BB912712 ( RCE12018 )

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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
           virus China/Mar2007 RepID=A8W7G1_9VIRU
          Length = 723

 Score =  382 bits (980), Expect = e-104
 Identities = 180/193 (93%), Positives = 186/193 (96%)
 Frame = +2

Query: 2   DYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETI 181
           DYPTLLFTRNHISKR G LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETI
Sbjct: 306 DYPTLLFTRNHISKRSGTLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETI 365

Query: 182 RGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT 361
           RGSN YI+++AR YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT
Sbjct: 366 RGSNHYIDRLARPYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT 425

Query: 362 YPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNL 541
           YPDLDEHKLY RMDNLL+FLHTWYNNMTFLLPDGYAYRRT CG+PSGLYNTQYLDSFGNL
Sbjct: 426 YPDLDEHKLYSRMDNLLYFLHTWYNNMTFLLPDGYAYRRTHCGVPSGLYNTQYLDSFGNL 485

Query: 542 FLIIDAMLEFGFT 580
           FLIIDAM+EF FT
Sbjct: 486 FLIIDAMIEFEFT 498

[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
           partitivirus 1-W8 RepID=Q50LH7_9VIRU
          Length = 709

 Score =  300 bits (769), Expect = 4e-80
 Identities = 140/194 (72%), Positives = 161/194 (82%), Gaps = 4/194 (2%)
 Frame = +2

Query: 11  TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKP----SCCIMYGLET 178
           T+LFTRNHIS RDG LK RPVYAVDD FI+ ELM++FPL + AR P      CIMY  ET
Sbjct: 294 TMLFTRNHISDRDGFLKQRPVYAVDDFFILCELMISFPLHVMARYPINGIKSCIMYSFET 353

Query: 179 IRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYP 358
           IRGSNRY++ IARD+ +FF++DWSS+DQR+PRVITDI++TDFLR LIVINHGYQPTYEYP
Sbjct: 354 IRGSNRYLDSIARDFISFFTIDWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQPTYEYP 413

Query: 359 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGN 538
            YPDL EH LY RM+NLLHFLHTWYNNM F+  DG+AY R+  G+PSGL NTQYLDSF N
Sbjct: 414 AYPDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGFAYLRSAAGVPSGLLNTQYLDSFCN 473

Query: 539 LFLIIDAMLEFGFT 580
           LFLIID + EFGFT
Sbjct: 474 LFLIIDGLFEFGFT 487

[3][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-1 RepID=Q6BE43_9VIRU
          Length = 706

 Score =  294 bits (752), Expect = 4e-78
 Identities = 132/191 (69%), Positives = 158/191 (82%)
 Frame = +2

Query: 8   PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
           PT+LFTRNHIS RDG LK RPVYAVDD+F+I+E+MLTFPL + AR P CCIMYGLETIRG
Sbjct: 293 PTMLFTRNHISDRDGNLKQRPVYAVDDLFLILEVMLTFPLLVMARLPECCIMYGLETIRG 352

Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYP 367
           SN +I+  A+ + ++F++DWS YDQRLPR ITD+YYTDFL SLI+IN GYQPT +Y  YP
Sbjct: 353 SNHWIDSTAKRFRSYFTIDWSQYDQRLPRCITDLYYTDFLESLIIINFGYQPTADYADYP 412

Query: 368 DLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFL 547
           DL    ++ RM NLLHFLHTWYNNM ++  DG+AY R  CG+PSGL+NTQYLDSFGNL+L
Sbjct: 413 DLTPDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGVPSGLFNTQYLDSFGNLYL 472

Query: 548 IIDAMLEFGFT 580
           IID MLEFG +
Sbjct: 473 IIDGMLEFGIS 483

[4][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
           RepID=Q5GHF1_9VIRU
          Length = 706

 Score =  290 bits (742), Expect = 6e-77
 Identities = 129/189 (68%), Positives = 158/189 (83%)
 Frame = +2

Query: 8   PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
           PT+LFTRNHIS RDG LK RPVYA+DD+FI +E M+TFPL + ARK  CCIMYG ETIRG
Sbjct: 292 PTMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESMITFPLHVMARKIECCIMYGYETIRG 351

Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYP 367
           SNR I++IA  + +FF++DWS +DQRLPRVITDI+++DFL  +IVI+HGYQPTY+YP+YP
Sbjct: 352 SNRQIDKIASSFRSFFTIDWSGFDQRLPRVITDIFWSDFLERMIVISHGYQPTYDYPSYP 411

