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[1][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 204 bits (518), Expect = 5e-51
Identities = 99/194 (51%), Positives = 131/194 (67%), Gaps = 3/194 (1%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P Q+A+G + PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV
Sbjct: 191 PRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFV 250
Query: 183 SCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSS 362
+ +LR+ +WG T T+ Q QMPH D LKIQSPFY+TANFG GA+FWV P+SS
Sbjct: 251 TARLRVALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSS 310
Query: 363 PMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEG--TDKEFQMFVPSR 533
PMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF ++RP K ++ +PSR
Sbjct: 311 PMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSR 370
Query: 534 VSNLVMKGVECTNF 575
V N+ K TN+
Sbjct: 371 VCNIAYKEATVTNY 384
[2][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 204 bits (518), Expect = 5e-51
Identities = 100/191 (52%), Positives = 129/191 (67%), Gaps = 1/191 (0%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FV
Sbjct: 15 PRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFV 74
Query: 183 SCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSS 362
S +LR+ +WG T+ Q QMPH D+ G + LKIQSPFY+TAN G A FWV P+SS
Sbjct: 75 SSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSS 134
Query: 363 PMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEGTDKEFQMFVPSRVS 539
PMAPE +ES E+YI+I GI++ LC+ INY+Q FGWF +VR T+KE + +PSR++
Sbjct: 135 PMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIA 194
Query: 540 NLVMKGVECTN 572
N+ K E N
Sbjct: 195 NIEYKEAEVIN 205
[3][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 204 bits (518), Expect = 5e-51
Identities = 100/191 (52%), Positives = 129/191 (67%), Gaps = 1/191 (0%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FV
Sbjct: 1035 PRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFV 1094
Query: 183 SCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSS 362
S +LR+ +WG T+ Q QMPH D+ G + LKIQSPFY+TAN G A FWV P+SS
Sbjct: 1095 SSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSS 1154
Query: 363 PMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEGTDKEFQMFVPSRVS 539
PMAPE +ES E+YI+I GI++ LC+ INY+Q FGWF +VR T+KE + +PSR++
Sbjct: 1155 PMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIA 1214
Query: 540 NLVMKGVECTN 572
N+ K E N
Sbjct: 1215 NIEYKEAEVIN 1225
[4][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 204 bits (518), Expect = 5e-51
Identities = 99/194 (51%), Positives = 131/194 (67%), Gaps = 3/194 (1%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P Q+A+G + PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV
Sbjct: 1001 PRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFV 1060
Query: 183 SCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSS 362
+ +LR+ +WG T T+ Q QMPH D LKIQSPFY+TANFG GA+FWV P+SS
Sbjct: 1061 TARLRVALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSS 1120
Query: 363 PMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEG--TDKEFQMFVPSR 533
PMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF ++RP K ++ +PSR
Sbjct: 1121 PMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSR 1180
Query: 534 VSNLVMKGVECTNF 575
V N+ K TN+
Sbjct: 1181 VCNIAYKEATVTNY 1194
[5][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 201 bits (512), Expect = 3e-50
Identities = 99/193 (51%), Positives = 132/193 (68%), Gaps = 2/193 (1%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P Q+A+GT+A P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV
Sbjct: 190 PKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFV 249
Query: 183 SCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSS 362
+ KLRI +WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +
Sbjct: 250 TSKLRIALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCA 309
Query: 363 PMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDK--EFQMFVPSRV 536
PMAPE VE+ E+YI+I GI++ P LC++INY+QRF W ++ K ++ +PSR+
Sbjct: 310 PMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRI 369
Query: 537 SNLVMKGVECTNF 575
NL K V+ TNF
Sbjct: 370 GNLSSKHVKVTNF 382
[6][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 201 bits (512), Expect = 3e-50
Identities = 99/193 (51%), Positives = 132/193 (68%), Gaps = 2/193 (1%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P Q+A+GT+A P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV
Sbjct: 1027 PKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFV 1086
Query: 183 SCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSS 362
+ KLRI +WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +
Sbjct: 1087 TSKLRIALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCA 1146
