[UP]
[1][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 207 bits (526), Expect = 6e-52
Identities = 102/197 (51%), Positives = 132/197 (67%), Gaps = 5/197 (2%)
Frame = +3
Query: 3 TPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 182
T T+ Q QMPH D L+IQSPFY+TANFG GA+FWV P+SSPMAPE +ESK
Sbjct: 262 TITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKL 321
Query: 183 EFYIRIHGIDSQPDLCKQINYKQRFGWFMV--KPEGK-DKEFQMFVPSRVSNLVIKGVDC 353
E+YI+I GID+ P +C+QINY QRF WF + P+ K K ++ +PSRV N+ K
Sbjct: 322 EYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATV 381
Query: 354 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGET 527
TN+VNAFAIMCATTGMH GKCI+HF+W ++G++SF +GMG + HHGE
Sbjct: 382 TNYVNAFAIMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEF 441
Query: 528 RVFSIYDNSYSIPFEFG 578
+ +S ++PFEFG
Sbjct: 442 HLGGPLSSSLAVPFEFG 458
[2][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 207 bits (526), Expect = 6e-52
Identities = 102/197 (51%), Positives = 132/197 (67%), Gaps = 5/197 (2%)
Frame = +3
Query: 3 TPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 182
T T+ Q QMPH D L+IQSPFY+TANFG GA+FWV P+SSPMAPE +ESK
Sbjct: 1072 TITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKL 1131
Query: 183 EFYIRIHGIDSQPDLCKQINYKQRFGWFMV--KPEGK-DKEFQMFVPSRVSNLVIKGVDC 353
E+YI+I GID+ P +C+QINY QRF WF + P+ K K ++ +PSRV N+ K
Sbjct: 1132 EYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATV 1191
Query: 354 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGET 527
TN+VNAFAIMCATTGMH GKCI+HF+W ++G++SF +GMG + HHGE
Sbjct: 1192 TNYVNAFAIMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEF 1251
Query: 528 RVFSIYDNSYSIPFEFG 578
+ +S ++PFEFG
Sbjct: 1252 HLGGPLSSSLAVPFEFG 1268
[3][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 202 bits (514), Expect = 2e-50
Identities = 96/171 (56%), Positives = 118/171 (69%), Gaps = 3/171 (1%)
Frame = +3
Query: 75 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQR 254
IQ+ +TANFG GA+FW++PLS+P AP+ VE+KFEFYIRI GID PDLC+QINYKQR
Sbjct: 284 IQAACCATANFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQR 343
Query: 255 FGWFMVKPEGK-DKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFT 431
FGWFM+ P K E +PSR+ N+ +K C NF NAFAIMCATTGMHWG+CI+HFT
Sbjct: 344 FGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVNFTNAFAIMCATTGMHWGRCILHFT 403
Query: 432 WAWKHDIEASKMKGNLSFGTGMGTKDVHH--GETRVFSIYDNSYSIPFEFG 578
W+W + EA K +S + H R +YDN+YSIPFEFG
Sbjct: 404 WSWHRNTEAGKNAREISQSRLEWVIVLQHIILGIRGILVYDNAYSIPFEFG 454
[4][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 197 bits (502), Expect = 4e-49
Identities = 94/193 (48%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Frame = +3
Query: 6 PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E
Sbjct: 262 PETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSE 321
Query: 186 FYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTN 359
+YI+I GI++ P LC++INYKQRF W +++ K ++ +PSR+ NL K V TN
Sbjct: 322 YYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTN 381
Query: 360 FVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFS 539
FVNA AI+CATTGMH G C +HF+W W H E K G L F GMG + H G+T ++
Sbjct: 382 FVNALAILCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYN 440
Query: 540 IYDNSYSIPFEFG 578
N++S+PF+FG
Sbjct: 441 SLSNTHSVPFQFG 453
[5][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 197 bits (502), Expect = 4e-49
Identities = 94/193 (48%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Frame = +3
Query: 6 PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E
Sbjct: 1099 PETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSE 1158
Query: 186 FYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTN 359
+YI+I GI++ P LC++INYKQRF W +++ K ++ +PSR+ NL K V TN
Sbjct: 1159 YYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTN 1218
Query: 360 FVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFS 539
FVNA AI+CATTGMH G C +HF+W W H E K G L F GMG + H G+T ++
Sbjct: 1219 FVNALAILCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYN 1277
Query: 540 IYDNSYSIPFEFG 578
N++S+PF+FG
Sbjct: 1278 SLSNTHSVPFQFG 1290
[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 181 bits (460), Expect = 3e-44
Identities = 87/195 (44%), Positives = 123/195 (63%), Gaps = 4/195 (2%)
Frame = +3
Query: 6 PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F+
Sbjct: 1095 PTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGFQ 1154
Query: 186 FYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTN 359
+YI IHGI+++ LC++INY Q F WFM++ + +P+R++NL K V TN
Sbjct: 1155 YYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVTN 1214
Query: 360 FVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRV 533
FVNA AIMCATTGMH+GKC +HF+W W + + G +S TGMG V H G
Sbjct: 1215 FVNALAIMCATTGMHFGKCTLHFSWGWYRG-KLADQSGAVSLQTGMGRAAVAEHFGGKHN 1273
Query: 534 FSIYDNSYSIPFEFG 578
F S+S+PF+FG
Sbjct: 1274 FCYPATSFSLPFQFG 1288
[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 177 bits (449), Expect = 5e-43
Identities = 86/195 (44%), Positives = 122/195 (62%), Gaps = 4/195 (2%)
Frame = +3
Query: 6 PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F+
