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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
virus China/Mar2007 RepID=A8W7G1_9VIRU
Length = 723
Score = 382 bits (980), Expect = e-104
Identities = 180/193 (93%), Positives = 186/193 (96%)
Frame = +2
Query: 2 DYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETI 181
DYPTLLFTRNHISKR G LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETI
Sbjct: 306 DYPTLLFTRNHISKRSGTLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETI 365
Query: 182 RGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT 361
RGSN YI+++AR YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT
Sbjct: 366 RGSNHYIDRLARPYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT 425
Query: 362 YPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNL 541
YPDLDEHKLY RMDNLL+FLHTWYNNMTFLLPDGYAYRRT CG+PSGLYNTQYLDSFGNL
Sbjct: 426 YPDLDEHKLYSRMDNLLYFLHTWYNNMTFLLPDGYAYRRTHCGVPSGLYNTQYLDSFGNL 485
Query: 542 FLIIDAMLEFGFT 580
FLIIDAM+EF FT
Sbjct: 486 FLIIDAMIEFEFT 498
[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
partitivirus 1-W8 RepID=Q50LH7_9VIRU
Length = 709
Score = 300 bits (769), Expect = 4e-80
Identities = 140/194 (72%), Positives = 161/194 (82%), Gaps = 4/194 (2%)
Frame = +2
Query: 11 TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKP----SCCIMYGLET 178
T+LFTRNHIS RDG LK RPVYAVDD FI+ ELM++FPL + AR P CIMY ET
Sbjct: 294 TMLFTRNHISDRDGFLKQRPVYAVDDFFILCELMISFPLHVMARYPINGIKSCIMYSFET 353
Query: 179 IRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYP 358
IRGSNRY++ IARD+ +FF++DWSS+DQR+PRVITDI++TDFLR LIVINHGYQPTYEYP
Sbjct: 354 IRGSNRYLDSIARDFISFFTIDWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQPTYEYP 413
Query: 359 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGN 538
YPDL EH LY RM+NLLHFLHTWYNNM F+ DG+AY R+ G+PSGL NTQYLDSF N
Sbjct: 414 AYPDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGFAYLRSAAGVPSGLLNTQYLDSFCN 473
Query: 539 LFLIIDAMLEFGFT 580
LFLIID + EFGFT
Sbjct: 474 LFLIIDGLFEFGFT 487
[3][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-1 RepID=Q6BE43_9VIRU
Length = 706
Score = 294 bits (752), Expect = 4e-78
Identities = 132/191 (69%), Positives = 158/191 (82%)
Frame = +2
Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
PT+LFTRNHIS RDG LK RPVYAVDD+F+I+E+MLTFPL + AR P CCIMYGLETIRG
Sbjct: 293 PTMLFTRNHISDRDGNLKQRPVYAVDDLFLILEVMLTFPLLVMARLPECCIMYGLETIRG 352
Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYP 367
SN +I+ A+ + ++F++DWS YDQRLPR ITD+YYTDFL SLI+IN GYQPT +Y YP
Sbjct: 353 SNHWIDSTAKRFRSYFTIDWSQYDQRLPRCITDLYYTDFLESLIIINFGYQPTADYADYP 412
Query: 368 DLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFL 547
DL ++ RM NLLHFLHTWYNNM ++ DG+AY R CG+PSGL+NTQYLDSFGNL+L
Sbjct: 413 DLTPDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGVPSGLFNTQYLDSFGNLYL 472
Query: 548 IIDAMLEFGFT 580
IID MLEFG +
Sbjct: 473 IIDGMLEFGIS 483
[4][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
RepID=Q5GHF1_9VIRU
Length = 706
Score = 290 bits (742), Expect = 6e-77
Identities = 129/189 (68%), Positives = 158/189 (83%)
Frame = +2
Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
PT+LFTRNHIS RDG LK RPVYA+DD+FI +E M+TFPL + ARK CCIMYG ETIRG
Sbjct: 292 PTMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESMITFPLHVMARKIECCIMYGYETIRG 351
Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYP 367
SNR I++IA + +FF++DWS +DQRLPRVITDI+++DFL +IVI+HGYQPTY+YP+YP
Sbjct: 352 SNRQIDKIASSFRSFFTIDWSGFDQRLPRVITDIFWSDFLERMIVISHGYQPTYDYPSYP 411
Query: 368 DLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFL 547
DL K++ RMDN+L FLHTWYNN+ F+ DG+AY RTC G+PSGL NTQYLDSF NLFL
Sbjct: 412 DLTPDKMFQRMDNILFFLHTWYNNLVFVTADGFAYIRTCAGVPSGLLNTQYLDSFSNLFL 471
Query: 548 IIDAMLEFG 574
I D ++EFG
Sbjct: 472 IFDGLIEFG 480
[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=D0EIN9_9VIRU
Length = 502
Score = 282 bits (721), Expect = 2e-74
Identities = 124/189 (65%), Positives = 156/189 (82%)