Query: 363 PMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDK--EFQMFVPSRV 536
PMAPE VE+ E+YI+I GI++ P LC++INY+QRF W ++ K ++ +PSR+
Sbjct: 1147 PMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRI 1206
Query: 537 SNLVMKGVECTNF 575
NL K V+ TNF
Sbjct: 1207 GNLSSKHVKVTNF 1219
[7][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 201 bits (511), Expect = 3e-50
Identities = 99/192 (51%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P QLA+GT A T PL+ AEKS+T++ ETYSY+ G+LSHFLG+GG +RF VHSTSS +
Sbjct: 190 PQQLAIGTTATTNFPLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFRVHSTSSCLL 249
Query: 183 SCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSS 362
+ KLR+ +W + + + H + G IQ+ +TANFG GA+FW++PLS+
Sbjct: 250 TSKLRVFLWEHSQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARFWIMPLSA 308
Query: 363 PMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRP-EGTDKEFQMFVPSRVS 539
P AP+ VE+KFEFYIRI GID PDLC+QINY+QRFGWFM+ P + T E +PSR+
Sbjct: 309 PRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRIG 368
Query: 540 NLVMKGVECTNF 575
N+ +K +C NF
Sbjct: 369 NIGVKNTKCVNF 380
[8][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 197 bits (500), Expect = 6e-49
Identities = 89/190 (46%), Positives = 131/190 (68%), Gaps = 2/190 (1%)
Frame = +3
Query: 12 LALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCK 191
+A+GT+ T +P++LA + + + + YSYA G+LSHFLGVGG + FSVHST+S FVSC
Sbjct: 1026 IAIGTYTMTKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFSVHSTASTFVSCS 1085
Query: 192 LRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMA 371
LR+ +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+A
Sbjct: 1086 LRVALWGTIPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLA 1145
Query: 372 PEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNL 545
PE +E+ F++YI IHGI+++ LC++INY Q F WFM+ T + +P+R++NL
Sbjct: 1146 PETMETGFQYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANL 1205
Query: 546 VMKGVECTNF 575
K V+ TNF
Sbjct: 1206 TSKEVQVTNF 1215
[9][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 194 bits (494), Expect = 3e-48
Identities = 91/190 (47%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Frame = +3
Query: 12 LALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCK 191
+A+GT+ T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC
Sbjct: 193 IAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCS 252
Query: 192 LRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMA 371
LRI +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+A
Sbjct: 253 LRIALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLA 312
Query: 372 PEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNL 545
PE +E+ F++YI IHGI + +LC++INY Q F WFM+ T + +P+R++NL
Sbjct: 313 PETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANL 372
Query: 546 VMKGVECTNF 575
K V+ TNF
Sbjct: 373 TSKEVQITNF 382
[10][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 194 bits (494), Expect = 3e-48
Identities = 91/190 (47%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Frame = +3
Query: 12 LALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCK 191
+A+GT+ T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC
Sbjct: 1025 IAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCS 1084
Query: 192 LRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMA 371
LRI +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+A
Sbjct: 1085 LRIALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLA 1144
Query: 372 PEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNL 545
PE +E+ F++YI IHGI + +LC++INY Q F WFM+ T + +P+R++NL
Sbjct: 1145 PETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANL 1204
Query: 546 VMKGVECTNF 575
K V+ TNF
Sbjct: 1205 TSKEVQITNF 1214
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 107 bits (268), Expect = 5e-22
Identities = 55/163 (33%), Positives = 85/163 (52%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P +L LG T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V
Sbjct: 203 PKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLV 261
Query: 183 SCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSS 362
+ KL I +W + H D G + +L I+ FY+++ +G GA + L S
Sbjct: 262 ASKLHISMWSKEQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCS 321
Query: 363 PMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRP 491
PM+P +++ F+ +I G +C+ IN+ QRFGWF V P
Sbjct: 322 PMSPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEP 364
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 106 bits (264), Expect = 1e-21
Identities = 56/163 (34%), Positives = 85/163 (52%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P +L LG T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V
Sbjct: 191 PKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLV 249
Query: 183 SCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSS 362