Query: 368 DLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFL 547
           DL   K++ RMDN+L FLHTWYNN+ F+  DG+AY RTC G+PSGL NTQYLDSF NLFL
Sbjct: 412 DLTPDKMFQRMDNILFFLHTWYNNLVFVTADGFAYIRTCAGVPSGLLNTQYLDSFSNLFL 471

Query: 548 IIDAMLEFG 574
           I D ++EFG
Sbjct: 472 IFDGLIEFG 480

[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=D0EIN9_9VIRU
          Length = 502

 Score =  282 bits (721), Expect = 2e-74
 Identities = 124/189 (65%), Positives = 156/189 (82%)
 Frame = +2

Query: 8   PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
           P +LFTRNHIS RDG LK RPVYA+DD+FI +E  +TFPL + ARK  CCIMYG ETIRG
Sbjct: 292 PVMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESKITFPLHVMARKIECCIMYGYETIRG 351

Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYP 367
           SNR I+++A +Y ++F++DWS +DQRLPRVITDI++TDFL  +IVI+HGYQPT++YP+YP
Sbjct: 352 SNRQIDKLASNYKSYFTIDWSGFDQRLPRVITDIFWTDFLERMIVISHGYQPTFDYPSYP 411

Query: 368 DLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFL 547
           DL   K++ RM N+L FLHTWYNN+ ++  DG+AY RTC G+PSGL NTQYLDSF NLFL
Sbjct: 412 DLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFL 471

Query: 548 IIDAMLEFG 574
           I D ++EFG
Sbjct: 472 IFDGLIEFG 480

[6][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
           RepID=Q9YX75_9VIRU
          Length = 673

 Score =  266 bits (681), Expect = 7e-70
 Identities = 119/191 (62%), Positives = 153/191 (80%)
 Frame = +2

Query: 8   PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
           PT+LFTRNHIS RDG LK RPVYAVDD+F+ IE MLTFP  + ARKP CCIMYGLETIRG
Sbjct: 289 PTMLFTRNHISDRDGILKQRPVYAVDDLFLTIESMLTFPAHVIARKPECCIMYGLETIRG 348

Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYP 367
           SN+ +++IA DY +FF++DWS +DQRLP VI  +++T+++  L+V+NHGY PTYEYP+YP
Sbjct: 349 SNQILDKIASDYKSFFTIDWSGFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYEYPSYP 408

Query: 368 DLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFL 547
           DL  + +  R+ NL+ FL TWY NM F+  DG++Y R   G+PSG+ NTQ+LDSFGNLFL
Sbjct: 409 DLTTNDMVSRLTNLITFLATWYFNMVFVTADGFSYVREHAGVPSGMLNTQFLDSFGNLFL 468

Query: 548 IIDAMLEFGFT 580
           +ID ++EFG T
Sbjct: 469 LIDGLIEFGST 479

[7][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=B2L075_9VIRU
          Length = 185

 Score =  244 bits (624), Expect = 3e-63
 Identities = 106/163 (65%), Positives = 135/163 (82%)
 Frame = +2

Query: 86  DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 265
           D+FI +E M+TFPL + ARK  CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1   DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60

Query: 266 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 445
           LPRVITDI++TDFL  +IVI+HGYQPT++YP+YPDL   K++ RM N+L FLHTWYNN+ 
Sbjct: 61  LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120

Query: 446 FLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFG 574
           ++  DG+AY RTC G+PSGL NTQYLDSF NLFLI D ++EFG
Sbjct: 121 YVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFLIFDGLIEFG 163

[8][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
           virus 717 RepID=Q9Q9X2_9VIRU
          Length = 730

 Score =  236 bits (602), Expect = 1e-60
 Identities = 110/192 (57%), Positives = 146/192 (76%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIR 184
           +PT++FTRNHISKRDG LKVRPVYAVD++F+ +E ML FP T+QARKP CCIMYGLETIR
Sbjct: 319 FPTMMFTRNHISKRDGTLKVRPVYAVDELFLDLECMLAFPATVQARKPECCIMYGLETIR 378

Query: 185 GSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY 364
           GSN  ++ +A+ + +F ++DWS YDQRLP  I   ++  +L SL++I+HGY PT EY   
Sbjct: 379 GSNIKLDSLAQGFISFATIDWSGYDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSEYED- 437

Query: 365 PDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLF 544
             ++   ++ R  NL++F  TWY NM FL  DG+A+RR   G+PSG+  TQ+LDSFGNL+
Sbjct: 438 TSMNISDMFTRFFNLINFTATWYFNMVFLSADGFAFRRQFAGVPSGMLLTQFLDSFGNLY 497

