BB913892 ( RCE13357 )

[UP]


[1][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
          Length = 824

 Score =  322 bits (826), Expect = 1e-86
 Identities = 155/193 (80%), Positives = 169/193 (87%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           VNSVFNEILIRYAY+KLAP PE+ RF  TVCL+VYGDDNLISV+PS ASWF GEAIR+TL
Sbjct: 351 VNSVFNEILIRYAYKKLAPAPERNRFGSTVCLLVYGDDNLISVSPSIASWFTGEAIRITL 410

Query: 182 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
           AEKKVKITDGSDKDAPTIE K FWELDFLKRKFLKLD G++QAPLD +AIFSSLYWLTP 
Sbjct: 411 AEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDNGIVQAPLDRSAIFSSLYWLTPD 470

Query: 362 KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 541
           K KFH  QK S + GEVDVIEEL+LNVNVALMELYLHND  EFQRVR F+  RLPL+V Q
Sbjct: 471 KSKFHESQKPSDFQGEVDVIEELLLNVNVALMELYLHNDVAEFQRVRGFYAQRLPLMVSQ 530

Query: 542 FRTWAFCESFHSS 580
            RTWAFCE+FHS+
Sbjct: 531 LRTWAFCEAFHSA 543

[2][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
           RepID=UPI0000163E03
          Length = 824

 Score =  322 bits (826), Expect = 1e-86
 Identities = 152/193 (78%), Positives = 169/193 (87%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           VNSVFNEILIRYAY+KLAPKPE+ RF Q VCL+VYGDDNLISV+PS ASWF GEAIR+TL
Sbjct: 351 VNSVFNEILIRYAYKKLAPKPERNRFNQVVCLLVYGDDNLISVSPSIASWFTGEAIRITL 410

Query: 182 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
           AEKKVKITDGSDKDAPTIE K FWELDFLKRKFLKLD G++QAPLD +AIFSSLYWLTP 
Sbjct: 411 AEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDNGIVQAPLDRSAIFSSLYWLTPD 470

Query: 362 KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 541
           K KFH  Q+AS + G VDV+EEL+LNVNVALMELYLHND +EF RVR F++  LPL   Q
Sbjct: 471 KSKFHASQRASDFQGTVDVVEELILNVNVALMELYLHNDPREFSRVRDFYIKALPLATGQ 530

Query: 542 FRTWAFCESFHSS 580
           FRTWAFCE+FHS+
Sbjct: 531 FRTWAFCEAFHSA 543

[3][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
            RepID=POL1_TBRVM
          Length = 2266

 Score =  322 bits (826), Expect = 1e-86
 Identities = 155/193 (80%), Positives = 169/193 (87%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            VNSVFNEILIRYAY+KLAP PE+ RF  TVCL+VYGDDNLISV+PS ASWF GEAIR+TL
Sbjct: 1793 VNSVFNEILIRYAYKKLAPAPERNRFGSTVCLLVYGDDNLISVSPSIASWFTGEAIRITL 1852

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            AEKKVKITDGSDKDAPTIE K FWELDFLKRKFLKLD G++QAPLD +AIFSSLYWLTP 
Sbjct: 1853 AEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDNGIVQAPLDRSAIFSSLYWLTPD 1912

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 541
            K KFH  QK S + GEVDVIEEL+LNVNVALMELYLHND  EFQRVR F+  RLPL+V Q
Sbjct: 1913 KSKFHESQKPSDFQGEVDVIEELLLNVNVALMELYLHNDVAEFQRVRGFYAQRLPLMVSQ 1972

Query: 542  FRTWAFCESFHSS 580
             RTWAFCE+FHS+
Sbjct: 1973 LRTWAFCEAFHSA 1985

[4][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=POL1_BRSV
          Length = 2264

 Score =  322 bits (826), Expect = 1e-86
 Identities = 152/193 (78%), Positives = 169/193 (87%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            VNSVFNEILIRYAY+KLAPKPE+ RF Q VCL+VYGDDNLISV+PS ASWF GEAIR+TL
Sbjct: 1791 VNSVFNEILIRYAYKKLAPKPERNRFNQVVCLLVYGDDNLISVSPSIASWFTGEAIRITL 1850

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            AEKKVKITDGSDKDAPTIE K FWELDFLKRKFLKLD G++QAPLD +AIFSSLYWLTP 
Sbjct: 1851 AEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDNGIVQAPLDRSAIFSSLYWLTPD 1910

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 541
            K KFH  Q+AS + G VDV+EEL+LNVNVALMELYLHND +EF RVR F++  LPL   Q
Sbjct: 1911 KSKFHASQRASDFQGTVDVVEELILNVNVALMELYLHNDPREFSRVRDFYIKALPLATGQ 1970

Query: 542  FRTWAFCESFHSS 580
            FRTWAFCE+FHS+
Sbjct: 1971 FRTWAFCEAFHSA 1983

[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
           RepID=UPI00017F0C90
          Length = 826

 Score =  288 bits (736), Expect = 3e-76
 Identities = 139/194 (71%), Positives = 164/194 (84%), Gaps = 1/194 (0%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           +NS+FNEILIRYAY+ LAP PEK  F   VCL+VYGDDNLISV+P+ ASWF GEAIRVTL
Sbjct: 349 MNSIFNEILIRYAYKTLAPTPEKNSFGINVCLLVYGDDNLISVSPAVASWFTGEAIRVTL 408

Query: 182 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF-LKLDTGVIQAPLDMTAIFSSLYWLTP 358
           AEK++KITDGSDKDAPTIE KPF ELDFLKRKF +  + G + APLD +AIFS L+WLTP
Sbjct: 409 AEKRIKITDGSDKDAPTIEAKPFSELDFLKRKFYVHPEHGQVWAPLDKSAIFSCLHWLTP 468

Query: 359 SKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVD 538
            K KF   +KA  Y GEVDV+EEL++NVNV+L+ELYLHND +EF RVRSF++ARLP+ VD
Sbjct: 469 QKSKFALQEKACDYLGEVDVVEELIINVNVSLVELYLHNDKEEFNRVRSFYIARLPMQVD 528

Query: 539 QFRTWAFCESFHSS 580
           QFRTWAFCE+FHS+
Sbjct: 529 QFRTWAFCEAFHSA 542

[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=POL1_GCMV
          Length = 2252

 Score =  288 bits (736), Expect = 3e-76
 Identities = 139/194 (71%), Positives = 164/194 (84%), Gaps = 1/194 (0%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NS+FNEILIRYAY+ LAP PEK  F   VCL+VYGDDNLISV+P+ ASWF GEAIRVTL
Sbjct: 1775 MNSIFNEILIRYAYKTLAPTPEKNSFGINVCLLVYGDDNLISVSPAVASWFTGEAIRVTL 1834

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF-LKLDTGVIQAPLDMTAIFSSLYWLTP 358
            AEK++KITDGSDKDAPTIE KPF ELDFLKRKF +  + G + APLD +AIFS L+WLTP
Sbjct: 1835 AEKRIKITDGSDKDAPTIEAKPFSELDFLKRKFYVHPEHGQVWAPLDKSAIFSCLHWLTP 1894

Query: 359  SKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVD 538
             K KF   +KA  Y GEVDV+EEL++NVNV+L+ELYLHND +EF RVRSF++ARLP+ VD
Sbjct: 1895 QKSKFALQEKACDYLGEVDVVEELIINVNVSLVELYLHNDKEEFNRVRSFYIARLPMQVD 1954

Query: 539  QFRTWAFCESFHSS 580
            QFRTWAFCE+FHS+
Sbjct: 1955 QFRTWAFCEAFHSA 1968

[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
           RepID=UPI00003FE52F
          Length = 846

 Score =  199 bits (506), Expect = 1e-49
 Identities = 104/193 (53%), Positives = 132/193 (68%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           +NSVFNEIL+RY ++ L   P++  F   V L+VYGDDNL+S     A +FNGE I+ TL
Sbjct: 359 INSVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNLMSCTDKIAIYFNGETIKETL 418

Query: 182 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            +K V ITDGSDK AP I+ K   ELDFLKR+FLKL+TGV+QAPLD+TAIFS L+W+TP 
Sbjct: 419 KKKNVTITDGSDKTAPDIKWKTLGELDFLKRRFLKLETGVVQAPLDLTAIFSCLHWVTPH 478

Query: 362 KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 541
             K        Q    VD + EL LNV VAL ELYLH + +EFQRVR+F+  ++ +L   
Sbjct: 479 PQKMPKGGAQLQVE-NVDTLYELALNVQVALTELYLHGNKEEFQRVRNFYTKKMNILPAG 537

Query: 542 FRTWAFCESFHSS 580
           + TWA  E+FH S
Sbjct: 538 YYTWADREAFHMS 550

[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=POL1_CNSV
          Length = 2336

 Score =  199 bits (506), Expect = 1e-49
 Identities = 104/193 (53%), Positives = 132/193 (68%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NSVFNEIL+RY ++ L   P++  F   V L+VYGDDNL+S     A +FNGE I+ TL
Sbjct: 1849 INSVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNLMSCTDKIAIYFNGETIKETL 1908

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
             +K V ITDGSDK AP I+ K   ELDFLKR+FLKL+TGV+QAPLD+TAIFS L+W+TP 
Sbjct: 1909 KKKNVTITDGSDKTAPDIKWKTLGELDFLKRRFLKLETGVVQAPLDLTAIFSCLHWVTPH 1968

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 541
              K        Q    VD + EL LNV VAL ELYLH + +EFQRVR+F+  ++ +L   
Sbjct: 1969 PQKMPKGGAQLQVE-NVDTLYELALNVQVALTELYLHGNKEEFQRVRNFYTKKMNILPAG 2027

Query: 542  FRTWAFCESFHSS 580
            + TWA  E+FH S
Sbjct: 2028 YYTWADREAFHMS 2040

[9][TOP]
>UniRef100_Q9QRA9 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA9_9SECO
          Length = 985

 Score =  171 bits (433), Expect = 4e-41
 Identities = 90/191 (47%), Positives = 116/191 (60%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NS+FNE+LIRY YR   P+P    F Q VCLIVYGDDNLISV P    +FNG+ I+  L
Sbjct: 626  INSLFNEMLIRYVYRVTVPRPLVNNFNQEVCLIVYGDDNLISVKPDTMKYFNGDRIKEVL 685

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            A+ KV ITDGSDK++P +  KP  +LDFLKR F     G + APLD+ AIFSSLY++ P 
Sbjct: 686  AKFKVTITDGSDKNSPVLRAKPLKQLDFLKRGFKVQSDGRVLAPLDLQAIFSSLYYINP- 744

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 541
                           + + +  L LN  VAL ELYLHND ++F  VR+F+V ++      
Sbjct: 745  ---------------QGNTLNSLFLNAQVALRELYLHNDIEQFTAVRNFYVTQIGGNFLN 789

Query: 542  FRTWAFCESFH 574
               W  C +FH
Sbjct: 790  LPQWRHCAAFH 800

[10][TOP]
>UniRef100_UPI00003FE53F RNA-dependent RNA polymerase n=1 Tax=Tomato ringspot virus
           RepID=UPI00003FE53F
          Length = 711

 Score =  171 bits (432), Expect = 5e-41
 Identities = 89/191 (46%), Positives = 118/191 (61%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           +NS+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNLIS+ P    +FNGE I+  L
Sbjct: 352 INSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKTIL 411

Query: 182 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
           A+ KV ITDGSDK++P +  KP  +LDFLKR F     G + APLD+ AI+SSLY++ P 
Sbjct: 412 AKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSSLYYINP- 470

Query: 362 KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 541
                          + ++++ L LN  VAL ELYLH D ++F  VR+F+V ++      
Sbjct: 471 ---------------QGNILKSLFLNAQVALRELYLHGDVEQFTAVRNFYVNQIGGNFLS 515

Query: 542 FRTWAFCESFH 574
              W  C SFH
Sbjct: 516 LPQWRHCASFH 526

[11][TOP]
>UniRef100_Q9QRA7 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA7_9SECO
          Length = 985

 Score =  171 bits (432), Expect = 5e-41
 Identities = 89/191 (46%), Positives = 118/191 (61%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NS+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNLIS+ P    +FNGE I+  L
Sbjct: 626  INSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKTIL 685

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            A+ KV ITDGSDK++P +  KP  +LDFLKR F     G + APLD+ AI+SSLY++ P 
Sbjct: 686  AKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSSLYYINP- 744

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 541
                           + ++++ L LN  VAL ELYLH D ++F  VR+F+V ++      
Sbjct: 745  ---------------QGNILKSLFLNAQVALRELYLHGDVEQFTAVRNFYVNQIGGNFLS 789

Query: 542  FRTWAFCESFH 574
               W  C SFH
Sbjct: 790  LPQWRHCASFH 800

[12][TOP]
>UniRef100_P29150 RNA-directed RNA polymerase n=1 Tax=Tomato ringspot virus (ISOLATE
            RASPBERRY) RepID=POL1_TORVR
          Length = 2197