+ + RI +W I H D G + +L I+ FY+++ +G GA V L S
Sbjct: 250 ASQSRISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCS 309
Query: 363 PMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRP 491
PM+P +++ F+ +I G +C+ IN+ QRFGWF V P
Sbjct: 310 PMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEP 352
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 106 bits (264), Expect = 1e-21
Identities = 56/163 (34%), Positives = 85/163 (52%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P +L LG T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V
Sbjct: 874 PKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLV 932
Query: 183 SCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSS 362
+ + RI +W I H D G + +L I+ FY+++ +G GA V L S
Sbjct: 933 ASQSRISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCS 992
Query: 363 PMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRP 491
PM+P +++ F+ +I G +C+ IN+ QRFGWF V P
Sbjct: 993 PMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEP 1035
[14][TOP]
>UniRef100_A2ID55 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID55_9SECO
Length = 784
Score = 58.5 bits (140), Expect = 3e-07
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 6/191 (3%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P ++ L T A+T L A ++G E + I+S + G GT + + V
Sbjct: 458 PFRIPLATRASTLLGFQFARLLTYSTGNEIPHFKQAIMSFYHGAAGTYHGEIIKVGTAQV 517
Query: 183 SCKLRIIIWGT-TP--TIAQTGQMPHCDIVEGGSGELKIQSPF-YSTANFGSEGAQFWVI 350
C L I + + TP Q + PH +++GG GE ++ P + A+F S G ++
Sbjct: 518 QCDLLIYMSNSRTPKTNYYQIYREPHF-LLKGGEGEFALRIPAPEAIASFHSGGVFLHIV 576
Query: 351 PLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRP--EGTDKEFQMFV 524
+ P AP+ V + FEF + IDS + + + F W + +GT + +
Sbjct: 577 VAAGPTAPDGVAAPFEFMVNSKRIDSAGYVPRVMYQTMEFSWVTLSAFLQGT---ATILL 633
Query: 525 PSRVSNLVMKG 557
PSR + + G
Sbjct: 634 PSRPATITRFG 644
[15][TOP]
>UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus
RepID=Q65624_9SECO
Length = 557
Score = 57.4 bits (137), Expect = 8e-07
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 5/169 (2%)
Frame = +3
Query: 78 SGIET-YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW--GTTPTIAQTGQMP 248
SG T YS+ VGG + +V T SK +SC++ +I+ T + Q ++P
Sbjct: 258 SGTNTFYSFPAAYTQLLQSVGGILHGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLP 317
Query: 249 HCDIVEGGSG-ELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGID 425
C I GG ++IQ+PF F + G Q + + PM + + + +++ + I
Sbjct: 318 GCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQ 376
Query: 426 SQPD-LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECT 569
+ D + I F W + FQ +P+R+S+LV+ G T
Sbjct: 377 EEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IPARLSDLVLPGQTVT 423
[16][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +3
Query: 96 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 269
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 270 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 413
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337
[17][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 56.6 bits (135), Expect = 1e-06
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
Frame = +3
Query: 99 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 272
Y+ ++S LG GT+ SV S SS F + I W PT+ Q PH + G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290
Query: 273 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDL 440
E+ I++ F+S A + ++PLS P+AP+ +EF + I+ DSQ P +
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPPM 350
Query: 441 CKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECT 569
F ++P+ +P + + K T
Sbjct: 351 FSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 393
[18][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 55.8 bits (133), Expect = 2e-06
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Frame = +3
Query: 96 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 269
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289
Query: 270 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 443
G E+ I++ +S A + ++PLS P+AP+ +EF + I+ DSQ
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348
Query: 444 KQINYRQRFGWFM---VRPEGTDKEFQMFVPSRVSNLVMKGVECT 569
+ + + WF ++P+ +P + + K T
Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 393
[19][TOP]
>UniRef100_B5KFZ7 Polyprotein P2 n=1 Tax=Arabis mosaic virus RepID=B5KFZ7_ARMV
Length = 1110
Score = 55.5 bits (132), Expect = 3e-06
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P + LGT +A L +++ + Y+Y +LS +LG+GG V+ VH S
Sbjct: 791 PLEYDLGTTSAYKSVSLLLGQTLVDGAHKVYNYNNTLLSFYLGIGGVVKGRVHICSPCTY 850
Query: 183 SCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYST---------ANFGSE 329
LR++ W G T Q + P C + E G+ E++I+SP++ T A+ +
Sbjct: 851 GIVLRVVSEWNGVTNNWNQLFKYPGCYVDENGNFEIEIRSPYHRTPLRLRDAQVASSFTS 910
