARATH
          Length = 905

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 53/137 (38%), Positives = 85/137 (62%), Gaps = 9/137 (6%)
 Frame = +2

Query: 2    QVKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDE 181
            ++K  +LKL D+YY+A+DAPK G  ++ +P D+ V+++PHYM+R+ +F STSILG IFD 
Sbjct: 771  EMKKKMLKLTDIYYDAIDAPKTGT-EVNLPLDVKVDLFPHYMERNKTFKSTSILGLIFDT 829

Query: 182  VCRWQITD--------VSGIEIRKLPCFDVEIPDDYKHKWSSLYIQ-YRQDMSTALNGKR 334
            V      D        +SGI   KL CF+ E   ++  +   L+ + YR++M  A+N   
Sbjct: 830  VDFHNAEDTTPSALGYLSGIS--KLQCFEDEPVSEFDMEKCKLWHKDYRKEMCQAMNS-- 885

Query: 335  PNSNEEANEVIKLYKKI 385
             + ++  NEVI+ YK++
Sbjct: 886  -DDDDSCNEVIQKYKQV 901

[20][TOP]
>UniRef100_A9TZH6 RNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
            patens RepID=A9TZH6_PHYPA
          Length = 1042

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
 Frame = +2

Query: 5    VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNS------FTSTSILG 166
            +   IL+LID++Y ALDA K  G ++++ + L  + YPH+M++ N       +TSTSILG
Sbjct: 835  LSETILELIDIFYRALDADKT-GEEVKLRRGLEPKCYPHFMRKQNQTSRRTYYTSTSILG 893

Query: 167  SIFDEVCRWQITDVSGIEIRKLPCFDVEIP----DDYKHKWSSLYIQYRQDMSTALNGKR 334
             I+D V +    D  G    +   +D +      D Y   W  L  QY +D   A     
Sbjct: 894  QIYDMVDK--NADRLGYRPEETIAYDPKFEFGRFDRYIENWRGLLQQYNKDTQAAF---- 947

Query: 335  PNSNEEANEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYA---MVKKDVAR 505
               N E + VI  Y++I          +KSI  +  EA A+Y V +++A   + K     
Sbjct: 948  --KNNELDRVIARYQEILKGQ------NKSIIQVLEEASALYIVNHEHAEMTLRKGYTPT 999

Query: 506  CGFAWKVAGSVLVRYYAEKQYQK 574
               AW VA   L   YA ++ +K
Sbjct: 1000 LNCAWNVALEYLCEIYASQEERK 1022

[21][TOP]
>UniRef100_A9TF55 RNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
            patens RepID=A9TF55_PHYPA
          Length = 1040

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 24/214 (11%)
 Frame = +2

Query: 5    VKSNILKLIDLYYEALDAPKKGGG-----------KIQVPKDLIVEMYPHYMKRDNS--- 142
            +  ++ +LID++Y ALDA K G              +++P+ L  + +PH++K   +   
Sbjct: 823  ISESLEELIDIFYRALDADKTGEELCLHRHTFAWMSVKLPRRLEPDCFPHFLKEIQTNRT 882

Query: 143  -FTSTSILGSIFDEVCRWQITDVSGI------EIRKLPCFDVEIPDDYKHKWSSLYIQYR 301
             +TSTSILG I+D V R    +V GI       I   P F+    D Y  +W  L  QY 
Sbjct: 883  YYTSTSILGQIYDMVVR----NVDGIGCKPEETIAYDPKFEYGRFDRYMERWRGLLQQYN 938

Query: 302  QDMSTALNGKRPNSNEEANEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYA 481
            +D+  A+       N E + VI  Y++I          +KSIT ++ EA A+Y V +++A
Sbjct: 939  KDIKAAI------KNHEEDRVIAYYQEILQGT------NKSITQMWEEASALYAVNHEHA 986

Query: 482  MV---KKDVARCGFAWKVAGSVLVRYYAEKQYQK 574
            ++   K  +     A  VA   L   YA  + +K
Sbjct: 987  VMTLRKGHLPSLHCALTVALEYLCGIYASNEERK 1020