 Score =  171 bits (432), Expect = 5e-41
 Identities = 89/191 (46%), Positives = 118/191 (61%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NS+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNLIS+ P    +FNGE I+  L
Sbjct: 1838 INSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKTIL 1897

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            A+ KV ITDGSDK++P +  KP  +LDFLKR F     G + APLD+ AI+SSLY++ P 
Sbjct: 1898 AKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSSLYYINP- 1956

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 541
                           + ++++ L LN  VAL ELYLH D ++F  VR+F+V ++      
Sbjct: 1957 ---------------QGNILKSLFLNAQVALRELYLHGDVEQFTAVRNFYVNQIGGNFLS 2001

Query: 542  FRTWAFCESFH 574
               W  C SFH
Sbjct: 2002 LPQWRHCASFH 2012

[13][TOP]
>UniRef100_Q9QRA8 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA8_9SECO
          Length = 985

 Score =  170 bits (431), Expect = 6e-41
 Identities = 89/191 (46%), Positives = 116/191 (60%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NS+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNLIS+ P    +FNGE I+  L
Sbjct: 626  INSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKTIL 685

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            A  KV ITDGSDK++P +  KP  +LDFLKR F     G + APLD+ AI+SSLY++ P 
Sbjct: 686  ARYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSSLYYINP- 744

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 541
                           + +++  L LN  VAL ELYLH D ++F  VR+F+V ++      
Sbjct: 745  ---------------QGNILNSLFLNAQVALRELYLHGDVEQFTAVRNFYVKQIGGNFLS 789

Query: 542  FRTWAFCESFH 574
               W  C SFH
Sbjct: 790  LPQWRHCASFH 800

[14][TOP]
>UniRef100_Q9QRA6 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA6_9SECO
          Length = 985

 Score =  169 bits (429), Expect = 1e-40
 Identities = 89/191 (46%), Positives = 116/191 (60%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NS+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNLIS+ P    +FNGE I+  L
Sbjct: 626  INSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKTIL 685

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            A  KV ITDGSDK++P +  KP  +LDFLKR F     G + APLD+ AI+SSLY++ P 
Sbjct: 686  ANIKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSSLYYINP- 744

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 541
                           + +++  L LN  VAL ELYLH D ++F  VR+F+V ++      
Sbjct: 745  ---------------QGNILNSLFLNAQVALRELYLHGDVEQFTAVRNFYVNQIGGNFLS 789

Query: 542  FRTWAFCESFH 574
               W  C SFH
Sbjct: 790  LPQWRHCASFH 800

[15][TOP]
>UniRef100_Q155U1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato ringspot
           virus RepID=Q155U1_9SECO
          Length = 711

 Score =  166 bits (419), Expect = 2e-39
 Identities = 86/191 (45%), Positives = 116/191 (60%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           +NS+FNE+LI Y YR   P+     F+Q VCLIVYGDDNLIS+ P    +FNGE I+ TL
Sbjct: 352 INSLFNELLIGYVYRVTVPRSLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKSTL 411

Query: 182 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
           A+ ++ ITDGSDK++P +  KP  +LDFLKR F     G + APLD+ AI+SSLY++ P 
Sbjct: 412 AKYRITITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSSLYYINP- 470

Query: 362 KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 541
                          + +++  L LN  VAL ELYLH D ++F  VR+F+V ++      
Sbjct: 471 ---------------QGNILNSLFLNAQVALRELYLHGDVEQFTAVRNFYVKQIGGNFLN 515

Query: 542 FRTWAFCESFH 574
              W  C SFH
Sbjct: 516 LPQWRHCASFH 526

[16][TOP]
>UniRef100_Q88893 RNA-directed RNA polymerase n=1 Tax=Tobacco ringspot virus strain Bud
            Blight RepID=POL1_TRSVB
          Length = 2304

 Score =  158 bits (400), Expect = 3e-37
 Identities = 87/176 (49%), Positives = 109/176 (61%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NSVFNEILIRY Y+ + P PE  RF+  V L+VYGDDNLI+V PS    F GE I+ TL
Sbjct: 1850 LNSVFNEILIRYVYKTVIPSPEFNRFETFVTLVVYGDDNLIAVDPSMQKIFTGEVIKKTL 1909

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            A KK+ ITDGSDK +P +E KP  +LDFLKR FL  D+G +   LD T I+SSL +L   
Sbjct: 1910 ARKKITITDGSDKLSPVLEAKPLAQLDFLKRSFLVSDSGQVMPALDRTCIYSSLLYLR-- 1967

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL 529
                         S + D I  L  NV  AL ELY   D +EF  +R+F++ RLP+
Sbjct: 1968 -------------SADCDPIPLLHQNVQNALQELYYRQDREEFDNLRTFYLERLPM 2010

[17][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
            RepID=A2ID54_9SECO
          Length = 1916

 Score =  152 bits (385), Expect = 1e-35
 Identities = 83/193 (43%), Positives = 113/193 (58%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NS+FNEIL+R  Y+ + P   +  F + V L+VYGDDNLI+V PS    FNG+ I+ T+
Sbjct: 1547 LNSIFNEILVRMVYKTVVPGVPRNHFNEYVTLLVYGDDNLIAVDPSILEVFNGDVIKKTM 1606

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            A+ +V ITDGSDK +PT+  KP   LDFLKR F   D G + APLD TAI+SSL+W+   
Sbjct: 1607 AKWRVTITDGSDKLSPTLTEKPLLSLDFLKRGFKLADNGQVYAPLDKTAIYSSLHWVAGR 1666

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 541
                             DV+  L  N   AL+E++ H D  EF  +RSF+V+++P   D 
Sbjct: 1667 GQ---------------DVMSALKDNARSALIEMWAHQDKAEFVELRSFYVSKIPSWSD- 1710

Query: 542  FRTWAFCESFHSS 580
              TW     FH +
Sbjct: 1711 LPTWDQARCFHEA 1723

[18][TOP]
>UniRef100_P29149 RNA-directed RNA polymerase n=1 Tax=Grapevine fanleaf virus
            RepID=POL1_GFLV
          Length = 2284

 Score =  144 bits (363), Expect = 5e-33
 Identities = 78/192 (40%), Positives = 115/192 (59%), Gaps = 1/192 (0%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NS+F E+L+RY ++K+ P   K  F + V LI YGDDN+ +VA S   +F G+A+++ +
Sbjct: 1802 LNSIFKELLMRYCFKKIVPPVYKECFDRCVVLITYGDDNVFTVAQSVMQYFTGDALKMQM 1861

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            A+  V ITDG DK   TI  +P  EL+FLKR F++   G+I APL+  +I SSL ++   
Sbjct: 1862 AKLGVTITDGKDKSLSTIPARPLLELEFLKRGFVRSSGGMINAPLEKLSIMSSLVYIR-- 1919

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL-LVD 538
                         S   D++++L+ NVN AL+ELYLH D   F+ VR+F+  +LP     
Sbjct: 1920 -------------SDGSDMLQKLLDNVNTALVELYLHGDRTYFESVRAFYFEKLPPGAYK 1966

Query: 539  QFRTWAFCESFH 574
            +  TW   ESFH
Sbjct: 1967 ELTTWFQAESFH 1978

[19][TOP]
>UniRef100_UPI00003FE537 RNA-dependent RNA polymerase n=1 Tax=Arabis mosaic virus
           RepID=UPI00003FE537
          Length = 825

 Score =  138 bits (348), Expect = 3e-31
 Identities = 77/192 (40%), Positives = 113/192 (58%), Gaps = 1/192 (0%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           +NS+FNE+L+RY Y+K+ P   +  F + V LI YGDDN+ +V+ S  + F G+A++  +
Sbjct: 342 INSIFNELLMRYCYKKIVPPIYRECFDRCVVLITYGDDNVFTVSQSIMTSFTGDALKAEM 401

Query: 182 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
           A   V ITDG DK   TI  +P  EL+FLKR F K + G+I APL+  +I SSL ++   
Sbjct: 402 ANLGVTITDGKDKSLATIPARPLLELEFLKRGFKKGNGGLIYAPLEKLSIMSSLVYIR-- 459

Query: 362 KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL-LVD 538
                        S   D++++LV NVN AL+ELYLH D +  + VR F++ +LP     
Sbjct: 460 -------------SDGSDMLQKLVDNVNTALVELYLHQDREYSESVRDFYLEKLPPGSYK 506

Query: 539 QFRTWAFCESFH 574
           +  TW   + FH
Sbjct: 507 ELTTWYEAQIFH 518

[20][TOP]
>UniRef100_Q6W8W5 RNA-directed RNA polymerase n=1 Tax=Arabis mosaic virus strain NW
            RepID=POL1_ARMVN
          Length = 2284

 Score =  138 bits (348), Expect = 3e-31
 Identities = 77/192 (40%), Positives = 113/192 (58%), Gaps = 1/192 (0%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NS+FNE+L+RY Y+K+ P   +  F + V LI YGDDN+ +V+ S  + F G+A++  +
Sbjct: 1801 INSIFNELLMRYCYKKIVPPIYRECFDRCVVLITYGDDNVFTVSQSIMTSFTGDALKAEM 1860

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            A   V ITDG DK   TI  +P  EL+FLKR F K + G+I APL+  +I SSL ++   
Sbjct: 1861 ANLGVTITDGKDKSLATIPARPLLELEFLKRGFKKGNGGLIYAPLEKLSIMSSLVYIR-- 1918

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL-LVD 538
                         S   D++++LV NVN AL+ELYLH D +  + VR F++ +LP     
Sbjct: 1919 -------------SDGSDMLQKLVDNVNTALVELYLHQDREYSESVRDFYLEKLPPGSYK 1965

Query: 539  QFRTWAFCESFH 574
            +  TW   + FH
Sbjct: 1966 ELTTWYEAQIFH 1977

[21][TOP]
>UniRef100_B4YNP7 Polyprotein 1 n=1 Tax=Arabis mosaic virus RepID=B4YNP7_ARMV
          Length = 2285

 Score =  137 bits (345), Expect = 6e-31
 Identities = 75/192 (39%), Positives = 113/192 (58%), Gaps = 1/192 (0%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NS+FNE+L+RY ++K+ P   +  F + V LI YGDDN+ +V+ S    F G+A++  +
Sbjct: 1803 INSIFNELLMRYCFKKIVPPVYRECFDRCVVLITYGDDNVFTVSQSIMESFTGDALKAEM 1862

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            A   V ITDG DK   TI  +P  EL+FLKR   K + G+I APL+  +I SSL ++   
Sbjct: 1863 ANVGVTITDGKDKSLATIPARPLLELEFLKRGIKKGNGGMIYAPLEKLSIMSSLVYIR-- 1920

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL-LVD 538
                         S   D++++LV NVN AL+EL+LH D + F  VR+F++ +LP     
Sbjct: 1921 -------------SDGSDMLQKLVDNVNTALVELFLHQDKEYFDSVRNFYLEKLPPGSYK 1967

Query: 539  QFRTWAFCESFH 574
            +  TW   ++FH
Sbjct: 1968 ELTTWYQAQTFH 1979

[22][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
           RepID=UPI0000163DCE
          Length = 707

 Score =  134 bits (337), Expect = 5e-30
 Identities = 75/170 (44%), Positives = 99/170 (58%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           +NS+FNE LIR+ +R       + RF Q V L++YGDDNLI+V P     FNGE IR  L
Sbjct: 343 LNSIFNEFLIRFVWRTTIIGVPRERFSQYVTLLIYGDDNLIAVHPDYLPHFNGEIIRTRL 402

Query: 182 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
           A+  V ITDGSDK A  IE KP  +LDFLKR+F KL+ G + APLD+ ++++SL  +T  
Sbjct: 403 ADVNVIITDGSDKTAEKIEEKPLVQLDFLKRRFRKLNDGTVYAPLDLASVYTSLQNVTMG 462

Query: 362 KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFF 511
               H                 L  NV+ AL+ELYLH +   F  +R F+
Sbjct: 463 AGSIHI---------------ALQNNVHNALLELYLHGNETWFNHLRDFY 497

[23][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
            RepID=POL1_BRAV
          Length = 2094

 Score =  134 bits (337), Expect = 5e-30
 Identities = 75/170 (44%), Positives = 99/170 (58%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NS+FNE LIR+ +R       + RF Q V L++YGDDNLI+V P     FNGE IR  L
Sbjct: 1730 LNSIFNEFLIRFVWRTTIIGVPRERFSQYVTLLIYGDDNLIAVHPDYLPHFNGEIIRTRL 1789

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            A+  V ITDGSDK A  IE KP  +LDFLKR+F KL+ G + APLD+ ++++SL  +T  
Sbjct: 1790 ADVNVIITDGSDKTAEKIEEKPLVQLDFLKRRFRKLNDGTVYAPLDLASVYTSLQNVTMG 1849

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFF 511
                H                 L  NV+ AL+ELYLH +   F  +R F+
Sbjct: 1850 AGSIHI---------------ALQNNVHNALLELYLHGNETWFNHLRDFY 1884

