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[1][TOP]
>UniRef100_UPI000034ED40 RNA-dependent RNA polymerase family protein n=1 Tax=Arabidopsis
thaliana RepID=UPI000034ED40
Length = 992
Score = 160 bits (405), Expect = 7e-38
Identities = 90/195 (46%), Positives = 127/195 (65%), Gaps = 4/195 (2%)
Frame = +2
Query: 8 KSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRD--NSFTSTSILGSIFDE 181
K NILKLID+YY+ALDAPKKG K+ +P DL ++ +PHYM+RD F STSILG IFD
Sbjct: 788 KKNILKLIDIYYDALDAPKKGA-KVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFDT 846
Query: 182 VCRWQITDVSGIEIRKLPCFDVE-IPDDYKHKWSSLYIQYRQDMSTAL-NGKRPNSNEEA 355
V + EI KL F+ E +P + K++S Y YR +MS A+ + N+
Sbjct: 847 VDSHNAEEPPPSEISKLWYFEDEPVPKSHMDKFTSWYENYRSEMSQAMMETDKVKRNQLT 906
Query: 356 NEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGS 535
NEVI+ YK+ F A D +KS+ ++Y +ALA+Y+V+YDYA +++ VA+C FAW VAG
Sbjct: 907 NEVIQRYKQDFYGAAGFEDSNKSLEELYPQALALYNVVYDYA-IQEGVAKCTFAWNVAGP 965
Query: 536 VLVRYYAEKQYQKTL 580
VL ++Y +K K++
Sbjct: 966 VLCKFYLKKTKDKSV 980
[2][TOP]
>UniRef100_O82190 Putative uncharacterized protein At2g19910 n=1 Tax=Arabidopsis
thaliana RepID=O82190_ARATH
Length = 966
Score = 160 bits (405), Expect = 7e-38
Identities = 90/195 (46%), Positives = 127/195 (65%), Gaps = 4/195 (2%)
Frame = +2
Query: 8 KSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRD--NSFTSTSILGSIFDE 181
K NILKLID+YY+ALDAPKKG K+ +P DL ++ +PHYM+RD F STSILG IFD
Sbjct: 762 KKNILKLIDIYYDALDAPKKGA-KVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFDT 820
Query: 182 VCRWQITDVSGIEIRKLPCFDVE-IPDDYKHKWSSLYIQYRQDMSTAL-NGKRPNSNEEA 355
V + EI KL F+ E +P + K++S Y YR +MS A+ + N+
Sbjct: 821 VDSHNAEEPPPSEISKLWYFEDEPVPKSHMDKFTSWYENYRSEMSQAMMETDKVKRNQLT 880
Query: 356 NEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGS 535
NEVI+ YK+ F A D +KS+ ++Y +ALA+Y+V+YDYA +++ VA+C FAW VAG
Sbjct: 881 NEVIQRYKQDFYGAAGFEDSNKSLEELYPQALALYNVVYDYA-IQEGVAKCTFAWNVAGP 939
Query: 536 VLVRYYAEKQYQKTL 580
VL ++Y +K K++
Sbjct: 940 VLCKFYLKKTKDKSV 954
[3][TOP]
>UniRef100_UPI000034ED42 RNA-dependent RNA polymerase family protein n=1 Tax=Arabidopsis
thaliana RepID=UPI000034ED42
Length = 977
Score = 156 bits (394), Expect = 1e-36
Identities = 86/193 (44%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Frame = +2
Query: 2 QVKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDE 181
++K +L+LID+YY+ALDAPKKG K+ +P L +++PHYM+RD F STSILG IFD
Sbjct: 775 EMKKKMLELIDIYYDALDAPKKGD-KVYLPNKLKPDIFPHYMERDKKFQSTSILGLIFDF 833
Query: 182 VCRWQITDVS-GIEIRKLPCFDVE-IPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEA 355
V + S EI KLPCF+ E + + + K Y YR +M+ A+ + + +E A
Sbjct: 834 VKSQTTEEPSPSSEISKLPCFEDEPVSEFHMQKCRLWYDNYRTEMTQAM---KTDKDESA 890
Query: 356 NEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGS 535
