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[1][TOP] >UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides virus China/Mar2007 RepID=A8W7G1_9VIRU Length = 723 Score = 382 bits (980), Expect = e-104 Identities = 180/193 (93%), Positives = 186/193 (96%) Frame = +2 Query: 2 DYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETI 181 DYPTLLFTRNHISKR G LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETI Sbjct: 306 DYPTLLFTRNHISKRSGTLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETI 365 Query: 182 RGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT 361 RGSN YI+++AR YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT Sbjct: 366 RGSNHYIDRLARPYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT 425 Query: 362 YPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNL 541 YPDLDEHKLY RMDNLL+FLHTWYNNMTFLLPDGYAYRRT CG+PSGLYNTQYLDSFGNL Sbjct: 426 YPDLDEHKLYSRMDNLLYFLHTWYNNMTFLLPDGYAYRRTHCGVPSGLYNTQYLDSFGNL 485 Query: 542 FLIIDAMLEFGFT 580 FLIIDAM+EF FT Sbjct: 486 FLIIDAMIEFEFT 498 [2][TOP] >UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix partitivirus 1-W8 RepID=Q50LH7_9VIRU Length = 709 Score = 300 bits (769), Expect = 4e-80 Identities = 140/194 (72%), Positives = 161/194 (82%), Gaps = 4/194 (2%) Frame = +2 Query: 11 TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKP----SCCIMYGLET 178 T+LFTRNHIS RDG LK RPVYAVDD FI+ ELM++FPL + AR P CIMY ET Sbjct: 294 TMLFTRNHISDRDGFLKQRPVYAVDDFFILCELMISFPLHVMARYPINGIKSCIMYSFET 353 Query: 179 IRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYP 358 IRGSNRY++ IARD+ +FF++DWSS+DQR+PRVITDI++TDFLR LIVINHGYQPTYEYP Sbjct: 354 IRGSNRYLDSIARDFISFFTIDWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQPTYEYP 413 Query: 359 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGN 538 YPDL EH LY RM+NLLHFLHTWYNNM F+ DG+AY R+ G+PSGL NTQYLDSF N Sbjct: 414 AYPDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGFAYLRSAAGVPSGLLNTQYLDSFCN 473 Query: 539 LFLIIDAMLEFGFT 580 LFLIID + EFGFT Sbjct: 474 LFLIIDGLFEFGFT 487 [3][TOP] >UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa partitivirus V1-1 RepID=Q6BE43_9VIRU Length = 706 Score = 294 bits (752), Expect = 4e-78 Identities = 132/191 (69%), Positives = 158/191 (82%) Frame = +2 Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187 PT+LFTRNHIS RDG LK RPVYAVDD+F+I+E+MLTFPL + AR P CCIMYGLETIRG Sbjct: 293 PTMLFTRNHISDRDGNLKQRPVYAVDDLFLILEVMLTFPLLVMARLPECCIMYGLETIRG 352 Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYP 367 SN +I+ A+ + ++F++DWS YDQRLPR ITD+YYTDFL SLI+IN GYQPT +Y YP Sbjct: 353 SNHWIDSTAKRFRSYFTIDWSQYDQRLPRCITDLYYTDFLESLIIINFGYQPTADYADYP 412 Query: 368 DLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFL 547 DL ++ RM NLLHFLHTWYNNM ++ DG+AY R CG+PSGL+NTQYLDSFGNL+L Sbjct: 413 DLTPDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGVPSGLFNTQYLDSFGNLYL 472 Query: 548 IIDAMLEFGFT 580 IID MLEFG + Sbjct: 473 IIDGMLEFGIS 483 [4][TOP] >UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1 RepID=Q5GHF1_9VIRU Length = 706 Score = 290 bits (742), Expect = 6e-77 Identities = 129/189 (68%), Positives = 158/189 (83%) Frame = +2 Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187 PT+LFTRNHIS RDG LK RPVYA+DD+FI +E M+TFPL + ARK CCIMYG ETIRG Sbjct: 292 PTMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESMITFPLHVMARKIECCIMYGYETIRG 351 Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYP 367 SNR I++IA + +FF++DWS +DQRLPRVITDI+++DFL +IVI+HGYQPTY+YP+YP Sbjct: 352 SNRQIDKIASSFRSFFTIDWSGFDQRLPRVITDIFWSDFLERMIVISHGYQPTYDYPSYP 411 Query: 368 DLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFL 547 DL K++ RMDN+L FLHTWYNN+ F+ DG+AY RTC G+PSGL NTQYLDSF NLFL Sbjct: 412 DLTPDKMFQRMDNILFFLHTWYNNLVFVTADGFAYIRTCAGVPSGLLNTQYLDSFSNLFL 471 Query: 548 IIDAMLEFG 574 I D ++EFG Sbjct: 472 IFDGLIEFG 480 [5][TOP] >UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus virus 1 RepID=D0EIN9_9VIRU Length = 502 Score = 282 bits (721), Expect = 2e-74 Identities = 124/189 (65%), Positives = 156/189 (82%) Frame = +2 Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187 P +LFTRNHIS RDG LK RPVYA+DD+FI +E +TFPL + ARK CCIMYG ETIRG Sbjct: 292 PVMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESKITFPLHVMARKIECCIMYGYETIRG 351 Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYP 367 SNR I+++A +Y ++F++DWS +DQRLPRVITDI++TDFL +IVI+HGYQPT++YP+YP Sbjct: 352 SNRQIDKLASNYKSYFTIDWSGFDQRLPRVITDIFWTDFLERMIVISHGYQPTFDYPSYP 411 Query: 368 DLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFL 547 DL K++ RM N+L FLHTWYNN+ ++ DG+AY RTC G+PSGL NTQYLDSF NLFL Sbjct: 412 DLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFL 471 Query: 548 IIDAMLEFG 574 I D ++EFG Sbjct: 472 IFDGLIEFG 480 [6][TOP] >UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1 RepID=Q9YX75_9VIRU Length = 673 Score = 266 bits (681), Expect = 7e-70 Identities = 119/191 (62%), Positives = 153/191 (80%) Frame = +2 Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187 PT+LFTRNHIS RDG LK RPVYAVDD+F+ IE MLTFP + ARKP CCIMYGLETIRG Sbjct: 289 PTMLFTRNHISDRDGILKQRPVYAVDDLFLTIESMLTFPAHVIARKPECCIMYGLETIRG 348 Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYP 367 SN+ +++IA DY +FF++DWS +DQRLP VI +++T+++ L+V+NHGY PTYEYP+YP Sbjct: 349 SNQILDKIASDYKSFFTIDWSGFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYEYPSYP 408 Query: 368 DLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFL 547 DL + + R+ NL+ FL TWY NM F+ DG++Y R G+PSG+ NTQ+LDSFGNLFL Sbjct: 409 DLTTNDMVSRLTNLITFLATWYFNMVFVTADGFSYVREHAGVPSGMLNTQFLDSFGNLFL 468 Query: 548 IIDAMLEFGFT 580 +ID ++EFG T Sbjct: 469 LIDGLIEFGST 479 [7][TOP] >UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus virus 1 RepID=B2L075_9VIRU Length = 185 Score = 244 bits (624), Expect = 3e-63 Identities = 106/163 (65%), Positives = 135/163 (82%) Frame = +2 Query: 86 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 265 D+FI +E M+TFPL + ARK CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR Sbjct: 1 DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60 Query: 266 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 445 LPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWYNN+ Sbjct: 61 LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120 Query: 446 FLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFG 574 ++ DG+AY RTC G+PSGL NTQYLDSF NLFLI D ++EFG Sbjct: 121 YVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFLIFDGLIEFG 163 [8][TOP] >UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani virus 717 RepID=Q9Q9X2_9VIRU Length = 730 Score = 236 bits (602), Expect = 1e-60 Identities = 110/192 (57%), Positives = 146/192 (76%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIR 184 +PT++FTRNHISKRDG LKVRPVYAVD++F+ +E ML FP T+QARKP CCIMYGLETIR Sbjct: 319 FPTMMFTRNHISKRDGTLKVRPVYAVDELFLDLECMLAFPATVQARKPECCIMYGLETIR 378 Query: 185 GSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY 364 GSN ++ +A+ + +F ++DWS YDQRLP I ++ +L SL++I+HGY PT EY Sbjct: 379 GSNIKLDSLAQGFISFATIDWSGYDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSEYED- 437 Query: 365 PDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLF 544 ++ ++ R NL++F TWY NM FL DG+A+RR G+PSG+ TQ+LDSFGNL+ Sbjct: 438 TSMNISDMFTRFFNLINFTATWYFNMVFLSADGFAFRRQFAGVPSGMLLTQFLDSFGNLY 497 Query: 545 LIIDAMLEFGFT 580 LIID++LEFG T Sbjct: 498 LIIDSLLEFGCT 509 [9][TOP] >UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella hypoxylon virus RepID=Q85055_AHV Length = 665 Score = 176 bits (445), Expect = 2e-42 Identities = 93/214 (43%), Positives = 129/214 (60%), Gaps = 23/214 (10%) Frame = +2 Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187 PT L R+HISKRD LKVRPVY I+I IE ML +PL QARK CCIMYGLETIRG Sbjct: 254 PTELLVRSHISKRDN-LKVRPVYNAPMIYIRIECMLFYPLLAQARKRDCCIMYGLETIRG 312 Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQP-------- 343 +E+I+ +++F +DWS +D P I++ ++ +L + I+I+HGY Sbjct: 313 GMNELERISNAFNSFLLIDWSRFDHLAPFTISNFFFKKWLPTKILIDHGYAQISNYHDHV 372 Query: 344 ---------------TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRR 478 + EY T P+ ++ NL+ FL WY +M F+ PDG+AYRR Sbjct: 373 