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[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
RepID=UPI0000163E03
Length = 824
Score = 315 bits (808), Expect = 1e-84
Identities = 147/192 (76%), Positives = 168/192 (87%)
Frame = +3
Query: 3 GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
GML++DPA VLDHMSG+DFKKFMHVSEQGNKAHFYT +LGV GPHYKP E DFIVSTEPL
Sbjct: 547 GMLKYDPAKVLDHMSGLDFKKFMHVSEQGNKAHFYTEMLGVAGPHYKPQENDFIVSTEPL 606
Query: 183 KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
KMG+ GEHVPI+YG GVG LPTK WV+ FG+ S LKN GYLI+P+LR Q+EAGKR++FM
Sbjct: 607 KMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFM 666
Query: 363 SPAPYVANNAALIAFGSAMKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYF 542
SPAPYVANNAALIAFG+ K+L Q+DALVHYRN IPEST+GLEQYFDAP+P A IG FYF
Sbjct: 667 SPAPYVANNAALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYF 726
Query: 543 VDGETYAALNDF 578
+GETYAAL ++
Sbjct: 727 ANGETYAALCEY 738
[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
RepID=POL1_BRSV
Length = 2264
Score = 315 bits (808), Expect = 1e-84
Identities = 147/192 (76%), Positives = 168/192 (87%)
Frame = +3
Query: 3 GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
GML++DPA VLDHMSG+DFKKFMHVSEQGNKAHFYT +LGV GPHYKP E DFIVSTEPL
Sbjct: 1987 GMLKYDPAKVLDHMSGLDFKKFMHVSEQGNKAHFYTEMLGVAGPHYKPQENDFIVSTEPL 2046
Query: 183 KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
KMG+ GEHVPI+YG GVG LPTK WV+ FG+ S LKN GYLI+P+LR Q+EAGKR++FM
Sbjct: 2047 KMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFM 2106
Query: 363 SPAPYVANNAALIAFGSAMKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYF 542
SPAPYVANNAALIAFG+ K+L Q+DALVHYRN IPEST+GLEQYFDAP+P A IG FYF
Sbjct: 2107 SPAPYVANNAALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYF 2166
Query: 543 VDGETYAALNDF 578
+GETYAAL ++
Sbjct: 2167 ANGETYAALCEY 2178
[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
Length = 824
Score = 300 bits (768), Expect = 5e-80
Identities = 143/192 (74%), Positives = 164/192 (85%)
Frame = +3
Query: 3 GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
GM ++DPA VLDHMSGVDFK+FMH+SEQGNKAHFYT +LGV GPHYKP E DFIVS +PL
Sbjct: 547 GMQKYDPAVVLDHMSGVDFKRFMHMSEQGNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPL 606
Query: 183 KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
K G+ GE+VPI +G G+G LPTK WV FGK S LKN+KGYLI LLREQ+EAGKR+IFM
Sbjct: 607 KPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFM 666
Query: 363 SPAPYVANNAALIAFGSAMKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYF 542
PAPYVANNAALI+FGSA K+L Q+DAL HYRN IPEST+GLEQYFDAPIPQA++G FYF
Sbjct: 667 GPAPYVANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYF 726
Query: 543 VDGETYAALNDF 578
DGETY AL ++
Sbjct: 727 GDGETYTALCEY 738
[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
RepID=POL1_TBRVM
Length = 2266
Score = 300 bits (768), Expect = 5e-80
Identities = 143/192 (74%), Positives = 164/192 (85%)
Frame = +3
Query: 3 GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
GM ++DPA VLDHMSGVDFK+FMH+SEQGNKAHFYT +LGV GPHYKP E DFIVS +PL
Sbjct: 1989 GMQKYDPAVVLDHMSGVDFKRFMHMSEQGNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPL 2048
Query: 183 KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
K G+ GE+VPI +G G+G LPTK WV FGK S LKN+KGYLI LLREQ+EAGKR+IFM
Sbjct: 2049 KPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFM 2108
Query: 363 SPAPYVANNAALIAFGSAMKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYF 542
PAPYVANNAALI+FGSA K+L Q+DAL HYRN IPEST+GLEQYFDAPIPQA++G FYF
Sbjct: 2109 GPAPYVANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYF 2168
Query: 543 VDGETYAALNDF 578
DGETY AL ++
Sbjct: 2169 GDGETYTALCEY 2180
[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI00017F0C90
Length = 826
Score = 254 bits (649), Expect = 3e-66
Identities = 121/192 (63%), Positives = 147/192 (76%)
Frame = +3
Query: 3 GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
GMLRHDPA +LD ++G +F +FM S +G+KAHFYT +LGVCGPHYKP E+DF+VST P+
Sbjct: 546 GMLRHDPAKILDSLAGPEFPRFMRCSGEGDKAHFYTPILGVCGPHYKPKEQDFLVSTLPI 605
Query: 183 KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
K G G H+PIK GGGVG LPT WV +FG+ S LKN GY Y LL EQ+E GKR++FM
Sbjct: 606 KQGE-GVHIPIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFM 664
Query: 363 SPAPYVANNAALIAFGSAMKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYF 542
S APYVA NAALI+FGS+ K+L ++ L HYRN IPES GL YFDAP+P A IG+ YF
Sbjct: 665 SAAPYVAGNAALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYF 724
Query: 543 VDGETYAALNDF 578
+GETYAAL +F
Sbjct: 725 ANGETYAALCEF 736
[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=POL1_GCMV
Length = 2252