[24][TOP]
>UniRef100_O37086 RNA1 polyprotein n=1 Tax=Peach rosette mosaic virus
            RepID=O37086_9SECO
          Length = 2150

 Score =  121 bits (304), Expect = 3e-26
 Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 1/176 (0%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NS+FNEILIRY YRK+ P P    F + V L+VYGDDNL+++      +F+G  I+  +
Sbjct: 1781 INSIFNEILIRYVYRKVTPAPACNFFNKYVRLMVYGDDNLLTIKEEVIPFFDGPVIKREM 1840

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 361
            A   + ITDG+DK + T+E KP   L+FLKR F   + G++ APLD T++++ L++L  +
Sbjct: 1841 ASVGITITDGTDKSSLTLERKPLASLEFLKRGFRVQENGLVVAPLDKTSMYTRLFYLPLA 1900

Query: 362  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH-NDSKEFQRVRSFFVARLP 526
               F     +               NV   L E+ LH N  +EF RVR+F+V++ P
Sbjct: 1901 LMAFIPGYFSKG-------------NVKSFLEEIVLHPNHRREFYRVRNFYVSKAP 1943

[25][TOP]
>UniRef100_B9UKJ7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cocoa necrosis
           virus RepID=B9UKJ7_9SECO
          Length = 76

 Score =  111 bits (277), Expect = 5e-23
 Identities = 53/68 (77%), Positives = 61/68 (89%)
 Frame = +2

Query: 17  NEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKV 196
           +EILIRYAY+KLAPKP++  F  +VCL+VYGDDNLISV+PS ASWF GEAIRV LAEKK+
Sbjct: 9   HEILIRYAYKKLAPKPQRNLFGVSVCLLVYGDDNLISVSPSIASWFTGEAIRVCLAEKKI 68

Query: 197 KITDGSDK 220
           KITDGSDK
Sbjct: 69  KITDGSDK 76

[26][TOP]
>UniRef100_B4ZF31 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato black ring
           virus RepID=B4ZF31_9SECO
          Length = 73

 Score =  110 bits (276), Expect = 6e-23
 Identities = 53/64 (82%), Positives = 58/64 (90%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           VNSVFNEILIRYAY+KLAP PE+ RF  TVCL+VYGDDNLISV+PS ASWF GEAIR+TL
Sbjct: 9   VNSVFNEILIRYAYKKLAPVPERNRFGSTVCLLVYGDDNLISVSPSIASWFTGEAIRITL 68

Query: 182 AEKK 193
           AEKK
Sbjct: 69  AEKK 72

[27][TOP]
>UniRef100_Q24M90 Polyprotein 1 n=1 Tax=Raspberry ringspot virus RepID=Q24M90_9SECO
          Length = 2366

 Score =  105 bits (263), Expect = 2e-21
 Identities = 66/187 (35%), Positives = 100/187 (53%), Gaps = 2/187 (1%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLA 184
            NS+FNEIL+R AYR L P  E+  F   V LIVYGDDN++ + P+  S FNG  I+  + 
Sbjct: 1907 NSIFNEILVRCAYRSLVPDIERPFFSNNVVLIVYGDDNVLGIHPNIESVFNGNTIKAYMK 1966

Query: 185  EK-KVKITDGSDKDAPTIEPKPFWELDFLKRKFLK-LDTGVIQAPLDMTAIFSSLYWLTP 358
            E+  +KITDG+DK +P I+ +P  + +FLKR + K    G+ +APL  T+IFS L ++  
Sbjct: 1967 EELGIKITDGADKLSPVIDARPLEQCEFLKRTWRKDRQYGLYRAPLVETSIFSCLRYV-- 2024

Query: 359  SKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVD 538
                     +   Y  +  +++    NV  +L E  LH       R+   F    P  V+
Sbjct: 2025 ---------RLQNYDWQAPLLQ----NVQGSLYEASLHGPEMH-DRIYKHFAMHFPKWVE 2070

Query: 539  QFRTWAF 559
            +   + +
Sbjct: 2071 EHELYTY 2077

[28][TOP]
>UniRef100_B1A4F8 Polyprotein 1 n=1 Tax=Squash mosaic virus RepID=B1A4F8_9SECO
          Length = 1858

 Score =  105 bits (261), Expect = 3e-21
 Identities = 61/162 (37%), Positives = 94/162 (58%), Gaps = 5/162 (3%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNEIL+RY YRK+      P+P    F + V L+ YGDDNLISV+   A+ FNG  +
Sbjct: 1498 NSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGDDNLISVSHVVANVFNGRTL 1557

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
            +  +A+  V ITDG DK +PT+E +     DFLKR F KL+  V  +P + +++++ L++
Sbjct: 1558 KAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLNGLVYDSPEEKSSLWAQLHY 1616

Query: 350  LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 475
            +  +                +D  E  ++N+N  L ELY+H+
Sbjct: 1617 VNTT---------------SLDKQEAYLVNLNNVLKELYMHS 1643

[29][TOP]
>UniRef100_Q6W8W4 RNA-directed RNA polymerase n=1 Tax=Raspberry ringspot virus strain
            cherry RepID=POL1_RRVC
          Length = 2367

 Score =  104 bits (260), Expect = 4e-21
 Identities = 66/187 (35%), Positives = 101/187 (54%), Gaps = 2/187 (1%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLA 184
            NS+FNEIL+R AYR L P+ E+  F   V LIVYGDDN++ + P+  S FNG AI+  + 
Sbjct: 1908 NSIFNEILVRCAYRSLVPEIERPFFSNNVVLIVYGDDNVLGIHPNIESAFNGNAIKAYMK 1967

Query: 185  EK-KVKITDGSDKDAPTIEPKPFWELDFLKRKFLK-LDTGVIQAPLDMTAIFSSLYWLTP 358
            E+  +KITDG+DK +P I  +P  + +FLKR + K    G+ +APL  T+I+S L ++  
Sbjct: 1968 EELGIKITDGADKLSPVICARPLEQCEFLKRTWRKDRQYGLYRAPLVETSIYSCLRYV-- 2025

Query: 359  SKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVD 538
                     +   Y  +  +++    NV  +L E  LH       R+   F    P  V+
Sbjct: 2026 ---------RLQNYDWQAPLLQ----NVQGSLYEASLHGPDMH-ARIYKHFATHFPKWVE 2071

Query: 539  QFRTWAF 559
            +   + +
Sbjct: 2072 EHELYTY 2078

[30][TOP]
>UniRef100_UPI0000163D09 RNA-dependent RNA polymerase n=1 Tax=Squash mosaic virus
           RepID=UPI0000163D09
          Length = 711

 Score =  103 bits (257), Expect = 1e-20
 Identities = 60/162 (37%), Positives = 94/162 (58%), Gaps = 5/162 (3%)
 Frame = +2

Query: 5   NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
           NS+FNEIL+RY YRK+      P+P    F + V L+ YGDDNLISV+   AS FNG  +
Sbjct: 351 NSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGDDNLISVSHVVASVFNGRTL 410

Query: 170 RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
           +  +A+  V ITDG DK +PT+E +     DFLKR F KL+  +  +P + +++++ L++
Sbjct: 411 KAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLNGLIYDSPEEKSSLWAQLHY 469

Query: 350 LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 475
           +  +                +D  E  ++N+N  L ELY+++
Sbjct: 470 VNTT---------------NLDKQEAYLVNLNNVLKELYMYS 496

[31][TOP]
>UniRef100_Q91PR6 Polyprotein n=1 Tax=Squash mosaic virus RepID=Q91PR6_9SECO
          Length = 1858

 Score =  103 bits (257), Expect = 1e-20
 Identities = 60/162 (37%), Positives = 94/162 (58%), Gaps = 5/162 (3%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNEIL+RY YRK+      P+P    F + V L+ YGDDNLISV+   AS FNG  +
Sbjct: 1498 NSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGDDNLISVSHVVASVFNGRTL 1557

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
            +  +A+  V ITDG DK +PT+E +     DFLKR F KL+  +  +P + +++++ L++
Sbjct: 1558 KAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLNGLIYDSPEEKSSLWAQLHY 1616

Query: 350  LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 475
            +  +                +D  E  ++N+N  L ELY+++
Sbjct: 1617 VNTT---------------NLDKQEAYLVNLNNVLKELYMYS 1643

[32][TOP]
>UniRef100_Q3L2Z2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z2_9SECO
          Length = 1851

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 67/197 (34%), Positives = 105/197 (53%), Gaps = 6/197 (3%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNE+LIRY+Y KL     AP      F+  + L VYGDDNLISV      +F+G  +
Sbjct: 1491 NSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFISLCVYGDDNLISVHEYVKPYFSGSKL 1550

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
            +  LA   + ITDG DK + T++ +   E DFLKR F ++   +  AP D  +++S L++
Sbjct: 1551 KSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMSNVLWVAPEDKASLWSQLHY 1610

Query: 350  LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL 529
            ++                  +++ E  ++N+   L ELYLH+  +E +++R   ++R+  
Sbjct: 1611 VS---------------CNNLEMQEAYLVNLVNVLRELYLHS-PEEARQLRRKALSRIEW 1654

Query: 530  LVD-QFRTWAFCESFHS 577
            L      T A  E FHS
Sbjct: 1655 LQKADVPTIAQIEEFHS 1671

[33][TOP]
>UniRef100_Q02941 RNA-directed RNA polymerase (Fragment) n=1 Tax=Andean potato mottle
           virus RepID=POL1_APMV
          Length = 729

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 62/182 (34%), Positives = 100/182 (54%), Gaps = 5/182 (2%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPK----PEKCR-FQQTVCLIVYGDDNLISVAPSCASWFNGEA 166
           +N +FNE+L+RY ++K+  +    P +C  F   +  +VYGDDNLISV+P     FNG+ 
Sbjct: 374 MNGIFNELLVRYCFKKIMREGGATPLECSAFDSYIRFVVYGDDNLISVSPVIHDKFNGKL 433

Query: 167 IRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLY 346
           ++  +A   V ITDG DK  PT+E +P  + DFLKR F++    V  AP + +++++ L+
Sbjct: 434 LKECMARFGVTITDGKDKTLPTLEFRPLEDCDFLKRGFIQRSELVWDAPEERSSLYTQLH 493

Query: 347 WLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLP 526
           +++              Y+G +         VNV + ELY+H+  KE   +R   +  LP
Sbjct: 494 YVSTKMQSLE-----DAYTGNL---------VNV-IRELYMHS-PKEASDLRRKALRDLP 537

Query: 527 LL 532
            L
Sbjct: 538 WL 539

[34][TOP]
>UniRef100_Q8JUF2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF2_9SECO
          Length = 1851

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 67/197 (34%), Positives = 103/197 (52%), Gaps = 6/197 (3%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNE+LIRY+Y KL     AP      F+  + L VYGDDNLISV      +F+G  +
Sbjct: 1491 NSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFISLCVYGDDNLISVHEYVKPYFSGSKL 1550

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
            +  LA   + ITDG DK + T++ +   E DFLKR F ++   +  AP D  +++S L++
Sbjct: 1551 KSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMSNVLWVAPEDKASLWSQLHY 1610

Query: 350  LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL 529
            ++                  +++ E  ++N+   L ELYLH+  +  Q +R   ++R+  
Sbjct: 1611 VS---------------CNNLEMQEAYLVNLVNVLRELYLHSPEEACQ-LRRRALSRIEW 1654

Query: 530  LVD-QFRTWAFCESFHS 577
            L      T A  E FHS
Sbjct: 1655 LQKADVPTIAQIEEFHS 1671

[35][TOP]
>UniRef100_UPI0000163CF4 putative RNA dependent RNA polymerase n=1 Tax=Bean pod mottle virus
           RepID=UPI0000163CF4
          Length = 710

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 6/197 (3%)
 Frame = +2

Query: 5   NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
           NS+FNE+LIRY+Y KL     AP      F+  + L VYGDDNLISV      +F+G  +
Sbjct: 350 NSIFNEMLIRYSYEKLLRQAKAPSMFLQSFRNFISLCVYGDDNLISVHEYVKPYFSGSKL 409

Query: 170 RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
           +  LA   + ITDG DK + T++ +   E DFLKR F ++   +  AP D  +++S L++
Sbjct: 410 KSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMSNVLWVAPEDKASLWSQLHY 469

Query: 350 LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL 529
           ++                  +++ E  ++N+   L ELYLH+  +E +R+R   ++ +  
Sbjct: 470 VS---------------CNNLEMQEAYLVNLVNVLRELYLHS-PEEARRLRRKALSCIEW 513

Query: 530 LVD-QFRTWAFCESFHS 577
           L      T A  E FHS
Sbjct: 514 LQKADVPTIAQIEEFHS 530

[36][TOP]
>UniRef100_Q8JUF5 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF5_9SECO
          Length = 1851

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 67/197 (34%), Positives = 105/197 (53%), Gaps = 6/197 (3%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNE+LIRY+Y KL     AP      F+  V L VYGDDNLISV      +F+G  +
Sbjct: 1491 NSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFVSLCVYGDDNLISVHEYVKPYFSGSKL 1550

