BB912672 ( RCE11970 )

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>UniRef100_Q99367 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
           RepID=Q99367_SOYBN
          Length = 494

 Score =  177 bits (450), Expect = 4e-43
 Identities = 84/92 (91%), Positives = 88/92 (95%)
 Frame = -2

Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           R SPSSPYSPTSP+YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG SPDYSPSSPQFSPS
Sbjct: 404 RLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 463

Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
           TGYSPSQPGYSPSSTSQYTP+T+D KDD GT+
Sbjct: 464 TGYSPSQPGYSPSSTSQYTPQTSD-KDDGGTR 494

 Score =  118 bits (295), Expect = 4e-25
 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 301 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 360

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S GYSP+ P YSP+S S Y+P
Sbjct: 361 SPGYSPTSPSYSPTSPS-YSP 380

 Score =  117 bits (293), Expect = 6e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 294 YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 353

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ PGYSP+S S Y+P
Sbjct: 354 SPAYSPTSPGYSPTSPS-YSP 373

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 252 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 311

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 312 SPAYSPTSPSYSPTSPS-YSP 331

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 273 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 332

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 333 SPSYSPTSPSYSPTSPS-YSP 352

 Score =  116 bits (291), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 266 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPT 325

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 326 SPSYSPTSPSYSPTSPS-YSP 345

 Score =  116 bits (290), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 259 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPT 318

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 319 SPSYSPTSPSYSPTSPS-YSP 338

 Score =  115 bits (288), Expect = 2e-24
 Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP  S TSP YSP+SP +SP 
Sbjct: 217 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 276

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 277 SPSYSPTSPSYSPTSPS-YSP 296

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 315 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 374

Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
           S  YSP+ P Y+P S ++Y+P    +   P
Sbjct: 375 SPSYSPTSPSYNPQS-AKYSPSLAYSPSSP 403

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 245 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 304

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 305 SPAYSPTSPAYSPTSPS-YSP 324

 Score =  111 bits (278), Expect = 4e-23
 Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP  S TSP Y+P S ++SPS
Sbjct: 336 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 395

Query: 401 TGYSPSQPGYSPSSTSQYTP 342
             YSPS P  SPS  S Y+P
Sbjct: 396 LAYSPSSPRLSPS--SPYSP 413

 Score =  110 bits (276), Expect = 6e-23
 Identities = 53/81 (65%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 238 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 297

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + Y+P
Sbjct: 298 SPSYSPTSPAYSPTSPA-YSP 317

 Score =  105 bits (263), Expect = 2e-21
 Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
 Frame = -2

Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           FSP+S   YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP  S TSP YSPSSP +SP
Sbjct: 202 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 261

Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 262 TSPAYSPTSPSYSPTSPS-YSP 282

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 12/90 (13%)
 Frame = -2

Query: 575 SPSSPYSPTSPS----------YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
           SP+   SPTS +          +SPTS P YSP+SP YSPSSP YSP+SP  S TSP YS
Sbjct: 180 SPNLRLSPTSDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYS 239

Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           P+SP +SP S  YSPS PGYSP+S + Y+P
Sbjct: 240 PTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 268

[2][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
            binding / DNA-directed RNA polymerase n=1 Tax=Vitis
            vinifera RepID=UPI0001985649
          Length = 1848

 Score =  162 bits (411), Expect = 1e-38
 Identities = 76/92 (82%), Positives = 83/92 (90%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            R SPSSPYSPTSP+YSPTSPSYSPTSPSYSP+SPTYSP+SPYNSG SPDYSPSSPQ+SPS
Sbjct: 1758 RLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPS 1817

Query: 401  TGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
             GYSPS PGYSPSSTSQYTP+ + NKD+   Q
Sbjct: 1818 AGYSPSAPGYSPSSTSQYTPQMS-NKDNGSPQ 1848

 Score =  118 bits (295), Expect = 4e-25
 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1655 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1714

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S GYSP+ P YSP+S S Y+P
Sbjct: 1715 SPGYSPTSPSYSPTSPS-YSP 1734

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPT 1665

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1666 SPAYSPTSPSYSPTSPS-YSP 1685

 Score =  117 bits (293), Expect = 6e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1648 YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1707

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ PGYSP+S S Y+P
Sbjct: 1708 SPAYSPTSPGYSPTSPS-YSP 1727

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/90 (64%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1728

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P Y+PSS ++Y+P    +   P
Sbjct: 1729 SPSYSPTSPSYNPSS-AKYSPSLAYSPSSP 1757

 Score =  115 bits (288), Expect = 2e-24
 Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP  S TSP YSP+SP +SP 
Sbjct: 1550 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 1609

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1610 SPSYSPTSPSYSPTSPS-YSP 1629

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1651

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1652 SPSYSPTSPAYSPTSPA-YSP 1671

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1585 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1645 SPVYSPTSPSYSPTSPA-YSP 1664

 Score =  114 bits (286), Expect = 4e-24
 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1686

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1687 SPSYSPTSPSYSPTSPS-YSP 1706

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP  S TSP Y+PSS ++SPS
Sbjct: 1690 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPS 1749

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSPS P  SPS  S Y+P
Sbjct: 1750 LAYSPSSPRLSPS--SPYSP 1767

 Score =  112 bits (279), Expect = 3e-23
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1578 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1638 SPSYSPTSPVYSPTSPS-YSP 1657

 Score =  109 bits (273), Expect = 1e-22
 Identities = 51/75 (68%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1571 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630

Query: 404  STGYSPSQPGYSPSS 360
            S  YSP+ P YSP+S
Sbjct: 1631 SPSYSPTSPSYSPTS 1645

 Score =  105 bits (263), Expect = 2e-21
 Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            FSP+S   YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP  S TSP YSPSSP +SP
Sbjct: 1535 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 1594

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1595 TSPAYSPTSPSYSPTSPS-YSP 1615

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
 Frame = -2

Query: 542  SYSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369
            ++SPTS P YSP+SP YSPSSP YSP+SP  S TSP YSP+SP +SP S  YSPS PGYS
Sbjct: 1534 AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 1593

Query: 368  PSSTSQYTP 342
            P+S + Y+P
Sbjct: 1594 PTSPA-YSP 1601

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
 Frame = -2

Query: 575  SPSSPYSP-TSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQ 414
            SP+   SP T   +SP     ++SPTS      SP YSPSSP   G   +SP YSP+SP 
Sbjct: 1513 SPNLRLSPITDAQFSPYVGGMAFSPTS------SPGYSPSSP---GYSPSSPGYSPTSPG 1563

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTPKT 336
            +SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPT-YSPSS 1589

[3][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
            RepID=B9SXC0_RICCO
          Length = 1855

 Score =  162 bits (409), Expect = 2e-38
 Identities = 77/96 (80%), Positives = 82/96 (85%), Gaps = 1/96 (1%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            R SPSSPYSPTSP+YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG  PDYSPSSPQ+SPS
Sbjct: 1751 RLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVGPDYSPSSPQYSPS 1810

Query: 401  TGYSPSQPGYSPSSTSQYT-PKTNDNKDDPGTQ*AR 297
             GYSPS PGYSPSSTSQYT   T D++ D G +  R
Sbjct: 1811 AGYSPSAPGYSPSSTSQYTQTSTKDDRTDKGDRNGR 1846

 Score =  118 bits (295), Expect = 4e-25
 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1648 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1707

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S GYSP+ P YSP+S S Y+P
Sbjct: 1708 SPGYSPTSPSYSPTSPS-YSP 1727

 Score =  117 bits (293), Expect = 6e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1641 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ PGYSP+S S Y+P
Sbjct: 1701 SPAYSPTSPGYSPTSPS-YSP 1720

 Score =  116 bits (291), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1651

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1652 SPAYSPTSPAYSPTSPS-YSP 1671

 Score =  116 bits (290), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPT 1672

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1673 SPSYSPTSPSYSPTSPS-YSP 1692

 Score =  115 bits (288), Expect = 2e-24
 Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP  S TSP YSP+SP +SP 
Sbjct: 1550 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 1609

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1610 SPSYSPTSPSYSPTSPS-YSP 1629

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1721

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P Y+P S ++Y+P    +   P
Sbjct: 1722 SPSYSPTSPSYNPQS-AKYSPSLAYSPSSP 1750

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1585 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1645 SPVYSPTSPAYSPTSPA-YSP 1664

 Score =  114 bits (286), Expect = 4e-24
 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1679

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1680 SPSYSPTSPSYSPTSPS-YSP 1699

 Score =  111 bits (278), Expect = 4e-23
 Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP  S TSP Y+P S ++SPS
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 1742

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSPS P  SPS  S Y+P
Sbjct: 1743 LAYSPSSPRLSPS--SPYSP 1760

 Score =  110 bits (276), Expect = 6e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1578 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1638 SPSYSPTSPVYSPTSPA-YSP 1657

 Score =  109 bits (273), Expect = 1e-22
 Identities = 51/75 (68%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1571 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630

Query: 404  STGYSPSQPGYSPSS 360
            S  YSP+ P YSP+S
Sbjct: 1631 SPSYSPTSPSYSPTS 1645

 Score =  107 bits (267), Expect = 7e-22
 Identities = 64/117 (54%), Positives = 72/117 (61%), Gaps = 28/117 (23%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSY-------------SPSSPTYSPSSPYNSGTS 441
            +SP+SP YSPTSPSYSPTSPSYSPTSPSY             SPSSP  SPSSPY S TS
Sbjct: 1704 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPY-SPTS 1762

Query: 440  PDYSPSSPQFSP-STGYSPSQPGYSPS-------------STSQYTPKTNDNKDDPG 312
            P+YSP+SP +SP S  YSPS P YSPS             S+ QY+P    +   PG
Sbjct: 1763 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVGPDYSPSSPQYSPSAGYSPSAPG 1819

 Score =  104 bits (260), Expect = 4e-21
 Identities = 55/82 (67%), Positives = 64/82 (78%), Gaps = 3/82 (3%)
 Frame = -2

Query: 578  FSPS-SP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            FSP+ SP YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP  S TSP YSPSSP +SP
Sbjct: 1535 FSPTLSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 1594

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1595 TSPAYSPTSPSYSPTSPS-YSP 1615

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 52/87 (59%), Positives = 61/87 (70%), Gaps = 7/87 (8%)
 Frame = -2

Query: 581  RFSPS-----SPYSPTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
            R SP+     SPY    P +SPT SP YSP+SP YSPSSP YSP+SP  S TSP YSP+S
Sbjct: 1517 RLSPTTDAQFSPYVSGMP-FSPTLSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTS 1575

Query: 419  PQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P +SP S  YSPS PGYSP+S + Y+P
Sbjct: 1576 PGYSPTSPTYSPSSPGYSPTSPA-YSP 1601

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
 Frame = -2

Query: 575  SPSSPYSPTSPS-YSP--TSPSYSPT-SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            SPS   SPT+ + +SP  +   +SPT SP YSPSSP YSPSSP        YSP+SP +S
Sbjct: 1513 SPSLRLSPTTDAQFSPYVSGMPFSPTLSPGYSPSSPGYSPSSP-------GYSPTSPGYS 1565

Query: 407  P-STGYSPSQPGYSPSSTSQYTPKT 336
            P S GYSP+ PGYSP+S + Y+P +
Sbjct: 1566 PTSPGYSPTSPGYSPTSPT-YSPSS 1589

[4][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
            RepID=Q99368_SOYBN
          Length = 977

 Score =  157 bits (396), Expect = 7e-37
 Identities = 74/87 (85%), Positives = 80/87 (91%), Gaps = 1/87 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SPSSP  SPTSP+YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG SPDYSP+SPQFSPS
Sbjct: 891  YSPSSPRLSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPTSPQFSPS 950

Query: 401  TGYSPSQPGYSPSSTSQYTPKTNDNKD 321
             GYSPSQPGYSPSSTSQ TP+T+D  +
Sbjct: 951  AGYSPSQPGYSPSSTSQDTPQTSDKDE 977

 Score =  110 bits (276), Expect = 6e-23
 Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SPSSP YSPTSP YSPTSP YSPTSP+YSPSSP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 738 YSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPT 797

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YS + P YSP+S S Y+P
Sbjct: 798 SPAYSSTSPAYSPTSPS-YSP 817

 Score =  110 bits (276), Expect = 6e-23
 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YS TSP+YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 787  YSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPT 846

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 847  SPSYSPTSPAYSPTSPS-YSP 866

 Score =  109 bits (273), Expect = 1e-22
 Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SPSSP YSP+SP YSPTSP YSPTSP YSP+SPTYSPSSP  S TSP YSP+SP +SP 
Sbjct: 731 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 790

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YS S++  Y+P
Sbjct: 791 SPAYSPTSPAYS-STSPAYSP 810

 Score =  109 bits (273), Expect = 1e-22
 Identities = 56/90 (62%), Positives = 68/90 (75%), Gaps = 9/90 (10%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP        YSPTSPSYSPTSP+YSPTSPSYS +SP+YSP+SP  S TSP YSP+
Sbjct: 794  YSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPT 853

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
            SP +SP S  YSP+ P YSP+S S Y P++
Sbjct: 854  SPAYSPTSPSYSPTSPSYSPTSPS-YNPQS 882

 Score =  108 bits (271), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 759 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPT 818

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YS +S S Y+P
Sbjct: 819 SPAYSPTSPSYSLTSPS-YSP 838

 Score =  105 bits (263), Expect = 2e-21
 Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYS TSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 815  YSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 874

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  Y+P    YSPS    Y+P +
Sbjct: 875  SPSYNPQSAKYSPSLA--YSPSS 895

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/76 (65%), Positives = 59/76 (77%), Gaps = 3/76 (3%)
 Frame = -2

Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           FSPSS   YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP  S +SP YSP+SP +SP
Sbjct: 723 FSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 782

Query: 404 -STGYSPSQPGYSPSS 360
            S  YSP+ P YSP+S
Sbjct: 783 TSPSYSPTSPAYSPTS 798

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 56/88 (63%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSP+YSPTSPSYSPTSP+YSP+SP YS +SP  S TSP YSP+SP +SP 
Sbjct: 766  YSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPT 825

Query: 404  STGYS---PSQP----GYSPSSTSQYTP 342
            S  YS   PS       YSP+S S Y+P
Sbjct: 826  SPSYSLTSPSYSPTSPSYSPTSPS-YSP 852

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 6/86 (6%)
 Frame = -2

Query: 581 RFSPSSP--YSPT--SPSYSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
           R SPSS   +SP     ++SP+S P YSP+SP YSPSSP YSP+SP  S TSP YSP+SP
Sbjct: 705 RLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 764

Query: 416 QFSPST-GYSPSQPGYSPSSTSQYTP 342
            +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 765 TYSPSSPGYSPTSPAYSPTSPS-YSP 789

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPT--SPSYSPSS-PTYSPSSPYNSGTSPDYSPSSPQFSP 405
           SPS   SP       +   +SP     ++SPSS P YSPSSP  S +SP YSP+SP +SP
Sbjct: 695 SPSYLLSPNLRLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSP 754

Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
            S GYSP+ P YSPSS   Y+P
Sbjct: 755 TSPGYSPTSPTYSPSSPG-YSP 775

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
 Frame = -2

Query: 527 SPSY--SPT---SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSP 366
           SPSY  SP    SPS       Y     ++  +SP YSPSSP +SPS+ GYSP+ PGYSP
Sbjct: 695 SPSYLLSPNLRLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSP 754

Query: 365 SSTSQYTPKTNDNKDDPG 312
           +S          +   PG
Sbjct: 755 TSPGYSPTSPTYSPSSPG 772

[5][TOP]
>UniRef100_Q56Z04 DNA-directed RNA polymerase II largest chain (Fragment) n=1
           Tax=Arabidopsis thaliana RepID=Q56Z04_ARATH
          Length = 99

 Score =  143 bits (360), Expect = 1e-32
 Identities = 68/90 (75%), Positives = 73/90 (81%)
 Frame = -2

Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           R SP+SPYSPTSP+YSPTSPSYSPTSPSYSPSSPTYSPSSPY+SG SPDYSPS+      
Sbjct: 5   RLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA------ 58

Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            GYSP+ PGYSPSST QYTP   D KD  G
Sbjct: 59  -GYSPTLPGYSPSSTGQYTPHEGDKKDKTG 87

[6][TOP]
>UniRef100_A7NVN8 Chromosome chr18 scaffold_1, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7NVN8_VITVI
          Length = 89

 Score =  136 bits (342), Expect = 1e-30
 Identities = 65/82 (79%), Positives = 72/82 (87%)
 Frame = -2

Query: 551 TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGY 372
           +S S SPTSPSYSPTSPSYSP+SPTYSP+SPYNSG SPDYSPSSPQ+SPS GYSPS PGY
Sbjct: 9   SSYSCSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGY 68

Query: 371 SPSSTSQYTPKTNDNKDDPGTQ 306
           SPSSTSQYTP+ + NKD+   Q
Sbjct: 69  SPSSTSQYTPQMS-NKDNGSPQ 89

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = -2

Query: 578 FSPSSPY-SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +SP+SPY S  SP YSP+SP YSP S  YSPS+P YSPSS          S  +PQ S  
Sbjct: 34  YSPTSPYNSGVSPDYSPSSPQYSP-SAGYSPSAPGYSPSST---------SQYTPQMSNK 83

Query: 401 TGYSP 387
              SP
Sbjct: 84  DNGSP 88

[7][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
            RepID=Q6FQS9_CANGA
          Length = 1715

 Score =  123 bits (309), Expect = 9e-27
 Identities = 61/89 (68%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1686

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            S  YSP+ P YSP S + Y+PK  D K D
Sbjct: 1687 SPSYSPTSPSYSPGSPT-YSPKDEDEKKD 1714

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1543 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1602

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1603 SPSYSPTSPSYSPTSPS-YSP 1622

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1564 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1623

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1624 SPSYSPTSPSYSPTSPS-YSP 1643

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1585 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1645 SPSYSPTSPSYSPTSPS-YSP 1664

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1665

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1666 SPSYSPTSPSYSPTSPS-YSP 1685

 Score =  110 bits (275), Expect = 8e-23
 Identities = 55/78 (70%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
 Frame = -2

Query: 569  SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
            SSP +SPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  
Sbjct: 1539 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598

Query: 395  YSPSQPGYSPSSTSQYTP 342
            YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSPTSPS-YSP 1615

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
 Frame = -2

Query: 575  SPSSPY--SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +P+SP     +SP +SPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +S  
Sbjct: 1529 APASPGFGGVSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-- 1586

Query: 401  TGYSPSQP----GYSPSSTSQYTP 342
                         YSP+S S Y+P
Sbjct: 1587 --------PTSPSYSPTSPS-YSP 1601

[8][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
            discoideum RepID=RPB1_DICDI
          Length = 1727

 Score =  122 bits (307), Expect = 2e-26
 Identities = 62/90 (68%), Positives = 73/90 (81%), Gaps = 5/90 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSPSSP +SPS
Sbjct: 1637 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPS 1696

Query: 401  T-GYSPSQPGYSPSS---TSQYTPKTNDNK 324
            +  YSPS P YSPSS   T++Y  + N+ K
Sbjct: 1697 SPSYSPSSPSYSPSSPTFTNKYNYQPNNKK 1726

 Score =  120 bits (302), Expect = 6e-26
 Identities = 60/83 (72%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1630 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1689

Query: 401  T-GYSPSQPGYSPSSTSQYTPKT 336
            +  YSPS P YSPSS S Y+P +
Sbjct: 1690 SPSYSPSSPSYSPSSPS-YSPSS 1711

 Score =  120 bits (300), Expect = 1e-25
 Identities = 60/83 (72%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1623 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1682

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P YSPSS S Y+P +
Sbjct: 1683 SPSYSPSSPSYSPSSPS-YSPSS 1704

 Score =  119 bits (298), Expect = 2e-25
 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP+ S TSP YSP+SP +SP 
Sbjct: 1560 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPT 1619

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1620 SPSYSPTSPSYSPTSPS-YSP 1639

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1602 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1661

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1662 SPSYSPTSPSYSPTSPS-YSP 1681

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1581 YSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1640

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1641 SPSYSPTSPSYSPTSPS-YSP 1660

 Score =  114 bits (284), Expect = 7e-24
 Identities = 57/82 (69%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++ P SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP
Sbjct: 1545 QYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSP 1604

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1605 TSPSYSPTSPSYSPTSPS-YSP 1625

 Score =  106 bits (264), Expect = 1e-21
 Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +  S  Y P SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1540 YGSSYQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1599

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1600 PFYSPTSPSYSPTSPS-YSP 1618

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 50/129 (38%), Positives = 60/129 (46%), Gaps = 52/129 (40%)
 Frame = -2

Query: 572  PSSPYSPTSPSYS----PTSPS-------------------------------------- 519
            P +P S T PSYS     T+P                                       
Sbjct: 1485 PDTPGSQT-PSYSYGDGSTTPFHNPYDAPLSPFNETFRGDFSPSAMNSPGYNANKSYGSS 1543

Query: 518  ---------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369
                     YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  YSP+ P YS
Sbjct: 1544 YQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYS 1603

Query: 368  PSSTSQYTP 342
            P+S S Y+P
Sbjct: 1604 PTSPS-YSP 1611

[9][TOP]
>UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium
            gossypii RepID=RPB1_ASHGO
          Length = 1745

 Score =  122 bits (307), Expect = 2e-26
 Identities = 64/96 (66%), Positives = 75/96 (78%), Gaps = 6/96 (6%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDN----KDDPGT 309
            S  YSP+ P YSP S S Y+P  N+N    KD+ GT
Sbjct: 1710 SPSYSPTSPQYSPRSPS-YSPSFNNNDKEQKDENGT 1744

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1545 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1605 SPSYSPTSPSYSPTSPS-YSP 1624

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1647 SPSYSPTSPSYSPTSPS-YSP 1666

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  110 bits (275), Expect = 8e-23
 Identities = 55/78 (70%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
 Frame = -2

Query: 569  SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
            SSP +SPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  
Sbjct: 1541 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1600

Query: 395  YSPSQPGYSPSSTSQYTP 342
            YSP+ P YSP+S S Y+P
Sbjct: 1601 YSPTSPSYSPTSPS-YSP 1617

[10][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
            RepID=C5YGY9_SORBI
          Length = 1857

 Score =  121 bits (304), Expect = 3e-26
 Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 6/90 (6%)
 Frame = -2

Query: 578  FSPSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS--GTSPDYSPSSP 417
            +SPSSP    YS TSPSYSPTSP+YSPTSPSYS  SP+YSP+SP+N+  G SPDYSP+SP
Sbjct: 1766 YSPSSPRMTPYSQTSPSYSPTSPTYSPTSPSYSQPSPSYSPTSPFNTSGGPSPDYSPTSP 1825

Query: 416  QFSPSTGYSPSQPGYSPSSTSQYTPKTNDN 327
             +SPS  YSP+ PGYSPSST Q   K +++
Sbjct: 1826 NYSPSGSYSPTAPGYSPSSTGQGNDKDDES 1855

 Score =  119 bits (299), Expect = 1e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1662 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1721

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ PGYSP+S S Y+P
Sbjct: 1722 SPAYSPTSPGYSPTSPS-YSP 1741

 Score =  116 bits (291), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1599 YSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1658

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1659 SPAYSPTSPAYSPTSPS-YSP 1678

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1742

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P Y+PSS ++Y+P
Sbjct: 1743 SPSYSPTSPSYNPSS-AKYSP 1762

 Score =  116 bits (290), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPT 1679

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1680 SPSYSPTSPSYSPTSPS-YSP 1699

 Score =  114 bits (284), Expect = 7e-24
 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1592 YSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1652 SPVYSPTSPAYSPTSPA-YSP 1671

 Score =  114 bits (284), Expect = 7e-24
 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1648 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1707

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1708 SPSYSPTSPSYSPTSPA-YSP 1727

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1641 YSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1701 SPSYSPTSPSYSPTSPS-YSP 1720

 Score =  112 bits (279), Expect = 3e-23
 Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            F+P   YSP SPSYSP SPSYSPTSPSY+P SPTYSP+SP  S TSP YSP+SP +SP S
Sbjct: 1558 FTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTS 1617

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1618 PSYSPTSPSYSPTSPS-YSP 1636

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1585 YTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1645 SPSYSPTSPVYSPTSPA-YSP 1664

 Score =  109 bits (273), Expect = 1e-22
 Identities = 53/82 (64%), Positives = 65/82 (79%), Gaps = 3/82 (3%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP  S TSP Y+PSS ++SPS
Sbjct: 1704 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPS 1763

Query: 401  TGYSPSQPGYSPSS--TSQYTP 342
              YSPS P  +P S  +  Y+P
Sbjct: 1764 HAYSPSSPRMTPYSQTSPSYSP 1785

 Score =  107 bits (268), Expect = 5e-22
 Identities = 50/75 (66%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP Y+P SP+YSPTSP+YSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1578 YSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637

Query: 404  STGYSPSQPGYSPSS 360
            S  YSP+ P YSP+S
Sbjct: 1638 SPSYSPTSPSYSPTS 1652

 Score =  107 bits (267), Expect = 7e-22
 Identities = 54/75 (72%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP  S TSP YSP+SP ++PS
Sbjct: 1697 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPS 1756

Query: 401  TG-YSPSQPGYSPSS 360
            +  YSPS   YSPSS
Sbjct: 1757 SAKYSPSH-AYSPSS 1770

 Score =  104 bits (260), Expect = 4e-21
 Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 9/90 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1728

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
            SP +SP S  YSP+ P YSP+S S Y P +
Sbjct: 1729 SPGYSPTSPSYSPTSPSYSPTSPS-YNPSS 1757

 Score =  100 bits (249), Expect = 8e-20
 Identities = 49/80 (61%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +SPSSP       YSP SPSYSP SPSYSP+SP+Y+P SP  S TSP+YSP+SP +SP S
Sbjct: 1551 YSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTS 1610

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1611 PSYSPTSPSYSPTSPS-YSP 1629

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 51/89 (57%), Positives = 62/89 (69%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSP-SSP--YSPTSPSYSPTSP------SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
            FSP  SP  YSP+S  YSP+SP       YSP SPSYSP+SP+YSP+SP  +  SP YSP
Sbjct: 1535 FSPFPSPGGYSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSP 1594

Query: 425  SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1595 TSPNYSPTSPTYSPTSPSYSPTSPS-YSP 1622

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 36/79 (45%), Positives = 45/79 (56%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            FSP   +   SP  SP    YSP+S  YSPSSP ++P   Y S  SP YSP+SP      
Sbjct: 1526 FSPYVGHMAFSPFPSPGG--YSPSSGGYSPSSPVFTPEKGY-SPLSPSYSPASPS----- 1577

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P Y+P S + Y+P
Sbjct: 1578 -YSPTSPSYTPGSPT-YSP 1594

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGTSPDYSPSS 420
            R SP +  +  SP     + S  P+   YSPSS  YSPSSP        S  SP YSP+S
Sbjct: 1516 RASPINTDASFSPYVGHMAFSPFPSPGGYSPSSGGYSPSSPVFTPEKGYSPLSPSYSPAS 1575

Query: 419  PQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P +SP S  Y+P  P YSP+S + Y+P
Sbjct: 1576 PSYSPTSPSYTPGSPTYSPTSPN-YSP 1601

[11][TOP]
>UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
            RepID=B0XAQ9_CULQU
          Length = 1874

 Score =  121 bits (304), Expect = 3e-26
 Identities = 57/80 (71%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP+SPYSPTSPSYSPTSP+YSPTSPSYSPSSP+YSP+SP  S TSP YSP+SP ++P+T
Sbjct: 1648 YSPTSPYSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPAT 1707

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSPSS   Y+P
Sbjct: 1708 PSYSPTSPNYSPSS-PHYSP 1726

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/83 (66%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSPSYSP+SPSYSP+SP+YSP+SP  S TSP+Y+P++P +SP 
Sbjct: 1654 YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPT 1713

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P YSP+S S Y+P +
Sbjct: 1714 SPNYSPSSPHYSPTSPS-YSPSS 1735

 Score =  113 bits (282), Expect = 1e-23
 Identities = 57/97 (58%), Positives = 67/97 (69%), Gaps = 18/97 (18%)
 Frame = -2

Query: 578  FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438
            +SPSSP             YSPTSPSYSPTSP+YSPTSP YSP+SP YSP+SP  S TSP
Sbjct: 1560 YSPSSPNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPNYSPTSPNYSPTSP 1619

Query: 437  DYSPSSPQFSPSTGYSPSQPGYSPSS-----TSQYTP 342
             YSP+SP +SP+  Y+PS P YSP+S     TS Y+P
Sbjct: 1620 SYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPYSP 1656

 Score =  112 bits (279), Expect = 3e-23
 Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP+Y+P +PSYSP+SP YSPSSP+ S TSP YSPSSP++SP 
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPT 1741

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P Y  S   QYTP
Sbjct: 1742 SPSYSPTSPSYGGS--PQYTP 1760

 Score =  111 bits (278), Expect = 4e-23
 Identities = 54/81 (66%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SPSYSPTSPSYSP+SP+YSP+SP  +  +P YSP+SP +SPS
Sbjct: 1661 YSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPS 1720

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            +  YSP+ P YSPSS  +Y+P
Sbjct: 1721 SPHYSPTSPSYSPSS-PKYSP 1740

 Score =  108 bits (271), Expect = 2e-22
 Identities = 55/83 (66%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSPSYSPTSP+YSP+SP+YSPSSP  S TSP YSP+SP +SP 
Sbjct: 1641 YSPTSPSYSPTSP-YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPT 1699

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  Y+P+ P YSP+S + Y+P +
Sbjct: 1700 SPNYTPATPSYSPTSPN-YSPSS 1721

 Score =  107 bits (267), Expect = 7e-22
 Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP  S +SP YSP+SP +SP 
Sbjct: 1634 YAPSSPAYSPTSPSYSPTSP-YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPT 1692

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P Y+P++ S      N +   P
Sbjct: 1693 SPSYSPTSPNYTPATPSYSPTSPNYSPSSP 1722

 Score =  105 bits (263), Expect = 2e-21
 Identities = 53/81 (65%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP YSPTSPSYSP+SP YSP+SP+YSP+SP + G SP Y+P+SPQ+SP 
Sbjct: 1710 YSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSP-SYGGSPQYTPASPQYSPT 1768

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPSS  Q++P
Sbjct: 1769 SPKYSPTSPSYSPSS-PQHSP 1788

 Score =  105 bits (262), Expect = 3e-21
 Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP Y+P +PSYSPTSP+YSP+SP YSP+SP+YSPSSP  S TSP YSP+SP +  S
Sbjct: 1696 YSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYGGS 1755

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              Y+P+ P YSP+S  +Y+P
Sbjct: 1756 PQYTPASPQYSPTS-PKYSP 1774

 Score =  103 bits (258), Expect = 7e-21
 Identities = 58/95 (61%), Positives = 68/95 (71%), Gaps = 14/95 (14%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPT------SPSYSPTSPS------YSPSSPTYSPSSPYNSGTSP 438
            +SP+SP YSPTSP YSPT      SP+YSPTSPS      YSP+SP+YSP+SP  S TSP
Sbjct: 1614 YSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPYSPTSPSYSPTSPAYSPTSP 1673

Query: 437  DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
             YSPSSP +SP S  YSP+ P YSP+S + YTP T
Sbjct: 1674 SYSPSSPSYSPTSPSYSPTSPSYSPTSPN-YTPAT 1707

 Score =  101 bits (252), Expect = 4e-20
 Identities = 57/106 (53%), Positives = 70/106 (66%), Gaps = 15/106 (14%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSPSYSP+SP YSPTSPSYSP+SP+Y   SP  +  SP YSP+SP++SP 
Sbjct: 1717 YSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYG-GSPQYTPASPQYSPTSPKYSPT 1775

Query: 404  STGYSPSQPGYSPSSTSQ--------YTPKT-----NDNKDDPGTQ 306
            S  YSPS P +SP S+          Y+P T     N +   PG+Q
Sbjct: 1776 SPSYSPSSPQHSPGSSGSNFMVNSPTYSPTTARYSPNMSSYSPGSQ 1821

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 56/98 (57%), Positives = 68/98 (69%), Gaps = 18/98 (18%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSP-------------SYSPSSPTYSPSSPYNSGT 444
            R+SP+SP YSPTSP+YSPTSPSYSPTSP             +YSP+SP+YSP+SPY S T
Sbjct: 1599 RYSPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPY-SPT 1657

Query: 443  SPDYSPSSPQFSPSTGYSPSQP----GYSPSSTSQYTP 342
            SP YSP+SP +SP+   SPS       YSP+S S Y+P
Sbjct: 1658 SPSYSPTSPAYSPT---SPSYSPSSPSYSPTSPS-YSP 1691

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 52/96 (54%), Positives = 64/96 (66%), Gaps = 17/96 (17%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY------SPTSPSYSPSSPTYSPSSPYNSGTSPDYSP-- 426
            +SPSSP YSPTSPSYSPTSPSY      +P SP YSP+SP YSP+SP  S +SP +SP  
Sbjct: 1731 YSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASPQYSPTSPKYSPTSPSYSPSSPQHSPGS 1790

Query: 425  -------SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
                   +SP +SP+T  YSP+   YSP S  +Y+P
Sbjct: 1791 SGSNFMVNSPTYSPTTARYSPNMSSYSPGS-QKYSP 1825

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 56/123 (45%), Positives = 67/123 (54%), Gaps = 35/123 (28%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSP------------------------------SY 495
            +++P+SP YSPTSP YSPTSPSYSP+SP                              SY
Sbjct: 1757 QYTPASPQYSPTSPKYSPTSPSYSPSSPQHSPGSSGSNFMVNSPTYSPTTARYSPNMSSY 1816

Query: 494  SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPG---YSPSSTSQYTPKTNDN 327
            SP S  YSP+SP  + TSP YSPSSP +SP+  GYSPS P    YSP+S     P   D+
Sbjct: 1817 SPGSQKYSPTSPVYTPTSPHYSPSSPAYSPTGQGYSPSSPASPTYSPTS-----PSYEDS 1871

Query: 326  KDD 318
             DD
Sbjct: 1872 VDD 1874

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 12/92 (13%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSPS-----YSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP  P SP+ SPSYSP+SP+Y+  SP      YSP+SP+YSP+SP  S TSP YSP+SP 
Sbjct: 1547 SPYFPSSPSASPSYSPSSPNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPN 1606

Query: 413  FSP-STGYSPSQPGYSPSS-----TSQYTPKT 336
            +SP S  YSP+ P YSP+S     T+ Y P +
Sbjct: 1607 YSPTSPNYSPTSPSYSPTSPLYSPTATYAPSS 1638

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 44/78 (56%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = -2

Query: 572  PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
            P SP SP  PS SP  PS    SPSYSPSSP Y+ +SP   G SP YSP+SP +SP S  
Sbjct: 1536 PGSPSSP-GPSMSPYFPSSPSASPSYSPSSPNYAAASP--GGASPGYSPTSPSYSPTSPN 1592

Query: 395  YSPSQPGYSPSSTSQYTP 342
            YSP+ P YSP+S + Y+P
Sbjct: 1593 YSPTSPRYSPTSPN-YSP 1609

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 41/96 (42%), Positives = 53/96 (55%), Gaps = 17/96 (17%)
 Frame = -2

Query: 578  FSPSSPYS---PTSPSYSPT--------SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
            +SPS P S   P  PS+SP+        SPS+SP   S S   P+ SP  P +   SP Y
Sbjct: 1501 WSPSGPPSGMTPGGPSFSPSAQSDASGMSPSWSPMPGSPSSPGPSMSPYFPSSPSASPSY 1560

Query: 431  SPSSPQFS------PSTGYSPSQPGYSPSSTSQYTP 342
            SPSSP ++       S GYSP+ P YSP+S + Y+P
Sbjct: 1561 SPSSPNYAAASPGGASPGYSPTSPSYSPTSPN-YSP 1595

[12][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
            thaliana RepID=RPB1_ARATH
          Length = 1840

 Score =  121 bits (304), Expect = 3e-26
 Identities = 61/96 (63%), Positives = 72/96 (75%), Gaps = 6/96 (6%)
 Frame = -2

Query: 581  RFSPSSPYSPT----SPS--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
            ++SPS  YSP+    SP+  YSPTSP+YSPTSPSYSP+SP+YSPSSP  S +SP  S +S
Sbjct: 1733 KYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 1792

Query: 419  PQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            P +SPS GYSP+ PGYSPSST QYTP   D KD  G
Sbjct: 1793 PDYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTG 1828

 Score =  117 bits (293), Expect = 6e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ PGYSP+S S Y+P
Sbjct: 1696 SPAYSPTSPGYSPTSPS-YSP 1715

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1587 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1646

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1647 SPAYSPTSPAYSPTSPS-YSP 1666

 Score =  117 bits (292), Expect = 8e-25
 Identities = 56/77 (72%), Positives = 66/77 (85%), Gaps = 2/77 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1643 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1702

Query: 404  STGYSPSQPGYSPSSTS 354
            S GYSP+ P YSP+S S
Sbjct: 1703 SPGYSPTSPSYSPTSPS 1719

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1580 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1640 SPAYSPTSPAYSPTSPA-YSP 1659

 Score =  116 bits (290), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  115 bits (289), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1674

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694

 Score =  115 bits (288), Expect = 2e-24
 Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP  S TSP YSP+SP +SP 
Sbjct: 1545 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 1604

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1605 SPSYSPTSPSYSPTSPS-YSP 1624

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y P+ P Y+P S ++Y+P
Sbjct: 1717 SPSYGPTSPSYNPQS-AKYSP 1736

 Score =  112 bits (279), Expect = 3e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1573 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1633 SPSYSPTSPAYSPTSPA-YSP 1652

 Score =  110 bits (276), Expect = 6e-23
 Identities = 53/81 (65%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1566 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1626 SPSYSPTSPSYSPTSPA-YSP 1645

 Score =  106 bits (265), Expect = 1e-21
 Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            FSPSS   YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP  S +SP YSP+SP +SP
Sbjct: 1537 FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 1596

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1597 TSPSYSPTSPSYSPTSPS-YSP 1617

 Score =  105 bits (261), Expect = 3e-21
 Identities = 55/100 (55%), Positives = 67/100 (67%), Gaps = 21/100 (21%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP  S TSP Y P+SP +   
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQ 1730

Query: 410  -----------------SPSTGYSPSQPGYSPSSTSQYTP 342
                             SP++ YSP+ P YSP+S S Y+P
Sbjct: 1731 SAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-YSP 1769

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 47/81 (58%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +FSP       SPS   +SP YSP+SP YSP+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1527 QFSPYVGGMAFSPS---SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 1583

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            + GYSP+ P YSP+S S Y+P
Sbjct: 1584 SPGYSPTSPAYSPTSPS-YSP 1603

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
 Frame = -2

Query: 575  SPSSPYSPTSPS-YSPT--SPSYSPTS-PSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            SP+   SP S + +SP     ++SP+S P YSPSSP YSP       TSP YSP+SP   
Sbjct: 1515 SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSP-------TSPGYSPTSP--- 1564

Query: 407  PSTGYSPSQPGYSPSSTSQYTPKT 336
               GYSP+ PGYSP+S + Y+P +
Sbjct: 1565 ---GYSPTSPGYSPTSPT-YSPSS 1584

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG------TSPDYSPSSPQFSP 405
            SP S T       SP+Y   SP+   S  + +  SPY  G      +SP YSPSSP +SP
Sbjct: 1496 SPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSP 1554

Query: 404  -STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
             S GYSP+ PGYSP+S          +   PG
Sbjct: 1555 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG 1586

[13][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA
          Length = 1943

 Score =  121 bits (303), Expect = 4e-26
 Identities = 60/82 (73%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP
Sbjct: 1689 RYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSP 1748

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ PGYSPSS  +Y+P
Sbjct: 1749 TSPSYSPASPGYSPSS-PRYSP 1769

 Score =  118 bits (295), Expect = 4e-25
 Identities = 60/83 (72%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSPSSP  S TSP YSP+SP +SPS
Sbjct: 1774 YSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPTYSPTSPAYSPS 1833

Query: 401  T-GYSPSQPGYSPSSTSQYTPKT 336
            +  YSPS P YSPSS  QYTP +
Sbjct: 1834 SPQYSPSSPQYSPSS-PQYTPSS 1855

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSP+YSPTSP+YSPTSP+YSP+SPTYSP+SP  S  SP YSPSSP++SP 
Sbjct: 1760 YSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPT 1819

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSPSS  QY+P +
Sbjct: 1820 SPTYSPTSPAYSPSS-PQYSPSS 1841

 Score =  115 bits (288), Expect = 2e-24
 Identities = 59/81 (72%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPSSP  S TSP YSP+SP +SP 
Sbjct: 1725 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPT 1784

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1785 SPAYSPTSPTYSPTSPS-YSP 1804

 Score =  113 bits (282), Expect = 1e-23
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP  S  SP YSPSSP++SP 
Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPT 1770

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1771 SPAYSPTSPTYSPTSPA-YSP 1790

 Score =  112 bits (279), Expect = 3e-23
 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP SP YSP+SP YSPTSP+YSP+SPTYSP+SP  S TSP YSP+SP +SP 
Sbjct: 1746 YSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPA 1805

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S GYSPS P YSP+S + Y+P
Sbjct: 1806 SPGYSPSSPRYSPTSPT-YSP 1825

 Score =  110 bits (276), Expect = 6e-23
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP  S +SP YSP+SP +SP 
Sbjct: 1718 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPT 1777

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1778 SPTYSPTSPAYSPTSPT-YSP 1797

 Score =  108 bits (271), Expect = 2e-22
 Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 1/82 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSP+SP YSPTSP+YSPTSP+YSPSSP YSPSSP  S +SP Y+PSSP    S
Sbjct: 1802 YSPASPGYSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDAS 1861

Query: 401  TGYSPSQPGYSPSSTSQYTPKT 336
              YSP+ P YSPSS  +Y+P +
Sbjct: 1862 PAYSPTSPQYSPSS-PRYSPSS 1882

 Score =  108 bits (271), Expect = 2e-22
 Identities = 58/93 (62%), Positives = 68/93 (73%), Gaps = 13/93 (13%)
 Frame = -2

Query: 581  RFSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS-----P 438
            +++PSSP       YSPTSP YSP+SP YSP+SP YSP+SP YSPSSP  +GTS     P
Sbjct: 1850 QYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSP 1909

Query: 437  DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
             YSPSSPQ+SPS+  YSPS P YSPSS  QY+P
Sbjct: 1910 QYSPSSPQYSPSSPQYSPSSPQYSPSS-PQYSP 1941

 Score =  108 bits (269), Expect = 4e-22
 Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 8/89 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GTSPDYSPSS 420
            +SPSSP YSPTSP+YSPTSP+YSP+SP YSPSSP YSPSSP  +        SP YSP+S
Sbjct: 1809 YSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTS 1868

Query: 419  PQFSPST-GYSPSQPGYSPSSTSQYTPKT 336
            PQ+SPS+  YSPS P YSP+S  QY+P +
Sbjct: 1869 PQYSPSSPRYSPSSPQYSPTS-PQYSPSS 1896

 Score =  106 bits (265), Expect = 1e-21
 Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            SP+SPY  +SP+Y   SP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1671 SPASPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1730

Query: 398  GYSPSQPGYSPSSTSQYTP 342
            GYSP+ P YSP+S S Y+P
Sbjct: 1731 GYSPTSPSYSPTSPS-YSP 1748

 Score =  102 bits (254), Expect = 2e-20
 Identities = 59/102 (57%), Positives = 69/102 (67%), Gaps = 20/102 (19%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP- 426
            ++SPSSP YSP+SP Y+P+SP+      YSPTSP YSPSSP YSPSSP  S TSP YSP 
Sbjct: 1836 QYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPS 1895

Query: 425  -----------SSPQFSPST-GYSPSQPGYSPSSTSQYTPKT 336
                       SSPQ+SPS+  YSPS P YSPSS  QY+P +
Sbjct: 1896 SPGGAGTSYSRSSPQYSPSSPQYSPSSPQYSPSS-PQYSPSS 1936

 Score =  102 bits (253), Expect = 3e-20
 Identities = 55/94 (58%), Positives = 67/94 (71%), Gaps = 13/94 (13%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPT------SPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
            +SPSSP YSP+SP YSP+SP Y+P+      SP+YSP+SP YSPSSP  S +SP YSP+S
Sbjct: 1830 YSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTS 1889

Query: 419  PQFSPS------TGYSPSQPGYSPSSTSQYTPKT 336
            PQ+SPS      T YS S P YSPSS  QY+P +
Sbjct: 1890 PQYSPSSPGGAGTSYSRSSPQYSPSS-PQYSPSS 1922

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 49/80 (61%), Positives = 60/80 (75%), Gaps = 4/80 (5%)
 Frame = -2

Query: 569  SSP-YSPTSPS--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SSP YSPTSP+  Y  +SP+Y   SP YSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1663 SSPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1722

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ PGYSP+S S Y+P
Sbjct: 1723 PSYSPTSPGYSPTSPS-YSP 1741

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 43/86 (50%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSP-----TSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            S +  YSP +  Y       +SP YSPTSP+  Y  SSP Y   SP  S TSP YSP+SP
Sbjct: 1643 SGAGAYSPAASDYGSGLEGLSSPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSP 1702

Query: 416  QFSP-STGYSPSQPGYSPSSTSQYTP 342
             +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1703 SYSPTSPSYSPTSPSYSPTSPS-YSP 1727

[14][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
            RepID=A3GID7_PICST
          Length = 1739

 Score =  120 bits (302), Expect = 6e-26
 Identities = 62/98 (63%), Positives = 74/98 (75%), Gaps = 11/98 (11%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1700

Query: 404  STGYSPSQPGYSPSST---------SQYTPKTNDNKDD 318
            S  YSP+ P YSP+S          S  +PKT D K++
Sbjct: 1701 SPSYSPTSPQYSPTSPQYSPGSPEYSPNSPKTEDKKNE 1738

 Score =  119 bits (297), Expect = 2e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1693

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1694 SPQYSPTSPSYSPTS-PQYSP 1713

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1673 SPSYSPTSPSYSPTS-PQYSP 1692

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1571 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1652 SPSYSPTSPSYSPTSPS-YSP 1671

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1564 YSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1623

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1624 SPSYSPTSPSYSPTSPS-YSP 1643

 Score =  112 bits (280), Expect = 2e-23
 Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1547 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1606

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1607 SPTSPSYSPTSPS-YSP 1622

 Score =  108 bits (269), Expect = 4e-22
 Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            S S  Y  TSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1538 SVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1597

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1598 SYSPTSPSYSPTSPS-YSP 1615

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 53/94 (56%), Positives = 62/94 (65%), Gaps = 17/94 (18%)
 Frame = -2

Query: 572  PSSPYSPTSP-SYSP---------------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
            P+SP S TSP SY                 TSPSYSPTSPSYSP+SP+YSP+SP  S TS
Sbjct: 1517 PTSP-SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1575

Query: 440  PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1576 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1608

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
 Frame = -2

Query: 575  SPSSPYS--PTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            S +SP+S   TSPS+  + SP Y  TSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP
Sbjct: 1521 SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSP 1580

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1581 TSPSYSPTSPSYSPTSPS-YSP 1601

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
 Frame = -2

Query: 551  TSPSYSPTSPSYSPTSP-SYSPSSPTYSPS-SPYNSGTSPDYSPSSPQFSP-STGYSPSQ 381
            TS    PTSPS   TSP SY  +SP++  S SP   GTSP YSP+SP +SP S  YSP+ 
Sbjct: 1511 TSYGGQPTSPS--ATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTS 1568

Query: 380  PGYSPSSTSQYTP 342
            P YSP+S + Y+P
Sbjct: 1569 PSYSPTSPA-YSP 1580

[15][TOP]
>UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1
            Tax=Pichia guilliermondii RepID=RPB1_PICGU
          Length = 1579

 Score =  120 bits (302), Expect = 6e-26
 Identities = 61/94 (64%), Positives = 73/94 (77%), Gaps = 8/94 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1483 YSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1542

Query: 404  STGYSPSQPGYSPSS------TSQYTPKTNDNKD 321
            S  YSP+ P YSP+S      +  Y+P  ND+KD
Sbjct: 1543 SPAYSPTSPQYSPNSPQYSPRSPLYSPDQNDDKD 1576

 Score =  118 bits (295), Expect = 4e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1462 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPT 1521

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1522 SPSYSPTSPSYSPTS-PQYSP 1541

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1399 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1458

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1459 SPSYSPTSPSYSPTSPS-YSP 1478

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1420 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1479

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1480 SPSYSPTSPSYSPTSPS-YSP 1499

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP+
Sbjct: 1441 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1500

Query: 401  TG-YSPSQPGYSPSSTSQYTP 342
            +  YSP+ P YSP+S S Y+P
Sbjct: 1501 SPLYSPTSPSYSPTSPS-YSP 1520

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1382 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1441

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1442 SPTSPSYSPTSPS-YSP 1457

 Score =  106 bits (264), Expect = 1e-21
 Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  Y  TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1375 SPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1434

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1435 SPTSPSYSPTSPS-YSP 1450

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 51/88 (57%), Positives = 61/88 (69%), Gaps = 10/88 (11%)
 Frame = -2

Query: 575  SPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            SP+SP         Y   SP Y  TSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+
Sbjct: 1357 SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1416

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1417 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1443

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 47/79 (59%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
 Frame = -2

Query: 572  PSSPYSPTSP-SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            P SP SPTSP +Y  TSP+Y   SP Y  +SPTYSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1353 PGSP-SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 1411

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1412 SYSPTSPSYSPTSPS-YSP 1429

[16][TOP]
>UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
            isoform 2 n=1 Tax=Hydra magnipapillata
            RepID=UPI00019270E9
          Length = 2014

 Score =  120 bits (301), Expect = 8e-26
 Identities = 61/81 (75%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSPSSPQ+SP 
Sbjct: 1699 YSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP  P YSPSS S Y+P
Sbjct: 1759 SPAYSPQSPSYSPSSPS-YSP 1778

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1615 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPSYSPTSPS-YSP 1701

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPKYSPTSPS-YSP 1743

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP+
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702

Query: 401  TG-YSPSQPGYSPSSTSQYTP 342
            +  YSP+ P YSP+S S Y+P
Sbjct: 1703 SPIYSPTSPSYSPTSPS-YSP 1722

 Score =  115 bits (289), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1601 YSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1661 SPSYSPTSPSYSPTSPS-YSP 1680

 Score =  115 bits (289), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/84 (67%), Positives = 69/84 (82%), Gaps = 2/84 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSPSYSP+SP YSPTSP+YSP SP+YSPSSP  S TSP YSP+SP++SP
Sbjct: 1733 KYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSP 1792

Query: 404  -STGYSPSQPGYSPSSTSQYTPKT 336
             S  YSP+ P YSPSS S Y+P +
Sbjct: 1793 TSPKYSPTSPSYSPSSPS-YSPSS 1815

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1692 YSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPS 1751

Query: 401  T-GYSPSQPGYSPSSTSQYTPKT 336
            +  YSP+ P YSP S S Y+P +
Sbjct: 1752 SPQYSPTSPAYSPQSPS-YSPSS 1773

 Score =  114 bits (286), Expect = 4e-24
 Identities = 57/83 (68%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPT 1744

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P YSP+S + Y+P++
Sbjct: 1745 SPSYSPSSPQYSPTSPA-YSPQS 1766

 Score =  114 bits (286), Expect = 4e-24
 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSPSYSPSSP+YSPSSP  S TSP YSP+SP +SP 
Sbjct: 1776 YSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPT 1835

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1836 SPAYSPTSPAYSPTSPA-YSP 1855

 Score =  113 bits (282), Expect = 1e-23
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP YSPTSP+YSP SPSYSPSSP+YSP+SP  S TSP YSP+SP++SP 
Sbjct: 1741 YSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPT 1800

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSPS P YSPSS + Y+P
Sbjct: 1801 SPSYSPSSPSYSPSSPN-YSP 1820

 Score =  113 bits (282), Expect = 1e-23
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SPSSP YSPTSP+YSP SPSYSP+SPSYSP+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1748 YSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPS 1807

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            +  YSPS P YSP+S + Y+P
Sbjct: 1808 SPSYSPSSPNYSPTSPT-YSP 1827

 Score =  112 bits (280), Expect = 2e-23
 Identities = 57/80 (71%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SPSSP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1588 SPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTS 1647

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1648 PSYSPTSPSYSPTSPS-YSP 1666

 Score =  112 bits (280), Expect = 2e-23
 Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSPSYSPTSPSYSPSSP YSP+SP  S  SP YSPSSP +SP 
Sbjct: 1720 YSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPT 1779

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1780 SPKYSPTSPKYSPTS-PKYSP 1799

 Score =  111 bits (278), Expect = 4e-23
 Identities = 55/82 (67%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSP SPSYSP+SPSYSPTSP YSP+SP YSP+SP  S TSP YSPSSP +SP
Sbjct: 1754 QYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSP 1813

Query: 404  ST-GYSPSQPGYSPSSTSQYTP 342
            S+  YSP+ P YSP+S + Y+P
Sbjct: 1814 SSPNYSPTSPTYSPTSPT-YSP 1834

 Score =  110 bits (276), Expect = 6e-23
 Identities = 54/82 (65%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSP+SPSYSP+SP+YSPTSP+YSP+SPTYSP+SP  S TSP YSP+SP +SP
Sbjct: 1796 KYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSP 1855

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S  +Y+P
Sbjct: 1856 TSPVYSPTSPAYSPTS-PKYSP 1876

 Score =  110 bits (276), Expect = 6e-23
 Identities = 59/108 (54%), Positives = 71/108 (65%), Gaps = 29/108 (26%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP++SP 
Sbjct: 1818 YSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPT 1877

Query: 404  ---------------------STGYSPSQPGYSPSS------TSQYTP 342
                                 STGYSP+ P YSPSS      T QY+P
Sbjct: 1878 SPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSP 1925

 Score =  107 bits (266), Expect = 9e-22
 Identities = 54/97 (55%), Positives = 63/97 (64%), Gaps = 17/97 (17%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP+YSPTS  YSPTSP YSPSSP YSP++P  S TSP YSP+SP +SP
Sbjct: 1880 KYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSP 1939

Query: 404  ST----------------GYSPSQPGYSPSSTSQYTP 342
            ST                 YSP  P YSP  T  Y+P
Sbjct: 1940 STPTDKSVGSINYSPLEPDYSPGTPTYSPDGTPTYSP 1976

 Score =  106 bits (265), Expect = 1e-21
 Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            F+P SP  SP+SP YSPTSP YSPTSP YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1580 FNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPT 1639

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1640 SPSYSPTSPSYSPTSPS-YSP 1659

 Score =  103 bits (258), Expect = 7e-21
 Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPT 1709

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S  YSP+ P YSP+S  +Y+P
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTS-PKYSP 1736

 Score =  103 bits (258), Expect = 7e-21
 Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSPTSP YSPTSPSYSP+SP+YSPSSP  S TSP YSP 
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQ 1765

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  YSP+ P YSP+S  +Y+P
Sbjct: 1766 SPSYSPSSPSYSPTSPKYSPTS-PKYSP 1792

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/99 (56%), Positives = 69/99 (69%), Gaps = 9/99 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP+YSP+S  YSP+SP  S +SP YSP++PQ+SP 
Sbjct: 1867 YSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPT 1926

Query: 404  STGYSPSQPGYSPSSTS-------QYTPKTNDNKDDPGT 309
            S  YSP+ P YSPS+ +        Y+P   D    PGT
Sbjct: 1927 SPKYSPASPTYSPSTPTDKSVGSINYSPLEPDY--SPGT 1963

 Score =  101 bits (251), Expect = 5e-20
 Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP ++P SP+ SP+SP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1573 YSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPT 1632

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPSYSPTSPS-YSP 1652

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/86 (56%), Positives = 62/86 (72%), Gaps = 7/86 (8%)
 Frame = -2

Query: 578  FSPSSPYSP------TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            FSP+  +SP      + PSYSP SP+++P SP+ SPSSP YSP+SP  S TSP YSP+SP
Sbjct: 1554 FSPAGGFSPAWSPQDSIPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSP 1613

Query: 416  QFSP-STGYSPSQPGYSPSSTSQYTP 342
             +SP S GYSP+ P YSP+S S Y+P
Sbjct: 1614 SYSPTSPGYSPTSPSYSPTSPS-YSP 1638

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 47/99 (47%), Positives = 57/99 (57%), Gaps = 24/99 (24%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP----------------YNS 450
            +SP+SP YSP+SP YSPT+P YSPTSP YSP+SPTYSPS+P                Y+ 
Sbjct: 1902 YSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSP 1961

Query: 449  GT-------SPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 354
            GT       +P YSP    FS +   + S   YSPSS S
Sbjct: 1962 GTPTYSPDGTPTYSPDGRGFSGTAAKNISPMDYSPSSPS 2000

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPS----YSPT---SPSYSP--SSPTYSPSSPYNSGTSPDYSPSSPQ 414
            S  +P + S+SP++ S    +SP    SP++SP  S P+YSP+SP  +  SP  SPSSP 
Sbjct: 1534 SGMTPGAASFSPSAHSDASGFSPAGGFSPAWSPQDSIPSYSPNSPAFNPQSPAMSPSSP- 1592

Query: 413  FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
                 GYSP+ P YSP+S        + +   PG
Sbjct: 1593 -----GYSPTSPLYSPTSPGYSPTSPSYSPTSPG 1621

[17][TOP]
>UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
            isoform 1 n=1 Tax=Hydra magnipapillata
            RepID=UPI00019270BB
          Length = 2041

 Score =  120 bits (301), Expect = 8e-26
 Identities = 61/81 (75%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSPSSPQ+SP 
Sbjct: 1726 YSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPT 1785

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP  P YSPSS S Y+P
Sbjct: 1786 SPAYSPQSPSYSPSSPS-YSP 1805

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1642 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSP 1721

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1709 SPSYSPTSPSYSPTSPS-YSP 1728

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPT 1750

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1751 SPSYSPTSPKYSPTSPS-YSP 1770

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP+
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729

Query: 401  TG-YSPSQPGYSPSSTSQYTP 342
            +  YSP+ P YSP+S S Y+P
Sbjct: 1730 SPIYSPTSPSYSPTSPS-YSP 1749

 Score =  115 bits (289), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1628 YSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707

 Score =  115 bits (289), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1635 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/84 (67%), Positives = 69/84 (82%), Gaps = 2/84 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSPSYSP+SP YSPTSP+YSP SP+YSPSSP  S TSP YSP+SP++SP
Sbjct: 1760 KYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSP 1819

Query: 404  -STGYSPSQPGYSPSSTSQYTPKT 336
             S  YSP+ P YSPSS S Y+P +
Sbjct: 1820 TSPKYSPTSPSYSPSSPS-YSPSS 1842

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1719 YSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPS 1778

Query: 401  T-GYSPSQPGYSPSSTSQYTPKT 336
            +  YSP+ P YSP S S Y+P +
Sbjct: 1779 SPQYSPTSPAYSPQSPS-YSPSS 1800

 Score =  114 bits (286), Expect = 4e-24
 Identities = 57/83 (68%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPT 1771

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P YSP+S + Y+P++
Sbjct: 1772 SPSYSPSSPQYSPTSPA-YSPQS 1793

 Score =  114 bits (286), Expect = 4e-24
 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSPSYSPSSP+YSPSSP  S TSP YSP+SP +SP 
Sbjct: 1803 YSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPT 1862

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1863 SPAYSPTSPAYSPTSPA-YSP 1882

 Score =  113 bits (282), Expect = 1e-23
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP YSPTSP+YSP SPSYSPSSP+YSP+SP  S TSP YSP+SP++SP 
Sbjct: 1768 YSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPT 1827

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSPS P YSPSS + Y+P
Sbjct: 1828 SPSYSPSSPSYSPSSPN-YSP 1847

 Score =  113 bits (282), Expect = 1e-23
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SPSSP YSPTSP+YSP SPSYSP+SPSYSP+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1775 YSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPS 1834

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            +  YSPS P YSP+S + Y+P
Sbjct: 1835 SPSYSPSSPNYSPTSPT-YSP 1854

 Score =  112 bits (280), Expect = 2e-23
 Identities = 57/80 (71%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SPSSP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1615 SPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTS 1674

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1675 PSYSPTSPSYSPTSPS-YSP 1693

 Score =  112 bits (280), Expect = 2e-23
 Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSPSYSPTSPSYSPSSP YSP+SP  S  SP YSPSSP +SP 
Sbjct: 1747 YSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPT 1806

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1807 SPKYSPTSPKYSPTS-PKYSP 1826

 Score =  111 bits (278), Expect = 4e-23
 Identities = 55/82 (67%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSP SPSYSP+SPSYSPTSP YSP+SP YSP+SP  S TSP YSPSSP +SP
Sbjct: 1781 QYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSP 1840

Query: 404  ST-GYSPSQPGYSPSSTSQYTP 342
            S+  YSP+ P YSP+S + Y+P
Sbjct: 1841 SSPNYSPTSPTYSPTSPT-YSP 1861

 Score =  110 bits (276), Expect = 6e-23
 Identities = 54/82 (65%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSP+SPSYSP+SP+YSPTSP+YSP+SPTYSP+SP  S TSP YSP+SP +SP
Sbjct: 1823 KYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSP 1882

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S  +Y+P
Sbjct: 1883 TSPVYSPTSPAYSPTS-PKYSP 1903