Frame = +2
Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
P +LFTRNHIS RDG LK RPVYA+DD+FI +E +TFPL + ARK CCIMYG ETIRG
Sbjct: 292 PVMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESKITFPLHVMARKIECCIMYGYETIRG 351
Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYP 367
SNR I+++A +Y ++F++DWS +DQRLPRVITDI++TDFL +IVI+HGYQPT++YP+YP
Sbjct: 352 SNRQIDKLASNYKSYFTIDWSGFDQRLPRVITDIFWTDFLERMIVISHGYQPTFDYPSYP 411
Query: 368 DLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFL 547
DL K++ RM N+L FLHTWYNN+ ++ DG+AY RTC G+PSGL NTQYLDSF NLFL
Sbjct: 412 DLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFL 471
Query: 548 IIDAMLEFG 574
I D ++EFG
Sbjct: 472 IFDGLIEFG 480
[6][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
RepID=Q9YX75_9VIRU
Length = 673
Score = 266 bits (681), Expect = 7e-70
Identities = 119/191 (62%), Positives = 153/191 (80%)
Frame = +2
Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
PT+LFTRNHIS RDG LK RPVYAVDD+F+ IE MLTFP + ARKP CCIMYGLETIRG
Sbjct: 289 PTMLFTRNHISDRDGILKQRPVYAVDDLFLTIESMLTFPAHVIARKPECCIMYGLETIRG 348
Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYP 367
SN+ +++IA DY +FF++DWS +DQRLP VI +++T+++ L+V+NHGY PTYEYP+YP
Sbjct: 349 SNQILDKIASDYKSFFTIDWSGFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYEYPSYP 408
Query: 368 DLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFL 547
DL + + R+ NL+ FL TWY NM F+ DG++Y R G+PSG+ NTQ+LDSFGNLFL
Sbjct: 409 DLTTNDMVSRLTNLITFLATWYFNMVFVTADGFSYVREHAGVPSGMLNTQFLDSFGNLFL 468
Query: 548 IIDAMLEFGFT 580
+ID ++EFG T
Sbjct: 469 LIDGLIEFGST 479
[7][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=B2L075_9VIRU
Length = 185
Score = 244 bits (624), Expect = 3e-63
Identities = 106/163 (65%), Positives = 135/163 (82%)
Frame = +2
Query: 86 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 265
D+FI +E M+TFPL + ARK CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1 DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60
Query: 266 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 445
LPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWYNN+
Sbjct: 61 LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120
Query: 446 FLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFG 574
++ DG+AY RTC G+PSGL NTQYLDSF NLFLI D ++EFG
Sbjct: 121 YVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFLIFDGLIEFG 163
[8][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
virus 717 RepID=Q9Q9X2_9VIRU
Length = 730
Score = 236 bits (602), Expect = 1e-60
Identities = 110/192 (57%), Positives = 146/192 (76%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIR 184
+PT++FTRNHISKRDG LKVRPVYAVD++F+ +E ML FP T+QARKP CCIMYGLETIR
Sbjct: 319 FPTMMFTRNHISKRDGTLKVRPVYAVDELFLDLECMLAFPATVQARKPECCIMYGLETIR 378
Query: 185 GSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY 364
GSN ++ +A+ + +F ++DWS YDQRLP I ++ +L SL++I+HGY PT EY
Sbjct: 379 GSNIKLDSLAQGFISFATIDWSGYDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSEYED- 437
Query: 365 PDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLF 544
++ ++ R NL++F TWY NM FL DG+A+RR G+PSG+ TQ+LDSFGNL+
Sbjct: 438 TSMNISDMFTRFFNLINFTATWYFNMVFLSADGFAFRRQFAGVPSGMLLTQFLDSFGNLY 497
Query: 545 LIIDAMLEFGFT 580
LIID++LEFG T
Sbjct: 498 LIIDSLLEFGCT 509
[9][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
hypoxylon virus RepID=Q85055_AHV
Length = 665
Score = 176 bits (445), Expect = 2e-42
Identities = 93/214 (43%), Positives = 129/214 (60%), Gaps = 23/214 (10%)
Frame = +2
Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
PT L R+HISKRD LKVRPVY I+I IE ML +PL QARK CCIMYGLETIRG
Sbjct: 254 PTELLVRSHISKRDN-LKVRPVYNAPMIYIRIECMLFYPLLAQARKRDCCIMYGLETIRG 312
Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQP-------- 343
+E+I+ +++F +DWS +D P I++ ++ +L + I+I+HGY
Sbjct: 313 GMNELERISNAFNSFLLIDWSRFDHLAPFTISNFFFKKWLPTKILIDHGYAQISNYHDHV 372