Query: 330 GAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 440
F+ I S P+AP +K ++I I + PDL
Sbjct: 911 TLNFYAI--SGPIAPSGEIAKMPVVVQIDEI-ALPDL 944
[20][TOP]
>UniRef100_B4YNP8 Polyprotein 2 n=1 Tax=Arabis mosaic virus RepID=B4YNP8_ARMV
Length = 1118
Score = 55.5 bits (132), Expect = 3e-06
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 799 PLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICSPCTY 858
Query: 183 SCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYST---------ANFGSE 329
LR++ W G T Q + P C I E G+ E++I+SP++ T A+ +
Sbjct: 859 GIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDAQAASSFTS 918
Query: 330 GAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 440
F+ I S P+AP +K ++I+ I + PDL
Sbjct: 919 TLNFYAI--SGPIAPSGETAKMPVVVQINEI-ALPDL 952
[21][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +3
Query: 96 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 269
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287
Query: 270 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 413
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 335
[22][TOP]
>UniRef100_A0A9J7 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J7_ARMV
Length = 1084
Score = 55.1 bits (131), Expect = 4e-06
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P + L T +A L +++ + Y+Y +LS++LGVGG V+ VH S
Sbjct: 765 PLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGVGGVVKGKVHICSPCTY 824
Query: 183 SCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYST---------ANFGSE 329
LR++ W G T Q + P C I E G+ E++I+SP++ T A+ +
Sbjct: 825 GIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDGQAASSFTS 884
Query: 330 GAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 440
F+ I S P+AP +K ++I I + PDL
Sbjct: 885 TLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 918
[23][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +3
Query: 96 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 269
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 816 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875
Query: 270 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 413
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 923
[24][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 54.3 bits (129), Expect = 7e-06
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +3
Query: 96 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 269
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 270 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 413
G E+ ++ +S++ + ++PLS P+AP+ +EF + I
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337
[25][TOP]
>UniRef100_B1A9X8 Polyprotein P2 (Fragment) n=1 Tax=Arabis mosaic virus
RepID=B1A9X8_ARMV
Length = 521
Score = 54.3 bits (129), Expect = 7e-06
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 202 PLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICSPCTY 261
Query: 183 SCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYST---------ANFGSE 329
LR++ W G T Q + P C I E G+ E++I+SP++ T A+ +
Sbjct: 262 GIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDAQSASSFTS 321
Query: 330 GAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 440
F+ I S P+AP ++ ++I+ I + PDL
Sbjct: 322 TLNFYAI--SGPIAPSGETARMPVVVQINEI-ALPDL 355
[26][TOP]
>UniRef100_UPI00003FE532 capsid protein n=1 Tax=Arabis mosaic virus RepID=UPI00003FE532
Length = 505
Score = 53.9 bits (128), Expect = 9e-06
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 186 PLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICSPCTY 245
Query: 183 SCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYST---------ANFGSE 329
LR++ W G T Q + P C I E G+ E++I+SP++ T A+ +
Sbjct: 246 GIVLRVVSEWNGVTNNWNQLFKYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAASAFTS 305
Query: 330 GAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 440
F+ I S P+AP +K ++I I + PDL
Sbjct: 306 TLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 339
[27][TOP]
>UniRef100_Q91HK4 Coat protein n=1 Tax=Arabis mosaic virus strain NW RepID=POL2_ARMVN
Length = 1110
Score = 53.9 bits (128), Expect = 9e-06
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Frame = +3
Query: 3 PTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFV 182
P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 791 PLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICSPCTY 850
Query: 183 SCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYST---------ANFGSE 329
LR++ W G T Q + P C I E G+ E++I+SP++ T A+ +
Sbjct: 851 GIVLRVVSEWNGVTNNWNQLFKYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAASAFTS 910
Query: 330 GAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 440
F+ I S P+AP +K ++I I + PDL
Sbjct: 911 TLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 944