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[1][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 209 bits (532), Expect = 1e-52
Identities = 102/191 (53%), Positives = 131/191 (68%), Gaps = 1/191 (0%)
Frame = +2
Query: 2 LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
L YPI P+ L DLD+ L+P +A+GT A T PL+ A K V+ S +YSYA G+LSHFL
Sbjct: 1017 LEYPISPKHLRDLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFL 1076
Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
GVGG + F V TSS FVS +LR+ +WG T+ Q QMPH D+ G + L+IQSPFY+
Sbjct: 1077 GVGGILHFKVQCTSSAFVSSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYA 1136
Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MV 538
TAN G A FWV P+SSPMAPE +ES E+YI+I GI++ LC+ INYKQ FGWF +V
Sbjct: 1137 TANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLV 1196
Query: 539 KPEGTDKEFQM 571
+ T+KE +
Sbjct: 1197 RRSTTNKEIAL 1207
[2][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 209 bits (531), Expect = 2e-52
Identities = 95/177 (53%), Positives = 127/177 (71%)
Frame = +2
Query: 2 LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
+TYPI E L D++++L P Q+A+G + + PL+ A + ++SG YSYA G+LSHFL
Sbjct: 173 VTYPISLEHLKDIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFL 232
Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
G+GGT+ F + TSS FV+ +LR+ +WG T T+ Q QMPH D L+IQSPFY+
Sbjct: 233 GIGGTIHFKIQCTSSAFVTARLRVALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYA 292
Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF 532
TANFG GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF
Sbjct: 293 TANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWF 349
[3][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 209 bits (531), Expect = 2e-52
Identities = 95/177 (53%), Positives = 127/177 (71%)
Frame = +2
Query: 2 LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
+TYPI E L D++++L P Q+A+G + + PL+ A + ++SG YSYA G+LSHFL
Sbjct: 983 VTYPISLEHLKDIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFL 1042
Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
G+GGT+ F + TSS FV+ +LR+ +WG T T+ Q QMPH D L+IQSPFY+
Sbjct: 1043 GIGGTIHFKIQCTSSAFVTARLRVALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYA 1102
Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF 532
TANFG GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF
Sbjct: 1103 TANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWF 1159
[4][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 204 bits (519), Expect = 4e-51
Identities = 97/180 (53%), Positives = 130/180 (72%)
Frame = +2
Query: 2 LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
L+YPI L+DL+++L+P Q+A+GT A P++LA K +TSG YSYA G+LSHFL
Sbjct: 172 LSYPIEARHLTDLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFL 231
Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
GVGGT+ F V +TSS FV+ KLRI +WGT P Q QMPH D+ L+IQSPF+S
Sbjct: 232 GVGGTIHFVVRTTSSAFVTSKLRIALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFS 291
Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
TANFG+ G+ F+V L +PMAPE VE+ E+YI+I GI++ P LC++INYKQRF W +++
Sbjct: 292 TANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLE 351
[5][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 204 bits (519), Expect = 4e-51
Identities = 97/180 (53%), Positives = 130/180 (72%)
Frame = +2
Query: 2 LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
L+YPI L+DL+++L+P Q+A+GT A P++LA K +TSG YSYA G+LSHFL
Sbjct: 1009 LSYPIEARHLTDLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFL 1068
Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
GVGGT+ F V +TSS FV+ KLRI +WGT P Q QMPH D+ L+IQSPF+S
Sbjct: 1069 GVGGTIHFVVRTTSSAFVTSKLRIALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFS 1128
Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
TANFG+ G+ F+V L +PMAPE VE+ E+YI+I GI++ P LC++INYKQRF W +++
Sbjct: 1129 TANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLE 1188
[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 203 bits (517), Expect = 7e-51
Identities = 91/180 (50%), Positives = 128/180 (71%)
Frame = +2
Query: 2 LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
LTYPI P L DLD+VL +A+GT T +P++LA + + + + YSYA G+LSHFL
Sbjct: 1005 LTYPIKPGHLEDLDLVLKSGSIAIGTYTMTKVPVSLAMRVDSAAKRQAYSYAAGVLSHFL 1064
Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
GVGG + FSVHST+S FVSC LR+ +WGT PT + Q+PH D+ L+IQSPF++
Sbjct: 1065 GVGGDIIFSVHSTASTFVSCSLRVALWGTIPTTEELAQIPHVDVTLDAKATLQIQSPFFA 1124
Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
TANFG +G F++ L +P+APE +E+ F++YI IHGI+++ LC++INY Q F WFM++
Sbjct: 1125 TANFGDDGTAFYIATLCAPLAPETMETGFQYYIHIHGINAKAHLCREINYNQHFAWFMLE 1184
[7][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 202 bits (515), Expect = 1e-50