Query: 545 LIIDAMLEFGFT 580
           LIID++LEFG T
Sbjct: 498 LIIDSLLEFGCT 509

[9][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
           hypoxylon virus RepID=Q85055_AHV
          Length = 665

 Score =  176 bits (445), Expect = 2e-42
 Identities = 93/214 (43%), Positives = 129/214 (60%), Gaps = 23/214 (10%)
 Frame = +2

Query: 8   PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
           PT L  R+HISKRD  LKVRPVY    I+I IE ML +PL  QARK  CCIMYGLETIRG
Sbjct: 254 PTELLVRSHISKRDN-LKVRPVYNAPMIYIRIECMLFYPLLAQARKRDCCIMYGLETIRG 312

Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQP-------- 343
               +E+I+  +++F  +DWS +D   P  I++ ++  +L + I+I+HGY          
Sbjct: 313 GMNELERISNAFNSFLLIDWSRFDHLAPFTISNFFFKKWLPTKILIDHGYAQISNYHDHV 372

Query: 344 ---------------TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRR 478
                          + EY T P+        ++ NL+ FL  WY +M F+ PDG+AYRR
Sbjct: 373 HSFSAQAQSHGIPMISKEYQTPPEAT--VFAKKVLNLISFLERWYRDMVFVTPDGFAYRR 430

Query: 479 TCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFT 580
           T  G+PSG+  TQ++DSF NL +++D ++EFGFT
Sbjct: 431 THAGVPSGILMTQFIDSFVNLTILLDGLIEFGFT 464

[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
           1 RepID=Q5DM90_9VIRU
          Length = 663

 Score =  167 bits (424), Expect = 4e-40
 Identities = 88/211 (41%), Positives = 126/211 (59%), Gaps = 21/211 (9%)
 Frame = +2

Query: 8   PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
           PT L  R+HIS     LKVRPV     IF+ IE ML +PL  Q RK  C IMYGLETIRG
Sbjct: 258 PTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRG 316

Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY- 364
               IE +A  +S F  +DWS +DQ +P  + D++Y D++ +LI+++ GY   + Y  + 
Sbjct: 317 GMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHV 376

Query: 365 ---------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTC 484
                           +L+E         ++++NLL F++TW+  M ++ PDG+AYRRT 
Sbjct: 377 HSFAAQARKLGVHGNSNLNEAPPETAIFANKVENLLKFINTWFKEMVYITPDGFAYRRTF 436

Query: 485 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577
            G+PSG+  TQ +DSF NL ++ID++ EFGF
Sbjct: 437 AGVPSGILCTQLIDSFVNLVVLIDSLFEFGF 467

[11][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6EM35_9VIRU
          Length = 663

 Score =  166 bits (421), Expect = 9e-40
 Identities = 88/211 (41%), Positives = 125/211 (59%), Gaps = 21/211 (9%)
 Frame = +2

Query: 8   PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
           PT L  R+HIS     LKVRPV     IF+ IE ML +PL  Q RK  C IMYG ETIRG
Sbjct: 258 PTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGFETIRG 316

Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY- 364
               IE +A  +S F  +DWS +DQ +P  + D++Y D++ +LI+I+ GY   + Y  + 
Sbjct: 317 GMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHNYNDHV 376

Query: 365 ---------------PDLDE-----HKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTC 484
                           +L+E         ++++NLL F++TW+  M ++ PDG+AYRRT 
Sbjct: 377 HSFAAQARKLGVHGNSNLNEAPPEASVFANKVENLLKFINTWFKEMVYITPDGFAYRRTF 436

Query: 485 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577
            G+PSG+  TQ +DSF NL ++ID++ EFGF
Sbjct: 437 AGVPSGILCTQLIDSFVNLVVLIDSLFEFGF 467

[12][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6X9T6_9VIRU
          Length = 663

 Score =  165 bits (418), Expect = 2e-39
 Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 21/211 (9%)
 Frame = +2

Query: 8   PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
           PT L  R+HIS     LKVRPV     IF+ IE ML +PL  Q RK  C IMYGLETIRG
Sbjct: 258 PTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRG 316

Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY- 364
               IE +A  +S F  +DWS +DQ +P  + D++Y D++ +LI+++ GY   + Y  + 
Sbjct: 317 GMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHV 376

Query: 365 ---------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTC 484
                           +L+E         ++++NLL F++TW+  M ++ PDG+AY RT 
Sbjct: 377 HSFAAQARKLGVHGDSNLNEAPPEAAVFANKVENLLKFINTWFKEMVYITPDGFAYSRTF 436