 Score =  110 bits (276), Expect = 6e-23
 Identities = 59/108 (54%), Positives = 71/108 (65%), Gaps = 29/108 (26%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP++SP 
Sbjct: 1845 YSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPT 1904

Query: 404  ---------------------STGYSPSQPGYSPSS------TSQYTP 342
                                 STGYSP+ P YSPSS      T QY+P
Sbjct: 1905 SPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSP 1952

 Score =  107 bits (266), Expect = 9e-22
 Identities = 54/97 (55%), Positives = 63/97 (64%), Gaps = 17/97 (17%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP+YSPTS  YSPTSP YSPSSP YSP++P  S TSP YSP+SP +SP
Sbjct: 1907 KYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSP 1966

Query: 404  ST----------------GYSPSQPGYSPSSTSQYTP 342
            ST                 YSP  P YSP  T  Y+P
Sbjct: 1967 STPTDKSVGSINYSPLEPDYSPGTPTYSPDGTPTYSP 2003

 Score =  106 bits (265), Expect = 1e-21
 Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            F+P SP  SP+SP YSPTSP YSPTSP YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1607 FNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPT 1666

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686

 Score =  103 bits (258), Expect = 7e-21
 Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPT 1736

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S  YSP+ P YSP+S  +Y+P
Sbjct: 1737 SPSYSPTSPSYSPTSPSYSPTS-PKYSP 1763

 Score =  103 bits (258), Expect = 7e-21
 Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSPTSP YSPTSPSYSP+SP+YSPSSP  S TSP YSP 
Sbjct: 1733 YSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQ 1792

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  YSP+ P YSP+S  +Y+P
Sbjct: 1793 SPSYSPSSPSYSPTSPKYSPTS-PKYSP 1819

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/99 (56%), Positives = 69/99 (69%), Gaps = 9/99 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP+YSP+S  YSP+SP  S +SP YSP++PQ+SP 
Sbjct: 1894 YSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPT 1953

Query: 404  STGYSPSQPGYSPSSTS-------QYTPKTNDNKDDPGT 309
            S  YSP+ P YSPS+ +        Y+P   D    PGT
Sbjct: 1954 SPKYSPASPTYSPSTPTDKSVGSINYSPLEPDY--SPGT 1990

 Score =  101 bits (251), Expect = 5e-20
 Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP ++P SP+ SP+SP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1600 YSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPT 1659

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1660 SPSYSPTSPSYSPTSPS-YSP 1679

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 7/83 (8%)
 Frame = -2

Query: 569  SSPYSPT------SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            SSPY P+      SPSYSP SP+++P SP+ SPSSP YSP+SP  S TSP YSP+SP +S
Sbjct: 1584 SSPYIPSPSRNVMSPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYS 1643

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S GYSP+ P YSP+S S Y+P
Sbjct: 1644 PTSPGYSPTSPSYSPTSPS-YSP 1665

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  YSP SP+++P SP+ SP+SP YSP+SP YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1597 SPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSY 1656

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1657 SPTSPSYSPTSPS-YSP 1672

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 47/99 (47%), Positives = 57/99 (57%), Gaps = 24/99 (24%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP----------------YNS 450
            +SP+SP YSP+SP YSPT+P YSPTSP YSP+SPTYSPS+P                Y+ 
Sbjct: 1929 YSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSP 1988

Query: 449  GT-------SPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 354
            GT       +P YSP    FS +   + S   YSPSS S
Sbjct: 1989 GTPTYSPDGTPTYSPDGRGFSGTAAKNISPMDYSPSSPS 2027

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 41/94 (43%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
 Frame = -2

Query: 578  FSPSSPYSPT-SP--SYSPTSPSYSP--TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            FSP+  +SP  SP  S S  SP  SP   SPS +  SP+YSP+SP  +  SP  SPSSP 
Sbjct: 1561 FSPAGGFSPAWSPQDSMSLGSPDSSPYIPSPSRNVMSPSYSPNSPAFNPQSPAMSPSSP- 1619

Query: 413  FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
                 GYSP+ P YSP+S        + +   PG
Sbjct: 1620 -----GYSPTSPLYSPTSPGYSPTSPSYSPTSPG 1648

[18][TOP]
>UniRef100_UPI000051AA8E PREDICTED: similar to DNA-directed RNA polymerase II largest
           subunit (RPB1) n=1 Tax=Apis mellifera
           RepID=UPI000051AA8E
          Length = 452

 Score =  120 bits (301), Expect = 8e-26
 Identities = 61/81 (75%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P+SP  S TSP YSPSSPQ+SP 
Sbjct: 251 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPA 310

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSPS P YSP+S S Y+P
Sbjct: 311 SPSYSPSSPKYSPTSPS-YSP 330

 Score =  119 bits (297), Expect = 2e-25
 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 209 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 268

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSPSS + YTP
Sbjct: 269 SPSYSPTSPSYSPSSPN-YTP 288

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 202 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 261

Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
           S  YSP+ P YSP+S S Y+P +
Sbjct: 262 SPSYSPTSPSYSPTSPS-YSPSS 283

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 160 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 219

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 220 SPSYSPTSPSYSPTSPS-YSP 239

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 167 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 226

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 227 SPSYSPTSPSYSPTSPS-YSP 246

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 188 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 247

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 248 SPSYSPTSPSYSPTSPS-YSP 267

 Score =  117 bits (293), Expect = 6e-25
 Identities = 57/83 (68%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 223 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 282

Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336
           +  Y+P+ P YSP+S S Y+P +
Sbjct: 283 SPNYTPASPSYSPTSPS-YSPSS 304

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 153 YSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 212

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 213 SPSYSPTSPSYSPTSPS-YSP 232

 Score =  114 bits (284), Expect = 7e-24
 Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
           +PSSP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 147 TPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 206

Query: 401 TGYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 207 PSYSPTSPSYSPTSPS-YSP 225

 Score =  110 bits (276), Expect = 6e-23
 Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 9/90 (10%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--S 408
           +SPSSP YSPTSPSYSPTSPS++ TSP Y+P+SPTYSP+SP  S TSP YSPSSPQ   S
Sbjct: 314 YSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPTYSPTSPTYSPTSPSYSPSSPQHTAS 373

Query: 407 PSTGYSPSQPGYSPSS------TSQYTPKT 336
            ST YSPS P YSP+S      + QY+P +
Sbjct: 374 GSTRYSPSSPNYSPTSPTYSPTSPQYSPSS 403

 Score =  104 bits (260), Expect = 4e-21
 Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 9/90 (10%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYS       P+SP+YSP+SP  S +SP+Y+P+
Sbjct: 230 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPA 289

Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
           SP +SP S  YSPS P YSP+S S Y+P +
Sbjct: 290 SPSYSPTSPSYSPSSPQYSPASPS-YSPSS 318

 Score =  104 bits (259), Expect = 6e-21
 Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 10/88 (11%)
 Frame = -2

Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
           +SPSSP         YSP+SP+YSPTSP+YSPTSP YSPSS  YSP+SP  + TSP YSP
Sbjct: 363 YSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPTYTPTSPSYSP 422

Query: 425 SSPQFSPST-GYSPSQPGYSPSSTSQYT 345
           +SP +SP   GYSP+ P YSP+S +  T
Sbjct: 423 TSPTYSPPVPGYSPTSPTYSPASPAYET 450

 Score =  103 bits (258), Expect = 7e-21
 Identities = 50/77 (64%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
           S  YSPTSP+Y PTSPS +P+SP+YSP+SPTYSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 129 SPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 188

Query: 392 SPSQPGYSPSSTSQYTP 342
           SP+ P YSP+S S Y+P
Sbjct: 189 SPTSPSYSPTSPS-YSP 204

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/88 (59%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSP+SP+Y+P SPSYSPTSPSYSPSSP YSP+SP  S +SP YSP+SP +SP 
Sbjct: 272 YSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPT 331

Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342
                  S  Y+P+ P YSP+S + Y+P
Sbjct: 332 SPSFAGTSPQYTPASPTYSPTSPT-YSP 358

 Score =  101 bits (252), Expect = 4e-20
 Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
 Frame = -2

Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
           P SP    SPSYSPTSP+Y PTSPS +PSSP YSP+SP  S TSP+YSP+SP +SP S  
Sbjct: 121 PMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPS 180

Query: 395 YSPSQPGYSPSSTSQYTP 342
           YSP+ P YSP+S S Y+P
Sbjct: 181 YSPTSPSYSPTSPS-YSP 197

 Score =  101 bits (251), Expect = 5e-20
 Identities = 53/90 (58%), Positives = 67/90 (74%), Gaps = 10/90 (11%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPS--------YSPSSPTYSPSSPYNSGTSPDYS 429
           +++P+SP YSPTSP+YSPTSPSYSP+SP         YSPSSP YSP+SP  S TSP YS
Sbjct: 341 QYTPASPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYS 400

Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           PSS ++SP S  Y+P+ P YSP+S + Y+P
Sbjct: 401 PSSTKYSPTSPTYTPTSPSYSPTSPT-YSP 429

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 53/97 (54%), Positives = 70/97 (72%), Gaps = 16/97 (16%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423
           ++P+SP YSPTSPSYSP+SP YSP SPSYS       P+SP+YSP+SP  +GTSP Y+P+
Sbjct: 286 YTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPA 345

Query: 422 SPQFSP-STGYSPSQPGYSPSS-------TSQYTPKT 336
           SP +SP S  YSP+ P YSPSS       +++Y+P +
Sbjct: 346 SPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSS 382

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 42/86 (48%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
 Frame = -2

Query: 578 FSPS--SPYSPTSPSYSPTSPSY-SPTSPSYSPSSPTYSPS---SPYNSGTSPDYSPSSP 417
           FSPS  S  S  SP+YS  SP   SP SP  S S    SP+   SP  S TSP Y P+SP
Sbjct: 85  FSPSGASDASGLSPAYSAYSPQPGSPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSP 144

Query: 416 QFSPST-GYSPSQPGYSPSSTSQYTP 342
             +PS+  YSP+ P YSP+S + Y+P
Sbjct: 145 SITPSSPNYSPTSPTYSPTSPN-YSP 169

[19][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
            RepID=Q6CBQ3_YARLI
          Length = 1750

 Score =  120 bits (301), Expect = 8e-26
 Identities = 61/94 (64%), Positives = 74/94 (78%), Gaps = 8/94 (8%)
 Frame = -2

Query: 578  FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSS 420
            +SP+SP      YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSPSSP +N+G S  YSP+S
Sbjct: 1654 YSPTSPSYSPTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKFNAGASTSYSPTS 1713

Query: 419  PQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKD 321
            P +SP S  YSP+ P YSP+S S Y+P + D+KD
Sbjct: 1714 PSYSPTSPSYSPTSPSYSPTSPS-YSPGSGDSKD 1746

 Score =  119 bits (297), Expect = 2e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1591 YSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S  +P
Sbjct: 1651 SPSYSPTSPSYSPTSYSPTSP 1671

 Score =  115 bits (288), Expect = 2e-24
 Identities = 59/88 (67%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            FSPSSP        YSP+SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+
Sbjct: 1577 FSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1663

 Score =  110 bits (275), Expect = 8e-23
 Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 7/80 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YN----SGTSPDYSPSSP 417
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP Y+    S TSP YSP+SP
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSYSPTSPSYSPTSP 1678

Query: 416  QFSP-STGYSPSQPGYSPSS 360
             +SP S  YSP+ P YSPSS
Sbjct: 1679 SYSPTSPSYSPTSPSYSPSS 1698

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP----------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SPSSP          +SP+SP+++ TSPSYSP+SPSYSP+SP+YSP+SP  S TSP YS
Sbjct: 1561 YSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYS 1620

Query: 428  PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1649

 Score =  100 bits (249), Expect = 8e-20
 Identities = 58/95 (61%), Positives = 69/95 (72%), Gaps = 14/95 (14%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSP----- 438
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYS       P+SP+YSP+SP  S TSP     
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1664

Query: 437  DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
             YSP+SP +SP S  YSP+ P YSP+S S Y+P +
Sbjct: 1665 SYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPSS 1698

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSP---------SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            F  +SP ++ TSPSYSP+SP         S+SP+SP+++ +SP+YSPSSP  S TSP YS
Sbjct: 1547 FGAASPGFAATSPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYS 1606

Query: 428  PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1607 PTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 51/106 (48%), Positives = 64/106 (60%), Gaps = 27/106 (25%)
 Frame = -2

Query: 578  FSPSSPYSP---TSPSYSPTSPSYSP-----------------------TSPSYSPSSPT 477
            ++P+SP+S     SP ++ TSPSYSP                       TSPSYSPSSP+
Sbjct: 1538 YTPTSPFSSFGAASPGFAATSPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPS 1597

Query: 476  YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            YSP+SP  S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1642

[20][TOP]
>UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
            RepID=A7S8F9_NEMVE
          Length = 1929

 Score =  120 bits (300), Expect = 1e-25
 Identities = 58/83 (69%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1765

Query: 401  T-GYSPSQPGYSPSSTSQYTPKT 336
            +  YSPS P YSP S S  +P +
Sbjct: 1766 SPSYSPSSPSYSPQSPSYASPSS 1788

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSP+S S Y+P +
Sbjct: 1745 SPSYSPTSPSYSPTSPS-YSPSS 1766

 Score =  117 bits (294), Expect = 5e-25
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSPSSP +SPS
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPS 1772

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            +  YSP  P Y+  S+ +Y+P
Sbjct: 1773 SPSYSPQSPSYASPSSPKYSP 1793

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPSYSPTSPS-YSP 1722

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/79 (72%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            SPSS YSP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1624 SPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701

 Score =  115 bits (288), Expect = 2e-24
 Identities = 58/80 (72%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SPSSP YSP SPSYSPTSP YSPTSP+YSP+SP+YSPSSP  S TSP Y+P+SP +SP S
Sbjct: 1785 SPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPAS 1844

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSPS P YSPSS  +YTP
Sbjct: 1845 PSYSPSSPSYSPSS-PRYTP 1863

 Score =  112 bits (279), Expect = 3e-23
 Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S +SP YSPSSP +SP 
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQ 1779

Query: 404  --------STGYSPSQPGYSPSSTSQYTP 342
                    S  YSP+ P YSP+S  +Y+P
Sbjct: 1780 SPSYASPSSPKYSPASPSYSPTS-PKYSP 1807

 Score =  111 bits (277), Expect = 5e-23
 Identities = 60/96 (62%), Positives = 69/96 (71%), Gaps = 17/96 (17%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP--------YNSGTSPDYSP 426
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP+YSPSSP        Y S +SP YSP
Sbjct: 1734 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSSPKYSP 1793

Query: 425  SSPQFSP--------STGYSPSQPGYSPSSTSQYTP 342
            +SP +SP        S  YSP+ P YSPSS  +Y+P
Sbjct: 1794 ASPSYSPTSPKYSPTSPNYSPASPSYSPSS-PKYSP 1828

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP YSPTSPSY+P SPSYSP+SP+YSPSSP  S +SP Y+P+SPQ+SP 
Sbjct: 1812 YSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPT 1871

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP +T  YTP
Sbjct: 1872 SPKYSPASPNYSP-TTPSYTP 1891

 Score =  110 bits (275), Expect = 8e-23
 Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSPSY+P SPSYSP SPSYSPSSP+YSPSSP  + TSP YSP+SP++SP 
Sbjct: 1819 YSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPA 1878

Query: 404  STGYSPSQPGYSPSS 360
            S  YSP+ P Y+P S
Sbjct: 1879 SPNYSPTTPSYTPMS 1893

 Score =  109 bits (273), Expect = 1e-22
 Identities = 53/84 (63%), Positives = 69/84 (82%), Gaps = 2/84 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSP SPSYSP+SP YSPTSPSY+P+SP+YSP+SP  S +SP YSPSSP+++P
Sbjct: 1804 KYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTP 1863

Query: 404  -STGYSPSQPGYSPSSTSQYTPKT 336
             S  YSP+ P YSP+S + Y+P T
Sbjct: 1864 TSPQYSPTSPKYSPASPN-YSPTT 1886

 Score =  109 bits (272), Expect = 2e-22
 Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 9/90 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1751

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
            SP +SP S  YSPS P YSPSS S Y+P++
Sbjct: 1752 SPSYSPTSPSYSPSSPSYSPSSPS-YSPQS 1780

 Score =  108 bits (271), Expect = 2e-22
 Identities = 56/83 (67%), Positives = 67/83 (80%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPS--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP YSP+SPS  YSP SPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +S
Sbjct: 1613 YSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1672

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S S Y+P
Sbjct: 1673 PTSPSYSPTSPSYSPTSPS-YSP 1694

 Score =  106 bits (264), Expect = 1e-21
 Identities = 55/82 (67%), Positives = 65/82 (79%), Gaps = 4/82 (4%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPS--YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            SP+SP YSPTSP YSP+SPS  YSP SPSYSP+SP+YSP+SP  S TSP YSP+SP +SP
Sbjct: 1607 SPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1667 TSPSYSPTSPSYSPTSPS-YSP 1687

 Score =  106 bits (264), Expect = 1e-21
 Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP+YSP SPSYSP+SP YSP+SP+Y+P+SP  S  SP YSPSSP +SPS
Sbjct: 1798 YSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPS 1857

Query: 401  TG-YSPSQPGYSPSSTSQYTP 342
            +  Y+P+ P YSP+S  +Y+P
Sbjct: 1858 SPRYTPTSPQYSPTS-PKYSP 1877

 Score =  104 bits (260), Expect = 4e-21
 Identities = 55/83 (66%), Positives = 64/83 (77%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            F PSSP  SP SPSYSPTSP YSP+SPS  YSP+SP+YSP+SP  S TSP YSP+SP +S
Sbjct: 1599 FMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYS 1658

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPS-YSP 1680

 Score =  103 bits (256), Expect = 1e-20
 Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPSSPQFS 408
            +SPSSP + P+SPS SP SPSYSPTSP YSPSSP+  YSP+SP  S TSP YSP+SP +S
Sbjct: 1592 YSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYS 1651

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S S Y+P
Sbjct: 1652 PTSPSYSPTSPSYSPTSPS-YSP 1673

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/84 (64%), Positives = 64/84 (76%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP---Q 414
            ++SP+SP YSPTSP YSPTSP+YSP SPSYSPSSP YSP+SP  +  SP YSP+SP    
Sbjct: 1790 KYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSP 1849

Query: 413  FSPSTGYSPSQPGYSPSSTSQYTP 342
             SPS  YSPS P Y+P+S  QY+P
Sbjct: 1850 SSPS--YSPSSPRYTPTS-PQYSP 1870

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 56/98 (57%), Positives = 69/98 (70%), Gaps = 17/98 (17%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY-SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +SPSSP YSP+SPSYSP SPSY SP+SP YSP+SP+YSP+SP  S TSP+YSP+SP +SP
Sbjct: 1762 YSPSSPSYSPSSPSYSPQSPSYASPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSP 1821

Query: 404  STG-YSPSQP--------------GYSPSSTSQYTPKT 336
            S+  YSP+ P               YSPSS S Y+P +
Sbjct: 1822 SSPKYSPTSPSYTPASPSYSPASPSYSPSSPS-YSPSS 1858

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 3/79 (3%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN--SGTSPDYSPSSPQFSP-ST 399
            S  YSP+SP++ P+SPS SP SPSYSP+SP YSPSSP +  S  SP YSP+SP +SP S 
Sbjct: 1589 SPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSP 1648

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1649 SYSPTSPSYSPTSPS-YSP 1666

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 38/63 (60%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            ++P+SP YSP SPSYSP+SPSYSP+SP Y+P+SP YSP+SP  S  SP+YSP++P ++P 
Sbjct: 1833 YTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTTPSYTPM 1892

Query: 401  TGY 393
            +G+
Sbjct: 1893 SGH 1895

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 43/74 (58%), Positives = 53/74 (71%)
 Frame = -2

Query: 563  PYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPS 384
            P SP  PS +  SP YSP+SP++ PSSP+ SP+SP  S TSP YSPS    SPS+GYSP+
Sbjct: 1577 PTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPS----SPSSGYSPA 1632

Query: 383  QPGYSPSSTSQYTP 342
             P YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPS-YSP 1645

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 37/59 (62%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +SP+SP YSP+SPSYSP+SP Y+PTSP YSP+SP YSP+SP  S T+P Y+P S    P
Sbjct: 1840 YSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTTPSYTPMSGHIVP 1898

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 47/84 (55%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
 Frame = -2

Query: 578  FSPS----SPYSPTSPS-YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            FSPS    +P SP SP   SP  PS +  SP YSPSSP + PSSP  S  SP YSP+SP 
Sbjct: 1560 FSPSWMSPTPGSPVSPGPTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPG 1619

Query: 413  FSPSTGYSPSQPGYSPSSTSQYTP 342
            +SPS   SPS  GYSP+S S Y+P
Sbjct: 1620 YSPS---SPSS-GYSPASPS-YSP 1638

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 41/91 (45%), Positives = 51/91 (56%), Gaps = 12/91 (13%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY---NSGTSPDYSPSSPQFS 408
            FSPS+    +  S    SPS+   +P  SP SP   P+SPY    +  SP YSPSSP F 
Sbjct: 1544 FSPSAASDASGMSPGGFSPSWMSPTPG-SPVSP--GPTSPYIPSPAAASPGYSPSSPAFM 1600

Query: 407  PST--------GYSPSQPGYSPSS-TSQYTP 342
            PS+         YSP+ PGYSPSS +S Y+P
Sbjct: 1601 PSSPSMSPASPSYSPTSPGYSPSSPSSGYSP 1631

[21][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
            subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
            RepID=UPI0000F24379
          Length = 1739

 Score =  119 bits (299), Expect = 1e-25
 Identities = 61/98 (62%), Positives = 75/98 (76%), Gaps = 11/98 (11%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP+
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1700

Query: 401  TG-YSPSQPGYSPSST---------SQYTPKTNDNKDD 318
            +  YSP+ P YSP+S          S  +PKT D K++
Sbjct: 1701 SPLYSPTSPQYSPTSPQYSPGSPEYSPNSPKTEDKKNE 1738

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1673 SPSYSPTSPSYSPTS-PQYSP 1692

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1571 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1652 SPSYSPTSPSYSPTSPS-YSP 1671

 Score =  117 bits (293), Expect = 6e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1693

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1694 SPQYSPTSPLYSPTS-PQYSP 1713

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1564 YSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1623

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1624 SPSYSPTSPSYSPTSPS-YSP 1643

 Score =  112 bits (280), Expect = 2e-23
 Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1547 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1606

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1607 SPTSPSYSPTSPS-YSP 1622

 Score =  108 bits (269), Expect = 4e-22
 Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            S S  Y  TSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1538 SVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1597

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1598 SYSPTSPSYSPTSPS-YSP 1615

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 53/94 (56%), Positives = 62/94 (65%), Gaps = 17/94 (18%)
 Frame = -2

Query: 572  PSSPYSPTSP-SYSP---------------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
            P+SP S TSP SY                 TSPSYSPTSPSYSP+SP+YSP+SP  S TS
Sbjct: 1517 PTSP-SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1575

Query: 440  PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1576 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1608

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
 Frame = -2

Query: 575  SPSSPYS--PTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            S +SP+S   TSPS+  + SP Y  TSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP
Sbjct: 1521 SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSP 1580

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1581 TSPSYSPTSPSYSPTSPS-YSP 1601

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
 Frame = -2

Query: 551  TSPSYSPTSPSYSPTSP-SYSPSSPTYSPS-SPYNSGTSPDYSPSSPQFSP-STGYSPSQ 381
            TS    PTSPS   TSP SY  +SP++  S SP   GTSP YSP+SP +SP S  YSP+ 
Sbjct: 1511 TSYGGQPTSPS--ATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTS 1568

Query: 380  PGYSPSSTSQYTP 342
            P YSP+S + Y+P
Sbjct: 1569 PSYSPTSPA-YSP 1580

[22][TOP]
>UniRef100_Q6ZJR1 DNA-directed RNA polymerase largest chain-like protein n=1
           Tax=Oryza sativa Japonica Group RepID=Q6ZJR1_ORYSJ
          Length = 138

 Score =  119 bits (299), Expect = 1e-25
 Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 7/90 (7%)
 Frame = -2

Query: 578 FSPSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY--NSGTSPDYSPSSP 417
           +SPSSP    YS TSP+YSPTSP+YSPTSPSYS  SP+YSP+SPY  + G SPDYSP+SP
Sbjct: 42  YSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSP 101

Query: 416 QFSPSTGYSPSQPGYSPSST-SQYTPKTND 330
            +SPS  YSP+ PGYSPSST  Q++P+  D
Sbjct: 102 NYSPSGSYSPTAPGYSPSSTGQQFSPQAAD 131

[23][TOP]
>UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
            RepID=B9FZ51_ORYSJ
          Length = 1526

 Score =  119 bits (299), Expect = 1e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1326 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1385

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ PGYSP+S S Y+P
Sbjct: 1386 SPAYSPTSPGYSPTSPS-YSP 1405

 Score =  119 bits (299), Expect = 1e-25
 Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 7/90 (7%)
 Frame = -2

Query: 578  FSPSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY--NSGTSPDYSPSSP 417
            +SPSSP    YS TSP+YSPTSP+YSPTSPSYS  SP+YSP+SPY  + G SPDYSP+SP
Sbjct: 1430 YSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSP 1489

Query: 416  QFSPSTGYSPSQPGYSPSST-SQYTPKTND 330
             +SPS  YSP+ PGYSPSST  Q++P+  D
Sbjct: 1490 NYSPSGSYSPTAPGYSPSSTGQQFSPQAAD 1519

 Score =  116 bits (291), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1277 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPT 1336

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1337 SPSYSPTSPSYSPTSPS-YSP 1356

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1347 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1406

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P Y+PSS ++Y+P
Sbjct: 1407 SPNYSPTSPSYNPSS-AKYSP 1426

 Score =  114 bits (285), Expect = 5e-24
 Identities = 55/80 (68%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +SP   YSPTSPSYSP SPSYSPTSPSY+P SPTYSP+SP  S TSP YSP+SP +SP S
Sbjct: 1229 YSPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTS 1288

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1289 PSYSPTSPSYSPTSPS-YSP 1307

 Score =  114 bits (284), Expect = 7e-24
 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1312 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1371

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1372 SPSYSPTSPSYSPTSPA-YSP 1391

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1256 YTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1315

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1316 SPVYSPTSPAYSPTSPA-YSP 1335

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1298 YSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1357

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1358 SPSYSPTSPSYSPTSPS-YSP 1377

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1305 YSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1364

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1365 SPSYSPTSPSYSPTSPS-YSP 1384

 Score =  110 bits (276), Expect = 6e-23
 Identities = 54/82 (65%), Positives = 65/82 (79%), Gaps = 3/82 (3%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP  S TSP Y+PSS ++SPS
Sbjct: 1368 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPS 1427

Query: 401  TGYSPSQPGYSPSS--TSQYTP 342
              YSPS P  SP S  +  Y+P
Sbjct: 1428 HAYSPSSPRLSPYSQTSPNYSP 1449

 Score =  110 bits (274), Expect = 1e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP Y+P SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1249 YSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1308

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1309 SPSYSPTSPVYSPTSPA-YSP 1328

 Score =  107 bits (268), Expect = 5e-22
 Identities = 54/75 (72%), Positives = 64/75 (85%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP  S TSP+YSP+SP ++PS
Sbjct: 1361 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPS 1420

Query: 401  TG-YSPSQPGYSPSS 360
            +  YSPS   YSPSS
Sbjct: 1421 SAKYSPSH-AYSPSS 1434

 Score =  105 bits (263), Expect = 2e-21
 Identities = 51/80 (63%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +SPSSP     P YSPTSPSYSP SPSYSP+SP+Y+P SP  S TSP YSP+SP +SP S
Sbjct: 1222 YSPSSPVYSPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTS 1281

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1282 PSYSPTSPSYSPTSPS-YSP 1300

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
 Frame = -2

Query: 572  PSSPYSPTSPS-YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            PS  Y+P+S   YSP+SP YSP  P YSP+SP+YSP+SP  S TSP Y+P SP +SP S 
Sbjct: 1210 PSPGYTPSSGGGYSPSSPVYSP-GPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSP 1268

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1269 SYSPTSPSYSPTSPS-YSP 1286

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPT--SPSYSP-SSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            SPS   SP   +   T   +SP     ++SP  SP Y+PSS         YSPSSP +SP
Sbjct: 1178 SPSYLLSPNIRASPITDAQFSPYVGGMAFSPVPSPGYTPSS------GGGYSPSSPVYSP 1231

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
              GYSP+ P YSP+S S Y+P
Sbjct: 1232 GPGYSPTSPSYSPASPS-YSP 1251

[24][TOP]
>UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
            RepID=C4R4Y0_PICPG
          Length = 1743

 Score =  119 bits (299), Expect = 1e-25
 Identities = 59/82 (71%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP
Sbjct: 1552 RYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1611

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S  QY+P
Sbjct: 1612 TSPSYSPTSPSYSPTS-PQYSP 1632

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1588 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPT 1647

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1648 SPQYSPTSPQYSPTS-PQYSP 1667

 Score =  118 bits (295), Expect = 4e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1574 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1633

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1634 SPQYSPTSPQYSPTS-PQYSP 1653

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1560 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1619

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1620 SPSYSPTSPQYSPTS-PQYSP 1639

 Score =  115 bits (289), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            F+P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1546 FAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1605

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1606 SPSYSPTSPSYSPTSPS-YSP 1625

 Score =  114 bits (286), Expect = 4e-24
 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1609 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1668

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1669 SPQYSPTSPQYSPTS-PQYSP 1688

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP
Sbjct: 1629 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1688

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S  QY+P
Sbjct: 1689 TSPQYSPTSPQYSPTS-PQYSP 1709

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP
Sbjct: 1650 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1709

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S  QY+P
Sbjct: 1710 TSPQYSPTSPQYSPAS-PQYSP 1730

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            F+P+SP ++PTSP YSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1539 FAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1598

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1599 SPSYSPTSPSYSPTSPS-YSP 1618

 Score =  110 bits (276), Expect = 6e-23
 Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP
Sbjct: 1657 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1716

Query: 404  -STGYSPSQPGYSPSSTS 354
             S  YSP+ P YSPS  S
Sbjct: 1717 TSPQYSPASPQYSPSRHS 1734

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/80 (62%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            S +SP ++PTSP ++PTSP YSPTSP YSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1533 SATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1592

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1593 PSYSPTSPSYSPTSPS-YSP 1611

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP
Sbjct: 1671 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPASPQYSP 1730

Query: 404  STGYSPS 384
            S  +SP+
Sbjct: 1731 SR-HSPN 1736

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390
            SPY PTSP  S TSP ++PTSP ++P+SP YSP+SP  S TSP YSP+SP +SP S  YS
Sbjct: 1523 SPYQPTSPGLSATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYS 1582

Query: 389  PSQPGYSPSSTSQYTP 342
            P+ P YSP+S S Y+P
Sbjct: 1583 PTSPSYSPTSPS-YSP 1597

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSPS    +G S +
Sbjct: 1692 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPASPQYSPSRHSPNGESKE 1741

[25][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
            RepID=A5E6J4_LODEL
          Length = 1745

 Score =  119 bits (298), Expect = 2e-25
 Identities = 60/88 (68%), Positives = 68/88 (77%), Gaps = 2/88 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1659 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPT 1718

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKD 321
            S  YSP  P YSP S  +Y PK+   KD
Sbjct: 1719 SPQYSPRSPNYSPKS-PEYKPKSPSKKD 1745

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1631 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1690

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1691 SPQYSPTSPSYSPTSPS-YSP 1710

 Score =  118 bits (296), Expect = 3e-25
 Identities = 58/83 (69%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1645 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPT 1704

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSP+S  QY+P++
Sbjct: 1705 SPSYSPTSPQYSPTS-PQYSPRS 1726

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1554 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1613

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1614 SPSYSPTSPSYSPTSPS-YSP 1633

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1575 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1634

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1635 SPSYSPTSPSYSPTSPS-YSP 1654

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1596 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1655

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1656 SPSYSPTSPSYSPTSPS-YSP 1675

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1617 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1676

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1677 SPSYSPTSPQYSPTS-PQYSP 1696

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            SP   YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1535 SPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1594

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1595 SYSPTSPSYSPTSPS-YSP 1612

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 43/79 (54%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
 Frame = -2

Query: 569  SSPYS-PTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP+S  T+P Y  TSP Y  TSP Y  SP+SP+YSP+SP  S TSP YSP+SP      
Sbjct: 1513 TSPFSYGTTPGYGGTSPGYGGTSPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPS----- 1567

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1568 -YSPTSPSYSPTSPS-YSP 1584

[26][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B2C
          Length = 1888

 Score =  119 bits (297), Expect = 2e-25
 Identities = 59/83 (71%), Positives = 69/83 (83%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736

Query: 404  STGYSPSQPGYSPSS--TSQYTP 342
            S  YSP+ P YSPSS  + +YTP
Sbjct: 1737 SPSYSPTSPNYSPSSPTSPKYTP 1759

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S S      N +   P
Sbjct: 1723 SPSYSPTSPSYSPTSPSYSPTSPNYSPSSP 1752

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1716 SPSYSPTSPSYSPTSPS-YSP 1735

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/84 (69%), Positives = 69/84 (82%), Gaps = 5/84 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1750

Query: 401  T----GYSPSQPGYSPSSTSQYTP 342
            +     Y+P+ P YSPSS  +YTP
Sbjct: 1751 SPTSPKYTPTSPSYSPSS-PEYTP 1773

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686

 Score =  110 bits (276), Expect = 6e-23
 Identities = 57/84 (67%), Positives = 69/84 (82%), Gaps = 5/84 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN---SGTSPDYSPSSPQF 411
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPSSP +   + TSP YSPSSP++
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEY 1771

Query: 410  SP-STGYSPSQPGYSPSSTSQYTP 342
            +P S  YSP+ P YSP+S  +Y+P
Sbjct: 1772 TPTSPKYSPTSPKYSPTS-PKYSP 1794

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1777 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1836

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1837 TSPKYSPTSPTYSPTSPKGSTYSP 1860

 Score =  108 bits (270), Expect = 3e-22
 Identities = 55/84 (65%), Positives = 70/84 (83%), Gaps = 5/84 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY---NSGTSPDYSPSSPQF 411
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP    +S TSP Y+P+SP +
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSY 1764

Query: 410  SPST-GYSPSQPGYSPSSTSQYTP 342
            SPS+  Y+P+ P YSP+S  +Y+P
Sbjct: 1765 SPSSPEYTPTSPKYSPTS-PKYSP 1787

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1764 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1823

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1824 SPKYSPTSPTYSPTS-PKYSP 1843

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1791 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1850

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1851 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1883

 Score =  105 bits (263), Expect = 2e-21
 Identities = 54/84 (64%), Positives = 68/84 (80%), Gaps = 5/84 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            +SP+SP YSPTSPSYSPTSP+Y   SPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++
Sbjct: 1726 YSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKY 1785

Query: 410  SP-STGYSPSQPGYSPSSTSQYTP 342
            SP S  YSP+ P YSP +T +Y+P
Sbjct: 1786 SPTSPKYSPTSPTYSP-TTPKYSP 1808

 Score =  104 bits (259), Expect = 6e-21
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 5/84 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            +SP+SP YSPTSP+YSP   TSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++
Sbjct: 1733 YSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKY 1792

Query: 410  SP-STGYSPSQPGYSPSSTSQYTP 342
            SP S  YSP+ P YSP+S + Y+P
Sbjct: 1793 SPTSPTYSPTTPKYSPTSPT-YSP 1815

 Score =  104 bits (259), Expect = 6e-21
 Identities = 51/84 (60%), Positives = 66/84 (78%), Gaps = 5/84 (5%)
 Frame = -2

Query: 578  FSPSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            +SPSSP    Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP  S TSP YSP++P++
Sbjct: 1747 YSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1806

Query: 410  SP-STGYSPSQPGYSPSSTSQYTP 342
            SP S  YSP+ P Y+P+S  +Y+P
Sbjct: 1807 SPTSPTYSPTSPVYTPTS-PKYSP 1829

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1805 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1864

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1865 YSPTSPTYSLTSPAISPDDSDE 1886

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1545 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1597

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1598 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1623

[27][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
            RepID=B3RM26_TRIAD
          Length = 1784

 Score =  119 bits (297), Expect = 2e-25
 Identities = 59/82 (71%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP++SP
Sbjct: 1682 RYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSP 1741

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1742 TSPSYSPTSPRYSPTSPS-YSP 1762

 Score =  116 bits (291), Expect = 1e-24
 Identities = 58/82 (70%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP
Sbjct: 1633 RYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSP 1692

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1693 TSPSYSPTSPSYSPTSPS-YSP 1713

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/82 (69%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP
Sbjct: 1675 KYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSP 1734

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S  +Y+P
Sbjct: 1735 TSPRYSPTSPSYSPTS-PRYSP 1755

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/82 (69%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R+SP+SP YSPTSPSYSPTSP YSPTSP YSP+SP+YSP+SP  S TSP YSP+SP +SP
Sbjct: 1654 RYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1713

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1714 TSPSYSPTSPRYSPTSPS-YSP 1734

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP++SP 
Sbjct: 1669 YSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPT 1728

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1729 SPSYSPTSPRYSPTSPS-YSP 1748

 Score =  114 bits (284), Expect = 7e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP++SP 
Sbjct: 1599 YSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPT 1658

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1659 SPSYSPTSPSYSPTS-PKYSP 1678

 Score =  114 bits (284), Expect = 7e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1613 YSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPT 1672

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1673 SPKYSPTSPRYSPTSPS-YSP 1692

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/82 (68%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP  S TSP YSP+SP +SP
Sbjct: 1591 KYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSP 1650

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1651 TSPRYSPTSPSYSPTSPS-YSP 1671

 Score =  112 bits (280), Expect = 2e-23
 Identities = 56/81 (69%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1704 YSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPT 1763

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S   Y+P
Sbjct: 1764 SPSYSPTSPSYSPTS-PDYSP 1783

 Score =  108 bits (271), Expect = 2e-22
 Identities = 54/76 (71%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390
            S YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP S  YS
Sbjct: 1590 SKYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYS 1649

Query: 389  PSQPGYSPSSTSQYTP 342
            P+ P YSP+S S Y+P
Sbjct: 1650 PTSPRYSPTSPS-YSP 1664

 Score =  102 bits (253), Expect = 3e-20
 Identities = 50/73 (68%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP     
Sbjct: 1718 YSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSP----- 1772

Query: 401  TGYSPSQPGYSPS 363
              YSP+ P YSP+
Sbjct: 1773 -SYSPTSPDYSPN 1784

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 46/98 (46%), Positives = 55/98 (56%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPY--SPTSPSYSPTSPS---------------YSPTSPSYS---PSSPTYSPSSPYN 453
            PSSPY  SPT  ++     S               YSPTSP      P+SP YSP+SP  
Sbjct: 1557 PSSPYMQSPTDITFYVAFQSIILTVESKLLTDFSKYSPTSP---SYSPTSPRYSPTSPSY 1613

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1614 SPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPS-YSP 1650

[28][TOP]
>UniRef100_C4Y5N3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
           42720 RepID=C4Y5N3_CLAL4
          Length = 281

 Score =  119 bits (297), Expect = 2e-25
 Identities = 61/87 (70%), Positives = 68/87 (78%), Gaps = 2/87 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 195 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 254

Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNK 324
           S  YSP  P YSP S S Y  K  D K
Sbjct: 255 SPQYSPGSPSYSPRSPS-YGDKKEDEK 280

 Score =  118 bits (296), Expect = 3e-25
 Identities = 61/92 (66%), Positives = 73/92 (79%), Gaps = 5/92 (5%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 188 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 247

Query: 404 STGYSPSQPGYSPSSTSQYTPKT---NDNKDD 318
           S  YSP+ P YSP S S Y+P++    D K+D
Sbjct: 248 SPQYSPTSPQYSPGSPS-YSPRSPSYGDKKED 278

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 97  YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 156

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 157 SPSYSPTSPSYSPTSPS-YSP 176

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 118 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 177

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 178 SPSYSPTSPSYSPTSPS-YSP 197

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 139 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 198

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 199 SPSYSPTSPSYSPTSPS-YSP 218

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 160 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 219

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 220 SPSYSPTSPSYSPTSPS-YSP 239

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 181 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 240

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S  QY+P
Sbjct: 241 SPSYSPTSPQYSPTS-PQYSP 260

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
           S  YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 80  SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 139

Query: 392 SPSQPGYSPSSTSQYTP 342
           SP+ P YSP+S S Y+P
Sbjct: 140 SPTSPSYSPTSPS-YSP 155

 Score =  106 bits (264), Expect = 1e-21
 Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
           S  Y  TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 73  SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 132

Query: 392 SPSQPGYSPSSTSQYTP 342
           SP+ P YSP+S S Y+P
Sbjct: 133 SPTSPSYSPTSPS-YSP 148

 Score =  100 bits (249), Expect = 8e-20
 Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 11/89 (12%)
 Frame = -2

Query: 575 SPSSPYS----------PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
           SP+SP+S           TSP Y  TSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP
Sbjct: 54  SPTSPFSYGGASPAFGGATSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 113

Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           +SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 114 TSPSYSPTSPSYSPTSPSYSPTSPS-YSP 141

[29][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
            RepID=B9WN64_CANDC
          Length = 1735

 Score =  119 bits (297), Expect = 2e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1620 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1679

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1680 SPSYSPTSPQYSPTSPS-YSP 1699

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1693

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1694 SPSYSPTSPQYSPTS-PQYSP 1713

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1578 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPT 1637

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1638 SPSYSPTSPSYSPTSPS-YSP 1657

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1665

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1666 SPSYSPTSPQYSPTSPS-YSP 1685

 Score =  116 bits (291), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1571 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPT 1630

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1659 SPQYSPTSPSYSPTS-PQYSP 1678

 Score =  115 bits (287), Expect = 3e-24
 Identities = 56/89 (62%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            SP   YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1538 SPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1597

Query: 398  GYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
             YSP+ P YSP+S S      + +   PG
Sbjct: 1598 SYSPTSPSYSPTSPSYSPTSPSYSPTSPG 1626

 Score =  114 bits (286), Expect = 4e-24
 Identities = 57/83 (68%), Positives = 66/83 (79%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1648 YSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1707

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSP S   Y PK+
Sbjct: 1708 SPQYSPTSPRYSPGSPG-YEPKS 1729

 Score =  112 bits (280), Expect = 2e-23
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPT 1700

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1701 SPQYSPTSPQYSPTS-PRYSP 1720

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  Y+     YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1533 SPGYASPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1592

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1593 SPTSPSYSPTSPS-YSP 1608

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
 Frame = -2

Query: 569  SSPYS-----PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +SP+S      TSP Y+     YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP
Sbjct: 1521 TSPFSFGYNTATSPGYASPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1580

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1581 TSPSYSPTSPSYSPTSPS-YSP 1601

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/57 (70%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            ++SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP YSP+SP  S  SP Y P SP+
Sbjct: 1675 QYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPRYSPGSPGYEPKSPK 1731

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 6/74 (8%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYS----PSSPTYSPSSPYNSGTSPDYSPSSP 417
            ++SP+SP YSPTSP YSPTSPSYSPTSP YS        +YSP+SP  S TSP YSP+SP
Sbjct: 1661 QYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSP----SYSPTSPQYSPTSPQYSPTSP 1716

Query: 416  QFSP-STGYSPSQP 378
            ++SP S GY P  P
Sbjct: 1717 RYSPGSPGYEPKSP 1730

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 44/73 (60%), Positives = 49/73 (67%), Gaps = 5/73 (6%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS----PSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            +SP+SP YSPTSPSYSPTSP YSPTSPSYS         YSP+SP  S TSP YSP SP 
Sbjct: 1669 YSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSP----QYSPTSPQYSPTSPRYSPGSPG 1724

Query: 413  FSPSTGYSPSQPG 375
            + P    SP + G
Sbjct: 1725 YEPK---SPKKDG 1734

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG 447
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP SP Y P SP   G
Sbjct: 1689 QYSPTSPSYSPTSPQYSPTSPQYSPTSPRYSPGSPGYEPKSPKKDG 1734

[30][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 1 n=1 Tax=Strongylocentrotus purpuratus
            RepID=UPI0000E48673
          Length = 1880

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSPSSP++SP 
Sbjct: 1668 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPT 1727

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP S S Y+P
Sbjct: 1728 SPSYSPTSPSYSPQSPS-YSP 1747

 Score =  118 bits (295), Expect = 4e-25
 Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1720

Query: 401  T-GYSPSQPGYSPSSTSQYTPKT 336
            +  YSP+ P YSP+S S Y+P++
Sbjct: 1721 SPKYSPTSPSYSPTSPS-YSPQS 1742

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1584 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1643

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1644 SPSYSPTSPSYSPTSPS-YSP 1663

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1664

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1665 SPSYSPTSPSYSPTSPS-YSP 1684

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1685

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1686 SPSYSPTSPSYSPTSPS-YSP 1705

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1647 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1706

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPSS  +Y+P
Sbjct: 1707 SPSYSPTSPSYSPSS-PKYSP 1726

 Score =  117 bits (292), Expect = 8e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSPSYSPTSPSYSPTSP++SPSSPTYSP+SP  S TSP YSPSSP++SP 
Sbjct: 1752 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPT 1811

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1812 SPTYSPTSPKYSPASPT-YSP 1831

 Score =  115 bits (289), Expect = 2e-24
 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSPSYSPTSPSYSP SPSYSP SP+YSPSSP  S TSP YSP+SP +SP 
Sbjct: 1717 YSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPT 1776

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  +SPS P YSP+S S Y+P
Sbjct: 1777 SPNFSPSSPTYSPASPS-YSP 1796

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S +SP YSP+SP +SP 
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPT 1734

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP  P YSP S S Y+P +
Sbjct: 1735 SPSYSPQSPSYSPGSPS-YSPSS 1756

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            SPS  YSPTSPSYSPTSP YSP SPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1565 SPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1624

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1625 SYSPTSPSYSPTSPS-YSP 1642

 Score =  110 bits (276), Expect = 6e-23
 Identities = 56/92 (60%), Positives = 69/92 (75%), Gaps = 5/92 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP  S TSP YSPSSP +SP+
Sbjct: 1787 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1846

Query: 401  ----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
                + YSP+ P YSP+S S Y+P +    DD
Sbjct: 1847 SPKGSTYSPTSPSYSPTSPS-YSPTSPGMGDD 1877

 Score =  110 bits (275), Expect = 8e-23
 Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSP+SP YSPTSPSYSP+SP+YSP SP  S  SP YSPSSP++SP 
Sbjct: 1703 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1762

Query: 404  STGYSPSQPGYSPSS 360
            S  YSP+ P YSP+S
Sbjct: 1763 SPSYSPTSPSYSPTS 1777

 Score =  109 bits (273), Expect = 1e-22
 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP  S  SP YSP+SP++SPS
Sbjct: 1745 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPS 1804

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            +  YSP+ P YSP+S  +Y+P
Sbjct: 1805 SPKYSPTSPTYSPTS-PKYSP 1824

 Score =  108 bits (269), Expect = 4e-22
 Identities = 55/83 (66%), Positives = 65/83 (78%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP +SP+SP+YSP SPSYSPTSP YSPSSP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1773 YSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPT 1832

Query: 404  STGYSPSQPGYSPSST--SQYTP 342
            S  YSPS P YSP+S   S Y+P
Sbjct: 1833 SPKYSPSSPTYSPTSPKGSTYSP 1855

 Score =  107 bits (267), Expect = 7e-22
 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP SP YSP SPSYSP+SP YSPTSPSYSP+SP+YSP+SP  S +SP YSP+SP +SP 
Sbjct: 1738 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPT 1797

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSPS P YSP+S + Y+P
Sbjct: 1798 SPKYSPSSPKYSPTSPT-YSP 1817

 Score =  100 bits (250), Expect = 6e-20
 Identities = 55/97 (56%), Positives = 66/97 (68%), Gaps = 9/97 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSPTSPSYSP+SP YSP+SP+YSP+SP  S  SP YSP 
Sbjct: 1689 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPG 1748

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP +SPS+  YSP+ P YSP+S S      N +   P
Sbjct: 1749 SPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSP 1785

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 49/82 (59%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
 Frame = -2

Query: 578  FSP--SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            FSP  S  +SP   S    SP YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1548 FSPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSP 1607

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1608 TSPSYSPTSPSYSPTSPS-YSP 1628

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPTSPSYSP--SSPTYSPSSPYN--SGTSPDYSPSSPQFSP-S 402
            S  +P  P +SP +   +  SP+YSP  S    SP SP    S TSP YSP+SP +SP S
Sbjct: 1529 SGMTPGGPGFSPANSESTGFSPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPAS 1588

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 4/38 (10%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSP---SYSPTSPSYSPTSPSYSPSSP 480
            ++SPSSP YSPTSP   +YSPTSPSYSPTSPSYSP+SP
Sbjct: 1835 KYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTSP 1872

[31][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 2 n=1 Tax=Strongylocentrotus purpuratus
            RepID=UPI0000E48672
          Length = 1913

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSPSSP++SP 
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPT 1760

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP S S Y+P
Sbjct: 1761 SPSYSPTSPSYSPQSPS-YSP 1780

 Score =  118 bits (295), Expect = 4e-25
 Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1694 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1753

Query: 401  T-GYSPSQPGYSPSSTSQYTPKT 336
            +  YSP+ P YSP+S S Y+P++
Sbjct: 1754 SPKYSPTSPSYSPTSPS-YSPQS 1775

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1617 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1676

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1677 SPSYSPTSPSYSPTSPS-YSP 1696

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1697

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1698 SPSYSPTSPSYSPTSPS-YSP 1717

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1659 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1718

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1719 SPSYSPTSPSYSPTSPS-YSP 1738

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1680 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1739

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPSS  +Y+P
Sbjct: 1740 SPSYSPTSPSYSPSS-PKYSP 1759

 Score =  117 bits (292), Expect = 8e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSPSYSPTSPSYSPTSP++SPSSPTYSP+SP  S TSP YSPSSP++SP 
Sbjct: 1785 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPT 1844

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1845 SPTYSPTSPKYSPASPT-YSP 1864

 Score =  115 bits (289), Expect = 2e-24
 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSPSYSPTSPSYSP SPSYSP SP+YSPSSP  S TSP YSP+SP +SP 
Sbjct: 1750 YSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPT 1809

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  +SPS P YSP+S S Y+P
Sbjct: 1810 SPNFSPSSPTYSPASPS-YSP 1829

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1610 YSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1669

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1670 SPSYSPTSPSYSPTSPS-YSP 1689

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S +SP YSP+SP +SP 
Sbjct: 1708 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPT 1767

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP  P YSP S S Y+P +
Sbjct: 1768 SPSYSPQSPSYSPGSPS-YSPSS 1789

 Score =  110 bits (276), Expect = 6e-23
 Identities = 56/92 (60%), Positives = 69/92 (75%), Gaps = 5/92 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP  S TSP YSPSSP +SP+
Sbjct: 1820 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1879

Query: 401  ----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
                + YSP+ P YSP+S S Y+P +    DD
Sbjct: 1880 SPKGSTYSPTSPSYSPTSPS-YSPTSPGMGDD 1910

 Score =  110 bits (275), Expect = 8e-23
 Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSP+SP YSPTSPSYSP+SP+YSP SP  S  SP YSPSSP++SP 
Sbjct: 1736 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1795

Query: 404  STGYSPSQPGYSPSS 360
            S  YSP+ P YSP+S
Sbjct: 1796 SPSYSPTSPSYSPTS 1810

 Score =  109 bits (273), Expect = 1e-22
 Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            + P+SP +P SP YSPTSPSYSPTSP YSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1590 YLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1649

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1650 PSYSPTSPSYSPTSPS-YSP 1668

 Score =  109 bits (273), Expect = 1e-22
 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP  S  SP YSP+SP++SPS
Sbjct: 1778 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPS 1837

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            +  YSP+ P YSP+S  +Y+P
Sbjct: 1838 SPKYSPTSPTYSPTS-PKYSP 1857

 Score =  108 bits (269), Expect = 4e-22
 Identities = 55/83 (66%), Positives = 65/83 (78%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP +SP+SP+YSP SPSYSPTSP YSPSSP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1806 YSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPT 1865

Query: 404  STGYSPSQPGYSPSST--SQYTP 342
            S  YSPS P YSP+S   S Y+P
Sbjct: 1866 SPKYSPSSPTYSPTSPKGSTYSP 1888

 Score =  107 bits (267), Expect = 7e-22
 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP SP YSP SPSYSP+SP YSPTSPSYSP+SP+YSP+SP  S +SP YSP+SP +SP 
Sbjct: 1771 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPT 1830

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSPS P YSP+S + Y+P
Sbjct: 1831 SPKYSPSSPKYSPTSPT-YSP 1850

 Score =  100 bits (250), Expect = 6e-20
 Identities = 55/97 (56%), Positives = 66/97 (68%), Gaps = 9/97 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSPTSPSYSP+SP YSP+SP+YSP+SP  S  SP YSP 
Sbjct: 1722 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPG 1781

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP +SPS+  YSP+ P YSP+S S      N +   P
Sbjct: 1782 SPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSP 1818

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 53/85 (62%), Positives = 61/85 (71%), Gaps = 8/85 (9%)
 Frame = -2

Query: 572  PSSP-YSPTSPSY------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            P SP YSP SPSY      +P SP YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP 
Sbjct: 1578 PMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS 1637

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPS-YSP 1661

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPTSPSYS-PTSPSYSPSSPTY---SPSSPYNSG---TSPDYS 429
            +SP+    P SP SP+ SP  PS + P SPSYSP+SP+Y   SP++P + G   TSP YS
Sbjct: 1552 YSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYS 1611

Query: 428  PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1612 PTSPGYSPASPSYSPTSPSYSPTSPS-YSP 1640

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 48/90 (53%), Positives = 59/90 (65%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSPYSPT-SPS-YSPTSPSYS--------PTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            FSP+  YSP  SP   SP SP+ S        P SPSYSP+SP+Y P+SP  +  SP YS
Sbjct: 1548 FSPA--YSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASP-ATPQSPGYS 1604

Query: 428  PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P+SP +SP S GYSP+ P YSP+S S Y+P
Sbjct: 1605 PTSPSYSPTSPGYSPASPSYSPTSPS-YSP 1633

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 4/38 (10%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSP---SYSPTSPSYSPTSPSYSPSSP 480
            ++SPSSP YSPTSP   +YSPTSPSYSPTSPSYSP+SP
Sbjct: 1868 KYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTSP 1905

[32][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 3 n=1 Tax=Strongylocentrotus purpuratus
            RepID=UPI0000E48671
          Length = 1921

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSPSSP++SP 
Sbjct: 1709 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPT 1768

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP S S Y+P
Sbjct: 1769 SPSYSPTSPSYSPQSPS-YSP 1788

 Score =  118 bits (295), Expect = 4e-25
 Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1702 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1761

Query: 401  T-GYSPSQPGYSPSSTSQYTPKT 336
            +  YSP+ P YSP+S S Y+P++
Sbjct: 1762 SPKYSPTSPSYSPTSPS-YSPQS 1783

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1625 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1685 SPSYSPTSPSYSPTSPS-YSP 1704

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1706 SPSYSPTSPSYSPTSPS-YSP 1725

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1726

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1727 SPSYSPTSPSYSPTSPS-YSP 1746

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1747

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPSS  +Y+P
Sbjct: 1748 SPSYSPTSPSYSPSS-PKYSP 1767

 Score =  117 bits (292), Expect = 8e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSPSYSPTSPSYSPTSP++SPSSPTYSP+SP  S TSP YSPSSP++SP 
Sbjct: 1793 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPT 1852

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1853 SPTYSPTSPKYSPASPT-YSP 1872

 Score =  115 bits (289), Expect = 2e-24
 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSPSYSPTSPSYSP SPSYSP SP+YSPSSP  S TSP YSP+SP +SP 
Sbjct: 1758 YSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPT 1817

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  +SPS P YSP+S S Y+P
Sbjct: 1818 SPNFSPSSPTYSPASPS-YSP 1837

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1618 YSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1677

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1678 SPSYSPTSPSYSPTSPS-YSP 1697

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S +SP YSP+SP +SP 
Sbjct: 1716 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPT 1775

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP  P YSP S S Y+P +
Sbjct: 1776 SPSYSPQSPSYSPGSPS-YSPSS 1797

 Score =  110 bits (276), Expect = 6e-23
 Identities = 56/92 (60%), Positives = 69/92 (75%), Gaps = 5/92 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP  S TSP YSPSSP +SP+
Sbjct: 1828 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1887

Query: 401  ----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
                + YSP+ P YSP+S S Y+P +    DD
Sbjct: 1888 SPKGSTYSPTSPSYSPTSPS-YSPTSPGMGDD 1918

 Score =  110 bits (275), Expect = 8e-23
 Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSP+SP YSPTSPSYSP+SP+YSP SP  S  SP YSPSSP++SP 
Sbjct: 1744 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1803

Query: 404  STGYSPSQPGYSPSS 360
            S  YSP+ P YSP+S
Sbjct: 1804 SPSYSPTSPSYSPTS 1818

 Score =  109 bits (273), Expect = 1e-22
 Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            + P+SP +P SP YSPTSPSYSPTSP YSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1598 YLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1657

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1658 PSYSPTSPSYSPTSPS-YSP 1676

 Score =  109 bits (273), Expect = 1e-22
 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP  S  SP YSP+SP++SPS
Sbjct: 1786 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPS 1845

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            +  YSP+ P YSP+S  +Y+P
Sbjct: 1846 SPKYSPTSPTYSPTS-PKYSP 1865

 Score =  108 bits (269), Expect = 4e-22
 Identities = 55/83 (66%), Positives = 65/83 (78%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP +SP+SP+YSP SPSYSPTSP YSPSSP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1814 YSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPT 1873

Query: 404  STGYSPSQPGYSPSST--SQYTP 342
            S  YSPS P YSP+S   S Y+P
Sbjct: 1874 SPKYSPSSPTYSPTSPKGSTYSP 1896

 Score =  107 bits (267), Expect = 7e-22
 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP SP YSP SPSYSP+SP YSPTSPSYSP+SP+YSP+SP  S +SP YSP+SP +SP 
Sbjct: 1779 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPT 1838

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSPS P YSP+S + Y+P
Sbjct: 1839 SPKYSPSSPKYSPTSPT-YSP 1858

 Score =  100 bits (250), Expect = 6e-20
 Identities = 55/97 (56%), Positives = 66/97 (68%), Gaps = 9/97 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSPTSPSYSP+SP YSP+SP+YSP+SP  S  SP YSP 
Sbjct: 1730 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPG 1789

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP +SPS+  YSP+ P YSP+S S      N +   P
Sbjct: 1790 SPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSP 1826

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 53/85 (62%), Positives = 61/85 (71%), Gaps = 8/85 (9%)
 Frame = -2

Query: 572  PSSP-YSPTSPSY------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            P SP YSP SPSY      +P SP YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP 
Sbjct: 1586 PMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS 1645

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPS-YSP 1669

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPTSPSYS-PTSPSYSPSSPTY---SPSSPYNSG---TSPDYS 429
            +SP+    P SP SP+ SP  PS + P SPSYSP+SP+Y   SP++P + G   TSP YS
Sbjct: 1560 YSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYS 1619

Query: 428  PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1620 PTSPGYSPASPSYSPTSPSYSPTSPS-YSP 1648

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 48/90 (53%), Positives = 59/90 (65%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSPYSPT-SPS-YSPTSPSYS--------PTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            FSP+  YSP  SP   SP SP+ S        P SPSYSP+SP+Y P+SP  +  SP YS
Sbjct: 1556 FSPA--YSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASP-ATPQSPGYS 1612

Query: 428  PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P+SP +SP S GYSP+ P YSP+S S Y+P
Sbjct: 1613 PTSPSYSPTSPGYSPASPSYSPTSPS-YSP 1641

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 4/38 (10%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSP---SYSPTSPSYSPTSPSYSPSSP 480
            ++SPSSP YSPTSP   +YSPTSPSYSPTSPSYSP+SP
Sbjct: 1876 KYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTSP 1913

[33][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
            RepID=UPI0000D5670C
          Length = 2007

 Score =  118 bits (296), Expect = 3e-25
 Identities = 60/81 (74%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P+SP  S TSP YSPSSPQ+SP 
Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPA 1770

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  +SPS P YSP+S S Y+P
Sbjct: 1771 SPSFSPSSPKYSPTSPS-YSP 1790

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1721

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSP+S S Y+P +
Sbjct: 1722 SPSYSPTSPSYSPTSPS-YSPSS 1743

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1613 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1673 SPSYSPTSPSYSPTSPS-YSP 1692

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1679

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1680 SPSYSPTSPSYSPTSPS-YSP 1699

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1701 SPSYSPTSPSYSPTSPS-YSP 1720

 Score =  117 bits (292), Expect = 8e-25
 Identities = 59/88 (67%), Positives = 69/88 (78%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1742

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         YSP+ P YSPSS  QY+P
Sbjct: 1743 SPRYTPASPSYSPTSPSYSPSS-PQYSP 1769

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1606 YSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1665

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1666 SPSYSPTSPSYSPTSPS-YSP 1685

 Score =  111 bits (278), Expect = 4e-23
 Identities = 56/88 (63%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            F P+SP        YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+
Sbjct: 1592 FQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1652 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1678

