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[1][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 228 bits (580), Expect = 3e-58
Identities = 109/187 (58%), Positives = 134/187 (71%), Gaps = 3/187 (1%)
Frame = +2
Query: 26 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQR 205
IQ+ +TANFG GA+FW++PLS+P AP+ VE+KFEFYIRI GID PDLC+QINY+QR
Sbjct: 284 IQAACCATANFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQR 343
Query: 206 FGWFMVRP-EGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFT 382
FGWFM+ P + T E +PSR+ N+ +K +C NF NAFAIMCATTGMHWG+CI+HFT
Sbjct: 344 FGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVNFTNAFAIMCATTGMHWGRCILHFT 403
Query: 383 WAWKHDTEASKMKGNLSFGTGMGTKDVHH--GETRVFSIYDNSYSIPFEFGSFAGPVTSG 556
W+W +TEA K +S + H R +YDN+YSIPFEFGSFAGPV SG
Sbjct: 404 WSWHRNTEAGKNAREISQSRLEWVIVLQHIILGIRGILVYDNAYSIPFEFGSFAGPVISG 463
Query: 557 GKPFEAE 577
G P EAE
Sbjct: 464 GTPNEAE 470
[2][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 225 bits (574), Expect = 2e-57
Identities = 109/191 (57%), Positives = 138/191 (72%), Gaps = 5/191 (2%)
Frame = +2
Query: 20 LKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYR 199
LKIQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY
Sbjct: 284 LKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYD 343
Query: 200 QRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCI 370
QRF WF ++RP K ++ +PSRV N+ K TN+VNAFAIMCATTGMH GKCI
Sbjct: 344 QRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCI 403
Query: 371 VHFTWAWKHDTEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGP 544
+HF+W T ++G++SF +GMG + HHGE + +S ++PFEFGSFAGP
Sbjct: 404 LHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSSSLAVPFEFGSFAGP 463
Query: 545 VTSGGKPFEAE 577
VTSGG PF +E
Sbjct: 464 VTSGGTPFTSE 474
[3][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 225 bits (574), Expect = 2e-57
Identities = 109/191 (57%), Positives = 138/191 (72%), Gaps = 5/191 (2%)
Frame = +2
Query: 20 LKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYR 199
LKIQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY
Sbjct: 1094 LKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYD 1153
Query: 200 QRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCI 370
QRF WF ++RP K ++ +PSRV N+ K TN+VNAFAIMCATTGMH GKCI
Sbjct: 1154 QRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCI 1213
Query: 371 VHFTWAWKHDTEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGP 544
+HF+W T ++G++SF +GMG + HHGE + +S ++PFEFGSFAGP
Sbjct: 1214 LHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSSSLAVPFEFGSFAGP 1273
Query: 545 VTSGGKPFEAE 577
VTSGG PF +E
Sbjct: 1274 VTSGGTPFTSE 1284
[4][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 209 bits (532), Expect = 1e-52
Identities = 99/188 (52%), Positives = 132/188 (70%), Gaps = 2/188 (1%)
Frame = +2
Query: 20 LKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYR 199
L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+YI+I GI++ P LC++INY+
Sbjct: 283 LQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYK 342
Query: 200 QRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIV 373
QRF W ++ K ++ +PSR+ NL K V+ TNFVNA AI+CATTGMH G C +
Sbjct: 343 QRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAILCATTGMHHGNCTI 402
Query: 374 HFTWAWKHDTEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAGPVTS 553
HF+W W H E K G L F GMG + H G+T ++ N++S+PF+FGSFAGP+TS
Sbjct: 403 HFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHSVPFQFGSFAGPITS 461
Query: 554 GGKPFEAE 577
GGK EAE
Sbjct: 462 GGKADEAE 469
[5][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 209 bits (532), Expect = 1e-52
Identities = 99/188 (52%), Positives = 132/188 (70%), Gaps = 2/188 (1%)
Frame = +2
Query: 20 LKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYR 199
L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+YI+I GI++ P LC++INY+
Sbjct: 1120 LQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYK 1179
