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[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
RepID=UPI0000163E03
Length = 824
Score = 290 bits (742), Expect = 5e-77
Identities = 139/190 (73%), Positives = 159/190 (83%)
Frame = +2
Query: 2 FYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSS 181
FYT +LGV GPHYKP E DFIVSTEPLKMG+ GEHVPI+YG GVG LPTK WV+ FG+ S
Sbjct: 580 FYTEMLGVAGPHYKPQENDFIVSTEPLKMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRPS 639
Query: 182 SLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRN 361
LKN GYLI+P+LR Q+EAGKR++FMSPAPYVANNAALIAFG+ K+L Q+DALVHYRN
Sbjct: 640 QLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANNAALIAFGTGGKMLIQKDALVHYRN 699
Query: 362 CIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLMLNRAA 541
IPEST+GLEQYFDAP+P A +G FYF +GETYAAL ++KE KVL YE PTL+LN AA
Sbjct: 700 VIPESTSGLEQYFDAPLPTATIGTFYFANGETYAALCEYKEGKVLNYE-GFPTLILNEAA 758
Query: 542 KDGNVPCMVA 571
KD VPCMVA
Sbjct: 759 KDRKVPCMVA 768
[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
RepID=POL1_BRSV
Length = 2264
Score = 290 bits (742), Expect = 5e-77
Identities = 139/190 (73%), Positives = 159/190 (83%)
Frame = +2
Query: 2 FYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSS 181
FYT +LGV GPHYKP E DFIVSTEPLKMG+ GEHVPI+YG GVG LPTK WV+ FG+ S
Sbjct: 2020 FYTEMLGVAGPHYKPQENDFIVSTEPLKMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRPS 2079
Query: 182 SLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRN 361
LKN GYLI+P+LR Q+EAGKR++FMSPAPYVANNAALIAFG+ K+L Q+DALVHYRN
Sbjct: 2080 QLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANNAALIAFGTGGKMLIQKDALVHYRN 2139
Query: 362 CIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLMLNRAA 541
IPEST+GLEQYFDAP+P A +G FYF +GETYAAL ++KE KVL YE PTL+LN AA
Sbjct: 2140 VIPESTSGLEQYFDAPLPTATIGTFYFANGETYAALCEYKEGKVLNYE-GFPTLILNEAA 2198
Query: 542 KDGNVPCMVA 571
KD VPCMVA
Sbjct: 2199 KDRKVPCMVA 2208
[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
Length = 824
Score = 278 bits (711), Expect = 2e-73
Identities = 138/191 (72%), Positives = 158/191 (82%)
Frame = +2
Query: 2 FYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSS 181
FYT +LGV GPHYKP E DFIVS +PLK G+ GE+VPI +G G+G LPTK WV FGK S
Sbjct: 580 FYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPS 639
Query: 182 SLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRN 361
LKN+KGYLI LLREQ+EAGKR+IFM PAPYVANNAALI+FGSA K+L Q+DAL HYRN
Sbjct: 640 QLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKMLIQKDALAHYRN 699
Query: 362 CIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLMLNRAA 541
IPEST+GLEQYFDAPIPQA+VG FYF DGETY AL ++K+ KVL YE LPT +LN+AA
Sbjct: 700 VIPESTSGLEQYFDAPIPQASVGTFYFGDGETYTALCEYKDGKVLQYE-GLPTAILNQAA 758
Query: 542 KDGNVPCMVAQ 574
KD VPCMVA+
Sbjct: 759 KDRKVPCMVAR 769
[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
RepID=POL1_TBRVM
Length = 2266
Score = 278 bits (711), Expect = 2e-73
Identities = 138/191 (72%), Positives = 158/191 (82%)
Frame = +2
Query: 2 FYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSS 181
FYT +LGV GPHYKP E DFIVS +PLK G+ GE+VPI +G G+G LPTK WV FGK S
