BB913895 ( RCE13360 )

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[1][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
           RepID=UPI0000163D16
          Length = 514

 Score =  207 bits (526), Expect = 6e-52
 Identities = 102/197 (51%), Positives = 132/197 (67%), Gaps = 5/197 (2%)
 Frame = +3

Query: 3   TPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 182
           T T+ Q  QMPH D        L+IQSPFY+TANFG  GA+FWV P+SSPMAPE +ESK 
Sbjct: 262 TITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKL 321

Query: 183 EFYIRIHGIDSQPDLCKQINYKQRFGWFMV--KPEGK-DKEFQMFVPSRVSNLVIKGVDC 353
           E+YI+I GID+ P +C+QINY QRF WF +   P+ K  K  ++ +PSRV N+  K    
Sbjct: 322 EYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATV 381

Query: 354 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGET 527
           TN+VNAFAIMCATTGMH GKCI+HF+W          ++G++SF +GMG   +  HHGE 
Sbjct: 382 TNYVNAFAIMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEF 441

Query: 528 RVFSIYDNSYSIPFEFG 578
            +     +S ++PFEFG
Sbjct: 442 HLGGPLSSSLAVPFEFG 458

[2][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
          Length = 1324

 Score =  207 bits (526), Expect = 6e-52
 Identities = 102/197 (51%), Positives = 132/197 (67%), Gaps = 5/197 (2%)
 Frame = +3

Query: 3    TPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 182
            T T+ Q  QMPH D        L+IQSPFY+TANFG  GA+FWV P+SSPMAPE +ESK 
Sbjct: 1072 TITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKL 1131

Query: 183  EFYIRIHGIDSQPDLCKQINYKQRFGWFMV--KPEGK-DKEFQMFVPSRVSNLVIKGVDC 353
            E+YI+I GID+ P +C+QINY QRF WF +   P+ K  K  ++ +PSRV N+  K    
Sbjct: 1132 EYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATV 1191

Query: 354  TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGET 527
            TN+VNAFAIMCATTGMH GKCI+HF+W          ++G++SF +GMG   +  HHGE 
Sbjct: 1192 TNYVNAFAIMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEF 1251

Query: 528  RVFSIYDNSYSIPFEFG 578
             +     +S ++PFEFG
Sbjct: 1252 HLGGPLSSSLAVPFEFG 1268

[3][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
           RepID=Q64959_9SECO
          Length = 510

 Score =  202 bits (514), Expect = 2e-50
 Identities = 96/171 (56%), Positives = 118/171 (69%), Gaps = 3/171 (1%)
 Frame = +3

Query: 75  IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQR 254
           IQ+   +TANFG  GA+FW++PLS+P AP+ VE+KFEFYIRI GID  PDLC+QINYKQR
Sbjct: 284 IQAACCATANFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQR 343

Query: 255 FGWFMVKPEGK-DKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFT 431
           FGWFM+ P  K   E    +PSR+ N+ +K   C NF NAFAIMCATTGMHWG+CI+HFT
Sbjct: 344 FGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVNFTNAFAIMCATTGMHWGRCILHFT 403

Query: 432 WAWKHDIEASKMKGNLSFGTGMGTKDVHH--GETRVFSIYDNSYSIPFEFG 578
           W+W  + EA K    +S         + H     R   +YDN+YSIPFEFG
Sbjct: 404 WSWHRNTEAGKNAREISQSRLEWVIVLQHIILGIRGILVYDNAYSIPFEFG 454

[4][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
          Length = 520

 Score =  197 bits (502), Expect = 4e-49
 Identities = 94/193 (48%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
 Frame = +3

Query: 6   PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
           P   Q  QMPH D+       L+IQSPF+STANFG+ G+ F+V  L +PMAPE VE+  E
Sbjct: 262 PETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSE 321

Query: 186 FYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTN 359
           +YI+I GI++ P LC++INYKQRF W +++     K    ++ +PSR+ NL  K V  TN
Sbjct: 322 YYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTN 381

Query: 360 FVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFS 539
           FVNA AI+CATTGMH G C +HF+W W H  E  K  G L F  GMG  + H G+T  ++
Sbjct: 382 FVNALAILCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYN 440