NEVI+ YK+ F A D KS+ ++Y +ALA+Y ++YDYA + V++C F WKVAG
Sbjct: 891 NEVIQRYKQEFYGAAGFEDSKKSLEELYPQALALYKIVYDYA-IHAGVSKCRFVWKVAGP 949
Query: 536 VLVRYYAEKQYQK 574
VL R+Y K+ Q+
Sbjct: 950 VLCRFYLNKKMQE 962
[4][TOP]
>UniRef100_Q0WNQ6 Putative uncharacterized protein At2g19930 (Fragment) n=1
Tax=Arabidopsis thaliana RepID=Q0WNQ6_ARATH
Length = 339
Score = 156 bits (394), Expect = 1e-36
Identities = 86/193 (44%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Frame = +2
Query: 2 QVKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDE 181
++K +L+LID+YY+ALDAPKKG K+ +P L +++PHYM+RD F STSILG IFD
Sbjct: 137 EMKKKMLELIDIYYDALDAPKKGD-KVYLPNKLKPDIFPHYMERDKKFQSTSILGLIFDF 195
Query: 182 VCRWQITDVS-GIEIRKLPCFDVE-IPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEA 355
V + S EI KLPCF+ E + + + K Y YR +M+ A+ + + +E A
Sbjct: 196 VKSQTTEEPSPSSEISKLPCFEDEPVSEFHMQKCRLWYDNYRTEMTQAM---KTDKDESA 252
Query: 356 NEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGS 535
NEVI+ YK+ F A D KS+ ++Y +ALA+Y ++YDYA + V++C F WKVAG
Sbjct: 253 NEVIQRYKQEFYGAAGFEDSKKSLEELYPQALALYKIVYDYA-IHAGVSKCRFVWKVAGP 311
Query: 536 VLVRYYAEKQYQK 574
VL R+Y K+ Q+
Sbjct: 312 VLCRFYLNKKMQE 324
[5][TOP]
>UniRef100_C5XLU8 Putative uncharacterized protein Sb03g002800 n=1 Tax=Sorghum bicolor
RepID=C5XLU8_SORBI
Length = 1127
Score = 153 bits (387), Expect = 8e-36
Identities = 83/191 (43%), Positives = 117/191 (61%), Gaps = 4/191 (2%)
Frame = +2
Query: 5 VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDN--SFTSTSILGSIFD 178
+K +L L+D+YY ALDAPK+G KI VP +L V+ YPH+M+RD S+TSTS+LG I+D
Sbjct: 917 IKKKMLDLVDIYYLALDAPKEGN-KITVPGELKVKKYPHFMERDEKKSYTSTSVLGKIYD 975
Query: 179 EVCRWQITDVSGIEIRKLPCF-DVEIPDDYKHKWSSLYIQY-RQDMSTALNGKRPNSNEE 352
EV + I+I L CF +V++ +DYK +W SLY QY R+ + N
Sbjct: 976 EVMLKESEIDPEIKIVPLSCFTEVKVSEDYKGRWRSLYYQYLRESTDLCKLEDKAEKNNN 1035
Query: 353 ANEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAG 532
++ + YK+ +A + D+ NEA AVY V+Y+YAM + D+A+CGFAWKVAG
Sbjct: 1036 YRQLYQEYKRKLYEAEEFEQSPREQLDLLNEACAVYQVVYEYAMSRNDIAKCGFAWKVAG 1095
Query: 533 SVLVRYYAEKQ 565
L R Y K+
Sbjct: 1096 RALCRLYTLKR 1106
[6][TOP]
>UniRef100_UPI00019842AC PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019842AC
Length = 943
Score = 148 bits (374), Expect = 3e-34
Identities = 78/193 (40%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Frame = +2
Query: 5 VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDEV 184
+K +L+L D+YY+ALDAPK G K+ V K+L E +PH+M R++S+ STSILG I+D V
Sbjct: 740 LKRKMLELTDIYYDALDAPKSGM-KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAV 798
Query: 185 CRWQITDVSGIEIRKLPCFDVE-IPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEANE 361
+Q + S EI +LP F+++ +P W Y QYR +M+ AL +E A E
Sbjct: 799 ESFQPENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAE 858