Sbjct: 2022 FYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPS 2081
Query: 182 SLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRN 361
LKN+KGYLI LLREQ+EAGKR+IFM PAPYVANNAALI+FGSA K+L Q+DAL HYRN
Sbjct: 2082 QLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKMLIQKDALAHYRN 2141
Query: 362 CIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLMLNRAA 541
IPEST+GLEQYFDAPIPQA+VG FYF DGETY AL ++K+ KVL YE LPT +LN+AA
Sbjct: 2142 VIPESTSGLEQYFDAPIPQASVGTFYFGDGETYTALCEYKDGKVLQYE-GLPTAILNQAA 2200
Query: 542 KDGNVPCMVAQ 574
KD VPCMVA+
Sbjct: 2201 KDRKVPCMVAR 2211
[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI00017F0C90
Length = 826
Score = 229 bits (584), Expect = 1e-58
Identities = 112/190 (58%), Positives = 136/190 (71%)
Frame = +2
Query: 2 FYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSS 181
FYT +LGVCGPHYKP E+DF+VST P+K G G H+PIK GGGVG LPT WV +FG+ S
Sbjct: 579 FYTPILGVCGPHYKPKEQDFLVSTLPIKQGE-GVHIPIKIGGGVGGLPTHQWVKNFGRPS 637
Query: 182 SLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRN 361
LKN GY Y LL EQ+E GKR++FMS APYVA NAALI+FGS+ K+L ++ L HYRN
Sbjct: 638 QLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNAALISFGSSRKILKEQMPLCHYRN 697
Query: 362 CIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLMLNRAA 541
IPES GL YFDAP+P A +G+ YF +GETYAAL +FK +VL +LN A
Sbjct: 698 SIPESVDGLTGYFDAPLPAATIGKSYFANGETYAALCEFKNGEVLDIVGPTNVQILNGAV 757
Query: 542 KDGNVPCMVA 571
+ G VPC+ A
Sbjct: 758 RQGKVPCLAA 767
[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=POL1_GCMV
Length = 2252
Score = 229 bits (584), Expect = 1e-58
Identities = 112/190 (58%), Positives = 136/190 (71%)
Frame = +2
Query: 2 FYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSS 181
FYT +LGVCGPHYKP E+DF+VST P+K G G H+PIK GGGVG LPT WV +FG+ S
Sbjct: 2005 FYTPILGVCGPHYKPKEQDFLVSTLPIKQGE-GVHIPIKIGGGVGGLPTHQWVKNFGRPS 2063
Query: 182 SLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRN 361
LKN GY Y LL EQ+E GKR++FMS APYVA NAALI+FGS+ K+L ++ L HYRN
Sbjct: 2064 QLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNAALISFGSSRKILKEQMPLCHYRN 2123
Query: 362 CIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLMLNRAA 541
IPES GL YFDAP+P A +G+ YF +GETYAAL +FK +VL +LN A
Sbjct: 2124 SIPESVDGLTGYFDAPLPAATIGKSYFANGETYAALCEFKNGEVLDIVGPTNVQILNGAV 2183
Query: 542 KDGNVPCMVA 571
+ G VPC+ A
Sbjct: 2184 RQGKVPCLAA 2193
[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=UPI00003FE52F
Length = 846
Score = 160 bits (405), Expect = 6e-38
Identities = 91/196 (46%), Positives = 118/196 (60%), Gaps = 6/196 (3%)
Frame = +2
Query: 2 FYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSS 181
F L V GP YKP + +VST PLK G G VP++ G G+G LPT WV F + +
Sbjct: 587 FTRQCLVVAGPFYKPTPDQLLVSTTPLKQGESGYWVPVETGMGIGNLPTIAWVHRFMRPT 646
Query: 182 SLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRN 361
L +A GY I+ +R +E+GK ++F S APYVA NAAL+AFG A KLL + AL YRN
Sbjct: 647 QLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKLLEIKTALNLYRN 706
Query: 362 CIPESTTGLEQYFDAPIPQANV-GQFYFVDGETYAALNDFKEAKVLGYEKELPTL----- 523