Query: 540 IYDNSYSIPFEFG 578
              N++S+PF+FG
Sbjct: 441 SLSNTHSVPFQFG 453

[5][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
          Length = 1357

 Score =  197 bits (502), Expect = 4e-49
 Identities = 94/193 (48%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
 Frame = +3

Query: 6    PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
            P   Q  QMPH D+       L+IQSPF+STANFG+ G+ F+V  L +PMAPE VE+  E
Sbjct: 1099 PETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSE 1158

Query: 186  FYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTN 359
            +YI+I GI++ P LC++INYKQRF W +++     K    ++ +PSR+ NL  K V  TN
Sbjct: 1159 YYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTN 1218

Query: 360  FVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFS 539
            FVNA AI+CATTGMH G C +HF+W W H  E  K  G L F  GMG  + H G+T  ++
Sbjct: 1219 FVNALAILCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYN 1277

Query: 540  IYDNSYSIPFEFG 578
               N++S+PF+FG
Sbjct: 1278 SLSNTHSVPFQFG 1290

[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
          Length = 1344

 Score =  181 bits (460), Expect = 3e-44
 Identities = 87/195 (44%), Positives = 123/195 (63%), Gaps = 4/195 (2%)
 Frame = +3

Query: 6    PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
            PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F+
Sbjct: 1095 PTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGFQ 1154

Query: 186  FYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTN 359
            +YI IHGI+++  LC++INY Q F WFM++           + +P+R++NL  K V  TN
Sbjct: 1155 YYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVTN 1214

Query: 360  FVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRV 533
            FVNA AIMCATTGMH+GKC +HF+W W    + +   G +S  TGMG   V  H G    
Sbjct: 1215 FVNALAIMCATTGMHFGKCTLHFSWGWYRG-KLADQSGAVSLQTGMGRAAVAEHFGGKHN 1273

Query: 534  FSIYDNSYSIPFEFG 578
            F     S+S+PF+FG
Sbjct: 1274 FCYPATSFSLPFQFG 1288

[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
          Length = 511

 Score =  177 bits (449), Expect = 5e-43
 Identities = 86/195 (44%), Positives = 122/195 (62%), Gaps = 4/195 (2%)
 Frame = +3

Query: 6   PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
           PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F+
Sbjct: 262 PTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQ 321

Query: 186 FYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTN 359
           +YI IHGI  + +LC++INY Q F WFM++           + +P+R++NL  K V  TN
Sbjct: 322 YYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITN 381

Query: 360 FVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRV 533
           FVNA AIMCATTGMH+GKC +HF+W W    + +   G  S  TGMG   V  H G    
Sbjct: 382 FVNALAIMCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHS 440

Query: 534 FSIYDNSYSIPFEFG 578
           F+    ++S+PF+FG
Sbjct: 441 FNYPATNFSLPFQFG 455

[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
          Length = 1343

 Score =  177 bits (449), Expect = 5e-43
 Identities = 86/195 (44%), Positives = 122/195 (62%), Gaps = 4/195 (2%)
 Frame = +3

Query: 6    PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
            PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F+
Sbjct: 1094 PTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQ 1153

Query: 186  FYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTN 359
            +YI IHGI  + +LC++INY Q F WFM++           + +P+R++NL  K V  TN
Sbjct: 1154 YYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITN 1213

Query: 360  FVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRV 533
            FVNA AIMCATTGMH+GKC +HF+W W    + +   G  S  TGMG   V  H G    
Sbjct: 1214 FVNALAIMCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHS 1272

Query: 534  FSIYDNSYSIPFEFG 578
            F+    ++S+PF+FG
Sbjct: 1273 FNYPATNFSLPFQFG 1287

[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
           virus RepID=Q6XPY1_9SECO
          Length = 330

 Score =  166 bits (420), Expect = 1e-39
 Identities = 88/192 (45%), Positives = 118/192 (61%), Gaps = 2/192 (1%)
 Frame = +3

Query: 9   TIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEF 188
           T+ Q  QMPH D+  G +  L+IQSPFY+TAN G   A FWV P+SSPMAPE +ES  E+
Sbjct: 88  TMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEY 147