Query: 200 QRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIV 373
QRF W ++ K ++ +PSR+ NL K V+ TNFVNA AI+CATTGMH G C +
Sbjct: 1180 QRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAILCATTGMHHGNCTI 1239
Query: 374 HFTWAWKHDTEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAGPVTS 553
HF+W W H E K G L F GMG + H G+T ++ N++S+PF+FGSFAGP+TS
Sbjct: 1240 HFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHSVPFQFGSFAGPITS 1298
Query: 554 GGKPFEAE 577
GGK EAE
Sbjct: 1299 GGKADEAE 1306
[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 193 bits (491), Expect = 7e-48
Identities = 92/190 (48%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Frame = +2
Query: 20 LKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYR 199
L+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHGI+++ LC++INY
Sbjct: 1116 LQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGFQYYIHIHGINAKAHLCREINYN 1175
Query: 200 QRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIV 373
Q F WFM+ T + +P+R++NL K V+ TNFVNA AIMCATTGMH+GKC +
Sbjct: 1176 QHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVTNFVNALAIMCATTGMHFGKCTL 1235
Query: 374 HFTWAWKHDTEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPV 547
HF+W W + + + G +S TGMG V H G F S+S+PF+FGSFAGP+
Sbjct: 1236 HFSWGW-YRGKLADQSGAVSLQTGMGRAAVAEHFGGKHNFCYPATSFSLPFQFGSFAGPI 1294
Query: 548 TSGGKPFEAE 577
+ GG P AE
Sbjct: 1295 SCGGAPMAAE 1304
[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 191 bits (485), Expect = 3e-47
Identities = 92/190 (48%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Frame = +2
Query: 20 LKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYR 199
L+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHGI + +LC++INY
Sbjct: 283 LQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYN 342
Query: 200 QRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIV 373
Q F WFM+ T + +P+R++NL K V+ TNFVNA AIMCATTGMH+GKC +
Sbjct: 343 QHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNALAIMCATTGMHFGKCTL 402
Query: 374 HFTWAWKHDTEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPV 547
HF+W W A + G S TGMG V H G F+ ++S+PF+FGSFAGP+
Sbjct: 403 HFSWNWFRGKLADQ-SGVFSIQTGMGKSTVAEHFGGRHSFNYPATNFSLPFQFGSFAGPI 461
Query: 548 TSGGKPFEAE 577
+ GG+P AE
Sbjct: 462 SCGGEPMAAE 471
[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 191 bits (485), Expect = 3e-47
Identities = 92/190 (48%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Frame = +2
Query: 20 LKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYR 199
L+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHGI + +LC++INY
Sbjct: 1115 LQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYN 1174
Query: 200 QRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIV 373
Q F WFM+ T + +P+R++NL K V+ TNFVNA AIMCATTGMH+GKC +
Sbjct: 1175 QHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNALAIMCATTGMHFGKCTL 1234
Query: 374 HFTWAWKHDTEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPV 547
HF+W W A + G S TGMG V H G F+ ++S+PF+FGSFAGP+
Sbjct: 1235 HFSWNWFRGKLADQ-SGVFSIQTGMGKSTVAEHFGGRHSFNYPATNFSLPFQFGSFAGPI 1293
Query: 548 TSGGKPFEAE 577
+ GG+P AE
Sbjct: 1294 SCGGEPMAAE 1303
[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 189 bits (479), Expect = 2e-46
Identities = 99/193 (51%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Frame = +2
Query: 5 GGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
G + LKIQSPFY+TAN G A FWV P+SSPMAPE +ES E+YI+I GI++ LC+
Sbjct: 103 GVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCR 162
Query: 185 QINYRQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWG 361
INY+Q FGWF +VR T+KE + +PSR++N+ K E N VNAF+IMCATTGM WG
Sbjct: 163 AINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAFSIMCATTGMQWG 222
Query: 362 K-CIVHFTWAWKHDTEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFA 538
+H H T+A K S G+ T+ H G+ ++ + S IPFE GSFA
Sbjct: 223 SPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLATSQVIPFEIGSFA 277
Query: 539 GPVTSGGKPFEAE 577
GPVTSGG PFE+E
Sbjct: 278 GPVTSGGTPFESE 290
[10][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 189 bits (479), Expect = 2e-46
Identities = 99/193 (51%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Frame = +2
Query: 5 GGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
G + LKIQSPFY+TAN G A FWV P+SSPMAPE +ES E+YI+I GI++ LC+
Sbjct: 1123 GVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCR 1182
Query: 185 QINYRQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWG 361
INY+Q FGWF +VR T+KE + +PSR++N+ K E N VNAF+IMCATTGM WG
Sbjct: 1183 AINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAFSIMCATTGMQWG 1242
Query: 362 K-CIVHFTWAWKHDTEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFA 538
+H H T+A K S G+ T+ H G+ ++ + S IPFE GSFA
Sbjct: 1243 SPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLATSQVIPFEIGSFA 1297
Query: 539 GPVTSGGKPFEAE 577
GPVTSGG PFE+E
Sbjct: 1298 GPVTSGGTPFESE 1310
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 121 bits (303), Expect = 4e-26
Identities = 60/182 (32%), Positives = 102/182 (56%), Gaps = 2/182 (1%)
Frame = +2
Query: 5 GGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
G + +L I+ FY+++ +G GA + L SPM+P +++ F+ +I G +C+
Sbjct: 290 GVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPFDMVFKIKGFTPDAPMCR 349
Query: 185 QINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGK 364
IN+ QRFGWF V P + ++ + ++L + ++ T + NAF MC T+ MH+G
Sbjct: 350 TINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGS 409
Query: 365 CIVHFTWA-WKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFA 538
I+HF+W + T A+ G ++ G G ++ + G R FSIY+ ++P E G+FA
Sbjct: 410 VIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNFSIYEGKATVPLELGTFA 469
Query: 539 GP 544
GP
Sbjct: 470 GP 471
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 119 bits (298), Expect = 2e-25
Identities = 60/182 (32%), Positives = 101/182 (55%), Gaps = 2/182 (1%)
Frame = +2
Query: 5 GGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
G + +L I+ FY+++ +G GA V L SPM+P +++ F+ +I G +C+
Sbjct: 278 GVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCR 337
Query: 185 QINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGK 364
IN+ QRFGWF V P + ++ + ++L + ++ T + NAF MC T+ MH+G
Sbjct: 338 TINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGS 397
Query: 365 CIVHFTWA-WKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFA 538
I+HF+W + T A+ G ++ G G ++ + G R SIY+ ++P E G+FA
Sbjct: 398 VIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPLELGTFA 457
Query: 539 GP 544
GP
Sbjct: 458 GP 459
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 119 bits (298), Expect = 2e-25
Identities = 60/182 (32%), Positives = 101/182 (55%), Gaps = 2/182 (1%)
Frame = +2
Query: 5 GGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
G + +L I+ FY+++ +G GA V L SPM+P +++ F+ +I G +C+
Sbjct: 961 GVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCR 1020
Query: 185 QINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGK 364
IN+ QRFGWF V P + ++ + ++L + ++ T + NAF MC T+ MH+G
Sbjct: 1021 TINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGS 1080
Query: 365 CIVHFTWA-WKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFA 538
I+HF+W + T A+ G ++ G G ++ + G R SIY+ ++P E G+FA
Sbjct: 1081 VIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPLELGTFA 1140
Query: 539 GP 544
GP
Sbjct: 1141 GP 1142
[14][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 65.5 bits (158), Expect = 3e-09
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 5/188 (2%)
Frame = +2
Query: 8 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
G E+ I++ F+S A + ++PLS P+AP+ +EF + I+ DSQ P
Sbjct: 290 GQFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPP 349
Query: 176 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMH 355
+ F ++P+ +P + + K T N + + A TG H
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 409
Query: 356 WGKCIVHFTWAWKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
+G+ V +W +A +G++S T + G+ R++ + IP GS
Sbjct: 410 YGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 467
Query: 533 FAGPVTSG 556
+AG SG
Sbjct: 468 YAGATPSG 475
[15][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 63.2 bits (152), Expect = 1e-08
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Frame = +2
Query: 8 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 181
G E+ I++ +S A + ++PLS P+AP+ +EF + I+ DSQ
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348
Query: 182 KQINYRQRFGWFM---VRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGM 352
+ + + WF ++P+ +P + + K T N + + A TG
Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGW 408
Query: 353 HWGKCIVHFTWAWKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFG 529
H+G+ V +W +A +G++S T + G+ R++ + IP G
Sbjct: 409 HYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLG 466
Query: 530 SFAGPVTSG 556
S+AG SG
Sbjct: 467 SYAGATPSG 475
[16][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 62.4 bits (150), Expect = 2e-08
Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
Frame = +2
Query: 8 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349
Query: 176 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMH 355
+ F ++P+ +P + + K T N + + A TG H
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 409
Query: 356 WGKCIVHFTWAWKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
+G+ V +W +A +G++S T + G+ R++ + IP GS
Sbjct: 410 YGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 467
Query: 533 FAGPVTSG 556
+AG SG
Sbjct: 468 YAGATPSG 475
[17][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 62.0 bits (149), Expect = 3e-08
Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
Frame = +2
Query: 8 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 347
Query: 176 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMH 355
+ F ++P+ +P + + K T N + + A TG H
Sbjct: 348 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 407
Query: 356 WGKCIVHFTWAWKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
+G+ V +W +A +G++S T + G+ R++ + IP GS
Sbjct: 408 YGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 465
Query: 533 FAGPVTSG 556
+AG SG
Sbjct: 466 YAGATPSG 473
[18][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 62.0 bits (149), Expect = 3e-08
Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
Frame = +2
Query: 8 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 935
Query: 176 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMH 355
+ F ++P+ +P + + K T N + + A TG H
Sbjct: 936 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 995
Query: 356 WGKCIVHFTWAWKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
+G+ V +W +A +G++S T + G+ R++ + IP GS
Sbjct: 996 YGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 1053
Query: 533 FAGPVTSG 556
+AG SG
Sbjct: 1054 YAGATPSG 1061
[19][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 59.7 bits (143), Expect = 2e-07
Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
Frame = +2
Query: 8 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
G E+ ++ +S++ + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349
Query: 176 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMH 355
+ F ++P+ +P + + K T N + + A TG H
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 409
Query: 356 WGKCIVHFTWAWKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
+G+ V +W +A +G++S T + G+ R++ + IP GS
Sbjct: 410 YGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 467
Query: 533 FAGPVTSG 556
+AG SG
Sbjct: 468 YAGATPSG 475
[20][TOP]
>UniRef100_UPI0000164A21 capsid protein n=1 Tax=Tomato ringspot virus RepID=UPI0000164A21
Length = 562
Score = 54.3 bits (129), Expect = 7e-06
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Frame = +2
Query: 8 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQ 187
G+ L I +P +T+ F + + + ++ P +P+ ++K++F I+ + +
