BB912966 ( RCE12305 )

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[1][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
            RepID=Q6JX06_9SECO
          Length = 1350

 Score =  209 bits (532), Expect = 1e-52
 Identities = 102/191 (53%), Positives = 131/191 (68%), Gaps = 1/191 (0%)
 Frame = +2

Query: 2    LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
            L YPI P+ L DLD+ L+P  +A+GT A T  PL+ A K V+ S   +YSYA G+LSHFL
Sbjct: 1017 LEYPISPKHLRDLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFL 1076

Query: 182  GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
            GVGG + F V  TSS FVS +LR+ +WG   T+ Q  QMPH D+  G +  L+IQSPFY+
Sbjct: 1077 GVGGILHFKVQCTSSAFVSSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYA 1136

Query: 362  TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MV 538
            TAN G   A FWV P+SSPMAPE +ES  E+YI+I GI++   LC+ INYKQ FGWF +V
Sbjct: 1137 TANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLV 1196

Query: 539  KPEGTDKEFQM 571
            +   T+KE  +
Sbjct: 1197 RRSTTNKEIAL 1207

[2][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
           RepID=UPI0000163D16
          Length = 514

 Score =  209 bits (531), Expect = 2e-52
 Identities = 95/177 (53%), Positives = 127/177 (71%)
 Frame = +2

Query: 2   LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
           +TYPI  E L D++++L P Q+A+G + +   PL+ A +  ++SG   YSYA G+LSHFL
Sbjct: 173 VTYPISLEHLKDIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFL 232

Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
           G+GGT+ F +  TSS FV+ +LR+ +WG T T+ Q  QMPH D        L+IQSPFY+
Sbjct: 233 GIGGTIHFKIQCTSSAFVTARLRVALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYA 292

Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF 532
           TANFG  GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF
Sbjct: 293 TANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWF 349

[3][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
          Length = 1324

 Score =  209 bits (531), Expect = 2e-52
 Identities = 95/177 (53%), Positives = 127/177 (71%)
 Frame = +2

Query: 2    LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
            +TYPI  E L D++++L P Q+A+G + +   PL+ A +  ++SG   YSYA G+LSHFL
Sbjct: 983  VTYPISLEHLKDIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFL 1042

Query: 182  GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
            G+GGT+ F +  TSS FV+ +LR+ +WG T T+ Q  QMPH D        L+IQSPFY+
Sbjct: 1043 GIGGTIHFKIQCTSSAFVTARLRVALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYA 1102

Query: 362  TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF 532
            TANFG  GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF
Sbjct: 1103 TANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWF 1159

[4][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
          Length = 520

 Score =  204 bits (519), Expect = 4e-51
 Identities = 97/180 (53%), Positives = 130/180 (72%)
 Frame = +2

Query: 2   LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
           L+YPI    L+DL+++L+P Q+A+GT A    P++LA K  +TSG   YSYA G+LSHFL
Sbjct: 172 LSYPIEARHLTDLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFL 231

Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
           GVGGT+ F V +TSS FV+ KLRI +WGT P   Q  QMPH D+       L+IQSPF+S
Sbjct: 232 GVGGTIHFVVRTTSSAFVTSKLRIALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFS 291

Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
           TANFG+ G+ F+V  L +PMAPE VE+  E+YI+I GI++ P LC++INYKQRF W +++
Sbjct: 292 TANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLE 351

[5][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
          Length = 1357

 Score =  204 bits (519), Expect = 4e-51
 Identities = 97/180 (53%), Positives = 130/180 (72%)
 Frame = +2

Query: 2    LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
            L+YPI    L+DL+++L+P Q+A+GT A    P++LA K  +TSG   YSYA G+LSHFL
Sbjct: 1009 LSYPIEARHLTDLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFL 1068

Query: 182  GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
            GVGGT+ F V +TSS FV+ KLRI +WGT P   Q  QMPH D+       L+IQSPF+S
Sbjct: 1069 GVGGTIHFVVRTTSSAFVTSKLRIALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFS 1128

Query: 362  TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
            TANFG+ G+ F+V  L +PMAPE VE+  E+YI+I GI++ P LC++INYKQRF W +++
Sbjct: 1129 TANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLE 1188

[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
          Length = 1344

 Score =  203 bits (517), Expect = 7e-51
 Identities = 91/180 (50%), Positives = 128/180 (71%)
 Frame = +2

Query: 2    LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
            LTYPI P  L DLD+VL    +A+GT   T +P++LA +  + +  + YSYA G+LSHFL
Sbjct: 1005 LTYPIKPGHLEDLDLVLKSGSIAIGTYTMTKVPVSLAMRVDSAAKRQAYSYAAGVLSHFL 1064