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
            +  LA   + ITDG DK + T++ +   + DFLKR F ++   +  AP D  +++S L++
Sbjct: 1551 KSFLAGHNITITDGIDKTSATLQFRKLADCDFLKRNFKQMSNVLWVAPEDKASLWSQLHY 1610

Query: 350  LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL 529
            ++                  +++ E  ++N+   L ELYLH+  +E +++R   ++R+  
Sbjct: 1611 VS---------------CNNLEMQEAYLVNLVNVLRELYLHS-PEEARQLRRKALSRIEW 1654

Query: 530  LVD-QFRTWAFCESFHS 577
            L      T A  E FHS
Sbjct: 1655 LQKADVPTIAQIEEFHS 1671

[37][TOP]
>UniRef100_Q9YJU5 RNA-directed RNA polymerase n=1 Tax=Bean-pod mottle virus (strain
            Kentucky G7) RepID=POL1_BPMV
          Length = 1850

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 6/197 (3%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNE+LIRY+Y KL     AP      F+  + L VYGDDNLISV      +F+G  +
Sbjct: 1490 NSIFNEMLIRYSYEKLLRQAKAPSMFLQSFRNFISLCVYGDDNLISVHEYVKPYFSGSKL 1549

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
            +  LA   + ITDG DK + T++ +   E DFLKR F ++   +  AP D  +++S L++
Sbjct: 1550 KSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMSNVLWVAPEDKASLWSQLHY 1609

Query: 350  LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL 529
            ++                  +++ E  ++N+   L ELYLH+  +E +R+R   ++ +  
Sbjct: 1610 VS---------------CNNLEMQEAYLVNLVNVLRELYLHS-PEEARRLRRKALSCIEW 1653

Query: 530  LVD-QFRTWAFCESFHS 577
            L      T A  E FHS
Sbjct: 1654 LQKADVPTIAQIEEFHS 1670

[38][TOP]
>UniRef100_Q3L2Z1 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z1_9SECO
          Length = 1851

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 6/197 (3%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNE+LIRY+Y KL     AP      F+  V L VYGDDN ISV      +F+G  +
Sbjct: 1491 NSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFVSLCVYGDDNFISVHEYVKPYFSGSKL 1550

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
            +  LA   + ITDG DK + T++ +   + DFLKR F ++   +  AP D  +++S L++
Sbjct: 1551 KSFLAGHNITITDGIDKTSATLQFRKLADCDFLKRNFKQMSNVLWVAPEDKASLWSQLHY 1610

Query: 350  LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL 529
            ++                  +++ E  ++N+   L ELYLH+  +E +++R   ++R+  
Sbjct: 1611 VS---------------CNNLEMQEAYLVNLVNVLRELYLHS-PEEARQLRRKALSRIEW 1654

Query: 530  LVD-QFRTWAFCESFHS 577
            L      T A  E FHS
Sbjct: 1655 LQKADVPTIAQIEEFHS 1671

[39][TOP]
>UniRef100_UPI0000163D14 RNA-dependent RNA polymerase n=1 Tax=Cowpea mosaic virus
           RepID=UPI0000163D14
          Length = 711

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 62/172 (36%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEA 166
           VNS+FNEILIRY Y+KL     AP+     F + + L+ YGDDNLISV      +F+G+ 
Sbjct: 349 VNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLIGLVTYGDDNLISVNAVVTPYFDGKK 408

Query: 167 IRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLY 346
           ++ +LA+  V ITDG DK +  +  +   E DFLKR F++  + +  AP D  +++S L+
Sbjct: 409 LKQSLAQGGVTITDGKDKTSLELPFRRLEECDFLKRTFVQRSSTIWDAPEDKASLWSQLH 468

Query: 347 WLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQR 496
           ++       +  +K   Y          + NV   L ELY+H+  ++ EF+R
Sbjct: 469 YV-----NCNNCEKEVAY----------LTNVVNVLRELYMHSPREATEFRR 505

[40][TOP]
>UniRef100_P03600 RNA-directed RNA polymerase n=1 Tax=Cowpea mosaic virus
            RepID=POL1_CPMV
          Length = 1866

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 62/172 (36%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEA 166
            VNS+FNEILIRY Y+KL     AP+     F + + L+ YGDDNLISV      +F+G+ 
Sbjct: 1504 VNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLIGLVTYGDDNLISVNAVVTPYFDGKK 1563

Query: 167  IRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLY 346
            ++ +LA+  V ITDG DK +  +  +   E DFLKR F++  + +  AP D  +++S L+
Sbjct: 1564 LKQSLAQGGVTITDGKDKTSLELPFRRLEECDFLKRTFVQRSSTIWDAPEDKASLWSQLH 1623

Query: 347  WLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQR 496
            ++       +  +K   Y          + NV   L ELY+H+  ++ EF+R
Sbjct: 1624 YV-----NCNNCEKEVAY----------LTNVVNVLRELYMHSPREATEFRR 1660

[41][TOP]
>UniRef100_B5L2C4 Polyprotein n=1 Tax=Mikania micrantha mosaic virus RepID=B5L2C4_9SECO
          Length = 1853

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 61/179 (34%), Positives = 88/179 (49%), Gaps = 2/179 (1%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
            VNS+ NEIL++YAYR         R  F   V L+VYGDDNLISV+ + +S FNGE +  
Sbjct: 1498 VNSILNEILVKYAYRMCFADNPMIRESFDTHVALVVYGDDNLISVSDAISSKFNGEFLVD 1557

Query: 176  TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
                  + +TDG DK    I  +   + DFLKR F  L  G    P+   +++  L+++ 
Sbjct: 1558 FFLRLSITVTDGVDKTKQGISFRKLTDCDFLKRNFKVLPDGEWVGPMSRESLWPQLHFVR 1617

Query: 356  PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLL 532
              K               +++ +  V N+N  L EL+LH  S+E   +R   V  L  L
Sbjct: 1618 AKK---------------LEMADAYVANLNNILRELWLHG-SEEVTELRRMAVKTLKWL 1660

[42][TOP]
>UniRef100_UPI000180D482 RNA-dependent RNA polymerase n=1 Tax=Mikania micrantha mosaic virus
           RepID=UPI000180D482
          Length = 474

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 60/176 (34%), Positives = 87/176 (49%), Gaps = 2/176 (1%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
           VNS+ NEIL++YAYR         R  F   V L+VYGDDNLISV+ + +S FNGE +  
Sbjct: 313 VNSILNEILVKYAYRMCFADNPMIRESFDTHVALVVYGDDNLISVSDAISSKFNGEFLVD 372

Query: 176 TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
                 + +TDG DK    I  +   + DFLKR F  L  G    P+   +++  L+++ 
Sbjct: 373 FFLRLSITVTDGVDKTKQGISFRKLTDCDFLKRNFKVLPDGEWVGPMSRESLWPQLHFVR 432

Query: 356 PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARL 523
             K               +++ +  V N+N  L EL+LH  S+E   +R   V  L
Sbjct: 433 AKK---------------LEMADAYVANLNNILRELWLHG-SEEVTELRRMAVKTL 472

[43][TOP]
>UniRef100_UPI0000163D04 RNA-dependent RNA polymerase n=1 Tax=Red clover mottle virus
           RepID=UPI0000163D04
          Length = 713

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 50/157 (31%), Positives = 88/157 (56%), Gaps = 5/157 (3%)
 Frame = +2

Query: 5   NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
           NS+FNEIL+RY Y+ L     AP      F+  + ++ YGDDNLISV      +F+G  +
Sbjct: 351 NSIFNEILVRYHYKLLLQEHNAPNMYVQSFKNLISMVTYGDDNLISVNAVVKPYFDGTKL 410

Query: 170 RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
           +  +A   + ITDG DK + T+E +   + DFLKR FLK  + +  AP +  ++++ L++
Sbjct: 411 KQAMARNGIIITDGKDKTSATLEFRRLEDCDFLKRGFLKRSSVLWDAPEEKASLWAQLHY 470

Query: 350 LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 460
           +  +    +   + +  +  V+V+ EL ++    ++E
Sbjct: 471 VNVN----NCEMQVAYMTNLVNVLRELYMHDPTEMVE 503

[44][TOP]
>UniRef100_P35930 RNA-directed RNA polymerase n=1 Tax=Red clover mottle virus
            RepID=POL1_RCMV
          Length = 1864

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 50/157 (31%), Positives = 88/157 (56%), Gaps = 5/157 (3%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNEIL+RY Y+ L     AP      F+  + ++ YGDDNLISV      +F+G  +
Sbjct: 1502 NSIFNEILVRYHYKLLLQEHNAPNMYVQSFKNLISMVTYGDDNLISVNAVVKPYFDGTKL 1561

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
            +  +A   + ITDG DK + T+E +   + DFLKR FLK  + +  AP +  ++++ L++
Sbjct: 1562 KQAMARNGIIITDGKDKTSATLEFRRLEDCDFLKRGFLKRSSVLWDAPEEKASLWAQLHY 1621

Query: 350  LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 460
            +  +    +   + +  +  V+V+ EL ++    ++E
Sbjct: 1622 VNVN----NCEMQVAYMTNLVNVLRELYMHDPTEMVE 1654

[45][TOP]
>UniRef100_Q06RG7 Polymerase (Fragment) n=1 Tax=Turnip ringspot virus
           RepID=Q06RG7_9SECO
          Length = 396

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 9/195 (4%)
 Frame = +2

Query: 5   NSVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
           NS+FNEILIRY+++ +  K +        F + V ++ YGDDNL+SV+     +F+G+ +
Sbjct: 152 NSIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGDDNLLSVSEVVKPYFDGKRL 211

Query: 170 RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVI-QAPLDMTAIFSSLY 346
           +  LA+ KV ITDG DK +P +  +   + DFLKR F K   G+   AP +  ++++ L+
Sbjct: 212 KEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDKNGIFWNAPEEKESLWAQLH 271

Query: 347 WLTPSKDKFHTHQKASQYSGEVDVIEELVL---NVNVALMELYLHNDSKEFQRVRSFFVA 517
           ++  +  + H   K +     V+V+ EL +   N   AL +       K  QRV     +
Sbjct: 272 YINVTNLEQHEAYKTNL----VNVLRELYMWDVNECSALRK-------KALQRVEWLVPS 320

Query: 518 RLPLLVDQFRTWAFC 562
            LP +      +A C
Sbjct: 321 DLPTVAQIEEWYATC 335

[46][TOP]
>UniRef100_C9WI17 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C9WI17_9SECO
          Length = 1857

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 9/195 (4%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNEILIRY+++ +  K +        F + V ++ YGDDNL+SV+     +F+G+ +
Sbjct: 1496 NSIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGDDNLLSVSEVVKPYFDGKRL 1555

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVI-QAPLDMTAIFSSLY 346
            +  LA+ KV ITDG DK +P +  +   + DFLKR F K   G+   AP +  ++++ L+
Sbjct: 1556 KEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDKNGIFWNAPEEKESLWAQLH 1615

Query: 347  WLTPSKDKFHTHQKASQYSGEVDVIEELVL---NVNVALMELYLHNDSKEFQRVRSFFVA 517
            ++  +  + H   K +     V+V+ EL +   N   AL +       K  QRV     +
Sbjct: 1616 YINVTNLEQHEAYKTNL----VNVLRELYMWDVNECSALRK-------KALQRVEWLVPS 1664

Query: 518  RLPLLVDQFRTWAFC 562
             LP +      +A C
Sbjct: 1665 DLPTVAQIEEWYATC 1679

[47][TOP]
>UniRef100_C7SW00 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C7SW00_9SECO
          Length = 1860

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 9/195 (4%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNEILIRY+++ +  K +        F + V ++ YGDDNL+SV+     +F+G+ +
Sbjct: 1499 NSIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGDDNLLSVSEVVKPYFDGKRL 1558

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVI-QAPLDMTAIFSSLY 346
            +  LA+ KV ITDG DK +P +  +   + DFLKR F K   G+   AP +  ++++ L+
Sbjct: 1559 KEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDKNGIFWNAPEEKESLWAQLH 1618

Query: 347  WLTPSKDKFHTHQKASQYSGEVDVIEELVL---NVNVALMELYLHNDSKEFQRVRSFFVA 517
            ++  +  + H   K +     V+V+ EL +   N   AL +       K  QRV     +
Sbjct: 1619 YINVTNLEQHEAYKTNL----VNVLRELYMWDVNECSALRK-------KALQRVEWLVPS 1667

Query: 518  RLPLLVDQFRTWAFC 562
             LP +      +A C
Sbjct: 1668 DLPTVAQIEEWYATC 1682

[48][TOP]
>UniRef100_Q4W8R6 Polyprotein n=1 Tax=Gentian mosaic virus RepID=Q4W8R6_9SECO
          Length = 1853