HSFSAQAQSHGIPMISKEYQTPPEAT--VFAKKVLNLISFLERWYRDMVFVTPDGFAYRR 430 Query: 479 TCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFT 580 T G+PSG+ TQ++DSF NL +++D ++EFGFT Sbjct: 431 THAGVPSGILMTQFIDSFVNLTILLDGLIEFGFT 464 [10][TOP] >UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus 1 RepID=Q5DM90_9VIRU Length = 663 Score = 167 bits (424), Expect = 4e-40 Identities = 88/211 (41%), Positives = 126/211 (59%), Gaps = 21/211 (9%) Frame = +2 Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187 PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGLETIRG Sbjct: 258 PTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRG 316 Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY- 364 IE +A +S F +DWS +DQ +P + D++Y D++ +LI+++ GY + Y + Sbjct: 317 GMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHV 376 Query: 365 ---------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTC 484 +L+E ++++NLL F++TW+ M ++ PDG+AYRRT Sbjct: 377 HSFAAQARKLGVHGNSNLNEAPPETAIFANKVENLLKFINTWFKEMVYITPDGFAYRRTF 436 Query: 485 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577 G+PSG+ TQ +DSF NL ++ID++ EFGF Sbjct: 437 AGVPSGILCTQLIDSFVNLVVLIDSLFEFGF 467 [11][TOP] >UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica partitivirus RepID=Q6EM35_9VIRU Length = 663 Score = 166 bits (421), Expect = 9e-40 Identities = 88/211 (41%), Positives = 125/211 (59%), Gaps = 21/211 (9%) Frame = +2 Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187 PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYG ETIRG Sbjct: 258 PTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGFETIRG 316 Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY- 364 IE +A +S F +DWS +DQ +P + D++Y D++ +LI+I+ GY + Y + Sbjct: 317 GMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHNYNDHV 376 Query: 365 ---------------PDLDE-----HKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTC 484 +L+E ++++NLL F++TW+ M ++ PDG+AYRRT Sbjct: 377 HSFAAQARKLGVHGNSNLNEAPPEASVFANKVENLLKFINTWFKEMVYITPDGFAYRRTF 436 Query: 485 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577 G+PSG+ TQ +DSF NL ++ID++ EFGF Sbjct: 437 AGVPSGILCTQLIDSFVNLVVLIDSLFEFGF 467 [12][TOP] >UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica partitivirus RepID=Q6X9T6_9VIRU Length = 663 Score = 165 bits (418), Expect = 2e-39 Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 21/211 (9%) Frame = +2 Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187 PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGLETIRG Sbjct: 258 PTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRG 316 Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY- 364 IE +A +S F +DWS +DQ +P + D++Y D++ +LI+++ GY + Y + Sbjct: 317 GMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHV 376 Query: 365 ---------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTC 484 +L+E ++++NLL F++TW+ M ++ PDG+AY RT Sbjct: 377 HSFAAQARKLGVHGDSNLNEAPPEAAVFANKVENLLKFINTWFKEMVYITPDGFAYSRTF 436 Query: 485 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577 G+PSG+ TQ +DSF NL ++ID++ EFGF Sbjct: 437 AGVPSGILCTQLIDSFVNLVVLIDSLFEFGF 467 [13][TOP] >UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion annosum P-type partitivirus RepID=Q8QY51_9VIRU Length = 734 Score = 144 bits (363), Expect = 5e-33 Identities = 82/222 (36%), Positives = 118/222 (53%), Gaps = 31/222 (13%) Frame = +2 Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187 PT+++ R+ ISK LKVRPVY +F+++E MLT L Q RKP CI++ ETIRG Sbjct: 281 PTVMYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRG 339 Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT--YEYPT 361 + +I+ +++ F D+S +DQ P I ++ F+ +I ++ GYQ + Y Sbjct: 340 GMHELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQ 399 Query: 362 YPDLDEHKLYHRMD-----------------------------NLLHFLHTWYNNMTFLL 454 Y D K Y +D N+L F+ WY M F+ Sbjct: 400 YA-YDFEKKYDNLDKSEPKFQEFAKKSNNLFPKHVVAFSFVIFNILSFIWWWYVFMVFIT 458 Query: 455 PDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFT 580 PDGY Y R G+PSG++ TQ LDSF NLF+ +DA+LEFGF+ Sbjct: 459 PDGYGYVRLLAGVPSGIFMTQILDSFVNLFIFVDALLEFGFS 