Query: 344 ---------------TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRR 478
+ EY T P+ ++ NL+ FL WY +M F+ PDG+AYRR
Sbjct: 373 HSFSAQAQSHGIPMISKEYQTPPEAT--VFAKKVLNLISFLERWYRDMVFVTPDGFAYRR 430
Query: 479 TCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFT 580
T G+PSG+ TQ++DSF NL +++D ++EFGFT
Sbjct: 431 THAGVPSGILMTQFIDSFVNLTILLDGLIEFGFT 464
[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
1 RepID=Q5DM90_9VIRU
Length = 663
Score = 167 bits (424), Expect = 4e-40
Identities = 88/211 (41%), Positives = 126/211 (59%), Gaps = 21/211 (9%)
Frame = +2
Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGLETIRG
Sbjct: 258 PTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRG 316
Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY- 364
IE +A +S F +DWS +DQ +P + D++Y D++ +LI+++ GY + Y +
Sbjct: 317 GMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHV 376
Query: 365 ---------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTC 484
+L+E ++++NLL F++TW+ M ++ PDG+AYRRT
Sbjct: 377 HSFAAQARKLGVHGNSNLNEAPPETAIFANKVENLLKFINTWFKEMVYITPDGFAYRRTF 436
Query: 485 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577
G+PSG+ TQ +DSF NL ++ID++ EFGF
Sbjct: 437 AGVPSGILCTQLIDSFVNLVVLIDSLFEFGF 467
[11][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6EM35_9VIRU
Length = 663
Score = 166 bits (421), Expect = 9e-40
Identities = 88/211 (41%), Positives = 125/211 (59%), Gaps = 21/211 (9%)
Frame = +2
Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYG ETIRG
Sbjct: 258 PTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGFETIRG 316
Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY- 364
IE +A +S F +DWS +DQ +P + D++Y D++ +LI+I+ GY + Y +
Sbjct: 317 GMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHNYNDHV 376
Query: 365 ---------------PDLDE-----HKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTC 484
+L+E ++++NLL F++TW+ M ++ PDG+AYRRT
Sbjct: 377 HSFAAQARKLGVHGNSNLNEAPPEASVFANKVENLLKFINTWFKEMVYITPDGFAYRRTF 436
Query: 485 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577
G+PSG+ TQ +DSF NL ++ID++ EFGF
Sbjct: 437 AGVPSGILCTQLIDSFVNLVVLIDSLFEFGF 467
[12][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6X9T6_9VIRU
Length = 663
Score = 165 bits (418), Expect = 2e-39
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 21/211 (9%)
Frame = +2
Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGLETIRG
Sbjct: 258 PTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRG 316
Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY- 364
IE +A +S F +DWS +DQ +P + D++Y D++ +LI+++ GY + Y +
Sbjct: 317 GMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHV 376
Query: 365 ---------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTC 484
+L+E ++++NLL F++TW+ M ++ PDG+AY RT
Sbjct: 377 HSFAAQARKLGVHGDSNLNEAPPEAAVFANKVENLLKFINTWFKEMVYITPDGFAYSRTF 436
Query: 485 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577
G+PSG+ TQ +DSF NL ++ID++ EFGF
Sbjct: 437 AGVPSGILCTQLIDSFVNLVVLIDSLFEFGF 467
[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
annosum P-type partitivirus RepID=Q8QY51_9VIRU
Length = 734
Score = 144 bits (363), Expect = 5e-33
Identities = 82/222 (36%), Positives = 118/222 (53%), Gaps = 31/222 (13%)
Frame = +2
Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 187
PT+++ R+ ISK LKVRPVY +F+++E MLT L Q RKP CI++ ETIRG
Sbjct: 281 PTVMYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRG 339
Query: 188 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT--YEYPT 361
+ +I+ +++ F D+S +DQ P I ++ F+ +I ++ GYQ + Y
Sbjct: 340 GMHELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQ 399
Query: 362 YPDLDEHKLYHRMD-----------------------------NLLHFLHTWYNNMTFLL 454
Y D K Y +D N+L F+ WY M F+
Sbjct: 400 YA-YDFEKKYDNLDKSEPKFQEFAKKSNNLFPKHVVAFSFVIFNILSFIWWWYVFMVFIT 458
Query: 455 PDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFT 580
PDGY Y R G+PSG++ TQ LDSF NLF+ +DA+LEFGF+
Sbjct: 459 PDGYGYVRLLAGVPSGIFMTQILDSFVNLFIFVDALLEFGFS 500