IPEST GLEQYFDA IPQA++ G FY + E+ + L + K V+G E L
Sbjct: 707 VIPESTYGLEQYFDAAIPQASLPGTFYLANAESESLLQEHKTGTVIGLTTEKFNLNGARD 766
Query: 524 MLNRAAKDGNVPCMVA 571
++ + K G +P M A
Sbjct: 767 LIMQGQKLGKLPVMAA 782
[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=POL1_CNSV
Length = 2336
Score = 160 bits (405), Expect = 6e-38
Identities = 91/196 (46%), Positives = 118/196 (60%), Gaps = 6/196 (3%)
Frame = +2
Query: 2 FYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSS 181
F L V GP YKP + +VST PLK G G VP++ G G+G LPT WV F + +
Sbjct: 2077 FTRQCLVVAGPFYKPTPDQLLVSTTPLKQGESGYWVPVETGMGIGNLPTIAWVHRFMRPT 2136
Query: 182 SLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRN 361
L +A GY I+ +R +E+GK ++F S APYVA NAAL+AFG A KLL + AL YRN
Sbjct: 2137 QLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKLLEIKTALNLYRN 2196
Query: 362 CIPESTTGLEQYFDAPIPQANV-GQFYFVDGETYAALNDFKEAKVLGYEKELPTL----- 523
IPEST GLEQYFDA IPQA++ G FY + E+ + L + K V+G E L
Sbjct: 2197 VIPESTYGLEQYFDAAIPQASLPGTFYLANAESESLLQEHKTGTVIGLTTEKFNLNGARD 2256
Query: 524 MLNRAAKDGNVPCMVA 571
++ + K G +P M A
Sbjct: 2257 LIMQGQKLGKLPVMAA 2272
[9][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID54_9SECO
Length = 1916
Score = 79.3 bits (194), Expect = 2e-13
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 4/132 (3%)
Frame = +2
Query: 17 LGVCGPHY--KPCEEDFIVSTEPLKMG--ILGEHVPIKYGGGVGRLPTKNWVMSFGKSSS 184
+ V GP + + C++ F+VST PL G H+P++ G G+GR+P+++WV F +
Sbjct: 1766 IAVSGPKWIIESCDKQFVVSTLPLSRAEKFSGIHIPVECGDGLGRMPSQDWVRRFRR--- 1822
Query: 185 LKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNC 364
+++ + +IY + AGK IIF APY+A A I+F A + + RD L Y N
Sbjct: 1823 IRHVQIRVIY----DAYAAGKTIIFKDVAPYIAGWTAAISFACA-QQYSYRDMLNRYNNV 1877
Query: 365 IPESTTGLEQYF 400
+++G+EQYF
Sbjct: 1878 CTPNSSGIEQYF 1889
[10][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
RepID=UPI0000163DCE
Length = 707
Score = 58.9 bits (141), Expect = 3e-07
Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Frame = +2
Query: 23 VCGPHY--KPCEEDFIVSTEPLKMGILGE--HVPIKYG-GGVGRLPTKNWVMSFGKSSSL 187
+CGP + E F+VST PL+ G H I+Y GVGRLP+++WV F S+
Sbjct: 563 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 622
Query: 188 KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCI 367
A+ +R+ +GK I F PYVAN A I F + Y++ I
Sbjct: 623 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 667
Query: 368 PESTTGLEQYFDAPIPQANVGQFYF 442
Y D +P ++ FYF
Sbjct: 668 -------NLYHDVSVPGSDALYFYF 685
[11][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
RepID=POL1_BRAV
Length = 2094
Score = 58.9 bits (141), Expect = 3e-07
Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Frame = +2
Query: 23 VCGPHY--KPCEEDFIVSTEPLKMGILGE--HVPIKYG-GGVGRLPTKNWVMSFGKSSSL 187
+CGP + E F+VST PL+ G H I+Y GVGRLP+++WV F S+
Sbjct: 1950 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 2009
Query: 188 KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCI 367
A+ +R+ +GK I F PYVAN A I F + Y++ I
Sbjct: 2010 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 2054
Query: 368 PESTTGLEQYFDAPIPQANVGQFYF 442
Y D +P ++ FYF
Sbjct: 2055 -------NLYHDVSVPGSDALYFYF 2072