500 [14][TOP] >UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU Length = 576 Score = 98.6 bits (244), Expect = 3e-19 Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 6/197 (3%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLET 178 Y F R H+ + D P KVR V+ ++ ELM +PL + AR P +++G ET Sbjct: 202 YWNTAFARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYET 261 Query: 179 IRGSNRYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT 346 + G + A D YST +LDWS +D+ + + +R + GY PT Sbjct: 262 LTGGWSRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPT 321 Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLD 526 YP PD + R++NL +++ + +LPDG + GI SG + TQ LD Sbjct: 322 ISYPNAPDTNP----DRLENLWNWMTDAILTVPLMLPDGQLLQFNHSGIYSGYFQTQILD 377 Query: 527 SFGNLFLIIDAMLEFGF 577 S N +I + GF Sbjct: 378 SIYNCVMIYTILSRMGF 394 [15][TOP] >UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1 RepID=B2CGP3_9VIRU Length = 616 Score = 89.4 bits (220), Expect = 2e-16 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 11/202 (5%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 178 +P LL T+ I K+D P K+R ++ +II E ML + + PS +++G ET Sbjct: 230 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 289 Query: 179 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 337 G ++ RD +F +LDWS +D+R ++ I YT R+ + + GY Sbjct: 290 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 344 Query: 338 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYN 511 PT+ PT+P D K R++ L +L T N +LPDG YRR GIPSGL+ Sbjct: 345 VPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFI 401 Query: 512 TQYLDSFGNLFLIIDAMLEFGF 577 TQ LDS+ N ++ + GF Sbjct: 402 TQLLDSWYNYTMLATLLSALGF 423 [16][TOP] >UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1 RepID=D0EP81_9VIRU Length = 559 Score = 88.6 bits (218), Expect = 3e-16 Identities = 66/200 (33%), Positives = 98/200 (49%), Gaps = 9/200 (4%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 178 +P LL T+ I K+D P K+R ++ +II E ML + + PS +++G ET Sbjct: 174 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 233 Query: 179 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 337 G ++ RD +F +LDWS +D+R ++ I YT R+ + + GY Sbjct: 234 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 288 Query: 338 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQ 517 PT+ PT+P D K L L + +LPDG YRR GIPSGL+ TQ Sbjct: 289 VPTHSAPTHPQWDHTKAIRHERLWLWTLENLFE-APIILPDGRMYRRHFAGIPSGLFITQ 347 Query: 518 YLDSFGNLFLIIDAMLEFGF 577 LDS+ N ++ + GF Sbjct: 348 SLDSWYNYTMLATLLSALGF 367 [17][TOP] >UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=Q4KUU4_9VIRU Length = 616 Score = 87.4 bits (215), Expect = 7e-16 Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 10/201 (4%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178 +P LL T+ I K+D P K+R ++ +II + M + ++ S +++G ET Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289 Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346 G + Q+ +F +LDWS +D+R ++ I YT ++S + GY PT Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347 Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514 + P +P ++ K + L L W F +LPDG YRR GIPSGL+ T Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402 Query: 515 QYLDSFGNLFLIIDAMLEFGF 577 Q LDS+ N ++ + GF Sbjct: 403 QLLDSWYNYTMLATILHALGF 423 [18][TOP] >UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=A3R744_9VIRU Length = 616 Score = 87.4 bits (215), Expect = 7e-16 Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 10/201 (4%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178 +P LL T+ I K+D P K+R ++ +II + M + ++ S +++G ET Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289 Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346 G + Q+ +F +LDWS +D+R ++ I YT ++S + GY PT Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347 Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514 + P +P ++ K + L L W F +LPDG YRR GIPSGL+ T Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402 Query: 515 QYLDSFGNLFLIIDAMLEFGF 577 Q LDS+ N ++ + GF Sbjct: 403 QLLDSWYNYTMLATILHALGF 