[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
Length = 576
Score = 98.6 bits (244), Expect = 3e-19
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 6/197 (3%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLET 178
Y F R H+ + D P KVR V+ ++ ELM +PL + AR P +++G ET
Sbjct: 202 YWNTAFARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYET 261
Query: 179 IRGSNRYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT 346
+ G + A D YST +LDWS +D+ + + +R + GY PT
Sbjct: 262 LTGGWSRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPT 321
Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLD 526
YP PD + R++NL +++ + +LPDG + GI SG + TQ LD
Sbjct: 322 ISYPNAPDTNP----DRLENLWNWMTDAILTVPLMLPDGQLLQFNHSGIYSGYFQTQILD 377
Query: 527 SFGNLFLIIDAMLEFGF 577
S N +I + GF
Sbjct: 378 SIYNCVMIYTILSRMGF 394
[15][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
RepID=B2CGP3_9VIRU
Length = 616
Score = 89.4 bits (220), Expect = 2e-16
Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 11/202 (5%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 178
+P LL T+ I K+D P K+R ++ +II E ML + + PS +++G ET
Sbjct: 230 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 289
Query: 179 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 337
G ++ RD +F +LDWS +D+R ++ I YT R+ + + GY
Sbjct: 290 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 344
Query: 338 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYN 511
PT+ PT+P D K R++ L +L T N +LPDG YRR GIPSGL+
Sbjct: 345 VPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFI 401
Query: 512 TQYLDSFGNLFLIIDAMLEFGF 577
TQ LDS+ N ++ + GF
Sbjct: 402 TQLLDSWYNYTMLATLLSALGF 423
[16][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
cryptic virus 1 RepID=D0EP81_9VIRU
Length = 559
Score = 88.6 bits (218), Expect = 3e-16
Identities = 66/200 (33%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 178
+P LL T+ I K+D P K+R ++ +II E ML + + PS +++G ET
Sbjct: 174 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 233
Query: 179 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 337
G ++ RD +F +LDWS +D+R ++ I YT R+ + + GY
Sbjct: 234 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 288
Query: 338 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQ 517
PT+ PT+P D K L L + +LPDG YRR GIPSGL+ TQ
Sbjct: 289 VPTHSAPTHPQWDHTKAIRHERLWLWTLENLFE-APIILPDGRMYRRHFAGIPSGLFITQ 347
Query: 518 YLDSFGNLFLIIDAMLEFGF 577
LDS+ N ++ + GF
Sbjct: 348 SLDSWYNYTMLATLLSALGF 367
[17][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=Q4KUU4_9VIRU
Length = 616
Score = 87.4 bits (215), Expect = 7e-16
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178
+P LL T+ I K+D P K+R ++ +II + M + ++ S +++G ET
Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289
Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346
G + Q+ +F +LDWS +D+R ++ I YT ++S + GY PT
Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347
Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514
+ P +P ++ K + L L W F +LPDG YRR GIPSGL+ T
Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402
Query: 515 QYLDSFGNLFLIIDAMLEFGF 577
Q LDS+ N ++ + GF
Sbjct: 403 QLLDSWYNYTMLATILHALGF 423
[18][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R744_9VIRU
Length = 616
Score = 87.4 bits (215), Expect = 7e-16
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178
+P LL T+ I K+D P K+R ++ +II + M + ++ S +++G ET
Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289
Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346
G + Q+ +F +LDWS +D+R ++ I YT ++S + GY PT
Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347
Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514
+ P +P ++ K + L L W F +LPDG YRR GIPSGL+ T
Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402
Query: 515 QYLDSFGNLFLIIDAMLEFGF 577
Q LDS+ N ++ + GF
Sbjct: 403 QLLDSWYNYTMLATILHALGF 423
[19][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R742_9VIRU