Query: 485 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577
            G+PSG+  TQ +DSF NL ++ID++ EFGF
Sbjct: 437 AGVPSGILCTQLIDSFVNLVVLIDSLFEFGF 467

[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
           annosum P-type partitivirus RepID=Q8QY51_9VIRU
          Length = 734

 Score =  144 bits (363), Expect = 5e-33
 Identities = 82/222 (36%), Positives = 118/222 (53%), Gaps = 31/222 (13%)
 Frame = +2

Query: 8   PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
           PT+++ R+ ISK    LKVRPVY    +F+++E MLT  L  Q RKP  CI++  ETIRG
Sbjct: 281 PTVMYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRG 339

Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT--YEYPT 361
               + +I+ +++ F   D+S +DQ  P  I   ++  F+  +I ++ GYQ +  Y    
Sbjct: 340 GMHELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQ 399

Query: 362 YPDLDEHKLYHRMD-----------------------------NLLHFLHTWYNNMTFLL 454
           Y   D  K Y  +D                             N+L F+  WY  M F+ 
Sbjct: 400 YA-YDFEKKYDNLDKSEPKFQEFAKKSNNLFPKHVVAFSFVIFNILSFIWWWYVFMVFIT 458

Query: 455 PDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFT 580
           PDGY Y R   G+PSG++ TQ LDSF NLF+ +DA+LEFGF+
Sbjct: 459 PDGYGYVRLLAGVPSGIFMTQILDSFVNLFIFVDALLEFGFS 500

[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
          Length = 576

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 6/197 (3%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLET 178
           Y    F R H+ + D P KVR V+      ++ ELM  +PL +   AR P   +++G ET
Sbjct: 202 YWNTAFARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYET 261

Query: 179 IRGSNRYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT 346
           + G    +   A D    YST  +LDWS +D+     +    +   +R +     GY PT
Sbjct: 262 LTGGWSRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPT 321

Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLD 526
             YP  PD +      R++NL +++      +  +LPDG   +    GI SG + TQ LD
Sbjct: 322 ISYPNAPDTNP----DRLENLWNWMTDAILTVPLMLPDGQLLQFNHSGIYSGYFQTQILD 377

Query: 527 SFGNLFLIIDAMLEFGF 577
           S  N  +I   +   GF
Sbjct: 378 SIYNCVMIYTILSRMGF 394

[15][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
           RepID=B2CGP3_9VIRU
          Length = 616

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 11/202 (5%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 178
           +P LL T+  I K+D P K+R ++     +II E ML +      +  PS   +++G ET
Sbjct: 230 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 289

Query: 179 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 337
             G      ++ RD        +F +LDWS +D+R    ++  I YT   R+ +  + GY
Sbjct: 290 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 344

Query: 338 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYN 511
            PT+  PT+P  D  K   R++ L  +L T  N      +LPDG  YRR   GIPSGL+ 
Sbjct: 345 VPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFI 401

Query: 512 TQYLDSFGNLFLIIDAMLEFGF 577
           TQ LDS+ N  ++   +   GF
Sbjct: 402 TQLLDSWYNYTMLATLLSALGF 423

[16][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
           cryptic virus 1 RepID=D0EP81_9VIRU
          Length = 559

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 66/200 (33%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 178
           +P LL T+  I K+D P K+R ++     +II E ML +      +  PS   +++G ET
Sbjct: 174 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 233

Query: 179 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 337
             G      ++ RD        +F +LDWS +D+R    ++  I YT   R+ +  + GY
Sbjct: 234 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 288

Query: 338 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQ 517
            PT+  PT+P  D  K        L  L   +     +LPDG  YRR   GIPSGL+ TQ
Sbjct: 289 VPTHSAPTHPQWDHTKAIRHERLWLWTLENLFE-APIILPDGRMYRRHFAGIPSGLFITQ 347

Query: 518 YLDSFGNLFLIIDAMLEFGF 577
            LDS+ N  ++   +   GF
Sbjct: 348 SLDSWYNYTMLATLLSALGF 367

[17][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=Q4KUU4_9VIRU
          Length = 616

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178
           +P LL T+  I K+D P K+R ++     +II + M    +   ++    S  +++G ET
Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289

Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346
             G    + Q+        +F +LDWS +D+R    ++  I YT  ++S +    GY PT
Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347

Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514
           +  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GIPSGL+ T
Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402

Query: 515 QYLDSFGNLFLIIDAMLEFGF 577
           Q LDS+ N  ++   +   GF
Sbjct: 403 QLLDSWYNYTMLATILHALGF 423

[18][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R744_9VIRU
          Length = 616