Sbjct: 262 PTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQ 321
Query: 186 FYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTN 359
+YI IHGI + +LC++INY Q F WFM++ + +P+R++NL K V TN
Sbjct: 322 YYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITN 381
Query: 360 FVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRV 533
FVNA AIMCATTGMH+GKC +HF+W W + + G S TGMG V H G
Sbjct: 382 FVNALAIMCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHS 440
Query: 534 FSIYDNSYSIPFEFG 578
F+ ++S+PF+FG
Sbjct: 441 FNYPATNFSLPFQFG 455
[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 177 bits (449), Expect = 5e-43
Identities = 86/195 (44%), Positives = 122/195 (62%), Gaps = 4/195 (2%)
Frame = +3
Query: 6 PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F+
Sbjct: 1094 PTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQ 1153
Query: 186 FYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTN 359
+YI IHGI + +LC++INY Q F WFM++ + +P+R++NL K V TN
Sbjct: 1154 YYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITN 1213
Query: 360 FVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRV 533
FVNA AIMCATTGMH+GKC +HF+W W + + G S TGMG V H G
Sbjct: 1214 FVNALAIMCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHS 1272
Query: 534 FSIYDNSYSIPFEFG 578
F+ ++S+PF+FG
Sbjct: 1273 FNYPATNFSLPFQFG 1287
[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 166 bits (420), Expect = 1e-39
Identities = 88/192 (45%), Positives = 118/192 (61%), Gaps = 2/192 (1%)
Frame = +3
Query: 9 TIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEF 188
T+ Q QMPH D+ G + L+IQSPFY+TAN G A FWV P+SSPMAPE +ES E+
Sbjct: 88 TMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEY 147
Query: 189 YIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFV 365
YI+I GI++ LC+ INYKQ FGWF +V+ +KE + +PSR++N+ K + N V
Sbjct: 148 YIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHV 207
Query: 366 NAFAIMCATTGMHWGK-CIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFSI 542
NAF+IMCATTGM WG +H H +A K S G+ T+ H G+ ++ +
Sbjct: 208 NAFSIMCATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGV 262
Query: 543 YDNSYSIPFEFG 578
S IPFE G
Sbjct: 263 LATSQVIPFEIG 274
[10][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 166 bits (420), Expect = 1e-39
Identities = 88/192 (45%), Positives = 118/192 (61%), Gaps = 2/192 (1%)
Frame = +3
Query: 9 TIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEF 188
T+ Q QMPH D+ G + L+IQSPFY+TAN G A FWV P+SSPMAPE +ES E+
Sbjct: 1108 TMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEY 1167
Query: 189 YIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFV 365
YI+I GI++ LC+ INYKQ FGWF +V+ +KE + +PSR++N+ K + N V
Sbjct: 1168 YIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHV 1227
Query: 366 NAFAIMCATTGMHWGK-CIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFSI 542
NAF+IMCATTGM WG +H H +A K S G+ T+ H G+ ++ +
Sbjct: 1228 NAFSIMCATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGV 1282
Query: 543 YDNSYSIPFEFG 578
S IPFE G
Sbjct: 1283 LATSQVIPFEIG 1294
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 111 bits (277), Expect = 5e-23
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
Frame = +3
Query: 36 HCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 215
H D G + +L I+ FY+++ +G GA + L SPM+P +++ F+ +I G
Sbjct: 284 HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPFDMVFKIKGFTP 343
Query: 216 QPDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 395
+C+ IN+ QRFGWF V+P ++ + ++L + + T + NAF MC T+
Sbjct: 344 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 403
Query: 396 GMHWGKCIVHFTWA-WKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPF 569
MH+G I+HF+W + A+ G ++ G G ++ + G R FSIY+ ++P
Sbjct: 404 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNFSIYEGKATVPL 463
Query: 570 EFG 578
E G
Sbjct: 464 ELG 466
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 109 bits (272), Expect = 2e-22
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Frame = +3
Query: 36 HCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 215
H D G + +L I+ FY+++ +G GA V L SPM+P +++ F+ +I G
Sbjct: 272 HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTP 331
Query: 216 QPDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 395
+C+ IN+ QRFGWF V+P ++ + ++L + + T + NAF MC T+
Sbjct: 332 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 391
Query: 396 GMHWGKCIVHFTWA-WKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPF 569
MH+G I+HF+W + A+ G ++ G G ++ + G R SIY+ ++P
Sbjct: 392 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPL 451
Query: 570 EFG 578
E G
Sbjct: 452 ELG 454
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 109 bits (272), Expect = 2e-22
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Frame = +3
Query: 36 HCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 215
H D G + +L I+ FY+++ +G GA V L SPM+P +++ F+ +I G
Sbjct: 955 HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTP 1014
Query: 216 QPDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 395
+C+ IN+ QRFGWF V+P ++ + ++L + + T + NAF MC T+