Length = 616
Score = 87.4 bits (215), Expect = 7e-16
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178
+P LL T+ I K+D P K+R ++ +II + M + ++ S +++G ET
Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289
Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346
G + Q+ +F +LDWS +D+R ++ I YT ++S + GY PT
Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347
Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514
+ P +P ++ K + L L W F +LPDG YRR GIPSGL+ T
Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402
Query: 515 QYLDSFGNLFLIIDAMLEFGF 577
Q LDS+ N ++ + GF
Sbjct: 403 QLLDSWYNYTMLATILHALGF 423
[20][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R739_9VIRU
Length = 616
Score = 87.4 bits (215), Expect = 7e-16
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178
+P LL T+ I K+D P K+R ++ +II + M + ++ S +++G ET
Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289
Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346
G + Q+ +F +LDWS +D+R ++ I YT ++S + GY PT
Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347
Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514
+ P +P ++ K + L L W F +LPDG YRR GIPSGL+ T
Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402
Query: 515 QYLDSFGNLFLIIDAMLEFGF 577
Q LDS+ N ++ + GF
Sbjct: 403 QLLDSWYNYTMLATILHALGF 423
[21][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=B2M1T3_9VIRU
Length = 616
Score = 85.9 bits (211), Expect = 2e-15
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLET 178
+P LL T+ I K+D P K+R ++ +II + M + ++ S +++G ET
Sbjct: 230 FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFET 289
Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPT 346
G + Q+ +F +LDWS +D+R ++ I YT ++S + GY PT
Sbjct: 290 FTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPT 347
Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNT 514
+ P +P ++ K + L L W F +LPDG YRR GIPSGL+ T
Sbjct: 348 HAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFIT 402
Query: 515 QYLDSFGNLFLIIDAMLEFGF 577
Q DS+ N ++ + GF
Sbjct: 403 QLFDSWYNYTMLATILHALGF 423
[22][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
virus RepID=C0STM0_9VIRU
Length = 580
Score = 84.7 bits (208), Expect = 5e-15
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 6/197 (3%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETI 181
YP + T++ I P KVR ++ V + +++E M +PL R + +++G ET+
Sbjct: 199 YPINIHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETM 258
Query: 182 RGS----NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 346
G N + + SLDWS +D R L VI D+Y ++S N+GY PT
Sbjct: 259 LGGWYKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPT 318
Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLD 526
+YP D H ++ NL ++ T L DG ++RT GI SG + TQ++D
Sbjct: 319 VDYP---DSSTHP--QKLHNLWDWMLTALKFAPCALADGTIWQRTVRGIASGQFTTQFMD 373
Query: 527 SFGNLFLIIDAMLEFGF 577
S N +I+ + GF
Sbjct: 374 SIYNGLMILTILSRMGF 390
[23][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
RepID=B8YNW9_9VIRU
Length = 616
Score = 83.6 bits (205), Expect = 1e-14
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 178
+P LL T+ I K + P K+R ++ +II E ML + I+ + +++G ET
Sbjct: 230 FPMLLHTKTAIVKHNDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPGTTPMLWGYET 289
Query: 179 IRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 337
G Y I +F +LDWS +D+R ++ I Y +RS + + GY
Sbjct: 290 FTGGWFRLNHQLYCGMIKH---SFLTLDWSRFDKRAYFPLLRRILYP--VRSFLTFDEGY 344
Query: 338 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYN 511
PT+ P +P + K R++ L +L T N +LPDG YRR GIPSGL+
Sbjct: 345 VPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFI 401
Query: 512 TQYLDSFGNLFLIIDAMLEFGF 577
TQ LDS+ N ++ + GF
Sbjct: 402 TQLLDSWYNYTMLATILSALGF 423
[24][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
RepID=Q64FP0_WCCV1
Length = 616
Score = 80.9 bits (198), Expect = 7e-14