Query: 182  GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
            GVGG + FSVHST+S FVSC LR+ +WGT PT  +  Q+PH D+       L+IQSPF++
Sbjct: 1065 GVGGDIIFSVHSTASTFVSCSLRVALWGTIPTTEELAQIPHVDVTLDAKATLQIQSPFFA 1124

Query: 362  TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
            TANFG +G  F++  L +P+APE +E+ F++YI IHGI+++  LC++INY Q F WFM++
Sbjct: 1125 TANFGDDGTAFYIATLCAPLAPETMETGFQYYIHIHGINAKAHLCREINYNQHFAWFMLE 1184

[7][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
           virus RepID=Q6XPY1_9SECO
          Length = 330

 Score =  202 bits (515), Expect = 1e-50
 Identities = 99/187 (52%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
 Frame = +2

Query: 14  IGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGG 193
           I P+ L DLD+ L+P  +A+GT A T  PL+ A K V+ S   +YSYA G+LSHFLGVGG
Sbjct: 1   ISPKHLRDLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGG 60

Query: 194 TVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANF 373
            + F V  TSS FVS +LR+ +WG   T+ Q  QMPH D+  G +  L+IQSPFY+TAN 
Sbjct: 61  ILHFKVQCTSSAFVSSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANL 120

Query: 374 GSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEG 550
           G   A FWV P+SSPMAPE +ES  E+YI+I GI++   LC+ INYKQ FGWF +V+   
Sbjct: 121 GDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRST 180

Query: 551 TDKEFQM 571
           T+KE  +
Sbjct: 181 TNKEIAL 187

[8][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
          Length = 511

 Score =  199 bits (505), Expect = 2e-49
 Identities = 91/180 (50%), Positives = 126/180 (70%)
 Frame = +2

Query: 2   LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
           LTYPI    L DLD++L    +A+GT   T +P++LA +  + +  + YSYA GILSHFL
Sbjct: 172 LTYPIESRHLEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFL 231

Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
           GVGG + FSVHST+S FVSC LRI +WGT PT  +  Q+PH D+       L+IQSPF++
Sbjct: 232 GVGGEIIFSVHSTASTFVSCSLRIALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFA 291

Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
           TANFG +G  F++  L +P+APE +E+ F++YI IHGI  + +LC++INY Q F WFM++
Sbjct: 292 TANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLE 351

[9][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
          Length = 1343

 Score =  199 bits (505), Expect = 2e-49
 Identities = 91/180 (50%), Positives = 126/180 (70%)
 Frame = +2

Query: 2    LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
            LTYPI    L DLD++L    +A+GT   T +P++LA +  + +  + YSYA GILSHFL
Sbjct: 1004 LTYPIESRHLEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFL 1063

Query: 182  GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
            GVGG + FSVHST+S FVSC LRI +WGT PT  +  Q+PH D+       L+IQSPF++
Sbjct: 1064 GVGGEIIFSVHSTASTFVSCSLRIALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFA 1123

Query: 362  TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
            TANFG +G  F++  L +P+APE +E+ F++YI IHGI  + +LC++INY Q F WFM++
Sbjct: 1124 TANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLE 1183

[10][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
           RepID=Q64959_9SECO
          Length = 510

 Score =  198 bits (503), Expect = 3e-49
 Identities = 97/181 (53%), Positives = 130/181 (71%)
 Frame = +2

Query: 2   LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
           LT  +    L+DLD++L+P QLA+GT+A T  PL+ AEKS+T++  ETYSY+ G+LSHFL
Sbjct: 172 LTLSVESTHLADLDLLLAPQQLAIGTTATTNFPLSFAEKSITSTKRETYSYSAGLLSHFL 231

Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
           G+GG +RF VHSTSS  ++ KLR+ +W  +    +  +  H   + G      IQ+   +
Sbjct: 232 GIGGKLRFRVHSTSSCLLTSKLRVFLWEHSQPQCRRPKF-HTLTLMGLDWRAVIQAACCA 290

Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
           TANFG  GA+FW++PLS+P AP+ VE+KFEFYIRI GID  PDLC+QINYKQRFGWFM+ 
Sbjct: 291 TANFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQRFGWFMIS 350

Query: 542 P 544
           P
Sbjct: 351 P 351

[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
           RepID=Q1T7B1_CNSV
          Length = 569

 Score =  121 bits (304), Expect = 3e-26
 Identities = 63/181 (34%), Positives = 96/181 (53%)
 Frame = +2

Query: 2   LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
           L+YP     L DLD+ L P +L LG    T +PL+ A KS  +     YS+A   L+HF 
Sbjct: 185 LSYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQ 243

Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
           G+GG +   V+   S+ V+ KL I +W     +       H D   G + +L I+  FY+
Sbjct: 244 GIGGVLHGVVYLVGSQLVASKLHISMWSKEQHVQHQAMNVHVDTDTGVAFDLPIKDAFYA 303

Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
           ++ +G  GA   +  L SPM+P  +++ F+   +I G      +C+ IN+ QRFGWF V+
Sbjct: 304 SSVYGDSGAVIQITCLCSPMSPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVE 363

Query: 542 P 544
           P
Sbjct: 364 P 364

[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
           RepID=UPI0000164A26
          Length = 564

 Score =  120 bits (300), Expect = 1e-25
 Identities = 64/181 (35%), Positives = 96/181 (53%)
 Frame = +2

Query: 2   LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
           L+YP     L DLD+ L P +L LG    T +PL+ A KS  +     YS+A   L+HF 
Sbjct: 173 LSYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQ 231

Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
           G+GG +   V+   S+ V+ + RI +W     I       H D   G + +L I+  FY+
Sbjct: 232 GIGGVLHGVVYLVGSQLVASQSRISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYA 291

Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
           ++ +G  GA   V  L SPM+P  +++ F+   +I G      +C+ IN+ QRFGWF V+
Sbjct: 292 SSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVE 351

Query: 542 P 544
           P
Sbjct: 352 P 352

[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
          Length = 1240

 Score =  120 bits (300), Expect = 1e-25
 Identities = 64/181 (35%), Positives = 96/181 (53%)
 Frame = +2

Query: 2    LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
            L+YP     L DLD+ L P +L LG    T +PL+ A KS  +     YS+A   L+HF 
Sbjct: 856  LSYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQ 914

Query: 182  GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
            G+GG +   V+   S+ V+ + RI +W     I       H D   G + +L I+  FY+
Sbjct: 915  GIGGVLHGVVYLVGSQLVASQSRISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYA 974

Query: 362  TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
            ++ +G  GA   V  L SPM+P  +++ F+   +I G      +C+ IN+ QRFGWF V+
Sbjct: 975  SSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVE 1034

Query: 542  P 544
            P
Sbjct: 1035 P 1035

[14][TOP]
>UniRef100_A2ID55 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
           RepID=A2ID55_9SECO
          Length = 784

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 5/181 (2%)
 Frame = +2

Query: 2   LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
           L +PI P+ + ++DM + P ++ L T A+T L    A     ++G E   +   I+S + 
Sbjct: 440 LEFPIVPQDIHEIDMRVGPFRIPLATRASTLLGFQFARLLTYSTGNEIPHFKQAIMSFYH 499

Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGT-TP--TIAQTGQMPHCDIVEGGSGE--LRIQ 346
           G  GT    +    +  V C L I +  + TP     Q  + PH  +++GG GE  LRI 
Sbjct: 500 GAAGTYHGEIIKVGTAQVQCDLLIYMSNSRTPKTNYYQIYREPHF-LLKGGEGEFALRIP 558

Query: 347 SPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFG 526
           +P  + A+F S G    ++  + P AP+ V + FEF +    IDS   + + +     F 
Sbjct: 559 AP-EAIASFHSGGVFLHIVVAAGPTAPDGVAAPFEFMVNSKRIDSAGYVPRVMYQTMEFS 617

Query: 527 W 529
           W
Sbjct: 618 W 618

[15][TOP]
>UniRef100_B5KFZ7 Polyprotein P2 n=1 Tax=Arabis mosaic virus RepID=B5KFZ7_ARMV
          Length = 1110

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
 Frame = +2

Query: 44   MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 223
            + + P +  LGT++A      L  +++     + Y+Y   +LS +LG+GG V+  VH  S
Sbjct: 787  LTIPPLEYDLGTTSAYKSVSLLLGQTLVDGAHKVYNYNNTLLSFYLGIGGVVKGRVHICS 846

Query: 224  SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 370
                   LR++  W G T    Q  + P C + E G+ E+ I+SP++ T         A+
Sbjct: 847  PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYVDENGNFEIEIRSPYHRTPLRLRDAQVAS 906

Query: 371  FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 493
              +    F+ I  S P+AP    +K    ++I  I + PDL
Sbjct: 907  SFTSTLNFYAI--SGPIAPSGEIAKMPVVVQIDEI-ALPDL 944

[16][TOP]
>UniRef100_B4YNP8 Polyprotein 2 n=1 Tax=Arabis mosaic virus RepID=B4YNP8_ARMV
          Length = 1118

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
 Frame = +2

Query: 44   MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 223
            + + P +  L T++A      L  +++     + Y+Y   +LS++LG+GG V+  VH  S
Sbjct: 795  LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICS 854

Query: 224  SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 370
                   LR++  W G T    Q  + P C I E G+ E+ I+SP++ T         A+
Sbjct: 855  PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDAQAAS 914