Query: 362 VIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGSVL 541
VI YK+I A + +++ DI++EALA+YHV Y++ + V+ C F W+VAG L
Sbjct: 859 VINKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRAL 918
Query: 542 VRYYAEKQYQKTL 580
+ Y K +K++
Sbjct: 919 CKLYTVKLGEKSM 931
[7][TOP]
>UniRef100_A7PEI0 Chromosome chr11 scaffold_13, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PEI0_VITVI
Length = 788
Score = 148 bits (374), Expect = 3e-34
Identities = 78/193 (40%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Frame = +2
Query: 5 VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDEV 184
+K +L+L D+YY+ALDAPK G K+ V K+L E +PH+M R++S+ STSILG I+D V
Sbjct: 585 LKRKMLELTDIYYDALDAPKSGM-KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAV 643
Query: 185 CRWQITDVSGIEIRKLPCFDVE-IPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEANE 361
+Q + S EI +LP F+++ +P W Y QYR +M+ AL +E A E
Sbjct: 644 ESFQPENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAE 703
Query: 362 VIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGSVL 541
VI YK+I A + +++ DI++EALA+YHV Y++ + V+ C F W+VAG L
Sbjct: 704 VINKYKQILYGAAEFEESPRNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRAL 763
Query: 542 VRYYAEKQYQKTL 580
+ Y K +K++
Sbjct: 764 CKLYTVKLGEKSM 776
[8][TOP]
>UniRef100_O82188 Putative uncharacterized protein At2g19930 n=1 Tax=Arabidopsis
thaliana RepID=O82188_ARATH
Length = 929
Score = 147 bits (370), Expect = 8e-34
Identities = 88/226 (38%), Positives = 128/226 (56%), Gaps = 35/226 (15%)
Frame = +2
Query: 2 QVKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDE 181
++K +L+LID+YY+ALDAPKKG K+ +P L +++PHYM+RD F STSILG IFD
Sbjct: 695 EMKKKMLELIDIYYDALDAPKKGD-KVYLPNKLKPDIFPHYMERDKKFQSTSILGLIFDF 753
Query: 182 VCRWQITD----------------------------------VSGIEIRKLPCFDVE-IP 256
V + Q T+ V +EI KLPCF+ E +
Sbjct: 754 V-KSQTTEEPSPSSGKGPLLVLLYTYNQITKEIINHDMCFTVVYNLEISKLPCFEDEPVS 812
Query: 257 DDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEANEVIKLYKKIFNDAINIVDGSKSITDI 436
+ + K Y YR +M+ A+ + + +E ANEVI+ YK+ F A D KS+ ++
Sbjct: 813 EFHMQKCRLWYDNYRTEMTQAM---KTDKDESANEVIQRYKQEFYGAAGFEDSKKSLEEL 869
Query: 437 YNEALAVYHVIYDYAMVKKDVARCGFAWKVAGSVLVRYYAEKQYQK 574
Y +ALA+Y ++YDYA + V++C F WKVAG VL R+Y K+ Q+
Sbjct: 870 YPQALALYKIVYDYA-IHAGVSKCRFVWKVAGPVLCRFYLNKKMQE 914
[9][TOP]
>UniRef100_B9P554 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=B9P554_POPTR
Length = 211
Score = 142 bits (357), Expect = 2e-32
Identities = 80/192 (41%), Positives = 114/192 (59%), Gaps = 2/192 (1%)
Frame = +2
Query: 5 VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDN--SFTSTSILGSIFD 178
VK NI LID+YY+ALDAPKKGG KI+VP+ L E++PH+M++ ++ STSILG I+D
Sbjct: 18 VKKNINLLIDIYYDALDAPKKGGRKIEVPEALKAELFPHFMEKHEKKTYRSTSILGKIYD 77