 Score =  108 bits (271), Expect = 2e-22
 Identities = 49/83 (59%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP YSP SPS+SP+SP YSP+SP+YSP+SP  +G SP YSP+SP +SP 
Sbjct: 1753 YSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPT 1812

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P ++P+++S+Y+P +
Sbjct: 1813 SPNYSPSSPQHTPAASSRYSPSS 1835

 Score =  108 bits (270), Expect = 3e-22
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 3/83 (3%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP +SP+SP YSPTSPSYSPTSPS++  SP YSP+SP  S TSP+YSPSSPQ +P
Sbjct: 1766 QYSPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTP 1825

Query: 404  --STGYSPSQPGYSPSSTSQYTP 342
              S+ YSPS P YSPSS S Y+P
Sbjct: 1826 AASSRYSPSSPNYSPSSPS-YSP 1847

 Score =  105 bits (263), Expect = 2e-21
 Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP + PTSPS +P SP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1585 YSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1644

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1645 SPSYSPTSPSYSPTSPS-YSP 1664

 Score =  104 bits (260), Expect = 4e-21
 Identities = 55/95 (57%), Positives = 65/95 (68%), Gaps = 16/95 (16%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP Y+P SPSYSPTSPSYSPSSP YSP+SP  S +SP YSP+SP +SP 
Sbjct: 1732 YSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPT 1791

Query: 404  --------------STGYSPSQPGYSPSSTSQYTP 342
                          S  YSP+ P YSPSS  Q+TP
Sbjct: 1792 SPSFAGGSPQYSPTSPSYSPTSPNYSPSS-PQHTP 1825

 Score =  102 bits (255), Expect = 2e-20
 Identities = 60/96 (62%), Positives = 67/96 (69%), Gaps = 17/96 (17%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYN--------SG 447
            FSPSSP YSPTSPSYSPTSPS       YSPTSPSYSP+SP YSPSSP +        S 
Sbjct: 1774 FSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAASSRYSP 1833

Query: 446  TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP+YSPSSP +SP S  YSP    YSP+S + YTP
Sbjct: 1834 SSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPT-YTP 1868

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  YSP+SPS+ PTSPS +P SP YSP+SP YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1582 SPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 1641

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1642 SPTSPSYSPTSPS-YSP 1657

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 50/89 (56%), Positives = 59/89 (66%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
            +SPSSP         YSP+SP+YSP+SPSYSPTSP YSP S  YSP+SP  + TSP YSP
Sbjct: 1816 YSPSSPQHTPAASSRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSP 1875

Query: 425  SSPQFSPS-TGYSPSQPGYSPSSTSQYTP 342
            +SP +S     YSPS P YSP+S     P
Sbjct: 1876 ASPAYSSQPPRYSPSSPSYSPTSPITLPP 1904

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SPSSP YSPTSP YSP S  YSPTSP+Y+P+SP+YSP+SP  S   P YSPSSP +SP+
Sbjct: 1838 YSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPT 1897

Query: 401  TGYS-PSQPGYSPSSTSQYTPKTND 330
            +  + P  P YS SS S YT  + D
Sbjct: 1898 SPITLPPSPYYSRSS-STYTFSSRD 1921

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 43/80 (53%), Positives = 55/80 (68%), Gaps = 8/80 (10%)
 Frame = -2

Query: 557  SPTSPSYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +P SP+ SP        SPSYSP+SPS+ P+SP+ +P SP  S TSP YSP+SP +SP S
Sbjct: 1565 TPQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTS 1624

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1625 PSYSPTSPSYSPTSPS-YSP 1643

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 17/108 (15%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGTSP---- 438
            ++SP+SP Y+PTSPSYSP SP+YS       P+SPSYSP+SP   P SPY S +S     
Sbjct: 1858 KYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTSPITLPPSPYYSRSSSTYTF 1917

Query: 437  ---DYSPSSPQFSPSTGYSP--SQPGYSPSSTSQYTPKTNDNKDDPGT 309
               DY+ SSP +SP+       + P YSP+    +    N N+ +  T
Sbjct: 1918 SSRDYTYSSPPYSPTIPQDEMFTSPVYSPTIPKYFRSDINRNRTESPT 1965

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSY-----SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
            FSPS  S  S  SP Y     +P SP+ SP   S    SP+YSPSSP    TSP  +P S
Sbjct: 1544 FSPSAASDASGMSPGYGAWSPTPQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVS 1603

Query: 419  PQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P +SP S GYSP+ P YSP+S S Y+P
Sbjct: 1604 PGYSPTSPGYSPTSPNYSPTSPS-YSP 1629

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 16/91 (17%)
 Frame = -2

Query: 566  SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            S  +P  P++SP+        SP Y   SP+  P SP  SP      G SP YSPSSP F
Sbjct: 1535 SGMTPGGPAFSPSAASDASGMSPGYGAWSPT--PQSPAMSPFMASPHGQSPSYSPSSPSF 1592

Query: 410  SP--------STGYSPSQPGYSPSSTSQYTP 342
             P        S GYSP+ PGYSP+S + Y+P
Sbjct: 1593 QPTSPSMTPVSPGYSPTSPGYSPTSPN-YSP 1622

[34][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
            CBS767 RepID=UPI00003BD271
          Length = 1749

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1687

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1688 SPQYSPTSPSYSPTSPS-YSP 1707

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1572 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1631

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1632 SPSYSPTSPSYSPTSPS-YSP 1651

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1593 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1674 SPSYSPTSPQYSPTS-PQYSP 1693

 Score =  115 bits (289), Expect = 2e-24
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPT 1708

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1709 SPQYSPTSPQYSPTS-PQYSP 1728

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1555 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1614

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1615 SPTSPSYSPTSPS-YSP 1630

 Score =  107 bits (267), Expect = 7e-22
 Identities = 56/88 (63%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ    
Sbjct: 1670 YSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQ---- 1725

Query: 401  TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
              YSP  P YSP S S    K+ D K D
Sbjct: 1726 --YSPGSPLYSPESES----KSKDEKKD 1747

 Score =  106 bits (264), Expect = 1e-21
 Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  Y  TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1548 SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1607

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1608 SPTSPSYSPTSPS-YSP 1623

 Score =  100 bits (248), Expect = 1e-19
 Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 11/89 (12%)
 Frame = -2

Query: 575  SPSSPYS----------PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
            SP+SP+S           TSP Y  TSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP
Sbjct: 1529 SPTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1588

Query: 425  SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1589 TSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1616

[35][TOP]
>UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
            RepID=Q6CL79_KLULA
          Length = 1720

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1543 FSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1602

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1603 SPSYSPTSPSYSPTSPS-YSP 1622

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1609

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1610 SPSYSPTSPSYSPTSPS-YSP 1629

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1571 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1652 SPSYSPTSPSYSPTSPS-YSP 1671

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1673 SPSYSPTSPSYSPTSPS-YSP 1692

 Score =  111 bits (277), Expect = 5e-23
 Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP     
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP----- 1688

Query: 401  TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
              YSP+ P YSP S S   PK  ++ ++
Sbjct: 1689 -SYSPTSPQYSPGSYSPAEPKQQESDEE 1715

 Score =  110 bits (274), Expect = 1e-22
 Identities = 55/78 (70%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
 Frame = -2

Query: 569  SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
            SSP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  
Sbjct: 1539 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598

Query: 395  YSPSQPGYSPSSTSQYTP 342
            YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSPTSPS-YSP 1615

[36][TOP]
>UniRef100_O94231 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kluyveromyces
           lactis RepID=O94231_KLULA
          Length = 414

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 237 FSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 296

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 297 SPSYSPTSPSYSPTSPS-YSP 316

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 244 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 303

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 304 SPSYSPTSPSYSPTSPS-YSP 323

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 265 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 324

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 325 SPSYSPTSPSYSPTSPS-YSP 344

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 286 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 345

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 346 SPSYSPTSPSYSPTSPS-YSP 365

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 307 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 366

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 367 SPSYSPTSPSYSPTSPS-YSP 386

 Score =  111 bits (277), Expect = 5e-23
 Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP     
Sbjct: 328 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP----- 382

Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
             YSP+ P YSP S S   PK  ++ ++
Sbjct: 383 -SYSPTSPQYSPGSYSPAEPKQQESDEE 409

 Score =  110 bits (274), Expect = 1e-22
 Identities = 55/78 (70%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
 Frame = -2

Query: 569 SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
           SSP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  
Sbjct: 233 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 292

Query: 395 YSPSQPGYSPSSTSQYTP 342
           YSP+ P YSP+S S Y+P
Sbjct: 293 YSPTSPSYSPTSPS-YSP 309

[37][TOP]
>UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
            RepID=C5E245_LACTC
          Length = 1740

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1544 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1603

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1604 SPSYSPTSPSYSPTSPS-YSP 1623

 Score =  118 bits (296), Expect = 3e-25
 Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 2/89 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            S  YSP  P YSP S  +     N+N ++
Sbjct: 1709 SPSYSPGSPSYSPGSPKKENDNDNNNNNN 1737

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1565 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1624

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1625 SPSYSPTSPSYSPTSPS-YSP 1644

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1586 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1645

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1646 SPSYSPTSPSYSPTSPS-YSP 1665

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1607 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707

 Score =  109 bits (273), Expect = 1e-22
 Identities = 53/77 (68%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  +SPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1541 SPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1600

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1601 SPTSPSYSPTSPS-YSP 1616

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPT-SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
            SSP+S    +  PTSP +    SP +SP+SP YSP       TSP YSP+SP +SP S  
Sbjct: 1521 SSPFSGYGDA--PTSPGFGGVASPGFSPTSPAYSP-------TSPSYSPTSPSYSPTSPS 1571

Query: 395  YSPSQPGYSPSSTSQYTP 342
            YSP+ P YSP+S S Y+P
Sbjct: 1572 YSPTSPSYSPTSPS-YSP 1588

[38][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
            yFS275 RepID=B6JYP8_SCHJY
          Length = 1748

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1555 YSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1614

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1615 SPSYSPTSPSYSPTSPS-YSP 1634

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1576 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1635

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1636 SPSYSPTSPSYSPTSPS-YSP 1655

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1597 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1657 SPSYSPTSPSYSPTSPS-YSP 1676

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1618 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1677

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1678 SPSYSPTSPSYSPTSPS-YSP 1697

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSPSSP YSP+SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1548 FSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1607

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1608 SPSYSPTSPSYSPTSPS-YSP 1627

 Score =  111 bits (277), Expect = 5e-23
 Identities = 58/94 (61%), Positives = 68/94 (72%), Gaps = 15/94 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPG 1705

Query: 404  -------------STGYSPSQPGYSPSSTSQYTP 342
                         S  YSP+ P YSP+S S Y+P
Sbjct: 1706 HSAQNAQGRMSPRSPVYSPTSPSYSPTSPS-YSP 1738

 Score =  107 bits (267), Expect = 7e-22
 Identities = 53/78 (67%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
 Frame = -2

Query: 569  SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
            SSP +SP+SPSYSP+SP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  
Sbjct: 1544 SSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1603

Query: 395  YSPSQPGYSPSSTSQYTP 342
            YSP+ P YSP+S S Y+P
Sbjct: 1604 YSPTSPSYSPTSPS-YSP 1620

 Score =  106 bits (264), Expect = 1e-21
 Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684

Query: 404  STGYSPSQP---GYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P     SPS +  ++ +    +  P
Sbjct: 1685 SPSYSPTSPSYSPTSPSYSPGHSAQNAQGRMSP 1717

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 51/86 (59%), Positives = 58/86 (67%), Gaps = 14/86 (16%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS-------------SPYNSGTS 441
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP              SP  S TS
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGHSAQNAQGRMSPRSPVYSPTS 1726

Query: 440  PDYSPSSPQFSPSTGYSPSQPGYSPS 363
            P YSP+SP       YSP+ P YSP+
Sbjct: 1727 PSYSPTSP------SYSPTSPRYSPN 1746

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 43/70 (61%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
 Frame = -2

Query: 548  SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 372
            SP    +SP +SP+SPSYSPSSP YSP+SP  S TSP YSP+SP +SP S  YSP+ P Y
Sbjct: 1538 SPFSGASSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1597

Query: 371  SPSSTSQYTP 342
            SP+S S Y+P
Sbjct: 1598 SPTSPS-YSP 1606

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            +SPY   + S    SP    +SP +SPSSP+YSPSSP  S TSP YSP+SP +SP S  Y
Sbjct: 1524 ASPYGADARSPGYMSPFSGASSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSY 1583

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1584 SPTSPSYSPTSPS-YSP 1599

[39][TOP]
>UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
            RepID=B5RSM9_DEBHA
          Length = 1749

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1687

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1688 SPQYSPTSPSYSPTSPS-YSP 1707

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1572 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1631

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1632 SPSYSPTSPSYSPTSPS-YSP 1651

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1593 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1674 SPSYSPTSPQYSPTS-PQYSP 1693

 Score =  115 bits (289), Expect = 2e-24
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPT 1708

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1709 SPQYSPTSPQYSPTS-PQYSP 1728

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1555 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1614

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1615 SPTSPSYSPTSPS-YSP 1630

 Score =  108 bits (271), Expect = 2e-22
 Identities = 56/88 (63%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ    
Sbjct: 1670 YSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQ---- 1725

Query: 401  TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
              YSP  P YSP S S    K+ D K D
Sbjct: 1726 --YSPGSPSYSPESES----KSKDEKKD 1747

 Score =  106 bits (264), Expect = 1e-21
 Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  Y  TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1548 SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1607

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1608 SPTSPSYSPTSPS-YSP 1623

 Score =  100 bits (248), Expect = 1e-19
 Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 11/89 (12%)
 Frame = -2

Query: 575  SPSSPYS----------PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
            SP+SP+S           TSP Y  TSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP
Sbjct: 1529 SPTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1588

Query: 425  SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1589 TSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1616

[40][TOP]
>UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
            RepID=A1YIA7_ISSOR
          Length = 1647

 Score =  118 bits (296), Expect = 3e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1526 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPT 1585

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1586 SPQYSPTSPQYSPTS-PQYSP 1605

 Score =  118 bits (295), Expect = 4e-25
 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1519 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1578

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1579 SPQYSPTSPQYSPTS-PQYSP 1598

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1512 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1571

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1572 SPQYSPTSPQYSPTS-PQYSP 1591

 Score =  114 bits (286), Expect = 4e-24
 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1547 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1606

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1607 SPQYSPTSPQYSPTS-PQYSP 1626

 Score =  114 bits (284), Expect = 7e-24
 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1505 YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1564

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1565 SPQYSPTSPQYSPTS-PQYSP 1584

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1484 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1543

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1544 SPSYSPTSPSYSPTSPS-YSP 1563

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1498 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1557

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1558 SPSYSPTSPQYSPTS-PQYSP 1577

 Score =  113 bits (282), Expect = 1e-23
 Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP
Sbjct: 1567 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1626

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1627 TSPQYSPTSPQYSPTSPS-YSP 1647

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1477 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPT 1536

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1537 SPSYSPTSPSYSPTSPS-YSP 1556

 Score =  110 bits (276), Expect = 6e-23
 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            + P+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1470 YGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1529

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1530 SPSYSPTSPSYSPTSPS-YSP 1549

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            + P+SP Y PTSPSYSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1463 YGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1522

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1523 SPAYSPTSPSYSPTSPS-YSP 1542

 Score =  107 bits (266), Expect = 9e-22
 Identities = 52/77 (67%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  Y PTSPSY PTSPSYSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1460 SPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1519

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1520 SPTSPAYSPTSPS-YSP 1535

 Score =  105 bits (261), Expect = 3e-21
 Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 3/82 (3%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            + P+SP  Y  TSPSY PTSPSY PTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1448 YQPTSPFGYGATSPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1507

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S + Y+P
Sbjct: 1508 TSPAYSPTSPAYSPTSPA-YSP 1528

[41][TOP]
>UniRef100_Q99366 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
           RepID=Q99366_SOYBN
          Length = 625

 Score =  118 bits (295), Expect = 4e-25
 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 461 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 520

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S GYSP+ P YSP+S S Y+P
Sbjct: 521 SPGYSPTSPSYSPTSPS-YSP 540

 Score =  117 bits (293), Expect = 6e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 454 YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 513

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ PGYSP+S S Y+P
Sbjct: 514 SPAYSPTSPGYSPTSPS-YSP 533

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 405 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 464

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 465 SPAYSPTSPAYSPTSPS-YSP 484

 Score =  116 bits (290), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 412 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPT 471

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 472 SPAYSPTSPSYSPTSPS-YSP 491

 Score =  115 bits (289), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 433 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 492

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 493 SPSYSPTSPSYSPTSPS-YSP 512

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 475 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 534

Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
           S  YSP+ P Y+P S ++Y+P    +   P
Sbjct: 535 SPSYSPTSPSYNPQS-AKYSPSLAYSPSSP 563

 Score =  114 bits (285), Expect = 5e-24
 Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SPSSP YSPTSP YSPTSP YSPTSP+YSPSSP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 377 YSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPT 436

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 437 SPSYSPTSPSYSPTSPS-YSP 456

 Score =  114 bits (284), Expect = 7e-24
 Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SPSSP YSP+SP YSPTSP YSPTSP YSP+SPTYSPSSP  S TSP YSP+SP +SP 
Sbjct: 370 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 429

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 430 SPSYSPTSPSYSPTSPS-YSP 449

 Score =  112 bits (279), Expect = 3e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 398 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 457

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + Y+P
Sbjct: 458 SPAYSPTSPAYSPTSPA-YSP 477

 Score =  111 bits (278), Expect = 4e-23
 Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP  S TSP Y+P S ++SPS
Sbjct: 496 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 555

Query: 401 TGYSPSQPGYSPSSTSQYTP 342
             YSPS P  SPS  S Y+P
Sbjct: 556 LAYSPSSPRLSPS--SPYSP 573

 Score =  105 bits (263), Expect = 2e-21
 Identities = 59/89 (66%), Positives = 64/89 (71%), Gaps = 15/89 (16%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSY-------------SPSSPTYSPSSPYNSGTS 441
           +SP+SP YSPTSPSYSPTSPSYSPTSPSY             SPSSP  SPSSPY S TS
Sbjct: 517 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPY-SPTS 575

Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSST 357
           P+YSP+SP +SP S  YSPS P YSPS T
Sbjct: 576 PNYSPTSPSYSPTSPSYSPSSPTYSPSRT 604

 Score =  103 bits (258), Expect = 7e-21
 Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
 Frame = -2

Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           FSP+S   YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP  S +SP YSP+SP +SP
Sbjct: 362 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 421

Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 422 TSPSYSPTSPSYSPTSPS-YSP 442

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 12/90 (13%)
 Frame = -2

Query: 575 SPSSPYSPTSPS----------YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
           SP+   SPT+ +          +SPTS P YSP+SP YSPSSP YSP+SP  S TSP YS
Sbjct: 340 SPNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYS 399

Query: 428 PSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
           P+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 400 PTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 428

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 37/39 (94%), Positives = 38/39 (97%)
 Frame = -2

Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS 465
           R SPSSPYSPTSP+YSPTSPSYSPTSPSYSPSSPTYSPS
Sbjct: 564 RLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 602

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 49/89 (55%), Positives = 58/89 (65%), Gaps = 9/89 (10%)
 Frame = -2

Query: 581 RFSP---SSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPT----YSPSSPYNSGTSPDYSP 426
           +FSP      +SPTS P YSP+SP YSP+SP YS         YSP+SP  S TSP YSP
Sbjct: 352 QFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYS----PTSPGYSPTSPGYSPTSPTYSP 407

Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           SSP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 408 SSPGYSPTSPAYSPTSPSYSPTSPS-YSP 435

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/59 (61%), Positives = 42/59 (71%), Gaps = 6/59 (10%)
 Frame = -2

Query: 581 RFSPSSPYSPTSPS------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
           ++SPS  YSP+SP       YSPTSP+YSPTSPSYSP+SP+YSPS       SP YSPS
Sbjct: 551 KYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPS-------SPTYSPS 602

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 42/85 (49%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPT--SPSYSP-SSPTYSPSSPYNSG---TSPDYSPSSPQ 414
           SPS   SP       T   +SP     ++SP SSP YSPSSP   G   +SP YSP+SP 
Sbjct: 334 SPSYLLSPNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSP---GYSPSSPGYSPTSPG 390

Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342
           +SP S GYSP+ P YSPSS   Y+P
Sbjct: 391 YSPTSPGYSPTSPTYSPSSPG-YSP 414

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 39/92 (42%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
 Frame = -2

Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG------TSPDYSPSSPQFSP 405
           SP S T       SPSY   SP+   S  T +  SPY  G      +SP YSPSSP +SP
Sbjct: 321 SPISGTPYHEGLMSPSYL-LSPNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSPGYSP 379

Query: 404 ST-GYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
           S+ GYSP+ PGYSP+S          +   PG
Sbjct: 380 SSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG 411

[42][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
            RepID=Q30BD9_9EUKA
          Length = 1852

 Score =  118 bits (295), Expect = 4e-25
 Identities = 62/87 (71%), Positives = 68/87 (78%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPS SPTSPSYSPTSPSYSP+SP+YSPSSP  S  SP YSPSSP +SPS
Sbjct: 1700 YSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPS 1759

Query: 401  T-GYSPSQPGYSPSSTS------QYTP 342
            +  YSPS P YSPSS S      QYTP
Sbjct: 1760 SPSYSPSSPSYSPSSPSYSPSSPQYTP 1786

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1602 YSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPT 1661

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S GYSP+ P YSP+S S Y+P
Sbjct: 1662 SPGYSPTSPSYSPTSPS-YSP 1681

 Score =  115 bits (287), Expect = 3e-24
 Identities = 59/89 (66%), Positives = 68/89 (76%), Gaps = 9/89 (10%)
 Frame = -2

Query: 581  RFSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
            R+SP+SP        YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP
Sbjct: 1573 RYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSP 1632

Query: 425  SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1633 TSPSYSPTSPRYSPTSPSYSPTSPS-YSP 1660

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1623 YSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPT 1682

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1683 SPSYSPTSPSYSPTSPS-YSP 1702

 Score =  114 bits (286), Expect = 4e-24
 Identities = 55/77 (71%), Positives = 64/77 (83%), Gaps = 2/77 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1637 YSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1696

Query: 404  STGYSPSQPGYSPSSTS 354
            S  YSP+ P YSP+S S
Sbjct: 1697 SPSYSPTSPSYSPTSPS 1713

 Score =  114 bits (285), Expect = 5e-24
 Identities = 57/82 (69%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP
Sbjct: 1643 RYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1702

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P  SP+S S Y+P
Sbjct: 1703 TSPSYSPTSPSCSPTSPS-YSP 1723

 Score =  114 bits (284), Expect = 7e-24
 Identities = 56/77 (72%), Positives = 64/77 (83%), Gaps = 2/77 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP  SP+SP +SP 
Sbjct: 1665 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPT 1724

Query: 404  STGYSPSQPGYSPSSTS 354
            S  YSP+ P YSPSS S
Sbjct: 1725 SPSYSPTSPSYSPSSPS 1741

 Score =  114 bits (284), Expect = 7e-24
 Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1672 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPT 1731

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P  SP+S + Y+P +
Sbjct: 1732 SPSYSPSSPSCSPASPT-YSPSS 1753

 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            SP+SP YSPTSPSYSPTSPSYSP+SPS SP+SPTYSPSSP  S +SP YSPSSP +SPS+
Sbjct: 1715 SPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSS 1774

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSPS P Y+P+S + Y+P
Sbjct: 1775 PSYSPSSPQYTPAS-ANYSP 1793

 Score =  108 bits (271), Expect = 2e-22
 Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP        YSPTSP YS +SPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+
Sbjct: 1560 YSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1619

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S GYSP+ P YSP+S  +Y+P
Sbjct: 1620 SPSYSPTSPGYSPTSPSYSPTS-PRYSP 1646

 Score =  107 bits (267), Expect = 7e-22
 Identities = 61/90 (67%), Positives = 68/90 (75%), Gaps = 9/90 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP       +YSP+SP  S TSP YSPS
Sbjct: 1679 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPS 1738

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
            SP  SP S  YSPS P YSPSS S Y+P +
Sbjct: 1739 SPSCSPASPTYSPSSPSYSPSSPS-YSPSS 1767

 Score =  103 bits (258), Expect = 7e-21
 Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 13/95 (13%)
 Frame = -2

Query: 578  FSPSSPY-SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP-------- 426
            +SPSSP  SP SP+YSP+SPSYSP+SPSYSPSSP+YSPSSP  S +SP Y+P        
Sbjct: 1735 YSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPASANYSPP 1794

Query: 425  ----SSPQFSPSTGYSPSQPGYSPSSTSQYTPKTN 333
                SSP +SP++ YSP+ P Y  SS + YTP++N
Sbjct: 1795 SPLHSSPAYSPTSQYSPTSPAYGASSPA-YTPQSN 1828

 Score =  101 bits (251), Expect = 5e-20
 Identities = 51/87 (58%), Positives = 60/87 (68%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-- 405
            ++ S  YSP SPSYS  SP YSPTSP YS SSP+YSP+SP  S TSP YSP+SP +SP  
Sbjct: 1554 YAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1613

Query: 404  ------STGYSPSQPGYSPSSTSQYTP 342
                  S  YSP+ PGYSP+S S Y+P
Sbjct: 1614 PAYSPTSPSYSPTSPGYSPTSPS-YSP 1639

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 50/98 (51%), Positives = 61/98 (62%), Gaps = 9/98 (9%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSP--------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            FSP   YSP+SP YSP         SPSYSP SPSYS +SP YSP+SP  S +SP YSP+
Sbjct: 1532 FSPHRGYSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPT 1591

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            SP +SP S  YSP+ P YSP+S +      + +   PG
Sbjct: 1592 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPG 1629

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
 Frame = -2

Query: 521  SYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQY 348
            S+SP    YSPSSP YSP SP ++   SP YSP+SP +S  S  YSP+ PGYS SS S Y
Sbjct: 1531 SFSPHR-GYSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPS-Y 1588

Query: 347  TP 342
            +P
Sbjct: 1589 SP 1590

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SPSSP Y+P S +YSP SP +         SSP YSP+S Y S TSP Y  SSP ++P 
Sbjct: 1777 YSPSSPQYTPASANYSPPSPLH---------SSPAYSPTSQY-SPTSPAYGASSPAYTPQ 1826

Query: 401  TGYSP-SQPGYSPSSTSQYTP 342
            +  SP S P  + S  SQ +P
Sbjct: 1827 SNLSPASLPSPALSPVSQKSP 1847

[43][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NVN7_VITVI
          Length = 1010

 Score =  118 bits (295), Expect = 4e-25
 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 892  YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 951

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S GYSP+ P YSP+S S Y+P
Sbjct: 952  SPGYSPTSPSYSPTSPS-YSP 971

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 843  YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPT 902

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 903  SPAYSPTSPSYSPTSPS-YSP 922

 Score =  117 bits (293), Expect = 6e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 885  YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 944

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ PGYSP+S S Y+P
Sbjct: 945  SPAYSPTSPGYSPTSPS-YSP 964

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/90 (64%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 906  YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 965

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P Y+PSS ++Y+P    +   P
Sbjct: 966  SPSYSPTSPSYNPSS-AKYSPSLAYSPSSP 994

 Score =  115 bits (288), Expect = 2e-24
 Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP  S TSP YSP+SP +SP 
Sbjct: 787  YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 846

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 847  SPSYSPTSPSYSPTSPS-YSP 866

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 829  YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 888

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 889  SPSYSPTSPAYSPTSPA-YSP 908

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 822  YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 881

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 882  SPVYSPTSPSYSPTSPA-YSP 901

 Score =  114 bits (286), Expect = 4e-24
 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 864  YSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 923

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 924  SPSYSPTSPSYSPTSPS-YSP 943

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP  S TSP Y+PSS ++SPS
Sbjct: 927  YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPS 986

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSPS P  SPS  S Y+P
Sbjct: 987  LAYSPSSPRLSPS--SPYSP 1004

 Score =  112 bits (279), Expect = 3e-23
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 815  YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 874

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 875  SPSYSPTSPVYSPTSPS-YSP 894

 Score =  109 bits (273), Expect = 1e-22
 Identities = 51/75 (68%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 808  YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 867

Query: 404  STGYSPSQPGYSPSS 360
            S  YSP+ P YSP+S
Sbjct: 868  SPSYSPTSPSYSPTS 882

 Score =  105 bits (263), Expect = 2e-21
 Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            FSP+S   YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP  S TSP YSPSSP +SP
Sbjct: 772  FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 831

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 832  TSPAYSPTSPSYSPTSPS-YSP 852

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 47/70 (67%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSY+PSS  YSPS  Y S +SP  SPSSP     
Sbjct: 948  YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAY-SPSSPRLSPSSP----- 1001

Query: 401  TGYSPSQPGY 372
              YSP+ P Y
Sbjct: 1002 --YSPTSPNY 1009

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
 Frame = -2

Query: 542 SYSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369
           ++SPTS P YSP+SP YSPSSP YSP+SP  S TSP YSP+SP +SP S  YSPS PGYS
Sbjct: 771 AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 830

Query: 368 PSSTSQYTP 342
           P+S + Y+P
Sbjct: 831 PTSPA-YSP 838

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
 Frame = -2

Query: 575 SPSSPYSP-TSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQ 414
           SP+   SP T   +SP     ++SPTS      SP YSPSSP   G   +SP YSP+SP 
Sbjct: 750 SPNLRLSPITDAQFSPYVGGMAFSPTS------SPGYSPSSP---GYSPSSPGYSPTSPG 800

Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKT 336
           +SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 801 YSPTSPGYSPTSPGYSPTSPT-YSPSS 826

[44][TOP]
>UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans
            RepID=Q5ACI7_CANAL
          Length = 1728

 Score =  118 bits (295), Expect = 4e-25
 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1606 YSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPT 1665

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1666 SPSYSPTSPQYSPTSPS-YSP 1685

 Score =  118 bits (295), Expect = 4e-25
 Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1634 YSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1693

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S  QY+P +   + +P
Sbjct: 1694 SPQYSPTSPQYSPTS-PQYSPGSPGYEPEP 1722

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1599 YSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1658

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1659 SPQYSPTSPSYSPTS-PQYSP 1678

 Score =  114 bits (286), Expect = 4e-24
 Identities = 58/88 (65%), Positives = 69/88 (78%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1679

Query: 404  -------STGYSPSQPGYSPSSTSQYTP 342
                   S  YSP+ P YSP+S  QY+P
Sbjct: 1680 SPSYSPTSPQYSPTSPQYSPTS-PQYSP 1706

 Score =  114 bits (285), Expect = 5e-24
 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSY+PTSP+YSPTSPSY+P+SP YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1557 YAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPT 1616

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1617 SPSYSPTSPSYSPTSPS-YSP 1636

 Score =  114 bits (285), Expect = 5e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1651

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1652 SPSYSPTSPQYSPTSPS-YSP 1671

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1585 YAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1644

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1645 SPSYSPTSPSYSPTS-PQYSP 1664

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP Y+PTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1578 YSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPT 1637

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1638 SPAYSPTSPSYSPTSPS-YSP 1657

 Score =  110 bits (274), Expect = 1e-22
 Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            SP   YSPTSPSYSPTSPSY+PTSP+YSP+SP+Y+P+SP  S TSP Y+P+SP +SP S 
Sbjct: 1538 SPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSP 1597

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S  QY+P
Sbjct: 1598 AYSPTSPSYSPTS-PQYSP 1615

 Score =  102 bits (253), Expect = 3e-20
 Identities = 56/93 (60%), Positives = 65/93 (69%), Gaps = 9/93 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       P YSPTSPSYSPTSP YSP+SP+YSP+SP  S TSP YSP+
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPT 1700

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDN 327
            SPQ+SP S  YSP  PGY P       PK ++N
Sbjct: 1701 SPQYSPTSPQYSPGSPGYEPE-----PPKKDEN 1728

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  Y+     YSPTSPSYSPTSPSY+P+SP YSP+SP  + TSP YSP+SP ++P S  Y
Sbjct: 1533 SPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAY 1592

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1593 SPTSPAYSPTSPS-YSP 1608

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
 Frame = -2

Query: 557  SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 381
            S TSP Y+     YSPTSPSYSP+SP+Y+P+SP  S TSP Y+P+SP +SP S  Y+P+ 
Sbjct: 1530 SITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTS 1589

Query: 380  PGYSPSSTSQYTP 342
            P YSP+S + Y+P
Sbjct: 1590 PAYSPTSPA-YSP 1601

[45][TOP]
>UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans
            RepID=C4YN85_CANAL
          Length = 1742

 Score =  118 bits (295), Expect = 4e-25
 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1620 YSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPT 1679

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1680 SPSYSPTSPQYSPTSPS-YSP 1699

 Score =  118 bits (295), Expect = 4e-25
 Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1648 YSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1707

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S  QY+P +   + +P
Sbjct: 1708 SPQYSPTSPQYSPTS-PQYSPGSPGYEPEP 1736

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1613 YSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1672

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1673 SPQYSPTSPSYSPTS-PQYSP 1692

 Score =  114 bits (286), Expect = 4e-24
 Identities = 58/88 (65%), Positives = 69/88 (78%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1693

Query: 404  -------STGYSPSQPGYSPSSTSQYTP 342
                   S  YSP+ P YSP+S  QY+P
Sbjct: 1694 SPSYSPTSPQYSPTSPQYSPTS-PQYSP 1720

 Score =  114 bits (285), Expect = 5e-24
 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSY+PTSP+YSPTSPSY+P+SP YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1571 YAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPT 1630

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650

 Score =  114 bits (285), Expect = 5e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1606 YSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1665

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1666 SPSYSPTSPQYSPTSPS-YSP 1685

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1599 YAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1658

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1659 SPSYSPTSPSYSPTS-PQYSP 1678

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP Y+PTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1592 YSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPT 1651

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1652 SPAYSPTSPSYSPTSPS-YSP 1671

 Score =  109 bits (272), Expect = 2e-22
 Identities = 53/81 (65%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSY+PTSP+YSPTSPSY+P+SP YSP+SP  + TSP YSP+SP +SP 
Sbjct: 1557 YAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPT 1616

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1617 SPSYSPTSPQYSPTSPS-YSP 1636

 Score =  107 bits (267), Expect = 7e-22
 Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            SP   YSPTSPSYSPTSPSY+PTSP+YSP+SP+Y+P+SP  S TSP Y+P+SP +SP S 
Sbjct: 1538 SPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSP 1597

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             Y+P+ P YSP+S + Y+P
Sbjct: 1598 SYAPTSPAYSPTSPA-YSP 1615

 Score =  102 bits (253), Expect = 3e-20
 Identities = 56/93 (60%), Positives = 65/93 (69%), Gaps = 9/93 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       P YSPTSPSYSPTSP YSP+SP+YSP+SP  S TSP YSP+
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPT 1714

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDN 327
            SPQ+SP S  YSP  PGY P       PK ++N
Sbjct: 1715 SPQYSPTSPQYSPGSPGYEPE-----PPKKDEN 1742

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  Y+     YSPTSPSYSPTSPSY+P+SP YSP+SP  + TSP YSP+SP ++P S  Y
Sbjct: 1533 SPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAY 1592

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P Y+P+S + Y+P
Sbjct: 1593 SPTSPSYAPTSPA-YSP 1608

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/73 (57%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
 Frame = -2

Query: 557  SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 381
            S TSP Y+     YSPTSPSYSP+SP+Y+P+SP  S TSP Y+P+SP +SP S  Y+P+ 
Sbjct: 1530 SITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTS 1589

Query: 380  PGYSPSSTSQYTP 342
            P YSP+S S Y P
Sbjct: 1590 PAYSPTSPS-YAP 1601

[46][TOP]
>UniRef100_Q8SSC4 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Encephalitozoon
            cuniculi RepID=RPB1_ENCCU
          Length = 1599

 Score =  118 bits (295), Expect = 4e-25
 Identities = 59/82 (71%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP
Sbjct: 1465 RLSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1524

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1525 TSPSYSPTSPSYSPTSPS-YSP 1545

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1487 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1546

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1547 SPSYSPTSPSYSPTSPS-YSP 1566

 Score =  106 bits (265), Expect = 1e-21
 Identities = 54/87 (62%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP     
Sbjct: 1508 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP----- 1562

Query: 401  TGYSPSQPGYSPSSTSQYTPKTNDNKD 321
              YSP+ P YS S +S      + N+D
Sbjct: 1563 -SYSPTSPSYSVSMSSFSNKNKSKNQD 1588

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 49/109 (44%), Positives = 62/109 (56%), Gaps = 30/109 (27%)
 Frame = -2

Query: 578  FSPSSPYSP-----TSPSYSPTSP------------------------SYSPTSPSYSPS 486
            F P+ P +P     +S S+S +S                         SYSPTSPSYSP+
Sbjct: 1424 FKPNEPATPVISTPSSDSFSISSGNWSPTHLEMAYSRDLGERLSPTSPSYSPTSPSYSPT 1483

Query: 485  SPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP+YSP+SP  S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1484 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1531

[47][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
            (RNA polymerase II subunit B1) (DNA-directed RNA
            polymerase II subunit A) (DNA-directed RNA polymerase III
            largest subunit) n=1 Tax=Equus caballus
            RepID=UPI0001796DD3
          Length = 1834

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            S  YSP+ P YSP++ S      + +   PG
Sbjct: 1780 SPNYSPTSPSYSPTTPSYSPTSPSYSPTSPG 1810

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/81 (65%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP+YSPTSP+Y+PTSPSYSP+SP+YSP+SP  + TSP+YSP+SP +SP+
Sbjct: 1734 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPT 1793

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            T  YSP+ P YSP+S   Y+P
Sbjct: 1794 TPSYSPTSPSYSPTSPG-YSP 1813

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/89 (60%), Positives = 68/89 (76%), Gaps = 2/89 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP++P +SP 
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPT 1800

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            S  YSP+ PGYSP+S +        + DD
Sbjct: 1801 SPSYSPTSPGYSPTSPTYSLTSPAISPDD 1829

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673

 Score =  100 bits (248), Expect = 1e-19
 Identities = 47/78 (60%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSP+Y+PTSP+YSP+SP+YSP++P  S TSP YSP+SP +SP 
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSPTSPGYSPT 1814

Query: 404  STGYSPSQPGYSPSSTSQ 351
            S  YS + P  SP  + +
Sbjct: 1815 SPTYSLTSPAISPDDSDE 1832

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 52/92 (56%), Positives = 68/92 (73%), Gaps = 6/92 (6%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQ 414
            +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP     SP    T+P YSP+SP 
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP----TTPSYSPTSPS 1803

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTPKTNDNKD 321
            +SP S GYSP+ P YS +S +  +P  +D ++
Sbjct: 1804 YSPTSPGYSPTSPTYSLTSPA-ISPDDSDEEN 1834

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624

[48][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis
            domestica RepID=UPI0000F2BF13
          Length = 1932

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1700 SPSYSPTSPNYSPTSPN-YTP 1719

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1591 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1651 SPSYSPTSPSYSPTSPS-YSP 1670

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1658 SPSYSPTSPSYSPTSPS-YSP 1677

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1679 SPSYSPTSPSYSPTSPS-YSP 1698

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1685

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1686 SPSYSPTSPSYSPTSPS-YSP 1705

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1720

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1721 SPSYSPTSPSYSPTSPN-YTP 1740

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1692

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1693 SPSYSPTSPSYSPTSPN-YSP 1712

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1654 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1713

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1714 SPNYTPTSPSYSPTSPS-YSP 1733

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1570 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1741

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1742 SPNYSPTSPSYSPTSPS-YSP 1761

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 1738 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1797

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1798 SPKYTPTSPSYSPSS-PEYTP 1817

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1703 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1762

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P Y+P S + YTP +
Sbjct: 1763 SPSYSPSSPRYTPQSPT-YTPSS 1784

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1710 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1769

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         Y+PS P YSPSS S Y+P
Sbjct: 1770 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1796

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1821 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1880

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1881 TSPKYSPTSPTYSPTSPKGSTYSP 1904

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1780 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1839

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1840 SPTYSPTTPKYSPTSPT-YSP 1859

 Score =  108 bits (270), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 1772 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1831

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1832 TSPKYSPTSPTYSP-TTPKYSP 1852

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1808 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1867

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1868 SPKYSPTSPTYSPTS-PKYSP 1887

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1835 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1894

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1895 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1927

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1759 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1818

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1819 SPKYSPTSPKYSPTS-PKYSP 1838

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1800 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1859

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1860 TSPVYTPTSPKYSPTSPT-YSP 1880

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1539 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1598

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1599 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++P+SP YSPTS       P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 1717 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1776

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 1777 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1803

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+
Sbjct: 1745 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1804

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  Y+P+ P YSP+S  +Y+P
Sbjct: 1805 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1831

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1849 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1908

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1909 YSPTSPTYSLTSPAISPDDSDE 1930

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1508 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1560

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1561 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1586

[49][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Monodelphis
            domestica RepID=UPI0000F2BF12
          Length = 1970

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897

 Score =  108 bits (270), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++P+SP YSPTS       P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  Y+P+ P YSP+S  +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624

[50][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
            isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
          Length = 1970

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897

 Score =  108 bits (270), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++P+SP YSPTS       P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  Y+P+ P YSP+S  +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/54 (66%), Positives = 42/54 (77%), Gaps = 4/54 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSP---SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SP+SP YSPTSP+YSPTSP   +YSPTSP YSP+SPTYS +SP     SPD S
Sbjct: 1916 YSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISPDDS 1966

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624

[51][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 13 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B22
          Length = 1722

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1528 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1587

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S S      N +   P
Sbjct: 1588 SPSYSPTSPSYSPTSPSYSPTSPNYSPSSP 1617

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1493 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1552

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1553 SPSYSPTSPSYSPTSPS-YSP 1572

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1500 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1559

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1560 SPSYSPTSPSYSPTSPS-YSP 1579

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1521 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1580

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1581 SPSYSPTSPSYSPTSPS-YSP 1600

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1542 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPSS  +Y+P
Sbjct: 1602 SPSYSPTSPNYSPSS-PKYSP 1621

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/83 (69%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1615

Query: 401  T-GYSPSQPGYSPSSTSQYTPKT 336
            +  YSP+ P YSP+S + Y+P T
Sbjct: 1616 SPKYSPTSPKYSPTSPT-YSPTT 1637

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 70/81 (86%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSPSSP++SP 
Sbjct: 1563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPT 1622

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP +T +Y+P
Sbjct: 1623 SPKYSPTSPTYSP-TTPKYSP 1642

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1472 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1531

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1532 SPSYSPTSPSYSPTSPS-YSP 1551

 Score =  111 bits (277), Expect = 5e-23
 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPSSP YSP+SP  S TSP YSP++P++SP 
Sbjct: 1584 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1643

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P Y+P+S  +Y+P
Sbjct: 1644 SPTYSPTSPVYTPTS-PKYSP 1663

 Score =  110 bits (276), Expect = 6e-23
 Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP 
Sbjct: 1612 YSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1671

Query: 404  STGYSPSQPGYSPSST--SQYTP 342
            S  YSP+ P YSP+S   S Y+P
Sbjct: 1672 SPKYSPTSPTYSPTSPKGSTYSP 1694

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1625 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1684

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1685 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1717

 Score =  105 bits (261), Expect = 3e-21
 Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP YSPTSP YSPTSP+YSP++P YSP+SP  S TSP Y+P+SP++SP 
Sbjct: 1605 YSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1664

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1665 SPTYSPTSPKYSPTSPT-YSP 1684

 Score =  102 bits (254), Expect = 2e-20
 Identities = 55/92 (59%), Positives = 62/92 (67%), Gaps = 16/92 (17%)
 Frame = -2

Query: 569  SSPYSPTS---------------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
            S  YSPTS               PSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP 
Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1513

Query: 434  YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1544

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1639 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1698

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1699 YSPTSPTYSLTSPAISPDDSDE 1720

[52][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
            RepID=UPI0000546D90
          Length = 1972

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1741

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1742 SPSYSPTSPSYSPTSPN-YTP 1761

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1633 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1692

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1693 SPSYSPTSPSYSPTSPS-YSP 1712

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1700 SPSYSPTSPSYSPTSPS-YSP 1719

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1720

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1721 SPSYSPTSPSYSPTSPS-YSP 1740

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1734

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1735 SPSYSPTSPSYSPTSPS-YSP 1754

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+Y+P+SP +SP 
Sbjct: 1710 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPT 1769

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1770 SPSYSPTSPSYSPTSPN-YTP 1789

 Score =  116 bits (291), Expect = 1e-24
 Identities = 56/83 (67%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP+Y+PTSPSYSP+SP+YSP+SP  S TSP+Y+P+SP +SP 
Sbjct: 1738 YSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1797

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSPSS  +YTP++
Sbjct: 1798 SPSYSPTSPSYSPSS-PRYTPQS 1819

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1679 SPSYSPTSPSYSPTSPS-YSP 1698

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP ++P 
Sbjct: 1703 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPT 1762

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1763 SPSYSPTSPSYSPTSPS-YSP 1782

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1612 YTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1671

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691

 Score =  113 bits (282), Expect = 1e-23
 Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP Y+PTSPSYSPTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP+SP +SPS
Sbjct: 1752 YSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPS 1811

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         Y+PS P YSPSS S Y+P
Sbjct: 1812 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1838

 Score =  112 bits (280), Expect = 2e-23
 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP Y+PTSP+YSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 1780 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1839

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1840 SPKYTPTSPSYSPSS-PEYTP 1859

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/100 (54%), Positives = 74/100 (74%), Gaps = 12/100 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP+YSPT+P YSPTSP+YSP+SPTY+P+SP  S TSP YSP+SP++SP
Sbjct: 1870 KYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSP 1929

Query: 404  S-----------TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +           + YSP+ PGYSP+S + Y+P  + +  D
Sbjct: 1930 TSPTYSPTSPKGSTYSPTSPGYSPTSPT-YSPAISPDDSD 1968

 Score =  110 bits (274), Expect = 1e-22
 Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            SP   Y+P SP YSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1607 SPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1666

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1667 SYSPTSPSYSPTSPS-YSP 1684

 Score =  110 bits (274), Expect = 1e-22
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1863 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSP 1922

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1923 TSPKYSPTSPTYSPTSPKGSTYSP 1946

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1822 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1881

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1882 SPTYSPTTPKYSPTSPT-YSP 1901

 Score =  108 bits (270), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 1814 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1873

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1874 TSPKYSPTSPTYSP-TTPKYSP 1894

 Score =  108 bits (270), Expect = 3e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1850 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPT 1909

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1910 SPKYSPTSPTYSPTS-PKYSP 1929

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1801 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1860

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1861 SPKYSPTSPKYSPTS-PKYSP 1880

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYS       P+SP Y+P+SP  S TSP YSP+
Sbjct: 1717 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPT 1776

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S  Y+P+ P YSP+S S Y+P
Sbjct: 1777 SPSYSPTSPNYTPTSPNYSPTSPS-YSP 1803

 Score =  103 bits (256), Expect = 1e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1842 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1901

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1902 TSPTYTPTSPKYSPTSPT-YSP 1922

 Score =  102 bits (253), Expect = 3e-20
 Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPS--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP Y P SP   Y+P SP YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +S
Sbjct: 1596 YSPTSPAYEPRSPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYS 1655

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S S Y+P
Sbjct: 1656 PTSPSYSPTSPSYSPTSPS-YSP 1677

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++P+SP YSPTS       PSYSPTSP+Y+PTSP+YSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 1759 YTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQ 1818

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 1819 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1845

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 50/88 (56%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++P+SP YSPTS       PSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+
Sbjct: 1787 YTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1846

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  Y+P+ P YSP+S  +Y+P
Sbjct: 1847 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1873

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 46/90 (51%), Positives = 56/90 (62%), Gaps = 13/90 (14%)
 Frame = -2

Query: 572  PSSPYSPT-----------SPSYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDY 432
            P+SPY P+           SP+YSPTSP+Y P SP   Y+P SP YSP+SP  S TSP Y
Sbjct: 1574 PASPYIPSPGYITLHFGALSPNYSPTSPAYEPRSPGGGYTPQSPGYSPTSPSYSPTSPSY 1633

Query: 431  SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
            SP+SP       YSP+ P YSP+S S Y+P
Sbjct: 1634 SPTSPN------YSPTSPSYSPTSPS-YSP 1656

[53][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
            RepID=UPI0001B7A25C
          Length = 1968

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1680 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1739

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1740 SPSYSPTSPNYSPTSPN-YTP 1759

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1631 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1690

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1691 SPSYSPTSPSYSPTSPS-YSP 1710

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1697

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1698 SPSYSPTSPSYSPTSPS-YSP 1717

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1659 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1718

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1719 SPSYSPTSPSYSPTSPS-YSP 1738

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1666 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1725

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1726 SPSYSPTSPSYSPTSPS-YSP 1745

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1760

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1761 SPSYSPTSPSYSPTSPN-YTP 1780

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1673 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1732

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1733 SPSYSPTSPSYSPTSPN-YSP 1752

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1694 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1753

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1754 SPNYTPTSPSYSPTSPS-YSP 1773

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1610 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1669

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1670 SPSYSPTSPSYSPTSPS-YSP 1689

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1722 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1781

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1782 SPNYSPTSPSYSPTSPS-YSP 1801

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 1778 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1837

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1838 SPKYTPTSPSYSPSS-PEYTP 1857

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1743 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1802

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P Y+P S + YTP +
Sbjct: 1803 SPSYSPSSPRYTPQSPT-YTPSS 1824

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1750 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1809

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         Y+PS P YSPSS S Y+P
Sbjct: 1810 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1836

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1861 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1920

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1921 TSPKYSPTSPTYSPTSPKGSTYSP 1944

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1820 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1879

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1880 SPTYSPTTPKYSPTSPT-YSP 1899

 Score =  108 bits (270), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 1812 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1871

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1872 TSPKYSPTSPTYSP-TTPKYSP 1892

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1848 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1907

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1908 SPKYSPTSPTYSPTS-PKYSP 1927

 Score =  107 bits (266), Expect = 9e-22
 Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1875 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1934

Query: 404  S----TGYSPSQPGYSPSS 360
            +    + YSP+ PGYSP+S
Sbjct: 1935 TSPKGSTYSPTSPGYSPTS 1953

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1799 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1858

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1859 SPKYSPTSPKYSPTS-PKYSP 1878

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1840 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1899

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1900 TSPVYTPTSPKYSPTSPT-YSP 1920

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1579 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1638

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1639 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1675

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++P+SP YSPTS       P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 1757 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1816

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 1817 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1843

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+
Sbjct: 1785 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1844

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  Y+P+ P YSP+S  +Y+P
Sbjct: 1845 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1871

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1548 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1600

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1601 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1626

[54][TOP]
>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
            RepID=UPI0001B7A25B
          Length = 1932

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1700 SPSYSPTSPNYSPTSPN-YTP 1719

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1591 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1651 SPSYSPTSPSYSPTSPS-YSP 1670

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1658 SPSYSPTSPSYSPTSPS-YSP 1677

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1679 SPSYSPTSPSYSPTSPS-YSP 1698

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1685

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1686 SPSYSPTSPSYSPTSPS-YSP 1705

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1720

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1721 SPSYSPTSPSYSPTSPN-YTP 1740

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1692

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1693 SPSYSPTSPSYSPTSPN-YSP 1712

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1654 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1713

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1714 SPNYTPTSPSYSPTSPS-YSP 1733

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1570 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1741

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1742 SPNYSPTSPSYSPTSPS-YSP 1761

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 1738 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1797

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1798 SPKYTPTSPSYSPSS-PEYTP 1817

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1703 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1762

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P Y+P S + YTP +
Sbjct: 1763 SPSYSPSSPRYTPQSPT-YTPSS 1784

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1710 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1769

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         Y+PS P YSPSS S Y+P
Sbjct: 1770 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1796

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1821 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1880

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1881 TSPKYSPTSPTYSPTSPKGSTYSP 1904

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1780 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1839

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1840 SPTYSPTTPKYSPTSPT-YSP 1859

 Score =  108 bits (270), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 1772 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1831

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1832 TSPKYSPTSPTYSP-TTPKYSP 1852

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1808 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1867

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1868 SPKYSPTSPTYSPTS-PKYSP 1887

 Score =  107 bits (266), Expect = 9e-22
 Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1835 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1894

Query: 404  S----TGYSPSQPGYSPSS 360
            +    + YSP+ PGYSP+S
Sbjct: 1895 TSPKGSTYSPTSPGYSPTS 1913

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1759 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1818

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1819 SPKYSPTSPKYSPTS-PKYSP 1838

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1800 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1859

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1860 TSPVYTPTSPKYSPTSPT-YSP 1880

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1539 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1598

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1599 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++P+SP YSPTS       P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 1717 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1776

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 1777 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1803

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+
Sbjct: 1745 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1804

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  Y+P+ P YSP+S  +Y+P
Sbjct: 1805 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1831

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1849 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1908

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1909 YSPTSPTYSLTSPAISPEDSDE 1930

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1508 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1560

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1561 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1586

[55][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) n=1 Tax=Rattus norvegicus RepID=UPI0000DA33D8
          Length = 1970

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897

 Score =  108 bits (270), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925

 Score =  107 bits (266), Expect = 9e-22
 Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932

Query: 404  S----TGYSPSQPGYSPSS 360
            +    + YSP+ PGYSP+S
Sbjct: 1933 TSPKGSTYSPTSPGYSPTS 1951

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++P+SP YSPTS       P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  Y+P+ P YSP+S  +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1947 YSPTSPTYSLTSPAISPEDSDE 1968

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624

[56][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
            RepID=O35559_CRIGR
          Length = 1970

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897

 Score =  108 bits (270), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++P+SP YSPTS       P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  Y+P+ P YSP+S  +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624

[57][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
          Length = 1966

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPT 1877

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897

 Score =  107 bits (267), Expect = 7e-22
 Identities = 53/94 (56%), Positives = 71/94 (75%), Gaps = 7/94 (7%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932

Query: 404  S----TGYSPSQPGYSPSST--SQYTPKTNDNKD 321
            +    + YSP+ PGYSP+S   S  +P  +D ++
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISDEEN 1966

 Score =  106 bits (265), Expect = 1e-21
 Identities = 51/82 (62%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  +  SP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSP 1869

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890

 Score =  106 bits (264), Expect = 1e-21
 Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+P SP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1846 YSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925

 Score =  105 bits (262), Expect = 3e-21
 Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSP YSPTSP YSPTSP+YSP++P YSP+SP  S TSP Y+P+SP++SP 
Sbjct: 1853 YTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1913 SPTYSPTSPKYSPTSPT-YSP 1932

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPA 1856

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876

 Score =  100 bits (250), Expect = 6e-20
 Identities = 48/82 (58%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+P SP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++P+SP YSPTS       P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  Y+P+ P YSP+S  +Y+P
Sbjct: 1843 SPSYSPSSPEYTPASPKYSPTS-PKYSP 1869

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624

[58][TOP]
>UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
            RepID=B7PJA3_IXOSC
          Length = 1937

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSP+S S Y+P +
Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSPSS 1723

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPT 1750

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSPSS + Y+P++
Sbjct: 1751 SPSYSPTSPSYSPSSPN-YSPQS 1772

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSPS P Y+P+S S Y+P
Sbjct: 1716 SPSYSPSSPNYTPASPS-YSP 1735

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1722

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            +  Y+P+ P YSP+S S Y+P
Sbjct: 1723 SPNYTPASPSYSPTSPS-YSP 1742

 Score =  116 bits (291), Expect = 1e-24
 Identities = 59/89 (66%), Positives = 69/89 (77%), Gaps = 8/89 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            ++P+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSPSSP  S  SP YSP SP +SPS
Sbjct: 1726 YTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPS 1785

Query: 401  T-GYSPSQPGYSPSSTS------QYTPKT 336
            +  YSP+ P YSP+S S      QYTP +
Sbjct: 1786 SPKYSPTSPSYSPTSPSYSPGSPQYTPSS 1814

 Score =  115 bits (289), Expect = 2e-24
 Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSPSSP  +  SP YSP+SP +SP 
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPT 1743

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSP+S S Y+P +
Sbjct: 1744 SPSYSPTSPSYSPTSPS-YSPSS 1765

 Score =  114 bits (285), Expect = 5e-24
 Identities = 56/82 (68%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSPSYSP+SP YSPTSP YSP+SPTY+PSSP  S TSP YSP+SPQ+SP
Sbjct: 1816 KYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSP 1875

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S + Y+P
Sbjct: 1876 TSPKYSPTSPKYSPTSPT-YSP 1896

 Score =  114 bits (284), Expect = 7e-24
 Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +P+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1608 TPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1668 PSYSPTSPSYSPTSPS-YSP 1686

 Score =  112 bits (280), Expect = 2e-23
 Identities = 56/83 (67%), Positives = 66/83 (79%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP SP YSP+SP YSPTSPSYSPTSPSYSP SP Y+PSSP  S TSP YSP+SP +SPS
Sbjct: 1775 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPS 1834

Query: 401  T-GYSPSQPGYSPSSTSQYTPKT 336
            +  YSP+ P YSP+S + YTP +
Sbjct: 1835 SPKYSPTSPKYSPTSPT-YTPSS 1856

 Score =  112 bits (279), Expect = 3e-23
 Identities = 54/83 (65%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SP+Y+P SPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1705 YSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1764

Query: 401  T-GYSPSQPGYSPSSTSQYTPKT 336
            +  YSP  P YSP S S Y+P +
Sbjct: 1765 SPNYSPQSPSYSPGSPS-YSPSS 1786

 Score =  112 bits (279), Expect = 3e-23
 Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 5/84 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            ++PSSP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP +SP+
Sbjct: 1852 YTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1911

Query: 401  ----TGYSPSQPGYSPSSTSQYTP 342
                + YSP+ PGYSPSS + Y+P
Sbjct: 1912 SPKGSSYSPTSPGYSPSSPT-YSP 1934

 Score =  109 bits (273), Expect = 1e-22
 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP  +P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1600 YAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1659

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1660 SPSYSPTSPSYSPTSPS-YSP 1679

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP SP Y+P+SP YSPTSP+YSPTSPSYSPSSP YSP+SP  S TSP Y+PSSP++SP 
Sbjct: 1803 YSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPT 1862

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1863 SPQYSPTSPQYSPTS-PKYSP 1882

 Score =  108 bits (270), Expect = 3e-22
 Identities = 53/81 (65%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+P+SPS +P SP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1593 YSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPT 1652

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672

 Score =  107 bits (268), Expect = 5e-22
 Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP+Y+P+SP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1837 KYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSP 1896

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1897 TSPKYSPTSPTYSPTSPKGSSYSP 1920

 Score =  107 bits (267), Expect = 7e-22
 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSP SPSYSP SPSYSP+SP YSP+SP+YSP+SP  S  SP Y+PSSP++SP 
Sbjct: 1761 YSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPT 1820

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPSS  +Y+P
Sbjct: 1821 SPTYSPTSPSYSPSS-PKYSP 1840

 Score =  107 bits (266), Expect = 9e-22
 Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP SP YSP SPSYSP+SP YSPTSPSYSP+SP+YSP SP  + +SP YSP+SP +SP 
Sbjct: 1768 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPT 1827

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSPS P YSP+S  +Y+P
Sbjct: 1828 SPSYSPSSPKYSPTS-PKYSP 1847

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/80 (62%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SP SP YSP+SP+Y+P+SPS +P SP+YSP+SP+YSP+SP  S TSP+YSP+SP +SP S
Sbjct: 1587 SPVSPNYSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTS 1646

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1647 PSYSPTSPSYSPTSPS-YSP 1665

 Score =  100 bits (250), Expect = 6e-20
 Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423
            +SPSSP YSPTSPSYSPTSPSYSP SP Y+       P+SPTYSP+SP  S +SP YSP+
Sbjct: 1782 YSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPT 1841

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP++SP S  Y+PS P YSP+S  QY+P
Sbjct: 1842 SPKYSPTSPTYTPSSPKYSPTS-PQYSP 1868

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTSPSYSP       +SP+YSP SPSYSP SP+YSPSSP  S TSP YSP+
Sbjct: 1740 YSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPT 1799

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S  Y+PS P YSP+S + Y+P
Sbjct: 1800 SPSYSPGSPQYTPSSPKYSPTSPT-YSP 1826

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 51/78 (65%), Positives = 59/78 (75%), Gaps = 4/78 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1865 QYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSP- 1923

Query: 413  FSPSTGYSPSQPGYSPSS 360
                 GYSPS P YSP+S
Sbjct: 1924 -----GYSPSSPTYSPTS 1936

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 49/80 (61%), Positives = 59/80 (73%), Gaps = 12/80 (15%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ--- 414
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SPTYSP+SP  S TSP YSP+SP+   
Sbjct: 1858 KYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSS 1917

Query: 413  -------FSPSTG-YSPSQP 378
                   +SPS+  YSP+ P
Sbjct: 1918 YSPTSPGYSPSSPTYSPTSP 1937

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 44/86 (51%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
 Frame = -2

Query: 578  FSPS-----SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTY-SPSSPYNSGTSPDYSPSSP 417
            FSPS     S YSP S   SP   S  P SP+ SP+SP   SP SP  S +SP Y+PSSP
Sbjct: 1547 FSPSAASDASGYSPASAGLSP-GWSPQPGSPASSPASPYIPSPVSPNYSPSSPAYAPSSP 1605

Query: 416  QFSP-STGYSPSQPGYSPSSTSQYTP 342
              +P S  YSP+ P YSP+S S Y+P
Sbjct: 1606 SMTPASPTYSPTSPSYSPTSPS-YSP 1630