Sbjct: 289 GAFSLPISTPHAATS-FLEDMLRLEIFAIAGPFSPKDNKAKYQFMCYFDHIELVEGVPRT 347
Query: 188 INYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKC 367
I Q+F W R D +++ P+R+ +++ E + +++ ++TG G+
Sbjct: 348 IAGEQQFNWCSFRNFKID-DWKFEWPARLPDILDDKSEVLLRQHPLSLLISSTGFFTGRA 406
Query: 368 IVHFTWAWKHDTEASKMKGNLS--FGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAG 541
I F + W +T A MKG+ S G G +++ T + IP EF ++ G
Sbjct: 407 I--FVFQWGLNTTAGNMKGSFSARLAFGKGVEEIEQTSTVQPLVGACEARIPVEFKTYTG 464
Query: 542 PVTSG 556
TSG
Sbjct: 465 YTTSG 469
[21][TOP]
>UniRef100_A3FEN2 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=A3FEN2_9SECO
Length = 562
Score = 54.3 bits (129), Expect = 7e-06
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Frame = +2
Query: 8 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQ 187
G+ L I +P +T+ F + + + ++ P +P+ ++K++F I+ + +
Sbjct: 289 GAFSLPISTPHAATS-FLEDMLRLEIFAIAGPFSPKDNKAKYQFMCYFDHIELVEGVPRT 347
Query: 188 INYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKC 367
I Q+F W R D +++ P+R+ +++ E + +++ ++TG G+
Sbjct: 348 IAGEQQFNWCSFRNFKID-DWRFEWPARLPDILDDKSEVLLRQHPLSLLISSTGFFTGRA 406
Query: 368 IVHFTWAWKHDTEASKMKGNLS--FGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAG 541
I F + W +T A MKG+ S G G +++ T + IP EF ++ G
Sbjct: 407 I--FVFQWGLNTTAGNMKGSFSARLAFGKGVEEIEQTSTVQPLVGACEARIPVEFKTYTG 464
Query: 542 PVTSG 556
TSG
Sbjct: 465 YTTSG 469
[22][TOP]
>UniRef100_P25247 Coat protein n=2 Tax=Tomato ringspot virus RepID=POL2_TORVR
Length = 1882
Score = 54.3 bits (129), Expect = 7e-06
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Frame = +2
Query: 8 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQ 187
G+ L I +P +T+ F + + + ++ P +P+ ++K++F I+ + +
Sbjct: 1609 GAFSLPISTPHAATS-FLEDMLRLEIFAIAGPFSPKDNKAKYQFMCYFDHIELVEGVPRT 1667
Query: 188 INYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKC 367
I Q+F W R D +++ P+R+ +++ E + +++ ++TG G+
Sbjct: 1668 IAGEQQFNWCSFRNFKID-DWKFEWPARLPDILDDKSEVLLRQHPLSLLISSTGFFTGRA 1726
Query: 368 IVHFTWAWKHDTEASKMKGNLS--FGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAG 541
I F + W +T A MKG+ S G G +++ T + IP EF ++ G
Sbjct: 1727 I--FVFQWGLNTTAGNMKGSFSARLAFGKGVEEIEQTSTVQPLVGACEARIPVEFKTYTG 1784
Query: 542 PVTSG 556
TSG
Sbjct: 1785 YTTSG 1789
[23][TOP]
>UniRef100_Q9YPA2 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=Q9YPA2_9SECO
Length = 564
Score = 53.9 bits (128), Expect = 9e-06
Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Frame = +2
Query: 8 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQ 187
G+ L I +P +T+ F + + + ++ P +P+ ++ ++F I+S + +
Sbjct: 291 GAFSLPISTPHEATS-FVEDMLRLEIFAIAGPFSPKDNKATYQFMCYFDHIESVEGVPRT 349
Query: 188 INYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKC 367
I Q+F W + D +++ P+R+ +++ E + +++ ++TG G+
Sbjct: 350 IAGEQQFNWCSLTNSTID-DWRFEWPARLPDILDDKSEVLLRQHPLSLLISSTGFFTGRA 408
Query: 368 IVHFTWAWKHDTEASKMKGNLS--FGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAG 541
I F + W +T A MKG+ S G G +++ T + IP EF ++ G
Sbjct: 409 I--FVFQWGVNTTAGNMKGSFSARLAFGKGVEEIDQTSTVQPLVGACEARIPVEFKTYTG 466
Query: 542 PVTSG 556
TSG
Sbjct: 467 YTTSG 471
[24][TOP]
>UniRef100_Q9QRA3 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=Q9QRA3_9SECO
Length = 562
Score = 53.9 bits (128), Expect = 9e-06
Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Frame = +2
Query: 8 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQ 187
G+ L I +P +T+ F + + + ++ P +P+ +K++F I+ + +
Sbjct: 289 GAFSLPISTPHAATS-FLEDMLRLEIFAIAGPFSPKDNNAKYQFMCYFDHIELVEGVPRT 347
Query: 188 INYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKC 367
I Q+F W R D +++ P+R+ +++ E + +++ ++TG G+
Sbjct: 348 IAGEQQFNWCSFRNFKID-DWRFEWPARLPDILDDKSEVLLRQHPLSLLISSTGFFTGRA 406
Query: 368 IVHFTWAWKHDTEASKMKGNLS--FGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAG 541
I F + W +T A MKG+ S G G +++ T + IP EF ++ G
Sbjct: 407 I--FVFQWGLNTTAGNMKGSFSARLAFGKGVEEIEQTSTVQPLVGACEARIPVEFKTYTG 464
Query: 542 PVTSG 556
TSG
Sbjct: 465 YTTSG 469