Sbjct: 1015 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 1074
Query: 396 GMHWGKCIVHFTWA-WKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPF 569
MH+G I+HF+W + A+ G ++ G G ++ + G R SIY+ ++P
Sbjct: 1075 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPL 1134
Query: 570 EFG 578
E G
Sbjct: 1135 ELG 1137
[14][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 60.8 bits (146), Expect = 7e-08
Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 5/196 (2%)
Frame = +3
Query: 6 PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
PT+ Q PH + G E+ I++ F+S A + ++PLS P+AP+ +E
Sbjct: 273 PTLRQVLWGPHQIMHGDGQFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 332
Query: 186 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDC 353
F + I+ DSQ P + F +KP+ +P + + K
Sbjct: 333 FIVHINTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 392
Query: 354 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETR 530
T N + + A TG H+G+ V +W +A +G++S T + G+ R
Sbjct: 393 TLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 450
Query: 531 VFSIYDNSYSIPFEFG 578
++ + IP G
Sbjct: 451 IYDLRRTEAEIPIFLG 466
[15][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 58.9 bits (141), Expect = 3e-07
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 6/197 (3%)
Frame = +3
Query: 6 PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
PT+ Q PH + G E+ I++ +S A + ++PLS P+AP+ +E
Sbjct: 273 PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 332
Query: 186 FYIRIH--GIDSQPDLCKQINYKQRFGWFM---VKPEGKDKEFQMFVPSRVSNLVIKGVD 350
F + I+ DSQ + + + WF +KP+ +P + + K
Sbjct: 333 FIVHINTWRPDSQVH-PPMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDAT 391
Query: 351 CTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGET 527
T N + + A TG H+G+ V +W +A +G++S T + G+
Sbjct: 392 VTLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQA 449
Query: 528 RVFSIYDNSYSIPFEFG 578
R++ + IP G
Sbjct: 450 RIYDLRRTEAEIPIFLG 466
[16][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 57.8 bits (138), Expect = 6e-07
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 5/196 (2%)
Frame = +3
Query: 6 PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
PT+ Q PH + G E+ I++ +S A + ++PLS P+AP+ +E
Sbjct: 273 PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 332
Query: 186 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDC 353
F + I DSQ P + F +KP+ +P + + K
Sbjct: 333 FIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 392
Query: 354 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETR 530
T N + + A TG H+G+ V +W +A +G++S T + G+ R
Sbjct: 393 TLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 450
Query: 531 VFSIYDNSYSIPFEFG 578
++ + IP G
Sbjct: 451 IYDLRRTEAEIPIFLG 466
[17][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 57.4 bits (137), Expect = 8e-07
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 5/196 (2%)
Frame = +3
Query: 6 PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
PT+ Q PH + G E+ I++ +S A + ++PLS P+AP+ +E
Sbjct: 271 PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 330
Query: 186 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDC 353
F + I DSQ P + F +KP+ +P + + K
Sbjct: 331 FIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 390
Query: 354 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETR 530
T N + + A TG H+G+ V +W +A +G++S T + G+ R
Sbjct: 391 TLASNPLSWLVAATGWHYGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 448
Query: 531 VFSIYDNSYSIPFEFG 578
++ + IP G
Sbjct: 449 IYDLRRTEAEIPIFLG 464
[18][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 57.4 bits (137), Expect = 8e-07
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 5/196 (2%)
Frame = +3
Query: 6 PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
PT+ Q PH + G E+ I++ +S A + ++PLS P+AP+ +E
Sbjct: 859 PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 918
Query: 186 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDC 353
F + I DSQ P + F +KP+ +P + + K
Sbjct: 919 FIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 978
Query: 354 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETR 530
T N + + A TG H+G+ V +W +A +G++S T + G+ R
Sbjct: 979 TLASNPLSWLVAATGWHYGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 1036
Query: 531 VFSIYDNSYSIPFEFG 578
++ + IP G
Sbjct: 1037 IYDLRRTEAEIPIFLG 1052
[19][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 55.1 bits (131), Expect = 4e-06
Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 5/196 (2%)
Frame = +3
Query: 6 PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
PT+ Q PH + G E+ ++ +S++ + ++PLS P+AP+ +E
Sbjct: 273 PTLRQVLWGPHQIMHGDGQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYE 332
Query: 186 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDC 353
F + I DSQ P + F +KP+ +P + + K
Sbjct: 333 FIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 392
Query: 354 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETR 530
T N + + A TG H+G+ V +W +A +G++S T + G+ R
Sbjct: 393 TLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 450
Query: 531 VFSIYDNSYSIPFEFG 578
++ + IP G
Sbjct: 451 IYDLRRTEAEIPIFLG 466