[59][TOP]
>UniRef100_B4DET1 cDNA FLJ53860, highly similar to DNA-directed RNA polymerase II
           largest subunit (EC 2.7.7.6) n=1 Tax=Homo sapiens
           RepID=B4DET1_HUMAN
          Length = 855

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 636

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + YTP
Sbjct: 637 SPSYSPTSPNYSPTSPN-YTP 656

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 528 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 587

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 588 SPSYSPTSPSYSPTSPS-YSP 607

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 535 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 594

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 595 SPSYSPTSPSYSPTSPS-YSP 614

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 615

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 616 SPSYSPTSPSYSPTSPS-YSP 635

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 622

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 623 SPSYSPTSPSYSPTSPS-YSP 642

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 657

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + YTP
Sbjct: 658 SPSYSPTSPSYSPTSPN-YTP 677

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 629

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + Y+P
Sbjct: 630 SPSYSPTSPSYSPTSPN-YSP 649

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 650

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  Y+P+ P YSP+S S Y+P
Sbjct: 651 SPNYTPTSPSYSPTSPS-YSP 670

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 507 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 566

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 567 SPSYSPTSPSYSPTSPS-YSP 586

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 619 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 678

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 679 SPNYSPTSPSYSPTSPS-YSP 698

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 640 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 699

Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
           S  YSPS P Y+P S + YTP +
Sbjct: 700 SPSYSPSSPRYTPQSPT-YTPSS 721

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 647 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 706

Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
           +         Y+PS P YSPSS S Y+P
Sbjct: 707 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 733

 Score =  109 bits (273), Expect = 1e-22
 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 675 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 734

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  Y+P+ P YSP+S  +Y+P
Sbjct: 735 SPKYTPTSPKYSPTS-PKYSP 754

 Score =  108 bits (271), Expect = 2e-22
 Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+ P +SP
Sbjct: 744 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSP 803

Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
            S  YSP+ P YSP+S   S Y+P
Sbjct: 804 TSPKYSPTSPTYSPTSPKGSTYSP 827

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/82 (64%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 709 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 768

Query: 404 ST-GYSPSQPGYSPSSTSQYTP 342
           +T  YSP+ P YSP+S   YTP
Sbjct: 769 TTPKYSPTSPTYSPTS-PVYTP 789

 Score =  106 bits (264), Expect = 1e-21
 Identities = 52/81 (64%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 731 YSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 790

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S  +Y+P
Sbjct: 791 SPKYSPTGPTYSPTS-PKYSP 810

 Score =  105 bits (263), Expect = 2e-21
 Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+ P  S TSP YSP+SP +SP
Sbjct: 758  KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSP 817

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 818  TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 850

 Score =  104 bits (259), Expect = 6e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSP+SP++SP 
Sbjct: 696 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPT 755

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP +T +Y+P
Sbjct: 756 SPKYSPTSPTYSP-TTPKYSP 775

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
           PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 476 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 535

Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 536 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 572

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
           ++P+SP YSPTS       P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 654 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 713

Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
           SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 714 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 740

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPT P+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 772  KYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 831

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 832  YSPTSPTYSLTSPAISPDDSDE 853

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
           FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 445 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 497

Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
            + P +  GY+P  P YSP+S S Y+P
Sbjct: 498 AYEPRSPGGYTPQSPSYSPTSPS-YSP 523

[60][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
          Length = 1970

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPA 1835

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925

 Score =  107 bits (267), Expect = 7e-22
 Identities = 53/81 (65%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSP+SPSYSP SP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1818 YTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965

 Score =  106 bits (265), Expect = 1e-21
 Identities = 51/82 (62%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSP SP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPT 1856

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++P+SP YSPTS       P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPAS-PKYTP 1841

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 50/88 (56%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S  SP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPT 1842

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  Y+P+ P YSP+S  +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624

[61][TOP]
>UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
            RepID=C5DXL0_ZYGRC
          Length = 1744

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP +SP 
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPT 1681

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPSYSPTSPS-YSP 1701

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1640 SPSYSPTSPSYSPTSPS-YSP 1659

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1647 SPSYSPTSPSYSPTSPS-YSP 1666

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1661 SPSYSPTSPNYSPTSPS-YSP 1680

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  116 bits (291), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1559 YSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1619 SPSYSPTSPSYSPTSPS-YSP 1638

 Score =  116 bits (290), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSPSSP YSPTSPSYSPTSPSYSP SP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1538 FSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1598 SPSYSPTSPSYSPTSPS-YSP 1617

 Score =  115 bits (289), Expect = 2e-24
 Identities = 59/98 (60%), Positives = 72/98 (73%), Gaps = 11/98 (11%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702

Query: 404  STGYSPSQPGYSPSST---------SQYTPKTNDNKDD 318
            S  YSP+ P YSP+S          S  +PK +D + D
Sbjct: 1703 SPSYSPTSPSYSPTSPNYSPGSPTYSPSSPKQDDREKD 1740

 Score =  107 bits (268), Expect = 5e-22
 Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
 Frame = -2

Query: 569  SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
            SSP +SP+SP+YSPTSPSYSPTSPSYSP SP YSP+SP  S TSP YSP+SP +SP S  
Sbjct: 1534 SSPGFSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1593

Query: 395  YSPSQPGYSPSSTSQYTP 342
            YSP+ P YSP+S S Y+P
Sbjct: 1594 YSPTSPSYSPTSPS-YSP 1610

[62][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
            RepID=RPB1_MOUSE
          Length = 1970

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPT 1877

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965

 Score =  106 bits (265), Expect = 1e-21
 Identities = 51/82 (62%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  +  SP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSP 1869

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890

 Score =  106 bits (264), Expect = 1e-21
 Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+P SP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1846 YSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925

 Score =  105 bits (262), Expect = 3e-21
 Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSP YSPTSP YSPTSP+YSP++P YSP+SP  S TSP Y+P+SP++SP 
Sbjct: 1853 YTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1913 SPTYSPTSPKYSPTSPT-YSP 1932

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPA 1856

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876

 Score =  100 bits (250), Expect = 6e-20
 Identities = 48/82 (58%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+P SP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++P+SP YSPTS       P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  Y+P+ P YSP+S  +Y+P
Sbjct: 1843 SPSYSPSSPEYTPASPKYSPTS-PKYSP 1869

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624

[63][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Euarchontoglires
            RepID=RPB1_HUMAN
          Length = 1970

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897

 Score =  108 bits (270), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++P+SP YSPTS       P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  Y+P+ P YSP+S  +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624

[64][TOP]
>UniRef100_P11414 DNA-directed RNA polymerase II subunit RPB1 (Fragment) n=1
           Tax=Cricetulus griseus RepID=RPB1_CRIGR
          Length = 467

 Score =  117 bits (294), Expect = 5e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 175 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 234

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + YTP
Sbjct: 235 SPSYSPTSPNYSPTSPN-YTP 254

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 126 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 185

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 186 SPSYSPTSPSYSPTSPS-YSP 205

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 133 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 192

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 193 SPSYSPTSPSYSPTSPS-YSP 212

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 154 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 213

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 214 SPSYSPTSPSYSPTSPS-YSP 233

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 161 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 220

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 221 SPSYSPTSPSYSPTSPS-YSP 240

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 196 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 255

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + YTP
Sbjct: 256 SPSYSPTSPSYSPTSPN-YTP 275

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 168 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 227

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + Y+P
Sbjct: 228 SPSYSPTSPSYSPTSPN-YSP 247

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 189 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 248

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  Y+P+ P YSP+S S Y+P
Sbjct: 249 SPNYTPTSPSYSPTSPS-YSP 268

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 105 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 164

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 165 SPSYSPTSPSYSPTSPS-YSP 184

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 217 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 276

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 277 SPNYSPTSPSYSPTSPS-YSP 296

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 273 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 332

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  Y+P+ P YSPSS  +YTP
Sbjct: 333 SPKYTPTSPSYSPSS-PEYTP 352

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 238 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 297

Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
           S  YSPS P Y+P S + YTP +
Sbjct: 298 SPSYSPSSPRYTPQSPT-YTPSS 319

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 245 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 304

Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
           +         Y+PS P YSPSS S Y+P
Sbjct: 305 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 331

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 356 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 415

Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
            S  YSP+ P YSP+S   S Y+P
Sbjct: 416 TSPKYSPTSPTYSPTSPKGSTYSP 439

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 315 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 374

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + Y+P
Sbjct: 375 SPTYSPTTPKYSPTSPT-YSP 394

 Score =  108 bits (270), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 307 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 366

Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP +T +Y+P
Sbjct: 367 TSPKYSPTSPTYSP-TTPKYSP 387

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 343 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 402

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S  +Y+P
Sbjct: 403 SPKYSPTSPTYSPTS-PKYSP 422

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 370 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 429

Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
           +    + YSP+ PGYSP+S +        + DD
Sbjct: 430 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 462

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 294 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 353

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S  +Y+P
Sbjct: 354 SPKYSPTSPKYSPTS-PKYSP 373

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 335 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 394

Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S + Y+P
Sbjct: 395 TSPVYTPTSPKYSPTSPT-YSP 415

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
           PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 74  PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 133

Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 134 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 170

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
           ++P+SP YSPTS       P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 252 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 311

Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
           SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 312 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 338

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
           +SP+SP YSPTS       PSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+
Sbjct: 280 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 339

Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
           SP +SPS+  Y+P+ P YSP+S  +Y+P
Sbjct: 340 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 366

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
           ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 384 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 443

Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
           +SP S  YS + P  SP  + +
Sbjct: 444 YSPTSPTYSLTSPAISPDDSDE 465

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
           FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 43  FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 95

Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
            + P +  GY+P  P YSP+S S Y+P
Sbjct: 96  AYEPRSPGGYTPQSPSYSPTSPS-YSP 121

[65][TOP]
>UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis
            RepID=UPI000186D846
          Length = 1885

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1601 YSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1661 SPSYSPTSPSYSPTSPS-YSP 1680

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694

 Score =  116 bits (291), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1594 YSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673

 Score =  116 bits (291), Expect = 1e-24
 Identities = 55/80 (68%), Positives = 68/80 (85%), Gaps = 2/80 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPS 1716

Query: 401  T-GYSPSQPGYSPSSTSQYT 345
            +  Y+P+ P +SP+S S Y+
Sbjct: 1717 SPNYTPASPSFSPTSPSLYS 1736

 Score =  116 bits (290), Expect = 1e-24
 Identities = 56/77 (72%), Positives = 65/77 (84%), Gaps = 2/77 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681

Query: 404  STGYSPSQPGYSPSSTS 354
            S  YSP+ P YSP+S S
Sbjct: 1682 SPSYSPTSPSYSPTSPS 1698

 Score =  115 bits (289), Expect = 2e-24
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-P 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +S  
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRT 1702

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPSS + YTP
Sbjct: 1703 SPSYSPTSPSYSPSSPN-YTP 1722

 Score =  114 bits (285), Expect = 5e-24
 Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YS + P YSP+S S Y+P +
Sbjct: 1696 SPSYSRTSPSYSPTSPS-YSPSS 1717

 Score =  110 bits (274), Expect = 1e-22
 Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            F+P+SP        YSPTSPSYSP+SP+YSP SPSYSP+SP+YSP+SP  S TSP YSP+
Sbjct: 1573 FAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1659

 Score =  108 bits (269), Expect = 4e-22
 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP ++PTSPS +PTS +YSPTSPSYSPSSP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1566 YSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPT 1625

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645

 Score =  108 bits (269), Expect = 4e-22
 Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYS +SP+YSP+SP  S +SP+Y+P+SP FSP 
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPT 1730

Query: 404  ------STGYSPSQPGYSPSSTSQYTP 342
                  S  YSP+ P YSP S  +Y+P
Sbjct: 1731 SPSLYSSPRYSPASPSYSPGS-PKYSP 1756

 Score =  107 bits (267), Expect = 7e-22
 Identities = 59/93 (63%), Positives = 67/93 (72%), Gaps = 14/93 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD------YSPSS 420
            +SP+SP YSPTSPSYS TSPSYSPTSPSYSPSSP Y+P+SP  S TSP       YSP+S
Sbjct: 1685 YSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPAS 1744

Query: 419  PQFSP-STGYSPSQPGYSPSSTS------QYTP 342
            P +SP S  YSP+ P YSP+S S      QYTP
Sbjct: 1745 PSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTP 1777

 Score =  107 bits (266), Expect = 9e-22
 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 9/91 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP SP YSPTSPSYSPTSPSY+  SP Y+P+SP YSP+SP  S TSP YSPSSP  +P 
Sbjct: 1747 YSPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPG 1806

Query: 404  -STGYSPSQPGYSPSSTS------QYTPKTN 333
             ST YSP+ P YSP+S S      QY+P ++
Sbjct: 1807 ASTRYSPTSPKYSPTSLSYSPASPQYSPSSS 1837

 Score =  102 bits (254), Expect = 2e-20
 Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            FSP+SP   +SP YSP SPSYSP SP YSP+SP+YSP+SP  +  SP Y+P+SPQ+SP S
Sbjct: 1727 FSPTSPSLYSSPRYSPASPSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTS 1786

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSPSS S +TP
Sbjct: 1787 PTYSPTSPSYSPSSPS-HTP 1805

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 54/99 (54%), Positives = 67/99 (67%), Gaps = 8/99 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
            +SPSSP Y+P SPS+SPTSPS      YSP SPSYSP SP YSP+SP  S TSP Y+  S
Sbjct: 1713 YSPSSPNYTPASPSFSPTSPSLYSSPRYSPASPSYSPGSPKYSPTSPSYSPTSPSYASVS 1772

Query: 419  PQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
            PQ++P S  YSP+ P YSP+S S Y+P +  +     T+
Sbjct: 1773 PQYTPTSPQYSPTSPTYSPTSPS-YSPSSPSHTPGASTR 1810

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  YSP+SP+++PTSPS +PTS +YSP+SP+YSPSSP  S  SP YSP+SP +SP S  Y
Sbjct: 1563 SPSYSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSY 1622

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1623 SPTSPSYSPTSPS-YSP 1638

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 51/84 (60%), Positives = 58/84 (69%), Gaps = 11/84 (13%)
 Frame = -2

Query: 578  FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
            +SPSSP         YSPTSP YSPTS SYSP SP YSPSS  YSP+SP  + TSPDYS 
Sbjct: 1796 YSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSA 1855

Query: 425  SSPQFSPS--TGYSPSQPGYSPSS 360
            SSP +SP+    YSP+ P YSP+S
Sbjct: 1856 SSPTYSPTGPPSYSPTSPTYSPTS 1879

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 56/101 (55%), Positives = 69/101 (68%), Gaps = 17/101 (16%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYS-------PTSPSYSPTSPSYSPSSPTYSPSSPYN--------S 450
            ++SP+SP YSPTSPSY+       PTSP YSPTSP+YSP+SP+YSPSSP +        S
Sbjct: 1753 KYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYS 1812

Query: 449  GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTND 330
             TSP YSP+S  +SP S  YSPS   YSP+S + YTP + D
Sbjct: 1813 PTSPKYSPTSLSYSPASPQYSPSSSKYSPTSPT-YTPTSPD 1852

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 54/110 (49%), Positives = 65/110 (59%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPT--------YSPSSPYNSG 447
            +SP+SP        Y+PTSP YSPTSP+YSPTSPSYSPSSP+        YSP+SP  S 
Sbjct: 1761 YSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSP 1820

Query: 446  TSPDYSPSSPQFSPSTG---------------YSPSQPGYSPSSTSQYTP 342
            TS  YSP+SPQ+SPS+                YS S P YSP+    Y+P
Sbjct: 1821 TSLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSP 1870

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 38/58 (65%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGTSPDYSPSSPQF 411
            +SP+SP YSP+S  YSPTSP+Y+PTSP YS SSPTYSP+ P + S TSP YSP+SP++
Sbjct: 1825 YSPASPQYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPTYSPTSPEY 1882

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 33/52 (63%), Positives = 43/52 (82%), Gaps = 2/52 (3%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-TYSPSSPYNSGTSPDY 432
            ++SPSS  YSPTSP+Y+PTSP YS +SP+YSP+ P +YSP+SP  S TSP+Y
Sbjct: 1831 QYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPTYSPTSPEY 1882

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 45/92 (48%), Positives = 53/92 (57%), Gaps = 11/92 (11%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSY-SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            FSPS  S  S  SP YSP SP   SP+SP   PS+  Y PS     G SP YSPSSP F+
Sbjct: 1519 FSPSGSSDASGLSPGYSPWSPQPGSPSSPG--PSNSPYVPSP--GGGMSPSYSPSSPAFA 1574

Query: 407  P--------STGYSPSQPGYSPSSTSQYTPKT 336
            P        S+ YSP+ P YSPSS + Y+P +
Sbjct: 1575 PTSPSMTPTSSNYSPTSPSYSPSSPN-YSPNS 1605

[66][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma floridae
            RepID=UPI000186501C
          Length = 1956

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 70/81 (86%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+Y+P+SP++SP 
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1759 SPSYSPTSPSYSPASPS-YSP 1778

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/83 (68%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  + TSP YSP+SP +SP 
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPT 1765

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSP+S S Y+P +
Sbjct: 1766 SPSYSPASPSYSPTSPS-YSPSS 1787

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPT 1779

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSPS P YSP S S Y+P +
Sbjct: 1780 SPSYSPSSPNYSPQSPS-YSPSS 1801

 Score =  115 bits (287), Expect = 3e-24
 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P Y+P+S  +Y+P
Sbjct: 1738 SPSYSPTSPNYTPTS-PKYSP 1757

 Score =  114 bits (285), Expect = 5e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSP SP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1615 YSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694

 Score =  114 bits (285), Expect = 5e-24
 Identities = 59/89 (66%), Positives = 68/89 (76%), Gaps = 9/89 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTSPSYSPTSP+       YSPTSPSYSP+SP+YSP+SP  S TSP YSPS
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPS 1786

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTPK 339
            SP +SP S  YSPS P YSPSS +  +PK
Sbjct: 1787 SPNYSPQSPSYSPSSPSYSPSSPNPSSPK 1815

 Score =  111 bits (278), Expect = 4e-23
 Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +P SP YSPTSPSYSPTSPSYSP SP+YSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1609 TPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687

 Score =  110 bits (276), Expect = 6e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 7/88 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            ++P+SP YSPTSPSYSPTSPSYSP SPSYSP+SP+YSPSSP  S  SP YSPSSP +SPS
Sbjct: 1748 YTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPSSPSYSPS 1807

Query: 401  T------GYSPSQPGYSPSSTSQYTPKT 336
            +       Y+P+ P YSPSS  +Y+P +
Sbjct: 1808 SPNPSSPKYTPTSPKYSPSS-PKYSPSS 1834

 Score =  105 bits (262), Expect = 3e-21
 Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 7/86 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPS-----YSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SPSSP YSP SPSYSP+SPSYSP+SP+     Y+P+SP YSPSSP  S +SP YSP+SP
Sbjct: 1783 YSPSSPNYSPQSPSYSPSSPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSP 1842

Query: 416  QFSPSTG-YSPSQPGYSPSSTSQYTP 342
             +SPS+  YSP+ P YSP ST +YTP
Sbjct: 1843 TYSPSSAKYSPASPSYSP-STPKYTP 1867

 Score =  103 bits (258), Expect = 7e-21
 Identities = 51/85 (60%), Positives = 65/85 (76%), Gaps = 4/85 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSS  YSP SPSYSP++P Y+PTSP YSP+SPTY+P+SP  S TSP Y+P +P++SP 
Sbjct: 1844 YSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPT 1903

Query: 404  STGYSPSQPGYSPSST--SQYTPKT 336
            S  YSP+ P YSP+S   S Y+P T
Sbjct: 1904 SPKYSPTSPTYSPTSPKGSTYSPTT 1928

 Score =  103 bits (256), Expect = 1e-20
 Identities = 49/87 (56%), Positives = 69/87 (79%), Gaps = 1/87 (1%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP SP+Y+PTSP YSPTSPSY+P +P YSP+SP  S TSP YSP+SP+ S 
Sbjct: 1864 KYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGST 1923

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNK 324
               YSP+ PGYSP+S + Y+P++ +++
Sbjct: 1924 ---YSPTTPGYSPASPT-YSPESPESR 1946

 Score =  102 bits (254), Expect = 2e-20
 Identities = 53/95 (55%), Positives = 65/95 (68%), Gaps = 14/95 (14%)
 Frame = -2

Query: 578  FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SPSSP      Y+PTSP YSP+SP YSP+SP YSP+SPTYSPSS   S  SP YSPS+P
Sbjct: 1804 YSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTP 1863

Query: 416  QFSP--------STGYSPSQPGYSPSSTSQYTPKT 336
            +++P        S  Y+P+ P YSP+S S YTP T
Sbjct: 1864 KYTPTSPKYSPASPTYTPTSPKYSPTSPS-YTPDT 1897

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 453
            P+SPY P+     SPSYSP SP+               YSPTSPSYSP+SP+YSP+SP  
Sbjct: 1577 PASPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNY 1636

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 7/86 (8%)
 Frame = -2

Query: 578  FSPSSPY---S---PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SPSSP    S   P+SP Y+PTSP YSP+SP YSPSSP YSP+SP  S +S  YSP+SP
Sbjct: 1797 YSPSSPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASP 1856

Query: 416  QFSPST-GYSPSQPGYSPSSTSQYTP 342
             +SPST  Y+P+ P YSP+S + YTP
Sbjct: 1857 SYSPSTPKYTPTSPKYSPASPT-YTP 1881

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 47/89 (52%), Positives = 65/89 (73%), Gaps = 9/89 (10%)
 Frame = -2

Query: 581  RFSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
            +++P+SP YSP+S       P YSPTSP+YSP+S  YSP+SP+YSPS+P  + TSP YSP
Sbjct: 1815 KYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSP 1874

Query: 425  SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP ++P S  YSP+ P Y+P  T +Y+P
Sbjct: 1875 ASPTYTPTSPKYSPTSPSYTP-DTPKYSP 1902

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 4/58 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSP---SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
            ++SP+SP YSPTSP+YSPTSP   +YSPT+P YSP+SPTYSP SP +  T  +    S
Sbjct: 1899 KYSPTSPKYSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSPESPESRATQEEEEDES 1956

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQF 411
            FSPS+    +  S +  SP++SPT  S  P SP   P+SPY        SP YSP+SP +
Sbjct: 1545 FSPSAASDASGMSPAGYSPAWSPTPGS--PGSP--GPASPYIPSPGGPMSPSYSPASPAY 1600

Query: 410  SP---------STGYSPSQPGYSPSSTSQYTP 342
             P         S GYSP+ P YSP+S S Y+P
Sbjct: 1601 MPRSPGGMTPQSPGYSPTSPSYSPTSPS-YSP 1631

[67][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
            (RNA polymerase II subunit B1) (DNA-directed RNA
            polymerase III largest subunit) n=1 Tax=Acyrthosiphon
            pisum RepID=UPI000179348F
          Length = 1862

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1709 SPSYSPTSPSYSPTSPS-YSP 1728

 Score =  116 bits (290), Expect = 1e-24
 Identities = 59/81 (72%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSPS P Y+ SS S YTP
Sbjct: 1730 SPSYSPSSPQYAASSPS-YTP 1749

 Score =  111 bits (277), Expect = 5e-23
 Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 7/86 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYS-----PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SP+SP YSPTSPSYS     PTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP
Sbjct: 1630 YSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689

Query: 416  QFSP-STGYSPSQPGYSPSSTSQYTP 342
             +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1690 SYSPTSPSYSPTSPSYSPTSPS-YSP 1714

 Score =  106 bits (265), Expect = 1e-21
 Identities = 59/117 (50%), Positives = 73/117 (62%), Gaps = 28/117 (23%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSPSSPQ++ S
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAAS 1743

Query: 401  TG---------------------------YSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            +                            YSP+ P YSPS+ S Y+P +  +  + G
Sbjct: 1744 SPSYTPSATSGTSNYKYSPTSPSLAVSPTYSPTSPMYSPSNAS-YSPSSLQHTPNAG 1799

 Score =  102 bits (254), Expect = 2e-20
 Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            SP+  YSPTSPSYSPTSPSYS TS  YSP+SP+YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1625 SPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/101 (48%), Positives = 60/101 (59%), Gaps = 21/101 (20%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSS-------------PTYSPSSPYNSGT- 444
            ++SP+SP    SP+YSPTSP YSP++ SYSPSS              +YSPSSP  S T 
Sbjct: 1759 KYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTN 1818

Query: 443  ----SPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTP 342
                SP YSP+SP +SP  G   YSPS P YSP+S +   P
Sbjct: 1819 FSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSGP 1859

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 52/115 (45%), Positives = 64/115 (55%), Gaps = 35/115 (30%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSP---------------------------TSPSYSPSS 483
            +SP+SP YSPTSPSYSPTSPSYSP                           TSPS +  S
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTPSATSGTSNYKYSPTSPSLA-VS 1770

Query: 482  PTYSPSSPYNSGTSPDYSPSSPQFSPSTG-------YSPSQPGYSPSSTSQYTPK 339
            PTYSP+SP  S ++  YSPSS Q +P+ G       YSPS P YSP++ S  +P+
Sbjct: 1771 PTYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTNFSMASPR 1825

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 38/58 (65%), Positives = 42/58 (72%), Gaps = 8/58 (13%)
 Frame = -2

Query: 578  FSPSSP-YSPT-----SPSYSPTSPSYSP--TSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SPSSP YSPT     SP YSPTSP+YSP   SP YSPSSP+YSP+SP  SG  PD S
Sbjct: 1807 YSPSSPVYSPTNFSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSG--PDES 1862

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
 Frame = -2

Query: 569  SSPYSPT----SPSYS-PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +SPY P+    SP+Y+ P+SP +   SPS +P++  YSP+SP  S T  + +P     SP
Sbjct: 1570 TSPYVPSPSSMSPNYNYPSSPQFGSLSPSMTPTN--YSPTSPQYSATQQN-TPKYSSMSP 1626

Query: 404  STGYSPSQPGYSPSSTS 354
            +  YSP+ P YSP+S S
Sbjct: 1627 NYNYSPTSPSYSPTSPS 1643

[68][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
            (RNA polymerase II subunit B1) (DNA-directed RNA
            polymerase III largest subunit) n=1 Tax=Acyrthosiphon
            pisum RepID=UPI000179338A
          Length = 1862

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1709 SPSYSPTSPSYSPTSPS-YSP 1728

 Score =  116 bits (290), Expect = 1e-24
 Identities = 59/81 (72%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSPS P Y+ SS S YTP
Sbjct: 1730 SPSYSPSSPQYTASSPS-YTP 1749

 Score =  111 bits (277), Expect = 5e-23
 Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 7/86 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYS-----PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SP+SP YSPTSPSYS     PTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP
Sbjct: 1630 YSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689

Query: 416  QFSP-STGYSPSQPGYSPSSTSQYTP 342
             +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1690 SYSPTSPSYSPTSPSYSPTSPS-YSP 1714

 Score =  104 bits (259), Expect = 6e-21
 Identities = 56/110 (50%), Positives = 71/110 (64%), Gaps = 21/110 (19%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S +SP Y+ SSP ++PS
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSYTPS 1750

Query: 401  T--------------------GYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
                                  YSP+ P YSPS+ S Y+P +  +  + G
Sbjct: 1751 ATSGASNYKYSPTSPSLAVSPTYSPTSPMYSPSNAS-YSPSSVQHTPNAG 1799

 Score =  102 bits (254), Expect = 2e-20
 Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            SP+  YSPTSPSYSPTSPSYS TS  YSP+SP+YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1625 SPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 49/102 (48%), Positives = 61/102 (59%), Gaps = 21/102 (20%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSS-------------PTYSPSSPYNSGT- 444
            ++SP+SP    SP+YSPTSP YSP++ SYSPSS              +YSPSSP  S T 
Sbjct: 1759 KYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSVQHTPNAGVTQYNQSYSPSSPVYSPTN 1818

Query: 443  ----SPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTPK 339
                SP YSP+SP +SP  G   YSPS P YSP+S +   P+
Sbjct: 1819 FSLASPRYSPTSPTYSPGVGSPNYSPSSPSYSPTSPNYSGPE 1860

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 52/115 (45%), Positives = 64/115 (55%), Gaps = 35/115 (30%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSP---------------------------TSPSYSPSS 483
            +SP+SP YSPTSPSYSPTSPSYSP                           TSPS +  S
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSYTPSATSGASNYKYSPTSPSLA-VS 1770

Query: 482  PTYSPSSPYNSGTSPDYSPSSPQFSPSTG-------YSPSQPGYSPSSTSQYTPK 339
            PTYSP+SP  S ++  YSPSS Q +P+ G       YSPS P YSP++ S  +P+
Sbjct: 1771 PTYSPTSPMYSPSNASYSPSSVQHTPNAGVTQYNQSYSPSSPVYSPTNFSLASPR 1825

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 35/56 (62%), Positives = 38/56 (67%), Gaps = 7/56 (12%)
 Frame = -2

Query: 560  YSPTSPSYSPT-----SPSYSPTSPSYSPS--SPTYSPSSPYNSGTSPDYSPSSPQ 414
            YSP+SP YSPT     SP YSPTSP+YSP   SP YSPSSP  S TSP+YS    Q
Sbjct: 1807 YSPSSPVYSPTNFSLASPRYSPTSPTYSPGVGSPNYSPSSPSYSPTSPNYSGPEEQ 1862

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
 Frame = -2

Query: 569  SSPYSPT----SPSYS-PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +SPY P+    SP+Y+ P+SP +   SPS +P++  YSP+SP  S T  + +P     SP
Sbjct: 1570 TSPYVPSPNSMSPNYNYPSSPQFGSMSPSMTPTN--YSPTSPQYSATQQN-TPKYSSMSP 1626

Query: 404  STGYSPSQPGYSPSSTS 354
            +  YSP+ P YSP+S S
Sbjct: 1627 NYNYSPTSPSYSPTSPS 1643

[69][TOP]
>UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC
            6260 RepID=UPI000151A8B3
          Length = 1018

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 833  YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 892

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 893  SPSYSPTSPSYSPTSPS-YSP 912

 Score =  113 bits (283), Expect = 9e-24
 Identities = 54/74 (72%), Positives = 63/74 (85%), Gaps = 2/74 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 840  YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 899

Query: 404  STGYSPSQPGYSPS 363
            S  YSP+ P YSP+
Sbjct: 900  SPSYSPTSPSYSPT 913

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 816  SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 875

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 876  SPTSPSYSPTSPS-YSP 891

 Score =  106 bits (264), Expect = 1e-21
 Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  Y  TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 809  SPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 868

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 869  SPTSPSYSPTSPS-YSP 884

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/71 (69%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP+
Sbjct: 854  YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 913

Query: 401  TGYSPSQPGYS 369
              ++  QP +S
Sbjct: 914  --FAKLQPNFS 922

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 51/88 (57%), Positives = 61/88 (69%), Gaps = 10/88 (11%)
 Frame = -2

Query: 575  SPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            SP+SP         Y   SP Y  TSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+
Sbjct: 791  SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 850

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 851  SPSYSPTSPSYSPTSPSYSPTSPS-YSP 877

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 47/79 (59%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
 Frame = -2

Query: 572  PSSPYSPTSP-SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            P SP SPTSP +Y  TSP+Y   SP Y  +SPTYSP+SP  S TSP YSP+SP +SP S 
Sbjct: 787  PGSP-SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 845

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 846  SYSPTSPSYSPTSPS-YSP 863

[70][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) n=1 Tax=Pan troglodytes RepID=UPI0000E24648
          Length = 1913

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  114 bits (286), Expect = 4e-24
 Identities = 59/96 (61%), Positives = 70/96 (72%), Gaps = 15/96 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723

Query: 404  -------------STGYSPSQPGYSPSSTSQYTPKT 336
                         S  YSP+ P YSPSS  +YTP++
Sbjct: 1724 SQSYHPTVVDSSTSPSYSPTSPSYSPSS-PRYTPQS 1758

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1802 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1861

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1862 TSPKYSPTSPTYSPTSPKGSTYSP 1885

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1761 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1820

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1821 SPTYSPTTPKYSPTSPT-YSP 1840

 Score =  108 bits (271), Expect = 2e-22
 Identities = 59/101 (58%), Positives = 70/101 (69%), Gaps = 22/101 (21%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-------------YNSGTS 441
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP              +S TS
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTS 1737

Query: 440  PDYSPSSPQFSPST--------GYSPSQPGYSPSSTSQYTP 342
            P YSP+SP +SPS+         Y+PS P YSPSS S Y+P
Sbjct: 1738 PSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPS-YSP 1777

 Score =  108 bits (270), Expect = 3e-22
 Identities = 58/96 (60%), Positives = 69/96 (71%), Gaps = 8/96 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702

Query: 404  STGYSPSQP---GYSPS---STSQYTPKTNDNKDDP 315
            S  YSP+ P     SPS   ++  Y P   D+   P
Sbjct: 1703 SPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSP 1738

 Score =  108 bits (270), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 1753 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1812

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1813 TSPKYSPTSPTYSP-TTPKYSP 1833

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1789 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1848

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1849 SPKYSPTSPTYSPTS-PKYSP 1868

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1816 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1875

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1876 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1908

 Score =  105 bits (262), Expect = 3e-21
 Identities = 57/94 (60%), Positives = 66/94 (70%), Gaps = 15/94 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSP-------------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
            +SP+SP YSPTSPSYSP             TSPSYSPTSPSYSPSSP Y+P SP  + +S
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPSYSPSSPRYTPQSPTYTPSS 1765

Query: 440  PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P YSPSSP +SP S  Y+P+ P YSPSS  +YTP
Sbjct: 1766 PSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1798

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1781 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1840

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1841 TSPVYTPTSPKYSPTSPT-YSP 1861

 Score =  102 bits (254), Expect = 2e-20
 Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399
            S S  YSPTSPSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+SP +SPS+ 
Sbjct: 1735 STSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSP 1794

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             Y+P+ P YSP+S  +Y+P
Sbjct: 1795 EYTPTSPKYSPTS-PKYSP 1812

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673

 Score =  100 bits (249), Expect = 8e-20
 Identities = 53/94 (56%), Positives = 67/94 (71%), Gaps = 15/94 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
            +SP+SP YSPTS             PSYSPTSPSYSP+SP Y+P SPTY+PSSP  S +S
Sbjct: 1713 YSPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1772

Query: 440  PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P YSP+SP+++P S  YSPS P Y+P+S  +Y+P
Sbjct: 1773 PSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 1805

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1830 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1889

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1890 YSPTSPTYSLTSPAISPDDSDE 1911

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624

[71][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B2B
          Length = 1892

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1614 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1674 SPSYSPTSPSYSPTSPS-YSP 1693

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1681 SPSYSPTSPSYSPTSPS-YSP 1700

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSP 1721

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1709 SPSYSPTSPSYSPTSPS-YSP 1728

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1723 SPSYSPTSPNYSPSRPN-YTP 1742

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S +    + N     P
Sbjct: 1716 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1745

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1736

Query: 401  -TGYSPSQPGYSPSSTSQYTP 342
               Y+P+ P YSP+S S Y+P
Sbjct: 1737 RPNYTPTSPSYSPTSPS-YSP 1756

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P  + TSP YSP+SP +SP 
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1757

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1758 SPKYTPTSPSYSPSS-PEYTP 1777

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1593 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1781 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1840

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1841 TSPKYSPTSPTYSPTSPKGSTYSP 1864

 Score =  109 bits (273), Expect = 1e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1740 YTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1799

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1800 SPTYSPTTPKYSPTSPT-YSP 1819

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1768 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1827

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1828 SPKYSPTSPTYSPTS-PKYSP 1847

 Score =  107 bits (267), Expect = 7e-22
 Identities = 51/81 (62%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1719 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1778

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1779 SPKYSPTSPKYSPTS-PKYSP 1798

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1795 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1854

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1855 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1887

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1760 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1819

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1820 TSPVYTPTSPKYSPTSPT-YSP 1840

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 54/94 (57%), Positives = 62/94 (65%), Gaps = 16/94 (17%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
            SP SP    SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  S TS
Sbjct: 1566 SPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1625

Query: 440  PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1626 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1658

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 55/104 (52%), Positives = 63/104 (60%), Gaps = 26/104 (25%)
 Frame = -2

Query: 575  SPSSPYS-------------------------PTSPSYSPTSPSYSPTSPSYSPSSPTYS 471
            +P SP S                         P SPSYSPTSPSYSPTSPSYSP+SP YS
Sbjct: 1563 TPGSPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYS 1622

Query: 470  PSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P+SP  S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1623 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP       +YSPSSP  + TSP YSP+
Sbjct: 1726 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPT 1785

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP++SP S  YSP+ P YSP +T +Y+P
Sbjct: 1786 SPKYSPTSPKYSPTSPTYSP-TTPKYSP 1812

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1809 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1868

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1869 YSPTSPTYSLTSPAISPDDSDE 1890

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 41/92 (44%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPT-----------SPSYSPSSPTYSPSSPYNSGTSP 438
            FSPS  S  S  SP YSP   ++SPT           SPSYSP+SP Y P SP       
Sbjct: 1541 FSPSAASDASGFSPGYSP---AWSPTPGSPGSPGGAMSPSYSPTSPAYEPRSPGG----- 1592

Query: 437  DYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
             Y+P SP       YSP+ P YSP+S S Y+P
Sbjct: 1593 -YTPQSPS------YSPTSPSYSPTSPS-YSP 1616

[72][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B2A
          Length = 1896

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1618 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1677

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1678 SPSYSPTSPSYSPTSPS-YSP 1697

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1685 SPSYSPTSPSYSPTSPS-YSP 1704

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1706 SPSYSPTSPSYSPTSPS-YSP 1725

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1653 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1712

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1713 SPSYSPTSPSYSPTSPS-YSP 1732

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1726

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1727 SPSYSPTSPNYSPSRPN-YTP 1746

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1719

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S +    + N     P
Sbjct: 1720 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1749

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1681 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1740

Query: 401  -TGYSPSQPGYSPSSTSQYTP 342
               Y+P+ P YSP+S S Y+P
Sbjct: 1741 RPNYTPTSPSYSPTSPS-YSP 1760

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P  + TSP YSP+SP +SP 
Sbjct: 1702 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1761

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1762 SPKYTPTSPSYSPSS-PEYTP 1781

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1597 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1657 SPSYSPTSPSYSPTSPS-YSP 1676

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1785 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1844

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1845 TSPKYSPTSPTYSPTSPKGSTYSP 1868

 Score =  109 bits (273), Expect = 1e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1744 YTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1803

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1804 SPTYSPTTPKYSPTSPT-YSP 1823

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1772 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1831

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1832 SPKYSPTSPTYSPTS-PKYSP 1851

 Score =  107 bits (267), Expect = 7e-22
 Identities = 51/81 (62%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1723 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1782

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1783 SPKYSPTSPKYSPTS-PKYSP 1802

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1799 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1858

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1859 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1891

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1764 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1823

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1824 TSPVYTPTSPKYSPTSPT-YSP 1844

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 54/94 (57%), Positives = 62/94 (65%), Gaps = 16/94 (17%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
            SP SP    SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  S TS
Sbjct: 1570 SPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1629

Query: 440  PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1630 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1662

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 55/104 (52%), Positives = 63/104 (60%), Gaps = 26/104 (25%)
 Frame = -2

Query: 575  SPSSPYS-------------------------PTSPSYSPTSPSYSPTSPSYSPSSPTYS 471
            +P SP S                         P SPSYSPTSPSYSPTSPSYSP+SP YS
Sbjct: 1567 TPGSPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYS 1626

Query: 470  PSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P+SP  S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1627 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1669

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP       +YSPSSP  + TSP YSP+
Sbjct: 1730 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPT 1789

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP++SP S  YSP+ P YSP +T +Y+P
Sbjct: 1790 SPKYSPTSPKYSPTSPTYSP-TTPKYSP 1816

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1813 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1872

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1873 YSPTSPTYSLTSPAISPDDSDE 1894

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 12/91 (13%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPS-YSPTSPSYSPS-SPTY-SPSSPYNSGTSPDYSPSSPQFS 408
            +SP S  +P +  +SP++ S  S  SP YSP+ SPT  SP SP     SP YSP+SP + 
Sbjct: 1532 WSPRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSP-GGAMSPSYSPTSPAYE 1590

Query: 407  P---------STGYSPSQPGYSPSSTSQYTP 342
            P         S  YSP+ P YSP+S S Y+P
Sbjct: 1591 PRSPGGYTPQSPSYSPTSPSYSPTSPS-YSP 1620

[73][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B29
          Length = 1891

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1597 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1657 SPSYSPTSPSYSPTSPS-YSP 1676

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1604 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1664 SPSYSPTSPSYSPTSPS-YSP 1683

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1685 SPSYSPTSPSYSPTSPS-YSP 1704

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1706 SPSYSPTSPNYSPSRPN-YTP 1725

 Score =  116 bits (291), Expect = 1e-24
 Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1719

Query: 401  -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315
               Y+P+ P YSP+S S       YTP + +    P
Sbjct: 1720 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1755

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1576 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1635

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1636 SPSYSPTSPSYSPTSPS-YSP 1655

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1780 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1839

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1840 TSPKYSPTSPTYSPTSPKGSTYSP 1863

 Score =  109 bits (272), Expect = 2e-22
 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1747

Query: 404  ---------STGYSPSQPGYSPSSTSQYTP 342
                     S  Y+P+ P YSPSS  +YTP
Sbjct: 1748 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1776

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1767 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1826

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1827 SPKYSPTSPTYSPTS-PKYSP 1846

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1794 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1853

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1854 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1886

 Score =  103 bits (258), Expect = 7e-21
 Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408
            +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+  SP  + TSP YSPSSP+++
Sbjct: 1716 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1775

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S  +Y+P
Sbjct: 1776 PTSPKYSPTSPKYSPTS-PKYSP 1797

 Score =  102 bits (253), Expect = 3e-20
 Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP  S TSP YSP++P++SP S
Sbjct: 1754 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1813

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P Y+P+S  +Y+P
Sbjct: 1814 PTYSPTSPVYTPTS-PKYSP 1832

 Score =  101 bits (251), Expect = 5e-20
 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP Y+P SP+YSPT  SP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++S
Sbjct: 1737 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1796

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S + Y+P
Sbjct: 1797 PTSPTYSPTTPKYSPTSPT-YSP 1818

 Score =  100 bits (250), Expect = 6e-20
 Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399
            SP+   +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP  S TSP YSP+SP +SP+T 
Sbjct: 1748 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1807

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S   YTP
Sbjct: 1808 KYSPTSPTYSPTS-PVYTP 1825

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1545 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1604

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1605 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1641

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1808 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1867

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1868 YSPTSPTYSLTSPAISPDDSDE 1889

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1514 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1566

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1567 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1592

[74][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B28
          Length = 1908

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1614 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1674 SPSYSPTSPSYSPTSPS-YSP 1693

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1681 SPSYSPTSPSYSPTSPS-YSP 1700

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSP 1721

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1723 SPSYSPTSPNYSPSRPN-YTP 1742

 Score =  116 bits (291), Expect = 1e-24
 Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1736

Query: 401  -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315
               Y+P+ P YSP+S S       YTP + +    P
Sbjct: 1737 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1772

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1593 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1797 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1856

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1857 TSPKYSPTSPTYSPTSPKGSTYSP 1880

 Score =  109 bits (272), Expect = 2e-22
 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1764

Query: 404  ---------STGYSPSQPGYSPSSTSQYTP 342
                     S  Y+P+ P YSPSS  +YTP
Sbjct: 1765 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1793

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1784 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1843

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1844 SPKYSPTSPTYSPTS-PKYSP 1863

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1811 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1870

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1871 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1903

 Score =  103 bits (258), Expect = 7e-21
 Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408
            +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+  SP  + TSP YSPSSP+++
Sbjct: 1733 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1792

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S  +Y+P
Sbjct: 1793 PTSPKYSPTSPKYSPTS-PKYSP 1814

 Score =  102 bits (253), Expect = 3e-20
 Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP  S TSP YSP++P++SP S
Sbjct: 1771 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1830

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P Y+P+S  +Y+P
Sbjct: 1831 PTYSPTSPVYTPTS-PKYSP 1849

 Score =  101 bits (251), Expect = 5e-20
 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP Y+P SP+YSPT  SP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++S
Sbjct: 1754 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1813

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S + Y+P
Sbjct: 1814 PTSPTYSPTTPKYSPTSPT-YSP 1835

 Score =  100 bits (250), Expect = 6e-20
 Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399
            SP+   +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP  S TSP YSP+SP +SP+T 
Sbjct: 1765 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1824

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S   YTP
Sbjct: 1825 KYSPTSPTYSPTS-PVYTP 1842

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1562 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1621

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1622 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1658

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1825 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1884

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1885 YSPTSPTYSLTSPAISPDDSDE 1906

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1531 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1583

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1584 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1609

[75][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 18 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B27
          Length = 1831

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1547 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1606

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1607 SPSYSPTSPSYSPTSPS-YSP 1626

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1554 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1613

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1614 SPSYSPTSPSYSPTSPS-YSP 1633

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1575 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1634

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1635 SPSYSPTSPSYSPTSPS-YSP 1654

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1596 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1655

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1656 SPSYSPTSPNYSPSRPN-YTP 1675

 Score =  116 bits (291), Expect = 1e-24
 Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1610 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1669

Query: 401  -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315
               Y+P+ P YSP+S S       YTP + +    P
Sbjct: 1670 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1705

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1526 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1585

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1586 SPSYSPTSPSYSPTSPS-YSP 1605

 Score =  110 bits (275), Expect = 8e-23
 Identities = 50/80 (62%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSP+YSP+ P+Y+P+SP+YSP+SP  S TSP+Y+P SP +SP+
Sbjct: 1645 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1704

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSPS P Y+P+S  +Y+P
Sbjct: 1705 PSYSPSSPEYTPTS-PKYSP 1723

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1720 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1779

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1780 TSPKYSPTSPTYSPTSPKGSTYSP 1803

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1734 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1793

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1794 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1826

 Score =  103 bits (258), Expect = 7e-21
 Identities = 52/83 (62%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+  Y S +SP+Y+P+SP++SP 
Sbjct: 1666 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSY-SPSSPEYTPTSPKYSPT 1724

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSP+S + Y+P T
Sbjct: 1725 SPKYSPTSPKYSPTSPT-YSPTT 1746

 Score =  102 bits (255), Expect = 2e-20
 Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +SP+  YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP S
Sbjct: 1701 YSPTPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1760

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              Y+P+ P YSP+S + Y+P
Sbjct: 1761 PVYTPTSPKYSPTSPT-YSP 1779

 Score =  100 bits (248), Expect = 1e-19
 Identities = 50/87 (57%), Positives = 67/87 (77%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGTSPDYSPSS 420
            +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP       N   +P YSPSS
Sbjct: 1652 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSS 1711

Query: 419  PQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P+++P S  YSP+ P YSP+S  +Y+P
Sbjct: 1712 PEYTPTSPKYSPTSPKYSPTS-PKYSP 1737

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 49/81 (60%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPT PSYSP+SP Y+PTSP YSP+SP YSP+SP  S TSP YSP++P++SP 
Sbjct: 1694 YTPMSPNYSPT-PSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1752

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P Y+P+S  +Y+P
Sbjct: 1753 SPTYSPTSPVYTPTS-PKYSP 1772

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 16/94 (17%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
            +P +     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  S TS
Sbjct: 1499 TPGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1558

Query: 440  PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1559 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1591

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1748 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1807

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1808 YSPTSPTYSLTSPAISPDDSDE 1829

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 53/88 (60%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       P+YSPT PSYSP+SP Y+P+SP YSP+SP  S TSP YSP+
Sbjct: 1680 YSPTSPSYSPTSPNYTPMSPNYSPT-PSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1738

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SP+T  YSP+ P YSP+S   YTP
Sbjct: 1739 SPTYSPTTPKYSPTSPTYSPTS-PVYTP 1765

[76][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 17 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B26
          Length = 1684

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1524 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1583

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1584 SPSYSPTSPSYSPTSPS-YSP 1603

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1531 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1590

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1591 SPSYSPTSPSYSPTSPS-YSP 1610

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1612 SPSYSPTSPSYSPTSPS-YSP 1631

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1559 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1619 SPSYSPTSPSYSPTSPS-YSP 1638

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1633 SPSYSPTSPNYSPSRPN-YTP 1652

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S +    + N     P
Sbjct: 1626 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1655

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1646

Query: 401  -TGYSPSQPGYSPSSTSQYTP 342
               Y+P+ P YSP+S S Y+P
Sbjct: 1647 RPNYTPTSPSYSPTSPS-YSP 1666

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSPS P ++P 
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1653

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1654 SPSYSPTSPSYSPTSPN-YTP 1673

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1503 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1562

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1563 SPSYSPTSPSYSPTSPS-YSP 1582

 Score =  110 bits (276), Expect = 6e-23
 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P  + TSP YSP+SP +SP 
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSS 360
            S  Y+P  P YSP+S
Sbjct: 1668 SPNYTPMSPNYSPTS 1682

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 9/79 (11%)
 Frame = -2

Query: 551  TSPSYS--------PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            TSP+Y         P SPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1491 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1550

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1551 SYSPTSPSYSPTSPS-YSP 1568

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP  +  SP+YSP+SP
Sbjct: 1629 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1683

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
            +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP  S TSP+
Sbjct: 1636 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1684

[77][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 16 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B25
          Length = 1752

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1524 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1583

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1584 SPSYSPTSPSYSPTSPS-YSP 1603

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1531 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1590

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1591 SPSYSPTSPSYSPTSPS-YSP 1610

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1612 SPSYSPTSPSYSPTSPS-YSP 1631

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1633 SPSYSPTSPNYSPSRPN-YTP 1652

 Score =  116 bits (291), Expect = 1e-24
 Identities = 58/92 (63%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1646

Query: 401  -TGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
               Y+P+ P YSP+S S Y+P + +    P +
Sbjct: 1647 RPNYTPTSPSYSPTSPS-YSPTSPNYTYSPSS 1677

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1503 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1562

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1563 SPSYSPTSPSYSPTSPS-YSP 1582

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/84 (66%), Positives = 68/84 (80%), Gaps = 5/84 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P  + TSP YSP+SP +SP+
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1667

Query: 401  T---GYSPSQPGYSPSSTS-QYTP 342
            +    YSPS P YSP+S + +Y+P
Sbjct: 1668 SPNYTYSPSSPSYSPTSPNPKYSP 1691

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 56/89 (62%), Positives = 68/89 (76%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPD--YSPSSPQ 414
            +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP  TYSPSSP  S TSP+  YSP+SP 
Sbjct: 1636 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPN 1695

Query: 413  --FSP-STGYSPSQPGYSPSST--SQYTP 342
              +SP S  YSP+ P YSP+S   S Y+P
Sbjct: 1696 PTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1724

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 50/87 (57%), Positives = 66/87 (75%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP--YNSGTSPDYSPSSPQ-- 414
            +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP    S +SP YSP+SP   
Sbjct: 1629 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPK 1688

Query: 413  ---FSPSTGYSPSQPGYSPSSTSQYTP 342
                SP+  YSP+ P YSP+S + Y+P
Sbjct: 1689 YSPTSPNPTYSPTSPKYSPTSPT-YSP 1714

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 14/101 (13%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY--SPTSPSYSPSSP-----------TYSPSSPYNSGTS 441
            ++P+SP YSPTSPSYSPTSP+Y  SP+SPSYSP+SP           TYSP+SP  S TS
Sbjct: 1650 YTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTSPKYSPTS 1709

Query: 440  PDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            P YSP+SP+ S    YSP+ PGYSP+S +        + DD
Sbjct: 1710 PTYSPTSPKGST---YSPTSPGYSPTSPTYSLTSPAISPDD 1747

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 9/79 (11%)
 Frame = -2

Query: 551  TSPSYS--------PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            TSP+Y         P SPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1491 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1550

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1551 SYSPTSPSYSPTSPS-YSP 1568

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 11/87 (12%)
 Frame = -2

Query: 578  FSPSSP---YSPTSPSYSPTSPS--YSPTSPS--YSPSSPTYSPSSPYNSGTSP---DYS 429
            +SP+SP   YSP+SPSYSPTSP+  YSPTSP+  YSP+SP YSP+SP  S TSP    YS
Sbjct: 1664 YSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTSPKYSPTSPTYSPTSPKGSTYS 1723

Query: 428  PSSPQFSP-STGYSPSQPGYSPSSTSQ 351
            P+SP +SP S  YS + P  SP  + +
Sbjct: 1724 PTSPGYSPTSPTYSLTSPAISPDDSDE 1750

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 38/62 (61%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSP---TYSPSSPYNSGTSPDYSPSSPQF 411
            ++SP+SP     P+YSPTSP YSPTSP+YSP+SP   TYSP+SP  S TSP YS +SP  
Sbjct: 1688 KYSPTSPN----PTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1743

Query: 410  SP 405
            SP
Sbjct: 1744 SP 1745

[78][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B24
          Length = 1924

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1630 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1689

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1690 SPSYSPTSPSYSPTSPS-YSP 1709

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1637 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1696

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1697 SPSYSPTSPSYSPTSPS-YSP 1716

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1658 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1717

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1718 SPSYSPTSPSYSPTSPS-YSP 1737

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1679 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1738

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1739 SPSYSPTSPNYSPSRPN-YTP 1758

 Score =  116 bits (291), Expect = 1e-24
 Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1693 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1752

Query: 401  -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315
               Y+P+ P YSP+S S       YTP + +    P
Sbjct: 1753 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1788

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1609 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1668

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1669 SPSYSPTSPSYSPTSPS-YSP 1688

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1813 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1872

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1873 TSPKYSPTSPTYSPTSPKGSTYSP 1896

 Score =  109 bits (272), Expect = 2e-22
 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1721 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1780

Query: 404  ---------STGYSPSQPGYSPSSTSQYTP 342
                     S  Y+P+ P YSPSS  +YTP
Sbjct: 1781 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1809

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1800 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1859

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1860 SPKYSPTSPTYSPTS-PKYSP 1879

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1827 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1886

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1887 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1919

 Score =  103 bits (258), Expect = 7e-21
 Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408
            +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+  SP  + TSP YSPSSP+++
Sbjct: 1749 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1808

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S  +Y+P
Sbjct: 1809 PTSPKYSPTSPKYSPTS-PKYSP 1830

 Score =  102 bits (253), Expect = 3e-20
 Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP  S TSP YSP++P++SP S
Sbjct: 1787 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1846

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P Y+P+S  +Y+P
Sbjct: 1847 PTYSPTSPVYTPTS-PKYSP 1865

 Score =  101 bits (251), Expect = 5e-20
 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP Y+P SP+YSPT  SP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++S
Sbjct: 1770 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1829

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S + Y+P
Sbjct: 1830 PTSPTYSPTTPKYSPTSPT-YSP 1851

 Score =  100 bits (250), Expect = 6e-20
 Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399
            SP+   +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP  S TSP YSP+SP +SP+T 
Sbjct: 1781 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1840

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S   YTP
Sbjct: 1841 KYSPTSPTYSPTS-PVYTP 1858

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1578 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1637

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1638 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1674

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1841 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1900

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1901 YSPTSPTYSLTSPAISPDDSDE 1922

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1547 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1599

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1600 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1625

[79][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 14 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B23
          Length = 1653

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1493 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1552

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1553 SPSYSPTSPSYSPTSPS-YSP 1572

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1500 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1559

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1560 SPSYSPTSPSYSPTSPS-YSP 1579

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1521 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1580

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1581 SPSYSPTSPSYSPTSPS-YSP 1600

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1528 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1587

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1588 SPSYSPTSPSYSPTSPS-YSP 1607

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1542 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1602 SPSYSPTSPNYSPSRPN-YTP 1621

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1535 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S +    + N     P
Sbjct: 1595 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1624

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1615

Query: 401  -TGYSPSQPGYSPSSTSQYTP 342
               Y+P+ P YSP+S S Y+P
Sbjct: 1616 RPNYTPTSPSYSPTSPS-YSP 1635

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSPS P ++P 
Sbjct: 1563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1622

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1623 SPSYSPTSPSYSPTSPN-YTP 1642

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1472 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1531

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1532 SPSYSPTSPSYSPTSPS-YSP 1551

 Score =  110 bits (276), Expect = 6e-23
 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P  + TSP YSP+SP +SP 
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1636

Query: 404  STGYSPSQPGYSPSS 360
            S  Y+P  P YSP+S
Sbjct: 1637 SPNYTPMSPNYSPTS 1651

 Score =  102 bits (254), Expect = 2e-20
 Identities = 55/92 (59%), Positives = 62/92 (67%), Gaps = 16/92 (17%)
 Frame = -2

Query: 569  SSPYSPTS---------------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
            S  YSPTS               PSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP 
Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1513

Query: 434  YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1544

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP  +  SP+YSP+SP
Sbjct: 1598 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1652

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
            +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP  S TSP+
Sbjct: 1605 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1653

[80][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B21
          Length = 1922

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1716 SPSYSPTSPSYSPTSPS-YSP 1735

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1737 SPSYSPTSPNYSPSRPN-YTP 1756

 Score =  116 bits (291), Expect = 1e-24
 Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1750

Query: 401  -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315
               Y+P+ P YSP+S S       YTP + +    P
Sbjct: 1751 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1786

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1811 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1870

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1871 TSPKYSPTSPTYSPTSPKGSTYSP 1894

 Score =  109 bits (272), Expect = 2e-22
 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1719 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1778

Query: 404  ---------STGYSPSQPGYSPSSTSQYTP 342
                     S  Y+P+ P YSPSS  +YTP
Sbjct: 1779 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1807

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1798 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1857

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1858 SPKYSPTSPTYSPTS-PKYSP 1877

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1825 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1884

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1885 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1917

 Score =  103 bits (258), Expect = 7e-21
 Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408
            +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+  SP  + TSP YSPSSP+++
Sbjct: 1747 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1806

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S  +Y+P
Sbjct: 1807 PTSPKYSPTSPKYSPTS-PKYSP 1828

 Score =  102 bits (253), Expect = 3e-20
 Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP  S TSP YSP++P++SP S
Sbjct: 1785 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1844

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P Y+P+S  +Y+P
Sbjct: 1845 PTYSPTSPVYTPTS-PKYSP 1863

 Score =  101 bits (251), Expect = 5e-20
 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP Y+P SP+YSPT  SP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++S
Sbjct: 1768 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1827

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S + Y+P
Sbjct: 1828 PTSPTYSPTTPKYSPTSPT-YSP 1849

 Score =  100 bits (250), Expect = 6e-20
 Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399
            SP+   +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP  S TSP YSP+SP +SP+T 
Sbjct: 1779 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1838

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S   YTP
Sbjct: 1839 KYSPTSPTYSPTS-PVYTP 1856

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1839 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1898

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1899 YSPTSPTYSLTSPAISPDDSDE 1920

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1545 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1597

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1598 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1623

[81][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B20
          Length = 1923

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1738 SPSYSPTSPNYSPSRPN-YTP 1757

 Score =  116 bits (291), Expect = 1e-24
 Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1751

Query: 401  -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315
               Y+P+ P YSP+S S       YTP + +    P
Sbjct: 1752 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1787

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1812 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1871

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1872 TSPKYSPTSPTYSPTSPKGSTYSP 1895

 Score =  109 bits (272), Expect = 2e-22
 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1779

Query: 404  ---------STGYSPSQPGYSPSSTSQYTP 342
                     S  Y+P+ P YSPSS  +YTP
Sbjct: 1780 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1808

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1799 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1858

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1859 SPKYSPTSPTYSPTS-PKYSP 1878

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1826 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1885

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1886 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1918

 Score =  103 bits (258), Expect = 7e-21
 Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408
            +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+  SP  + TSP YSPSSP+++
Sbjct: 1748 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1807

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S  +Y+P
Sbjct: 1808 PTSPKYSPTSPKYSPTS-PKYSP 1829

 Score =  102 bits (253), Expect = 3e-20
 Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP  S TSP YSP++P++SP S
Sbjct: 1786 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1845

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P Y+P+S  +Y+P
Sbjct: 1846 PTYSPTSPVYTPTS-PKYSP 1864

 Score =  101 bits (251), Expect = 5e-20
 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP Y+P SP+YSPT  SP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++S
Sbjct: 1769 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1828

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S + Y+P
Sbjct: 1829 PTSPTYSPTTPKYSPTSPT-YSP 1850

 Score =  100 bits (250), Expect = 6e-20
 Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399
            SP+   +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP  S TSP YSP+SP +SP+T 
Sbjct: 1780 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1839

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S   YTP
Sbjct: 1840 KYSPTSPTYSPTS-PVYTP 1857

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1840 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1899

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1900 YSPTSPTYSLTSPAISPDDSDE 1921

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624

[82][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 10 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B1F
          Length = 1840

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1562 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1621

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1622 SPSYSPTSPSYSPTSPS-YSP 1641

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1569 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1628

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1629 SPSYSPTSPSYSPTSPS-YSP 1648

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1590 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1649

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1650 SPSYSPTSPSYSPTSPS-YSP 1669

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1597 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1657 SPSYSPTSPSYSPTSPS-YSP 1676

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1611 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1670

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1671 SPSYSPTSPNYSPSRPN-YTP 1690

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1604 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S +    + N     P
Sbjct: 1664 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1693

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1684

Query: 401  -TGYSPSQPGYSPSSTSQYTP 342
               Y+P+ P YSP+S S Y+P
Sbjct: 1685 RPNYTPTSPSYSPTSPS-YSP 1704

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P  + TSP YSP+SP +SP 
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1705