Identities = 99/187 (52%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
Frame = +2
Query: 14 IGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGG 193
I P+ L DLD+ L+P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG
Sbjct: 1 ISPKHLRDLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGG 60
Query: 194 TVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANF 373
+ F V TSS FVS +LR+ +WG T+ Q QMPH D+ G + L+IQSPFY+TAN
Sbjct: 61 ILHFKVQCTSSAFVSSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANL 120
Query: 374 GSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEG 550
G A FWV P+SSPMAPE +ES E+YI+I GI++ LC+ INYKQ FGWF +V+
Sbjct: 121 GDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRST 180
Query: 551 TDKEFQM 571
T+KE +
Sbjct: 181 TNKEIAL 187
[8][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 199 bits (505), Expect = 2e-49
Identities = 91/180 (50%), Positives = 126/180 (70%)
Frame = +2
Query: 2 LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
LTYPI L DLD++L +A+GT T +P++LA + + + + YSYA GILSHFL
Sbjct: 172 LTYPIESRHLEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFL 231
Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
GVGG + FSVHST+S FVSC LRI +WGT PT + Q+PH D+ L+IQSPF++
Sbjct: 232 GVGGEIIFSVHSTASTFVSCSLRIALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFA 291
Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
TANFG +G F++ L +P+APE +E+ F++YI IHGI + +LC++INY Q F WFM++
Sbjct: 292 TANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLE 351
[9][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 199 bits (505), Expect = 2e-49
Identities = 91/180 (50%), Positives = 126/180 (70%)
Frame = +2
Query: 2 LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
LTYPI L DLD++L +A+GT T +P++LA + + + + YSYA GILSHFL
Sbjct: 1004 LTYPIESRHLEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFL 1063
Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
GVGG + FSVHST+S FVSC LRI +WGT PT + Q+PH D+ L+IQSPF++
Sbjct: 1064 GVGGEIIFSVHSTASTFVSCSLRIALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFA 1123
Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
TANFG +G F++ L +P+APE +E+ F++YI IHGI + +LC++INY Q F WFM++
Sbjct: 1124 TANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLE 1183
[10][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 198 bits (503), Expect = 3e-49
Identities = 97/181 (53%), Positives = 130/181 (71%)
Frame = +2
Query: 2 LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
LT + L+DLD++L+P QLA+GT+A T PL+ AEKS+T++ ETYSY+ G+LSHFL
Sbjct: 172 LTLSVESTHLADLDLLLAPQQLAIGTTATTNFPLSFAEKSITSTKRETYSYSAGLLSHFL 231
Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
G+GG +RF VHSTSS ++ KLR+ +W + + + H + G IQ+ +
Sbjct: 232 GIGGKLRFRVHSTSSCLLTSKLRVFLWEHSQPQCRRPKF-HTLTLMGLDWRAVIQAACCA 290
Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
TANFG GA+FW++PLS+P AP+ VE+KFEFYIRI GID PDLC+QINYKQRFGWFM+
Sbjct: 291 TANFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQRFGWFMIS 350
Query: 542 P 544
P
Sbjct: 351 P 351
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 121 bits (304), Expect = 3e-26
Identities = 63/181 (34%), Positives = 96/181 (53%)
Frame = +2
Query: 2 LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
L+YP L DLD+ L P +L LG T +PL+ A KS + YS+A L+HF
Sbjct: 185 LSYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQ 243
Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
G+GG + V+ S+ V+ KL I +W + H D G + +L I+ FY+
Sbjct: 244 GIGGVLHGVVYLVGSQLVASKLHISMWSKEQHVQHQAMNVHVDTDTGVAFDLPIKDAFYA 303
Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
++ +G GA + L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+
Sbjct: 304 SSVYGDSGAVIQITCLCSPMSPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVE 363
Query: 542 P 544
P
Sbjct: 364 P 364
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 120 bits (300), Expect = 1e-25
Identities = 64/181 (35%), Positives = 96/181 (53%)
Frame = +2
Query: 2 LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
L+YP L DLD+ L P +L LG T +PL+ A KS + YS+A L+HF
Sbjct: 173 LSYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQ 231
Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
G+GG + V+ S+ V+ + RI +W I H D G + +L I+ FY+
Sbjct: 232 GIGGVLHGVVYLVGSQLVASQSRISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYA 291
Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
++ +G GA V L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+
Sbjct: 292 SSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVE 351
Query: 542 P 544
P
Sbjct: 352 P 352
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 120 bits (300), Expect = 1e-25