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 11/193 (5%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 178
+P LL T+ I K++ P K+R ++ +II E M + I+ + +++G ET
Sbjct: 230 FPMLLHTKTAIVKKNDPNKMRTIWGASKPWIIAETMFYWEYLAWIKHNPGATPMLWGYET 289
Query: 179 IRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 337
G + I R +F +LDWS +D+R ++ I YT +++ + GY
Sbjct: 290 FTGGWFRLNHELFCGLIQR---SFLTLDWSRFDKRAYFPLLRRILYT--VKTFLTFEEGY 344
Query: 338 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYN 511
PT+ PT+P + + R++ L +L T N +LPDG YRR GIPSGL+
Sbjct: 345 VPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFI 401
Query: 512 TQYLDSFGNLFLI 550
TQ LDS+ N ++
Sbjct: 402 TQLLDSWYNYTML 414
[25][TOP]
>UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry
disease-associated mycovirus RepID=Q65A75_9VIRU
Length = 621
Score = 79.3 bits (194), Expect = 2e-13
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 178
+P LL T+ I K+D P K+R ++ +II + ML + A+ +P +++ ET
Sbjct: 232 FPMLLHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYET 291
Query: 179 IRGS-NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 349
G R + Y ++ +LDW +D++ I D + D + + + ++GY PT
Sbjct: 292 FTGGWLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTK 350
Query: 350 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 529
+YP + R+ L + + + +LP+G+ Y R GIPSGL+ TQ +DS
Sbjct: 351 DYPDTKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGLFITQLIDS 410
Query: 530 FGNLFLIIDAMLEFGF 577
+ N ++ + GF
Sbjct: 411 WYNYTMLATILSAMGF 426
[26][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
virus II RepID=Q7TDZ9_9VIRU
Length = 610
Score = 78.2 bits (191), Expect = 4e-13
Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Frame = +2
Query: 5 YPTLLFTRNHI-SKRDGPL---KVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMY 166
Y F R HI K+ G L KVR V+ + EL+ +PL + + +++
Sbjct: 237 YWNTAFARQHIVEKKPGILAQPKVRLVFGAPFTLLTAELIFIWPLQTHLLLMQDFSPMLW 296
Query: 167 GLETIRGS-NRYIEQIARDYST---FFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHG 334
G ETI G R ++ T +LDWS +D+ + +T +R +G
Sbjct: 297 GYETILGGWYRLRGHLSGKIDTDKLVATLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNG 356
Query: 335 YQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLY 508
Y PT+ YP T D DE + R++NL +++ + L+PDG R T GI SG
Sbjct: 357 YHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDGTMIRFTHSGIYSGYM 416
Query: 509 NTQYLDSFGNLFLIIDAMLEFGF 577
TQ LDS N+ +I + GF
Sbjct: 417 QTQILDSLYNMVMIFTMVSRLGF 439
[27][TOP]
>UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot
associated partitivirus RepID=Q65A70_9VIRU
Length = 621
Score = 77.8 bits (190), Expect = 6e-13
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 178
+P LL T+ I K+D P K+R ++ +II + ML + A+ +P +++ ET
Sbjct: 232 FPMLLHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYET 291
Query: 179 IRGS-NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 349
G R + Y ++ +LDW +D++ I D + D + + + ++GY PT
Sbjct: 292 FTGGWLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTK 350
Query: 350 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 529
+YP R+ L + + + +LP+G+ Y R GIPSGL+ TQ +DS
Sbjct: 351 DYPDTKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGLFITQLIDS 410
Query: 530 FGNLFLIIDAMLEFGF 577
+ N ++ + GF
Sbjct: 411 WYNYTMLATILSAMGF 426
[28][TOP]
>UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus
1 RepID=Q52UL1_9VIRU
Length = 573
Score = 76.3 bits (186), Expect = 2e-12
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
Frame = +2
Query: 53 PLKVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIAR 217
P K+R V+ V I E M +PL + +++ ET+ G N Q +
Sbjct: 196 PPKIRTVFGVPKSLIFAEAMFFWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQ 255
Query: 218 DYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 397
+ T F+LDWS +D R+ + D D ++S Y PT YPT + R
Sbjct: 256 SFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTYPTCRTNPQ-----R 309
Query: 398 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577