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
            VNS+ NEIL++YA+R         R  F   V L+VYGDDNLISV+ + ++ FNGE +  
Sbjct: 1498 VNSILNEILVKYAFRMCFADNPMVRESFDTHVSLVVYGDDNLISVSDAISAKFNGEFLVD 1557

Query: 176  TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
               +  + +TDG DK    I  +   + DFLKR F  L  G    P+   +++  L+++ 
Sbjct: 1558 FFLKLSITVTDGVDKTKKGISFRRLADCDFLKRGFKNLPDGEWIGPMSRESLWPQLHFVR 1617

Query: 356  PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH--NDSKEFQR 496
              K               +++ +  V N+N  L EL+LH  N++ E +R
Sbjct: 1618 AKK---------------LEMADAYVANLNNILRELWLHSANEATELRR 1651

[49][TOP]
>UniRef100_UPI0000163DDB RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 2
           RepID=UPI0000163DDB
          Length = 697

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
 Frame = +2

Query: 2   VNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
           VNS+ NEIL++YAY    A  P  +  F   V ++VYGDDNLISV+ + +S F+G  +  
Sbjct: 347 VNSILNEILVKYAYWHCFADNPTVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGNFLVK 406

Query: 176 TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
            +    +K+TDG DK    IE +     DFLKR F     G  + P+   +++  L+++ 
Sbjct: 407 FMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMNPDGTWRCPMSKESLWPQLHYVK 466

Query: 356 PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 493
             K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 467 AKK---------------LEMAEAYINNCNNILRELWLHDVAEAKEFR 499

[50][TOP]
>UniRef100_Q997D0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q997D0_9SECO
          Length = 1869

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
 Frame = +2

Query: 2    VNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
            VNS+ NEIL++YAY    A  P  +  F   V ++VYGDDNLISV+ + +S F+G  +  
Sbjct: 1519 VNSILNEILVKYAYWHCFADNPTVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGNFLVK 1578

Query: 176  TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
             +    +K+TDG DK    IE +     DFLKR F     G  + P+   +++  L+++ 
Sbjct: 1579 FMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMNPDGTWRCPMSKESLWPQLHYVK 1638

Query: 356  PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 493
              K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 1639 AKK---------------LEMAEAYINNCNNILRELWLHDVAEAKEFR 1671

[51][TOP]
>UniRef100_UPI0000163DD4 RNA-dependent RNA polymerase n=1 Tax=Patchouli mild mosaic virus
           RepID=UPI0000163DD4
          Length = 699

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
 Frame = +2

Query: 2   VNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
           VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +  
Sbjct: 349 VNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGSFLVS 408

Query: 176 TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
            +    +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++ 
Sbjct: 409 FMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVK 468

Query: 356 PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 493
             K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 469 AKK---------------LEMAEAYINNCNNILRELWLHDVKEAKEFR 501

[52][TOP]
>UniRef100_Q9YM10 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9YM10_9SECO
          Length = 1870

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
 Frame = +2

Query: 2    VNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
            VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +  
Sbjct: 1520 VNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGSFLVS 1579

Query: 176  TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
             +    +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++ 
Sbjct: 1580 FMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVK 1639

Query: 356  PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 493
              K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 1640 AKK---------------LEMAEAYINNCNNILRELWLHDVKEAKEFR 1672

[53][TOP]
>UniRef100_Q9WP48 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WP48_9SECO
          Length = 1769

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
 Frame = +2

Query: 2    VNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
            VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +  
Sbjct: 1419 VNSILNEILVKYAYWHCFEDNPNVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGSFLVS 1478

Query: 176  TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
             +    +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++ 
Sbjct: 1479 FMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVK 1538

Query: 356  PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 493
              K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 1539 AKK---------------LEMAEAYINNCNNILRELWLHDVREAKEFR 1571

[54][TOP]
>UniRef100_Q8V978 Polyprotein n=1 Tax=Patchouli mild mosaic virus RepID=Q8V978_9SECO
          Length = 1870

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
 Frame = +2

Query: 2    VNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
            VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +  
Sbjct: 1520 VNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGSFLVS 1579

Query: 176  TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
             +    +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++ 
Sbjct: 1580 FMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVK 1639

Query: 356  PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 493
              K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 1640 AKK---------------LEMAEAYINNCNNILRELWLHDVKEAKEFR 1672

[55][TOP]
>UniRef100_D0E0G9 Polyprotein n=1 Tax=Turnip ringspot virus RepID=D0E0G9_9SECO
          Length = 1860

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 9/195 (4%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNEILIRY+++ +      P      F + V ++ YGDDNL+SV+     +F+G+ +
Sbjct: 1499 NSIFNEILIRYSFKAIMREQKVPDLIPISFDKYVGMVTYGDDNLLSVSEVVKPFFDGKRL 1558

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVI-QAPLDMTAIFSSLY 346
            +  LA+ KV ITDG DK +P +  +   + DFLKR F K  +G    +P +  ++++ L+
Sbjct: 1559 KEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFKKDRSGFFWNSPEEKESLWAQLH 1618

Query: 347  WLTPSKDKFHTHQKASQYSGEVDVIEELV---LNVNVALMELYLHNDSKEFQRVRSFFVA 517
            ++  +  + H   K +     V+V+ EL    +N   AL +       K  QRV     +
Sbjct: 1619 YINVTNLEQHEAYKTNL----VNVLRELYMWDINECAALRK-------KALQRVSWLLPS 1667

Query: 518  RLPLLVDQFRTWAFC 562
             LP +    + +A C
Sbjct: 1668 DLPTVAQIEKWYASC 1682

[56][TOP]
>UniRef100_B8Y619 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Broad bean wilt
           virus 2 RepID=B8Y619_9SECO
          Length = 594

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
 Frame = +2

Query: 2   VNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
           VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +  
Sbjct: 244 VNSILNEILVKYAYWHCFGDNPSVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGSFLVS 303

Query: 176 TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
            +    +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++ 
Sbjct: 304 FMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVK 363

Query: 356 PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 493
             K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 364 AKK---------------LEMAEAYINNCNNILCELWLHDVKEAKEFR 396

[57][TOP]
>UniRef100_B2KL92 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Turnip ringspot
           virus RepID=B2KL92_9SECO
          Length = 712

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 9/195 (4%)
 Frame = +2

Query: 5   NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
           NS+FNEILIRY+++ +      P      F + V ++ YGDDNL+SV+     +F+G+ +
Sbjct: 351 NSIFNEILIRYSFKAIMREQKVPDLIPISFDKYVGMVTYGDDNLLSVSEVVKPFFDGKRL 410

Query: 170 RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVI-QAPLDMTAIFSSLY 346
           +  LA+ KV ITDG DK +P +  +   + DFLKR F K  +G    +P +  ++++ L+
Sbjct: 411 KEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFKKDRSGFFWNSPEEKESLWAQLH 470

Query: 347 WLTPSKDKFHTHQKASQYSGEVDVIEELV---LNVNVALMELYLHNDSKEFQRVRSFFVA 517
           ++  +  + H   K +     V+V+ EL    +N   AL +       K  QRV     +
Sbjct: 471 YINVTNLEQHEAYKTNL----VNVLRELYMWDINECAALRK-------KALQRVSWLLPS 519

Query: 518 RLPLLVDQFRTWAFC 562
            LP +    + +A C
Sbjct: 520 DLPTVAQIEKWYASC 534

[58][TOP]
>UniRef100_Q9WNW0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WNW0_9SECO
          Length = 1870

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 2/170 (1%)
 Frame = +2

Query: 2    VNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
            VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +  
Sbjct: 1520 VNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLISVSDAISSRFDGNFLVS 1579

Query: 176  TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
             +    +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++ 
Sbjct: 1580 FMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVK 1639

Query: 356  PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRS 505
              K               +++ E  + N N  L EL+LH D KE +  R+
Sbjct: 1640 AKK---------------LEMAEAYINNCNNILRELWLH-DVKEAEEFRN 1673

[59][TOP]
>UniRef100_Q2TCK2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Radish mosaic virus
           RepID=Q2TCK2_9SECO
          Length = 709

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 6/197 (3%)
 Frame = +2

Query: 5   NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
           NS+FNEILIRY+++ +      P      F + V ++VYGDDNL+SV+     +F+G+ +
Sbjct: 353 NSIFNEILIRYSFKAILRSQKVPDMVSVSFDEYVSMVVYGDDNLLSVSEVIKPYFDGKRL 412

Query: 170 RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
           +  LA  ++ ITDG DK +P ++ +   + DFLKR F                    LYW
Sbjct: 413 KEFLATLRITITDGKDKTSPFLQFRCLEDCDFLKRGFKN----------------RGLYW 456

Query: 350 LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL 529
             P + +    Q     +  ++  E    N+   L EL++  D KE   +R   + R+  
Sbjct: 457 DAPEEKESLWAQLHYVNANNLEKHEAYKTNLVTVLRELFMW-DKKECAELRRKALQRISW 515

Query: 530 LV-DQFRTWAFCESFHS 577
           LV    +T A  E++++
Sbjct: 516 LVPSDLQTVAQIEAWYA 532

[60][TOP]
>UniRef100_C0IQ96 Polyprotein n=1 Tax=Radish mosaic virus RepID=C0IQ96_9SECO
          Length = 1853

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 6/197 (3%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNEILIRY+++ +      P      F + V ++VYGDDNL+SV+     +F+G+ +
Sbjct: 1497 NSIFNEILIRYSFKAILRSQKVPDMVSVSFDEYVSMVVYGDDNLLSVSEVIKPYFDGKRL 1556

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
            +  LA  ++ ITDG DK +P ++ +   + DFLKR F                    LYW
Sbjct: 1557 KEFLATLRITITDGKDKTSPFLQFRCLEDCDFLKRGFKN----------------RGLYW 1600

Query: 350  LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL 529
              P + +    Q     +  ++  E    N+   L EL++  D KE   +R   + R+  
Sbjct: 1601 DAPEEKESLWAQLHYVNANNLEKHEAYKTNLVTVLRELFMW-DKKECAELRRKALQRISW 1659

Query: 530  LV-DQFRTWAFCESFHS 577
            LV    +T A  E++++
Sbjct: 1660 LVPSDLQTVAQIEAWYA 1676

[61][TOP]
>UniRef100_UPI0000231CC7 RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 1
           RepID=UPI0000231CC7
          Length = 699

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
           VNS+ NEILI+YAY K        R  F   V ++VYGDDNLISV+ + +S FNG  +  
Sbjct: 349 VNSILNEILIKYAYWKCFETESLIRDHFDTYVAMVVYGDDNLISVSEAISSKFNGNFLVN 408

Query: 176 TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
            +    +K+TDG DK    IE +   + DFLKRKF +   G     +    ++  L+++ 
Sbjct: 409 FMCNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKFKENADGTWSGVMAEEHLWPQLHFVK 468

Query: 356 PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSK 484
             K               V++ E  + N N  L EL+L +  K
Sbjct: 469 AKK---------------VEMSEAYISNCNNILRELWLGSPEK 496

[62][TOP]
>UniRef100_UPI0000163CFC RNA-dependent RNA polymerase n=1 Tax=Cowpea severe mosaic virus
           RepID=UPI0000163CFC
          Length = 712

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
 Frame = +2

Query: 5   NSVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
           NS+FNE+L+RY+Y K+      P      F   V ++ YGDDNL+SV  +    F+G  +
Sbjct: 349 NSIFNELLVRYSYIKICQQARVPATITYGFSTFVKMVTYGDDNLLSVQSAITHVFDGTKL 408

Query: 170 RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
           +  L    + ITDG DK +P +  +   + DFLKR F K    V   P +  ++++ L++
Sbjct: 409 KEFLKLNGITITDGKDKTSPVLNFRNLEDCDFLKRGFKKESDVVWVGPEEKESLWAQLHY 468

Query: 350 LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVR 502
           +T +  + H               E  ++NV   + ELYLH D +E   +R
Sbjct: 469 VTTNNLEKH---------------EAYLVNVVNVIRELYLH-DPREAAELR 503

[63][TOP]
>UniRef100_Q998P7 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q998P7_9SECO
          Length = 1869

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 4/168 (2%)
 Frame = +2

Query: 2    VNSVFNEILIRYAY-RKLAPKP-EKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
            VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +  
Sbjct: 1519 VNSILNEILVKYAYWHCFVDNPIVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGNFLVK 1578

Query: 176  TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
             +    +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++ 
Sbjct: 1579 FMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKLNPDGTWRSPMSKESLWPQLHYVK 1638

Query: 356  PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 493
              K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 1639 AKK---------------LEMAEAYINNCNNILRELWLHDVIEAKEFR 1671

[64][TOP]
>UniRef100_Q76L40 Polyprotein n=1 Tax=Broad bean wilt virus 1 RepID=Q76L40_BBWV1
          Length = 1842

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
            VNS+ NEILI+YAY K        R  F   V ++VYGDDNLISV+ + +S FNG  +  
Sbjct: 1492 VNSILNEILIKYAYWKCFETESLIRDHFDTYVAMVVYGDDNLISVSEAISSKFNGNFLVN 1551