Identities = 64/181 (35%), Positives = 96/181 (53%)
Frame = +2
Query: 2 LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
L+YP L DLD+ L P +L LG T +PL+ A KS + YS+A L+HF
Sbjct: 856 LSYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQ 914
Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYS 361
G+GG + V+ S+ V+ + RI +W I H D G + +L I+ FY+
Sbjct: 915 GIGGVLHGVVYLVGSQLVASQSRISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYA 974
Query: 362 TANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK 541
++ +G GA V L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+
Sbjct: 975 SSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVE 1034
Query: 542 P 544
P
Sbjct: 1035 P 1035
[14][TOP]
>UniRef100_A2ID55 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID55_9SECO
Length = 784
Score = 72.8 bits (177), Expect = 2e-11
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 5/181 (2%)
Frame = +2
Query: 2 LTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFL 181
L +PI P+ + ++DM + P ++ L T A+T L A ++G E + I+S +
Sbjct: 440 LEFPIVPQDIHEIDMRVGPFRIPLATRASTLLGFQFARLLTYSTGNEIPHFKQAIMSFYH 499
Query: 182 GVGGTVRFSVHSTSSKFVSCKLRIIIWGT-TP--TIAQTGQMPHCDIVEGGSGE--LRIQ 346
G GT + + V C L I + + TP Q + PH +++GG GE LRI
Sbjct: 500 GAAGTYHGEIIKVGTAQVQCDLLIYMSNSRTPKTNYYQIYREPHF-LLKGGEGEFALRIP 558
Query: 347 SPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFG 526
+P + A+F S G ++ + P AP+ V + FEF + IDS + + + F
Sbjct: 559 AP-EAIASFHSGGVFLHIVVAAGPTAPDGVAAPFEFMVNSKRIDSAGYVPRVMYQTMEFS 617
Query: 527 W 529
W
Sbjct: 618 W 618
[15][TOP]
>UniRef100_B5KFZ7 Polyprotein P2 n=1 Tax=Arabis mosaic virus RepID=B5KFZ7_ARMV
Length = 1110
Score = 57.4 bits (137), Expect = 8e-07
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +2
Query: 44 MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 223
+ + P + LGT++A L +++ + Y+Y +LS +LG+GG V+ VH S
Sbjct: 787 LTIPPLEYDLGTTSAYKSVSLLLGQTLVDGAHKVYNYNNTLLSFYLGIGGVVKGRVHICS 846
Query: 224 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 370
LR++ W G T Q + P C + E G+ E+ I+SP++ T A+
Sbjct: 847 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYVDENGNFEIEIRSPYHRTPLRLRDAQVAS 906
Query: 371 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 493
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 907 SFTSTLNFYAI--SGPIAPSGEIAKMPVVVQIDEI-ALPDL 944
[16][TOP]
>UniRef100_B4YNP8 Polyprotein 2 n=1 Tax=Arabis mosaic virus RepID=B4YNP8_ARMV
Length = 1118
Score = 57.4 bits (137), Expect = 8e-07
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Frame = +2
Query: 44 MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 223
+ + P + L T++A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 795 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICS 854
Query: 224 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 370
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 855 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDAQAAS 914
Query: 371 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 493
+ F+ I S P+AP +K ++I+ I + PDL
Sbjct: 915 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQINEI-ALPDL 952
[17][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +2
Query: 149 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 322
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 323 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 466
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337
[18][TOP]
>UniRef100_A0A9J7 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J7_ARMV
Length = 1084
Score = 57.0 bits (136), Expect = 1e-06
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +2
Query: 44 MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 223
+ + P + L T++A L +++ + Y+Y +LS++LGVGG V+ VH S
Sbjct: 761 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGVGGVVKGKVHICS 820
Query: 224 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 370
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 821 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDGQAAS 880
Query: 371 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 493
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 881 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 918
[19][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 56.2 bits (134), Expect = 2e-06
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +2
Query: 152 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 325
Y+ ++S LG GT+ SV S SS F + I W PT+ Q PH + G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290
Query: 326 SGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 469
E+ I++ F+S A + ++PLS P+AP+ +EF + I+
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIN 338
[20][TOP]