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1706 SPKYTPTSPSYSPSS-PEYTP 1725

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1541 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1600

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1601 SPSYSPTSPSYSPTSPS-YSP 1620

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1729 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1788

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1789 TSPKYSPTSPTYSPTSPKGSTYSP 1812

 Score =  109 bits (273), Expect = 1e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1688 YTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1747

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1748 SPTYSPTTPKYSPTSPT-YSP 1767

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1716 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1775

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1776 SPKYSPTSPTYSPTS-PKYSP 1795

 Score =  107 bits (267), Expect = 7e-22
 Identities = 51/81 (62%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1667 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1726

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1727 SPKYSPTSPKYSPTS-PKYSP 1746

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1743 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1802

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1803 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1835

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1708 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1767

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1768 TSPVYTPTSPKYSPTSPT-YSP 1788

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP       +YSPSSP  + TSP YSP+
Sbjct: 1674 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPT 1733

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP++SP S  YSP+ P YSP +T +Y+P
Sbjct: 1734 SPKYSPTSPKYSPTSPTYSP-TTPKYSP 1760

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1757 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1816

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1817 YSPTSPTYSLTSPAISPDDSDE 1838

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSPYSPTSP-SYSPTSPSYSPTSPSYSPSSPT--------YSPSSPYNSGTSPDYSP 426
            +SP+   +P SP S  P+SP        YSP+SP         Y+P SP  S TSP YSP
Sbjct: 1498 YSPAWSPTPGSPGSPGPSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSP 1557

Query: 425  SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1558 TSPSYSPTSPNYSPTSPSYSPTSPS-YSP 1585

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
 Frame = -2

Query: 548  SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPG 375
            SP YSP   ++SPT  S  P SP   PSSPY       YSP+SP + P +  GY+P  P 
Sbjct: 1495 SPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPS 1547

Query: 374  YSPSSTSQYTP 342
            YSP+S S Y+P
Sbjct: 1548 YSPTSPS-YSP 1557

[83][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 9 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B1E
          Length = 1851

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1566 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPSYSPTSPS-YSP 1652

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1661 SPSYSPTSPSYSPTSPS-YSP 1680

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1675 SPSYSPTSPNYSPSRPN-YTP 1694

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S +    + N     P
Sbjct: 1668 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1697

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/83 (68%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1688

Query: 401  -TGYSPSQPGYSPSSTSQYTPKT 336
               Y+P+ P YSP+S S Y+P +
Sbjct: 1689 RPNYTPTSPSYSPTSPS-YSPSS 1710

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP  S TSP YSPSSP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1717 SPKYTPTSPSYSPSS-PEYTP 1736

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1545 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1605 SPSYSPTSPSYSPTSPS-YSP 1624

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1740 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1799

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1800 TSPKYSPTSPTYSPTSPKGSTYSP 1823

 Score =  109 bits (273), Expect = 1e-22
 Identities = 53/81 (65%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1678 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1738 SPKYSPTSPKYSPTS-PKYSP 1757

 Score =  109 bits (273), Expect = 1e-22
 Identities = 53/81 (65%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP 
Sbjct: 1692 YTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1751

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP +T +Y+P
Sbjct: 1752 SPKYSPTSPTYSP-TTPKYSP 1771

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1727 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1786

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1787 SPKYSPTSPTYSPTS-PKYSP 1806

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1754 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1813

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1814 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1846

 Score =  104 bits (259), Expect = 6e-21
 Identities = 50/81 (61%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP  S TSP YSP++P++SP 
Sbjct: 1713 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1772

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P Y+P+S  +Y+P
Sbjct: 1773 SPTYSPTSPVYTPTS-PKYSP 1792

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S + P+Y+P+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1695

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S  YSPS P YSP+S  +YTP
Sbjct: 1696 SPSYSPTSPSYSPSSPSYSPTS-PKYTP 1722

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1514 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1573

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1574 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1610

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1768 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1827

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1828 YSPTSPTYSLTSPAISPDDSDE 1849

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 23/92 (25%)
 Frame = -2

Query: 548  SPSYSPTSPSYSPTSPS--YSPS-----SPTYSPS---------------SPYNSGTSPD 435
            SP++SPT  S     PS  Y PS     SP+YSP+               SP  S TSP 
Sbjct: 1499 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1558

Query: 434  YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1559 YSPTSPSYSPTSPNYSPTSPSYSPTSPS-YSP 1589

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
 Frame = -2

Query: 548  SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSP 387
            SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP + P +  GY+P
Sbjct: 1495 SPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTP 1547

Query: 386  SQPGYSPSSTSQYTP 342
              P YSP+S S Y+P
Sbjct: 1548 QSPSYSPTSPS-YSP 1561

[84][TOP]
>UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 1 n=2 Tax=Canis lupus familiaris
            RepID=UPI00005A0B1D
          Length = 1764

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1604 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1664 SPSYSPTSPSYSPTSPS-YSP 1683

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1611 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1670

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1671 SPSYSPTSPSYSPTSPS-YSP 1690

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1632 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1691

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1692 SPSYSPTSPSYSPTSPS-YSP 1711

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1639 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1698

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1699 SPSYSPTSPSYSPTSPS-YSP 1718

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1653 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1712

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1713 SPSYSPTSPNYSPSRPN-YTP 1732

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S +    + N     P
Sbjct: 1706 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1735

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1726

Query: 401  -TGYSPSQPGYSPSSTSQYTP 342
               Y+P+ P YSP+S S Y+P
Sbjct: 1727 RPNYTPTSPSYSPTSPS-YSP 1746

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSPS P ++P 
Sbjct: 1674 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1733

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1734 SPSYSPTSPSYSPTSPN-YTP 1753

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1583 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1642

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1643 SPSYSPTSPSYSPTSPS-YSP 1662

 Score =  110 bits (276), Expect = 6e-23
 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P  + TSP YSP+SP +SP 
Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1747

Query: 404  STGYSPSQPGYSPSS 360
            S  Y+P  P YSP+S
Sbjct: 1748 SPNYTPMSPNYSPTS 1762

 Score =  102 bits (254), Expect = 2e-20
 Identities = 55/92 (59%), Positives = 62/92 (67%), Gaps = 16/92 (17%)
 Frame = -2

Query: 569  SSPYSPTS---------------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
            S  YSPTS               PSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP 
Sbjct: 1565 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1624

Query: 434  YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1655

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP  +  SP+YSP+SP
Sbjct: 1709 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1763

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
            +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP  S TSP+
Sbjct: 1716 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1764

[85][TOP]
>UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 8 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B1C
          Length = 1719

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1559 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1619 SPSYSPTSPSYSPTSPS-YSP 1638

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1647 SPSYSPTSPSYSPTSPS-YSP 1666

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1668 SPSYSPTSPNYSPSRPN-YTP 1687

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S +    + N     P
Sbjct: 1661 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1690

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1681

Query: 401  -TGYSPSQPGYSPSSTSQYTP 342
               Y+P+ P YSP+S S Y+P
Sbjct: 1682 RPNYTPTSPSYSPTSPS-YSP 1701

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSPS P ++P 
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1689 SPSYSPTSPSYSPTSPN-YTP 1708

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1538 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1598 SPSYSPTSPSYSPTSPS-YSP 1617

 Score =  110 bits (276), Expect = 6e-23
 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P  + TSP YSP+SP +SP 
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1702

Query: 404  STGYSPSQPGYSPSS 360
            S  Y+P  P YSP+S
Sbjct: 1703 SPNYTPMSPNYSPTS 1717

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1507 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1566

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1567 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP  +  SP+YSP+SP
Sbjct: 1664 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1718

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
            +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP  S TSP+
Sbjct: 1671 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1719

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 24/100 (24%)
 Frame = -2

Query: 569  SSPYSPT-SPSYSPTSPSYSPTSPS--YSPS-----SPTYSPS---------------SP 459
            +S +SP  SP++SPT  S     PS  Y PS     SP+YSP+               SP
Sbjct: 1484 ASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSP 1543

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
              S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1544 SYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS-YSP 1582

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
 Frame = -2

Query: 554  PTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--G 396
            P +  +SP  SP++SPT  S  P SP   PSSPY        SP YSP+SP + P +  G
Sbjct: 1482 PDASGFSPGYSPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGG 1537

Query: 395  YSPSQPGYSPSSTSQYTP 342
            Y+P  P YSP+S S Y+P
Sbjct: 1538 YTPQSPSYSPTSPS-YSP 1554

[86][TOP]
>UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 7 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B1B
          Length = 1858

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1559 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1619 SPSYSPTSPSYSPTSPS-YSP 1638

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1647 SPSYSPTSPSYSPTSPS-YSP 1666

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1668 SPSYSPTSPNYSPSRPN-YTP 1687

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S +    + N     P
Sbjct: 1661 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1690

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1681

Query: 401  -TGYSPSQPGYSPSSTSQYTP 342
               Y+P+ P YSP+S S Y+P
Sbjct: 1682 RPNYTPTSPSYSPTSPS-YSP 1701

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSPS P ++P 
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1689 SPSYSPTSPSYSPTSPN-YTP 1708

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1538 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1598 SPSYSPTSPSYSPTSPS-YSP 1617

 Score =  113 bits (282), Expect = 1e-23
 Identities = 56/81 (69%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P  + TSP YSP+SP +SP 
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1702

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P  P YSP+S S Y+P
Sbjct: 1703 SPNYTPMSPNYSPTSPS-YSP 1722

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1747 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1806

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1807 TSPKYSPTSPTYSPTSPKGSTYSP 1830

 Score =  108 bits (271), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1706 YTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1765

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1766 SPTYSPTTPKYSPTSPT-YSP 1785

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1734 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1793

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1794 SPKYSPTSPTYSPTS-PKYSP 1813

 Score =  107 bits (268), Expect = 5e-22
 Identities = 52/81 (64%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP Y+P SP+YSPTSPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP 
Sbjct: 1699 YSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP +T +Y+P
Sbjct: 1759 SPKYSPTSPTYSP-TTPKYSP 1778

 Score =  107 bits (267), Expect = 7e-22
 Identities = 51/81 (62%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP  +  SP+YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1724 SPKYTPTSPSYSPSS-PEYTP 1743

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+SP  S TSP Y+P+SP +SPS
Sbjct: 1678 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPS 1737

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            +  Y+P+ P YSP+S  +Y+P
Sbjct: 1738 SPEYTPTSPKYSPTS-PKYSP 1757

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1761 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1820

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1821 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1853

 Score =  106 bits (265), Expect = 1e-21
 Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP  S TSP YSP+SP+++P 
Sbjct: 1671 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPT 1730

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSPS P Y+P+S  +Y+P
Sbjct: 1731 SPSYSPSSPEYTPTS-PKYSP 1750

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1726 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1785

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1786 TSPVYTPTSPKYSPTSPT-YSP 1806

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1507 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1566

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1567 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1775 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1834

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1835 YSPTSPTYSLTSPAISPDDSDE 1856

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 24/100 (24%)
 Frame = -2

Query: 569  SSPYSPT-SPSYSPTSPSYSPTSPS--YSPS-----SPTYSPS---------------SP 459
            +S +SP  SP++SPT  S     PS  Y PS     SP+YSP+               SP
Sbjct: 1484 ASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSP 1543

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
              S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1544 SYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS-YSP 1582

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
 Frame = -2

Query: 554  PTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--G 396
            P +  +SP  SP++SPT  S  P SP   PSSPY        SP YSP+SP + P +  G
Sbjct: 1482 PDASGFSPGYSPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGG 1537

Query: 395  YSPSQPGYSPSSTSQYTP 342
            Y+P  P YSP+S S Y+P
Sbjct: 1538 YTPQSPSYSPTSPS-YSP 1554

[87][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B1A
          Length = 1767

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1607 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1674 SPSYSPTSPSYSPTSPS-YSP 1693

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSP 1721

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1716 SPSYSPTSPNYSPSRPN-YTP 1735

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S +    + N     P
Sbjct: 1709 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1738

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1729

Query: 401  -TGYSPSQPGYSPSSTSQYTP 342
               Y+P+ P YSP+S S Y+P
Sbjct: 1730 RPNYTPTSPSYSPTSPS-YSP 1749

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSPS P ++P 
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1736

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1737 SPSYSPTSPSYSPTSPN-YTP 1756

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1586 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1645

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1646 SPSYSPTSPSYSPTSPS-YSP 1665

 Score =  110 bits (276), Expect = 6e-23
 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P  + TSP YSP+SP +SP 
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1750

Query: 404  STGYSPSQPGYSPSS 360
            S  Y+P  P YSP+S
Sbjct: 1751 SPNYTPMSPNYSPTS 1765

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP  +  SP+YSP+SP
Sbjct: 1712 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1766

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
            +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP  S TSP+
Sbjct: 1719 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1767

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 44/86 (51%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
 Frame = -2

Query: 572  PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPT--------YSPSSPYNSGTSPDYSPSSP 417
            PSSPY P     SP   S    SPSYSP+SP         Y+P SP  S TSP YSP+SP
Sbjct: 1551 PSSPYIP-----SPGELSCGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSP 1605

Query: 416  QFSP-STGYSPSQPGYSPSSTSQYTP 342
             +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1606 SYSPTSPNYSPTSPSYSPTSPS-YSP 1630

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGTSPDYSPSSPQFS- 408
            +SP S  +P +  +SP++ S  S  SP YSP+ SPT  P SP + G S  Y PS  + S 
Sbjct: 1507 WSPRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPSPGELSC 1564

Query: 407  --PSTGYSPSQPGYSPSSTSQYTPKT 336
               S  YSP+ P Y P S   YTP++
Sbjct: 1565 GAMSPSYSPTSPAYEPRSPGGYTPQS 1590

[88][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
            A isoform 5 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B19
          Length = 1693

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1533 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1592

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1593 SPSYSPTSPSYSPTSPS-YSP 1612

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1540 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1599

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1600 SPSYSPTSPSYSPTSPS-YSP 1619

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1561 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1620

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1621 SPSYSPTSPSYSPTSPS-YSP 1640

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1568 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1627

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1628 SPSYSPTSPSYSPTSPS-YSP 1647

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1582 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1641

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1642 SPSYSPTSPNYSPSRPN-YTP 1661

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1575 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1634

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S +    + N     P
Sbjct: 1635 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1664

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1596 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1655

Query: 401  -TGYSPSQPGYSPSSTSQYTP 342
               Y+P+ P YSP+S S Y+P
Sbjct: 1656 RPNYTPTSPSYSPTSPS-YSP 1675

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSPS P ++P 
Sbjct: 1603 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1662

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1663 SPSYSPTSPSYSPTSPN-YTP 1682

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1512 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1571

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1572 SPSYSPTSPSYSPTSPS-YSP 1591

 Score =  110 bits (276), Expect = 6e-23
 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P  + TSP YSP+SP +SP 
Sbjct: 1617 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1676

Query: 404  STGYSPSQPGYSPSS 360
            S  Y+P  P YSP+S
Sbjct: 1677 SPNYTPMSPNYSPTS 1691

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 16/94 (17%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
            +P +     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  S TS
Sbjct: 1485 TPGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1544

Query: 440  PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1545 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1577

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP  +  SP+YSP+SP
Sbjct: 1638 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1692

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
            +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP  S TSP+
Sbjct: 1645 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1693

[89][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B17
          Length = 1788

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1716 SPSYSPTSPSYSPTSPS-YSP 1735

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1723 SPSYSPTSPSYSPTSPS-YSP 1742

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1737 SPSYSPTSPNYSPSRPN-YTP 1756

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S +    + N     P
Sbjct: 1730 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1759

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1750

Query: 401  -TGYSPSQPGYSPSSTSQYTP 342
               Y+P+ P YSP+S S Y+P
Sbjct: 1751 RPNYTPTSPSYSPTSPS-YSP 1770

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSPS P ++P 
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1757

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1758 SPSYSPTSPSYSPTSPN-YTP 1777

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686

 Score =  110 bits (276), Expect = 6e-23
 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P  + TSP YSP+SP +SP 
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1771

Query: 404  STGYSPSQPGYSPSS 360
            S  Y+P  P YSP+S
Sbjct: 1772 SPNYTPMSPNYSPTS 1786

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP  +  SP+YSP+SP
Sbjct: 1733 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1787

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
            +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP  S TSP+
Sbjct: 1740 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1788

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1545 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1597

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1598 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1623

[90][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
            (RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
            RepID=UPI00005A0B16
          Length = 1922

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1716 SPSYSPTSPSYSPTSPS-YSP 1735

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1737 SPSYSPTSPNYSPSRPN-YTP 1756

 Score =  116 bits (291), Expect = 1e-24
 Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1750

Query: 401  -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315
               Y+P+ P YSP+S S       YTP + +    P
Sbjct: 1751 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1786

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1811 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1870

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1871 TSPKYSPTSPTYSPTSPKGSTYSP 1894

 Score =  109 bits (272), Expect = 2e-22
 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1719 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1778

Query: 404  ---------STGYSPSQPGYSPSSTSQYTP 342
                     S  Y+P+ P YSPSS  +YTP
Sbjct: 1779 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1807

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1798 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1857

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1858 SPKYSPTSPTYSPTS-PKYSP 1877

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1825 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1884

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1885 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1917

 Score =  103 bits (258), Expect = 7e-21
 Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408
            +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+  SP  + TSP YSPSSP+++
Sbjct: 1747 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1806

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S  +Y+P
Sbjct: 1807 PTSPKYSPTSPKYSPTS-PKYSP 1828

 Score =  102 bits (253), Expect = 3e-20
 Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP  S TSP YSP++P++SP S
Sbjct: 1785 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1844

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P Y+P+S  +Y+P
Sbjct: 1845 PTYSPTSPVYTPTS-PKYSP 1863

 Score =  101 bits (251), Expect = 5e-20
 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP Y+P SP+YSPT  SP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++S
Sbjct: 1768 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1827

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S + Y+P
Sbjct: 1828 PTSPTYSPTTPKYSPTSPT-YSP 1849

 Score =  100 bits (250), Expect = 6e-20
 Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399
            SP+   +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP  S TSP YSP+SP +SP+T 
Sbjct: 1779 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1838

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S   YTP
Sbjct: 1839 KYSPTSPTYSPTS-PVYTP 1856

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1839 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1898

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1899 YSPTSPTYSLTSPAISPDDSDE 1920

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1545 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1597

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1598 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1623

[91][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis lupus
            familiaris RepID=UPI0001951285
          Length = 1969

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743

 Score =  117 bits (292), Expect = 8e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPS  + YTP
Sbjct: 1738 SPSYSPTSPNYSPSRPN-YTP 1757

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S +    + N     P
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1760

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1751

Query: 401  -TGYSPSQPGYSPSSTSQYTP 342
               Y+P+ P YSP+S S Y+P
Sbjct: 1752 RPNYTPTSPSYSPTSPS-YSP 1771

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSPS P ++P 
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687

 Score =  111 bits (278), Expect = 4e-23
 Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P  + TSP YSP+SP +SP 
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1772

Query: 404  STGYSPSQPGYSPSSTSQYT 345
            S  Y+P  P YSP+S +  T
Sbjct: 1773 SPNYTPMSPNYSPTSPNSPT 1792

 Score =  110 bits (276), Expect = 6e-23
 Identities = 52/80 (65%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +SP+SP SPTSPSYSPTSPSYSP+SP Y+P SPTY+PSSP  S +SP YSP+SP+++P S
Sbjct: 1783 YSPTSPNSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTS 1842

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSPS P Y+P+S  +Y+P
Sbjct: 1843 PSYSPSSPEYTPTS-PKYSP 1861

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1858 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1917

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1918 TSPKYSPTSPTYSPTSPKGSTYSP 1941

 Score =  110 bits (274), Expect = 1e-22
 Identities = 56/96 (58%), Positives = 68/96 (70%), Gaps = 15/96 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP  S TSP YSP+SP ++P 
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1779

Query: 404  -------------STGYSPSQPGYSPSSTSQYTPKT 336
                         S  YSP+ P YSPSS  +YTP++
Sbjct: 1780 SPNYSPTSPNSPTSPSYSPTSPSYSPSS-PRYTPQS 1814

 Score =  109 bits (273), Expect = 1e-22
 Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+SP NS TSP YSP+SP +SPS
Sbjct: 1748 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP-NSPTSPSYSPTSPSYSPS 1806

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         Y+PS P YSPSS S Y+P
Sbjct: 1807 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1833

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 1817 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1876

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1877 SPTYSPTTPKYSPTSPT-YSP 1896

 Score =  108 bits (270), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 1809 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1868

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1869 TSPKYSPTSPTYSP-TTPKYSP 1889

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 1845 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1904

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  +Y+P
Sbjct: 1905 SPKYSPTSPTYSPTS-PKYSP 1924

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1872 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1931

Query: 404  S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +    + YSP+ PGYSP+S +        + DD
Sbjct: 1932 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1964

 Score =  105 bits (261), Expect = 3e-21
 Identities = 50/83 (60%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP Y+P SP+Y+P+SPSYSP+SPSYSP+SP Y+P+SP  S +SP+Y+P+SP++SP 
Sbjct: 1803 YSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPT 1862

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSP+S + Y+P T
Sbjct: 1863 SPKYSPTSPKYSPTSPT-YSPTT 1884

 Score =  104 bits (259), Expect = 6e-21
 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSP+ SPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 1776 YTPMSPNYSPTSPN-SPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1834

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1835 SPKYTPTSPSYSPSS-PEYTP 1854

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 1837 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1896

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+ P YSP+S + Y+P
Sbjct: 1897 TSPVYTPTSPKYSPTSPT-YSP 1917

 Score =  100 bits (249), Expect = 8e-20
 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+SP  
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673

 Score =  100 bits (248), Expect = 1e-19
 Identities = 50/83 (60%), Positives = 65/83 (78%), Gaps = 5/83 (6%)
 Frame = -2

Query: 575  SPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            SP+SP     SPTSPSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+SP +S
Sbjct: 1787 SPNSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYS 1846

Query: 407  PST-GYSPSQPGYSPSSTSQYTP 342
            PS+  Y+P+ P YSP+S  +Y+P
Sbjct: 1847 PSSPEYTPTSPKYSPTS-PKYSP 1868

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1886 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1945

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1946 YSPTSPTYSLTSPAISPDDSDE 1967

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624

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>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
            RepID=C3ZES3_BRAFL
          Length = 1934

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/86 (67%), Positives = 71/86 (82%), Gaps = 2/86 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+Y+P+SP++SP 
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDN 327
            S  YSP+ P YSP+S S Y+P    N
Sbjct: 1759 SPSYSPTSPSYSPASPS-YSPTILSN 1783

 Score =  115 bits (287), Expect = 3e-24
 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P Y+P+S  +Y+P
Sbjct: 1738 SPSYSPTSPNYTPTS-PKYSP 1757

 Score =  114 bits (285), Expect = 5e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSP SP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1615 YSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694

 Score =  111 bits (278), Expect = 4e-23
 Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +P SP YSPTSPSYSPTSPSYSP SP+YSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1609 TPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687

 Score =  103 bits (258), Expect = 7e-21
 Identities = 51/85 (60%), Positives = 65/85 (76%), Gaps = 4/85 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSS  YSP SPSYSP++P Y+PTSP YSP+SPTY+P+SP  S TSP Y+P +P++SP 
Sbjct: 1822 YSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPT 1881

Query: 404  STGYSPSQPGYSPSST--SQYTPKT 336
            S  YSP+ P YSP+S   S Y+P T
Sbjct: 1882 SPKYSPTSPTYSPTSPKGSTYSPTT 1906

 Score =  103 bits (256), Expect = 1e-20
 Identities = 49/87 (56%), Positives = 69/87 (79%), Gaps = 1/87 (1%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP SP+Y+PTSP YSPTSPSY+P +P YSP+SP  S TSP YSP+SP+ S 
Sbjct: 1842 KYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGST 1901

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNK 324
               YSP+ PGYSP+S + Y+P++ +++
Sbjct: 1902 ---YSPTTPGYSPASPT-YSPESPESR 1924

 Score =  102 bits (254), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SPSSP YSP+SP YSPTSP+YSP+S  YSP+SP+YSPS+P  + TSP YSP+SP ++P
Sbjct: 1800 QYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTP 1859

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P Y+P  T +Y+P
Sbjct: 1860 TSPKYSPTSPSYTP-DTPKYSP 1880

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 57/113 (50%), Positives = 68/113 (60%), Gaps = 34/113 (30%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT-------------- 444
            +SP+SP YSPTSP+Y+PTSP YSPTSPSYSP+SP+YSP+SP  S T              
Sbjct: 1734 YSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTILSNLTQLQPHLTP 1793

Query: 443  -----------SPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 342
                       SP YSPSSP++SP        S  YSP+ P YSP ST +YTP
Sbjct: 1794 VHSHVTQYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSP-STPKYTP 1845

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 59/113 (52%), Positives = 68/113 (60%), Gaps = 34/113 (30%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------PSSPTYSPSSPYNSGT 444
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYS              P+SP YSP+SP  S T
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPT 1765

Query: 443  SPDYSPSSPQFSPS-------------------TGYSPSQPGYSPSSTSQYTP 342
            SP YSP+SP +SP+                   T YSPS P YSPSS  +Y+P
Sbjct: 1766 SPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSS-PKYSP 1817

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 453
            P+SPY P+     SPSYSP SP+               YSPTSPSYSP+SP+YSP+SP  
Sbjct: 1577 PASPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNY 1636

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 56/122 (45%), Positives = 67/122 (54%), Gaps = 40/122 (32%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPT-------------------------SPSYSPSSP 480
            ++SP+SP YSPTSPSYSP SPSYSPT                         SP YSPSSP
Sbjct: 1754 KYSPTSPSYSPTSPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSSP 1813

Query: 479  TYSPSSPYNSGTSPDYSPSSPQFSPSTG--------YSPSQPGYSPSS------TSQYTP 342
             YSP+SP  S +S  YSP+SP +SPST         YSP+ P Y+P+S      +  YTP
Sbjct: 1814 KYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTP 1873

Query: 341  KT 336
             T
Sbjct: 1874 DT 1875

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 4/58 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSP---SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
            ++SP+SP YSPTSP+YSPTSP   +YSPT+P YSP+SPTYSP SP +  T  +    S
Sbjct: 1877 KYSPTSPKYSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSPESPESRATQEEEEDES 1934

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQF 411
            FSPS+    +  S +  SP++SPT  S  P SP   P+SPY        SP YSP+SP +
Sbjct: 1545 FSPSAASDASGMSPAGYSPAWSPTPGS--PGSP--GPASPYIPSPGGPMSPSYSPASPAY 1600

Query: 410  SP---------STGYSPSQPGYSPSSTSQYTP 342
             P         S GYSP+ P YSP+S S Y+P
Sbjct: 1601 MPRSPGGMTPQSPGYSPTSPSYSPTSPS-YSP 1631

[93][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
          Length = 1935

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP+YSP+SP ++P 
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1723

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + YTP
Sbjct: 1724 SPSYSPTSPSYSPTSPN-YTP 1743

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPN-YSP 1715

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1716

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1717 SPNYTPTSPSYSPTSPS-YSP 1736

 Score =  115 bits (288), Expect = 2e-24
 Identities = 55/83 (66%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+Y+PTSPSYSP+SP+YSP+SP  + TSP+YSP+SP +SP 
Sbjct: 1699 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSPSS  +YTP++
Sbjct: 1759 SPSYSPTSPSYSPSS-PRYTPQS 1780

 Score =  115 bits (287), Expect = 3e-24
 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSP-SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP SS YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1594 YSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP  + TSP YSP+SP +SP 
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1737

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1738 SPNYTPTSPNYSPTSPS-YSP 1757

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP  + +SP YSPSSP +SP 
Sbjct: 1741 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1800

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSPSS  +YTP
Sbjct: 1801 SPKYTPTSPPYSPSS-PEYTP 1820

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1713 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1772

Query: 401  T--------GYSPSQPGYSPSSTSQYTP 342
            +         Y+PS P YSPSS S Y+P
Sbjct: 1773 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1799

 Score =  111 bits (278), Expect = 4e-23
 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            ++P SP YSPTSPSYSPTSPSYSPTS +YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1573 YTPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPSYSPTSPS-YSP 1652

 Score =  110 bits (274), Expect = 1e-22
 Identities = 54/84 (64%), Positives = 66/84 (78%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +FSP+SP YSPTSP YSPT P+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 1824 KFSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1883

Query: 404  -STGYSPSQPGYSPSST--SQYTP 342
             S  YSP+ P YSP+S   S Y+P
Sbjct: 1884 TSPQYSPTSPTYSPTSPKGSTYSP 1907

 Score =  107 bits (266), Expect = 9e-22
 Identities = 52/100 (52%), Positives = 69/100 (69%), Gaps = 12/100 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPT P+YSPT+P YSPTSP+YSP+SP Y+P+SP  S TSP YSP+SPQ+SP
Sbjct: 1831 KYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSP 1890

Query: 404  S-----------TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +           + YSP+ PGYSP+S +        + DD
Sbjct: 1891 TSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1930

 Score =  105 bits (263), Expect = 2e-21
 Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            ++PSSP YSP+SPSYSPTSP Y+PTSP YSPSSP Y+P+SP  S TSP YSP+SP++SP+
Sbjct: 1783 YTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPT 1842

Query: 401  -TGYSPSQPGYSPSSTSQYTP 342
               YSP+ P YSP+S + Y+P
Sbjct: 1843 GPTYSPTTPKYSPTSPT-YSP 1862

 Score =  105 bits (262), Expect = 3e-21
 Identities = 51/82 (62%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP YSPSSP  + TSP +SP+SP++SP
Sbjct: 1775 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSP 1834

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP +T +Y+P
Sbjct: 1835 TSPKYSPTGPTYSP-TTPKYSP 1855

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/81 (60%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P 
Sbjct: 1762 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPT 1821

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  +SP+ P YSP+S  +Y+P
Sbjct: 1822 SPKFSPTSPKYSPTS-PKYSP 1841

 Score =  100 bits (248), Expect = 1e-19
 Identities = 49/89 (55%), Positives = 64/89 (71%), Gaps = 9/89 (10%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +++P+SP YSP+SP Y+PTSP +SPTSP YSP+SP YSP+ P  S T+P YSP+SP +SP
Sbjct: 1803 KYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSP 1862

Query: 404  --------STGYSPSQPGYSPSSTSQYTP 342
                    S  YSP+ P YSP+S  QY+P
Sbjct: 1863 TSPVYTPTSPKYSPTSPTYSPTS-PQYSP 1890

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++P+SP YSPTS       P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP  S +SP Y+P 
Sbjct: 1720 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1779

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP ++PS+  YSPS P YSP+S  +YTP
Sbjct: 1780 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1806

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 55/98 (56%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
            PSSPY P+     SPSYSPT               SPSYSPTSPSYSP+SP+YSP+S   
Sbjct: 1542 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSSNY 1601

Query: 452  SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1602 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1638

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
            ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 1852 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSPTSPG 1911

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            +SP S  YS + P  SP  + +
Sbjct: 1912 YSPTSPTYSLTSPAISPDDSDE 1933

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 50/88 (56%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTS       PSYSP+SP Y+P SP+Y+PSSP+YSPSSP  S TSP Y+P+
Sbjct: 1748 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1807

Query: 422  SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            SP +SPS+  Y+P+ P +SP+S  +Y+P
Sbjct: 1808 SPPYSPSSPEYTPTSPKFSPTS-PKYSP 1834

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   PSSPY        SP YSP+SP
Sbjct: 1511 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1563

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  P YSP+S S Y+P
Sbjct: 1564 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1589

[94][TOP]
>UniRef100_O96446 DNA-directed RNA polymerase n=1 Tax=Vairimorpha necatrix
            RepID=O96446_9MICR
          Length = 1605

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1502 YSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1561

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1562 SPSYSPTSPSYSPTSPS-YSP 1581

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1495 YSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1554

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1555 SPSYSPTSPSYSPTSPS-YSP 1574

 Score =  115 bits (288), Expect = 2e-24
 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SPTYSP+SP  S TSP YSP+SP +SP 
Sbjct: 1467 YSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPT 1526

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1527 SPSYSPTSPSYSPTSPS-YSP 1546

 Score =  115 bits (287), Expect = 3e-24
 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1488 YSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1547

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1548 SPSYSPTSPSYSPTSPS-YSP 1567

 Score =  112 bits (279), Expect = 3e-23
 Identities = 55/82 (67%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSP-SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R++P +S YSPTSP+YSPTSP+YSPTSP+YSP+SPTYSP+SP  S TSP YSP+SP +SP
Sbjct: 1459 RYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSP 1518

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1519 TSPSYSPTSPSYSPTSPS-YSP 1539

 Score =  107 bits (267), Expect = 7e-22
 Identities = 58/90 (64%), Positives = 67/90 (74%), Gaps = 5/90 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1509 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1568

Query: 404  STGYSPSQP---GYSPSSTSQYTPKTNDNK 324
            S  YSP+ P     SPS +  Y    ND K
Sbjct: 1569 SPSYSPTSPSYSPTSPSYSPTY---DNDEK 1595

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  Y      Y+P +  YSPTSP+YSP+SPTYSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1450 SPAYLVEGNRYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTY 1509

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1510 SPTSPSYSPTSPS-YSP 1525

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
 Frame = -2

Query: 560  YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 384
            +SP S + S +S ++SP   +Y      Y+P +   S TSP YSP+SP +SP S  YSP+
Sbjct: 1435 HSPVSENLSISSGNWSP---AYLVEGNRYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPT 1491

Query: 383  QPGYSPSSTSQYTP 342
             P YSP+S + Y+P
Sbjct: 1492 SPTYSPTSPT-YSP 1504

[95][TOP]
>UniRef100_C8Z6G2 Rpo21p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z6G2_YEAST
          Length = 1733

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSP 1628

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1651 SPSYSPTSPAYSPTSPS-YSP 1670

 Score =  116 bits (291), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            S  YSP+ P YSP+S +      + +   PG
Sbjct: 1679 SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709

 Score =  110 bits (276), Expect = 6e-23
 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            F  SSP +SPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1595 SPSYSPTSPSYSPTSPS-YSP 1614

 Score =  110 bits (274), Expect = 1e-22
 Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP     
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP----- 1708

Query: 401  TGYSPSQPGYSPSSTSQYTPKTNDNKD 321
             GYSP  P YSP    Q   K N+N++
Sbjct: 1709 -GYSPGSPAYSPKQDEQ---KHNENEN 1731

 Score =  101 bits (252), Expect = 4e-20
 Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +P+SP +  +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 450
            +SP+SP YSPTSPSYSPTSP YSP SP+YSP       +   NS
Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732

[96][TOP]
>UniRef100_C7GKZ2 Rpo21p n=2 Tax=Saccharomyces cerevisiae RepID=C7GKZ2_YEAS2
          Length = 1733

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSP 1628

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1651 SPSYSPTSPAYSPTSPS-YSP 1670

 Score =  116 bits (291), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            S  YSP+ P YSP+S +      + +   PG
Sbjct: 1679 SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709

 Score =  110 bits (276), Expect = 6e-23
 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            F  SSP +SPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1595 SPSYSPTSPSYSPTSPS-YSP 1614

 Score =  110 bits (274), Expect = 1e-22
 Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP     
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP----- 1708

Query: 401  TGYSPSQPGYSPSSTSQYTPKTNDNKD 321
             GYSP  P YSP    Q   K N+N++
Sbjct: 1709 -GYSPGSPAYSPKQDEQ---KHNENEN 1731

 Score =  101 bits (252), Expect = 4e-20
 Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +P+SP +  +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 450
            +SP+SP YSPTSPSYSPTSP YSP SP+YSP       +   NS
Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732

[97][TOP]
>UniRef100_C4VAM1 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
            RepID=C4VAM1_NOSCE
          Length = 1612

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1472 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1531

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1532 SPSYSPTSPSYSPTSPS-YSP 1551

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1493 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1552

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1553 SPSYSPTSPSYSPTSPS-YSP 1572

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/94 (60%), Positives = 68/94 (72%), Gaps = 9/94 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1573

Query: 404  -------STGYSPSQPGYSPSSTSQYTPKTNDNK 324
                   S  YSP+ P YSP+   +   K N+ K
Sbjct: 1574 SPSYSPTSLSYSPTSPSYSPTGYKKDKDKKNERK 1607

 Score =  114 bits (284), Expect = 7e-24
 Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            S S  YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1453 SASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1512

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1513 SYSPTSPSYSPTSPS-YSP 1530

 Score =  108 bits (269), Expect = 4e-22
 Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FS  SP Y   SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1444 FSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1503

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1504 SPSYSPTSPSYSPTSPS-YSP 1523

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 51/82 (62%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP  S +S  SPSY   SPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP
Sbjct: 1436 KYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1495

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S S Y+P
Sbjct: 1496 TSPSYSPTSPSYSPTSPS-YSP 1516

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390
            S YSP    +S  SPSY   SPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S  YS
Sbjct: 1435 SKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1494

Query: 389  PSQPGYSPSSTSQYTP 342
            P+ P YSP+S S Y+P
Sbjct: 1495 PTSPSYSPTSPS-YSP 1509

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
 Frame = -2

Query: 548  SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 372
            SP+Y      YSP    +S  SP+Y  +SP  S TSP YSP+SP +SP S  YSP+ P Y
Sbjct: 1427 SPAYLAEESKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1486

Query: 371  SPSSTSQYTP 342
            SP+S S Y+P
Sbjct: 1487 SPTSPS-YSP 1495

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = -2

Query: 560  YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 384
            YSP S S S +S ++SP   +Y      YSP     S  SP Y  +SP +SP S  YSP+
Sbjct: 1412 YSPVSESQSISSGNWSP---AYLAEESKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPT 1468

Query: 383  QPGYSPSSTSQYTP 342
             P YSP+S S Y+P
Sbjct: 1469 SPSYSPTSPS-YSP 1481

[98][TOP]
>UniRef100_B3LH31 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a
            RepID=B3LH31_YEAS1
          Length = 1733

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSP 1628

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1651 SPSYSPTSPAYSPTSPS-YSP 1670

 Score =  116 bits (291), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            S  YSP+ P YSP+S +      + +   PG
Sbjct: 1679 SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709

 Score =  110 bits (276), Expect = 6e-23
 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            F  SSP +SPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1595 SPSYSPTSPSYSPTSPS-YSP 1614

 Score =  110 bits (274), Expect = 1e-22
 Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP     
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP----- 1708

Query: 401  TGYSPSQPGYSPSSTSQYTPKTNDNKD 321
             GYSP  P YSP    Q   K N+N++
Sbjct: 1709 -GYSPGSPAYSPKQDEQ---KHNENEN 1731

 Score =  101 bits (251), Expect = 5e-20
 Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
 Frame = -2

Query: 572  PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            P+SP +  +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1589

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S S Y+P
Sbjct: 1590 SYSPTSPSYSPTSPS-YSP 1607

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 44/80 (55%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSPYS--PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            SP   Y   PTSP +  +SP +SPTSP+YSP+SP YSP+SP  S TSP YS      SPS
Sbjct: 1521 SPFGAYGEPPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYS----PTSPS 1576

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1577 --YSPTSPSYSPTSPS-YSP 1593

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 450
            +SP+SP YSPTSPSYSPTSP YSP SP+YSP       +   NS
Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732

[99][TOP]
>UniRef100_P04050 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Saccharomyces
            cerevisiae RepID=RPB1_YEAST
          Length = 1733

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSP 1628

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1651 SPSYSPTSPAYSPTSPS-YSP 1670

 Score =  116 bits (291), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691

 Score =  116 bits (291), Expect = 1e-24
 Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            S  YSP+ P YSP+S +      + +   PG
Sbjct: 1679 SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709

 Score =  110 bits (276), Expect = 6e-23
 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            F  SSP +SPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1595 SPSYSPTSPSYSPTSPS-YSP 1614

 Score =  110 bits (274), Expect = 1e-22
 Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP     
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP----- 1708

Query: 401  TGYSPSQPGYSPSSTSQYTPKTNDNKD 321
             GYSP  P YSP    Q   K N+N++
Sbjct: 1709 -GYSPGSPAYSPKQDEQ---KHNENEN 1731

 Score =  101 bits (252), Expect = 4e-20
 Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            +P+SP +  +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 450
            +SP+SP YSPTSPSYSPTSP YSP SP+YSP       +   NS
Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732

[100][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
            Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
          Length = 1752

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1686

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1687 SPSYSPTSPSYSPTSPS-YSP 1706

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1707

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1708 SPSYSPTSPSYSPTSPS-YSP 1727

 Score =  117 bits (293), Expect = 6e-25
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1728

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1729 SPSYSPTSPSYSPTSPS-YSP 1748

 Score =  116 bits (290), Expect = 1e-24
 Identities = 56/77 (72%), Positives = 65/77 (84%), Gaps = 2/77 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1676 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1735

Query: 404  STGYSPSQPGYSPSSTS 354
            S  YSP+ P YSP+S S
Sbjct: 1736 SPSYSPTSPSYSPTSPS 1752

 Score =  114 bits (286), Expect = 4e-24
 Identities = 58/88 (65%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP        YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+
Sbjct: 1599 YSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1659 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1685

 Score =  114 bits (285), Expect = 5e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYS TSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1585 YSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1645 SPSYSPTSPSYSPTSPS-YSP 1664

 Score =  113 bits (283), Expect = 9e-24
 Identities = 57/87 (65%), Positives = 67/87 (77%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
            +SPSSP       Y P+SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+S
Sbjct: 1558 YSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTS 1617

Query: 419  PQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1618 PSYSPTSPSYSPTSPSYSPTSPS-YSP 1643

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 48/77 (62%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-PSTGY 393
            S  YSP+SP YS TSP+Y P+SPSYSP+SP+YSP+SP  S TSP YSP+SP +S  S  Y
Sbjct: 1555 SPSYSPSSPGYS-TSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSY 1613

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S S Y+P
Sbjct: 1614 SPTSPSYSPTSPS-YSP 1629

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 50/89 (56%), Positives = 56/89 (62%), Gaps = 13/89 (14%)
 Frame = -2

Query: 569  SSPY----SP--TSPSYSPTSPSYSPTSPSYSPSSPTYS------PSSPYNSGTSPDYSP 426
            +SPY    SP  TSP  S  SP Y  TSPSYSPSSP YS      PSSP  S TSP YSP
Sbjct: 1528 ASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSP 1587

Query: 425  SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP +SP S  YSP+ P YS +S S Y+P
Sbjct: 1588 TSPSYSPTSPSYSPTSPSYSATSPS-YSP 1615

[101][TOP]
>UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
            tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR
          Length = 1706

 Score =  117 bits (292), Expect = 8e-25
 Identities = 57/89 (64%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1615 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1674

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            S  YSP+ P YSP+S + Y+P   D+K D
Sbjct: 1675 SPAYSPTSPAYSPTSPA-YSPSGGDDKKD 1702

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1517 YSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1576

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1577 SPAYSPTSPAYSPTSPA-YSP 1596

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1538 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1597

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1598 SPAYSPTSPAYSPTSPA-YSP 1617

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1559 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1618

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1619 SPAYSPTSPAYSPTSPA-YSP 1638

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1580 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1639

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1640 SPAYSPTSPAYSPTSPA-YSP 1659

 Score =  106 bits (264), Expect = 1e-21
 Identities = 51/77 (66%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1514 SPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1573

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S + Y+P
Sbjct: 1574 SPTSPAYSPTSPA-YSP 1589

 Score =  100 bits (248), Expect = 1e-19
 Identities = 54/88 (61%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YS       P+SP YSP+SP  S TSP YSP+
Sbjct: 1587 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1646

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S  YSP+ P YSP+S + Y+P
Sbjct: 1647 SPAYSPTSPAYSPTSPAYSPTSPA-YSP 1673

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            F+  S  +  SP+YSPTSP YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1504 FASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1563

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S + Y+P
Sbjct: 1564 PAYSPTSPAYSPTSPA-YSP 1582

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 18/97 (18%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSP-----------------TSPSYSPTSPSYSPSSPTYSPSSPYNS 450
            FSP+   +  SP+YSP                  SP+YSPTSP YSP+SP YSP+SP  S
Sbjct: 1480 FSPAVGAASFSPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPAYS 1539

Query: 449  GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
             TSP YSP+SP +SP S  YSP+ P YSP+S + Y+P
Sbjct: 1540 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1575

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSP-S 402
            +SP+     ++SP   + S  SP+YSP S +Y     S  Y +G SP YSP+SPQ+SP S
Sbjct: 1470 ASPFVDGGAAFSPAVGAAS-FSPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTS 1528

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S + Y+P
Sbjct: 1529 PAYSPTSPAYSPTSPA-YSP 1547

[102][TOP]
>UniRef100_Q9BMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
            RepID=Q9BMP3_MONBE
          Length = 1743

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1620 YSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPT 1679

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1680 SPSYSPTSPNYSPTSPS-YSP 1699

 Score =  116 bits (290), Expect = 1e-24
 Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP YSP+SP  S TSP+YSP+SP +SP 
Sbjct: 1655 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1714

Query: 404  --------STGYSPSQPGYSPSSTSQYTP 342
                    S GYSP+ PGYSP+S   Y+P
Sbjct: 1715 ANGTSGPTSPGYSPTSPGYSPTSPG-YSP 1742

 Score =  115 bits (288), Expect = 2e-24
 Identities = 58/91 (63%), Positives = 69/91 (75%), Gaps = 9/91 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP YSP+SP  S TSP+YSP+SP +SP 
Sbjct: 1627 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1686

Query: 404  -------STGYSPSQPGYSPSSTSQYTPKTN 333
                   S  YSP+ P YSP+S S Y+P  N
Sbjct: 1687 SPNYSPTSPSYSPTSPNYSPTSPS-YSPTAN 1716

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SPSYSPTSP+YSPTSPSYSP+SP YSP+SP  S TSP+YSP+SP +SP 
Sbjct: 1613 YSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1672

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1673 SPNYSPTSPSYSPTSPN-YSP 1692

 Score =  112 bits (279), Expect = 3e-23
 Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SP+SP YSPTSP YSP+SPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1607 SPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTS 1666

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1667 PSYSPTSPNYSPTSPS-YSP 1685

 Score =  107 bits (266), Expect = 9e-22
 Identities = 58/96 (60%), Positives = 67/96 (69%), Gaps = 17/96 (17%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPS--------YSPTSPSYSPSSPTYSPSSPYNSG 447
            +SPSSP        YSPTSPSYSPTSP+        YSPTSP YSPSSP+YSP+SP  S 
Sbjct: 1577 YSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSP 1636

Query: 446  TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1637 TSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPS-YSP 1671

 Score =  106 bits (265), Expect = 1e-21
 Identities = 58/98 (59%), Positives = 68/98 (69%), Gaps = 19/98 (19%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSP--------SYSPSSPTYSPSSPYNSGTSPDYS 429
            FSP+SP  ++PTSP YSPTSPSYSPTSP        SYSP+SP+YSPSSP  +  SP YS
Sbjct: 1533 FSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYS 1592

Query: 428  PSSPQFSP---------STGYSPSQPGYSPSSTSQYTP 342
            P+SP +SP         S GYSP+ PGYSPSS S Y+P
Sbjct: 1593 PTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPS-YSP 1629

 Score =  100 bits (248), Expect = 1e-19
 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYS 429
            +SP+SP         YSPTSPSYSP+SP+Y+  SP+YSP+SP+YSP+SP   S TSP YS
Sbjct: 1555 YSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYS 1614

Query: 428  PSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            P+SP +SPS+  YSP+ P YSP+S S Y+P
Sbjct: 1615 PTSPGYSPSSPSYSPTSPNYSPTSPS-YSP 1643

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 48/78 (61%), Positives = 58/78 (74%), Gaps = 5/78 (6%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQF- 411
            + PSSP  YSPTSPSYSPTSP  SPTSP +SP+SP  ++P+SP+ S TSP YSP+SP   
Sbjct: 1504 YDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVG 1563

Query: 410  -SPSTGYSPSQPGYSPSS 360
             + S  YSP+ P YSPSS
Sbjct: 1564 GAQSPSYSPTSPSYSPSS 1581

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 18/97 (18%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYNSGT-SPDYS 429
            +SP+SP YSPTSP  SPTSP +SP        TSP YSP+SP+YSP+SP   G  SP YS
Sbjct: 1512 YSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYS 1571

Query: 428  PSSPQFSPST--------GYSPSQPGYSPSSTSQYTP 342
            P+SP +SPS+         YSP+ P YSP+S +  +P
Sbjct: 1572 PTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSP 1608

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 9/68 (13%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--------SPYNSGTSPDYSP 426
            +SP+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+        SP  S TSP YSP
Sbjct: 1676 YSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPGYSP 1735

Query: 425  SSPQFSPS 402
            +SP +SPS
Sbjct: 1736 TSPGYSPS 1743

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPTSPS-YSPSSPTYSPSSPYNSGTSPDYSPSSPQ-FSP-STG 396
            SP    SP     SP Y P+SP+ YSP+SP+YSP+SP  S TSP +SP+SP  F+P S  
Sbjct: 1488 SPGGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPH 1547

Query: 395  YSPSQPGYSPSS 360
            YSP+ P YSP+S
Sbjct: 1548 YSPTSPSYSPTS 1559

[103][TOP]
>UniRef100_A9V5W6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
            RepID=A9V5W6_MONBE
          Length = 1307

 Score =  116 bits (290), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1184 YSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPT 1243

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1244 SPSYSPTSPNYSPTSPS-YSP 1263

 Score =  116 bits (290), Expect = 1e-24
 Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP YSP+SP  S TSP+YSP+SP +SP 
Sbjct: 1219 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1278

Query: 404  --------STGYSPSQPGYSPSSTSQYTP 342
                    S GYSP+ PGYSP+S   Y+P
Sbjct: 1279 ANGTSGPTSPGYSPTSPGYSPTSPG-YSP 1306

 Score =  115 bits (288), Expect = 2e-24
 Identities = 58/91 (63%), Positives = 69/91 (75%), Gaps = 9/91 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP YSP+SP  S TSP+YSP+SP +SP 
Sbjct: 1191 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1250

Query: 404  -------STGYSPSQPGYSPSSTSQYTPKTN 333
                   S  YSP+ P YSP+S S Y+P  N
Sbjct: 1251 SPNYSPTSPSYSPTSPNYSPTSPS-YSPTAN 1280

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP+SPSYSPTSP+YSPTSPSYSP+SP YSP+SP  S TSP+YSP+SP +SP 
Sbjct: 1177 YSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1236

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1237 SPNYSPTSPSYSPTSPN-YSP 1256

 Score =  112 bits (279), Expect = 3e-23
 Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SP+SP YSPTSP YSP+SPSYSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1171 SPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTS 1230

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S S Y+P
Sbjct: 1231 PSYSPTSPNYSPTSPS-YSP 1249

 Score =  107 bits (266), Expect = 9e-22
 Identities = 58/96 (60%), Positives = 67/96 (69%), Gaps = 17/96 (17%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPS--------YSPTSPSYSPSSPTYSPSSPYNSG 447
            +SPSSP        YSPTSPSYSPTSP+        YSPTSP YSPSSP+YSP+SP  S 
Sbjct: 1141 YSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSP 1200

Query: 446  TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1201 TSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPS-YSP 1235

 Score =  106 bits (265), Expect = 1e-21
 Identities = 58/98 (59%), Positives = 68/98 (69%), Gaps = 19/98 (19%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSP--------SYSPSSPTYSPSSPYNSGTSPDYS 429
            FSP+SP  ++PTSP YSPTSPSYSPTSP        SYSP+SP+YSPSSP  +  SP YS
Sbjct: 1097 FSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYS 1156

Query: 428  PSSPQFSP---------STGYSPSQPGYSPSSTSQYTP 342
            P+SP +SP         S GYSP+ PGYSPSS S Y+P
Sbjct: 1157 PTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPS-YSP 1193

 Score =  100 bits (248), Expect = 1e-19
 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYS 429
            +SP+SP         YSPTSPSYSP+SP+Y+  SP+YSP+SP+YSP+SP   S TSP YS
Sbjct: 1119 YSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYS 1178

Query: 428  PSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
            P+SP +SPS+  YSP+ P YSP+S S Y+P
Sbjct: 1179 PTSPGYSPSSPSYSPTSPNYSPTSPS-YSP 1207

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 48/78 (61%), Positives = 58/78 (74%), Gaps = 5/78 (6%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQF- 411
            + PSSP  YSPTSPSYSPTSP  SPTSP +SP+SP  ++P+SP+ S TSP YSP+SP   
Sbjct: 1068 YDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVG 1127

Query: 410  -SPSTGYSPSQPGYSPSS 360
             + S  YSP+ P YSPSS
Sbjct: 1128 GAQSPSYSPTSPSYSPSS 1145

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 18/97 (18%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYNSGT-SPDYS 429
            +SP+SP YSPTSP  SPTSP +SP        TSP YSP+SP+YSP+SP   G  SP YS
Sbjct: 1076 YSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYS 1135

Query: 428  PSSPQFSPST--------GYSPSQPGYSPSSTSQYTP 342
            P+SP +SPS+         YSP+ P YSP+S +  +P
Sbjct: 1136 PTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSP 1172

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 9/68 (13%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--------SPYNSGTSPDYSP 426
            +SP+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+        SP  S TSP YSP
Sbjct: 1240 YSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPGYSP 1299

Query: 425  SSPQFSPS 402
            +SP +SPS
Sbjct: 1300 TSPGYSPS 1307

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPTSPS-YSPSSPTYSPSSPYNSGTSPDYSPSSPQ-FSP-STG 396
            SP    SP     SP Y P+SP+ YSP+SP+YSP+SP  S TSP +SP+SP  F+P S  
Sbjct: 1052 SPGGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPH 1111

Query: 395  YSPSQPGYSPSS 360
            YSP+ P YSP+S
Sbjct: 1112 YSPTSPSYSPTS 1123

[104][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
            elegans RepID=RPB1_CAEEL
          Length = 1852

 Score =  116 bits (290), Expect = 1e-24
 Identities = 59/80 (73%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            SP SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSPSSP +SPS+
Sbjct: 1606 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSS 1665

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSPS P YSP+S + Y+P
Sbjct: 1666 PSYSPSSPRYSPTSPT-YSP 1684

 Score =  114 bits (286), Expect = 4e-24
 Identities = 57/77 (74%), Positives = 65/77 (84%), Gaps = 2/77 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSP+SPSYSPSSP+YSPSSP  S TSP YSP+SP +SP 
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPT 1692

Query: 404  STGYSPSQPGYSPSSTS 354
            S  YSP+ P YSP+S S
Sbjct: 1693 SPTYSPTSPTYSPTSPS 1709

 Score =  114 bits (285), Expect = 5e-24
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP+YSPSSP  S +SP YSP+SP +SP 
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPT 1685

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1686 SPTYSPTSPTYSPTSPT-YSP 1705

 Score =  114 bits (285), Expect = 5e-24
 Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SPSSP YSP+SPSYSP+SP YSPTSP+YSP+SPTYSP+SP  S TSP YSP+SP +   
Sbjct: 1654 YSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESG 1713

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
             GYSPS P YSPSS + Y+P
Sbjct: 1714 GGYSPSSPKYSPSSPT-YSP 1732

 Score =  113 bits (283), Expect = 9e-24
 Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP    SP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +S
Sbjct: 1596 YSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1655

Query: 407  PST-GYSPSQPGYSPSSTSQYTP 342
            PS+  YSPS P YSPSS  +Y+P
Sbjct: 1656 PSSPSYSPSSPSYSPSS-PRYSP 1677

 Score =  110 bits (276), Expect = 6e-23
 Identities = 61/99 (61%), Positives = 69/99 (69%), Gaps = 18/99 (18%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSP---------SYSPTSPSYSPSSPTYSPSSPYNS 450
            +SPSSP        YSPTSPSYSPTSP         SYSPTSPSYSP+SP+YSP+SP  S
Sbjct: 1575 YSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYS 1634

Query: 449  GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
             TSP YSP+SP +SP S  YSPS P YSPSS S Y+P +
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS-YSPSS 1672

 Score =  110 bits (274), Expect = 1e-22
 Identities = 59/87 (67%), Positives = 67/87 (77%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSS 420
            +SP+SP YSPTSP+YSPTSP+YSPTSPS      YSPSSP YSPSSP  S TSP YSP+S
Sbjct: 1682 YSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTS 1741

Query: 419  PQFSP-STGYSPSQPGYSPSSTSQYTP 342
            PQ+SP S  YSPS P Y+PSS + Y P
Sbjct: 1742 PQYSPTSPQYSPSSPTYTPSSPT-YNP 1767

 Score =  109 bits (273), Expect = 1e-22
 Identities = 57/87 (65%), Positives = 69/87 (79%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD------YSPSS 420
            +SPSSP YSP+SP YSPTSP+YSPTSP+YSP+SPTYSP+SP  S TSP       YSPSS
Sbjct: 1661 YSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSS 1720

Query: 419  PQFSPST-GYSPSQPGYSPSSTSQYTP 342
            P++SPS+  YSP+ P YSP+S  QY+P
Sbjct: 1721 PKYSPSSPTYSPTSPSYSPTS-PQYSP 1746

 Score =  108 bits (271), Expect = 2e-22
 Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 8/90 (8%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------YSPSSPYNSGTSPDYSPS 423
            R+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP+      YSPSSP  S +SP YSP+
Sbjct: 1674 RYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPT 1733

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
            SP +SP S  YSP+ P YSPSS + YTP +
Sbjct: 1734 SPSYSPTSPQYSPTSPQYSPSSPT-YTPSS 1762

 Score =  108 bits (270), Expect = 3e-22
 Identities = 60/102 (58%), Positives = 72/102 (70%), Gaps = 12/102 (11%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP------SS 420
            +SPSSP YSP+SP+YSPTSPSYSPTSP YSP+SP YSPSSP  + +SP Y+P      SS
Sbjct: 1716 YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSS 1775

Query: 419  PQFSP-STGYSPSQPGYSPSSTSQYTPK----TNDNKDDPGT 309
            PQ+SP S  YSP+ P Y+PSS  QY+P     T    + PGT
Sbjct: 1776 PQYSPTSPTYSPTSPSYTPSS-PQYSPTSPTYTPSPSEQPGT 1816

 Score =  103 bits (256), Expect = 1e-20
 Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 8/89 (8%)
 Frame = -2

Query: 578  FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
            ++P+SP       YSPTSP+YSPTSPSY+P+SP YSP+SPTY+PS     GTS  YSP+S
Sbjct: 1765 YNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTS 1824

Query: 419  PQFSPST-GYSPSQPGYSPSSTSQYTPKT 336
            P +SPS+  YSP+ P YSPSS + Y P +
Sbjct: 1825 PTYSPSSPTYSPASPSYSPSSPT-YDPNS 1852

 Score =  101 bits (251), Expect = 5e-20
 Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 21/102 (20%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSY------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
            +SP+SP YSPTSPSY      SP+SP YSP+SP+YSP+SP+YSP+SP  S TSP YSPSS
Sbjct: 1696 YSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSS 1755

Query: 419  PQFSPST--------------GYSPSQPGYSPSSTSQYTPKT 336
            P ++PS+               YSP+ P YSP+S S YTP +
Sbjct: 1756 PTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPS-YTPSS 1796

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSP-TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
            ++SP+SP    SPS  P TS  YSPTSP+YSPSSPTYSP+SP  S +SP Y P+S
Sbjct: 1798 QYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPTYSPASPSYSPSSPTYDPNS 1852

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 45/98 (45%), Positives = 56/98 (57%), Gaps = 20/98 (20%)
 Frame = -2

Query: 575  SPSSPYSPT-------SP----SYSPTSP-----SYSPTSPSYSPSSP-TYSPSSPYNSG 447
            SP + +SP        SP     +SP SP     + SP +PSY   SP  YSPSSP  S 
Sbjct: 1525 SPGAGFSPAGNTDGGASPFNEGGWSPASPGDPLGALSPRTPSYGGMSPGVYSPSSPQFSM 1584

Query: 446  TSPDYSPSSPQFSPST---GYSPSQPGYSPSSTSQYTP 342
            TSP YSP+SP +SP++   G SP  P YSP+S S Y+P
Sbjct: 1585 TSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPS-YSP 1621

[105][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
            briggsae RepID=RPB1_CAEBR
          Length = 1853

 Score =  116 bits (290), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSPSSP++SP 
Sbjct: 1623 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPT 1682

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1683 SPTYSPTSPTYSPTSPT-YSP 1702

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1616 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1675

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            +  YSP+ P YSP+S + Y+P
Sbjct: 1676 SPRYSPTSPTYSPTSPT-YSP 1695

 Score =  115 bits (288), Expect = 2e-24
 Identities = 60/91 (65%), Positives = 69/91 (75%), Gaps = 12/91 (13%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP YSP+SP  S TSP YSP+SP +SP+
Sbjct: 1644 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPT 1703

Query: 401  T-----------GYSPSQPGYSPSSTSQYTP 342
            +           GYSPS P YSPSS + Y+P
Sbjct: 1704 SPTYSPTSPSYEGYSPSSPKYSPSSPT-YSP 1733

 Score =  114 bits (285), Expect = 5e-24
 Identities = 58/80 (72%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SP SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1610 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1669

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSPS P YSP+S + Y+P
Sbjct: 1670 PSYSPSSPRYSPTSPT-YSP 1688