Query: 176  TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
             +    +K+TDG DK    IE +   + DFLKRKF +   G     +    ++  L+++ 
Sbjct: 1552 FMCNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKFKENADGTWSGVMAEEHLWPQLHFVK 1611

Query: 356  PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSK 484
              K               V++ E  + N N  L EL+L +  K
Sbjct: 1612 AKK---------------VEMSEAYISNCNNILRELWLGSPEK 1639

[65][TOP]
>UniRef100_P36312 RNA-directed RNA polymerase n=1 Tax=Cowpea severe mosaic virus
            (strain DG) RepID=POL1_CPSMV
          Length = 1858

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNE+L+RY+Y K+      P      F   V ++ YGDDNL+SV  +    F+G  +
Sbjct: 1495 NSIFNELLVRYSYIKICQQARVPATITYGFSTFVKMVTYGDDNLLSVQSAITHVFDGTKL 1554

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 349
            +  L    + ITDG DK +P +  +   + DFLKR F K    V   P +  ++++ L++
Sbjct: 1555 KEFLKLNGITITDGKDKTSPVLNFRNLEDCDFLKRGFKKESDVVWVGPEEKESLWAQLHY 1614

Query: 350  LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVR 502
            +T +  + H               E  ++NV   + ELYLH D +E   +R
Sbjct: 1615 VTTNNLEKH---------------EAYLVNVVNVIRELYLH-DPREAAELR 1649

[66][TOP]
>UniRef100_O12662 RNA polymerase n=1 Tax=Broad bean wilt virus 2 RepID=O12662_9SECO
          Length = 280

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 4/167 (2%)
 Frame = +2

Query: 2   VNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
           VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +  
Sbjct: 125 VNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGSFLVS 184

Query: 176 TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
            +    +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++ 
Sbjct: 185 FMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVK 244

Query: 356 PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEF 490
             K               +++ E  + N N  L EL+LH+  ++K+F
Sbjct: 245 AKK---------------LEMAEAYINNCNNILRELWLHDVKEAKDF 276

[67][TOP]
>UniRef100_Q3MKX9 Polyprotein 1 n=1 Tax=Broad bean wilt virus 1 RepID=Q3MKX9_BBWV1
          Length = 1842

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 56/163 (34%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 175
            VNS+ NEILI+YAY K        R  F   V + VYGDDNLISV+ + +S FNG  +  
Sbjct: 1492 VNSILNEILIKYAYWKCFETESLIRDHFDTHVAMAVYGDDNLISVSEAISSRFNGNFLVN 1551

Query: 176  TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 355
             +A   +K+TDG DK    IE +     DFLKR+F +   G     +    ++  L+++ 
Sbjct: 1552 FMANLGIKVTDGVDKTKIGIEFRTIENCDFLKRRFKENTDGTWSGVMAEEHLWPQLHFVK 1611

Query: 356  PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSK 484
              K               V++ E  + N N  L EL+L +  K
Sbjct: 1612 AKK---------------VEMSEAYISNCNNILRELWLEDPGK 1639

[68][TOP]
>UniRef100_A7M6L1 Polyprotein n=1 Tax=Radish mosaic virus RepID=A7M6L1_9SECO
          Length = 1853

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 50/150 (33%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNEILIRY+++ +      P      F + V ++VYGDDNL+SV+     +F+G+ +
Sbjct: 1497 NSIFNEILIRYSFKAILRSQKIPDMIPVSFDEYVSMVVYGDDNLLSVSEVIKPYFDGKRL 1556

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVI-QAPLDMTAIFSSLY 346
            +  LA   + ITDG DK +P ++ +   + DFLKR F   + G+   AP D  ++++ L+
Sbjct: 1557 KDFLATLHITITDGKDKTSPFLQFRRLEDCDFLKRGF--KNRGLYWDAPEDKESLWAQLH 1614

Query: 347  WLTPSKDKFHTHQKASQYSGEVDVIEELVL 436
            ++  +  + H   K +     V V+ EL +
Sbjct: 1615 YVNANNLEKHEAYKTNL----VTVLRELFM 1640

[69][TOP]
>UniRef100_B4ZF30 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cycas necrotic
           stunt virus RepID=B4ZF30_CNSV
          Length = 73

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/73 (53%), Positives = 50/73 (68%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           +NSV NEIL+RY ++ L   P++  F   V L+VYGDDNL+S     A +FNGE I+ TL
Sbjct: 1   INSVLNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNLMSCTDKIAIYFNGETIKETL 60

Query: 182 AEKKVKITDGSDK 220
            +K V ITDGSDK
Sbjct: 61  KKKNVTITDGSDK 73

[70][TOP]
>UniRef100_B6ZKN4 RNA1-polyprotein n=1 Tax=Radish mosaic virus RepID=B6ZKN4_9SECO
          Length = 1853

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 49/150 (32%), Positives = 84/150 (56%), Gaps = 6/150 (4%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
            NS+FNEILIRY+++ +      P      F + V ++VYGDDNL+SV      +F+G+ +
Sbjct: 1497 NSIFNEILIRYSFKAILRSQKIPDMISVSFDEYVSMVVYGDDNLLSVNEVIKPYFDGKRL 1556

Query: 170  RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVI-QAPLDMTAIFSSLY 346
            +  LA   + ITDG DK +P ++ +   + DFLKR F   + G+   AP +  ++++ L+
Sbjct: 1557 KEFLATLHITITDGKDKTSPFLQFRCLEDCDFLKRGF--KNRGLYWDAPEEKESLWAQLH 1614

Query: 347  WLTPSKDKFHTHQKASQYSGEVDVIEELVL 436
            ++  +  + H   K +     V V+ EL +
Sbjct: 1615 YVNANNLEKHEAYKTNL----VTVLRELFM 1640

[71][TOP]
>UniRef100_Q9E933 210kDa protein n=1 Tax=Broad bean wilt virus 2 RepID=Q9E933_9SECO
          Length = 1870

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
 Frame = +2

Query: 5    NSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVT 178
            NS+ NEIL++YAY       P  +  F   V +  YGDDNLISV+ + +S F+G  +   
Sbjct: 1521 NSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMEEYGDDNLISVSDAISSKFDGSFLVSF 1580

Query: 179  LAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTP 358
            +    +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++  
Sbjct: 1581 IEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVKA 1640

Query: 359  SKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 493
             K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 1641 KK---------------LEMAEAYINNCNNILRELWLHDVKEAKEFR 1672

[72][TOP]
>UniRef100_Q3YC01 Polyprotein (Fragment) n=1 Tax=Stocky prune virus
           RepID=Q3YC01_9SECO
          Length = 795

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKP------EKCRFQQTVCLIVYGDDNLISVAPSCASWFNGE 163
           VNS+ NE  +R+A++++           +    + V   VYGDDNL+SV+   +S +N  
Sbjct: 452 VNSLVNEFFLRFAWKRIVRASLGEAFVHRSIMDREVHFAVYGDDNLVSVSDKYSSLYNLV 511

Query: 164 AIRVTLAEKKVKITDG---SDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIF 334
           +I   L E+ V + +G    ++D P   P P    DFLKR+F+   +G + APLD +++ 
Sbjct: 512 SISSFLRERGVVLKNGQCKDEEDFPPFSPSPS-TCDFLKRRFVLGSSGRVLAPLDKSSLL 570

Query: 335 SSLYWLTPSKD 367
              +W+  S+D
Sbjct: 571 GCAHWVRKSQD 581

[73][TOP]
>UniRef100_Q9IJX4 Nonstructural polyprotein n=1 Tax=Cricket paralysis virus
            RepID=Q9IJX4_CRPV
          Length = 1771

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
 Frame = +2

Query: 2    VNSVFNEILIRYAY----RKLAPKPEKCR-FQQTVCLIVYGDDNLISVAPSCASWFNGEA 166
            +N ++N +++R  +    RKLAP+ +  + F++ V +I YGDDN ++++     WFN   
Sbjct: 1579 INCLYNSMIMRIVWILLARKLAPEMQSMKKFRENVSMISYGDDNCLNISDRVVEWFNQIT 1638

Query: 167  IRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFL---KLDTGVIQAPLDMTAIFS 337
            I   + E K + TD   K    ++     E+ FLK++F+   +L   V  APL    I+ 
Sbjct: 1639 ISEQMKEIKHEYTD-EGKTGDMVKFPSLSEIHFLKKRFVFSHQLQRTV--APLQKDVIYE 1695

Query: 338  SLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRS 505
             L W                    +D  E L++N+N A  E+  H  S E+Q++RS
Sbjct: 1696 MLNWT----------------RNTIDPNEILMMNINTAFREIVYHGKS-EYQKLRS 1734

[74][TOP]
>UniRef100_UPI000043F357 RNA-dependent RNA polymerase n=1 Tax=Cherry rasp leaf virus
           RepID=UPI000043F357
          Length = 707

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCR------FQQTVCLIVYGDDNLISVAPSCASWFNGE 163
           VNS+ N   I ++Y KL  + E         F+Q V    YGDDNL+SV       FN  
Sbjct: 357 VNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYATYGDDNLVSVNDVITEKFNLV 416

Query: 164 AIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSS 340
            I   LAE  V + +G+DK+   + P  P  ++DFLKRKF+    G + APL+   I   
Sbjct: 417 KIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRKFVHYQ-GHVVAPLNPVNITER 475

Query: 341 LYWL 352
           L+W+
Sbjct: 476 LHWI 479

[75][TOP]
>UniRef100_Q6EWG9 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q6EWG9_CRLV
          Length = 2250

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCR------FQQTVCLIVYGDDNLISVAPSCASWFNGE 163
            VNS+ N   I ++Y KL  + E         F+Q V    YGDDNL+SV       FN  
Sbjct: 1900 VNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYATYGDDNLVSVNDVITEKFNLV 1959

Query: 164  AIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSS 340
             I   LAE  V + +G+DK+   + P  P  ++DFLKRKF+    G + APL+   I   
Sbjct: 1960 KIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRKFVHYQ-GHVVAPLNPVNITER 2018

Query: 341  LYWL 352
            L+W+
Sbjct: 2019 LHWI 2022

[76][TOP]
>UniRef100_Q5DIW8 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q5DIW8_CRLV
          Length = 2235

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCR------FQQTVCLIVYGDDNLISVAPSCASWFNGE 163
            VNS+ N   I ++Y KL  + E         F+Q V    YGDDNL+SV       FN  
Sbjct: 1885 VNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYATYGDDNLVSVNDVITERFNLV 1944

Query: 164  AIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSS 340
             I   LAE  V + +G+DK+   + P  P  ++DFLKRKF+    G + APL+   I   
Sbjct: 1945 KIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRKFVHYQ-GHVVAPLNPVNITER 2003

Query: 341  LYWL 352
            L+W+
Sbjct: 2004 LHWI 2007

[77][TOP]
>UniRef100_Q769F2 RNA dependent RNA polymerase (Fragment) n=1 Tax=Satsuma dwarf virus
           RepID=Q769F2_SDV
          Length = 374

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGE 163
           +NSV NE  +++++  +      A +   C F +   + VYGDDN +SVA   AS +N +
Sbjct: 47  LNSVVNEFYLKWSWMGIMREAGYAKEASLCAFHEATEISVYGDDNFVSVATPVASLYNLK 106

Query: 164 AIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFL-KLDTGVIQAPLDMTAIFS 337
            I   L+   VK+ DG+   + TI+P  P  E+DFLKRKF+    +  I  PL+  +I  
Sbjct: 107 TISEFLSRVGVKLGDGA--KSGTIKPFIPLEEVDFLKRKFVADSKSTAILCPLNKRSIEE 164

Query: 338 SLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 472
            L+++                 G  D I  L LN+  AL E + H
Sbjct: 165 RLFYV----------------RGGQDEIAALELNIATALCEAFFH 193

[78][TOP]
>UniRef100_UPI0000164A53 RNA-dependent RNA polymerase n=1 Tax=Apple latent spherical virus
           RepID=UPI0000164A53
          Length = 709

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKL-APKPEKC-----RFQQTVCLIVYGDDNLISVAPSCASWFNGE 163
           VNS+ N   + +AY KL + +  K       F+  V   VYGDDNLISV  +    FN  
Sbjct: 357 VNSLVNSFFVHFAYMKLHSSEVHKALYPLYSFRTLVSYAVYGDDNLISVHDTIKDTFNLV 416

Query: 164 AIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSS 340
            I   L E  V + +G+DK+   + P  P  ++DFLKR+F  L  G I APL+   I   
Sbjct: 417 TISNLLLEHGVTLKNGADKNEEILSPFYPIEKVDFLKRRFTTLQ-GHIVAPLNTVNITER 475

Query: 341 LYWL 352
           L+W+
Sbjct: 476 LHWV 479

[79][TOP]
>UniRef100_Q9JGP2 235K polyprotein n=1 Tax=Apple latent spherical virus
            RepID=Q9JGP2_9SECO
          Length = 2079