>UniRef100_B1A9X8 Polyprotein P2 (Fragment) n=1 Tax=Arabis mosaic virus
RepID=B1A9X8_ARMV
Length = 521
Score = 56.2 bits (134), Expect = 2e-06
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Frame = +2
Query: 44 MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 223
+ + P + L T++A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 198 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICS 257
Query: 224 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 370
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 258 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDAQSAS 317
Query: 371 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 493
+ F+ I S P+AP ++ ++I+ I + PDL
Sbjct: 318 SFTSTLNFYAI--SGPIAPSGETARMPVVVQINEI-ALPDL 355
[21][TOP]
>UniRef100_UPI00003FE532 capsid protein n=1 Tax=Arabis mosaic virus RepID=UPI00003FE532
Length = 505
Score = 55.8 bits (133), Expect = 2e-06
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +2
Query: 44 MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 223
+ + P + L T++A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 182 LTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICS 241
Query: 224 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 370
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 242 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAAS 301
Query: 371 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 493
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 302 AFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 339
[22][TOP]
>UniRef100_Q91HK4 Coat protein n=1 Tax=Arabis mosaic virus strain NW RepID=POL2_ARMVN
Length = 1110
Score = 55.8 bits (133), Expect = 2e-06
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +2
Query: 44 MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 223
+ + P + L T++A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 787 LTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICS 846
Query: 224 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 370
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 847 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAAS 906
Query: 371 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 493
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 907 AFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 944
[23][TOP]
>UniRef100_A0A9J8 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J8_ARMV
Length = 1083
Score = 55.5 bits (132), Expect = 3e-06
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +2
Query: 44 MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 223
+ + P + L T++A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 760 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGIHKVYNYNNTLLSYYLGIGGVVKGRVHICS 819
Query: 224 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 370
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 820 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDGQAAS 879
Query: 371 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 493
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 880 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 917
[24][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 55.5 bits (132), Expect = 3e-06
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Frame = +2
Query: 149 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 322
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289
Query: 323 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 469
G E+ I++ +S A + ++PLS P+AP+ +EF + I+
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIN 338
[25][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +2
Query: 149 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 322
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287
Query: 323 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 466
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 335
[26][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +2
Query: 149 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 322
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 816 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875
Query: 323 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 466
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 923
[27][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 54.3 bits (129), Expect = 7e-06
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +2
Query: 149 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 322
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 323 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 466
G E+ ++ +S++ + ++PLS P+AP+ +EF + I
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337