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[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
RepID=UPI0000163E03
Length = 824
Score = 262 bits (669), Expect = 2e-68
Identities = 125/186 (67%), Positives = 146/186 (78%)
Frame = +2
Query: 20 EHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYV 199
EHVPI+YG GVG LPTK WV+ FG+ S LKN GYLI+P+LR Q+EAGKR++FMSPAPYV
Sbjct: 613 EHVPIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYV 672
Query: 200 ANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETY 379
ANNAALIAFG+ K+L Q+DALVHYRN IPEST+GLEQYFDAP+P A +G FYF +GETY
Sbjct: 673 ANNAALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYFANGETY 732
Query: 380 AALNDFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRYAVYLACDNKMCPHHHT 559
AAL ++KE KVL YE PTL+LN AAKD VPCMVA ++ V LACD+ MCPHH
Sbjct: 733 AALCEYKEGKVLNYE-GFPTLILNEAAKDRKVPCMVATQAKTKFKVSLACDSTMCPHHTA 791
Query: 560 TASNYE 577
YE
Sbjct: 792 VCETYE 797
[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
RepID=POL1_BRSV
Length = 2264
Score = 262 bits (669), Expect = 2e-68
Identities = 125/186 (67%), Positives = 146/186 (78%)
Frame = +2
Query: 20 EHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYV 199
EHVPI+YG GVG LPTK WV+ FG+ S LKN GYLI+P+LR Q+EAGKR++FMSPAPYV
Sbjct: 2053 EHVPIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYV 2112
Query: 200 ANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETY 379
ANNAALIAFG+ K+L Q+DALVHYRN IPEST+GLEQYFDAP+P A +G FYF +GETY
Sbjct: 2113 ANNAALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYFANGETY 2172
Query: 380 AALNDFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRYAVYLACDNKMCPHHHT 559
AAL ++KE KVL YE PTL+LN AAKD VPCMVA ++ V LACD+ MCPHH
Sbjct: 2173 AALCEYKEGKVLNYE-GFPTLILNEAAKDRKVPCMVATQAKTKFKVSLACDSTMCPHHTA 2231
Query: 560 TASNYE 577
YE
Sbjct: 2232 VCETYE 2237
[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
Length = 824
Score = 261 bits (666), Expect = 4e-68
Identities = 127/186 (68%), Positives = 150/186 (80%)
Frame = +2
Query: 20 EHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYV 199
E+VPI +G G+G LPTK WV FGK S LKN+KGYLI LLREQ+EAGKR+IFM PAPYV
Sbjct: 613 EYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYV 672
Query: 200 ANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETY 379
ANNAALI+FGSA K+L Q+DAL HYRN IPEST+GLEQYFDAPIPQA+VG FYF DGETY
Sbjct: 673 ANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYFGDGETY 732
Query: 380 AALNDFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRYAVYLACDNKMCPHHHT 559
AL ++K+ KVL YE LPT +LN+AAKD VPCMVA+ ++ V +ACD+ MCPHH
Sbjct: 733 TALCEYKDGKVLQYE-GLPTAILNQAAKDRKVPCMVARQWKSKFTVRMACDSNMCPHHSA 791
Query: 560 TASNYE 577
T +N+E
Sbjct: 792 TCANFE 797
[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
RepID=POL1_TBRVM
Length = 2266
Score = 261 bits (666), Expect = 4e-68
Identities = 127/186 (68%), Positives = 150/186 (80%)
Frame = +2
Query: 20 EHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYV 199
E+VPI +G G+G LPTK WV FGK S LKN+KGYLI LLREQ+EAGKR+IFM PAPYV
Sbjct: 2055 EYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYV 2114
Query: 200 ANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETY 379
ANNAALI+FGSA K+L Q+DAL HYRN IPEST+GLEQYFDAPIPQA+VG FYF DGETY
Sbjct: 2115 ANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYFGDGETY 2174
Query: 380 AALNDFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRYAVYLACDNKMCPHHHT 559
AL ++K+ KVL YE LPT +LN+AAKD VPCMVA+ ++ V +ACD+ MCPHH
Sbjct: 2175 TALCEYKDGKVLQYE-GLPTAILNQAAKDRKVPCMVARQWKSKFTVRMACDSNMCPHHSA 2233
Query: 560 TASNYE 577
T +N+E
Sbjct: 2234 TCANFE 2239
[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI00017F0C90
Length = 826
Score = 212 bits (540), Expect = 1e-53
Identities = 101/185 (54%), Positives = 125/185 (67%)
Frame = +2
Query: 23 HVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVA 202