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKL-APKPEKC-----RFQQTVCLIVYGDDNLISVAPSCASWFNGE 163
            VNS+ N   + +AY KL + +  K       F+  V   VYGDDNLISV  +    FN  
Sbjct: 1727 VNSLVNSFFVHFAYMKLHSSEVHKALYPLYSFRTLVSYAVYGDDNLISVHDTIKDTFNLV 1786

Query: 164  AIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSS 340
             I   L E  V + +G+DK+   + P  P  ++DFLKR+F  L  G I APL+   I   
Sbjct: 1787 TISNLLLEHGVTLKNGADKNEEILSPFYPIEKVDFLKRRFTTLQ-GHIVAPLNTVNITER 1845

Query: 341  LYWL 352
            L+W+
Sbjct: 1846 LHWV 1849

[80][TOP]
>UniRef100_B6CWG9 Polyprotein n=1 Tax=Tomato torrado virus RepID=B6CWG9_9SECO
          Length = 2158

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 55/171 (32%), Positives = 77/171 (45%), Gaps = 19/171 (11%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIVYGDDNLISVAPSCASWFNG 160
            NS+ NE  +RYA+  L  +P         K      + + VYGDDNL++V P    W+  
Sbjct: 1454 NSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVAVYGDDNLVAV-PMELQWYTL 1512

Query: 161  EAIRVTLAEKKVKITDGSDKDAPTIEPK--PFWELDFLKRKFLKLDTGVIQAPLDMTAIF 334
             AI   L    V I +G DK+      K     EL FL R F +   G +QAPL   +I 
Sbjct: 1513 PAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSELTFLSRGFKRHRLGYVQAPLKWVSII 1572

Query: 335  SSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEELVLNVNVALME 460
              +YW+ PS          +   T  + + + G   V E+LV +V  AL E
Sbjct: 1573 EPMYWIRPSVGCPDALAMLENIDTGVREAFHHGP-QVFEKLVTDVQNALKE 1622

[81][TOP]
>UniRef100_A1XIP9 Polyprotein n=1 Tax=Tomato torrado virus RepID=A1XIP9_9SECO
          Length = 2158

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 55/171 (32%), Positives = 77/171 (45%), Gaps = 19/171 (11%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIVYGDDNLISVAPSCASWFNG 160
            NS+ NE  +RYA+  L  +P         K      + + VYGDDNL++V P    W+  
Sbjct: 1454 NSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVAVYGDDNLVAV-PMELHWYTL 1512

Query: 161  EAIRVTLAEKKVKITDGSDKDAPTIEPK--PFWELDFLKRKFLKLDTGVIQAPLDMTAIF 334
             AI   L    V I +G DK+      K     EL FL R F +   G +QAPL   +I 
Sbjct: 1513 PAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSELTFLSRGFKRHRLGYVQAPLKWVSII 1572

Query: 335  SSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEELVLNVNVALME 460
              +YW+ PS          +   T  + + + G   V E+LV +V  AL E
Sbjct: 1573 EPMYWIRPSVGCPDALAMLENIDTGVREAFHHGP-QVFEKLVTDVQNALKE 1622

[82][TOP]
>UniRef100_A7KCA2 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-B
            RepID=A7KCA2_9VIRU
          Length = 1614

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            +NS+ N + +RY Y  L P+     F+  V L+ YGDDN++SV+  C  WFN  +I  T 
Sbjct: 1297 LNSIVNSLRMRYVYFMLNPEHTVTTFKDNVNLMTYGDDNIMSVSREC-DWFNHTSISETF 1355

Query: 182  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLD-TGVIQAPLDMTAIFSSLYWLTP 358
            A   +  T  +DK++ ++      +  FLKR +   D  G   APL+  +I  SL   T 
Sbjct: 1356 ATLNIVYT-MADKESASVPFINIKDASFLKRTWRMDDQLGCYVAPLEEESIEKSLMVWTR 1414

Query: 359  SK 364
            SK
Sbjct: 1415 SK 1416

[83][TOP]
>UniRef100_O36966 Replicase polyprotein n=1 Tax=Drosophila C virus RepID=O36966_9VIRU
          Length = 1759

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
 Frame = +2

Query: 2    VNSVFNEILIRYAY----RKLAPKPEKCR-FQQTVCLIVYGDDNLISVAPSCASWFNGEA 166
            +N ++N I++R ++     K  P+ +  + F + V LI YGDDN++++      WFN   
Sbjct: 1567 INCLYNSIIMRLSWIRVMEKFQPRLKSMKWFNEYVALITYGDDNVLNIDAKVVEWFNQIN 1626

Query: 167  IRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFL---KLDTGVIQAPLDMTAIFS 337
            I   + E + + TD + K    ++ +   ++ FLKRKF    +L   V  APL +  I+ 
Sbjct: 1627 ISEVMTEMRHEYTDEA-KTGDIVKSRKLEDIFFLKRKFRFSPELQRHV--APLKIEVIYE 1683

Query: 338  SLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVA 517
             L W   S                +D  E L+ N+  A  E+  H   +E+ ++RS  +A
Sbjct: 1684 MLNWSRRS----------------IDPDEILMSNIETAFREVVYHG-KEEYDKLRSAVLA 1726

[84][TOP]
>UniRef100_C7EXM2 Polyprotein n=1 Tax=Tomato chocolate spot virus RepID=C7EXM2_9VIRU
          Length = 2155

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIVYGDDNLISVAPSCASWFNG 160
            NS+ NE  +RYA+  L  +P         K      + + VYGDDNL++V P    W++ 
Sbjct: 1457 NSLLNEFYMRYAFISLLRRPHIAARAIGVKPHDFNQLFVAVYGDDNLVAV-PLHLQWYSL 1515

Query: 161  EAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIF 334
              I   L    V I +G DK  D   ++ +   EL FL R F +   G   APL   +I 
Sbjct: 1516 PNIAQELDMVNVVIKNGLDKSMDVNEVQFQDLSELTFLSRGFKRHALGYHMAPLKWVSII 1575

Query: 335  SSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEELVLNVNVALME 460
              +YW+ P+          +   T  + + + G+V   E+LV +V  AL E
Sbjct: 1576 EPMYWIRPAPGCPDAQAMMENVETGIREAFHHGQV-AYEKLVADVQEALNE 1625

[85][TOP]
>UniRef100_A9UC61 Polyprotein n=1 Tax=Tomato marchitez virus RepID=A9UC61_9SECO
          Length = 2151

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKLAPKP---------EKCRFQQTVCLIVYGDDNLISVAPSCASWFN 157
            NS+ NE  +RYA+  L  +P         +   F Q + + VYGDDNL++V P    W++
Sbjct: 1455 NSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFNQ-LFIAVYGDDNLVAV-PLHLQWYS 1512

Query: 158  GEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAI 331
               I   L    V I +G DK  D   ++ +   EL FL R F +   G   APL   +I
Sbjct: 1513 LPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSELTFLSRGFKRHALGYHMAPLKWVSI 1572

Query: 332  FSSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEELVLNVNVALME 460
               +YW+ P+          +   T  + + + G V   ++LVL+V  AL E
Sbjct: 1573 IEPMYWIRPAPGCPDTQAMMENVETGIREAFHHGRV-AYDKLVLDVQTALDE 1623

[86][TOP]
>UniRef100_A4UVR7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Citrus mosaic
           sadwavirus RepID=A4UVR7_SDV
          Length = 319

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
 Frame = +2

Query: 71  CRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KP 247
           C F +   + +YGDDN +SVA + AS +N E I   L+   VK+ DG+   + TI+P  P
Sbjct: 21  CAFHEATEISLYGDDNFVSVATAVASVYNLETISNFLSRVGVKLGDGA--KSGTIKPFIP 78

Query: 248 FWELDFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVI 421
             E+DFLKR+F+  D+G   I  PL   +I   L+++                 G  D +
Sbjct: 79  LEEVDFLKRQFI-ADSGSTAILCPLKKISIEERLFYV----------------KGGQDEL 121

Query: 422 EELVLNVNVALMELYLH 472
             L LNV  AL E + H
Sbjct: 122 AALELNVATALCEAFFH 138

[87][TOP]
>UniRef100_UPI0000164A61 RNA dependent RNA polymerase n=1 Tax=Strawberry mottle virus
           RepID=UPI0000164A61
          Length = 694

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEK----CRFQQTVCLI-VYGDDNLISVAPSCASWFNGEA 166
           +NSV N+  + +A+RK+  + +      R  ++ C   VYGDDN++S +      +N   
Sbjct: 352 INSVVNQFYLMWAWRKIMSRIDPGLVPYRVMRSHCTFSVYGDDNVVSFSLQVKDMYNLVT 411

Query: 167 IRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLY 346
           I   L    V ++DG  K    ++   F ELDFLKR+++         PL  +AI   L+
Sbjct: 412 IAAELKTIGVNLSDGK-KTGNLVKWMEFSELDFLKRRWVLYSGQGFLCPLHKSAIEERLF 470

Query: 347 WLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH-NDSKEFQRVR 502
           W+  S+D                 +E L  N   ALME + H  D   F R R
Sbjct: 471 WVRSSEDS----------------VETLDDNCYSALMEAFHHGRDYFNFLRAR 507

[88][TOP]
>UniRef100_Q8UYV9 Polyprotein n=1 Tax=Strawberry mottle virus RepID=Q8UYV9_9SECO
          Length = 1915

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEK----CRFQQTVCLI-VYGDDNLISVAPSCASWFNGEA 166
            +NSV N+  + +A+RK+  + +      R  ++ C   VYGDDN++S +      +N   
Sbjct: 1573 INSVVNQFYLMWAWRKIMSRIDPGLVPYRVMRSHCTFSVYGDDNVVSFSLQVKDMYNLVT 1632

Query: 167  IRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLY 346
            I   L    V ++DG  K    ++   F ELDFLKR+++         PL  +AI   L+
Sbjct: 1633 IAAELKTIGVNLSDGK-KTGNLVKWMEFSELDFLKRRWVLYSGQGFLCPLHKSAIEERLF 1691

Query: 347  WLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH-NDSKEFQRVR 502
            W+  S+D                 +E L  N   ALME + H  D   F R R
Sbjct: 1692 WVRSSEDS----------------VETLDDNCYSALMEAFHHGRDYFNFLRAR 1728

[89][TOP]
>UniRef100_Q9YZ97 Polyprotein (Fragment) n=1 Tax=Navel orange infectious mottling virus
            RepID=Q9YZ97_SDV
          Length = 872

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 54/171 (31%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGE 163
            +NS+ NE  +++++  L      A +     F +   + +YGDDN +SVA   AS +N +
Sbjct: 544  INSIVNEFYLKWSWMGLMKEAGYAKEASLYAFHEATEISLYGDDNFVSVATPVASLYNLK 603

Query: 164  AIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSL 343
             I   L    VK+ DG+ K   T    P  E+DFLKR+F+        A    TAI    
Sbjct: 604  TISEFLRRIGVKLGDGA-KTGITKPFIPLEEVDFLKRQFV--------ADAGSTAI---- 650

Query: 344  YWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQR 496
              L P K K    ++     G  D +  L LN+  AL E + H   KE+ R
Sbjct: 651  --LCPLK-KISIEERLFYVKGGQDELAALELNMATALCEAFFH--GKEYFR 696

[90][TOP]
>UniRef100_Q1G659 Polyprotein n=2 Tax=Black raspberry necrosis virus RepID=Q1G659_9SECO
          Length = 2163

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKL----APKPEKCRFQQTVCLI-VYGDDNLISVAPSCASWFNGEA 166
            +NS+ N+  + +A+RK+    +P     R  +T C   VYGDDN++S + +    +N   
Sbjct: 1634 INSMVNQFYLMWAWRKIMSRISPSMVTYRVMRTHCTFSVYGDDNVVSFSLAVRDMYNLCT 1693

Query: 167  IRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTG-VIQAPLDMTAIFSSL 343
            I   L    V ++DG  K    I+   F +LDFLKR++ +L+ G   + PLD  AI   L
Sbjct: 1694 IADELKTIGVTLSDGK-KTGVLIKWTGFKDLDFLKRRW-ELEPGHGFKCPLDKMAIEERL 1751

Query: 344  YWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 472
            +W+  S+D                 +E L  N   ALME + H
Sbjct: 1752 FWVRKSEDN----------------MESLDDNCYSALMEAFHH 1778

[91][TOP]
>UniRef100_A0N0G3 Polyprotein (Fragment) n=1 Tax=Tomato apex necrosis virus
            RepID=A0N0G3_9VIRU
          Length = 1943

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
 Frame = +2

Query: 5    NSVFNEILIRYAYRKLAPKP---------EKCRFQQTVCLIVYGDDNLISVAPSCASWFN 157
            NS+ NE  +RYA+  L  +P         +   F Q + + VYGDDNL++V P    W++
Sbjct: 1247 NSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFNQ-LFIAVYGDDNLVAV-PLHLQWYS 1304

Query: 158  GEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAI 331
               I   L    V I +G DK  D   ++ +   EL FL R F +   G   APL   +I
Sbjct: 1305 LPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSELTFLSRGFKRHALGYHMAPLKWVSI 1364