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178
           +P LL T+  I K+D P K+R ++     +II + M    +   ++    S  +++G ET
Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289

Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346
             G    + Q+        +F +LDWS +D+R    ++  I YT  ++S +    GY PT
Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347

Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514
           +  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GIPSGL+ T
Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402

Query: 515 QYLDSFGNLFLIIDAMLEFGF 577
           Q LDS+ N  ++   +   GF
Sbjct: 403 QLLDSWYNYTMLATILHALGF 423

[19][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R742_9VIRU
          Length = 616

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178
           +P LL T+  I K+D P K+R ++     +II + M    +   ++    S  +++G ET
Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289

Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346
             G    + Q+        +F +LDWS +D+R    ++  I YT  ++S +    GY PT
Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347

Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514
           +  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GIPSGL+ T
Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402

Query: 515 QYLDSFGNLFLIIDAMLEFGF 577
           Q LDS+ N  ++   +   GF
Sbjct: 403 QLLDSWYNYTMLATILHALGF 423

[20][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R739_9VIRU
          Length = 616

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178
           +P LL T+  I K+D P K+R ++     +II + M    +   ++    S  +++G ET
Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289

Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346
             G    + Q+        +F +LDWS +D+R    ++  I YT  ++S +    GY PT
Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347

Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514
           +  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GIPSGL+ T
Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402

Query: 515 QYLDSFGNLFLIIDAMLEFGF 577
           Q LDS+ N  ++   +   GF
Sbjct: 403 QLLDSWYNYTMLATILHALGF 423

[21][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=B2M1T3_9VIRU
          Length = 616

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178
           +P LL T+  I K+D P K+R ++     +II + M    +   ++    S  +++G ET
Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289

Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346
             G    + Q+        +F +LDWS +D+R    ++  I YT  ++S +    GY PT
Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347

Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514
           +  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GIPSGL+ T
Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402

Query: 515 QYLDSFGNLFLIIDAMLEFGF 577
           Q  DS+ N  ++   +   GF
Sbjct: 403 QLFDSWYNYTMLATILHALGF 423

[22][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
           virus RepID=C0STM0_9VIRU
          Length = 580

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 6/197 (3%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETI 181
           YP  + T++ I     P KVR ++ V  + +++E M  +PL    R +    +++G ET+
Sbjct: 199 YPINIHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETM 258

Query: 182 RGS----NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 346
            G     N  +        +  SLDWS +D R L  VI D+Y    ++S    N+GY PT
Sbjct: 259 LGGWYKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPT 318

Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLD 526
            +YP   D   H    ++ NL  ++ T        L DG  ++RT  GI SG + TQ++D
Sbjct: 319 VDYP---DSSTHP--QKLHNLWDWMLTALKFAPCALADGTIWQRTVRGIASGQFTTQFMD 373

Query: 527 SFGNLFLIIDAMLEFGF 577
           S  N  +I+  +   GF
Sbjct: 374 SIYNGLMILTILSRMGF 390

[23][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
           RepID=B8YNW9_9VIRU
          Length = 616

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 178
           +P LL T+  I K + P K+R ++     +II E ML +     I+    +  +++G ET
Sbjct: 230 FPMLLHTKTAIVKHNDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPGTTPMLWGYET 289

Query: 179 IRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 337
             G         Y   I     +F +LDWS +D+R    ++  I Y   +RS +  + GY
Sbjct: 290 FTGGWFRLNHQLYCGMIKH---SFLTLDWSRFDKRAYFPLLRRILYP--VRSFLTFDEGY 344

Query: 338 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYN 511
            PT+  P +P  +  K   R++ L  +L T  N      +LPDG  YRR   GIPSGL+ 
Sbjct: 345 VPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFI 401

Query: 512 TQYLDSFGNLFLIIDAMLEFGF 577
           TQ LDS+ N  ++   +   GF
Sbjct: 402 TQLLDSWYNYTMLATILSALGF 423

[24][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
           RepID=Q64FP0_WCCV1
          Length = 616

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 11/193 (5%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 178
           +P LL T+  I K++ P K+R ++     +II E M  +     I+    +  +++G ET
Sbjct: 230 FPMLLHTKTAIVKKNDPNKMRTIWGASKPWIIAETMFYWEYLAWIKHNPGATPMLWGYET 289

Query: 179 IRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 337
             G         +   I R   +F +LDWS +D+R    ++  I YT  +++ +    GY
Sbjct: 290 FTGGWFRLNHELFCGLIQR---SFLTLDWSRFDKRAYFPLLRRILYT--VKTFLTFEEGY 344