Query: 371  FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 493
              +    F+ I  S P+AP    +K    ++I+ I + PDL
Sbjct: 915  SFTSTLNFYAI--SGPIAPSGETAKMPVVVQINEI-ALPDL 952

[17][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
          Length = 515

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
 Frame = +2

Query: 149 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 322
           SY+  ++S  LG  GT+  SV S SS F +    I  W   T PT+ Q    PH  +   
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289

Query: 323 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 466
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337

[18][TOP]
>UniRef100_A0A9J7 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J7_ARMV
          Length = 1084

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
 Frame = +2

Query: 44   MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 223
            + + P +  L T++A      L  +++     + Y+Y   +LS++LGVGG V+  VH  S
Sbjct: 761  LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGVGGVVKGKVHICS 820

Query: 224  SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 370
                   LR++  W G T    Q  + P C I E G+ E+ I+SP++ T         A+
Sbjct: 821  PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDGQAAS 880

Query: 371  FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 493
              +    F+ I  S P+AP    +K    ++I  I + PDL
Sbjct: 881  SFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 918

[19][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
          Length = 515

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
 Frame = +2

Query: 152 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 325
           Y+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290

Query: 326 SGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 469
             E+ I++ F+S A       +  ++PLS P+AP+     +EF + I+
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIN 338

[20][TOP]
>UniRef100_B1A9X8 Polyprotein P2 (Fragment) n=1 Tax=Arabis mosaic virus
           RepID=B1A9X8_ARMV
          Length = 521

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
 Frame = +2

Query: 44  MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 223
           + + P +  L T++A      L  +++     + Y+Y   +LS++LG+GG V+  VH  S
Sbjct: 198 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICS 257

Query: 224 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 370
                  LR++  W G T    Q  + P C I E G+ E+ I+SP++ T         A+
Sbjct: 258 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDAQSAS 317

Query: 371 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 493
             +    F+ I  S P+AP    ++    ++I+ I + PDL
Sbjct: 318 SFTSTLNFYAI--SGPIAPSGETARMPVVVQINEI-ALPDL 355

[21][TOP]
>UniRef100_UPI00003FE532 capsid protein n=1 Tax=Arabis mosaic virus RepID=UPI00003FE532
          Length = 505

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
 Frame = +2

Query: 44  MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 223
           + + P +  L T++A      L  +++     + Y+Y   +LS++LG+GG V+  VH  S
Sbjct: 182 LTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICS 241

Query: 224 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 370
                  LR++  W G T    Q  + P C I E G+ E+ I+SP++ T         A+
Sbjct: 242 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAAS 301

Query: 371 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 493
             +    F+ I  S P+AP    +K    ++I  I + PDL
Sbjct: 302 AFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 339

[22][TOP]
>UniRef100_Q91HK4 Coat protein n=1 Tax=Arabis mosaic virus strain NW RepID=POL2_ARMVN
          Length = 1110

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
 Frame = +2

Query: 44   MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 223
            + + P +  L T++A      L  +++     + Y+Y   +LS++LG+GG V+  VH  S
Sbjct: 787  LTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICS 846

Query: 224  SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 370
                   LR++  W G T    Q  + P C I E G+ E+ I+SP++ T         A+
Sbjct: 847  PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAAS 906

Query: 371  FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 493
              +    F+ I  S P+AP    +K    ++I  I + PDL
Sbjct: 907  AFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 944

[23][TOP]
>UniRef100_A0A9J8 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J8_ARMV
          Length = 1083

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
 Frame = +2

Query: 44   MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 223
            + + P +  L T++A      L  +++     + Y+Y   +LS++LG+GG V+  VH  S
Sbjct: 760  LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGIHKVYNYNNTLLSYYLGIGGVVKGRVHICS 819

Query: 224  SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 370
                   LR++  W G T    Q  + P C I E G+ E+ I+SP++ T         A+
Sbjct: 820  PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDGQAAS 879

Query: 371  FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 493
              +    F+ I  S P+AP    +K    ++I  I + PDL
Sbjct: 880  SFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 917

[24][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
          Length = 515

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
 Frame = +2

Query: 149 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 322
           SY+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289

Query: 323 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 469
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I+
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIN 338

[25][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
          Length = 513

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
 Frame = +2

Query: 149 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 322
           SY+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287

Query: 323 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 466
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 335

[26][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
          Length = 1101

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
 Frame = +2

Query: 149  SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 322
            SY+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   
Sbjct: 816  SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875

Query: 323  GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 466
            G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I
Sbjct: 876  GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 923

[27][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
           RepID=Q5L492_TRSV
          Length = 515

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
 Frame = +2

Query: 149 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 322
           SY+  ++S  LG  GT+  SV S SS F +    I  W   T PT+ Q    PH  +   
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289

Query: 323 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 466
           G  E+  ++  +S++       +  ++PLS P+AP+     +EF + I
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337