Query: 332  FSSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEELVLNVNVALME 460
               +YW+ P+          +   T  + + + G V   ++LV +V  AL E
Sbjct: 1365 IEPMYWIRPAPGCPDTQAMMENVETGIREAFHHGRV-AYDKLVSDVQTALDE 1415

[92][TOP]
>UniRef100_UPI0000164A59 RNA-dependent RNA polymerase n=1 Tax=Satsuma dwarf virus
           RepID=UPI0000164A59
          Length = 682

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGE 163
           +NSV NE  +++++  L      A +     F +   + +YGDDN +SVA   AS +N  
Sbjct: 355 INSVVNEFYLKWSWIGLLKEAGYANQATLYAFHEATEISLYGDDNFVSVATPVASVYNLT 414

Query: 164 AIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFLKLDTG--VIQAPLDMTAIF 334
            I   L    VK+ DG+     TI+P  P  E+DFLKR+F+  D+G   I  PL   +I 
Sbjct: 415 TISNFLGRIGVKLGDGA--KTGTIKPFIPLEEVDFLKRQFV-ADSGSTAILCPLKKISIE 471

Query: 335 SSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 472
             L+++                 G  D I  L LN+  AL E + H
Sbjct: 472 ERLFYV----------------RGGQDEIAALELNIATALCEAFFH 501

[93][TOP]
>UniRef100_Q9WAL8 Polyprotein n=3 Tax=Satsuma dwarf virus RepID=Q9WAL8_SDV
          Length = 2081

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGE 163
            +NSV NE  +++++  L      A +     F +   + +YGDDN +SVA   AS +N  
Sbjct: 1754 INSVVNEFYLKWSWIGLLKEAGYANQATLYAFHEATEISLYGDDNFVSVATPVASVYNLT 1813

Query: 164  AIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFLKLDTG--VIQAPLDMTAIF 334
             I   L    VK+ DG+     TI+P  P  E+DFLKR+F+  D+G   I  PL   +I 
Sbjct: 1814 TISNFLGRIGVKLGDGA--KTGTIKPFIPLEEVDFLKRQFV-ADSGSTAILCPLKKISIE 1870

Query: 335  SSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 472
              L+++                 G  D I  L LN+  AL E + H
Sbjct: 1871 ERLFYV----------------RGGQDEIAALELNIATALCEAFFH 1900

[94][TOP]
>UniRef100_B3F388 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F388_9VIRU
          Length = 139

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/68 (42%), Positives = 42/68 (61%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           +NS+ N + +RYAY  L PK E   F++ V L+ YGDDN++SV+P+ A W+N  AI    
Sbjct: 68  INSLVNSLYMRYAYCLLNPKHEVSSFKENVSLMTYGDDNIMSVSPT-APWYNHTAIAAAF 126

Query: 182 AEKKVKIT 205
           A   +  T
Sbjct: 127 ATMDITYT 134

[95][TOP]
>UniRef100_A4UVR5 RNA-dependent RNA polymerase (Fragment) n=2 Tax=Citrus mosaic
           sadwavirus RepID=A4UVR5_SDV
          Length = 319

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
 Frame = +2

Query: 77  FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFW 253
           F +   + +YGDDN +SVA + AS +N E I   L+   VK+ DG+   + TI+P  P  
Sbjct: 23  FYEATEISLYGDDNFVSVATAVASVYNLETISNFLSRVGVKLGDGA--KSGTIKPFIPLE 80

Query: 254 ELDFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEE 427
           E+DFLKR+F+  D+G   I  PL   +I   L+++                 G  D +  
Sbjct: 81  EVDFLKRQFV-ADSGSTAILCPLKKISIEERLFYV----------------KGGQDELAA 123

Query: 428 LVLNVNVALMELYLH 472
           L LNV  AL E + H
Sbjct: 124 LELNVATALCEAFFH 138

[96][TOP]
>UniRef100_UPI00004FF342 polymerase n=1 Tax=Strawberry latent ringspot virus
           RepID=UPI00004FF342
          Length = 675

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           VNS+ N  L+R+++  +        F   V L V GDDNL+SV    A  FN + +   L
Sbjct: 347 VNSLVNHFLVRWSWEHMMAS-SSLFFTDCVELAVVGDDNLVSVKQVAAEDFNLKKLSAFL 405

Query: 182 AEKKVKITDGSDKDAPTI-EPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 352
           A     + DGSDK+   + E  P  + DFLKR F K       APL   ++  SL+W+
Sbjct: 406 AGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCF-KARGDRYLAPLSWLSLSESLHWV 462

[97][TOP]
>UniRef100_Q5G2U4 250 kDa polyprotein n=1 Tax=Strawberry latent ringspot virus
            RepID=Q5G2U4_9SECO
          Length = 2227

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            VNS+ N  L+R+++  +        F   V L V GDDNL+SV    A  FN + +   L
Sbjct: 1899 VNSLVNHFLVRWSWEHMMAS-SSLFFTDCVELAVVGDDNLVSVKQVAAEDFNLKKLSAFL 1957

Query: 182  AEKKVKITDGSDKDAPTI-EPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 352
            A     + DGSDK+   + E  P  + DFLKR F K       APL   ++  SL+W+
Sbjct: 1958 AGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCF-KARGDRYLAPLSWLSLSESLHWV 2014

[98][TOP]
>UniRef100_Q20LA1 Polyprotein 1 (Fragment) n=1 Tax=Raspberry ringspot virus
           RepID=Q20LA1_9SECO
          Length = 533

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = +2

Query: 5   NSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPS 139
           NS+FNEIL+R AYR L P+ E+  F   V LIVYGDDN++ + P+
Sbjct: 487 NSIFNEILVRCAYRSLVPEIERPFFSNNVALIVYGDDNVMGIHPN 531

[99][TOP]
>UniRef100_B5LPA0 Polyprotein n=1 Tax=Infectious flacherie virus RepID=B5LPA0_9VIRU
          Length = 3085

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            VNSV N IL+ Y + K+A +     F+ T  +IV GDD +IS+       F+   I    
Sbjct: 2774 VNSVVNLILMNYMWIKIARRRASEFFKLTY-IIVMGDDVVISLPKQLTEEFDCRKICAEF 2832

Query: 182  AEKKVKITDGSDKDAPTIEPKP---FWELDFLKRKFLKLDT--GVIQAPLDMTAIFSSLY 346
            A+  +K+TD S+K+  T EPKP   F + +FL R F   D    +  AP+   A+F    
Sbjct: 2833 AKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYPDITFAPVKTIALFDCPL 2890

Query: 347  WLTPSKDK 370
            W++  +D+
Sbjct: 2891 WISKGQDE 2898

[100][TOP]
>UniRef100_B3F389 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F389_9VIRU
          Length = 139

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/68 (41%), Positives = 39/68 (57%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           +NS+ N + IRY YR L PK E   F+Q V L+ YGDDN++ ++    SWFN  +I   L
Sbjct: 68  INSLVNSLYIRYCYRMLNPKKEVITFKQNVNLMTYGDDNIMGISDK-ISWFNHTSIADCL 126

Query: 182 AEKKVKIT 205
               +  T
Sbjct: 127 GMANIVYT 134

[101][TOP]
>UniRef100_B3F394 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F394_9VIRU
          Length = 138

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 24/62 (38%), Positives = 40/62 (64%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           +N + N + +RY Y KL+P+     F++ V ++ YGDDN++ V+ S A WFN   ++ TL
Sbjct: 67  INGLANSLYLRYCYAKLSPEANCVNFKRDVAVMTYGDDNIMGVSDS-APWFNHTTLQSTL 125

Query: 182 AE 187
           A+
Sbjct: 126 AD 127

[102][TOP]
>UniRef100_Q6WGS3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGS3_9PICO
          Length = 151

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 29/78 (37%), Positives = 47/78 (60%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           +NS+ N + +RYAY  L+P+ +   F+  V L  YGDDN+  V+  CA +F    I+  L
Sbjct: 67  INSLANSLYMRYAYYVLSPQKDLLTFKHHVALFTYGDDNICGVSIECA-FFTHTGIQAAL 125

Query: 182 AEKKVKITDGSDKDAPTI 235
           AE  ++ T  +DK+A ++
Sbjct: 126 AECGIRYT-MADKEAESV 142

[103][TOP]
>UniRef100_Q0EDJ7 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ7_9VIRU
          Length = 297

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           +N++ N +LIR A+  +   P    F Q V L+ YGDD +++V+ +    FN   I    
Sbjct: 161 LNTISNCLLIRLAWLGITDLPLS-EFSQNVVLVCYGDDLIMNVSDNMIDXFNAVTIGKFF 219

Query: 182 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQAPLDMTAIFSSLYW 349
           ++ K++ TD  DK   T++ +      FLK  FLK  T  V  A LD  ++  +  W
Sbjct: 220 SQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFLANLDKVSVEGTTNW 275

[104][TOP]
>UniRef100_Q0EDJ3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ3_9VIRU
          Length = 297

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           +N++ N +LIR A+  +   P    F Q V L+ YGDD +++V+ +    FN   I    
Sbjct: 161 LNTISNCLLIRLAWLGITDLPLS-EFSQNVVLVCYGDDLIMNVSDNMIDXFNAVTIGKFF 219

Query: 182 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQAPLDMTAIFSSLYW 349
           ++ K++ TD  DK   T++ +      FLK  FLK  T  V  A LD  ++  +  W
Sbjct: 220 SQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFLANLDKVSVEGTTNW 275

[105][TOP]
>UniRef100_O70710 Polyprotein n=1 Tax=Infectious flacherie virus RepID=O70710_9VIRU
          Length = 3085

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
 Frame = +2

Query: 2    VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
            VNSV N IL+ Y + K+  +     F+ T  +IV GDD +IS+       F+   I    
Sbjct: 2774 VNSVVNLILMNYMWIKITRRRASEFFKLTY-IIVMGDDVVISLPKQLTEEFDCRKICAEF 2832

Query: 182  AEKKVKITDGSDKDAPTIEPKP---FWELDFLKRKFLKLDT--GVIQAPLDMTAIFSSLY 346
            A+  +K+TD S+K+  T EPKP   F + +FL R F   D    +  AP+   A+F    
Sbjct: 2833 AKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYPDITFAPVKTIALFDCPL 2890

Query: 347  WLTPSKDK 370
            W++  +D+
Sbjct: 2891 WISKGQDE 2898

[106][TOP]
>UniRef100_A3RKR2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Infectious
           flacherie virus RepID=A3RKR2_9VIRU
          Length = 639

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           VNSV N IL+ Y + K+  +     F+ T  +IV GDD +IS+       F+   I    
Sbjct: 328 VNSVVNLILMNYMWIKITRRRASEFFKLTY-IIVMGDDVVISLPKQLTEEFDCRKICAEF 386

Query: 182 AEKKVKITDGSDKDAPTIEPKP---FWELDFLKRKFLKLDT--GVIQAPLDMTAIFSSLY 346
           A+  +K+TD S+K+  T EPKP   F + +FL R F   D    +  AP+   A+F    
Sbjct: 387 AKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYPDITFAPVKTIALFDCPL 444

Query: 347 WLTPSKDK 370
           W++  +D+
Sbjct: 445 WISKGQDE 452

[107][TOP]
>UniRef100_Q6WGR8 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGR8_9PICO
          Length = 151

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 29/78 (37%), Positives = 46/78 (58%)
 Frame = +2

Query: 2   VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 181
           +NS+ N + +RYAY  L P+ +   F+  V L  YGDDN+  V+  CA +F    I+  L
Sbjct: 67  INSLANSLYMRYAYYALNPQKDLLTFKHRVALFTYGDDNICGVSIECA-FFTHTGIQAAL 125

Query: 182 AEKKVKITDGSDKDAPTI 235
           AE  ++ T  +DK+A ++
Sbjct: 126 AECGIRYT-MADKEAESV 142

[108][TOP]
>UniRef100_C1K2M4 Protease/RNA-dependent RNA polymerase (Fragment) n=1 Tax=Nasonia
           vitripennis virus RepID=C1K2M4_9VIRU
          Length = 787

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 7/129 (5%)
 Frame = +2

Query: 5   NSVFNEILIRYAYRKLAPK-----PEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 169
           NS  N I IR AY  LA K      +   F+Q V +   GDD +++V P   SWFN   +
Sbjct: 596 NSECNSIYIRCAYLGLARKYAPVLADLYWFKQYVRMFSNGDDLIMAVKPDIISWFNNRTL 655

Query: 170 RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT--GVIQAPLDMTAIFSSL 343
               ++  +K+TD   K     E     E  +LKR F K  T  G   APL+  +I  + 
Sbjct: 656 IDFFSQHNIKMTDAL-KSGKVREFCSLEEATYLKRGFKKHPTRPGEWLAPLERASITDTA 714

Query: 344 YWLTPSKDK 370
            W+  S D+
Sbjct: 715 NWIWRSVDR 723