Query: 189 YIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFV 365
           YI+I GI++   LC+ INYKQ FGWF +V+    +KE  + +PSR++N+  K  +  N V
Sbjct: 148 YIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHV 207

Query: 366 NAFAIMCATTGMHWGK-CIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFSI 542
           NAF+IMCATTGM WG    +H      H  +A   K   S   G+ T+  H G+ ++  +
Sbjct: 208 NAFSIMCATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGV 262

Query: 543 YDNSYSIPFEFG 578
              S  IPFE G
Sbjct: 263 LATSQVIPFEIG 274

[10][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
            RepID=Q6JX06_9SECO
          Length = 1350

 Score =  166 bits (420), Expect = 1e-39
 Identities = 88/192 (45%), Positives = 118/192 (61%), Gaps = 2/192 (1%)
 Frame = +3

Query: 9    TIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEF 188
            T+ Q  QMPH D+  G +  L+IQSPFY+TAN G   A FWV P+SSPMAPE +ES  E+
Sbjct: 1108 TMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEY 1167

Query: 189  YIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFV 365
            YI+I GI++   LC+ INYKQ FGWF +V+    +KE  + +PSR++N+  K  +  N V
Sbjct: 1168 YIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHV 1227

Query: 366  NAFAIMCATTGMHWGK-CIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFSI 542
            NAF+IMCATTGM WG    +H      H  +A   K   S   G+ T+  H G+ ++  +
Sbjct: 1228 NAFSIMCATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGV 1282

Query: 543  YDNSYSIPFEFG 578
               S  IPFE G
Sbjct: 1283 LATSQVIPFEIG 1294

[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
           RepID=Q1T7B1_CNSV
          Length = 569

 Score =  111 bits (277), Expect = 5e-23
 Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
 Frame = +3

Query: 36  HCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 215
           H D   G + +L I+  FY+++ +G  GA   +  L SPM+P  +++ F+   +I G   
Sbjct: 284 HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPFDMVFKIKGFTP 343

Query: 216 QPDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 395
              +C+ IN+ QRFGWF V+P       ++ +    ++L  + +  T + NAF  MC T+
Sbjct: 344 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 403

Query: 396 GMHWGKCIVHFTWA-WKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPF 569
            MH+G  I+HF+W  +     A+   G ++   G G ++ +  G  R FSIY+   ++P 
Sbjct: 404 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNFSIYEGKATVPL 463

Query: 570 EFG 578
           E G
Sbjct: 464 ELG 466

[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
           RepID=UPI0000164A26
          Length = 564

 Score =  109 bits (272), Expect = 2e-22
 Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
 Frame = +3

Query: 36  HCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 215
           H D   G + +L I+  FY+++ +G  GA   V  L SPM+P  +++ F+   +I G   
Sbjct: 272 HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTP 331

Query: 216 QPDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 395
              +C+ IN+ QRFGWF V+P       ++ +    ++L  + +  T + NAF  MC T+
Sbjct: 332 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 391

Query: 396 GMHWGKCIVHFTWA-WKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPF 569
            MH+G  I+HF+W  +     A+   G ++   G G ++ +  G  R  SIY+   ++P 
Sbjct: 392 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPL 451

Query: 570 EFG 578
           E G
Sbjct: 452 ELG 454

[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
          Length = 1240

 Score =  109 bits (272), Expect = 2e-22
 Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
 Frame = +3

Query: 36   HCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 215
            H D   G + +L I+  FY+++ +G  GA   V  L SPM+P  +++ F+   +I G   
Sbjct: 955  HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTP 1014

Query: 216  QPDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 395
               +C+ IN+ QRFGWF V+P       ++ +    ++L  + +  T + NAF  MC T+
Sbjct: 1015 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 1074

Query: 396  GMHWGKCIVHFTWA-WKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPF 569
             MH+G  I+HF+W  +     A+   G ++   G G ++ +  G  R  SIY+   ++P 
Sbjct: 1075 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPL 1134

Query: 570  EFG 578
            E G
Sbjct: 1135 ELG 1137

[14][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
          Length = 515

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 5/196 (2%)
 Frame = +3

Query: 6   PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
           PT+ Q    PH  +   G  E+ I++ F+S A       +  ++PLS P+AP+     +E
Sbjct: 273 PTLRQVLWGPHQIMHGDGQFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 332