Query: 338 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYN 511
            PT+  PT+P   +  +  R++ L  +L T  N      +LPDG  YRR   GIPSGL+ 
Sbjct: 345 VPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFI 401

Query: 512 TQYLDSFGNLFLI 550
           TQ LDS+ N  ++
Sbjct: 402 TQLLDSWYNYTML 414

[25][TOP]
>UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry
           disease-associated mycovirus RepID=Q65A75_9VIRU
          Length = 621

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 178
           +P LL T+  I K+D P K+R ++     +II + ML +     A+ +P    +++  ET
Sbjct: 232 FPMLLHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYET 291

Query: 179 IRGS-NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 349
             G   R    +   Y   ++ +LDW  +D++    I D  + D + + +  ++GY PT 
Sbjct: 292 FTGGWLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTK 350

Query: 350 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 529
           +YP        +   R+  L  +    + +   +LP+G+ Y R   GIPSGL+ TQ +DS
Sbjct: 351 DYPDTKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGLFITQLIDS 410

Query: 530 FGNLFLIIDAMLEFGF 577
           + N  ++   +   GF
Sbjct: 411 WYNYTMLATILSAMGF 426

[26][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
           virus II RepID=Q7TDZ9_9VIRU
          Length = 610

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
 Frame = +2

Query: 5   YPTLLFTRNHI-SKRDGPL---KVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMY 166
           Y    F R HI  K+ G L   KVR V+      +  EL+  +PL   +   +    +++
Sbjct: 237 YWNTAFARQHIVEKKPGILAQPKVRLVFGAPFTLLTAELIFIWPLQTHLLLMQDFSPMLW 296

Query: 167 GLETIRGS-NRYIEQIARDYST---FFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHG 334
           G ETI G   R    ++    T     +LDWS +D+     +    +T  +R      +G
Sbjct: 297 GYETILGGWYRLRGHLSGKIDTDKLVATLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNG 356

Query: 335 YQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLY 508
           Y PT+ YP  T  D DE  +  R++NL +++      +  L+PDG   R T  GI SG  
Sbjct: 357 YHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDGTMIRFTHSGIYSGYM 416

Query: 509 NTQYLDSFGNLFLIIDAMLEFGF 577
            TQ LDS  N+ +I   +   GF
Sbjct: 417 QTQILDSLYNMVMIFTMVSRLGF 439

[27][TOP]
>UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot
           associated partitivirus RepID=Q65A70_9VIRU
          Length = 621

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 178
           +P LL T+  I K+D P K+R ++     +II + ML +     A+ +P    +++  ET
Sbjct: 232 FPMLLHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYET 291

Query: 179 IRGS-NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 349
             G   R    +   Y   ++ +LDW  +D++    I D  + D + + +  ++GY PT 
Sbjct: 292 FTGGWLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTK 350

Query: 350 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 529
           +YP            R+  L  +    + +   +LP+G+ Y R   GIPSGL+ TQ +DS
Sbjct: 351 DYPDTKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGLFITQLIDS 410

Query: 530 FGNLFLIIDAMLEFGF 577
           + N  ++   +   GF
Sbjct: 411 WYNYTMLATILSAMGF 426

[28][TOP]
>UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus
           1 RepID=Q52UL1_9VIRU
          Length = 573

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
 Frame = +2

Query: 53  PLKVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIAR 217
           P K+R V+ V    I  E M  +PL +         +++  ET+ G     N    Q  +
Sbjct: 196 PPKIRTVFGVPKSLIFAEAMFFWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQ 255

Query: 218 DYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 397
            + T F+LDWS +D R+   + D    D ++S       Y PT  YPT     +     R
Sbjct: 256 SFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTYPTCRTNPQ-----R 309

Query: 398 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577
           + NL +++ T Y +       G  YRR   G+PSG++ TQ+ DSF N  +++  +   GF
Sbjct: 310 LQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALGF 369

[29][TOP]
>UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA
           mycovirus RepID=Q8B0U3_9VIRU
          Length = 598

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
 Frame = +2

Query: 59  KVRPVYAVDDIFIIIELMLTFPLTI--QARKPSCCIMYGLETIRGS--NRYIEQIARD-- 220
           K+R V+ V    ++   M  +PL       + +  +++G ETI G   N Y+E I     
Sbjct: 224 KIRVVFGVSKRHVLPSAMFFWPLFFFYLKNRETSPLLWGNETILGGGLNLYMECIIPRLY 283

Query: 221 YSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 397
           +STF  +DWSS+D R L  +I    + ++ R+     +GY PT +Y        H     
Sbjct: 284 FSTFVMVDWSSFDLRSLFSIIRQDIFPNW-RTYFDFENGYIPTNKYRESKADPAH----- 337