Query: 179 EVCRWQITDVSGIEIRKLPCFDVEIPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEAN 358
+V ++ D+S + + KW LY QYR +M AL + +NE AN
Sbjct: 78 KVKAYEDMDLSS-----------NVHESCLVKWKGLYGQYRTEMRNALQAGKEKNNE-AN 125
Query: 359 EVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGSV 538
EVIK YK+I +A + +I+ EA A+Y V Y++A + V +CGFAW+VAG
Sbjct: 126 EVIKKYKEILYEAAEFNLSRRRDEEIFEEARALYQVTYNHAKRQGAVGKCGFAWRVAGLA 185
Query: 539 LVRYYAEKQYQK 574
L Y K ++
Sbjct: 186 LCTLYVLKNQEE 197
[10][TOP]
>UniRef100_A5ANX1 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5ANX1_VITVI
Length = 1202
Score = 135 bits (340), Expect = 2e-30
Identities = 74/192 (38%), Positives = 110/192 (57%)
Frame = +2
Query: 5 VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDEV 184
+K +L+L D+YY+ALDAPK G K+ V K+L E +PH+M R++S+ STSILG I+D V
Sbjct: 1009 LKRKMLELTDIYYDALDAPKSGM-KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAV 1067
Query: 185 CRWQITDVSGIEIRKLPCFDVEIPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEANEV 364
+Q + S + +P W Y QYR +M+ AL +E A EV
Sbjct: 1068 ESFQPENQSTKDA---------VPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEV 1118
Query: 365 IKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGSVLV 544
I YK+I A + + + DI++EALA+YHV Y++A+ V+ C F W+VAG L
Sbjct: 1119 INKYKQILYGAAEFEESPRKLEDIFDEALAIYHVTYEFAINGARVSYCNFPWRVAGRALC 1178
Query: 545 RYYAEKQYQKTL 580
+ Y K +K++
Sbjct: 1179 KLYTVKLGEKSM 1190
[11][TOP]
>UniRef100_Q5QMN5 Probable RNA-dependent RNA polymerase 3 n=1 Tax=Oryza sativa Japonica
Group RepID=RDR3_ORYSJ
Length = 1153
Score = 135 bits (340), Expect = 2e-30
Identities = 73/192 (38%), Positives = 108/192 (56%), Gaps = 6/192 (3%)
Frame = +2
Query: 5 VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFD-- 178
++ +LKL+DLYY ALDAPK G K+ +P DL+V+ YPH+M R S+ S+SILG I+D
Sbjct: 949 IEEKMLKLVDLYYLALDAPKTGN-KVNIPSDLMVKQYPHFMGRSFSYHSSSILGQIYDKA 1007
Query: 179 -EVCRWQITDVSGIEIRKLPCF-DVEIPDDYKHKWSSLYIQYRQDMSTALNGK--RPNSN 346
+V + +V I + LPCF + E P +H W Y +Y D + + N
Sbjct: 1008 EDVESLRSCNVQPIGVSLLPCFMEREAPPAARHLWQHRYEEYLTDSTMLYRAMVDKEERN 1067
Query: 347 EEANEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKV 526
+ E+ + YK + DA + D+++EA +Y ++Y+ A D +RCGFAWKV
Sbjct: 1068 MKFQELYEKYKHMLYDASEFEQTQRDPDDVFSEACVIYQIVYEKARWSNDASRCGFAWKV 1127
Query: 527 AGSVLVRYYAEK 562
AG L +YA K
Sbjct: 1128 AGRALCHFYALK 1139
[12][TOP]
>UniRef100_B9ETN2 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9ETN2_ORYSJ
Length = 1148
Score = 133 bits (335), Expect = 9e-30
Identities = 73/193 (37%), Positives = 111/193 (57%), Gaps = 7/193 (3%)
Frame = +2
Query: 5 VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDEV 184
++ +LKL+DLYY ALDAPK G K+ +P+DL+V+ YPH+M R S+ S+SILG I+D+
Sbjct: 934 IEKKMLKLVDLYYLALDAPKMGN-KVNIPRDLMVKQYPHFMDRSPSYHSSSILGKIYDKA 992