H+PIK GGGVG LPT WV +FG+ S LKN GY Y LL EQ+E GKR++FMS APYVA
Sbjct: 612 HIPIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVA 671
Query: 203 NNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYA 382
NAALI+FGS+ K+L ++ L HYRN IPES GL YFDAP+P A +G+ YF +GETYA
Sbjct: 672 GNAALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGETYA 731
Query: 383 ALNDFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRYAVYLACDNKMCPHHHTT 562
AL +FK +VL +LN A + G VPC+ A G ++ V L C+ MCPHHH T
Sbjct: 732 ALCEFKNGEVLDIVGPTNVQILNGAVRQGKVPCLAAHSVGTKFKVSLVCNKTMCPHHHHT 791
Query: 563 ASNYE 577
+E
Sbjct: 792 GPTFE 796
[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=POL1_GCMV
Length = 2252
Score = 212 bits (540), Expect = 1e-53
Identities = 101/185 (54%), Positives = 125/185 (67%)
Frame = +2
Query: 23 HVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVA 202
H+PIK GGGVG LPT WV +FG+ S LKN GY Y LL EQ+E GKR++FMS APYVA
Sbjct: 2038 HIPIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVA 2097
Query: 203 NNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYA 382
NAALI+FGS+ K+L ++ L HYRN IPES GL YFDAP+P A +G+ YF +GETYA
Sbjct: 2098 GNAALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGETYA 2157
Query: 383 ALNDFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRYAVYLACDNKMCPHHHTT 562
AL +FK +VL +LN A + G VPC+ A G ++ V L C+ MCPHHH T
Sbjct: 2158 ALCEFKNGEVLDIVGPTNVQILNGAVRQGKVPCLAAHSVGTKFKVSLVCNKTMCPHHHHT 2217
Query: 563 ASNYE 577
+E
Sbjct: 2218 GPTFE 2222
[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=UPI00003FE52F
Length = 846
Score = 149 bits (376), Expect = 2e-34
Identities = 84/193 (43%), Positives = 114/193 (59%), Gaps = 6/193 (3%)
Frame = +2
Query: 11 ES*EHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPA 190
ES VP++ G G+G LPT WV F + + L +A GY I+ +R +E+GK ++F S A
Sbjct: 617 ESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFRSEA 676
Query: 191 PYVANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANV-GQFYFVD 367
PYVA NAAL+AFG A KLL + AL YRN IPEST GLEQYFDA IPQA++ G FY +
Sbjct: 677 PYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFYLAN 736
Query: 368 GETYAALNDFKEAKVLGYEKELPTL-----MLNRAAKDGNVPCMVAQMKGKRYAVYLACD 532
E+ + L + K V+G E L ++ + K G +P M A ++ V L C
Sbjct: 737 AESESLLQEHKTGTVIGLTTEKFNLNGARDLIMQGQKLGKLPVMAATQAPNKFYVGLCCQ 796
Query: 533 NKMCPHHHTTASN 571
CP H T++ +
Sbjct: 797 KNFCPGHATSSDS 809
[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=POL1_CNSV
Length = 2336
Score = 149 bits (376), Expect = 2e-34
Identities = 84/193 (43%), Positives = 114/193 (59%), Gaps = 6/193 (3%)
Frame = +2
Query: 11 ES*EHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPA 190
ES VP++ G G+G LPT WV F + + L +A GY I+ +R +E+GK ++F S A
Sbjct: 2107 ESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFRSEA 2166
Query: 191 PYVANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANV-GQFYFVD 367
PYVA NAAL+AFG A KLL + AL YRN IPEST GLEQYFDA IPQA++ G FY +
Sbjct: 2167 PYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFYLAN 2226
Query: 368 GETYAALNDFKEAKVLGYEKELPTL-----MLNRAAKDGNVPCMVAQMKGKRYAVYLACD 532
E+ + L + K V+G E L ++ + K G +P M A ++ V L C
Sbjct: 2227 AESESLLQEHKTGTVIGLTTEKFNLNGARDLIMQGQKLGKLPVMAATQAPNKFYVGLCCQ 2286
Query: 533 NKMCPHHHTTASN 571
CP H T++ +
Sbjct: 2287 KNFCPGHATSSDS 2299
[9][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID54_9SECO
Length = 1916
Score = 65.9 bits (159), Expect = 2e-09
Identities = 36/99 (36%), Positives = 59/99 (59%)
Frame = +2
Query: 23 HVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVA 202
H+P++ G G+GR+P+++WV F + +++ + +IY + AGK IIF APY+A
Sbjct: 1799 HIPVECGDGLGRMPSQDWVRRFRR---IRHVQIRVIY----DAYAAGKTIIFKDVAPYIA 1851
Query: 203 NNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYF 319
A I+F A + + RD L Y N +++G+EQYF
Sbjct: 1852 GWTAAISFACA-QQYSYRDMLNRYNNVCTPNSSGIEQYF 1889