 Score =  110 bits (274), Expect = 1e-22
 Identities = 57/87 (65%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT---YSPSSPYNSGTSPDYSPSSPQ 414
            R+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP+   YSPSSP  S +SP YSP+SP 
Sbjct: 1678 RYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPS 1737

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTPKT 336
            +SP S  YSP+ P YSPSS + YTP +
Sbjct: 1738 YSPTSPQYSPTSPQYSPSSPT-YTPSS 1763

 Score =  109 bits (273), Expect = 1e-22
 Identities = 56/84 (66%), Positives = 69/84 (82%), Gaps = 5/84 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD---YSPSSPQF 411
            +SP+SP YSP+SP YSPTSP+YSPTSP+YSP+SPTYSP+SP  S TSP    YSPSSP++
Sbjct: 1665 YSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKY 1724

Query: 410  SPST-GYSPSQPGYSPSSTSQYTP 342
            SPS+  YSP+ P YSP+S  QY+P
Sbjct: 1725 SPSSPTYSPTSPSYSPTS-PQYSP 1747

 Score =  109 bits (273), Expect = 1e-22
 Identities = 57/89 (64%), Positives = 70/89 (78%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            +SP+SP YSPTSP+YSPTSPSY   SP+SP YSPSSPTYSP+SP  S TSP YSP+SPQ+
Sbjct: 1693 YSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQY 1752

Query: 410  SPST-GYSPSQPGYSPS-----STSQYTP 342
            SPS+  Y+PS P Y+P+     S+ QY+P
Sbjct: 1753 SPSSPTYTPSSPTYNPTSPRAFSSPQYSP 1781

 Score =  109 bits (273), Expect = 1e-22
 Identities = 61/102 (59%), Positives = 72/102 (70%), Gaps = 12/102 (11%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP------SS 420
            +SPSSP YSP+SP+YSPTSPSYSPTSP YSP+SP YSPSSP  + +SP Y+P      SS
Sbjct: 1717 YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSS 1776

Query: 419  PQFSP-STGYSPSQPGYSPSSTSQYTPK----TNDNKDDPGT 309
            PQ+SP S  YSP+ P Y+PSS  QY+P     T    D PGT
Sbjct: 1777 PQYSPTSPTYSPTSPSYTPSS-PQYSPTSPTYTPSPADQPGT 1817

 Score =  107 bits (267), Expect = 7e-22
 Identities = 55/86 (63%), Positives = 68/86 (79%), Gaps = 5/86 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSY---SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            +SP+SP YSPTSP++   SP SPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +
Sbjct: 1592 YSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1651

Query: 410  SP-STGYSPSQPGYSPSSTSQYTPKT 336
            SP S  YSP+ P YSP+S S Y+P +
Sbjct: 1652 SPTSPSYSPTSPSYSPTSPS-YSPSS 1676

 Score =  105 bits (263), Expect = 2e-21
 Identities = 63/116 (54%), Positives = 70/116 (60%), Gaps = 36/116 (31%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YN--------------- 453
            ++SPSSP YSPTSPSYSPTSP YSPTSP YSPSSPTY+PSSP YN               
Sbjct: 1723 KYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSPT 1782

Query: 452  ----SGTSPDYSPSSPQFSP---------------STGYSPSQPGYSPSSTSQYTP 342
                S TSP Y+PSSPQ+SP               S  YSPS P YSPSS + Y+P
Sbjct: 1783 SPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPT-YSP 1837

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/88 (59%), Positives = 65/88 (73%), Gaps = 8/88 (9%)
 Frame = -2

Query: 578  FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
            ++P+SP       YSPTSP+YSPTSPSY+P+SP YSP+SPTY+PS     GTS  YSPSS
Sbjct: 1766 YNPTSPRAFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSS 1825

Query: 419  PQFSPST-GYSPSQPGYSPSSTSQYTPK 339
            P +SPS+  YSP+ P YSPSS + Y P+
Sbjct: 1826 PTYSPSSPTYSPASPSYSPSSPT-YDPQ 1852

 Score =  102 bits (254), Expect = 2e-20
 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 12/91 (13%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPT----------SPSYSPSSPTYSPSSPYNSGTSPDY 432
            +SP+SP +S TSP YSPTSPSYSPT          SPSYSP+SP+YSP+SP  S TSP Y
Sbjct: 1578 YSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSY 1637

Query: 431  SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP+SP +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1638 SPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1667

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 8/61 (13%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            ++PSSP YSPTSP+Y+P       TS  YSP+SP+YSPSSPTYSP+SP  S +SP Y P 
Sbjct: 1793 YTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPTYSPASPSYSPSSPTYDPQ 1852

Query: 422  S 420
            +
Sbjct: 1853 N 1853

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 21/99 (21%)
 Frame = -2

Query: 575  SPSSPYSPT-------SP----SYSPTSP-----SYSPTSPSYSPSSP-TYSPSSPYNSG 447
            SPS+ +SP        SP     +SP SP     + SP +P+Y   SP  YSP+SP  S 
Sbjct: 1528 SPSAGFSPAGNLDGGASPFNEGGWSPASPGDPLGALSPRTPAYGGMSPGVYSPASPGFSM 1587

Query: 446  TSPDYSPSSPQFSPST----GYSPSQPGYSPSSTSQYTP 342
            TSP YSP+SP +SP++    G SP  P YSP+S S Y+P
Sbjct: 1588 TSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPS-YSP 1625

[106][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
          Length = 2085

 Score =  115 bits (289), Expect = 2e-24
 Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP   YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TS  YSP+SP +S
Sbjct: 1692 YSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYS 1751

Query: 407  P-STGYSPSQPGYSPSSTS------QYTP 342
            P S GYSP+ P YSPSS S      +YTP
Sbjct: 1752 PTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1780

 Score =  111 bits (278), Expect = 4e-23
 Identities = 58/85 (68%), Positives = 69/85 (81%), Gaps = 4/85 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP YSPTSPSY  SPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+S  +S
Sbjct: 1685 YSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYS 1744

Query: 407  P-STGYSPSQPGYSPSSTSQYTPKT 336
            P S  YSP+ PGYSP+S S Y+P +
Sbjct: 1745 PTSPAYSPTSPGYSPTSPS-YSPSS 1768

 Score =  109 bits (273), Expect = 1e-22
 Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTS +YSP+SP YSP+SP  S TSP YSPSSP ++PS
Sbjct: 1715 YSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPS 1774

Query: 401  T-------GYSPSQPGYSPSSTSQYTP 342
            +        YSPS P Y  S++  Y+P
Sbjct: 1775 SVKYTPSHAYSPSSPNYYSSTSPTYSP 1801

 Score =  106 bits (265), Expect = 1e-21
 Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 5/83 (6%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYS--PTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFS 408
            SPS  YSPTSPSYSPTSPSYS  PTSPSYSP+SP+Y  SP+SP  S TSP YSP+SP +S
Sbjct: 1664 SPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYS 1723

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S S Y+P
Sbjct: 1724 PTSPSYSPTSPSYSPTS-SAYSP 1745

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP--DYSPSSPQ 414
            +SP+SP YSPTSP Y+PTS +YSPTSPSY+P+SP  +YSP+SP  S TSP   YSP+SP 
Sbjct: 1632 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPS 1691

Query: 413  F---SPSTGYSPSQPGYSPSSTSQYTP 342
            +   SPS  YSP+ P YSP+S S Y+P
Sbjct: 1692 YSPTSPSYNYSPTSPSYSPTSPS-YSP 1717

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 22/104 (21%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSP----------------- 459
            +SP+SP Y+PTS +YSPTSPSY+PTSP  SYSP+SP+YSP+SP                 
Sbjct: 1639 YSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPS 1698

Query: 458  YN-SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTN 333
            YN S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P ++
Sbjct: 1699 YNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1741

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 53/88 (60%), Positives = 63/88 (71%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGT-----SPDYSPSS 420
            +SP+SP YSPTS +YSPTSP+YSPTSP YSP+SP+YSPSSP YN  +     S  YSPSS
Sbjct: 1729 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSS 1788

Query: 419  PQFSPSTG--YSPSQPGYSPSSTSQYTP 342
            P +  ST   YSP+ P YS  S S Y+P
Sbjct: 1789 PNYYSSTSPTYSPTSPSYSQPSPS-YSP 1815

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 14/93 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411
            +S +SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S   S TSP Y+P+SP +   
Sbjct: 1611 YSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYS 1670

Query: 410  ---------SPSTGYSPSQPGYSPSSTS-QYTP 342
                     SPS  YSP+ P YSP+S S  Y+P
Sbjct: 1671 PTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1703

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 50/85 (58%), Positives = 59/85 (69%), Gaps = 8/85 (9%)
 Frame = -2

Query: 572  PSSPYSP----TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-- 411
            P SP SP    TSP YSP+SP YSPTS SYSP+SP YSP+SP  + TS  YSP+SP +  
Sbjct: 1603 PHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNP 1662

Query: 410  -SPSTGYSPSQPGYSPSSTS-QYTP 342
             SPS  YSP+ P YSP+S S  Y+P
Sbjct: 1663 TSPSYSYSPTSPSYSPTSPSYSYSP 1687

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 9/75 (12%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPS------SPTYSPSSP-YNSGTSPDYSPS 423
            +SP+SP YSPTSP YSPTSPSYSP+SPSY+PS      S  YSPSSP Y S TSP YSP+
Sbjct: 1743 YSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPT 1802

Query: 422  SPQFS-PSTGYSPSQ 381
            SP +S PS  YSP++
Sbjct: 1803 SPSYSQPSPSYSPTR 1817

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
            +SP+SP         Y PTS  +SPTSP YS TSP YSPSSP YSP+S   S TSP YSP
Sbjct: 1582 YSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSP 1641

Query: 425  SSPQFSP-STGYSPSQPGYSPSSTS-QYTP 342
            +SP ++P S+ YSP+ P Y+P+S S  Y+P
Sbjct: 1642 TSPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1671

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSP-TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            F+ SSPY+P SP YSP SP   P TSPSY P+S  +SP+SP  S TSP YSPSSP +SP 
Sbjct: 1569 FTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPT 1628

Query: 404  -------STGYSPSQPGYSPSSTSQYTP 342
                   S  YSP+ P Y+P+S S Y+P
Sbjct: 1629 SLSYSPTSPVYSPTSPVYNPTS-SAYSP 1655

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 2/63 (3%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQFSP 405
            +SP+SP YSP+SPSY+P+S  Y+P S +YSPSSP  YS +SP  S TSP YS  SP +SP
Sbjct: 1757 YSPTSPSYSPSSPSYNPSSVKYTP-SHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSP 1815

Query: 404  STG 396
            + G
Sbjct: 1816 TRG 1818

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 26/40 (65%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPS-YSPTSPSYSPTSPSYSPSSPTYSPS 465
            +++PS  YSP+SP+ YS TSP+YSPTSPSYS  SP+YSP+
Sbjct: 1777 KYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSPT 1816

[107][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
            RepID=Q5WMZ9_ORYSJ
          Length = 1741

 Score =  115 bits (289), Expect = 2e-24
 Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP   YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TS  YSP+SP +S
Sbjct: 1639 YSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYS 1698

Query: 407  P-STGYSPSQPGYSPSSTS------QYTP 342
            P S GYSP+ P YSPSS S      +YTP
Sbjct: 1699 PTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1727

 Score =  111 bits (278), Expect = 4e-23
 Identities = 58/85 (68%), Positives = 69/85 (81%), Gaps = 4/85 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP YSPTSPSY  SPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+S  +S
Sbjct: 1632 YSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYS 1691

Query: 407  P-STGYSPSQPGYSPSSTSQYTPKT 336
            P S  YSP+ PGYSP+S S Y+P +
Sbjct: 1692 PTSPAYSPTSPGYSPTSPS-YSPSS 1715

 Score =  106 bits (265), Expect = 1e-21
 Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 5/83 (6%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYS--PTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFS 408
            SPS  YSPTSPSYSPTSPSYS  PTSPSYSP+SP+Y  SP+SP  S TSP YSP+SP +S
Sbjct: 1611 SPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYS 1670

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S S Y+P
Sbjct: 1671 PTSPSYSPTSPSYSPTS-SAYSP 1692

 Score =  106 bits (264), Expect = 1e-21
 Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTS +YSP+SP YSP+SP  S TSP YSPSSP ++PS
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPS 1721

Query: 401  T-GYSPSQPGYSPSSTSQY 348
            +  Y+PS   YSPSS + Y
Sbjct: 1722 SVKYTPSH-AYSPSSPNYY 1739

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP--DYSPSSPQ 414
            +SP+SP YSPTSP Y+PTS +YSPTSPSY+P+SP  +YSP+SP  S TSP   YSP+SP 
Sbjct: 1579 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPS 1638

Query: 413  F---SPSTGYSPSQPGYSPSSTSQYTP 342
            +   SPS  YSP+ P YSP+S S Y+P
Sbjct: 1639 YSPTSPSYNYSPTSPSYSPTSPS-YSP 1664

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 22/104 (21%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSP----------------- 459
            +SP+SP Y+PTS +YSPTSPSY+PTSP  SYSP+SP+YSP+SP                 
Sbjct: 1586 YSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPS 1645

Query: 458  YN-SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTN 333
            YN S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P ++
Sbjct: 1646 YNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1688

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 14/93 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411
            +S +SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S   S TSP Y+P+SP +   
Sbjct: 1558 YSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYS 1617

Query: 410  ---------SPSTGYSPSQPGYSPSSTS-QYTP 342
                     SPS  YSP+ P YSP+S S  Y+P
Sbjct: 1618 PTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1650

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 50/85 (58%), Positives = 59/85 (69%), Gaps = 8/85 (9%)
 Frame = -2

Query: 572  PSSPYSP----TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-- 411
            P SP SP    TSP YSP+SP YSPTS SYSP+SP YSP+SP  + TS  YSP+SP +  
Sbjct: 1550 PHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNP 1609

Query: 410  -SPSTGYSPSQPGYSPSSTS-QYTP 342
             SPS  YSP+ P YSP+S S  Y+P
Sbjct: 1610 TSPSYSYSPTSPSYSPTSPSYSYSP 1634

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
            +SP+SP         Y PTS  +SPTSP YS TSP YSPSSP YSP+S   S TSP YSP
Sbjct: 1529 YSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSP 1588

Query: 425  SSPQFSP-STGYSPSQPGYSPSSTS-QYTP 342
            +SP ++P S+ YSP+ P Y+P+S S  Y+P
Sbjct: 1589 TSPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1618

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSP-TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            F+ SSPY+P SP YSP SP   P TSPSY P+S  +SP+SP  S TSP YSPSSP +SP 
Sbjct: 1516 FTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPT 1575

Query: 404  -------STGYSPSQPGYSPSSTSQYTP 342
                   S  YSP+ P Y+P+S S Y+P
Sbjct: 1576 SLSYSPTSPVYSPTSPVYNPTS-SAYSP 1602

[108][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
            RepID=Q0DKN9_ORYSJ
          Length = 1834

 Score =  115 bits (289), Expect = 2e-24
 Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP   YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TS  YSP+SP +S
Sbjct: 1692 YSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYS 1751

Query: 407  P-STGYSPSQPGYSPSSTS------QYTP 342
            P S GYSP+ P YSPSS S      +YTP
Sbjct: 1752 PTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1780

 Score =  111 bits (278), Expect = 4e-23
 Identities = 58/85 (68%), Positives = 69/85 (81%), Gaps = 4/85 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP YSPTSPSY  SPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+S  +S
Sbjct: 1685 YSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYS 1744

Query: 407  P-STGYSPSQPGYSPSSTSQYTPKT 336
            P S  YSP+ PGYSP+S S Y+P +
Sbjct: 1745 PTSPAYSPTSPGYSPTSPS-YSPSS 1768

 Score =  109 bits (273), Expect = 1e-22
 Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSPSYSPTS +YSP+SP YSP+SP  S TSP YSPSSP ++PS
Sbjct: 1715 YSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPS 1774

Query: 401  T-------GYSPSQPGYSPSSTSQYTP 342
            +        YSPS P Y  S++  Y+P
Sbjct: 1775 SVKYTPSHAYSPSSPNYYSSTSPTYSP 1801

 Score =  106 bits (265), Expect = 1e-21
 Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 5/83 (6%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYS--PTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFS 408
            SPS  YSPTSPSYSPTSPSYS  PTSPSYSP+SP+Y  SP+SP  S TSP YSP+SP +S
Sbjct: 1664 SPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYS 1723

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S S Y+P
Sbjct: 1724 PTSPSYSPTSPSYSPTS-SAYSP 1745

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP--DYSPSSPQ 414
            +SP+SP YSPTSP Y+PTS +YSPTSPSY+P+SP  +YSP+SP  S TSP   YSP+SP 
Sbjct: 1632 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPS 1691

Query: 413  F---SPSTGYSPSQPGYSPSSTSQYTP 342
            +   SPS  YSP+ P YSP+S S Y+P
Sbjct: 1692 YSPTSPSYNYSPTSPSYSPTSPS-YSP 1717

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 22/104 (21%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSP----------------- 459
            +SP+SP Y+PTS +YSPTSPSY+PTSP  SYSP+SP+YSP+SP                 
Sbjct: 1639 YSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPS 1698

Query: 458  YN-SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTN 333
            YN S TSP YSP+SP +SP S  YSP+ P YSP+S S Y+P ++
Sbjct: 1699 YNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1741

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 14/93 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411
            +S +SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S   S TSP Y+P+SP +   
Sbjct: 1611 YSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYS 1670

Query: 410  ---------SPSTGYSPSQPGYSPSSTS-QYTP 342
                     SPS  YSP+ P YSP+S S  Y+P
Sbjct: 1671 PTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1703

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 50/85 (58%), Positives = 59/85 (69%), Gaps = 8/85 (9%)
 Frame = -2

Query: 572  PSSPYSP----TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-- 411
            P SP SP    TSP YSP+SP YSPTS SYSP+SP YSP+SP  + TS  YSP+SP +  
Sbjct: 1603 PHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNP 1662

Query: 410  -SPSTGYSPSQPGYSPSSTS-QYTP 342
             SPS  YSP+ P YSP+S S  Y+P
Sbjct: 1663 TSPSYSYSPTSPSYSPTSPSYSYSP 1687

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSPSYSP+SPSY+PSS  Y+PS  Y+  +   YS +SP +SP 
Sbjct: 1743 YSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPT 1802

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YS   P YSP+S  +        +++P
Sbjct: 1803 SPSYSQPSPSYSPTSRVEEEAHEEAEEEEP 1832

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
            +SP+SP         Y PTS  +SPTSP YS TSP YSPSSP YSP+S   S TSP YSP
Sbjct: 1582 YSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSP 1641

Query: 425  SSPQFSP-STGYSPSQPGYSPSSTS-QYTP 342
            +SP ++P S+ YSP+ P Y+P+S S  Y+P
Sbjct: 1642 TSPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1671

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSP-TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            F+ SSPY+P SP YSP SP   P TSPSY P+S  +SP+SP  S TSP YSPSSP +SP 
Sbjct: 1569 FTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPT 1628

Query: 404  -------STGYSPSQPGYSPSSTSQYTP 342
                   S  YSP+ P Y+P+S S Y+P
Sbjct: 1629 SLSYSPTSPVYSPTSPVYNPTS-SAYSP 1655

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/41 (65%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPS-YSPTSPSYSPTSPSYSPSSPTYSPSS 462
            +++PS  YSP+SP+ YS TSP+YSPTSPSYS  SP+YSP+S
Sbjct: 1777 KYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSPTS 1817

[109][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
            patens RepID=A9U396_PHYPA
          Length = 1742

 Score =  115 bits (289), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSY+PTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1592 YSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y P
Sbjct: 1652 SPSYSPTSPAYSPTSPS-YAP 1671

 Score =  115 bits (288), Expect = 2e-24
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPT 1693

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSPS P YSP+S S Y+P
Sbjct: 1694 SPSYSPSSPSYSPTSPS-YSP 1713

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1578 YSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPT 1637

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1638 SPSYSPTSPSYSPTSPS-YSP 1657

 Score =  114 bits (285), Expect = 5e-24
 Identities = 55/91 (60%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSPSY+PTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1599 YSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            S  YSP+ P Y+P+S +      + +   PG
Sbjct: 1659 SPAYSPTSPSYAPTSPAYSPTSPSYSPTSPG 1689

 Score =  114 bits (284), Expect = 7e-24
 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSP+YSPTSPSY+P+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPS 1700

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            +  YSP+ P YSP+S + Y+P
Sbjct: 1701 SPSYSPTSPSYSPTSPA-YSP 1720

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSPSYSPTSPSY+P+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1585 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1645 SPSYSPTSPSYSPTSPA-YSP 1664

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/77 (71%), Positives = 64/77 (83%), Gaps = 2/77 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP Y+PTSP+YSPTSPSYSPTSP YSP+SP+YSPSSP  S TSP YSP+SP +SP 
Sbjct: 1662 YSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPT 1721

Query: 404  STGYSPSQPGYSPSSTS 354
            S  YSPS P YSP+S S
Sbjct: 1722 SPRYSPSSPSYSPTSPS 1738

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP  + TSP YSP+SP +SP 
Sbjct: 1571 YSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPT 1630

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650

 Score =  112 bits (279), Expect = 3e-23
 Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP  S TSP Y+P+SP +SP 
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPT 1623

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1624 SPSYSPTSPSYSPTSPS-YSP 1643

 Score =  111 bits (277), Expect = 5e-23
 Identities = 56/81 (69%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSPSSP YSP+SP YSP SP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1536 FSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPT 1595

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S GYSP+ P YSP+S S Y P
Sbjct: 1596 SPGYSPTSPSYSPTSPS-YAP 1615

 Score =  108 bits (271), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1550 YSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPT 1609

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1610 SPSYAPTSPSYSPTSPS-YSP 1629

 Score =  108 bits (269), Expect = 4e-22
 Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSP SP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1543 YSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPT 1602

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P Y+P+S S Y+P
Sbjct: 1603 SPSYSPTSPSYAPTSPS-YSP 1622

 Score =  107 bits (268), Expect = 5e-22
 Identities = 51/71 (71%), Positives = 61/71 (85%), Gaps = 2/71 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            ++P+SP YSPTSPSYSPTSP YSPTSPSYSPSSP+YSP+SP  S TSP YSP+SP++SPS
Sbjct: 1669 YAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPS 1728

Query: 401  T-GYSPSQPGY 372
            +  YSP+ P Y
Sbjct: 1729 SPSYSPTSPSY 1739

 Score =  104 bits (259), Expect = 6e-21
 Identities = 52/84 (61%), Positives = 64/84 (76%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSP---SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            +FSP   + P+SP+SP YSP+SP YSP SP YSP+SP YSP+SP  S TSP YSP+SP +
Sbjct: 1526 QFSPYVGNMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGY 1585

Query: 410  SP-STGYSPSQPGYSPSSTSQYTP 342
            SP S  YSP+ PGYSP+S S Y+P
Sbjct: 1586 SPTSPSYSPTSPGYSPTSPS-YSP 1608

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 47/66 (71%), Positives = 53/66 (80%), Gaps = 4/66 (6%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP---QF 411
            +SP+SP YSPTSP YSPTSPSYSP+SPSYSP+SP+YSP+SP  S TSP YSPSSP     
Sbjct: 1676 YSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPT 1735

Query: 410  SPSTGY 393
            SPS  Y
Sbjct: 1736 SPSYRY 1741

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
 Frame = -2

Query: 575  SPSSPYSPTSPS-YSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            SPS   SP S + +SP   +  +SP+SP YSPSSP YSP SP  S TSP YSP+SP +SP
Sbjct: 1514 SPSLRASPLSDAQFSPYVGNMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSP 1573

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S GYSP+ PGYSP+S S Y+P
Sbjct: 1574 TSPGYSPTSPGYSPTSPS-YSP 1594

[110][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
            RepID=Q9AXN0_9RHOD
          Length = 1746

 Score =  115 bits (288), Expect = 2e-24
 Identities = 59/93 (63%), Positives = 70/93 (75%), Gaps = 12/93 (12%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSPTSP+YSPTSP+YSP+SPTYSP+SP  S TSP YSP+SP +SPS
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPS 1665

Query: 401  T-----------GYSPSQPGYSPSSTSQYTPKT 336
            +            YSPS P YSPSS  QY+P +
Sbjct: 1666 SPAMSPARAGGVSYSPSSPHYSPSS-PQYSPSS 1697

 Score =  109 bits (273), Expect = 1e-22
 Identities = 59/93 (63%), Positives = 70/93 (75%), Gaps = 12/93 (12%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP----------YNSGTSPDY 432
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSPSSP            S +SP Y
Sbjct: 1627 YSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHY 1686

Query: 431  SPSSPQFSPST-GYSPSQPGYSPSSTSQYTPKT 336
            SPSSPQ+SPS+  YSPS P YSPSS  QY+P +
Sbjct: 1687 SPSSPQYSPSSPHYSPSSPHYSPSS-PQYSPSS 1718

 Score =  109 bits (272), Expect = 2e-22
 Identities = 56/81 (69%), Positives = 62/81 (76%), Gaps = 9/81 (11%)
 Frame = -2

Query: 575  SPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
            SPSSP        YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+S
Sbjct: 1586 SPSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTS 1645

Query: 419  PQFSP-STGYSPSQPGYSPSS 360
            P +SP S  YSP+ P YSPSS
Sbjct: 1646 PTYSPTSPTYSPTSPMYSPSS 1666

 Score =  106 bits (264), Expect = 1e-21
 Identities = 58/93 (62%), Positives = 68/93 (73%), Gaps = 12/93 (12%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSP----------SYSPSSPTYSPSSPYNSGTSPDY 432
            +SP+SP YSPTSP+YSPTSP YSP+SP          SYSPSSP YSPSSP  S +SP Y
Sbjct: 1641 YSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHY 1700

Query: 431  SPSSPQFSPST-GYSPSQPGYSPSSTSQYTPKT 336
            SPSSP +SPS+  YSPS P YSPSS + Y+P +
Sbjct: 1701 SPSSPHYSPSSPQYSPSSPQYSPSSPA-YSPSS 1732

 Score =  106 bits (264), Expect = 1e-21
 Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 12/85 (14%)
 Frame = -2

Query: 578  FSPSSP-YSPTSP----------SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
            +SP+SP YSP+SP          SYSP+SP YSP+SP YSPSSP YSPSSP+ S +SP Y
Sbjct: 1655 YSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQY 1714

Query: 431  SPSSPQFSPST-GYSPSQPGYSPSS 360
            SPSSPQ+SPS+  YSPS P YSPSS
Sbjct: 1715 SPSSPQYSPSSPAYSPSSPAYSPSS 1739

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SPSSP YSP+SP YSP+SP YSP+SP YSPSSP YSPSSP  S +SP YSPSSP +SPS
Sbjct: 1679 YSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPS 1738

Query: 401  TGYSPS 384
            +   PS
Sbjct: 1739 SPAHPS 1744

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390
            SP SP+SP     SP YSPTSP+YSP+SP+YSP+SP  S TSP YSP+SP +SP S  YS
Sbjct: 1583 SPRSPSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYS 1642

Query: 389  PSQPGYSPSSTSQYTP 342
            P+ P YSP+S + Y+P
Sbjct: 1643 PTSPTYSPTSPT-YSP 1657

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT 444
            +SPSSP YSP+SP YSP+SP YSP+SP+YSPSSP YSPSSP +  T
Sbjct: 1700 YSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPSSPAHPST 1745

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
 Frame = -2

Query: 569  SSPYSPTSPSY----SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPYS    ++    SP+SP     SP YSP+SPTYSP       TSP YSP+SP +SP 
Sbjct: 1571 ASPYSRAGNAFYSPRSPSSPGGVAASPGYSPTSPTYSP-------TSPSYSPTSPSYSPT 1623

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1624 SPAYSPTSPAYSPTSPT-YSP 1643

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 25/105 (23%)
 Frame = -2

Query: 581  RFSP--SSPYSPTSPSYSPTSPSY--------SPTSPSYSPSSPT----YSPSSPYNSG- 447
            +FSP  +SPY   + S +PTSP+Y        SP +   SP S      YSP SP + G 
Sbjct: 1533 QFSPFAASPYGDAAFSPTPTSPAYASPYGTAASPFNAMASPYSRAGNAFYSPRSPSSPGG 1592

Query: 446  ---------TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
                     TSP YSP+SP +SP S  YSP+ P YSP+S + Y+P
Sbjct: 1593 VAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPA-YSP 1636

[111][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
            RepID=A4S3M0_OSTLU
          Length = 1646

 Score =  115 bits (287), Expect = 3e-24
 Identities = 55/89 (61%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1558 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1617

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            S  YSP+ P YSP+S + Y+PK  +  ++
Sbjct: 1618 SPAYSPTSPAYSPTSPA-YSPKEEEENEE 1645

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1523 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1582

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1583 SPAYSPTSPAYSPTSPA-YSP 1602

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1544 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1603

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1604 SPAYSPTSPAYSPTSPA-YSP 1623

[112][TOP]
>UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
            RepID=A8Q5I6_MALGO
          Length = 1607

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/85 (67%), Positives = 67/85 (78%), Gaps = 2/85 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP
Sbjct: 1499 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1558

Query: 404  -STGYSPSQPGYSPSSTSQYTPKTN 333
             S  YSP+ P YSP+S  QY+P  N
Sbjct: 1559 TSPQYSPTSPQYSPTS-PQYSPSGN 1582

 Score =  114 bits (284), Expect = 7e-24
 Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP
Sbjct: 1478 KYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1537

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S  QY+P
Sbjct: 1538 TSPQYSPTSPQYSPTS-PQYSP 1558

 Score =  104 bits (259), Expect = 6e-21
 Identities = 56/94 (59%), Positives = 66/94 (70%), Gaps = 15/94 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPS-------------YSPTSPSYSPSSPTYSPSSPYNSGTS 441
            +SP+SP YSPTSP YSPTSP+             YSPTSP YSP+SP YSP+SP  S TS
Sbjct: 1445 YSPTSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTS 1504

Query: 440  PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P YSP+SPQ+SP S  YSP+ P YSP+S  QY+P
Sbjct: 1505 PQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1537

 Score =  104 bits (259), Expect = 6e-21
 Identities = 56/94 (59%), Positives = 66/94 (70%), Gaps = 15/94 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
            +SP+SP YSPTSP+             YSPTSP YSPTSP YSP+SP YSP+SP  S TS
Sbjct: 1452 YSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1511

Query: 440  PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P YSP+SPQ+SP S  YSP+ P YSP+S  QY+P
Sbjct: 1512 PQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1544

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP
Sbjct: 1520 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1579

Query: 404  S--TGYSPSQPGYSP 366
            S   G S +    SP
Sbjct: 1580 SGNVGASAASGAASP 1594

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 55/107 (51%), Positives = 65/107 (60%), Gaps = 28/107 (26%)
 Frame = -2

Query: 578  FSPSSPY--------------SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN---- 453
            +SPSSP               SP SP+YSPTSP YSPTSP+YSP+SP YSP+SP      
Sbjct: 1411 YSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYSPTSPAGPRGR 1470

Query: 452  ---------SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
                     S TSP YSP+SPQ+SP S  YSP+ P YSP+S  QY+P
Sbjct: 1471 RLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1516

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 53/116 (45%), Positives = 65/116 (56%), Gaps = 37/116 (31%)
 Frame = -2

Query: 578  FSPSSP----------YSPTSPSYSPTSP-------------SYSPTSPSYSPSSPTYSP 468
            +SP+SP          YSPTSPSYSP+SP               SP SP+YSP+SP YSP
Sbjct: 1388 YSPTSPRIFAGATSPSYSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSP 1447

Query: 467  SSPYNSGTSPDYSPSS-------------PQFSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP  S TSP YSP+S             P++SP S  YSP+ P YSP+S  QY+P
Sbjct: 1448 TSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTS-PQYSP 1502

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 46/119 (38%), Positives = 57/119 (47%), Gaps = 47/119 (39%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYS---------------------------------PTSPSY 495
            SP   ++PTSP Y PTSP+Y+                                  TSPSY
Sbjct: 1345 SPGYGFAPTSPGYVPTSPAYNATSPALGAMSPWVGAAGATSPAYSPTSPRIFAGATSPSY 1404

Query: 494  SPSSPTYSPSSPY-------------NSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
            SP+SP+YSPSSP               S  SP+YSP+SP +SP S  YSP+ P YSP+S
Sbjct: 1405 SPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYSPTS 1463

[113][TOP]
>UniRef100_Q5CUJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cryptosporidium parvum
            Iowa II RepID=Q5CUJ2_CRYPV
          Length = 1902

 Score =  114 bits (286), Expect = 4e-24
 Identities = 55/94 (58%), Positives = 72/94 (76%), Gaps = 5/94 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP YSPTSP YSPTSP YSPSSP YSP+SP  S TSP+Y+P+SP +SP+
Sbjct: 1766 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPT 1825

Query: 401  TGYSPSQPGYSPSSTSQYTPKT----NDNKDDPG 312
            + YSP+ P Y+P+S + Y+P +    ++N   PG
Sbjct: 1826 SHYSPTSPNYNPTSPN-YSPSSPNYISNNSGSPG 1858

 Score =  112 bits (279), Expect = 3e-23
 Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP 
Sbjct: 1731 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1790

Query: 404  STGYSPSQPGYSPSSTSQYTPKT-NDNKDDP 315
            S  YSPS P YSP+S  QY+P + N N   P
Sbjct: 1791 SPHYSPSSPHYSPTS-PQYSPTSPNYNPASP 1820

 Score =  108 bits (271), Expect = 2e-22
 Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP 
Sbjct: 1717 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1776

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSP+S   Y+P +
Sbjct: 1777 SPHYSPTSPHYSPTS-PHYSPSS 1798

 Score =  108 bits (270), Expect = 3e-22
 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP 
Sbjct: 1689 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1748

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S   Y+P
Sbjct: 1749 SPHYSPTSPHYSPTS-PHYSP 1768

 Score =  108 bits (270), Expect = 3e-22
 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP 
Sbjct: 1696 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1755

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S   Y+P
Sbjct: 1756 SPHYSPTSPHYSPTS-PHYSP 1775

 Score =  108 bits (270), Expect = 3e-22
 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP 
Sbjct: 1703 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1762

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S   Y+P
Sbjct: 1763 SPHYSPTSPHYSPTS-PHYSP 1782

 Score =  108 bits (270), Expect = 3e-22
 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP 
Sbjct: 1710 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1769

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S   Y+P
Sbjct: 1770 SPHYSPTSPHYSPTS-PHYSP 1789

 Score =  107 bits (267), Expect = 7e-22
 Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S
Sbjct: 1683 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1742

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S   Y+P
Sbjct: 1743 PHYSPTSPHYSPTS-PHYSP 1761

 Score =  102 bits (253), Expect = 3e-20
 Identities = 54/93 (58%), Positives = 63/93 (67%), Gaps = 14/93 (15%)
 Frame = -2

Query: 578  FSPSSPY-------------SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438
            +SPSSP              SPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP
Sbjct: 1663 YSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1722

Query: 437  DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
             YSP+SP +SP S  YSP+ P YSP+S   Y+P
Sbjct: 1723 HYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1754

 Score =  100 bits (249), Expect = 8e-20
 Identities = 57/98 (58%), Positives = 69/98 (70%), Gaps = 10/98 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTSP YSPTSP YSPTSP YS       P+SP YSP+SP+ S +SP YSP+
Sbjct: 1745 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPT 1804

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTPKT-NDNKDDP 315
            SPQ+SP S  Y+P+ P YSP  TS Y+P + N N   P
Sbjct: 1805 SPQYSPTSPNYNPASPNYSP--TSHYSPTSPNYNPTSP 1840

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP------YNSGTSPDYSPSS 420
            +SP+SP YSPTSP YSP+SP YSPTSP YSP+SP Y+P+SP      + S TSP+Y+P+S
Sbjct: 1780 YSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTS 1839

Query: 419  PQFSPST----GYSPSQPGYSPSSTSQYTP 342
            P +SPS+      +   PGYSPSS  QY P
Sbjct: 1840 PNYSPSSPNYISNNSGSPGYSPSS-PQYDP 1868

 Score = 87.8 bits (216), Expect = 6e-16
 Identities = 50/101 (49%), Positives = 62/101 (61%), Gaps = 20/101 (19%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY-------------SPTSPSYSPSSPTYSPSSP---YNS 450
            +SPSSP YSPTSP YSPTSP+Y             SPTSP+Y+P+SP YSPSSP    N+
Sbjct: 1794 YSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPNYSPSSPNYISNN 1853

Query: 449  GTSPDYSPSSPQFSP-STGYSPSQPGYSPSS--TSQYTPKT 336
              SP YSPSSPQ+ P +    P  P YS      ++Y+P +
Sbjct: 1854 SGSPGYSPSSPQYDPIAVASVPRSPSYSVGKMVDAEYSPSS 1894

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 51/119 (42%), Positives = 60/119 (50%), Gaps = 39/119 (32%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPS-------YSPTSPS-----YSPTSPSYSPSSPT------------- 477
            + +P SP SP SP        YSP SPS     Y+PTSP Y+ SSPT             
Sbjct: 1595 QMTPRSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKY 1654

Query: 476  --------YSPSSPYN-----SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
                    YSPSSP N     S  SPD SP+SP +SP S  YSP+ P YSP+S   Y+P
Sbjct: 1655 KVNNTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1712

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 20/74 (27%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSP---------------YN 453
            +SP+S YSPTSP+Y+PTSP+YSP+SP+Y   +  SP YSPSSP               Y+
Sbjct: 1822 YSPTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVASVPRSPSYS 1881

Query: 452  SGTSPD--YSPSSP 417
             G   D  YSPSSP
Sbjct: 1882 VGKMVDAEYSPSSP 1895

[114][TOP]
>UniRef100_Q5CH45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
            RepID=Q5CH45_CRYHO
          Length = 1895

 Score =  114 bits (286), Expect = 4e-24
 Identities = 55/94 (58%), Positives = 72/94 (76%), Gaps = 5/94 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP YSPTSP YSPTSP YSPSSP YSP+SP  S TSP+Y+P+SP +SP+
Sbjct: 1759 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPT 1818

Query: 401  TGYSPSQPGYSPSSTSQYTPKT----NDNKDDPG 312
            + YSP+ P Y+P+S + Y+P +    ++N   PG
Sbjct: 1819 SHYSPTSPNYNPTSPN-YSPSSPNYISNNSGSPG 1851

 Score =  112 bits (279), Expect = 3e-23
 Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP 
Sbjct: 1724 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1783

Query: 404  STGYSPSQPGYSPSSTSQYTPKT-NDNKDDP 315
            S  YSPS P YSP+S  QY+P + N N   P
Sbjct: 1784 SPHYSPSSPHYSPTS-PQYSPTSPNYNPASP 1813

 Score =  108 bits (271), Expect = 2e-22
 Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP 
Sbjct: 1710 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1769

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSP+S   Y+P +
Sbjct: 1770 SPHYSPTSPHYSPTS-PHYSPSS 1791

 Score =  108 bits (270), Expect = 3e-22
 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP 
Sbjct: 1682 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1741

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S   Y+P
Sbjct: 1742 SPHYSPTSPHYSPTS-PHYSP 1761

 Score =  108 bits (270), Expect = 3e-22
 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP 
Sbjct: 1689 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1748

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S   Y+P
Sbjct: 1749 SPHYSPTSPHYSPTS-PHYSP 1768

 Score =  108 bits (270), Expect = 3e-22
 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP 
Sbjct: 1696 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1755

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S   Y+P
Sbjct: 1756 SPHYSPTSPHYSPTS-PHYSP 1775

 Score =  108 bits (270), Expect = 3e-22
 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP 
Sbjct: 1703 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1762

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S   Y+P
Sbjct: 1763 SPHYSPTSPHYSPTS-PHYSP 1782

 Score =  107 bits (267), Expect = 7e-22
 Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S
Sbjct: 1676 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1735

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S   Y+P
Sbjct: 1736 PHYSPTSPHYSPTS-PHYSP 1754

 Score =  102 bits (253), Expect = 3e-20
 Identities = 54/93 (58%), Positives = 63/93 (67%), Gaps = 14/93 (15%)
 Frame = -2

Query: 578  FSPSSPY-------------SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438
            +SPSSP              SPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP
Sbjct: 1656 YSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1715

Query: 437  DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
             YSP+SP +SP S  YSP+ P YSP+S   Y+P
Sbjct: 1716 HYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1747

 Score =  100 bits (249), Expect = 8e-20
 Identities = 57/98 (58%), Positives = 69/98 (70%), Gaps = 10/98 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP YSPTSP YSPTSP YSPTSP YS       P+SP YSP+SP+ S +SP YSP+
Sbjct: 1738 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPT 1797

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTPKT-NDNKDDP 315
            SPQ+SP S  Y+P+ P YSP  TS Y+P + N N   P
Sbjct: 1798 SPQYSPTSPNYNPASPNYSP--TSHYSPTSPNYNPTSP 1833

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP------YNSGTSPDYSPSS 420
            +SP+SP YSPTSP YSP+SP YSPTSP YSP+SP Y+P+SP      + S TSP+Y+P+S
Sbjct: 1773 YSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTS 1832

Query: 419  PQFSPST----GYSPSQPGYSPSSTSQYTP 342
            P +SPS+      +   PGYSPSS  QY P
Sbjct: 1833 PNYSPSSPNYISNNSGSPGYSPSS-PQYDP 1861

 Score = 87.8 bits (216), Expect = 6e-16
 Identities = 51/101 (50%), Positives = 62/101 (61%), Gaps = 20/101 (19%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY-------------SPTSPSYSPSSPTYSPSSP---YNS 450
            +SPSSP YSPTSP YSPTSP+Y             SPTSP+Y+P+SP YSPSSP    N+
Sbjct: 1787 YSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPNYSPSSPNYISNN 1846

Query: 449  GTSPDYSPSSPQFSPSTGYS-PSQPGYSPSS--TSQYTPKT 336
              SP YSPSSPQ+ P    S P  P YS      ++Y+P +
Sbjct: 1847 SGSPGYSPSSPQYDPIAVTSVPRSPSYSVGKMVDAEYSPSS 1887

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 51/119 (42%), Positives = 60/119 (50%), Gaps = 39/119 (32%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPS-------YSPTSPS-----YSPTSPSYSPSSPT------------- 477
            + +P SP SP SP        YSP SPS     Y+PTSP Y+ SSPT             
Sbjct: 1588 QMTPRSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKY 1647

Query: 476  --------YSPSSPYN-----SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
                    YSPSSP N     S  SPD SP+SP +SP S  YSP+ P YSP+S   Y+P
Sbjct: 1648 KVNNTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1705

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 20/74 (27%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSP---------------YN 453
            +SP+S YSPTSP+Y+PTSP+YSP+SP+Y   +  SP YSPSSP               Y+
Sbjct: 1815 YSPTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVTSVPRSPSYS 1874

Query: 452  SGTSPD--YSPSSP 417
             G   D  YSPSSP
Sbjct: 1875 VGKMVDAEYSPSSP 1888

[115][TOP]
>UniRef100_C5LSN8 P35 antigen, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC
           50983 RepID=C5LSN8_9ALVE
          Length = 170

 Score =  114 bits (286), Expect = 4e-24
 Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 9/97 (9%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 57  YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPT 116

Query: 404 -------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                  S  YSP+ P YSP+S + Y P    + + P
Sbjct: 117 SPAYSPTSPAYSPTSPAYSPTSPAYYHPLVTSSDEGP 153

 Score =  111 bits (278), Expect = 4e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 50  YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPT 109

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + Y+P
Sbjct: 110 SPAYSPTSPAYSPTSPA-YSP 129

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1   YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 60

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + Y+P
Sbjct: 61  SPAYSPTSPAYSPTSPA-YSP 80

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 22  YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 81

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + Y+P
Sbjct: 82  SPAYSPTSPAYSPTSPA-YSP 101

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 43  YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 102

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + Y+P
Sbjct: 103 SPSYSPTSPAYSPTSPA-YSP 122

 Score =  101 bits (252), Expect = 4e-20
 Identities = 52/93 (55%), Positives = 64/93 (68%), Gaps = 18/93 (19%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP+
Sbjct: 78  YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 137

Query: 401 T-----------------GYSPSQPGYSPSSTS 354
           +                  YSP+ P YS +S S
Sbjct: 138 SPAYYHPLVTSSDEGPVVRYSPTSPAYSNTSPS 170

[116][TOP]
>UniRef100_B6AG69 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
            RepID=B6AG69_9CRYT
          Length = 1927

 Score =  114 bits (286), Expect = 4e-24
 Identities = 56/90 (62%), Positives = 67/90 (74%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP+YSPTSP YSP+SP YSP+SP+ S TSP+YSP+SP +SP 
Sbjct: 1734 YSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPT 1793

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSPS P YSP+S S      N +   P
Sbjct: 1794 SPNYSPSSPHYSPTSPSYNPASPNYSPSSP 1823

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP+YSPTSP YSP+SP YSP+SP+ S TSP+YSPSSP +SP 
Sbjct: 1748 YSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPT 1807

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  Y+P+ P YSPSS        N +   P
Sbjct: 1808 SPSYNPASPNYSPSSPHYNPASPNYSPSSP 1837

 Score =  113 bits (283), Expect = 9e-24
 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP YSPTSP+YSPTSP YSP+SP YSPSSP+ S TSP Y+P+SP +SPS
Sbjct: 1762 YSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPS 1821

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            +  Y+P+ P YSPSS  QY P
Sbjct: 1822 SPHYNPASPNYSPSS-PQYNP 1841

 Score =  112 bits (279), Expect = 3e-23
 Identities = 56/96 (58%), Positives = 73/96 (76%), Gaps = 8/96 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP+YSP+SP YSPTSPSY+P+SP YSPSSP+ +  SP+YSPSSPQ++P+
Sbjct: 1783 YSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPSSPHYNPASPNYSPSSPQYNPA 1842

Query: 401  -TGYSPSQPGYSPSSTSQYTPK------TNDNKDDP 315
               YSPS P Y+P+S + Y+P       +N N D P
Sbjct: 1843 LPNYSPSSPQYNPTSPN-YSPSSPNYVLSNGNIDSP 1877

 Score =  111 bits (278), Expect = 4e-23
 Identities = 54/83 (65%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP+YSP+SP +SP 
Sbjct: 1720 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPT 1779

Query: 404  STGYSPSQPGYSPSSTSQYTPKT 336
            S  YSP+ P YSP+S + Y+P +
Sbjct: 1780 SPNYSPTSPHYSPTSPN-YSPSS 1801

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP+YSP+SP +SP 
Sbjct: 1706 YSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPT 1765

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1766 SPNYSPTSPHYSPTSPN-YSP 1785

 Score =  110 bits (276), Expect = 6e-23
 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP 
Sbjct: 1699 YSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPT 1758

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S   Y+P
Sbjct: 1759 SPHYSPTSPNYSPTS-PHYSP 1778

 Score =  109 bits (273), Expect = 1e-22
 Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1727 YSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPT 1786

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPSS   Y+P
Sbjct: 1787 SPHYSPTSPNYSPSS-PHYSP 1806

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
 Frame = -2

Query: 572  PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            P SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP+ S TSP YSP+SP +SP S 
Sbjct: 1694 PLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1753

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S + Y+P
Sbjct: 1754 NYSPTSPHYSPTSPN-YSP 1771

 Score =  107 bits (268), Expect = 5e-22
 Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1713 YSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPT 1772

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S   Y+P
Sbjct: 1773 SPHYSPTSPNYSPTS-PHYSP 1792

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 49/78 (62%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
 Frame = -2

Query: 569  SSPY-SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
            SSP+ SPTSP   P SP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP S  
Sbjct: 1681 SSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPH 1740

Query: 395  YSPSQPGYSPSSTSQYTP 342
            YSP+ P YSP+S + Y+P
Sbjct: 1741 YSPTSPHYSPTSPN-YSP 1757

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 46/83 (55%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
 Frame = -2

Query: 569  SSPYSPTSPSYS------PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +S YSPTSP YS       +SP  SPTSP   P SP YSP+SP  S TSP+YSP+SP +S
Sbjct: 1662 TSAYSPTSPVYSGDKDGDSSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYS 1721

Query: 407  P-STGYSPSQPGYSPSSTSQYTP 342
            P S  YSP+ P YSP+S   Y+P
Sbjct: 1722 PTSPHYSPTSPHYSPTS-PHYSP 1743

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 13/94 (13%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTY------------SPSSPYNSGTSP 438
            +SPSSP Y+P  P+YSP+SP Y+PTSP+YSPSSP Y            SPSSP+   +  
Sbjct: 1832 YSPSSPQYNPALPNYSPSSPQYNPTSPNYSPSSPNYVLSNGNIDSPQYSPSSPHYDQSVA 1891

Query: 437  DYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKT 336
             Y P+SP ++ ST  +  +  YSP+S    T K+
Sbjct: 1892 AYHPTSPSYT-STNMAAEEAEYSPTSPLGGTTKS 1924

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 37/114 (32%)
 Frame = -2

Query: 572  PSSPYSPTSP--SYSPTSPSYSPTSPSYSP--------------SSPTYSPSSPYNSG-- 447
            P SP SPTSP   Y+PTSP Y+  SP+Y                ++  YSP+SP  SG  
Sbjct: 1617 PYSPASPTSPLIDYTPTSPIYAVRSPAYGHETEERTKKRYKANIATSAYSPTSPVYSGDK 1676

Query: 446  ------------------TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
                               SP+YSP+SP +SP S  YSP+ P YSP+S   Y+P
Sbjct: 1677 DGDSSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTS-PHYSP 1729

[117][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
            RepID=C1EA31_9CHLO
          Length = 1720

 Score =  113 bits (283), Expect = 9e-24
 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1611 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPT 1670

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1671 SPQYSPTSPQYSPTS-PQYSP 1690

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1590 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1649

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S  QY+P
Sbjct: 1650 SPAYSPTSPAYSPTS-PQYSP 1669

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/102 (56%), Positives = 72/102 (70%), Gaps = 16/102 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SPQ+SP 
Sbjct: 1618 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPT 1677

Query: 404  STGYSPSQPGYSPSS--------------TSQYTPKTNDNKD 321
            S  YSP+ P YSP+S              + QY+P T  + D
Sbjct: 1678 SPQYSPTSPQYSPTSLGLSDADAPTRSPTSPQYSPSTEADGD 1719

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1527 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1586

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1587 SPAYSPTSPAYSPTSPA-YSP 1606

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1548 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1607

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1608 SPAYSPTSPAYSPTSPA-YSP 1627

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1569 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1628

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1629 SPAYSPTSPAYSPTSPA-YSP 1648

 Score =  106 bits (264), Expect = 1e-21
 Identities = 51/77 (66%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP S  Y
Sbjct: 1524 SPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1583

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S + Y+P
Sbjct: 1584 SPTSPAYSPTSPA-YSP 1599

[118][TOP]
>UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
            patens RepID=A9TK89_PHYPA
          Length = 1646

 Score =  113 bits (283), Expect = 9e-24
 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP YSP+SP  S TSP Y+P+SP +SP 
Sbjct: 1549 YSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPT 1608

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP+ P YSP+S S Y+P +   K  P
Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSPTSPAYKHKP 1637

 Score =  111 bits (278), Expect = 4e-23
 Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP  S TSP YSP+SP ++P 
Sbjct: 1542 YSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPT 1601

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S S Y+P
Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621

 Score =  109 bits (273), Expect = 1e-22
 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP SP YSPTSP YSPTSP YSPTSP YSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1535 YSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPT 1594

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S S Y+P
Sbjct: 1595 SPSYAPTSPSYSPTSPS-YSP 1614

 Score =  108 bits (270), Expect = 3e-22
 Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581  RFSP---SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            +FSP   S P+SP+SP YSP+SP YSP SP YSP+SP YSP+SP  S TSP YSP+SP +
Sbjct: 1511 QFSPYVGSMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSY 1570

Query: 410  SP-STGYSPSQPGYSPSSTSQYTP 342
            SP S GYSP+ PGYSP+S S Y+P
Sbjct: 1571 SPTSPGYSPTSPGYSPTSPS-YSP 1593

 Score =  108 bits (269), Expect = 4e-22
 Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSP SP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1528 YSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPT 1587

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P Y+P+S S Y+P
Sbjct: 1588 SPSYSPTSPSYAPTSPS-YSP 1607

 Score =  105 bits (262), Expect = 3e-21
 Identities = 50/76 (65%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP+Y+P+SP  S TSP YSP+SP +SP 
Sbjct: 1563 YSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPT 1622

Query: 404  STGYSPSQPGYSPSST 357
            S  YSP+ P Y    T
Sbjct: 1623 SPSYSPTSPAYKHKPT 1638

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 47/82 (57%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
 Frame = -2

Query: 575  SPSSPYSPTSPS-YSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            SPS   SP S + +SP   S  +SP+SP YSPSSP YSP SP  S TSP YSP+SP +SP
Sbjct: 1499 SPSLRASPLSEAQFSPYVGSMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSP 1558

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S GYSP+ P YSP+S   Y+P
Sbjct: 1559 TSPGYSPTSPSYSPTSPG-YSP 1579

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 39/90 (43%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPT--SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            SPS   SP+  +   +   +SP   S  +SPSSP YSPSSP  S  SP YSP+SP     
Sbjct: 1493 SPSYLLSPSLRASPLSEAQFSPYVGSMPFSPSSPGYSPSSPGYSPLSPGYSPTSP----- 1547

Query: 401  TGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
             GYSP+ PGYSP+S        + +   PG
Sbjct: 1548 -GYSPTSPGYSPTSPGYSPTSPSYSPTSPG 1576

[119][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
            RepID=A8IRZ2_CHLRE
          Length = 1789

 Score =  113 bits (282), Expect = 1e-23
 Identities = 55/82 (67%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            R+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1563 RYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1622

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S + Y+P
Sbjct: 1623 TSPAYSPTSPAYSPTSPA-YSP 1643

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1557 YSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1616

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1617 SPAYSPTSPAYSPTSPA-YSP 1636

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/84 (64%), Positives = 68/84 (80%), Gaps = 5/84 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1585 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1644

Query: 404  STGYSPSQPGYSPS---STSQYTP 342
            S  YSP+ P YSP+   ++ QY+P
Sbjct: 1645 SPAYSPTSPAYSPAYSPTSPQYSP 1668

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1550 YSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1609

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1610 SPAYSPTSPAYSPTSPA-YSP 1629

 Score =  109 bits (272), Expect = 2e-22
 Identities = 52/76 (68%), Positives = 64/76 (84%), Gaps = 1/76 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP+
Sbjct: 1599 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPA 1658

Query: 401  TGYSPSQPGYSPSSTS 354
              YSP+ P YSP+S S
Sbjct: 1659 --YSPTSPQYSPTSPS 1672

 Score =  106 bits (265), Expect = 1e-21
 Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
 Frame = -2

Query: 572  PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            P SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1545 PMSPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1604

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S + Y+P
Sbjct: 1605 AYSPTSPAYSPTSPA-YSP 1622

 Score =  104 bits (259), Expect = 6e-21
 Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+    S TSP YSP+SP  SP 
Sbjct: 1620 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPA---YSPTSPQYSPTSPSMSPT 1676

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNK 324
            S  YSP+ P YSP+S + Y+P T   +
Sbjct: 1677 SPRYSPTSPNYSPTSPN-YSPSTRQRR 1702

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSP----TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            +SP+SP YSPTSP+YSP    TSP YSPTSPS SP+SP YSP+SP  S TSP+YSPS+ Q
Sbjct: 1641 YSPTSPAYSPTSPAYSPAYSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPTSPNYSPSTRQ 1700

Query: 413  FSPSTGYSPSQPGYSPSSTSQYTP 342
               ST   P+  G   ++  Q  P
Sbjct: 1701 RRRSTRPRPTSLGRRRAARVQAAP 1724

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/124 (37%), Positives = 61/124 (49%), Gaps = 53/124 (42%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSP----TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            +SP+SP YSPTSP+YSPTSP+YSP    TSP YSP+SP+ SP+SP  S TSP+YSP+SP 
Sbjct: 1634 YSPTSPAYSPTSPAYSPTSPAYSPAYSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPTSPN 1693

Query: 413  FSPST------------------------------------------------GYSPSQP 378
            +SPST                                                 + P++P
Sbjct: 1694 YSPSTRQRRRSTRPRPTSLGRRRAARVQAAPTPAPPTAPPRMSAPSTHLAPPSAHPPTRP 1753

Query: 377  GYSP 366
              +P
Sbjct: 1754 RRAP 1757

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 41/79 (51%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
 Frame = -2

Query: 566  SPYSPTSP-SYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
            S +SP  P ++SP        P SP YSP+SP YSP+SP  S TSP YSP+SP +SP S 
Sbjct: 1524 SGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSP 1583

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YSP+S + Y+P
Sbjct: 1584 AYSPTSPAYSPTSPA-YSP 1601

[120][TOP]
>UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
            RepID=Q7Q3C6_ANOGA
          Length = 1878

 Score =  113 bits (282), Expect = 1e-23
 Identities = 57/86 (66%), Positives = 68/86 (79%), Gaps = 7/86 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SPSSP YSPTSPSYSPTSPSYSPTSP+++P +P+YSPSSP  S TSP YSP+SP +SPS
Sbjct: 1679 YSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPS 1738

Query: 401  T-GYSPSQPGYSPSSTS-----QYTP 342
            +  YSP+ P YSP+S S      YTP
Sbjct: 1739 SPKYSPTSPSYSPTSPSYIGSPHYTP 1764

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SP +SPTSPSYSPSSP+YSP+SP  S TSP YSP+SP F+P 
Sbjct: 1651 YSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPV 1710

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            T  YSPS P YSP+S   Y+P
Sbjct: 1711 TPSYSPSSPNYSPTS-PHYSP 1730

 Score =  111 bits (277), Expect = 5e-23
 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP +SPTSPSYSP+SPSYSPTSPSYSP+SP+YSP+SP  +  +P YSPSSP +SP 
Sbjct: 1665 YSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPT 1724

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSPSS  +Y+P
Sbjct: 1725 SPHYSPASPSYSPSS-PKYSP 1744

 Score =  106 bits (264), Expect = 1e-21
 Identities = 51/83 (61%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSP+SP +SPTSPSYSP+SPSYSP+SP+YSP+SP  S TSP+++P +P +SPS
Sbjct: 1658 YSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPS 1717

Query: 401  T-GYSPSQPGYSPSSTSQYTPKT 336
            +  YSP+ P YSP+S S Y+P +
Sbjct: 1718 SPNYSPTSPHYSPASPS-YSPSS 1739

 Score =  101 bits (251), Expect = 5e-20
 Identities = 51/88 (57%), Positives = 62/88 (70%), Gaps = 7/88 (7%)
 Frame = -2

Query: 578  FSPSSPYSPTS------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SP SP  PTS      P YSPTSPSYSPTSPSYSPSSP +SP+SP  S +SP YSP+SP
Sbjct: 1632 YSPMSPMHPTSASNFASPGYSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSP 1691

Query: 416  QFSP-STGYSPSQPGYSPSSTSQYTPKT 336
             +SP S  YSP+ P ++P  T  Y+P +
Sbjct: 1692 SYSPTSPSYSPTSPNFTP-VTPSYSPSS 1718

 Score =  101 bits (251), Expect = 5e-20
 Identities = 53/99 (53%), Positives = 69/99 (69%), Gaps = 15/99 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411
            +SP+SP ++P +PSYSP+SP+YSPTSP YSP+SP+YSPSSP  S TSP YSP+SP +   
Sbjct: 1700 YSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSPKYSPTSPSYSPTSPSYIGS 1759

Query: 410  ------SPSTG-----YSPSQPGYSPSSTSQYTPKTNDN 327
                  SP  G     YSP+ P YSPSS  Q++P ++ N
Sbjct: 1760 PHYTPASPQYGQASPNYSPTSPSYSPSS-PQHSPGSSSN 1797

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 47/79 (59%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP SPSYSP+SP YSPTSPSYSP+SP+Y   SP+ +  SP Y  +SP +SP 
Sbjct: 1721 YSPTSPHYSPASPSYSPSSPKYSPTSPSYSPTSPSYI-GSPHYTPASPQYGQASPNYSPT 1779

Query: 404  STGYSPSQPGYSPSSTSQY 348
            S  YSPS P +SP S+S +
Sbjct: 1780 SPSYSPSSPQHSPGSSSNH 1798

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 53/103 (51%), Positives = 63/103 (61%), Gaps = 24/103 (23%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSY------SPSSPTYSPSSPYNSGTSPDYSPSS 420
            +SP+SP YSP+SP YSPTSPSYSPTSPSY      +P+SP Y  +SP  S TSP YSPSS
Sbjct: 1728 YSPASPSYSPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSS 1787

Query: 419  PQFSPSTG-----------------YSPSQPGYSPSSTSQYTP 342
            PQ SP +                  YSP+   YSPSS  +Y+P
Sbjct: 1788 PQHSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYSPSS-PKYSP 1829

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 51/100 (51%), Positives = 61/100 (61%), Gaps = 19/100 (19%)
 Frame = -2

Query: 578  FSPSSP-YSPTSP-----SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SPSSP Y+P SP     SYSPTSP YSP SP YSP S  YSPSSP     + +YSP+SP
Sbjct: 1571 YSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPNIHSATQNYSPTSP 1630

Query: 416  QFSP-------------STGYSPSQPGYSPSSTSQYTPKT 336
             +SP             S GYSP+ P YSP+S S Y+P +
Sbjct: 1631 SYSPMSPMHPTSASNFASPGYSPTSPSYSPTSPS-YSPSS 1669