Query: 185 CR---WQITDVSGIEIRKLPCF-DVEIPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEE 352
+ +V I LPCF + ++P K W Y +Y D S+ L + + E+
Sbjct: 993 GDPKPLRSDNVQPTSISSLPCFAERDVPPAIKQLWQHRYNEYLAD-SSLLYAEEADEEEK 1051
Query: 353 A---NEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWK 523
E+ + YK + A + + + D+++EA A+Y + Y+ A +VARCGFAWK
Sbjct: 1052 KIKFQELYEKYKHLLYGASEFEETPRDLDDVFSEACAIYQIAYEKARSANNVARCGFAWK 1111
Query: 524 VAGSVLVRYYAEK 562
VAG L +Y K
Sbjct: 1112 VAGRALCHFYTVK 1124
[13][TOP]
>UniRef100_Q5QMN4 Probable RNA-dependent RNA polymerase 4 n=1 Tax=Oryza sativa Japonica
Group RepID=RDR4_ORYSJ
Length = 1183
Score = 133 bits (335), Expect = 9e-30
Identities = 73/193 (37%), Positives = 111/193 (57%), Gaps = 7/193 (3%)
Frame = +2
Query: 5 VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDEV 184
++ +LKL+DLYY ALDAPK G K+ +P+DL+V+ YPH+M R S+ S+SILG I+D+
Sbjct: 969 IEKKMLKLVDLYYLALDAPKMGN-KVNIPRDLMVKQYPHFMDRSPSYHSSSILGKIYDKA 1027
Query: 185 CR---WQITDVSGIEIRKLPCF-DVEIPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEE 352
+ +V I LPCF + ++P K W Y +Y D S+ L + + E+
Sbjct: 1028 GDPKPLRSDNVQPTSISSLPCFAERDVPPAIKQLWQHRYNEYLAD-SSLLYAEEADEEEK 1086
Query: 353 A---NEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWK 523
E+ + YK + A + + + D+++EA A+Y + Y+ A +VARCGFAWK
Sbjct: 1087 KIKFQELYEKYKHLLYGASEFEETPRDLDDVFSEACAIYQIAYEKARSANNVARCGFAWK 1146
Query: 524 VAGSVLVRYYAEK 562
VAG L +Y K
Sbjct: 1147 VAGRALCHFYTVK 1159
[14][TOP]
>UniRef100_B8A6J2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8A6J2_ORYSI
Length = 1172
Score = 127 bits (319), Expect = 6e-28
Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 20/206 (9%)
Frame = +2
Query: 5 VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDEV 184
++ +LKL+DLYY ALDAPK G K+ +P+DL+V+ YPH+M R S+ S+SILG I+D+
Sbjct: 945 IEKKMLKLVDLYYLALDAPKMGN-KVNIPRDLMVKQYPHFMDRSPSYHSSSILGKIYDKA 1003
Query: 185 CR---WQITDVSGIEIRKLPCF-DVEIPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEE 352
+ +V I LPCF + ++P K W Y +Y D S+ L + + E+
Sbjct: 1004 GDPKPLRSDNVQPTSISSLPCFAERDVPPAIKQLWQHRYNEYLAD-SSLLYAEEADEEEK 1062
Query: 353 ANEVIKLYKK----------------IFNDAINIVDGSKSITDIYNEALAVYHVIYDYAM 484
+ +LY+K + A + + + D+++EA A+Y + Y+ A
Sbjct: 1063 KIKFQELYEKYKHLQSSDPIALANIQLLYGASEFEETPRDLDDVFSEACAIYQIAYEKAR 1122
Query: 485 VKKDVARCGFAWKVAGSVLVRYYAEK 562
+VARCGFAWKVAG L +Y K
Sbjct: 1123 SANNVARCGFAWKVAGRALCHFYTVK 1148
[15][TOP]
>UniRef100_B9HFY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=B9HFY3_POPTR
Length = 189
Score = 124 bits (312), Expect = 4e-27
Identities = 67/164 (40%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
Frame = +2
Query: 77 KIQVPKDLIVEMYPHYMKRDN--SFTSTSILGSIFDEVCRWQITDVSGIEIRKLPCFDVE 250
+I+VP+ L E++PH+M ++ ++ STSILG I+D+V ++ D+S ++ KLPCFD E