+ NL +++ T Y + G YRR G+PSG++ TQ+ DSF N +++ + GF
Sbjct: 310 LQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALGF 369
[29][TOP]
>UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA
mycovirus RepID=Q8B0U3_9VIRU
Length = 598
Score = 75.5 bits (184), Expect = 3e-12
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Frame = +2
Query: 59 KVRPVYAVDDIFIIIELMLTFPLTI--QARKPSCCIMYGLETIRGS--NRYIEQIARD-- 220
K+R V+ V ++ M +PL + + +++G ETI G N Y+E I
Sbjct: 224 KIRVVFGVSKRHVLPSAMFFWPLFFFYLKNRETSPLLWGNETILGGGLNLYMECIIPRLY 283
Query: 221 YSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 397
+STF +DWSS+D R L +I + ++ R+ +GY PT +Y H
Sbjct: 284 FSTFVMVDWSSFDLRSLFSIIRQDIFPNW-RTYFDFENGYIPTNKYRESKADPAH----- 337
Query: 398 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577
++ L +++ M LPDG Y+R GIPSGL+ TQ+LDSF N+ +I+ + GF
Sbjct: 338 LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSGLFTTQFLDSFYNMIMILTILGRMGF 397
[30][TOP]
>UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum
partitivirus S RepID=C7ENF4_9VIRU
Length = 580
Score = 74.3 bits (181), Expect = 6e-12
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 7/193 (3%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCC---IMYGLE 175
Y T L R H+ + K+R V+ V + ++ E M +PL +++G E
Sbjct: 191 YHTTLHARAHVVGHEDADKIRAVFGVPKLLLMAENMFIWPLQAYYLNQDTTKHHLLWGNE 250
Query: 176 TIRGSNRYIE---QIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQP 343
++G + + Q R T SLDWS +D+R L VI D++ +S H Y+P
Sbjct: 251 IMKGGWKKLWGQLQNGRISRTILSLDWSEFDKRALHEVIDDVH--SMWKSWFDFTH-YEP 307
Query: 344 TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYL 523
T Y + H+ R++NL ++ + L PDG Y+ T GI SG TQ L
Sbjct: 308 TIFYEKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGFQQTQLL 364
Query: 524 DSFGNLFLIIDAM 562
DSF N+ +++ +
Sbjct: 365 DSFVNMIMLLTVL 377
[31][TOP]
>UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004
RepID=Q5XM56_9VIRU
Length = 573
Score = 73.9 bits (180), Expect = 8e-12
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
Frame = +2
Query: 53 PLKVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIAR 217
P K+R V+ V I E M ++PL + +++ ET+ G N Q +
Sbjct: 196 PPKIRTVFGVPKSLIFAEAMFSWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQ 255
Query: 218 DYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 397
+ T F+LDWS +D R+ + D D ++S Y PT PT + R
Sbjct: 256 SFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTNPTCRTNPQ-----R 309
Query: 398 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 577
+ NL +++ T Y + G YRR G+PSG++ TQ+ DSF N +++ + GF
Sbjct: 310 LQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALGF 369
[32][TOP]
>UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum
cryptic virus 1 RepID=B7ZGY8_9VIRU
Length = 587
Score = 72.0 bits (175), Expect = 3e-11
Identities = 64/198 (32%), Positives = 89/198 (44%), Gaps = 13/198 (6%)
Frame = +2
Query: 8 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT----IQARKPSCCIMYGLE 175
P R+ I P KVR VY + I + M +PL I + P +++G E
Sbjct: 205 PMRSHARSAIQPISDPNKVRFVYGYPKVGIFPQAMFFWPLFVYYHITGQSP---LLWGYE 261
Query: 176 TIRGS----NRYIEQIARDYSTFFSLDWSSYD-QRLPRVITDIYYTDFLRSLIVINHGYQ 340
T+ G N + + LDW +D L V DI + S +HGYQ
Sbjct: 262 TMTGGWYRLNHELRSTPGISGSILELDWQGFDIHALFEVFDDIKNLSW--SFFDCSHGYQ 319
Query: 341 PTYEYP-TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQ 517
PT +Y T D D R+ NL ++ LPDG +RR+ G+PSGL+ TQ
Sbjct: 320 PTKDYQGTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPSGLFITQ 373
Query: 518 YLDSFGN---LFLIIDAM 562
+LDS N +F I+DAM
Sbjct: 374 WLDSVYNCIMIFTILDAM 391
[33][TOP]
>UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1
Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU
Length = 367
Score = 71.2 bits (173), Expect = 5e-11
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 178
+P LL + + K D P K+R ++ V ++II E + + I+ +++G ET
Sbjct: 1 FPMLLHIKTAVVKFDAPNKLRTIWGVSKLWIISEAQIYWEYIAWIKLNPGITPMLWGYET 60