423 [19][TOP] >UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=A3R742_9VIRU Length = 616 Score = 87.4 bits (215), Expect = 7e-16 Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 10/201 (4%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178 +P LL T+ I K+D P K+R ++ +II + M + ++ S +++G ET Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289 Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346 G + Q+ +F +LDWS +D+R ++ I YT ++S + GY PT Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347 Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514 + P +P ++ K + L L W F +LPDG YRR GIPSGL+ T Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402 Query: 515 QYLDSFGNLFLIIDAMLEFGF 577 Q LDS+ N ++ + GF Sbjct: 403 QLLDSWYNYTMLATILHALGF 423 [20][TOP] >UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=A3R739_9VIRU Length = 616 Score = 87.4 bits (215), Expect = 7e-16 Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 10/201 (4%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178 +P LL T+ I K+D P K+R ++ +II + M + ++ S +++G ET Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289 Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346 G + Q+ +F +LDWS +D+R ++ I YT ++S + GY PT Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347 Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514 + P +P ++ K + L L W F +LPDG YRR GIPSGL+ T Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402 Query: 515 QYLDSFGNLFLIIDAMLEFGF 577 Q LDS+ N ++ + GF Sbjct: 403 QLLDSWYNYTMLATILHALGF 423 [21][TOP] >UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=B2M1T3_9VIRU Length = 616 Score = 85.9 bits (211), Expect = 2e-15 Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 10/201 (4%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178 +P LL T+ I K+D P K+R ++ +II + M + ++ S +++G ET Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289 Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346 G + Q+ +F +LDWS +D+R ++ I YT ++S + GY PT Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347 Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514 + P +P ++ K + L L W F +LPDG YRR GIPSGL+ T Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402 Query: 515 QYLDSFGNLFLIIDAMLEFGF 577 Q DS+ N ++ + GF Sbjct: 403 QLFDSWYNYTMLATILHALGF 423 [22][TOP] >UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning virus RepID=C0STM0_9VIRU Length = 580 Score = 84.7 bits (208), Expect = 5e-15 Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 6/197 (3%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETI 181 YP + T++ I P KVR ++ V + +++E M +PL R + +++G ET+ Sbjct: 199 YPINIHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETM 258 Query: 182 RGS----NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 346 G N + + SLDWS +D R L VI D+Y ++S N+GY PT Sbjct: 259 LGGWYKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPT 318 Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLD 526 +YP D H ++ NL ++ T L DG ++RT GI SG + TQ++D Sbjct: 319 VDYP---DSSTHP--QKLHNLWDWMLTALKFAPCALADGTIWQRTVRGIASGQFTTQFMD 373 Query: 527 SFGNLFLIIDAMLEFGF 577 S N +I+ + GF Sbjct: 374 SIYNGLMILTILSRMGF 390 [23][TOP] >UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus RepID=B8YNW9_9VIRU Length = 616 Score = 83.6 bits (205), Expect = 1e-14 Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 11/202 (5%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 178 +P LL T+ I K + P K+R ++ +II E ML + I+ + +++G ET Sbjct: 230 FPMLLHTKTAIVKHNDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPGTTPMLWGYET 289 Query: 179 IRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 337 G Y I +F +LDWS +D+R ++ I Y +RS + + GY Sbjct: 290 FTGGWFRLNHQLYCGMIKH---SFLTLDWSRFDKRAYFPLLRRILYP--VRSFLTFDEGY 344 Query: 338 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYN 511 PT+ P +P + K R++ L +L T N +LPDG YRR GIPSGL+ Sbjct: 345 VPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFI 401 Query: 512 TQYLDSFGNLFLIIDAMLEFGF 577 TQ LDS+ N ++ + GF Sbjct: 402 TQLLDSWYNYTMLATILSALGF 423 [24][TOP] >UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1 RepID=Q64FP0_WCCV1 Length = 616 Score = 80.9 bits (198), Expect = 7e-14 Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 11/193 (5%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 178 +P LL T+ I K++ P K+R ++ +II E M + I+ + +++G ET Sbjct: 230 FPMLLHTKTAIVKKNDPNKMRTIWGASKPWIIAETMFYWEYLAWIKHNPGATPMLWGYET 289 Query: 179 IRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 337 G + I R +F +LDWS +D+R ++ I YT +++ + GY Sbjct: 290 FTGGWFRLNHELFCGLIQR---SFLTLDWSRFDKRAYFPLLRRILYT--VKTFLTFEEGY 344 Query: 338 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYN 511 PT+ PT+P + + R++ L +L T N +LPDG YRR GIPSGL+ Sbjct: 345 VPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFI 401 Query: 512 TQYLDSFGNLFLI 550 TQ LDS+ N ++ Sbjct: 402 TQLLDSWYNYTML 414 [25][TOP] >UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry disease-associated mycovirus RepID=Q65A75_9VIRU Length = 621 Score = 79.3 bits (194), Expect = 2e-13 Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 5/196 (2%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 178 +P LL T+ I K+D P K+R ++ +II + ML + A+ +P +++ ET Sbjct: 232 FPMLLHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYET 291 Query: 179 IRGS-NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 349 G R + Y ++ +LDW +D++ I D + D + + + ++GY PT Sbjct: 292 FTGGWLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTK 350 Query: 350 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 529 +YP + R+ L + + + +LP+G+ Y R GIPSGL+ TQ +DS Sbjct: 351 DYPDTKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGLFITQLIDS 410 Query: 530 FGNLFLIIDAMLEFGF 577 + N ++ + GF Sbjct: 411 WYNYTMLATILSAMGF 426 [26][TOP] >UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric virus II RepID=Q7TDZ9_9VIRU Length = 610 Score = 78.2 bits (191), Expect = 4e-13 Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 12/203 (5%) Frame = +2 Query: 5 YPTLLFTRNHI-SKRDGPL---KVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMY 166 Y F R HI K+ G L KVR V+ + EL+ +PL + + +++ Sbjct: 237 YWNTAFARQHIVEKKPGILAQPKVRLVFGAPFTLLTAELIFIWPLQTHLLLMQDFSPMLW 296 Query: 167 GLETIRGS-NRYIEQIARDYST---FFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHG 334 G ETI G R ++ T +LDWS +D+ + +T +R +G Sbjct: 297 GYETILGGWYRLRGHLSGKIDTDKLVATLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNG 356 Query: 335 YQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLY 508 Y PT+ YP T D DE + R++NL +++ + L+PDG R T GI SG Sbjct: 357 YHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDGTMIRFTHSGIYSGYM 416 Query: 509 NTQYLDSFGNLFLIIDAMLEFGF 577 TQ LDS N+ +I + GF Sbjct: 417 QTQILDSLYNMVMIFTMVSRLGF 439 [27][TOP] >UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot associated partitivirus RepID=Q65A70_9VIRU Length = 621 Score = 77.8 bits (190), Expect = 6e-13 Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 5/196 (2%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 178 +P LL T+ I K+D P K+R ++ +II + ML + A+ +P +++ ET Sbjct: 232 FPMLLHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYET 291 Query: 179 IRGS-NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 349 G R + Y ++ +LDW +D++ I D + D + + + ++GY PT Sbjct: 292 FTGGWLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTK 350 Query: 350 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 529 +YP R+ L + + + +LP+G+ Y R GIPSGL+ TQ +DS Sbjct: 351 DYPDTKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGLFITQLIDS 410 Query: 530 FGNLFLIIDAMLEFGF 577 + N ++ + GF Sbjct: 411 WYNYTMLATILSAMGF 426 [28][TOP] >UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus 1 RepID=Q52UL1_9VIRU Length = 573 Score = 76.3 bits (186), Expect = 2e-12 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 5/180 (2%) Frame = +2 Query: 53 PLKVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIAR 217 P K+R V+ V I E M +PL + +++ ET+ G N Q + Sbjct: 196 PPKIRTVFGVPKSLIFAEAMFFWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQ 255 Query: 218 DYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 