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 53/122 (43%), Positives = 67/122 (54%), Gaps = 35/122 (28%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSP------------------------------SYS 492
            ++P+SP Y   SP+YSPTSPSYSP+SP                              SYS
Sbjct: 1762 YTPASPQYGQASPNYSPTSPSYSPSSPQHSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYS 1821

Query: 491  PSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPG---YSPSSTSQYTPKTNDNK 324
            PSSP YSP+SP  + +SP YSPSSP +SP+  GYSPS P    YSP+S     P  +D+ 
Sbjct: 1822 PSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPSSPASPTYSPTS-----PSYDDSN 1876

Query: 323  DD 318
            +D
Sbjct: 1877 ED 1878

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 47/88 (53%), Positives = 56/88 (63%), Gaps = 7/88 (7%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP  P SP+ SPSYSP+SP+Y+P SP     SYSP+SP YSP SP  S  S +YSPSSP 
Sbjct: 1558 SPYPPSSPSMSPSYSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPN 1617

Query: 413  FSPST-GYSPSQPGYSPSSTSQYTPKTN 333
               +T  YSP+ P YSP S    T  +N
Sbjct: 1618 IHSATQNYSPTSPSYSPMSPMHPTSASN 1645

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 46/90 (51%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-P 405
            R SPSSP     PS SP  PS    SPSYSPSSP Y+P+SP   G SP YSP+SP +S P
Sbjct: 1547 RGSPSSP----GPSMSPYPPSSPSMSPSYSPSSPNYAPNSP--GGASPSYSPTSPGYSPP 1600

Query: 404  STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            S  YSP    YSPSS + ++   N +   P
Sbjct: 1601 SPQYSPGSSNYSPSSPNIHSATQNYSPTSP 1630

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 18/101 (17%)
 Frame = -2

Query: 578  FSPSSPYS---PTSPSYSPTSPS---------YSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
            +SPS P S   P  PS+SP++ S         +SP   S S   P+ SP  P +   SP 
Sbjct: 1511 WSPSGPASGMTPGGPSFSPSAQSDASGMSPSSWSPIRGSPSSPGPSMSPYPPSSPSMSPS 1570

Query: 434  YSPSSPQFSP------STGYSPSQPGYSPSSTSQYTPKTND 330
            YSPSSP ++P      S  YSP+ PGYSP S  QY+P +++
Sbjct: 1571 YSPSSPNYAPNSPGGASPSYSPTSPGYSPPS-PQYSPGSSN 1610

[121][TOP]
>UniRef100_Q4QZ03 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum tuberosum
           RepID=Q4QZ03_SOLTU
          Length = 361

 Score =  112 bits (280), Expect = 2e-23
 Identities = 57/81 (70%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP  S TSP YSP+SP +SP 
Sbjct: 130 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 189

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+   YSP+S S Y+P
Sbjct: 190 SPSYSPTSSSYSPTSPS-YSP 209

 Score =  111 bits (278), Expect = 4e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +SP+SP YSPTSP+YSPTSP+YSPT PSYSP+ P+YSP+SP  S TSP YSP+SP +SP+
Sbjct: 214 YSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPT 273

Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
              YSP+ PGYSP+S S Y+P
Sbjct: 274 FPAYSPTSPGYSPTSPS-YSP 293

 Score =  110 bits (275), Expect = 8e-23
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+S +YSP+SP  S TSP YSP+SP +SP 
Sbjct: 165 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPT 224

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+  S Y+P
Sbjct: 225 SPAYSPTSPAYSPTLPS-YSP 244

 Score =  110 bits (275), Expect = 8e-23
 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSPTSPSYSPTSPSYSPTS SYSP+SP+YSP+SP  S TSP YSP+SP +SP 
Sbjct: 172 YSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPT 231

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+  S Y+P
Sbjct: 232 SPAYSPTLPSYSPTLPS-YSP 251

 Score =  108 bits (270), Expect = 3e-22
 Identities = 56/92 (60%), Positives = 67/92 (72%), Gaps = 13/92 (14%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS------- 423
           +SP+SP YSPTSPSYSPT P+YSPTSP YSP+SP+YSP+SP  S TSP Y+PS       
Sbjct: 256 YSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSL 315

Query: 422 -----SPQFSPSTGYSPSQPGYSPSSTSQYTP 342
                SP+ SPS+ YSPS P YSP+S S Y+P
Sbjct: 316 AYSPTSPKLSPSSPYSPSSPSYSPTSPS-YSP 346

 Score =  108 bits (269), Expect = 4e-22
 Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 6/87 (6%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +SP+SP YSPTSPSYSPTSPSYSPT P+YSP+SP YSP+SP  S TSP YSP+SP ++PS
Sbjct: 249 YSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPS 308

Query: 401 TGYSPSQPGYSPSS-----TSQYTPKT 336
             YSPS   YSP+S     +S Y+P +
Sbjct: 309 ARYSPSL-AYSPTSPKLSPSSPYSPSS 334

 Score =  107 bits (268), Expect = 5e-22
 Identities = 53/81 (65%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+S   S TSP YSP+SP +SP 
Sbjct: 158 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPT 217

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + Y+P
Sbjct: 218 SPAYSPTSPAYSPTSPA-YSP 237

 Score =  107 bits (268), Expect = 5e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP+ P YSPT PSYSPTSPSYSPTSPSYSP+SP+YSP+ P  S TSP YSP+SP +SP 
Sbjct: 235 YSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPT 294

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P Y+PS  ++Y+P
Sbjct: 295 SPSYSPTSPSYNPS--ARYSP 313

 Score =  107 bits (266), Expect = 9e-22
 Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSP-SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SP SS YSPTSPSYSPTSP YSPTSP+YSP+SP YSP+SP  S T P YSP+ P +SP 
Sbjct: 193 YSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPT 252

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S S Y+P
Sbjct: 253 SPSYSPTSPSYSPTSPS-YSP 272

 Score =  106 bits (265), Expect = 1e-21
 Identities = 51/81 (62%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP  S TS  YSP+SP +SP+
Sbjct: 151 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPT 210

Query: 401 TG-YSPSQPGYSPSSTSQYTP 342
           +  YSP+ P YSP+S + Y+P
Sbjct: 211 SPIYSPTSPAYSPTSPA-YSP 230

 Score =  106 bits (264), Expect = 1e-21
 Identities = 54/85 (63%), Positives = 65/85 (76%), Gaps = 3/85 (3%)
 Frame = -2

Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           FSP+S   YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP  S TSP YSPSSP +SP
Sbjct: 115 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 174

Query: 404 -STGYSPSQPGYSPSSTSQYTPKTN 333
            S  YSP+ P YSP+S S Y+P ++
Sbjct: 175 TSPAYSPTSPSYSPTSPS-YSPTSS 198

 Score =  101 bits (252), Expect = 4e-20
 Identities = 56/86 (65%), Positives = 62/86 (72%), Gaps = 14/86 (16%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPS------------SPTYSPSSPYNSGTSP 438
           +SP+SP YSPTSPSYSPTSPSYSPTSPSY+PS            SP  SPSSPY S +SP
Sbjct: 277 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPY-SPSSP 335

Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPS 363
            YSP+SP +SP S  YSPS P YSPS
Sbjct: 336 SYSPTSPSYSPTSPSYSPSSPTYSPS 361

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423
           +SP+SP YSPTSP+YSPT PSYSPT PSYSP+SP       +YSP+SP  S T P YSP+
Sbjct: 221 YSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPT 280

Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           SP +SP S  YSP+ P YSP+S S Y P
Sbjct: 281 SPGYSPTSPSYSPTSPSYSPTSPS-YNP 307

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
 Frame = -2

Query: 542 SYSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369
           ++SPTS P YSP+SP YSPSSP YSP+SP  S TSP YSP+SP +SP S  YSPS PGYS
Sbjct: 114 AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 173

Query: 368 PSSTSQYTP 342
           P+S + Y+P
Sbjct: 174 PTSPA-YSP 181

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 36/39 (92%), Positives = 38/39 (97%)
 Frame = -2

Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS 465
           + SPSSPYSP+SPSYSPTSPSYSPTSPSYSPSSPTYSPS
Sbjct: 323 KLSPSSPYSPSSPSYSPTSPSYSPTSPSYSPSSPTYSPS 361

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 38/59 (64%), Positives = 42/59 (71%), Gaps = 6/59 (10%)
 Frame = -2

Query: 581 RFSPSSPYSPTSPS------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
           R+SPS  YSPTSP       YSP+SPSYSPTSPSYSP+SP+YSPS       SP YSPS
Sbjct: 310 RYSPSLAYSPTSPKLSPSSPYSPSSPSYSPTSPSYSPTSPSYSPS-------SPTYSPS 361

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 42/87 (48%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
 Frame = -2

Query: 575 SPSSPYSP-TSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQ 414
           SP+   SP T   +SP     ++SPTS      SP YSPSSP   G   +SP YSP+SP 
Sbjct: 93  SPNMRMSPITDAQFSPYVGGMAFSPTS------SPGYSPSSP---GYSPSSPGYSPTSPG 143

Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKT 336
           +SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 144 YSPTSPGYSPTSPGYSPTSPT-YSPSS 169

[122][TOP]
>UniRef100_Q58EF0 Polr2a protein (Fragment) n=2 Tax=Danio rerio RepID=Q58EF0_DANRE
          Length = 161

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/100 (54%), Positives = 74/100 (74%), Gaps = 12/100 (12%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           ++SP+SP YSPTSP+YSPT+P YSPTSP+YSP+SPTY+P+SP  S TSP YSP+SP++SP
Sbjct: 59  KYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSP 118

Query: 404 S-----------TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
           +           + YSP+ PGYSP+S + Y+P  + +  D
Sbjct: 119 TSPTYSPTSPKGSTYSPTSPGYSPTSPT-YSPAISPDDSD 157

 Score =  110 bits (274), Expect = 1e-22
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 52  KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSP 111

Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
            S  YSP+ P YSP+S   S Y+P
Sbjct: 112 TSPKYSPTSPTYSPTSPKGSTYSP 135

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 11  YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 70

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + Y+P
Sbjct: 71  SPTYSPTTPKYSPTSPT-YSP 90

 Score =  108 bits (270), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 3   RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 62

Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP +T +Y+P
Sbjct: 63  TSPKYSPTSPTYSP-TTPKYSP 83

 Score =  108 bits (270), Expect = 3e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 39  YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPT 98

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S  +Y+P
Sbjct: 99  SPKYSPTSPTYSPTS-PKYSP 118

 Score =  103 bits (256), Expect = 1e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 31  KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 90

Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S + Y+P
Sbjct: 91  TSPTYTPTSPKYSPTSPT-YSP 111

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 42/69 (60%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
 Frame = -2

Query: 545 PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369
           P Y+P SP+Y+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P S  YSP+ P YS
Sbjct: 2   PRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 61

Query: 368 PSSTSQYTP 342
           P+S  +Y+P
Sbjct: 62  PTS-PKYSP 69

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/80 (52%), Positives = 59/80 (73%), Gaps = 5/80 (6%)
 Frame = -2

Query: 560 YSPTSPSYSPTSP----SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
           Y+P SP+Y+        SYSP+SPSYSP+SP Y+P+SP  S +SP+Y+P+SP++SP S  
Sbjct: 4   YTPQSPTYT----PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPK 59

Query: 395 YSPSQPGYSPSSTSQYTPKT 336
           YSP+ P YSP+S + Y+P T
Sbjct: 60  YSPTSPKYSPTSPT-YSPTT 78

[123][TOP]
>UniRef100_O96452 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
            RepID=O96452_ANTLO
          Length = 1553

 Score =  111 bits (277), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1439 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1498

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1499 SPAYSPTSPAYSPTSPA-YSP 1518

 Score =  107 bits (267), Expect = 7e-22
 Identities = 51/78 (65%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1460 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1519

Query: 404  STGYSPSQPGYSPSSTSQ 351
            S  YSP+ P Y PS+ ++
Sbjct: 1520 SPAYSPTSPVYRPSTRAK 1537

 Score =  106 bits (265), Expect = 1e-21
 Identities = 51/76 (67%), Positives = 62/76 (81%), Gaps = 1/76 (1%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390
            S YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP S  YS
Sbjct: 1437 SVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYS 1496

Query: 389  PSQPGYSPSSTSQYTP 342
            P+ P YSP+S + Y+P
Sbjct: 1497 PTSPAYSPTSPA-YSP 1511

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP + PS
Sbjct: 1474 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPVYRPS 1533

Query: 401  TGYSPSQPGYS 369
            T       G++
Sbjct: 1534 TRAKDQDQGFN 1544

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 11/89 (12%)
 Frame = -2

Query: 575  SPSSPYSP---------TSPS-YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
            S S P+SP         T+PS YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP
Sbjct: 1417 SSSVPFSPIAAHGYAAGTTPSVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1476

Query: 425  SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP +SP S  YSP+ P YSP+S + Y+P
Sbjct: 1477 TSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1504

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 19/91 (20%)
 Frame = -2

Query: 557  SPTSP-SYSPTSPS-----------------YSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
            SP S   Y  +S                   YSPTSP+YSP+SP YSP+SP  S TSP Y
Sbjct: 1408 SPVSDVRYGSSSVPFSPIAAHGYAAGTTPSVYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1467

Query: 431  SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP+SP +SP S  YSP+ P YSP+S + Y+P
Sbjct: 1468 SPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1497

[124][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
            macrandra RepID=Q9C428_9FUNG
          Length = 1603

 Score =  110 bits (276), Expect = 6e-23
 Identities = 53/72 (73%), Positives = 61/72 (84%), Gaps = 2/72 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SP+SP YSPTSPSYSPTSPSY+PTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1532 SPTSPGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1591

Query: 401  TGYSPSQPGYSP 366
              YSP+ P YSP
Sbjct: 1592 PSYSPTSPSYSP 1603

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 49/76 (64%), Positives = 58/76 (76%), Gaps = 4/76 (5%)
 Frame = -2

Query: 557  SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQP 378
            SPTSP YSPTSPSYSPTSPSY+P+SP+YSP+SP  S TSP YSP+SP +SP+   SPS  
Sbjct: 1532 SPTSPGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPSYS 1588

Query: 377  ----GYSPSSTSQYTP 342
                 YSP+S S Y+P
Sbjct: 1589 PTSPSYSPTSPS-YSP 1603

[125][TOP]
>UniRef100_UPI00006A20E2 DNA-directed RNA polymerase II subunit RPB1 (EC 2.7.7.6) (RNA
           polymerase II subunit B1) (DNA-directed RNA polymerase
           II subunit A) (DNA-directed RNA polymerase III largest
           subunit). n=1 Tax=Xenopus (Silurana) tropicalis
           RepID=UPI00006A20E2
          Length = 162

 Score =  110 bits (275), Expect = 8e-23
 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP  + TSP YSP+SP +SP
Sbjct: 51  KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 110

Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
            S  YSP+ P YSP+S   S Y+P
Sbjct: 111 TSPKYSPTSPTYSPTSPKGSTYSP 134

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP  S TSP YSP+SP++SP 
Sbjct: 10  YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 69

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S + Y+P
Sbjct: 70  SPTYSPTTPKYSPTSPT-YSP 89

 Score =  108 bits (270), Expect = 3e-22
 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP  + TSP YSP+SP++SP
Sbjct: 2   RYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 61

Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP +T +Y+P
Sbjct: 62  TSPKYSPTSPTYSP-TTPKYSP 82

 Score =  108 bits (269), Expect = 4e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P  S TSP YSP+SP ++P 
Sbjct: 38  YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 97

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S  +Y+P
Sbjct: 98  SPKYSPTSPTYSPTS-PKYSP 117

 Score =  107 bits (267), Expect = 7e-22
 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 65  KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 124

Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
           +    + YSP+ PGYSP+S +        + DD
Sbjct: 125 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 157

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP  S T+P YSP+SP +SP
Sbjct: 30  KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 89

Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
            S  Y+P+ P YSP+S + Y+P
Sbjct: 90  TSPVYTPTSPKYSPTSPT-YSP 110

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
           ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP  S TSP    YSP+SP 
Sbjct: 79  KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 138

Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
           +SP S  YS + P  SP  + +
Sbjct: 139 YSPTSPTYSLTSPAISPDDSDE 160

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 43/69 (62%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
 Frame = -2

Query: 545 PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369
           P Y+P SPSY+P+SPSYSPSSP+YSP+SP  + TSP YSPSSP+++P S  YSP+ P YS
Sbjct: 1   PRYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 60

Query: 368 PSSTSQYTP 342
           P+S  +Y+P
Sbjct: 61  PTS-PKYSP 68

[126][TOP]
>UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
            RepID=C5Y387_SORBI
          Length = 1874

 Score =  109 bits (272), Expect = 2e-22
 Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP S SYSPTSP YSPTSPSYSP+S +YSP+SP+ S TSP YSPSSP +SP 
Sbjct: 1673 YSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPSYSPT 1732

Query: 404  -------STGYSPSQPGYSPSSTSQYTP 342
                   S GYSP+ PGYSP+S + Y+P
Sbjct: 1733 SPTYSPTSLGYSPTSPGYSPTSPT-YSP 1759

 Score =  102 bits (255), Expect = 2e-20
 Identities = 55/91 (60%), Positives = 65/91 (71%), Gaps = 11/91 (12%)
 Frame = -2

Query: 581  RFSPSSP----------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
            R++PSSP          YSP S SYSPTSP YSPTSPSYSP+S +YSP+SP+ S TSP Y
Sbjct: 1642 RYNPSSPSFSPTSTSPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSY 1701

Query: 431  SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP+S  +SP S  YSP+ P YSPSS S Y+P
Sbjct: 1702 SPASLSYSPTSPFYSPTSPSYSPSSPS-YSP 1731

 Score =  101 bits (252), Expect = 4e-20
 Identities = 53/90 (58%), Positives = 63/90 (70%), Gaps = 9/90 (10%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP        YSPTSP YSPTSPSYSP+SPSYSP+SPTYSP+S   S TSP YSP+
Sbjct: 1694 YSPTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPT 1753

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
            SP +SP S  YSP+ P Y+ S T   +  T
Sbjct: 1754 SPTYSPTSPNYSPTSPSYNLSYTEYNSSNT 1783

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 52/112 (46%), Positives = 67/112 (59%), Gaps = 24/112 (21%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411
            +SP+SP YSP+SPSYSPTSP+YSPTS  YSP+SP YSP+SP  S TSP+YSP+SP +   
Sbjct: 1715 YSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLS 1774

Query: 410  --------------------SPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                                S +  YSP+ P YSP+S S   P  + + + P
Sbjct: 1775 YTEYNSSNTYSPTRPRITLDSQAPDYSPTSPTYSPTSPSYSLPSLSYSPNRP 1826

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 55/122 (45%), Positives = 65/122 (53%), Gaps = 39/122 (31%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY-------------SPT---------SPSYSPSSPTYSP 468
            +SP+SP YSPTSP+YSPTSPSY             SPT         +P YSP+SPTYSP
Sbjct: 1750 YSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSSNTYSPTRPRITLDSQAPDYSPTSPTYSP 1809

Query: 467  SSPYNS----------------GTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKT 336
            +SP  S                  SPDYSP+SP FSP+   SP+   YSPSST Q   K 
Sbjct: 1810 TSPSYSLPSLSYSPNRPTDDSGRPSPDYSPTSPNFSPNRSDSPTAADYSPSSTGQAIEKD 1869

Query: 335  ND 330
             +
Sbjct: 1870 GE 1871

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 54/132 (40%), Positives = 64/132 (48%), Gaps = 54/132 (40%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP---------------YNSG 447
            +SPSSP YSPTSP+YSPTS  YSPTSP YSP+SPTYSP+SP               YNS 
Sbjct: 1722 YSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSS 1781

Query: 446  ---------------------TSPDYSPSSPQFS-----------------PSTGYSPSQ 381
                                 TSP YSP+SP +S                 PS  YSP+ 
Sbjct: 1782 NTYSPTRPRITLDSQAPDYSPTSPTYSPTSPSYSLPSLSYSPNRPTDDSGRPSPDYSPTS 1841

Query: 380  PGYSPSSTSQYT 345
            P +SP+ +   T
Sbjct: 1842 PNFSPNRSDSPT 1853

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 50/106 (47%), Positives = 63/106 (59%), Gaps = 27/106 (25%)
 Frame = -2

Query: 578  FSPSSP-YSPTSP------SYSPTSPSYSP-------------------TSPSYSPSSPT 477
            ++P SP YSPT+P      SYS  SP Y+P                   TSPSYSP+S +
Sbjct: 1606 YTPMSPVYSPTTPVSSQIQSYSSASPIYNPISPNSSRYNPSSPSFSPTSTSPSYSPASAS 1665

Query: 476  YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            YSP+SP+ S TSP YSP+S  +SP S  YSP+ P YSP+S S Y+P
Sbjct: 1666 YSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLS-YSP 1710

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 19/97 (19%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSP------TYSPSSPYNSGTSPD---YSPS 423
            S S+ Y+P SP YSPT+P Y+P SP YSP++P      +YS +SP  +  SP+   Y+PS
Sbjct: 1587 STSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNPISPNSSRYNPS 1646

Query: 422  SPQFSP----------STGYSPSQPGYSPSSTSQYTP 342
            SP FSP          S  YSP+ P YSP+S S Y+P
Sbjct: 1647 SPSFSPTSTSPSYSPASASYSPTSPFYSPTSPS-YSP 1682

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 11/86 (12%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP------DYSPSSPQFSP 405
            +PY+  SP  + TS SY+P SP YSP++P Y+P SP  S T+P       YS +SP ++P
Sbjct: 1576 TPYNAASPVNASTSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNP 1635

Query: 404  ----STGYSPSQPGYSPSSTS-QYTP 342
                S+ Y+PS P +SP+STS  Y+P
Sbjct: 1636 ISPNSSRYNPSSPSFSPTSTSPSYSP 1661

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
 Frame = -2

Query: 560  YSPTSPSYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYS 390
            Y   SP Y+P    SP  + TS SY+P SP YSP++P  +  SP YSP++P  S    YS
Sbjct: 1568 YMAVSPIYTPYNAASPVNASTSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYS 1627

Query: 389  PSQPGYSPSS--TSQYTPKT 336
             + P Y+P S  +S+Y P +
Sbjct: 1628 SASPIYNPISPNSSRYNPSS 1647

[127][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
            RepID=C1MI48_9CHLO
          Length = 1694

 Score =  109 bits (272), Expect = 2e-22
 Identities = 54/86 (62%), Positives = 67/86 (77%), Gaps = 7/86 (8%)
 Frame = -2

Query: 578  FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            +SP+SP      YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP
Sbjct: 1556 YSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1615

Query: 416  QFSP-STGYSPSQPGYSPSSTSQYTP 342
             +SP S  YSP+ P YSP+S + Y+P
Sbjct: 1616 AYSPTSPAYSPTSPAYSPTSPA-YSP 1640

 Score =  109 bits (272), Expect = 2e-22
 Identities = 52/75 (69%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1582 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1641

Query: 404  STGYSPSQPGYSPSS 360
            S  YSP+ P YSP+S
Sbjct: 1642 SPAYSPTSPQYSPTS 1656

 Score =  106 bits (264), Expect = 1e-21
 Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 7/86 (8%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-----PSSPTYSPSSPYNSGTSPDYSPSSP 417
            FSP+SP YSPTSP+YSPTSP+YSPTSP+YS     P+SP YSP+SP  S TSP YSP+SP
Sbjct: 1528 FSPTSPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSP 1587

Query: 416  QFSP-STGYSPSQPGYSPSSTSQYTP 342
             +SP S  YSP+ P YSP+S + Y+P
Sbjct: 1588 AYSPTSPAYSPTSPAYSPTSPA-YSP 1612

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 11/98 (11%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SPQ+SP+
Sbjct: 1596 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPT 1655

Query: 401  T----------GYSPSQPGYSPSSTSQYTPKTNDNKDD 318
            +            SP+ P YSP+    ++P     K++
Sbjct: 1656 SVGLSDVENAPTRSPTSPQYSPTE-GAFSPMETTEKEE 1692

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 14/93 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPS-----YSPTSPSYS-------PSSPTYSPSSPYNSGTSP 438
            +SP+SP YSPTSP+YSPTSP+     YSPTSP+YS       P+SP YSP+SP  S TSP
Sbjct: 1542 YSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1601

Query: 437  DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
             YSP+SP +SP S  YSP+ P YSP+S + Y+P
Sbjct: 1602 AYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1633

[128][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
            castellanii RepID=O00820_ACACA
          Length = 1569

 Score =  109 bits (272), Expect = 2e-22
 Identities = 52/74 (70%), Positives = 60/74 (81%), Gaps = 2/74 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SPSSP YSP SP YSP+SP+YSPTSP YSP+SP+YSP+SP  S TSP YSPSSP +SP 
Sbjct: 1496 YSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPSSPSYSPT 1555

Query: 404  STGYSPSQPGYSPS 363
            S  YSP+ P YSPS
Sbjct: 1556 SPSYSPTSPSYSPS 1569

 Score =  108 bits (270), Expect = 3e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SPSSP YSP+SP YSP SP YSP+SP+YSP+SP YSP+SP  S TSP YSP+SP +SPS
Sbjct: 1489 YSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPS 1548

Query: 401  T-GYSPSQPGYSPSSTSQYTP 342
            +  YSP+ P YSP+S S Y+P
Sbjct: 1549 SPSYSPTSPSYSPTSPS-YSP 1568

 Score =  106 bits (264), Expect = 1e-21
 Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP        YSP+SP YSP+SP YSP+SP YSP+SP YSPSSP  S TSP YSP+
Sbjct: 1468 YSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPA 1527

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S  YSP+ P YSPSS S Y+P
Sbjct: 1528 SPSYSPTSPAYSPTSPSYSPSSPS-YSP 1554

 Score =  100 bits (248), Expect = 1e-19
 Identities = 52/80 (65%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SPSSP YSP SP YSP    YSP+SP YSPSSP YSPSSP  S  SP YSPSSP +SP S
Sbjct: 1462 SPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTS 1521

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S + Y+P
Sbjct: 1522 PKYSPASPSYSPTSPA-YSP 1540

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 49/80 (61%), Positives = 55/80 (68%), Gaps = 5/80 (6%)
 Frame = -2

Query: 566  SPYSPTS----PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SP SP      P YSP+SP YSP SP YSPSSP YSP+SP  S  SP YSP+SP +SP S
Sbjct: 1483 SPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTS 1542

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSPS P YSP+S S Y+P
Sbjct: 1543 PSYSPSSPSYSPTSPS-YSP 1561

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 48/85 (56%), Positives = 57/85 (67%), Gaps = 6/85 (7%)
 Frame = -2

Query: 578  FSPSSPYSPTSP-----SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            +SP   +   SP     S SP+SPSYSP SP YSP+   YSPSSP  S +SP YSPSSP 
Sbjct: 1443 YSPYVDFGEFSPGRGSFSPSPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPG 1502

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP S GYSPS P YSP+S  +Y+P
Sbjct: 1503 YSPASPGYSPSSPAYSPTS-PKYSP 1526

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            F  ++P    SP  +P + SYSP      +SP   ++SPS      +SP YSP+SP +SP
Sbjct: 1424 FFHTTPMYRMSPGATPAA-SYSPYVDFGEFSPGRGSFSPSP-----SSPSYSPASPGYSP 1477

Query: 404  S-TGYSPSQPGYSPSSTSQYTPKT 336
            +  GYSPS PGYSPSS   Y+P +
Sbjct: 1478 AGAGYSPSSPGYSPSSPG-YSPSS 1500

[129][TOP]
>UniRef100_A7AWJ0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AWJ0_BABBO
          Length = 1746

 Score =  108 bits (271), Expect = 2e-22
 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1602 YSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1661

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1662 SPAYSPTSPAYSPTSPA-YSP 1681

 Score =  108 bits (269), Expect = 4e-22
 Identities = 52/83 (62%), Positives = 67/83 (80%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP+
Sbjct: 1623 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1682

Query: 401  T---GYSPSQPGYSPSSTSQYTP 342
            +   GY P+ P Y P+S + Y+P
Sbjct: 1683 SPNLGYLPTSPAYRPTSPA-YSP 1704

 Score =  105 bits (262), Expect = 3e-21
 Identities = 54/83 (65%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP 
Sbjct: 1616 YSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1675

Query: 404  STGYSPSQP--GYSPSSTSQYTP 342
            S  YSP+ P  GY P+S + Y P
Sbjct: 1676 SPAYSPTSPNLGYLPTSPA-YRP 1697

 Score =  103 bits (258), Expect = 7e-21
 Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 5/93 (5%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQF 411
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP N G   TSP Y P+SP +
Sbjct: 1644 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP-NLGYLPTSPAYRPTSPAY 1702

Query: 410  SP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP S  YSP+ P YSP+S          + +DP
Sbjct: 1703 SPTSPAYSPTSPAYSPTSPVYSPTSPEYSPEDP 1735

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 49/83 (59%), Positives = 61/83 (73%), Gaps = 4/83 (4%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP YSPTSP+YSPTSP+YSPTSP+  Y P+SP Y P+SP  S TSP YSP+SP +S
Sbjct: 1658 YSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSPAYSPTSPAYSPTSPAYS 1717

Query: 407  PSTG-YSPSQPGYSPSSTSQYTP 342
            P++  YSP+ P YSP       P
Sbjct: 1718 PTSPVYSPTSPEYSPEDPFSPNP 1740

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 48/80 (60%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SP+SP YSPTSP Y      YSP SP+YSP+SP YSP+SP  S TSP YSP+SP +SP S
Sbjct: 1582 SPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTS 1641

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              YSP+ P YSP+S + Y+P
Sbjct: 1642 PAYSPTSPAYSPTSPA-YSP 1660

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 54/109 (49%), Positives = 63/109 (57%), Gaps = 30/109 (27%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSY--------------------SPTSPSYSPTSP-------SYSPS 486
            FSP+  SP SP SPSY                    SPTSP YSPTSP        YSP+
Sbjct: 1546 FSPTIMSPQSPVSPSYAPLSPNPLSPNPLSPSMGMMSPTSPVYSPTSPVYGQAGGVYSPA 1605

Query: 485  SPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP YSP+SP  S TSP YSP+SP +SP S  YSP+ P YSP+S + Y+P
Sbjct: 1606 SPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1653

[130][TOP]
>UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura
            RepID=Q9XZU9_DROSU
          Length = 1889

 Score =  107 bits (266), Expect = 9e-22
 Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SPSYSPTSP YSPSSP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776

 Score =  103 bits (258), Expect = 7e-21
 Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP  S +SP YSP+SP ++P+T
Sbjct: 1667 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPAT 1726

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S    Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 53/110 (48%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
            +SPSSP YSPTSP+Y+P +PSYSPTSP+YS                    P+SPTYSP S
Sbjct: 1708 YSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPS 1767

Query: 461  PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            P   G+         SP YSP+SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  +  SP Y+ ++P 
Sbjct: 1566 SPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPN 1625

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
            F+P STGYSPS  GYSP+S   Y+P +N
Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP YS
Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801

Query: 428  PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
            PSSPQ SPS     TG                YSPS   YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 55/102 (53%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459
            F+P S  YSP++  YSPTSP YSPTS  PS                 YSPSS  YSP+SP
Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
              S TSP YSPSSP +SP S  YSPS P YSP+S + YTP T
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPN-YTPAT 1726

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
            SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+      S TSP       
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832

Query: 437  -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
                    YSP+SP ++P+   YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872

 Score = 87.8 bits (216), Expect = 6e-16
 Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
            +SPS S YSPTSP YSPTS     PS              YSP+S +YSP+SP+YSP+SP
Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692

Query: 458  YNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              S +SP YSP+SP +SPS+  YSP+ P Y+P +T  Y+P + +    P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1740

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+SP +SP+  
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            ++SP+SP YSP SPSY  SP SP Y+P SP YSP+SP YSP+SP  S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813

Query: 410  SP--------STGYSPSQPGYSPSSTSQYTP 342
            SP        S  YSP+   YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F 
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885

Query: 407  PS 402
             S
Sbjct: 1886 ES 1887

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 19/98 (19%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
            FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSP 1577

Query: 437  DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTP 342
             YSP+SP ++ S+       YSPS P YSP+S     P
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615

[131][TOP]
>UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis
            RepID=Q9XZS2_DROMD
          Length = 1889

 Score =  107 bits (266), Expect = 9e-22
 Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SPSYSPTSP YSPSSP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776

 Score =  103 bits (258), Expect = 7e-21
 Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP  S +SP YSP+SP ++P+T
Sbjct: 1667 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPAT 1726

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S    Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 53/110 (48%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
            +SPSSP YSPTSP+Y+P +PSYSPTSP+YS                    P+SPTYSP S
Sbjct: 1708 YSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPS 1767

Query: 461  PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            P   G+         SP YSP+SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  +  SP Y+ ++P 
Sbjct: 1566 SPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPN 1625

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
            F+P STGYSPS  GYSP+S   Y+P +N
Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP YS
Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801

Query: 428  PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
            PSSPQ SPS     TG                YSPS   YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 55/102 (53%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459
            F+P S  YSP++  YSPTSP YSPTS  PS                 YSPSS  YSP+SP
Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
              S TSP YSPSSP +SP S  YSPS P YSP+S + YTP T
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPN-YTPAT 1726

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
            SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+      S TSP       
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832

Query: 437  -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
                    YSP+SP ++P+   YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872

 Score = 87.8 bits (216), Expect = 6e-16
 Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
            +SPS S YSPTSP YSPTS     PS              YSP+S +YSP+SP+YSP+SP
Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692

Query: 458  YNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              S +SP YSP+SP +SPS+  YSP+ P Y+P +T  Y+P + +    P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1740

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+SP +SP+  
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            ++SP+SP YSP SPSY  SP SP Y+P SP YSP+SP YSP+SP  S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813

Query: 410  SP--------STGYSPSQPGYSPSSTSQYTP 342
            SP        S  YSP+   YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F 
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885

Query: 407  PS 402
             S
Sbjct: 1886 ES 1887

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 19/98 (19%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
            FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSP 1577

Query: 437  DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTP 342
             YSP+SP ++ S+       YSPS P YSP+S     P
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615

[132][TOP]
>UniRef100_Q5EXZ8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Periplaneta
           americana RepID=Q5EXZ8_PERAM
          Length = 97

 Score =  107 bits (266), Expect = 9e-22
 Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 10/83 (12%)
 Frame = -2

Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
           +SPSSP         YSP+SPSYSPTSP+YSPTSP YSPSS  YSP+SP  + TSP+YSP
Sbjct: 8   YSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTPTSPNYSP 67

Query: 425 SSPQFSPST-GYSPSQPGYSPSS 360
           SSP +SP+  GYSP+ P YSP+S
Sbjct: 68  SSPTYSPAVPGYSPTSPTYSPTS 90

 Score =  100 bits (249), Expect = 8e-20
 Identities = 53/89 (59%), Positives = 67/89 (75%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPS--------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
           +SP+SP YSP+SP         YSP+SPSYSPTSP+YSP+SP YSPSS   S TSP Y+P
Sbjct: 1   YSPTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTP 60

Query: 425 SSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
           +SP +SPS+  YSP+ PGYSP+S + Y+P
Sbjct: 61  TSPNYSPSSPTYSPAVPGYSPTSPT-YSP 88

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 43/70 (61%), Positives = 56/70 (80%), Gaps = 2/70 (2%)
 Frame = -2

Query: 539 YSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSP 366
           YSPTSPSYSP+SP ++PS+ T YSPSSP  S TSP YSP+SPQ+SPS+  YSP+ P Y+P
Sbjct: 1   YSPTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTP 60

Query: 365 SSTSQYTPKT 336
           +S + Y+P +
Sbjct: 61  TSPN-YSPSS 69

 Score = 85.1 bits (209), Expect = 4e-15
 Identities = 39/57 (68%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
           +SP+SP YSP+S  YSPTSP+Y+PTSP+YSPSSPTYSP+ P  S TSP YSP+SP +
Sbjct: 37  YSPTSPQYSPSSSKYSPTSPTYTPTSPNYSPSSPTYSPAVPGYSPTSPTYSPTSPAY 93

[133][TOP]
>UniRef100_B4R347 RNA polymerase II 215kD subunit n=1 Tax=Drosophila simulans
           RepID=B4R347_DROSI
          Length = 552

 Score =  106 bits (264), Expect = 1e-21
 Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
           +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP  S TSP YSP+SP ++P T
Sbjct: 330 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 389

Query: 398 -GYSPSQPGYSPSSTSQYTP 342
             YSP+ P YS S   QY+P
Sbjct: 390 PSYSPTSPNYSAS--PQYSP 407

 Score =  105 bits (263), Expect = 2e-21
 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 343 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 402

Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
             YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 403 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 439

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 57/111 (51%), Positives = 65/111 (58%), Gaps = 31/111 (27%)
 Frame = -2

Query: 581 RFSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
           ++SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP Y
Sbjct: 404 QYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY 463

Query: 431 SPSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
           SPSSPQ SPS     TG                YSPS   YSP+S + YTP
Sbjct: 464 SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 513

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
           +SP+SP YSPTSP+Y+P +PSYSPTSP+YS                    P+SPTYSP S
Sbjct: 371 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 430

Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
           P   G+         SP YSP+SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 431 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 478

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459
           +SPSS  YSPTSP YSPT     SPS              YSP+S +YSP+SP+YSP+SP
Sbjct: 296 YSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 355

Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
             S +SP YSP+SP +SP S  YSP+ P Y+P  T  Y+P + +    P
Sbjct: 356 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 403

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/108 (44%), Positives = 59/108 (54%), Gaps = 28/108 (25%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-------------SGTSPD 435
           SPS   SP SP Y+P SP YSP SP YSP+SP YSPSSP +             S TSP 
Sbjct: 430 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 489

Query: 434 YSPSSPQFSPST---------------GYSPSQPGYSPSSTSQYTPKT 336
           YSP+   +SPS+                YSP+ P YSP++ S Y+PK+
Sbjct: 490 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKS 537

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 12/90 (13%)
 Frame = -2

Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPY-----NSGTSPDYS 429
           SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP       + T+P+++
Sbjct: 231 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPRYASTTPNFN 290

Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           P S  +SP S+GYSP+ PGYSP++  Q +P
Sbjct: 291 PQSTGYSPSSSGYSPTSPGYSPTAQFQSSP 320

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 48/97 (49%), Positives = 59/97 (60%), Gaps = 23/97 (23%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSP-------------TSPSYSPSSPTYSPSSPYNSGT 444
           ++SP+SP YSPTSP YSP+SP +SP             TSP YSP+   YSPSS   S T
Sbjct: 448 QYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 507

Query: 443 SP-------DYSPSSPQFSPS--TGYSPSQPGYSPSS 360
           SP       +YSP+SP +SP+  + YSP  P YSPSS
Sbjct: 508 SPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSS 544

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 40/121 (33%)
 Frame = -2

Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSP--------------------- 480
           +SP+SP      Y+ T+P+++P S  YSP+S  YSP+SP                     
Sbjct: 270 YSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNI 329

Query: 479 ------------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPK 339
                        YSP+SP  S TSP YSPSSP +SP S  YSP+ P YSP+S + YTP 
Sbjct: 330 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPV 388

Query: 338 T 336
           T
Sbjct: 389 T 389

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 47/96 (48%), Positives = 54/96 (56%), Gaps = 20/96 (20%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP----- 405
           SSP SP  PS SP  P+    SPSYSP+SP Y+ SSP   G SP+YSPSSP +SP     
Sbjct: 221 SSPSSP-GPSMSPYFPASPSVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLY 277

Query: 404 ---------------STGYSPSQPGYSPSSTSQYTP 342
                          STGYSPS  GYSP+S   Y+P
Sbjct: 278 ASPRYASTTPNFNPQSTGYSPSSSGYSPTSPG-YSP 312

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
           R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S  SP YSPSSP F 
Sbjct: 489 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSSPTFE 548

Query: 407 PS 402
            S
Sbjct: 549 ES 550

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
 Frame = -2

Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
           FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 183 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 242

Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTPK 339
            YSP+SP ++ S+       YSPS P YSP+S    +P+
Sbjct: 243 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPR 281

[134][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
            RepID=B4IK28_DROSE
          Length = 1887

 Score =  106 bits (264), Expect = 1e-21
 Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP  S TSP YSP+SP ++P T
Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S   QY+P
Sbjct: 1725 PSYSPTSPNYSAS--PQYSP 1742

 Score =  105 bits (263), Expect = 2e-21
 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1738 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1774

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 57/111 (51%), Positives = 65/111 (58%), Gaps = 31/111 (27%)
 Frame = -2

Query: 581  RFSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
            ++SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP Y
Sbjct: 1739 QYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY 1798

Query: 431  SPSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
            SPSSPQ SPS     TG                YSPS   YSP+S + YTP
Sbjct: 1799 SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1848

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
            +SP+SP YSPTSP+Y+P +PSYSPTSP+YS                    P+SPTYSP S
Sbjct: 1706 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 1765

Query: 461  PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            P   G+         SP YSP+SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
            SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+      S TSP       
Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830

Query: 437  -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
                    YSP+SP ++P+   YSP+ P YSP++ S Y+P
Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1870

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459
            +SPSS  YSPTSP YSPT     SPS              YSP+S +YSP+SP+YSP+SP
Sbjct: 1631 YSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 1690

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              S +SP YSP+SP +SP S  YSP+ P Y+P  T  Y+P + +    P
Sbjct: 1691 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1738

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+SP +SP+  
Sbjct: 1806 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1865

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1866 SHYSPTSPAYSPSS 1879

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 12/90 (13%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPY-----NSGTSPDYS 429
            SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP       + T+P+++
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPRYASTTPNFN 1625

Query: 428  PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P S  +SP S+GYSP+ PGYSP++  Q +P
Sbjct: 1626 PQSTGYSPSSSGYSPTSPGYSPTAQFQSSP 1655

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 40/121 (33%)
 Frame = -2

Query: 578  FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSP--------------------- 480
            +SP+SP      Y+ T+P+++P S  YSP+S  YSP+SP                     
Sbjct: 1605 YSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNI 1664

Query: 479  ------------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPK 339
                         YSP+SP  S TSP YSPSSP +SP S  YSP+ P YSP+S + YTP 
Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPV 1723

Query: 338  T 336
            T
Sbjct: 1724 T 1724

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 47/96 (48%), Positives = 54/96 (56%), Gaps = 20/96 (20%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP----- 405
            SSP SP  PS SP  P+    SPSYSP+SP Y+ SSP   G SP+YSPSSP +SP     
Sbjct: 1556 SSPSSP-GPSMSPYFPASPSVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLY 1612

Query: 404  ---------------STGYSPSQPGYSPSSTSQYTP 342
                           STGYSPS  GYSP+S   Y+P
Sbjct: 1613 ASPRYASTTPNFNPQSTGYSPSSSGYSPTSPG-YSP 1647

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F 
Sbjct: 1824 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1883

Query: 407  PS 402
             S
Sbjct: 1884 ES 1885

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
            FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577

Query: 437  DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTPK 339
             YSP+SP ++ S+       YSPS P YSP+S    +P+
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616

[135][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
            RepID=A9UNH9_DROME
          Length = 1887

 Score =  106 bits (264), Expect = 1e-21
 Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP  S TSP YSP+SP ++P T
Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S   QY+P
Sbjct: 1725 PSYSPTSPNYSAS--PQYSP 1742

 Score =  105 bits (263), Expect = 2e-21
 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1738 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1774

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 58/120 (48%), Positives = 67/120 (55%), Gaps = 31/120 (25%)
 Frame = -2

Query: 581  RFSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
            ++SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP Y
Sbjct: 1739 QYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY 1798

Query: 431  SPSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SPSSPQ SPS     TG                YSPS   YSP+S + YTP   +    P
Sbjct: 1799 SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTPTARNYSPTP 1857

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
            +SP+SP YSPTSP+Y+P +PSYSPTSP+YS                    P+SPTYSP S
Sbjct: 1706 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 1765

Query: 461  PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            P   G+         SP YSP+SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSP 417
            SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+      S TSP YSP+  
Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830

Query: 416  QFSPST---------------GYSPSQPGYSPSSTSQYTP 342
             +SPS+                YSP+ P YSP++ S Y+P
Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSP 1870

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459
            +SPSS  YSPTSP YSPT     SPS              YSP+S +YSP+SP+YSP+SP
Sbjct: 1631 YSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 1690

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              S +SP YSP+SP +SP S  YSP+ P Y+P  T  Y+P + +    P
Sbjct: 1691 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1738

 Score = 85.1 bits (209), Expect = 4e-15
 Identities = 41/74 (55%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+ P +SP+  
Sbjct: 1806 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAP 1865

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1866 SHYSPTSPAYSPSS 1879

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 7/79 (8%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  +  SP Y+ ++P 
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYA--SPRYASTTPN 1623

Query: 413  FSP-STGYSPSQPGYSPSS 360
            F+P STGYSPS  GYSP+S
Sbjct: 1624 FNPQSTGYSPSSSGYSPTS 1642

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 40/121 (33%)
 Frame = -2

Query: 578  FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSP--------------------- 480
            +SP+SP      Y+ T+P+++P S  YSP+S  YSP+SP                     
Sbjct: 1605 YSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNI 1664

Query: 479  ------------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPK 339
                         YSP+SP  S TSP YSPSSP +SP S  YSP+ P YSP+S + YTP 
Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPV 1723

Query: 338  T 336
            T
Sbjct: 1724 T 1724

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+ P YSP++P + S TSP YSPSSP F 
Sbjct: 1824 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSSPTFE 1883

Query: 407  PS 402
             S
Sbjct: 1884 ES 1885

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
            FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577

Query: 437  DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTPK 339
             YSP+SP ++ S+       YSPS P YSP+S    +P+
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616

[136][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
            melanogaster RepID=RPB1_DROME
          Length = 1887

 Score =  106 bits (264), Expect = 1e-21
 Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP  S TSP YSP+SP ++P T
Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S   QY+P
Sbjct: 1725 PSYSPTSPNYSAS--PQYSP 1742

 Score =  105 bits (263), Expect = 2e-21
 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1738 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1774

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 57/111 (51%), Positives = 65/111 (58%), Gaps = 31/111 (27%)
 Frame = -2

Query: 581  RFSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
            ++SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP Y
Sbjct: 1739 QYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY 1798

Query: 431  SPSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
            SPSSPQ SPS     TG                YSPS   YSP+S + YTP
Sbjct: 1799 SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1848

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
            +SP+SP YSPTSP+Y+P +PSYSPTSP+YS                    P+SPTYSP S
Sbjct: 1706 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 1765

Query: 461  PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            P   G+         SP YSP+SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
            SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+      S TSP       
Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830

Query: 437  -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
                    YSP+SP ++P+   YSP+ P YSP++ S Y+P
Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1870

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+SP +SP+  
Sbjct: 1806 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1865

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1866 SHYSPTSPAYSPSS 1879

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459
            +SPSS  YSPTSP YSPT     SPS              YSP+S +YSP+SP+YSP+SP
Sbjct: 1631 YSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 1690

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              S +SP YSP+SP +SP S  YSP+ P Y+P  T  Y+P + +    P
Sbjct: 1691 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1738

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 7/79 (8%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  +  SP Y+ ++P 
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYA--SPRYASTTPN 1623

Query: 413  FSP-STGYSPSQPGYSPSS 360
            F+P STGYSPS  GYSP+S
Sbjct: 1624 FNPQSTGYSPSSSGYSPTS 1642

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 40/121 (33%)
 Frame = -2

Query: 578  FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSP--------------------- 480
            +SP+SP      Y+ T+P+++P S  YSP+S  YSP+SP                     
Sbjct: 1605 YSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNI 1664

Query: 479  ------------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPK 339
                         YSP+SP  S TSP YSPSSP +SP S  YSP+ P YSP+S + YTP 
Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPV 1723

Query: 338  T 336
            T
Sbjct: 1724 T 1724

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F 
Sbjct: 1824 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1883

Query: 407  PS 402
             S
Sbjct: 1884 ES 1885

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
            FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577

Query: 437  DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTPK 339
             YSP+SP ++ S+       YSPS P YSP+S    +P+
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616

[137][TOP]
>UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
            pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS
          Length = 1811

 Score =  105 bits (263), Expect = 2e-21
 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1602 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1661

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1662 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1698

 Score =  105 bits (262), Expect = 3e-21
 Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP  S TSP YSP+SP ++P+T
Sbjct: 1589 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1648

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S    Y+P
Sbjct: 1649 PSYSPTSPNYSAS--PHYSP 1666

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 18/97 (18%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-- 408
            +SPSSP YSPTSP YSPTSPSYSPTSP+Y+P++P+YSP+SP N   SP YSP+SP +S  
Sbjct: 1616 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQT 1674

Query: 407  -------------PSTGY--SPSQPGYSPSSTSQYTP 342
                         PS  Y  SP  P Y+P S  QY+P
Sbjct: 1675 GAKYSPTSPTYSPPSPSYDGSPGSPQYTPGS-PQYSP 1710

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  +  SP Y+ ++P 
Sbjct: 1488 SPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPN 1547

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
            F+P STGYSPS  GYSP+S   Y+P +N
Sbjct: 1548 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1574

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426
            +SP+SP       YSP SP+YS T   YSPTSP+YSP SP+Y  SP SP  +  SP YSP
Sbjct: 1651 YSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1710

Query: 425  SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            +SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1711 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1737

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP YS
Sbjct: 1664 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1723

Query: 428  PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
            PSSPQ SPS     TG                YSPS   YSP+S + YTP
Sbjct: 1724 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1772

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
            SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+      S TSP       
Sbjct: 1695 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1754

Query: 437  -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
                    YSP+SP ++P+   YSP+ P YSP++ S Y+P
Sbjct: 1755 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1794

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459
            F+P S  YSP++  YSPTSP YSPTS  PS                 YSPSS  YSP+SP
Sbjct: 1548 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1607

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
              S TSP YSPSSP +SP S  YSP+ P YSP+S + YTP T
Sbjct: 1608 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1648

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
            +SPS S YSPTSP YSPTS     PS              YSP+S +YSP+SP+YSP+SP
Sbjct: 1555 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1614

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              S +SP YSP+SP +SP S  YSP+ P Y+P +T  Y+P + +    P
Sbjct: 1615 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1662

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+SP +SP+  
Sbjct: 1730 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1789

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1790 SHYSPTSPAYSPSS 1803

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            ++SP+SP YSP SPSY  SP SP Y+P SP YSP+SP YSP+SP  S +SP +SPS+ Q+
Sbjct: 1677 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1735

Query: 410  SP--------STGYSPSQPGYSPSSTSQYTP 342
            SP        S  YSP+   YSPSST +Y+P
Sbjct: 1736 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1765

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F 
Sbjct: 1748 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1807

Query: 407  PS 402
             S
Sbjct: 1808 ES 1809

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
            FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 1440 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSP 1499

Query: 437  DYSPSSPQFSPST------GYSPSQPGYSPSS 360
             YSP+SP ++ S+       YSPS P YSP+S
Sbjct: 1500 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1531

[138][TOP]
>UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche
            RepID=Q9XZS1_DROGU
          Length = 1889

 Score =  105 bits (263), Expect = 2e-21
 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776

 Score =  105 bits (262), Expect = 3e-21
 Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP  S TSP YSP+SP ++P+T
Sbjct: 1667 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S    Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 18/97 (18%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-- 408
            +SPSSP YSPTSP YSPTSPSYSPTSP+Y+P++P+YSP+SP N   SP YSP+SP +S  
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQT 1752

Query: 407  -------------PSTGY--SPSQPGYSPSSTSQYTP 342
                         PS  Y  SP  P Y+P S  QY+P
Sbjct: 1753 GAKYSPTSPTYSPPSPSYDGSPGSPQYTPGS-PQYSP 1788

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  +  SP Y+ ++P 
Sbjct: 1566 SPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPN 1625

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
            F+P STGYSPS  GYSP+S   Y+P +N
Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426
            +SP+SP       YSP SP+YS T   YSPTSP+YSP SP+Y  SP SP  +  SP YSP
Sbjct: 1729 YSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1788

Query: 425  SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            +SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1789 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP YS
Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801

Query: 428  PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
            PSSPQ SPS     TG                YSPS   YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
            SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+      S TSP       
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832

Query: 437  -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
                    YSP+SP ++P+   YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459
            F+P S  YSP++  YSPTSP YSPTS  PS                 YSPSS  YSP+SP
Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
              S TSP YSPSSP +SP S  YSP+ P YSP+S + YTP T
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1726

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
            +SPS S YSPTSP YSPTS     PS              YSP+S +YSP+SP+YSP+SP
Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              S +SP YSP+SP +SP S  YSP+ P Y+P +T  Y+P + +    P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1740

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+SP +SP+  
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            ++SP+SP YSP SPSY  SP SP Y+P SP YSP+SP YSP+SP  S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813

Query: 410  SP--------STGYSPSQPGYSPSSTSQYTP 342
            SP        S  YSP+   YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F 
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885

Query: 407  PS 402
             S
Sbjct: 1886 ES 1887

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 19/98 (19%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
            FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSP 1577

Query: 437  DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTP 342
             YSP+SP ++ S+       YSPS P YSP+S     P
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615

[139][TOP]
>UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
            pseudoobscura RepID=Q29IN2_DROPS
          Length = 1889

 Score =  105 bits (263), Expect = 2e-21
 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776

 Score =  105 bits (262), Expect = 3e-21
 Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP  S TSP YSP+SP ++P+T
Sbjct: 1667 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S    Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 18/97 (18%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-- 408
            +SPSSP YSPTSP YSPTSPSYSPTSP+Y+P++P+YSP+SP N   SP YSP+SP +S  
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQT 1752

Query: 407  -------------PSTGY--SPSQPGYSPSSTSQYTP 342
                         PS  Y  SP  P Y+P S  QY+P
Sbjct: 1753 GAKYSPTSPTYSPPSPSYDGSPGSPQYTPGS-PQYSP 1788

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  +  SP Y+ ++P 
Sbjct: 1566 SPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPN 1625

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
            F+P STGYSPS  GYSP+S   Y+P +N
Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426
            +SP+SP       YSP SP+YS T   YSPTSP+YSP SP+Y  SP SP  +  SP YSP
Sbjct: 1729 YSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1788

Query: 425  SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            +SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1789 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP YS
Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801

Query: 428  PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
            PSSPQ SPS     TG                YSPS   YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
            SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+      S TSP       
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832

Query: 437  -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
                    YSP+SP ++P+   YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459
            F+P S  YSP++  YSPTSP YSPTS  PS                 YSPSS  YSP+SP
Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
              S TSP YSPSSP +SP S  YSP+ P YSP+S + YTP T
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1726

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
            +SPS S YSPTSP YSPTS     PS              YSP+S +YSP+SP+YSP+SP
Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              S +SP YSP+SP +SP S  YSP+ P Y+P +T  Y+P + +    P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1740

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+SP +SP+  
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            ++SP+SP YSP SPSY  SP SP Y+P SP YSP+SP YSP+SP  S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813

Query: 410  SP--------STGYSPSQPGYSPSSTSQYTP 342
            SP        S  YSP+   YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F 
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885

Query: 407  PS 402
             S
Sbjct: 1886 ES 1887

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
            FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSP 1577

Query: 437  DYSPSSPQFSPST------GYSPSQPGYSPSS 360
             YSP+SP ++ S+       YSPS P YSP+S
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609

[140][TOP]
>UniRef100_C6F1E9 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
           RepID=C6F1E9_PLAVI
          Length = 225

 Score =  105 bits (263), Expect = 2e-21
 Identities = 51/75 (68%), Positives = 60/75 (80%), Gaps = 3/75 (4%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP
Sbjct: 62  KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSP 121

Query: 404 STGY--SPSQPGYSP 366
           S+    +PS P YSP
Sbjct: 122 SSPVPNNPSSPHYSP 136

 Score =  102 bits (253), Expect = 3e-20
 Identities = 51/81 (62%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP 
Sbjct: 56  YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 115

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSPS P  +  S+  Y+P
Sbjct: 116 SPQYSPSSPVPNNPSSPHYSP 136

 Score =  101 bits (252), Expect = 4e-20
 Identities = 50/79 (63%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
           S  YS TSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 53  SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112

Query: 392 SPSQPGYSPSSTSQYTPKT 336
           SP+ P YSPSS     P +
Sbjct: 113 SPTSPQYSPSSPVPNNPSS 131

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 51/96 (53%), Positives = 63/96 (65%), Gaps = 15/96 (15%)
 Frame = -2

Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
           +SP+SP              +S  SP YS TSP YSPTSP YSP+SP YSP+SP  S TS
Sbjct: 29  YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 88

Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
           P YSP+SP++SP S  YSP+ P YSP+S  QY+P +
Sbjct: 89  PKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSPSS 123

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
           ++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP   P++P    +SP YSP   +SP+
Sbjct: 90  KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 143

Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
           FSP S  YS S P Y  S  ++
Sbjct: 144 FSPTSPAYSISSPVYDQSGNAR 165

[141][TOP]
>UniRef100_C6F0A2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
           RepID=C6F0A2_PLAFA
          Length = 223

 Score =  105 bits (263), Expect = 2e-21
 Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP 
Sbjct: 40  YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 99

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P YSP+S  +Y+P
Sbjct: 100 SPKYSPTSPKYSPTS-PKYSP 119

 Score =  100 bits (250), Expect = 6e-20
 Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
           S  YS TSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 37  SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 96

Query: 392 SPSQPGYSPSSTSQYTP 342
           SP+ P YSP+S  +Y+P
Sbjct: 97  SPTSPKYSPTS-PKYSP 112

 Score =  100 bits (249), Expect = 8e-20
 Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP
Sbjct: 60  KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 119

Query: 404 ST--GYSPSQPGYSPSS 360
           ++    + + P YSP S
Sbjct: 120 TSPVAQNIASPNYSPYS 136

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
           +S Y+  SP YS TSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 30  NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89

Query: 392 SPSQPGYSPSSTSQYTP 342
           SP+ P YSP+S  +Y+P
Sbjct: 90  SPTSPKYSPTS-PKYSP 105

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 50/89 (56%), Positives = 62/89 (69%), Gaps = 9/89 (10%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSP 426
           ++SP+SP YSPTSP YSPTSP YSPTSP YS       P+SP YSP+SP  S TSP YSP
Sbjct: 46  KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 105

Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           +SP++SP S  YSP+ P     ++  Y+P
Sbjct: 106 TSPKYSPTSPKYSPTSPVAQNIASPNYSP 134

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438
           ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP            YS +SP  S TSP
Sbjct: 88  KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 147

Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330
            YS SSP +  S     + P  P Y   S  Q      D
Sbjct: 148 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 186

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 12/85 (14%)
 Frame = -2

Query: 560 YSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
           YSPTSP+Y+  +  YSPTSP            Y+  SP YS +SP  S TSP YSP+SP+
Sbjct: 1   YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60

Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342
           +SP S  YSP+ P YSP+S  +Y+P
Sbjct: 61  YSPTSPKYSPTSPKYSPTS-PKYSP 84

[142][TOP]
>UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
            RepID=B4PY98_DROYA
          Length = 1889

 Score =  105 bits (263), Expect = 2e-21
 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776

 Score =  104 bits (259), Expect = 6e-21
 Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP  S TSP YSP+SP ++P T
Sbjct: 1667 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S    Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 7/88 (7%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  +  SP Y+ ++P 
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPN 1625

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
            F+P STGYSPS  GYSP+S   Y+P  N
Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTPN 1652

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
            +SP+SP YSPTSP+Y+P +PSYSPTSP+YS                    P+SPTYSP S
Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767

Query: 461  PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            P   G+         SP YSP+SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801

Query: 428  PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
            PSSPQ SPS     TG                YSPS   YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
            SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+      S TSP       
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832

Query: 437  -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
                    YSP+SP ++P+   YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+SP +SP+  
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459
            +SPSS  YSPTSP YSPT     SPS              YSP+S +YSP+SP+YSP+SP
Sbjct: 1633 YSPSSSGYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 1692

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              S +SP YSP+SP +SP S  YSP+ P Y+P  T  Y+P + +    P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1740

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            ++SP+SP YSP SPSY  SP SP Y+P SP YSP+SP YSP+SP  S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813

Query: 410  SP--------STGYSPSQPGYSPSSTSQYTP 342
            SP        S  YSP+   YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 56/149 (37%), Positives = 66/149 (44%), Gaps = 68/149 (45%)
 Frame = -2

Query: 578  FSPSSP-------------YSPTSPSYSPTSP---------------------------- 522
            +SP+SP             YSP+SP+YSPTSP                            
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSS 1638

Query: 521  SYSPTSP--------------------------SYSPSSPTYSPSSPYNSGTSPDYSPSS 420
             YSPTSP                          +YSPSS  YSP+SP  S TSP YSPSS
Sbjct: 1639 GYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSS 1698

Query: 419  PQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
            P +SP S  YSP+ P YSP+S + YTP T
Sbjct: 1699 PSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F 
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885

Query: 407  PS 402
             S
Sbjct: 1886 ES 1887

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
            FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577

Query: 437  DYSPSSPQFSPST------GYSPSQPGYSPSS 360
             YSP+SP ++ S+       YSPS P YSP+S
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609

[143][TOP]
>UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
            RepID=B4H2R8_DROPE
          Length = 1804

 Score =  105 bits (263), Expect = 2e-21
 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1614 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1673

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1674 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1710

 Score =  105 bits (262), Expect = 3e-21
 Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP  S TSP YSP+SP ++P+T
Sbjct: 1601 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1660