Sbjct: 9 QIEVPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPCFDGE 68
Query: 251 IPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEANEVIKLYKKIFNDAINIVDGSKSIT 430
+ + KW LY QYR +M AL + N EANEVIK YK+I +A +
Sbjct: 69 VHESCLVKWKGLYGQYRTEMRNALQAGK-EKNNEANEVIKKYKEILYEAAEFNLSRRRDE 127
Query: 431 DIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGSVLVRYYAEK 562
+I+ EA A+Y V Y++A + V C FAW+VAG L Y K
Sbjct: 128 EIFEEARALYQVTYNHAKSQGVVGNCSFAWRVAGLALCTLYVLK 171
[16][TOP]
>UniRef100_B8A6J1 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8A6J1_ORYSI
Length = 1155
Score = 113 bits (282), Expect = 1e-23
Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Frame = +2
Query: 5 VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDEV 184
++ ++KL+DLYY ALDAPK G K+ +P DL+V+ YPH+M R SF +
Sbjct: 969 IEEKMIKLVDLYYLALDAPKTGN-KVNIPSDLMVKQYPHFMGR--SF------------I 1013
Query: 185 CRWQITDVSGIEIRKLPCF-DVEIPDDYKHKWSSLYIQYRQDMSTALNGK--RPNSNEEA 355
CR + LPCF + E P +H W Y +Y D + + N +
Sbjct: 1014 CR----------VSLLPCFMEREAPPAARHLWQHRYEEYLTDSTMLYRAMVDKEERNMKF 1063
Query: 356 NEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGS 535
E+ + YK + DA + D+++EA +Y ++Y+ A D +RCGFAWKVAG
Sbjct: 1064 QELYEKYKHMLYDASEFEQTQRDPDDVFSEACVIYQIVYEKARWSNDASRCGFAWKVAGR 1123
Query: 536 VLVRYYAEK 562
L +YA K
Sbjct: 1124 ALCHFYALK 1132
[17][TOP]
>UniRef100_UPI000034ED41 RNA-dependent RNA polymerase family protein n=1 Tax=Arabidopsis
thaliana RepID=UPI000034ED41
Length = 927
Score = 110 bits (274), Expect = 1e-22
Identities = 60/156 (38%), Positives = 98/156 (62%), Gaps = 1/156 (0%)
Frame = +2
Query: 2 QVKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDE 181
++K +LKL D+YY+A+DAPK G ++ +P D+ V+++PHYM+R+ +F STSILG IFD
Sbjct: 775 EMKKKMLKLTDIYYDAIDAPKTGT-EVNLPLDVKVDLFPHYMERNKTFKSTSILGLIFDT 833
Query: 182 VCRWQITDVSGIEIRKLPCFDVEIPDDYKHKWSSLYIQ-YRQDMSTALNGKRPNSNEEAN 358
V D + I KL CF+ E ++ + L+ + YR++M A+N + ++ N
Sbjct: 834 VDFHNAEDTTPSGISKLQCFEDEPVSEFDMEKCKLWHKDYRKEMCQAMNS---DDDDSCN 890
Query: 359 EVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHV 466
EVI+ YK+ F A + K + ++Y +ALA+Y+V
Sbjct: 891 EVIQKYKQEFYSAAGFKESKKILEELYPKALALYNV 926
[18][TOP]
>UniRef100_C5YC79 Putative uncharacterized protein Sb06g001600 n=1 Tax=Sorghum
bicolor RepID=C5YC79_SORBI
Length = 204
Score = 95.1 bits (235), Expect = 3e-18
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 4/165 (2%)
Frame = +2
Query: 80 IQVPKDLIVEMYPHYM-KRDNSFTSTSILGSIFDEVCRW--QITDVSGIEIRKLPCFD-V 247
+ V ++L VE YPH+M K+ S+ STSILG I+DE + Q D I+I LPCFD V
Sbjct: 19 VTVDRNLRVEAYPHFMEKKGKSYHSTSILGKIYDETEKIISQQCDEQ-IQITTLPCFDEV 77
Query: 248 EIPDDYKHKWSSLYIQYRQDMSTALNGKRPNSNEEANEVIKLYKKIFNDAINIVDGSKSI 427
E W Y +Y + ++ N+E ++ + YK + +A + S+ +
Sbjct: 78 EATPACTSLWEQRYQEYLTKSRQLFDLEKEEKNDEFQKLYQSYKHLLYNANEFEETSRDL 137