397 + T F+LDWS +D R+ + D D ++S Y PT YPT + R Sbjct: 256 SFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTYPTCRTNPQ-----R 309 Query: 398 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577 + NL +++ T Y + G YRR G+PSG++ TQ+ DSF N +++ + GF Sbjct: 310 LQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALGF 369 [29][TOP] >UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA mycovirus RepID=Q8B0U3_9VIRU Length = 598 Score = 75.5 bits (184), Expect = 3e-12 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 7/180 (3%) Frame = +2 Query: 59 KVRPVYAVDDIFIIIELMLTFPLTI--QARKPSCCIMYGLETIRGS--NRYIEQIARD-- 220 K+R V+ V ++ M +PL + + +++G ETI G N Y+E I Sbjct: 224 KIRVVFGVSKRHVLPSAMFFWPLFFFYLKNRETSPLLWGNETILGGGLNLYMECIIPRLY 283 Query: 221 YSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 397 +STF +DWSS+D R L +I + ++ R+ +GY PT +Y H Sbjct: 284 FSTFVMVDWSSFDLRSLFSIIRQDIFPNW-RTYFDFENGYIPTNKYRESKADPAH----- 337 Query: 398 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577 ++ L +++ M LPDG Y+R GIPSGL+ TQ+LDSF N+ +I+ + GF Sbjct: 338 LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSGLFTTQFLDSFYNMIMILTILGRMGF 397 [30][TOP] >UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum partitivirus S RepID=C7ENF4_9VIRU Length = 580 Score = 74.3 bits (181), Expect = 6e-12 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 7/193 (3%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCC---IMYGLE 175 Y T L R H+ + K+R V+ V + ++ E M +PL +++G E Sbjct: 191 YHTTLHARAHVVGHEDADKIRAVFGVPKLLLMAENMFIWPLQAYYLNQDTTKHHLLWGNE 250 Query: 176 TIRGSNRYIE---QIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQP 343 ++G + + Q R T SLDWS +D+R L VI D++ +S H Y+P Sbjct: 251 IMKGGWKKLWGQLQNGRISRTILSLDWSEFDKRALHEVIDDVH--SMWKSWFDFTH-YEP 307 Query: 344 TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYL 523 T Y + H+ R++NL ++ + L PDG Y+ T GI SG TQ L Sbjct: 308 TIFYEKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGFQQTQLL 364 Query: 524 DSFGNLFLIIDAM 562 DSF N+ +++ + Sbjct: 365 DSFVNMIMLLTVL 377 [31][TOP] >UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004 RepID=Q5XM56_9VIRU Length = 573 Score = 73.9 bits (180), Expect = 8e-12 Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 5/180 (2%) Frame = +2 Query: 53 PLKVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIAR 217 P K+R V+ V I E M ++PL + +++ ET+ G N Q + Sbjct: 196 PPKIRTVFGVPKSLIFAEAMFSWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQ 255 Query: 218 DYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 397 + T F+LDWS +D R+ + D D ++S Y PT PT + R Sbjct: 256 SFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTNPTCRTNPQ-----R 309 Query: 398 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577 + NL +++ T Y + G YRR G+PSG++ TQ+ DSF N +++ + GF Sbjct: 310 LQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALGF 369 [32][TOP] >UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum cryptic virus 1 RepID=B7ZGY8_9VIRU Length = 587 Score = 72.0 bits (175), Expect = 3e-11 Identities = 64/198 (32%), Positives = 89/198 (44%), Gaps = 13/198 (6%) Frame = +2 Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT----IQARKPSCCIMYGLE 175 P R+ I P KVR VY + I + M +PL I + P +++G E Sbjct: 205 PMRSHARSAIQPISDPNKVRFVYGYPKVGIFPQAMFFWPLFVYYHITGQSP---LLWGYE 261 Query: 176 TIRGS----NRYIEQIARDYSTFFSLDWSSYD-QRLPRVITDIYYTDFLRSLIVINHGYQ 340 T+ G N + + LDW +D L V DI + S +HGYQ Sbjct: 262 TMTGGWYRLNHELRSTPGISGSILELDWQGFDIHALFEVFDDIKNLSW--SFFDCSHGYQ 319 Query: 341 PTYEYP-TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQ 517 PT +Y T D D R+ NL ++ LPDG +RR+ G+PSGL+ TQ Sbjct: 320 PTKDYQGTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPSGLFITQ 373 Query: 518 YLDSFGN---LFLIIDAM 562 +LDS N +F I+DAM Sbjct: 374 WLDSVYNCIMIFTILDAM 391 [33][TOP] >UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1 Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU Length = 367 Score = 71.2 bits (173), Expect = 5e-11 Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 9/191 (4%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 178 +P LL + + K D P K+R ++ V ++II E + + I+ +++G ET Sbjct: 1 FPMLLHIKTAVVKFDAPNKLRTIWGVSKLWIISEAQIYWEYIAWIKLNPGITPMLWGYET 60 Query: 179 IRGSNRYIEQIAR---DYSTFFSLDWSSYDQRLPR-VITDIYYTDFLRSLIVINHGYQPT 346 G + + + T+ ++DWS +D+R +I I+ R +GY PT Sbjct: 61 FTGGWFRLYRTLHTPGENVTYITIDWSRFDKRAYFWLIRKIFIRT--RQFFDFENGYTPT 118 Query: 347 YEYP---TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQ 517 +YP T+PD ++ L + + + +LP+G+ Y+R GIPSGL+ TQ Sbjct: 119 KDYPFSPTHPD--------KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPSGLFITQ 170 Query: 518 YLDSFGNLFLI 550 +DS+ N ++ Sbjct: 171 LMDSWYNYVML 181 [34][TOP] >UniRef100_Q6BE42 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa partitivirus V1-2 RepID=Q6BE42_9VIRU Length = 538 Score = 70.1 bits (170), Expect = 1e-10 Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 19/192 (9%) Frame = +2 Query: 59 KVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGSNRYI--EQIARD--Y 223 KVR V+ V I E M +PL +I + +++ E++ G + E AR Y Sbjct: 154 KVRTVFGVPKYLIFAEAMFFWPLFSIYFTSANTPLLWNYESLNGGWHRLDSEYHARYTMY 213 Query: 224 STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEY-PTYPDLDE------H 382 S F+LDWS +D R +Y+T + + ++ + Y PT P LDE H Sbjct: 214 SPIFNLDWSEFDMR-------VYFTVWSDIIDRVSTYFCFCGRYCPTLPVLDEETGTQLH 266 Query: 383 KLY-------HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNL 541 Y R+ NL ++ Y NM + G ++R+ G+PSG++ TQ+ DSF N Sbjct: 267 PPYSEPFTNPQRLRNLWFWIRYAYFNMAAVTTTGKIFKRSFAGMPSGIFCTQFYDSFYNA 326 Query: 542 FLIIDAMLEFGF 577 +I+ +L G+ Sbjct: 327 VIIVTCLLALGY 338 [35][TOP] >UniRef100_C1KDH6 Putative RNA-dependent RNA polymerase n=1 Tax=Heterobasidion insulare T-type partitivirus RepID=C1KDH6_9VIRU Length = 585 Score = 69.3 bits (168), Expect = 2e-10 Identities = 60/184 (32%), Positives = 86/184 (46%), Gaps = 11/184 (5%) Frame = +2 Query: 59 KVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGSNRYIEQ---IARDYS 226 K+R +Y V I+ + M +PL + + +++G ET G I + R YS Sbjct: 223 KIRVIYGVSKRHILAQAMFFWPLFRYYIEEHTSPLLWGNETFTGGMLKIHNLISVPRLYS 282 Query: 227 -TFFSLDWSSYDQR----LPRVITDIY--YTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 385 T+ ++DWS +D R + R I D + Y DF Y PT TYPD Sbjct: 283 QTYLTVDWSGFDLRSLFTIQREIFDDWRTYFDFT--------AYIPTR---TYPDSKTDP 331 Query: 386 LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAML 565 + RM+ L ++ M F+LPD Y R IPSGL+ TQ+LDS NL +I + Sbjct: 332 I--RMERLWNWQRDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYNLIMIYTILS 389 Query: 566 EFGF 577 GF Sbjct: 390 AMGF 393 [36][TOP] >UniRef100_B7X9J3 Putative RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes isometric virus RepID=B7X9J3_9VIRU Length = 587 Score = 69.3 bits (168), Expect = 2e-10 Identities = 61/196 (31%), Positives = 90/196 (45%), Gaps = 6/196 (3%) Frame = +2 Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPS--CCIMYGLET 178 Y T L +R H+ K D P K+R V+ V + + E +P+ S +++G E Sbjct: 197 YWTNLRSRFHVVKADEPDKIRAVFGVPKLLLQAEQTFIWPMLSHYLDNSDRYPLLWGNEM 256 Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 346 + G R + + R +T SLDWS +D+R L VI D++ D RS + Y PT Sbjct: 257 MSGGWRKLNRTIYNGRTVNTVLSLDWSQFDKRALHEVIDDVH--DIWRSYFDFSF-YMPT 313 Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLD 526 YP P DE R++NL ++ L G + GI SG TQ LD Sbjct: 314 SFYPNAP-TDE----SRLENLWEWMTYNIKKYPIRLSSGKLSQWRFNGIASGFQQTQLLD 368 Query: 527 SFGNLFLIIDAMLEFG 574 SF N+ +I+ + G Sbjct: 369 SFVNMIMILTCLSRAG 384 [37][TOP] >UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus partitivirus RepID=A2VA07_9VIRU Length = 132 Score = 56.2 bits (134), Expect = 2e-06 Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 6/118 (5%) Frame = +2 Query: 11 TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETI 181 T L +R+H+ + D P K+R V+ V + +++E M + + + +++G ETI Sbjct: 8 TYLHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETI 67 Query: 182 RGS-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 346 RG + I Q+ ++ S+ S DWS +D + L VI D++ D +S N GY+P+ Sbjct: 68 RGGWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123