Query: 398 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577
           ++ L +++      M   LPDG  Y+R   GIPSGL+ TQ+LDSF N+ +I+  +   GF
Sbjct: 338 LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSGLFTTQFLDSFYNMIMILTILGRMGF 397

[30][TOP]
>UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum
           partitivirus S RepID=C7ENF4_9VIRU
          Length = 580

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 7/193 (3%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCC---IMYGLE 175
           Y T L  R H+   +   K+R V+ V  + ++ E M  +PL             +++G E
Sbjct: 191 YHTTLHARAHVVGHEDADKIRAVFGVPKLLLMAENMFIWPLQAYYLNQDTTKHHLLWGNE 250

Query: 176 TIRGSNRYIE---QIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQP 343
            ++G  + +    Q  R   T  SLDWS +D+R L  VI D++     +S     H Y+P
Sbjct: 251 IMKGGWKKLWGQLQNGRISRTILSLDWSEFDKRALHEVIDDVH--SMWKSWFDFTH-YEP 307

Query: 344 TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYL 523
           T  Y      + H+   R++NL  ++     +   L PDG  Y+ T  GI SG   TQ L
Sbjct: 308 TIFYEKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGFQQTQLL 364

Query: 524 DSFGNLFLIIDAM 562
           DSF N+ +++  +
Sbjct: 365 DSFVNMIMLLTVL 377

[31][TOP]
>UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004
           RepID=Q5XM56_9VIRU
          Length = 573

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
 Frame = +2

Query: 53  PLKVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIAR 217
           P K+R V+ V    I  E M ++PL +         +++  ET+ G     N    Q  +
Sbjct: 196 PPKIRTVFGVPKSLIFAEAMFSWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQ 255

Query: 218 DYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 397
            + T F+LDWS +D R+   + D    D ++S       Y PT   PT     +     R
Sbjct: 256 SFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTNPTCRTNPQ-----R 309

Query: 398 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577
           + NL +++ T Y +       G  YRR   G+PSG++ TQ+ DSF N  +++  +   GF
Sbjct: 310 LQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALGF 369

[32][TOP]
>UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum
           cryptic virus 1 RepID=B7ZGY8_9VIRU
          Length = 587

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 64/198 (32%), Positives = 89/198 (44%), Gaps = 13/198 (6%)
 Frame = +2

Query: 8   PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT----IQARKPSCCIMYGLE 175
           P     R+ I     P KVR VY    + I  + M  +PL     I  + P   +++G E
Sbjct: 205 PMRSHARSAIQPISDPNKVRFVYGYPKVGIFPQAMFFWPLFVYYHITGQSP---LLWGYE 261

Query: 176 TIRGS----NRYIEQIARDYSTFFSLDWSSYD-QRLPRVITDIYYTDFLRSLIVINHGYQ 340
           T+ G     N  +        +   LDW  +D   L  V  DI    +  S    +HGYQ
Sbjct: 262 TMTGGWYRLNHELRSTPGISGSILELDWQGFDIHALFEVFDDIKNLSW--SFFDCSHGYQ 319

Query: 341 PTYEYP-TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQ 517
           PT +Y  T  D D      R+ NL  ++          LPDG  +RR+  G+PSGL+ TQ
Sbjct: 320 PTKDYQGTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPSGLFITQ 373

Query: 518 YLDSFGN---LFLIIDAM 562
           +LDS  N   +F I+DAM
Sbjct: 374 WLDSVYNCIMIFTILDAM 391

[33][TOP]
>UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1
           Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU
          Length = 367

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 178
           +P LL  +  + K D P K+R ++ V  ++II E  + +     I+       +++G ET
Sbjct: 1   FPMLLHIKTAVVKFDAPNKLRTIWGVSKLWIISEAQIYWEYIAWIKLNPGITPMLWGYET 60

Query: 179 IRGSNRYIEQIAR---DYSTFFSLDWSSYDQRLPR-VITDIYYTDFLRSLIVINHGYQPT 346
             G    + +      +  T+ ++DWS +D+R    +I  I+     R      +GY PT
Sbjct: 61  FTGGWFRLYRTLHTPGENVTYITIDWSRFDKRAYFWLIRKIFIRT--RQFFDFENGYTPT 118

Query: 347 YEYP---TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQ 517
            +YP   T+PD        ++  L  +    + +   +LP+G+ Y+R   GIPSGL+ TQ
Sbjct: 119 KDYPFSPTHPD--------KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPSGLFITQ 170