Query: 428 TDIYNEALAVYHVIYDYAMVKKDVARCGFAWKVAGSVLVRYYAEK 562
+D++ EA A+Y ++Y+ A + + +C F W VAG+ L +A K
Sbjct: 138 SDVFMEACAIYRIVYERARSTRSLTKCRFVWNVAGAALCYLHATK 182
[19][TOP]
>UniRef100_O82189 Putative uncharacterized protein At2g19920 n=1 Tax=Arabidopsis
thaliana RepID=O82189_ARATH
Length = 905
Score = 89.0 bits (219), Expect = 2e-16
Identities = 53/137 (38%), Positives = 85/137 (62%), Gaps = 9/137 (6%)
Frame = +2
Query: 2 QVKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNSFTSTSILGSIFDE 181
++K +LKL D+YY+A+DAPK G ++ +P D+ V+++PHYM+R+ +F STSILG IFD
Sbjct: 771 EMKKKMLKLTDIYYDAIDAPKTGT-EVNLPLDVKVDLFPHYMERNKTFKSTSILGLIFDT 829
Query: 182 VCRWQITD--------VSGIEIRKLPCFDVEIPDDYKHKWSSLYIQ-YRQDMSTALNGKR 334
V D +SGI KL CF+ E ++ + L+ + YR++M A+N
Sbjct: 830 VDFHNAEDTTPSALGYLSGIS--KLQCFEDEPVSEFDMEKCKLWHKDYRKEMCQAMNS-- 885
Query: 335 PNSNEEANEVIKLYKKI 385
+ ++ NEVI+ YK++
Sbjct: 886 -DDDDSCNEVIQKYKQV 901
[20][TOP]
>UniRef100_A9TZH6 RNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TZH6_PHYPA
Length = 1042
Score = 79.3 bits (194), Expect = 2e-13
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Frame = +2
Query: 5 VKSNILKLIDLYYEALDAPKKGGGKIQVPKDLIVEMYPHYMKRDNS------FTSTSILG 166
+ IL+LID++Y ALDA K G ++++ + L + YPH+M++ N +TSTSILG
Sbjct: 835 LSETILELIDIFYRALDADKT-GEEVKLRRGLEPKCYPHFMRKQNQTSRRTYYTSTSILG 893
Query: 167 SIFDEVCRWQITDVSGIEIRKLPCFDVEIP----DDYKHKWSSLYIQYRQDMSTALNGKR 334
I+D V + D G + +D + D Y W L QY +D A
Sbjct: 894 QIYDMVDK--NADRLGYRPEETIAYDPKFEFGRFDRYIENWRGLLQQYNKDTQAAF---- 947
Query: 335 PNSNEEANEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYA---MVKKDVAR 505
N E + VI Y++I +KSI + EA A+Y V +++A + K
Sbjct: 948 --KNNELDRVIARYQEILKGQ------NKSIIQVLEEASALYIVNHEHAEMTLRKGYTPT 999
Query: 506 CGFAWKVAGSVLVRYYAEKQYQK 574
AW VA L YA ++ +K
Sbjct: 1000 LNCAWNVALEYLCEIYASQEERK 1022
[21][TOP]
>UniRef100_A9TF55 RNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TF55_PHYPA
Length = 1040
Score = 76.6 bits (187), Expect = 1e-12
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 24/214 (11%)
Frame = +2
Query: 5 VKSNILKLIDLYYEALDAPKKGGG-----------KIQVPKDLIVEMYPHYMKRDNS--- 142
+ ++ +LID++Y ALDA K G +++P+ L + +PH++K +
Sbjct: 823 ISESLEELIDIFYRALDADKTGEELCLHRHTFAWMSVKLPRRLEPDCFPHFLKEIQTNRT 882
Query: 143 -FTSTSILGSIFDEVCRWQITDVSGI------EIRKLPCFDVEIPDDYKHKWSSLYIQYR 301
+TSTSILG I+D V R +V GI I P F+ D Y +W L QY
Sbjct: 883 YYTSTSILGQIYDMVVR----NVDGIGCKPEETIAYDPKFEYGRFDRYMERWRGLLQQYN 938
Query: 302 QDMSTALNGKRPNSNEEANEVIKLYKKIFNDAINIVDGSKSITDIYNEALAVYHVIYDYA 481
+D+ A+ N E + VI Y++I +KSIT ++ EA A+Y V +++A
Sbjct: 939 KDIKAAI------KNHEEDRVIAYYQEILQGT------NKSITQMWEEASALYAVNHEHA 986
Query: 482 MV---KKDVARCGFAWKVAGSVLVRYYAEKQYQK 574
++ K + A VA L YA + +K
Sbjct: 987 VMTLRKGHLPSLHCALTVALEYLCGIYASNEERK 1020