Query: 179 IRGSNRYIEQIAR---DYSTFFSLDWSSYDQRLPR-VITDIYYTDFLRSLIVINHGYQPT 346
G + + + T+ ++DWS +D+R +I I+ R +GY PT
Sbjct: 61 FTGGWFRLYRTLHTPGENVTYITIDWSRFDKRAYFWLIRKIFIRT--RQFFDFENGYTPT 118
Query: 347 YEYP---TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQ 517
+YP T+PD ++ L + + + +LP+G+ Y+R GIPSGL+ TQ
Sbjct: 119 KDYPFSPTHPD--------KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPSGLFITQ 170
Query: 518 YLDSFGNLFLI 550
+DS+ N ++
Sbjct: 171 LMDSWYNYVML 181
[34][TOP]
>UniRef100_Q6BE42 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-2 RepID=Q6BE42_9VIRU
Length = 538
Score = 70.1 bits (170), Expect = 1e-10
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 19/192 (9%)
Frame = +2
Query: 59 KVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGSNRYI--EQIARD--Y 223
KVR V+ V I E M +PL +I + +++ E++ G + E AR Y
Sbjct: 154 KVRTVFGVPKYLIFAEAMFFWPLFSIYFTSANTPLLWNYESLNGGWHRLDSEYHARYTMY 213
Query: 224 STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEY-PTYPDLDE------H 382
S F+LDWS +D R +Y+T + + ++ + Y PT P LDE H
Sbjct: 214 SPIFNLDWSEFDMR-------VYFTVWSDIIDRVSTYFCFCGRYCPTLPVLDEETGTQLH 266
Query: 383 KLY-------HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNL 541
Y R+ NL ++ Y NM + G ++R+ G+PSG++ TQ+ DSF N
Sbjct: 267 PPYSEPFTNPQRLRNLWFWIRYAYFNMAAVTTTGKIFKRSFAGMPSGIFCTQFYDSFYNA 326
Query: 542 FLIIDAMLEFGF 577
+I+ +L G+
Sbjct: 327 VIIVTCLLALGY 338
[35][TOP]
>UniRef100_C1KDH6 Putative RNA-dependent RNA polymerase n=1 Tax=Heterobasidion
insulare T-type partitivirus RepID=C1KDH6_9VIRU
Length = 585
Score = 69.3 bits (168), Expect = 2e-10
Identities = 60/184 (32%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Frame = +2
Query: 59 KVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGSNRYIEQ---IARDYS 226
K+R +Y V I+ + M +PL + + +++G ET G I + R YS
Sbjct: 223 KIRVIYGVSKRHILAQAMFFWPLFRYYIEEHTSPLLWGNETFTGGMLKIHNLISVPRLYS 282
Query: 227 -TFFSLDWSSYDQR----LPRVITDIY--YTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 385
T+ ++DWS +D R + R I D + Y DF Y PT TYPD
Sbjct: 283 QTYLTVDWSGFDLRSLFTIQREIFDDWRTYFDFT--------AYIPTR---TYPDSKTDP 331
Query: 386 LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAML 565
+ RM+ L ++ M F+LPD Y R IPSGL+ TQ+LDS NL +I +
Sbjct: 332 I--RMERLWNWQRDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYNLIMIYTILS 389
Query: 566 EFGF 577
GF
Sbjct: 390 AMGF 393
[36][TOP]
>UniRef100_B7X9J3 Putative RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes
isometric virus RepID=B7X9J3_9VIRU
Length = 587
Score = 69.3 bits (168), Expect = 2e-10
Identities = 61/196 (31%), Positives = 90/196 (45%), Gaps = 6/196 (3%)
Frame = +2
Query: 5 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPS--CCIMYGLET 178
Y T L +R H+ K D P K+R V+ V + + E +P+ S +++G E
Sbjct: 197 YWTNLRSRFHVVKADEPDKIRAVFGVPKLLLQAEQTFIWPMLSHYLDNSDRYPLLWGNEM 256
Query: 179 IRGSNRYIEQI---ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 346
+ G R + + R +T SLDWS +D+R L VI D++ D RS + Y PT
Sbjct: 257 MSGGWRKLNRTIYNGRTVNTVLSLDWSQFDKRALHEVIDDVH--DIWRSYFDFSF-YMPT 313
Query: 347 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLD 526
YP P DE R++NL ++ L G + GI SG TQ LD
Sbjct: 314 SFYPNAP-TDE----SRLENLWEWMTYNIKKYPIRLSSGKLSQWRFNGIASGFQQTQLLD 368
Query: 527 SFGNLFLIIDAMLEFG 574
SF N+ +I+ + G
Sbjct: 369 SFVNMIMILTCLSRAG 384
[37][TOP]
>UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus
partitivirus RepID=A2VA07_9VIRU
Length = 132
Score = 56.2 bits (134), Expect = 2e-06
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Frame = +2
Query: 11 TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETI 181
T L +R+H+ + D P K+R V+ V + +++E M + + + +++G ETI
Sbjct: 8 TYLHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETI 67
Query: 182 RGS-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 346
RG + I Q+ ++ S+ S DWS +D + L VI D++ D +S N GY+P+
Sbjct: 68 RGGWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123