Query: 186 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDC 353
           F + I+    DSQ  P +         F    +KP+         +P  + +   K    
Sbjct: 333 FIVHINTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 392

Query: 354 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETR 530
           T   N  + + A TG H+G+  V    +W    +A   +G++S  T       +  G+ R
Sbjct: 393 TLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 450

Query: 531 VFSIYDNSYSIPFEFG 578
           ++ +      IP   G
Sbjct: 451 IYDLRRTEAEIPIFLG 466

[15][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
          Length = 515

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 6/197 (3%)
 Frame = +3

Query: 6   PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
           PT+ Q    PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +E
Sbjct: 273 PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 332

Query: 186 FYIRIH--GIDSQPDLCKQINYKQRFGWFM---VKPEGKDKEFQMFVPSRVSNLVIKGVD 350
           F + I+    DSQ       +  + + WF    +KP+         +P  + +   K   
Sbjct: 333 FIVHINTWRPDSQVH-PPMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDAT 391

Query: 351 CTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGET 527
            T   N  + + A TG H+G+  V    +W    +A   +G++S  T       +  G+ 
Sbjct: 392 VTLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQA 449

Query: 528 RVFSIYDNSYSIPFEFG 578
           R++ +      IP   G
Sbjct: 450 RIYDLRRTEAEIPIFLG 466

[16][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
          Length = 515

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 5/196 (2%)
 Frame = +3

Query: 6   PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
           PT+ Q    PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +E
Sbjct: 273 PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 332

Query: 186 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDC 353
           F + I     DSQ  P +         F    +KP+         +P  + +   K    
Sbjct: 333 FIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 392

Query: 354 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETR 530
           T   N  + + A TG H+G+  V    +W    +A   +G++S  T       +  G+ R
Sbjct: 393 TLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 450

Query: 531 VFSIYDNSYSIPFEFG 578
           ++ +      IP   G
Sbjct: 451 IYDLRRTEAEIPIFLG 466

[17][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
          Length = 513

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 5/196 (2%)
 Frame = +3

Query: 6   PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
           PT+ Q    PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +E
Sbjct: 271 PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 330

Query: 186 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDC 353
           F + I     DSQ  P +         F    +KP+         +P  + +   K    
Sbjct: 331 FIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 390

Query: 354 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETR 530
           T   N  + + A TG H+G+  V    +W    +A   +G++S  T       +  G+ R
Sbjct: 391 TLASNPLSWLVAATGWHYGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 448

Query: 531 VFSIYDNSYSIPFEFG 578
           ++ +      IP   G
Sbjct: 449 IYDLRRTEAEIPIFLG 464

[18][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
          Length = 1101

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 5/196 (2%)
 Frame = +3

Query: 6    PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
            PT+ Q    PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +E
Sbjct: 859  PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 918

Query: 186  FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDC 353
            F + I     DSQ  P +         F    +KP+         +P  + +   K    
Sbjct: 919  FIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 978

Query: 354  TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETR 530
            T   N  + + A TG H+G+  V    +W    +A   +G++S  T       +  G+ R
Sbjct: 979  TLASNPLSWLVAATGWHYGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 1036

Query: 531  VFSIYDNSYSIPFEFG 578
            ++ +      IP   G
Sbjct: 1037 IYDLRRTEAEIPIFLG 1052

[19][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
           RepID=Q5L492_TRSV
          Length = 515

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 5/196 (2%)
 Frame = +3

Query: 6   PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 185
           PT+ Q    PH  +   G  E+  ++  +S++       +  ++PLS P+AP+     +E
Sbjct: 273 PTLRQVLWGPHQIMHGDGQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYE 332

Query: 186 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDC 353
           F + I     DSQ  P +         F    +KP+         +P  + +   K    
Sbjct: 333 FIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 392

Query: 354 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETR 530
           T   N  + + A TG H+G+  V    +W    +A   +G++S  T       +  G+ R
Sbjct: 393 TLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 450

Query: 531 VFSIYDNSYSIPFEFG 578
           ++ +      IP   G
Sbjct: 451 IYDLRRTEAEIPIFLG 466