Query: 518 YLDSFGNLFLI 550
            +DS+ N  ++
Sbjct: 171 LMDSWYNYVML 181

[34][TOP]
>UniRef100_Q6BE42 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-2 RepID=Q6BE42_9VIRU
          Length = 538

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 19/192 (9%)
 Frame = +2

Query: 59  KVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGSNRYI--EQIARD--Y 223
           KVR V+ V    I  E M  +PL +I     +  +++  E++ G    +  E  AR   Y
Sbjct: 154 KVRTVFGVPKYLIFAEAMFFWPLFSIYFTSANTPLLWNYESLNGGWHRLDSEYHARYTMY 213

Query: 224 STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEY-PTYPDLDE------H 382
           S  F+LDWS +D R       +Y+T +   +  ++  +     Y PT P LDE      H
Sbjct: 214 SPIFNLDWSEFDMR-------VYFTVWSDIIDRVSTYFCFCGRYCPTLPVLDEETGTQLH 266

Query: 383 KLY-------HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNL 541
             Y        R+ NL  ++   Y NM  +   G  ++R+  G+PSG++ TQ+ DSF N 
Sbjct: 267 PPYSEPFTNPQRLRNLWFWIRYAYFNMAAVTTTGKIFKRSFAGMPSGIFCTQFYDSFYNA 326

Query: 542 FLIIDAMLEFGF 577
            +I+  +L  G+
Sbjct: 327 VIIVTCLLALGY 338

[35][TOP]
>UniRef100_C1KDH6 Putative RNA-dependent RNA polymerase n=1 Tax=Heterobasidion
           insulare T-type partitivirus RepID=C1KDH6_9VIRU
          Length = 585

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 60/184 (32%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
 Frame = +2

Query: 59  KVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGSNRYIEQ---IARDYS 226
           K+R +Y V    I+ + M  +PL      + +  +++G ET  G    I     + R YS
Sbjct: 223 KIRVIYGVSKRHILAQAMFFWPLFRYYIEEHTSPLLWGNETFTGGMLKIHNLISVPRLYS 282

Query: 227 -TFFSLDWSSYDQR----LPRVITDIY--YTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 385
            T+ ++DWS +D R    + R I D +  Y DF          Y PT    TYPD     
Sbjct: 283 QTYLTVDWSGFDLRSLFTIQREIFDDWRTYFDFT--------AYIPTR---TYPDSKTDP 331

Query: 386 LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAML 565
           +  RM+ L ++       M F+LPD   Y R    IPSGL+ TQ+LDS  NL +I   + 
Sbjct: 332 I--RMERLWNWQRDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYNLIMIYTILS 389

Query: 566 EFGF 577
             GF
Sbjct: 390 AMGF 393

[36][TOP]
>UniRef100_B7X9J3 Putative RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes
           isometric virus RepID=B7X9J3_9VIRU
          Length = 587

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 61/196 (31%), Positives = 90/196 (45%), Gaps = 6/196 (3%)
 Frame = +2

Query: 5   YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPS--CCIMYGLET 178
           Y T L +R H+ K D P K+R V+ V  + +  E    +P+       S    +++G E 
Sbjct: 197 YWTNLRSRFHVVKADEPDKIRAVFGVPKLLLQAEQTFIWPMLSHYLDNSDRYPLLWGNEM 256

Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 346
           + G  R + +     R  +T  SLDWS +D+R L  VI D++  D  RS    +  Y PT
Sbjct: 257 MSGGWRKLNRTIYNGRTVNTVLSLDWSQFDKRALHEVIDDVH--DIWRSYFDFSF-YMPT 313

Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLD 526
             YP  P  DE     R++NL  ++          L  G   +    GI SG   TQ LD
Sbjct: 314 SFYPNAP-TDE----SRLENLWEWMTYNIKKYPIRLSSGKLSQWRFNGIASGFQQTQLLD 368

Query: 527 SFGNLFLIIDAMLEFG 574
           SF N+ +I+  +   G
Sbjct: 369 SFVNMIMILTCLSRAG 384

[37][TOP]
>UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus
           partitivirus RepID=A2VA07_9VIRU
          Length = 132

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
 Frame = +2

Query: 11  TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETI 181
           T L +R+H+ + D P K+R V+ V  + +++E M  + +    +        +++G ETI
Sbjct: 8   TYLHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETI 67

Query: 182 RGS-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 346
           RG   + I Q+ ++  S+  S DWS +D + L  VI D++  D  +S    N GY+P+
Sbjct: 68  RGGWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123