Score = 254 bits (649), Expect = 3e-66
Identities = 121/192 (63%), Positives = 147/192 (76%)
Frame = +3
Query: 3 GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
GMLRHDPA +LD ++G +F +FM S +G+KAHFYT +LGVCGPHYKP E+DF+VST P+
Sbjct: 1972 GMLRHDPAKILDSLAGPEFPRFMRCSGEGDKAHFYTPILGVCGPHYKPKEQDFLVSTLPI 2031
Query: 183 KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
K G G H+PIK GGGVG LPT WV +FG+ S LKN GY Y LL EQ+E GKR++FM
Sbjct: 2032 KQGE-GVHIPIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFM 2090
Query: 363 SPAPYVANNAALIAFGSAMKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYF 542
S APYVA NAALI+FGS+ K+L ++ L HYRN IPES GL YFDAP+P A IG+ YF
Sbjct: 2091 SAAPYVAGNAALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYF 2150
Query: 543 VDGETYAALNDF 578
+GETYAAL +F
Sbjct: 2151 ANGETYAALCEF 2162
[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=UPI00003FE52F
Length = 846
Score = 180 bits (457), Expect = 6e-44
Identities = 95/192 (49%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
GM + PA +D G +F +FMH S+ GN+ HF L V GP YKP + +VST PL
Sbjct: 554 GMEAYQPAKEIDLDVGQEFARFMHTSDIGNQVHFTRQCLVVAGPFYKPTPDQLLVSTTPL 613
Query: 183 KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
K G G VP++ G G+G LPT WV F + + L +A GY I+ +R +E+GK ++F
Sbjct: 614 KQGESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFR 673
Query: 363 SPAPYVANNAALIAFGSAMKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANI-GQFY 539
S APYVA NAAL+AFG A KLL + AL YRN IPEST GLEQYFDA IPQA++ G FY
Sbjct: 674 SEAPYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFY 733
Query: 540 FVDGETYAALND 575
+ E+ + L +
Sbjct: 734 LANAESESLLQE 745
[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=POL1_CNSV
Length = 2336
Score = 180 bits (457), Expect = 6e-44
Identities = 95/192 (49%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
GM + PA +D G +F +FMH S+ GN+ HF L V GP YKP + +VST PL
Sbjct: 2044 GMEAYQPAKEIDLDVGQEFARFMHTSDIGNQVHFTRQCLVVAGPFYKPTPDQLLVSTTPL 2103
Query: 183 KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
K G G VP++ G G+G LPT WV F + + L +A GY I+ +R +E+GK ++F
Sbjct: 2104 KQGESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFR 2163
Query: 363 SPAPYVANNAALIAFGSAMKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANI-GQFY 539
S APYVA NAAL+AFG A KLL + AL YRN IPEST GLEQYFDA IPQA++ G FY
Sbjct: 2164 SEAPYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFY 2223
Query: 540 FVDGETYAALND 575
+ E+ + L +
Sbjct: 2224 LANAESESLLQE 2235
[9][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID54_9SECO
Length = 1916
Score = 80.5 bits (197), Expect = 9e-14
Identities = 53/172 (30%), Positives = 93/172 (54%), Gaps = 6/172 (3%)
Frame = +3
Query: 3 GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAH--FYTSVLGVCGPHY--KPCEEDFIVS 170
G + + P + ++ + + K M ++ G + H + + V GP + + C++ F+VS
Sbjct: 1727 GAMPYRPQASMELLVDMHTDKKM-MANHGEQDHLIYVQPRIAVSGPKWIIESCDKQFVVS 1785
Query: 171 TEPLKMG--ILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAG 344
T PL G H+P++ G G+GR+P+++WV F + +++ + +IY + AG
Sbjct: 1786 TLPLSRAEKFSGIHIPVECGDGLGRMPSQDWVRRFRR---IRHVQIRVIY----DAYAAG 1838
Query: 345 KRIIFMSPAPYVANNAALIAFGSAMKLLNQRDALVHYRNCIPESTTGLEQYF 500
K IIF APY+A A I+F A + + RD L Y N +++G+EQYF
Sbjct: 1839 KTIIFKDVAPYIAGWTAAISFACAQQ-YSYRDMLNRYNNVCTPNSSGIEQYF 1889
[10][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
RepID=UPI0000163DCE
Length = 707
Score = 58.5 bits (140), Expect = 4e-07
Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Frame = +3
Query: 123 VCGPHY--KPCEEDFIVSTEPLKMGILGE--HVPIKYG-GGVGRLPTKNWVMSFGKSSSL 287
+CGP + E F+VST PL+ G H I+Y GVGRLP+++WV F S+
Sbjct: 563 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 622
Query: 288 KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAMKLLNQRDALVHYRNCI 467
A+ +R+ +GK I F PYVAN A I F + Y++ I
Sbjct: 623 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 667
Query: 468 PESTTGLEQYFDAPIPQANIGQFYF 542
Y D +P ++ FYF
Sbjct: 668 -------NLYHDVSVPGSDALYFYF 685
[11][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
RepID=POL1_BRAV
Length = 2094
Score = 58.5 bits (140), Expect = 4e-07
Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Frame = +3
Query: 123 VCGPHY--KPCEEDFIVSTEPLKMGILGE--HVPIKYG-GGVGRLPTKNWVMSFGKSSSL 287
+CGP + E F+VST PL+ G H I+Y GVGRLP+++WV F S+
Sbjct: 1950 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 2009
Query: 288 KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAMKLLNQRDALVHYRNCI 467
A+ +R+ +GK I F PYVAN A I F + Y++ I
Sbjct: 2010 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 2054
Query: 468 PESTTGLEQYFDAPIPQANIGQFYF 542
Y D +P ++ FYF
Sbjct: 2055 -------NLYHDVSVPGSDALYFYF 2072