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S    Y+P
Sbjct: 1661 PSYSPTSPNYSAS--PHYSP 1678

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 18/97 (18%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-- 408
            +SPSSP YSPTSP YSPTSPSYSPTSP+Y+P++P+YSP+SP N   SP YSP+SP +S  
Sbjct: 1628 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQT 1686

Query: 407  -------------PSTGY--SPSQPGYSPSSTSQYTP 342
                         PS  Y  SP  P Y+P S  QY+P
Sbjct: 1687 GAKYSPTSPTYSPPSPSYDGSPGSPQYTPGS-PQYSP 1722

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426
            +SP+SP       YSP SP+YS T   YSPTSP+YSP SP+Y  SP SP  +  SP YSP
Sbjct: 1663 YSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1722

Query: 425  SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            +SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1723 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1749

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459
            F+P S  YSP++  YSPTSP YSPTS  PS                 YSPSS  YSP+SP
Sbjct: 1560 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1619

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
              S TSP YSPSSP +SP S  YSP+ P YSP+S + YTP T
Sbjct: 1620 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1660

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
            +SPS S YSPTSP YSPTS     PS              YSP+S +YSP+SP+YSP+SP
Sbjct: 1567 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1626

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              S +SP YSP+SP +SP S  YSP+ P Y+P +T  Y+P + +    P
Sbjct: 1627 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1674

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            ++SP+SP YSP SPSY  SP SP Y+P SP YSP+SP YSP+SP  S +SP +SPS+ Q+
Sbjct: 1689 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1747

Query: 410  SP--------STGYSPSQPGYSPSSTSQYTP 342
            SP        S  YSP+   YSPSST +Y+P
Sbjct: 1748 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1777

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQ 414
            SPS   SP SP Y+P SP YSP SP YSP+SP YSPSSP +      S T   YS +SP+
Sbjct: 1701 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1760

Query: 413  FSPSTG-YSPSQPGYSPSSTSQYTP 342
            +SP+   YSPS   YSP+S + YTP
Sbjct: 1761 YSPNMSIYSPSSTKYSPTSPT-YTP 1784

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 8/89 (8%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS---- 408
            S + P +P SPSYSPTSP+Y+ +SP    +SP YSPSSP  S TSP Y+ +SP+++    
Sbjct: 1501 SMTPPMTPVSPSYSPTSPNYTASSPG--GASPNYSPSSPNYSPTSPLYAAASPRYASTTP 1558

Query: 407  ----PSTGYSPSQPGYSPSSTSQYTPKTN 333
                 STGYSPS  GYSP+S   Y+P +N
Sbjct: 1559 NFNPQSTGYSPSASGYSPTS-PVYSPTSN 1586

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSP+SP +SP S  YSP+  TYS +SP  S     YSPSS ++SP
Sbjct: 1719 QYSPASPKYSPTSPLYSPSSPQHSP-SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSP 1777

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  Y+P+   YSP+S   Y+P
Sbjct: 1778 TSPTYTPTARNYSPTSL-MYSP 1798

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 32/58 (55%), Positives = 41/58 (70%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+S  +SP+
Sbjct: 1742 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSLMYSPT 1799

[144][TOP]
>UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
            RepID=B3NUC1_DROER
          Length = 1889

 Score =  105 bits (263), Expect = 2e-21
 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP++ YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP  S TSP YSP+SP ++P T
Sbjct: 1667 YSPANAYSPSSANYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S    Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
            +SP+SP YSPTSP+Y+P +PSYSPTSP+YS                    P+SPTYSP S
Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767

Query: 461  PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            P   G+         SP YSP+SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801

Query: 428  PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
            PSSPQ SPS     TG                YSPS   YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 7/79 (8%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  +  SP Y+ ++P 
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPN 1625

Query: 413  FSP-STGYSPSQPGYSPSS 360
            F+P STGYSPS  GYSP+S
Sbjct: 1626 FNPQSTGYSPSSSGYSPTS 1644

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
            SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+      S TSP       
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832

Query: 437  -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
                    YSP+SP ++P+   YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+SP +SP+  
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459
            +SPSS  YSPTSP YSPT     SPS              YSP+S +YSP+SP+YSP+SP
Sbjct: 1633 YSPSSSGYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPANAYSPSSANYSPNSPSYSPTSP 1692

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              S +SP YSP+SP +SP S  YSP+ P Y+P  T  Y+P + +    P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1740

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            ++SP+SP YSP SPSY  SP SP Y+P SP YSP+SP YSP+SP  S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813

Query: 410  SP--------STGYSPSQPGYSPSSTSQYTP 342
            SP        S  YSP+   YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 56/149 (37%), Positives = 66/149 (44%), Gaps = 68/149 (45%)
 Frame = -2

Query: 578  FSPSSP-------------YSPTSPSYSPTSP---------------------------- 522
            +SP+SP             YSP+SP+YSPTSP                            
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSS 1638

Query: 521  SYSPTSP--------------------------SYSPSSPTYSPSSPYNSGTSPDYSPSS 420
             YSPTSP                          +YSPSS  YSP+SP  S TSP YSPSS
Sbjct: 1639 GYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPANAYSPSSANYSPNSPSYSPTSPSYSPSS 1698

Query: 419  PQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
            P +SP S  YSP+ P YSP+S + YTP T
Sbjct: 1699 PSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F 
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885

Query: 407  PS 402
             S
Sbjct: 1886 ES 1887

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
            FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577

Query: 437  DYSPSSPQFSPST------GYSPSQPGYSPSS 360
             YSP+SP ++ S+       YSPS P YSP+S
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609

[145][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
            RepID=B3MQ29_DROAN
          Length = 1889

 Score =  105 bits (263), Expect = 2e-21
 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776

 Score =  104 bits (259), Expect = 6e-21
 Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP  S TSP YSP+SP ++P T
Sbjct: 1667 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S    Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 50/88 (56%), Positives = 64/88 (72%), Gaps = 7/88 (7%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  + TSP Y+ ++P 
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYATTSPRYASTTPN 1625

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
            F+P STGYSPS  GYSP+S   Y+P +N
Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTSN 1652

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
            +SP+SP YSPTSP+Y+P +PSYSPTSP+YS                    P+SPTYSP S
Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767

Query: 461  PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            P   G+         SP YSP+SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801

Query: 428  PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
            PSSPQ SPS     TG                YSPS   YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 55/102 (53%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTS-----PS--------------YSPSSPTYSPSSP 459
            F+P S  YSP+S  YSPTSP YSPTS     PS              YSPSS  YSP+SP
Sbjct: 1626 FNPQSTGYSPSSSGYSPTSPVYSPTSNYQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSP 1685

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
              S TSP YSPSSP +SP S  YSP+ P YSP+S + YTP T
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
            SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+      S TSP       
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832

Query: 437  -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
                    YSP+SP ++P+   YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+SP +SP+  
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            ++SP+SP YSP SPSY  SP SP Y+P SP YSP+SP YSP+SP  S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813

Query: 410  SP--------STGYSPSQPGYSPSSTSQYTP 342
            SP        S  YSP+   YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 49/93 (52%), Positives = 58/93 (62%), Gaps = 14/93 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP-----SSP 417
            +SPSSP YSPTSP Y+ TSP Y+ T+P+++P S  YSPSS   S TSP YSP     SSP
Sbjct: 1598 YSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQSSP 1657

Query: 416  QF--------SPSTGYSPSQPGYSPSSTSQYTP 342
             F        SP   YSPS   YSP+S S Y+P
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSSNYSPNSPS-YSP 1689

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 13/92 (14%)
 Frame = -2

Query: 578  FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438
            +SP+SP             YSP+SP+YSPTSP Y+ TSP Y+ ++P ++P S   S +S 
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSS 1638

Query: 437  DYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
             YSP+SP +SP++ Y  S P ++ S ++ Y+P
Sbjct: 1639 GYSPTSPVYSPTSNYQ-SSPSFAGSGSNMYSP 1669

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F 
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885

Query: 407  PS 402
             S
Sbjct: 1886 ES 1887

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
            FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577

Query: 437  DYSPSSPQFSPST------GYSPSQPGYSPSS 360
             YSP+SP ++ S+       YSPS P YSP+S
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609

[146][TOP]
>UniRef100_Q84KP6 DNA-directed RNA polymerase n=1 Tax=Cyanidioschyzon merolae
            RepID=Q84KP6_CYAME
          Length = 1819

 Score =  105 bits (261), Expect = 3e-21
 Identities = 55/89 (61%), Positives = 68/89 (76%), Gaps = 8/89 (8%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +SP+SP   SPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP  S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1695

Query: 404  ST---GYSPSQP--GYSPSSTS-QYTPKT 336
            S+    YSPS P   YSPSS +  Y+P +
Sbjct: 1696 SSPNVAYSPSSPNVAYSPSSPNVAYSPSS 1724

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 10/90 (11%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSY--------SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
            SP+   + T  ++SP+SP+Y        SPTSP+YSP+SP YSP+SP  S TSP YSP+S
Sbjct: 1617 SPAGGGTGTLGAFSPSSPAYSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1676

Query: 419  PQFSP-STGYSPSQPGYSPSSTS-QYTPKT 336
            P +SP S  YSP+ P YSPSS +  Y+P +
Sbjct: 1677 PAYSPTSPAYSPTSPAYSPSSPNVAYSPSS 1706

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 56/102 (54%), Positives = 66/102 (64%), Gaps = 21/102 (20%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPD---- 435
            +SP+SP YSPTSP+YSPTSP+YSPTSP+YS       P+SP YSPSSP N   SP     
Sbjct: 1651 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSP-NVAYSPSSPNV 1709

Query: 434  -YSPSSPQF-----SPSTGYSPSQP--GYSPSSTS-QYTPKT 336
             YSPSSP       SP+  YSPS P   YSPSS +  Y+P +
Sbjct: 1710 AYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSS 1751

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 56/116 (48%), Positives = 65/116 (56%), Gaps = 35/116 (30%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPS--------------------YSPSSP--TYSP 468
            +SP+SP YSPTSP+YSPTSP+YSP+SP+                    YSPSSP   YSP
Sbjct: 1672 YSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSP 1731

Query: 467  SSPYNSGTSPD-----YSPSSPQF-----SPSTGYSPSQP--GYSPSSTSQYTPKT 336
            SSP N   SP      YSPSSP       SP+  YSPS P   YSPSS   Y+P +
Sbjct: 1732 SSP-NVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSS 1786

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 56/107 (52%), Positives = 68/107 (63%), Gaps = 27/107 (25%)
 Frame = -2

Query: 578  FSPSSP---YSPTSPS--YSPTSPS--YSPTSPS--YSPSSPT--YSPSSPY--NSGTSP 438
            +SPSSP   YSP+SP+  YSP+SP+  YSP+SP+  YSPSSP   YSPSSP    S +SP
Sbjct: 1711 YSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSP 1770

Query: 437  D--YSPSSP----QFSPSTGYSPSQP--GYSPS------STSQYTPK 339
            +  YSPSSP      SP+  YSPS P   YSPS      S+  Y+PK
Sbjct: 1771 NVAYSPSSPVAYSPSSPNVAYSPSSPNVAYSPSSPAFSPSSPVYSPK 1817

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 49/87 (56%), Positives = 60/87 (68%), Gaps = 14/87 (16%)
 Frame = -2

Query: 578  FSPSSP---YSPTSPS--YSPTSPS--YSPTSPS--YSPSSPT-YSPSSPY--NSGTSPD 435
            +SPSSP   YSP+SP+  YSP+SP+  YSP+SP+  YSPSSP  YSPSSP    S +SP+
Sbjct: 1738 YSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSSPNVAYSPSSPN 1797

Query: 434  --YSPSSPQFSPSTGYSPSQPGYSPSS 360
              YSPSSP FSPS+      P YSP +
Sbjct: 1798 VAYSPSSPAFSPSS------PVYSPKN 1818

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            +SP++  S S S T+P+++P        T  ++SPSSP YSP+SP         SP+SP 
Sbjct: 1599 TSPFA--SFSASATTPNWAPSPAGGGTGTLGAFSPSSPAYSPTSPRL------VSPTSPA 1650

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP S  YSP+ P YSP+S + Y+P
Sbjct: 1651 YSPTSPAYSPTSPAYSPTSPA-YSP 1674

[147][TOP]
>UniRef100_C6HNU4 DNA-directed RNA polymerase II n=1 Tax=Ajellomyces capsulatus H143
           RepID=C6HNU4_AJECH
          Length = 668

 Score =  105 bits (261), Expect = 3e-21
 Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 12/99 (12%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SPS   SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP  S TSP YSP+SP    STG
Sbjct: 545 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 604

Query: 395 ------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                       Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 605 RHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 643

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 49/96 (51%), Positives = 66/96 (68%), Gaps = 16/96 (16%)
 Frame = -2

Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSG 447
           R+SPSS YSPTSP              +SP SP+++PTSP+YSP+SP+Y  SP+SP  S 
Sbjct: 500 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSP 559

Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           TSP +SP+SP +SP S  +SP+ P +SP+S S Y+P
Sbjct: 560 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 594

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
           FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP                   Y+P+SP 
Sbjct: 564 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPG 623

Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
            S TSP+ YSP+SP F  SP++   P+ PGYSP+S
Sbjct: 624 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 658

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 36/112 (32%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPD 435
           +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP             S TSP 
Sbjct: 557 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK 616

Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351
           Y+P+SP +SP                        S GYSP+ P ++P S  Q
Sbjct: 617 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 668

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
 Frame = -2

Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           FSP    SP    YSP+SP + SPTSP YSPSS  YSP+SP  S TSP +  SSP FSP 
Sbjct: 474 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 530

Query: 404 STGYSPSQPGYSPSSTSQYTPKTN 333
           S  ++P+ P YSP+S S     T+
Sbjct: 531 SPAFAPTSPAYSPTSPSYQQSPTS 554

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 10/51 (19%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSP 459
           +++P+SP +SPTSP +YSPTSP++S        PTSP YSP+SPT++P SP
Sbjct: 616 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISP 666

[148][TOP]
>UniRef100_C1GHL1 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
            Pb18 RepID=C1GHL1_PARBD
          Length = 1746

 Score =  105 bits (261), Expect = 3e-21
 Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
 Frame = -2

Query: 578  FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP    SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP  S TSP YSP+SP   
Sbjct: 1620 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1679

Query: 407  PSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
             STG            Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1680 GSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1722

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 23/97 (23%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSY---------SPSSPTYSP 468
            R+SPSS YSPTSP              +SP SP ++PTSP+Y         SP+SP+YSP
Sbjct: 1579 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSP 1638

Query: 467  SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
            +SP  S TSP YSP+SP FSP S  +SP+ P YSP+S
Sbjct: 1639 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1675

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
            FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP                   Y+P+SP 
Sbjct: 1643 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPG 1702

Query: 455  NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
             S TSP+ YSP+SP F  SP++   P+ PGYSP+S
Sbjct: 1703 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1737

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 49/109 (44%), Positives = 64/109 (58%), Gaps = 36/109 (33%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435
            +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP   G           TSP 
Sbjct: 1636 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPK 1695

Query: 434  YSPSSPQFSP------------------------STGYSPSQPGYSPSS 360
            Y+P+SP +SP                        S GYSP+ P +SP+S
Sbjct: 1696 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTS 1744

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 51/90 (56%), Positives = 62/90 (68%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSPY--SPTSPSYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGTSPDYSPS 423
            +SPSSP+  SPTSP YSP+S  YSPTSP  S       SSP +SP+SP  + TSP YSP+
Sbjct: 1565 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPT 1623

Query: 422  SP--QFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP  Q SP S  YSP+ PG+SP+S S Y+P
Sbjct: 1624 SPGYQQSPTSPSYSPTSPGFSPTSPS-YSP 1652

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 34/59 (57%), Positives = 42/59 (71%), Gaps = 9/59 (15%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYS--------PSSPYNSGTSPDYSPSSP 417
            SP SPTSP Y+PTSP +SPTSP +YSP+SP +S        P+SP  S TSP +SP+SP
Sbjct: 1687 SPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTSP 1745

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            FSP    SP    YSP+SP + SPTSP YSPSS  YSP+SP  S TSP +  SSP FSP+
Sbjct: 1553 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1609

Query: 401  TG-YSPSQPGYSPSS 360
            +  ++P+ P YSP+S
Sbjct: 1610 SPVFAPTSPAYSPTS 1624

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 10/56 (17%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSP-SYSPTSPSYS--------PSSPTYSPSSPYNSGTSP 438
            SP+SP Y+PTSP +SPTSP +YSPTSP++S        P+SP YSP+SP  S TSP
Sbjct: 1690 SPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTSP 1745

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 29/52 (55%), Positives = 41/52 (78%), Gaps = 10/52 (19%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSPY 456
            +++P+SP +SPTSP +YSPTSP++S        PTSP YSP+SPT+SP+SP+
Sbjct: 1695 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTSPH 1746

[149][TOP]
>UniRef100_C0SE75 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
            Pb03 RepID=C0SE75_PARBP
          Length = 2106

 Score =  105 bits (261), Expect = 3e-21
 Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
 Frame = -2

Query: 578  FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP    SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP  S TSP YSP+SP   
Sbjct: 1620 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1679

Query: 407  PSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
             STG            Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1680 GSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1722

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 23/97 (23%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSY---------SPSSPTYSP 468
            R+SPSS YSPTSP              +SP SP ++PTSP+Y         SP+SP+YSP
Sbjct: 1579 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSP 1638

Query: 467  SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
            +SP  S TSP YSP+SP FSP S  +SP+ P YSP+S
Sbjct: 1639 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1675

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
            FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP                   Y+P+SP 
Sbjct: 1643 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPG 1702

Query: 455  NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
             S TSP+ YSP+SP F  SP++   P+ PGYSP+S
Sbjct: 1703 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1737

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 36/108 (33%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435
            +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP   G           TSP 
Sbjct: 1636 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPK 1695

Query: 434  YSPSSPQFSP------------------------STGYSPSQPGYSPS 363
            Y+P+SP +SP                        S GYSP+ P +SP+
Sbjct: 1696 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPT 1743

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 51/90 (56%), Positives = 62/90 (68%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSPY--SPTSPSYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGTSPDYSPS 423
            +SPSSP+  SPTSP YSP+S  YSPTSP  S       SSP +SP+SP  + TSP YSP+
Sbjct: 1565 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPT 1623

Query: 422  SP--QFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP  Q SP S  YSP+ PG+SP+S S Y+P
Sbjct: 1624 SPGYQQSPTSPSYSPTSPGFSPTSPS-YSP 1652

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            FSP    SP    YSP+SP + SPTSP YSPSS  YSP+SP  S TSP +  SSP FSP+
Sbjct: 1553 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1609

Query: 401  TG-YSPSQPGYSPSS 360
            +  ++P+ P YSP+S
Sbjct: 1610 SPVFAPTSPAYSPTS 1624

[150][TOP]
>UniRef100_C0NEY2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
            RepID=C0NEY2_AJECG
          Length = 1234

 Score =  105 bits (261), Expect = 3e-21
 Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 12/99 (12%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
            SPS   SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP  S TSP YSP+SP    STG
Sbjct: 1111 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 1170

Query: 395  ------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                        Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1171 RHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1209

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 49/96 (51%), Positives = 66/96 (68%), Gaps = 16/96 (16%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSG 447
            R+SPSS YSPTSP              +SP SP+++PTSP+YSP+SP+Y  SP+SP  S 
Sbjct: 1066 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSP 1125

Query: 446  TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            TSP +SP+SP +SP S  +SP+ P +SP+S S Y+P
Sbjct: 1126 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 1160

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
            FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP                   Y+P+SP 
Sbjct: 1130 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPG 1189

Query: 455  NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
             S TSP+ YSP+SP F  SP++   P+ PGYSP+S
Sbjct: 1190 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1224

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 36/112 (32%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPD 435
            +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP             S TSP 
Sbjct: 1123 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK 1182

Query: 434  YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351
            Y+P+SP +SP                        S GYSP+ P ++P S  Q
Sbjct: 1183 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 1234

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSP    SP    YSP+SP + SPTSP YSPSS  YSP+SP  S TSP +  SSP FSP 
Sbjct: 1040 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1096

Query: 404  STGYSPSQPGYSPSSTSQYTPKTN 333
            S  ++P+ P YSP+S S     T+
Sbjct: 1097 SPAFAPTSPAYSPTSPSYQQSPTS 1120

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 10/51 (19%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSP 459
            +++P+SP +SPTSP +YSPTSP++S        PTSP YSP+SPT++P SP
Sbjct: 1182 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISP 1232

[151][TOP]
>UniRef100_A6QYA7 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
            RepID=A6QYA7_AJECN
          Length = 1747

 Score =  105 bits (261), Expect = 3e-21
 Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 12/99 (12%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
            SPS   SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP  S TSP YSP+SP    STG
Sbjct: 1624 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 1683

Query: 395  ------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                        Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1684 RHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1722

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 49/96 (51%), Positives = 66/96 (68%), Gaps = 16/96 (16%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSG 447
            R+SPSS YSPTSP              +SP SP+++PTSP+YSP+SP+Y  SP+SP  S 
Sbjct: 1579 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSP 1638

Query: 446  TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            TSP +SP+SP +SP S  +SP+ P +SP+S S Y+P
Sbjct: 1639 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 1673

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
            FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP                   Y+P+SP 
Sbjct: 1643 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPG 1702

Query: 455  NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
             S TSP+ YSP+SP F  SP++   P+ PGYSP+S
Sbjct: 1703 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1737

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 36/112 (32%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPD 435
            +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP             S TSP 
Sbjct: 1636 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK 1695

Query: 434  YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351
            Y+P+SP +SP                        S GYSP+ P ++P S  Q
Sbjct: 1696 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 1747

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSP    SP    YSP+SP + SPTSP YSPSS  YSP+SP  S TSP +  SSP FSP 
Sbjct: 1553 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1609

Query: 404  STGYSPSQPGYSPSSTSQYTPKTN 333
            S  ++P+ P YSP+S S     T+
Sbjct: 1610 SPAFAPTSPAYSPTSPSYQQSPTS 1633

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 10/51 (19%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSP 459
            +++P+SP +SPTSP +YSPTSP++S        PTSP YSP+SPT++P SP
Sbjct: 1695 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISP 1745

[152][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
            RepID=B4NDK9_DROWI
          Length = 1890

 Score =  104 bits (260), Expect = 4e-21
 Identities = 50/97 (51%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            ++P+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1681 YTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1740

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1741 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1777

 Score =  103 bits (256), Expect = 1e-20
 Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +Y+P SPSYSPTSPSYSPSSP+YSP+SP  S TSP YSP+SP ++P T
Sbjct: 1668 YSPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1727

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S    Y+P
Sbjct: 1728 PSYSPTSPNYSAS--PHYSP 1745

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
            +SP+SP YSPTSP+Y+P +PSYSPTSP+YS                    P+SPTYSP S
Sbjct: 1709 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1768

Query: 461  PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            P   G+         SP YSP+SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1769 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1816

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP YS
Sbjct: 1743 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1802

Query: 428  PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
            PSSPQ SPS     TG                YSPS   YSP+S + YTP
Sbjct: 1803 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1851

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
            SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+      S TSP       
Sbjct: 1774 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1833

Query: 437  -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
                    YSP+SP ++P+   YSP+ P YSP++ S Y+P
Sbjct: 1834 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1873

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+SP +SP+  
Sbjct: 1809 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1868

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1869 SHYSPTSPAYSPSS 1882

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            ++SP+SP YSP SPSY  SP SP Y+P SP YSP+SP YSP+SP  S +SP +SPS+ Q+
Sbjct: 1756 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1814

Query: 410  SP--------STGYSPSQPGYSPSSTSQYTP 342
            SP        S  YSP+   YSPSST +Y+P
Sbjct: 1815 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1844

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 14/92 (15%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPT-------------SPSYSPSSPTYSPSSPYNSGTSPDYSP 426
            SPY PTSPS    SPSYSPT             SP+YSPSSP YSP+SP  + TSP Y+ 
Sbjct: 1566 SPYFPTSPS---VSPSYSPTSPNYTASSPSGGASPNYSPSSPNYSPTSPLYAATSPRYAS 1622

Query: 425  SSPQFS-PSTGYSPSQPGYSPSSTSQYTPKTN 333
            ++P F+  STGYSPS  GYSP+S   Y+P +N
Sbjct: 1623 TTPNFNLQSTGYSPSSSGYSPTS-PVYSPTSN 1653

 Score = 85.1 bits (209), Expect = 4e-15
 Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
            +SPSS  YSPTSP YSPTS     PS              YSP+S +Y+P+SP+YSP+SP
Sbjct: 1634 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSP 1693

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              S +SP YSP+SP +SP S  YSP+ P Y+P  T  Y+P + +    P
Sbjct: 1694 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1741

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 10/98 (10%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            S S  YSPTSP+Y+ +SPS      YSP+SP+YSP+SP Y+ +SP  + T+P+++  S  
Sbjct: 1574 SVSPSYSPTSPNYTASSPSGGASPNYSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTG 1633

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTPK---TNDNKDDPG 312
            +SP S+GYSP+ P YSP+S  Q +P    +  N   PG
Sbjct: 1634 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPG 1671

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F 
Sbjct: 1827 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1886

Query: 407  PS 402
             S
Sbjct: 1887 ES 1888

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 52/133 (39%), Positives = 61/133 (45%), Gaps = 55/133 (41%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSP----------------------------SYSPTSP--------- 501
            S  YSP+SP+YSPTSP                             YSPTSP         
Sbjct: 1596 SPNYSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSSSGYSPTSPVYSPTSNFQ 1655

Query: 500  -----------------SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 375
                             +YSPSS  Y+P+SP  S TSP YSPSSP +SP S  YSP+ P 
Sbjct: 1656 SSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPS 1715

Query: 374  YSPSSTSQYTPKT 336
            YSP+S + YTP T
Sbjct: 1716 YSPTSPN-YTPVT 1727

[153][TOP]
>UniRef100_C5GKA7 DNA-directed RNA polymerase n=2 Tax=Ajellomyces dermatitidis
            RepID=C5GKA7_AJEDR
          Length = 1746

 Score =  104 bits (260), Expect = 4e-21
 Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
 Frame = -2

Query: 578  FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP    SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP  S TSP YSP+SP   
Sbjct: 1619 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1678

Query: 407  PSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
             STG            Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1679 ISTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1721

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 49/97 (50%), Positives = 62/97 (63%), Gaps = 23/97 (23%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSY---------SPSSPTYSP 468
            R+SPSS YSPTSP              +SP SP+++PTSP+Y         SP+SP+YSP
Sbjct: 1578 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPGYQQSPTSPSYSP 1637

Query: 467  SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
            +SP  S TSP YSP+SP FSP S  +SP+ P YSP+S
Sbjct: 1638 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1674

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
            FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP                   Y+P+SP 
Sbjct: 1642 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGISTGRHLSPTSPTSPKYTPTSPG 1701

Query: 455  NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
             S TSP+ YSP+SP F  SP++   P+ PGYSP+S
Sbjct: 1702 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1736

 Score = 87.8 bits (216), Expect = 6e-16
 Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 36/112 (32%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPD 435
            +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP             S TSP 
Sbjct: 1635 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGISTGRHLSPTSPTSPK 1694

Query: 434  YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351
            Y+P+SP +SP                        S GYSP+ P ++P+S  Q
Sbjct: 1695 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1746

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578  FSPSSPY--SPTSPSYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP+  SPTSP YSP+S  YSPTSP  S       SSP +SP+SP  + TSP YSP+
Sbjct: 1564 YSPTSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPT 1622

Query: 422  SP--QFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP  Q SP S  YSP+ PG+SP+S S Y+P
Sbjct: 1623 SPGYQQSPTSPSYSPTSPGFSPTSPS-YSP 1651

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSP    SP    YSPTSP + SPTSP YSPSS  YSP+SP  S TSP +  SSP FSP 
Sbjct: 1552 FSPHGARSPGG-GYSPTSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1608

Query: 404  STGYSPSQPGYSPSS 360
            S  ++P+ P YSP+S
Sbjct: 1609 SPAFAPTSPAYSPTS 1623

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 28/51 (54%), Positives = 40/51 (78%), Gaps = 10/51 (19%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSP 459
            +++P+SP +SPTSP +YSPTSP++S        PTSP YSP+SPT++P+SP
Sbjct: 1694 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPTSP 1744

[154][TOP]
>UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
            RepID=B4JXA6_DROGR
          Length = 1889

 Score =  104 bits (259), Expect = 6e-21
 Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSP SPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSAS 1739

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +YSP SPSYSP SPSYSPSSP+YSP+SP  S TSP YSP+SP+++  T
Sbjct: 1667 YSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVT 1726

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S    Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  + TSP Y+ ++P 
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSPRYASATPN 1625

Query: 413  F-SPSTGYSPSQPGYSPSSTSQYTPKTN 333
            F + STGYSPS  GYSP+S   Y+P +N
Sbjct: 1626 FNAQSTGYSPSSSGYSPTS-PVYSPTSN 1652

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801

Query: 428  PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
            PSSPQ SPS     TG                YSPS   YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426
            +SP+SP       YSP SP+YS T   YSPTSP+YSP SP+Y  SP SP  +  SP YSP
Sbjct: 1729 YSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1788

Query: 425  SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            +SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1789 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 51/103 (49%), Positives = 61/103 (59%), Gaps = 24/103 (23%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--------------- 447
            +SPSSP YSPTSP YSPTSPSYSPTSP Y+  +P+YSP+SP  S                
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSASPHYSPASPAYSQTG 1753

Query: 446  -----TSPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTP 342
                 TSP YSP SP +  S G   Y+P  P YSP+S  +Y+P
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPAS-PKYSP 1795

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
            SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+      S TSP       
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832

Query: 437  -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
                    YSP+SP ++P+   YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+SP +SP+  
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            ++SP+SP YSP SPSY  SP SP Y+P SP YSP+SP YSP+SP  S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813

Query: 410  SP--------STGYSPSQPGYSPSSTSQYTP 342
            SP        S  YSP+   YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 51/109 (46%), Positives = 65/109 (59%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
            +SPSS  YSPTSP YSPTS     PS              YSP+S +YSP+SP+YSP SP
Sbjct: 1633 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNLYSPGNAYSPSSSNYSPNSPSYSPMSP 1692

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              S +SP YSP+SP +SP S  YSP+ P Y+ + T  Y+P + +    P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPKYT-AVTPSYSPTSPNYSASP 1740

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F 
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885

Query: 407  PS 402
             S
Sbjct: 1886 ES 1887

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 50/112 (44%), Positives = 60/112 (53%), Gaps = 33/112 (29%)
 Frame = -2

Query: 578  FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPT-------YSPSSP 459
            +SP+SP             YSP+SP+YSPTSP Y+ TSP Y+ ++P        YSPSS 
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSS 1638

Query: 458  YNSGTSPDYSP-----SSPQF--------SPSTGYSPSQPGYSPSSTSQYTP 342
              S TSP YSP     SSP F        SP   YSPS   YSP+S S Y+P
Sbjct: 1639 GYSPTSPVYSPTSNFQSSPSFAGSGSNLYSPGNAYSPSSSNYSPNSPS-YSP 1689

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
            FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577

Query: 437  DYSPSSPQFSPST------GYSPSQPGYSPSS 360
             YSP+SP ++ S+       YSPS P YSP+S
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609

[155][TOP]
>UniRef100_C1H3Q4 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
            Pb01 RepID=C1H3Q4_PARBA
          Length = 1748

 Score =  103 bits (258), Expect = 7e-21
 Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
 Frame = -2

Query: 578  FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SP+SP    SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP  S TSP YSP+SP   
Sbjct: 1625 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1684

Query: 407  PSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
             STG            Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1685 GSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1727

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 49/97 (50%), Positives = 62/97 (63%), Gaps = 23/97 (23%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSY---------SPSSPTYSP 468
            R+SPSS YSPTSP              +SP SP ++PTSP+Y         SP+SP+YSP
Sbjct: 1584 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSP 1643

Query: 467  SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
            +SP  S TSP+YSP+SP FSP S  +SP+ P YSP+S
Sbjct: 1644 TSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1680

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
            FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP                   Y+P+SP 
Sbjct: 1648 FSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPG 1707

Query: 455  NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
             S TSP+ YSP+SP F  SP++   P+ PGYSP+S
Sbjct: 1708 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1742

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 18/93 (19%)
 Frame = -2

Query: 578  FSPSSPY--SPTSPSYSPTSPSYSPT-------------SPSYSPSSPTYSPSSPYNSGT 444
            +SPSSP+  SPTSP YSP+S  YSPT             SP +SP+SP ++P+SP  S T
Sbjct: 1570 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPT 1628

Query: 443  SPDY--SPSSPQFSP-STGYSPSQPGYSPSSTS 354
            SP Y  SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1629 SPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPS 1661

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 45/87 (51%), Positives = 54/87 (62%), Gaps = 28/87 (32%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPS------------------YSPTSPSYSPSSP-TYSPSSP 459
            FSP+SP +SPTSPSYSPTSP+                  Y+PTSP +SP+SP TYSP+SP
Sbjct: 1662 FSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSP 1721

Query: 458  YNSG--------TSPDYSPSSPQFSPS 402
              SG        TSP YSP+SP FSP+
Sbjct: 1722 NFSGSPTSPGGPTSPGYSPTSPTFSPT 1748

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            FSP    SP    YSP+SP + SPTSP YSPSS  YSP+SP  S TSP +  SSP FSP+
Sbjct: 1558 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1614

Query: 401  TG-YSPSQPGYSPSS 360
            +  ++P+ P YSP+S
Sbjct: 1615 SPVFAPTSPAYSPTS 1629

[156][TOP]
>UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis
            RepID=UPI00017B0A92
          Length = 1714

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GTSPDYSPS 423
            + P SP  Y+P SP YSPTSPSYSPTSPSYSP+SP+YSP+SP  S       TSP YSP+
Sbjct: 1577 YEPRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPT 1636

Query: 422  SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP +SP S  YSP+ P YSP+S + YTP
Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPTSPN-YTP 1663

 Score =  101 bits (252), Expect = 4e-20
 Identities = 54/99 (54%), Positives = 66/99 (66%), Gaps = 20/99 (20%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-------------------- 459
            +SP+SP  PTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP                    
Sbjct: 1620 YSPTSPSGPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPPHQLVPTSPYTPHISV 1679

Query: 458  YNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
            Y+  TSP YSP+SP+ S    YSP+ PGYSP+S + Y+P
Sbjct: 1680 YSPPTSPTYSPTSPKGST---YSPTSPGYSPTSPT-YSP 1714

 Score =  100 bits (249), Expect = 8e-20
 Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 13/92 (14%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSS 420
            +SP+SP YSPTSPSYSPTSPSYSPTSPS      YSP+SP+YSP+SP  S TSP YSP+S
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1658

Query: 419  PQFS------PSTGYSPSQPGYSPSSTSQYTP 342
            P ++      P++ Y+P    YSP ++  Y+P
Sbjct: 1659 PNYTPPHQLVPTSPYTPHISVYSPPTSPTYSP 1690

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 51/97 (52%), Positives = 62/97 (63%), Gaps = 20/97 (20%)
 Frame = -2

Query: 572  PSSPYSPT-----SPSYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 453
            P+SPY P+     SP+YSPTSP+               YSPTSPSYSP+SP+YSP+SP  
Sbjct: 1554 PASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPSY 1613

Query: 452  SGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP    S  YSP+ P YSP+S S Y+P
Sbjct: 1614 SPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPS-YSP 1649

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 42/87 (48%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
 Frame = -2

Query: 578  FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
            FSPS  S  S  SP YSP   ++SPT  S  P SP   P+SPY        SP+YSP+SP
Sbjct: 1523 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPASPYIPSPGGAMSPNYSPTSP 1575

Query: 416  QFSPST--GYSPSQPGYSPSSTSQYTP 342
             + P +  GY+P  PGYSP+S S Y+P
Sbjct: 1576 AYEPRSPGGYTPQSPGYSPTSPS-YSP 1601

[157][TOP]
>UniRef100_O77165 DNA-directed RNA polymerase (Fragment) n=1 Tax=Breviata anathema
            RepID=O77165_9EUKA
          Length = 1690

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP  S  SP YSP+SP +SP 
Sbjct: 1506 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1565

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1566 SPAYSPASPAYSPASPA-YSP 1585

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP  S  SP YSP+SP +SP 
Sbjct: 1527 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1586

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1587 SPAYSPASPAYSPASPA-YSP 1606

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP  S  SP YSP+SP +SP 
Sbjct: 1548 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1607

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1608 SPAYSPASPAYSPASPA-YSP 1627

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP  S  SP YSP+SP +SP 
Sbjct: 1569 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1628

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1629 SPAYSPASPAYSPASPA-YSP 1648

 Score =  102 bits (253), Expect = 3e-20
 Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP  S  SP YSP+SP +SP 
Sbjct: 1590 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1649

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  Y P+ P YSP+S + Y+P
Sbjct: 1650 SPAYGPASPAYSPASPA-YSP 1669

 Score =  102 bits (253), Expect = 3e-20
 Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP  S  SP YSP+SP + P 
Sbjct: 1597 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPA 1656

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y+P
Sbjct: 1657 SPAYSPASPAYSPASPA-YSP 1676

 Score =  101 bits (251), Expect = 5e-20
 Identities = 49/81 (60%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP  S  SP Y P+SP +SP 
Sbjct: 1604 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPA 1663

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P YSP+S + Y P
Sbjct: 1664 SPAYSPASPAYSPASPA-YDP 1683

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 45/74 (60%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP     SP YSP+SP +SP 
Sbjct: 1611 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPA 1670

Query: 404  STGYSPSQPGYSPS 363
            S  YSP+ P Y P+
Sbjct: 1671 SPAYSPASPAYDPA 1684

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = -2

Query: 563  PYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSP 387
            P SP +  YSP SP+YSP SP+YSP+SP YSP+SP  S  SP YSP+SP +SP S  YSP
Sbjct: 1498 PGSPAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSP 1557

Query: 386  SQPGYSPSSTSQYTP 342
            + P YSP+S + Y+P
Sbjct: 1558 ASPAYSPASPA-YSP 1571

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSP SP+YSP SP+YSP SP+Y P+SP YSP+SP  S  SP YSP+SP + P+
Sbjct: 1625 YSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPA 1684

Query: 401  TGY 393
              Y
Sbjct: 1685 EPY 1687

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
 Frame = -2

Query: 572  PSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            PSSP    Y P   S  P +  YSP SP+YSP+SP YSP+SP  S  SP YSP+SP +SP
Sbjct: 1486 PSSPGPFGYIPVPGS--PAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSP 1543

Query: 404  -STGYSPSQPGYSPSSTSQYTP 342
             S  YSP+ P YSP+S + Y+P
Sbjct: 1544 ASPAYSPASPAYSPASPA-YSP 1564

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 27/43 (62%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN 453
            +SP+SP Y P SP+YSP SP+YSP SP+YSP+SP Y P+ PY+
Sbjct: 1646 YSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPAEPYD 1688

[158][TOP]
>UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
            RepID=B4L732_DROMO
          Length = 1889

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSP SPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776

 Score =  102 bits (253), Expect = 3e-20
 Identities = 49/80 (61%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +YSP SPSYSP SPSYSPSSP+YSP+SP  S TSP YSP+SP ++P T
Sbjct: 1667 YSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S    Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 50/88 (56%), Positives = 64/88 (72%), Gaps = 7/88 (7%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  + TSP Y+ ++P 
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASTSPRYASTTPN 1625

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
            F+P STGYSPS  GYSP+S   Y+P +N
Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTSN 1652

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
            +SP+SP YSPTSP+Y+P +PSYSPTSP+YS                    P+SPTYSP S
Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767

Query: 461  PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            P   G+         SP YSP+SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SP+SP        YSPTSP+YSP SPSY  SP SP Y+P SP YSP+SP  S TSP YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801

Query: 428  PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
            PSSPQ SPS     TG                YSPS   YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
            SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+      S TSP       
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832

Query: 437  -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
                    YSP+SP ++P+   YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+SP +SP+  
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 54/102 (52%), Positives = 61/102 (59%), Gaps = 21/102 (20%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPT-----SPS--------------YSPSSPTYSPSSP 459
            F+P S  YSP+S  YSPTSP YSPT     SPS              YSPSS  YSP+SP
Sbjct: 1626 FNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSP 1685

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
              S  SP YSPSSP +SP S  YSP+ P YSP+S + YTP T
Sbjct: 1686 SYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            ++SP+SP YSP SPSY  SP SP Y+P SP YSP+SP YSP+SP  S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813

Query: 410  SP--------STGYSPSQPGYSPSSTSQYTP 342
            SP        S  YSP+   YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 52/109 (47%), Positives = 65/109 (59%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
            +SPSS  YSPTSP YSPTS     PS              YSP+S +YSP+SP+YSP SP
Sbjct: 1633 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPMSP 1692

Query: 458  YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              S +SP YSP+SP +SP S  YSP+ P Y+P  T  Y+P + +    P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1740

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F 
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885

Query: 407  PS 402
             S
Sbjct: 1886 ES 1887

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 13/92 (14%)
 Frame = -2

Query: 578  FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438
            +SP+SP             YSP+SP+YSPTSP Y+ TSP Y+ ++P ++P S   S +S 
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASTSPRYASTTPNFNPQSTGYSPSSS 1638

Query: 437  DYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
             YSP+SP +SP++ +  S P ++ S ++ Y+P
Sbjct: 1639 GYSPTSPVYSPTSNFQ-SSPSFAGSGSNMYSP 1669

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 41/92 (44%), Positives = 52/92 (56%), Gaps = 19/92 (20%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
            FSPS   S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 1518 FSPSGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577

Query: 437  DYSPSSPQFSPST------GYSPSQPGYSPSS 360
             YSP+SP ++ S+       YSPS P YSP+S
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609

[159][TOP]
>UniRef100_C6F1F2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
           RepID=C6F1F2_9APIC
          Length = 232

 Score =  103 bits (256), Expect = 1e-20
 Identities = 51/83 (61%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +S +SP YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP  S TSP YSP+SP++SP 
Sbjct: 56  YSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 115

Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
           S  YSP+ P YSP+S     P +
Sbjct: 116 SPKYSPTSPQYSPTSPVPNNPSS 138

 Score =  102 bits (254), Expect = 2e-20
 Identities = 49/75 (65%), Positives = 59/75 (78%), Gaps = 3/75 (4%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           ++SP+SP Y PTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP
Sbjct: 69  KYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSP 128

Query: 404 STGY--SPSQPGYSP 366
           ++    +PS P YSP
Sbjct: 129 TSPVPNNPSSPHYSP 143

 Score =  100 bits (248), Expect = 1e-19
 Identities = 50/77 (64%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
           S  YS TSP YSPTSP YSPTSP Y P+SP YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 53  SPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112

Query: 392 SPSQPGYSPSSTSQYTP 342
           SP+ P YSP+S  QY+P
Sbjct: 113 SPTSPKYSPTS-PQYSP 128

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 49/94 (52%), Positives = 61/94 (64%), Gaps = 15/94 (15%)
 Frame = -2

Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
           +SP+SP              +S  SP YS TSP YSPTSP YSP+SP Y P+SP  S TS
Sbjct: 29  YSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTS 88

Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           P YSP+SP++SP S  YSP+ P YSP+S  +Y+P
Sbjct: 89  PKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 121

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
           ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP   P++P    +SP YSP   +SP+
Sbjct: 97  KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPV--PNNP----SSPHYSPYAIASPK 150

Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
           FSP S  YS S P Y  S  ++
Sbjct: 151 FSPTSPAYSISSPVYDQSGNAR 172

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 43/114 (37%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSP------------------SYSPSSPTYSPSSP 459
           ++SP+SP YSPTSP YSPTSP YSPTSP                   +SP+SP YS SSP
Sbjct: 104 KYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSP 163

Query: 458 YNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTPKTNDN-----KDDP 315
               +    + S    SP+    SP Q        S ++P    N      DDP
Sbjct: 164 VYDQSGNARNKSQHPLSPAYILQSPVQVKQHIQDVSVFSPIQQANAEGAQNDDP 217

[160][TOP]
>UniRef100_Q1E2G9 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
            RepID=Q1E2G9_COCIM
          Length = 1750

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 17/105 (16%)
 Frame = -2

Query: 578  FSPSSP-----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            +SP+SP      SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP  S TSP YSP+SP 
Sbjct: 1621 YSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPA 1680

Query: 413  FSPSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
               +TG            Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1681 LGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFAGSP 1725

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            R+  S  +SP SP+++PTSP+YSPTSP Y    SP+SP+YSP+SP  S TSP YSP+SP 
Sbjct: 1600 RYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1659

Query: 413  FSP-STGYSPSQPGYSPSS 360
            FSP S  +SP+ P YSP+S
Sbjct: 1660 FSPASPAFSPTSPSYSPTS 1678

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
            FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP                   Y+P+SP 
Sbjct: 1646 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPG 1705

Query: 455  NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
             S TSP+ YSP+SP F  SP++   P+ PGYSP+S
Sbjct: 1706 WSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTS 1740

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 36/112 (32%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435
            +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP   G           TSP 
Sbjct: 1639 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPK 1698

Query: 434  YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351
            Y+P+SP +SP                        S GYSP+ P ++P+S  Q
Sbjct: 1699 YTPTSPGWSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1750

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 7/86 (8%)
 Frame = -2

Query: 578  FSPSSPY--SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +SP+SP+  SPTSP YSP+S  YSPTSP  S +SP Y         TSP +SP+SP F+P
Sbjct: 1566 YSPTSPFNTSPTSPGYSPSS-GYSPTSPGMSITSPRYM--------TSPGFSPASPTFAP 1616

Query: 404  -STGYSPSQPGY----SPSSTSQYTP 342
             S  YSP+ PGY    SP+S S Y+P
Sbjct: 1617 TSPAYSPTSPGYGQAQSPTSPS-YSP 1641

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 43/75 (57%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSP+   SP    YSPTSP + SPTSP YSPSS  YSP+SP  S TSP Y  +SP FSP 
Sbjct: 1555 FSPAGARSPGG--YSPTSPFNTSPTSPGYSPSSG-YSPTSPGMSITSPRYM-TSPGFSPA 1610

Query: 404  STGYSPSQPGYSPSS 360
            S  ++P+ P YSP+S
Sbjct: 1611 SPTFAPTSPAYSPTS 1625

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
 Frame = -2

Query: 572  PSSPYSPTSPSYSPTS--------PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            P S +SP   + S T         P +   SP+ + S   YSP+SP+N+      SP+SP
Sbjct: 1526 PDSQFSPIGQTGSETPAGFTEYQPPGFGGFSPAGARSPGGYSPTSPFNT------SPTSP 1579

Query: 416  QFSPSTGYSPSQPGYSPSSTSQYT 345
             +SPS+GYSP+ PG S +S    T
Sbjct: 1580 GYSPSSGYSPTSPGMSITSPRYMT 1603

[161][TOP]
>UniRef100_C5PAJ4 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta
            SOWgp RepID=C5PAJ4_COCP7
          Length = 1746

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 17/105 (16%)
 Frame = -2

Query: 578  FSPSSP-----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            +SP+SP      SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP  S TSP YSP+SP 
Sbjct: 1621 YSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPA 1680

Query: 413  FSPSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
               +TG            Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1681 LGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFAGSP 1725

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            R+  S  +SP SP+++PTSP+YSPTSP Y    SP+SP+YSP+SP  S TSP YSP+SP 
Sbjct: 1600 RYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1659

Query: 413  FSP-STGYSPSQPGYSPSS 360
            FSP S  +SP+ P YSP+S
Sbjct: 1660 FSPASPAFSPTSPSYSPTS 1678

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
            FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP                   Y+P+SP 
Sbjct: 1646 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPG 1705

Query: 455  NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
             S TSP+ YSP+SP F  SP++   P+ PGYSP+S
Sbjct: 1706 WSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTS 1740

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 36/108 (33%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435
            +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP   G           TSP 
Sbjct: 1639 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPK 1698

Query: 434  YSPSSPQFSP------------------------STGYSPSQPGYSPS 363
            Y+P+SP +SP                        S GYSP+ P ++P+
Sbjct: 1699 YTPTSPGWSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTSPTFNPT 1746

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 7/86 (8%)
 Frame = -2

Query: 578  FSPSSPY--SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +SP+SP+  SPTSP YSP+S  YSPTSP  S +SP Y         TSP +SP+SP F+P
Sbjct: 1566 YSPTSPFNTSPTSPGYSPSS-GYSPTSPGMSITSPRYM--------TSPGFSPASPTFAP 1616

Query: 404  -STGYSPSQPGY----SPSSTSQYTP 342
             S  YSP+ PGY    SP+S S Y+P
Sbjct: 1617 TSPAYSPTSPGYGQAQSPTSPS-YSP 1641

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 43/75 (57%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSP+   SP    YSPTSP + SPTSP YSPSS  YSP+SP  S TSP Y  +SP FSP 
Sbjct: 1555 FSPAGARSPGG--YSPTSPFNTSPTSPGYSPSSG-YSPTSPGMSITSPRYM-TSPGFSPA 1610

Query: 404  STGYSPSQPGYSPSS 360
            S  ++P+ P YSP+S
Sbjct: 1611 SPTFAPTSPAYSPTS 1625

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
 Frame = -2

Query: 572  PSSPYSPTSPSYSPTS--------PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            P S +SP   + S T         P +   SP+ + S   YSP+SP+N+      SP+SP
Sbjct: 1526 PDSQFSPIGQTGSETPAGFTEYQPPGFGGFSPAGARSPGGYSPTSPFNT------SPTSP 1579

Query: 416  QFSPSTGYSPSQPGYSPSSTSQYT 345
             +SPS+GYSP+ PG S +S    T
Sbjct: 1580 GYSPSSGYSPTSPGMSITSPRYMT 1603

[162][TOP]
>UniRef100_C6F1F3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
           RepID=C6F1F3_9APIC
          Length = 225

 Score =  102 bits (254), Expect = 2e-20
 Identities = 49/75 (65%), Positives = 59/75 (78%), Gaps = 3/75 (4%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           ++SP+SP YSPTSP Y PTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP
Sbjct: 62  KYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSP 121

Query: 404 STGY--SPSQPGYSP 366
           ++    +PS P YSP
Sbjct: 122 TSPVPNNPSSPHYSP 136

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           +S +SP YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP  S TSP YSP+SP++SP 
Sbjct: 56  YSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 115

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           S  YSP+ P  +  S+  Y+P
Sbjct: 116 SPQYSPTSPVPNNPSSPHYSP 136

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
           S  YS TSP YSPTSP YSPTSP Y P+SP YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 53  SPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112

Query: 392 SPSQPGYSPSSTSQYTPKT 336
           SP+ P YSP+S     P +
Sbjct: 113 SPTSPQYSPTSPVPNNPSS 131

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 50/94 (53%), Positives = 61/94 (64%), Gaps = 15/94 (15%)
 Frame = -2

Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
           +SP+SP              +S  SP YS TSP YSPTSP YSP+SP Y P+SP  S TS
Sbjct: 29  YSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTS 88

Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           P YSP+SP++SP S  YSP+ P YSP+S  QY+P
Sbjct: 89  PKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSP 121

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
           ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP   P++P    +SP YSP   +SP+
Sbjct: 90  KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPV--PNNP----SSPHYSPYAIASPK 143

Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
           FSP S  YS S P Y  S  ++
Sbjct: 144 FSPTSPAYSISSPVYDQSGNAR 165

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 43/114 (37%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSP------------------SYSPSSPTYSPSSP 459
           ++SP+SP YSPTSP YSPTSP YSPTSP                   +SP+SP YS SSP
Sbjct: 97  KYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSP 156

Query: 458 YNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTPKTNDN-----KDDP 315
               +    + S    SP+    SP Q        S ++P    N      DDP
Sbjct: 157 VYDQSGNARNKSQHPLSPAYILQSPVQVKQHIQDVSVFSPIQQANAEGAQNDDP 210

[163][TOP]
>UniRef100_C6F1F0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
           RepID=C6F1F0_PLAVI
          Length = 218

 Score =  101 bits (252), Expect = 4e-20
 Identities = 50/74 (67%), Positives = 58/74 (78%), Gaps = 3/74 (4%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SPS
Sbjct: 56  YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 115

Query: 401 TGY--SPSQPGYSP 366
           +    +PS P YSP
Sbjct: 116 SPVPNNPSSPHYSP 129

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 48/77 (62%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
           S  YS TSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 53  SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 112

Query: 392 SPSQPGYSPSSTSQYTP 342
           SPS P  +  S+  Y+P
Sbjct: 113 SPSSPVPNNPSSPHYSP 129

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 50/96 (52%), Positives = 60/96 (62%), Gaps = 15/96 (15%)
 Frame = -2

Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
           +SP+SP              +S  SP YS TSP YSPTSP YSP+SP YSP+SP  S TS
Sbjct: 29  YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 88

Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
           P YSP+SP++SP S  YSP+ P YSPSS     P +
Sbjct: 89  PKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 124

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
           ++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP   P++P    +SP YSP   +SP+
Sbjct: 83  KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 136

Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
           FSP S  YS S P Y  S  ++
Sbjct: 137 FSPTSPAYSISSPVYDQSGNAR 158

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 47/99 (47%), Positives = 58/99 (58%), Gaps = 21/99 (21%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 450
           SS  + T   YSPTSP+                    YS TSP YSP+SP YSP+SP  S
Sbjct: 19  SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYS 78

Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
            TSP YSP+SP++SP S  YSP+ P YSP+S  QY+P +
Sbjct: 79  PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSPSS 116

[164][TOP]
>UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
            RepID=Q7SDN0_NEUCR
          Length = 1752

 Score =  101 bits (252), Expect = 4e-20
 Identities = 56/97 (57%), Positives = 70/97 (72%), Gaps = 7/97 (7%)
 Frame = -2

Query: 581  RFSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-YSPSSPQ 414
            R+SP+SP   +SPTSPSYSPTSPSYSP SP++  +SP+YSP+SP  S TSPD YSP+SP 
Sbjct: 1653 RYSPTSPAQQFSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPTWSPTSPDAYSPTSPS 1712

Query: 413  F--SPSTGYSPSQP-GYSPSSTSQYTPKTNDNKDDPG 312
            F  SP    SP+ P GYSP+S  QY+P+T    +  G
Sbjct: 1713 FQRSPGQQLSPTSPTGYSPTS-PQYSPRTPGRNNSGG 1748

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 55/115 (47%), Positives = 69/115 (60%), Gaps = 23/115 (20%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSY----------SPTSPSYSPTSPSYSPSSPT---YSPSSPYN--SG 447
            RF+ S  +SP+SPS+          SPTSPSYSPTSPSYSP+SP    YSP+SP    S 
Sbjct: 1606 RFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSP 1665

Query: 446  TSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
            TSP YSP+SP +SP        S  YSP+ P +SP+S   Y+P +   +  PG Q
Sbjct: 1666 TSPSYSPTSPSYSPASPAFQATSPSYSPASPTWSPTSPDAYSPTSPSFQRSPGQQ 1720

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 17/96 (17%)
 Frame = -2

Query: 578  FSPSSP---YSPTSPSYSP-----TSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDY 432
            +SPSSP   YSP+SP         +SP +SP+SPS+SP+SP     SP+SP  S TSP Y
Sbjct: 1585 YSPSSPAAGYSPSSPLLDSAGRFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSY 1644

Query: 431  SPSSP------QFSPSTGYSPSQPGYSPSSTSQYTP 342
            SP+SP        SP+  +SP+ P YSP+S S Y+P
Sbjct: 1645 SPASPAAARYSPTSPAQQFSPTSPSYSPTSPS-YSP 1679

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 16/101 (15%)
 Frame = -2

Query: 569  SSPYSPTSP-SYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-- 405
            +SP++PTSP SY      YSP+SP+  YSPSSP    +  + S  SP +SPSSP FSP  
Sbjct: 1571 TSPFTPTSPFSYG----GYSPSSPAAGYSPSSPLLDSAGRFAS--SPQFSPSSPSFSPTS 1624

Query: 404  ---------STGYSPSQPGYSPSS--TSQYTPKTNDNKDDP 315
                     S  YSP+ P YSP+S   ++Y+P +   +  P
Sbjct: 1625 PMLRPGSPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSP 1665

[165][TOP]
>UniRef100_C4JY44 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
            RepID=C4JY44_UNCRE
          Length = 1747

 Score =  101 bits (252), Expect = 4e-20
 Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 17/105 (16%)
 Frame = -2

Query: 578  FSPSSP-----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            +SP+SP      SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP  S TSP YSP+SP 
Sbjct: 1573 YSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPA 1632

Query: 413  FSPSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                TG            Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1633 LGGVTGRHLSPTSPTSPKYTPTSPGWSPTSPDAYSPTSPNFAGSP 1677

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            RF  S  +SP SPS++PTSP+YSPTSP Y    SP+SP+YSP+SP  S TSP YSP+SP 
Sbjct: 1552 RFMTSPGFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1611

Query: 413  FSP-STGYSPSQPGYSPSS 360
            FSP S  +SP+ P YSP+S
Sbjct: 1612 FSPASPAFSPTSPSYSPTS 1630

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 30/109 (27%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435
            +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP   G           TSP 
Sbjct: 1591 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGVTGRHLSPTSPTSPK 1650

Query: 434  YSPSSPQFSPST--GYSPSQ----------------PGYSPSSTSQYTP 342
            Y+P+SP +SP++   YSP+                 PGYSP+S + Y P
Sbjct: 1651 YTPTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLLPPGYSPTSPT-YNP 1698

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 47/104 (45%), Positives = 57/104 (54%), Gaps = 25/104 (24%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPS-------------------SPTYSPSSP 459
            FSP+   SP    YSPTSP + SPTSP YSPS                   SP +SP+SP
Sbjct: 1506 FSPAGARSPGG-GYSPTSPFNTSPTSPGYSPSSGYSPTSPGMGITSPRFMTSPGFSPASP 1564

Query: 458  YNSGTSPDYSPSSP-----QFSPSTGYSPSQPGYSPSSTSQYTP 342
              + TSP YSP+SP     Q   S  YSP+ PG+SP+S S Y+P
Sbjct: 1565 SFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPS-YSP 1607

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 3/58 (5%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSPS 402
            SP SPTSP Y+PTSP +SPTSP +YSP+SP +  SP+SP  S   P YSP+SP ++P+
Sbjct: 1642 SPTSPTSPKYTPTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLLPPGYSPTSPTYNPN 1699

[166][TOP]
>UniRef100_C5FCL2 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
            RepID=C5FCL2_NANOT
          Length = 1748

 Score =  100 bits (250), Expect = 6e-20
 Identities = 53/104 (50%), Positives = 68/104 (65%), Gaps = 16/104 (15%)
 Frame = -2

Query: 578  FSPSSP-----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP- 417
            +SP+SP      SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP  S TSP YSP+SP 
Sbjct: 1620 YSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSPTSPA 1679

Query: 416  ------QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                    SP    S  Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1680 LGGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFSGSP 1723

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            RF  S  +SP SPS++PTSP+YSPTSP Y    SP+SP+YSP+SP  S TSP YSP+SP 
Sbjct: 1599 RFISSPAFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1658

Query: 413  FSP-STGYSPSQPGYSPSS 360
            FSP S  +SP+ P YSP+S
Sbjct: 1659 FSPASPVFSPTSPSYSPTS 1677

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 14/90 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSP-YNSGTSPD 435
            FSP+SP +SPTSPSYSPTSP+           SPTSP Y+P+SP +SP+SP   S TSP+
Sbjct: 1659 FSPASPVFSPTSPSYSPTSPALGGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPN 1718

Query: 434  Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQ 351
            +  SP+SP    S GYSP+ P ++P+S  Q
Sbjct: 1719 FSGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1748

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
 Frame = -2

Query: 575  SPSSPYSPTSP-SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
            SP   YSP+SP + SPTSP+YSP+S  YSP+SP  S +SP    +SP +SP+SP F+P S
Sbjct: 1560 SPGGGYSPSSPFNTSPTSPAYSPSS-GYSPTSPGMSITSP-RFISSPAFSPASPSFAPTS 1617

Query: 401  TGYSPSQPGY----SPSSTSQYTP 342
              YSP+ PGY    SP+S S Y+P
Sbjct: 1618 PAYSPTSPGYGQAQSPTSPS-YSP 1640

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            FSP  P SP    YSP+SP + SPTSP+YSPSS  YSP+SP  S TSP +  SSP FSP 
Sbjct: 1553 FSPHEPRSPGG-GYSPSSPFNTSPTSPAYSPSSG-YSPTSPGMSITSPRFI-SSPAFSPA 1609

Query: 404  STGYSPSQPGYSPSS 360
            S  ++P+ P YSP+S
Sbjct: 1610 SPSFAPTSPAYSPTS 1624

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
 Frame = -2

Query: 572  PSSPYSPTSPSYSPTS--------PSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPS 423
            P S +SP   + S  +        PSY   SP + P SP   YSPSSP+N+      SP+
Sbjct: 1524 PDSQFSPVRQAGSENAVGFADYQPPSYGGFSP-HEPRSPGGGYSPSSPFNT------SPT 1576

Query: 422  SPQFSPSTGYSPSQPGYSPSS 360
            SP +SPS+GYSP+ PG S +S
Sbjct: 1577 SPAYSPSSGYSPTSPGMSITS 1597

[167][TOP]
>UniRef100_Q54LJ4 Type A von Willebrand factor domain-containing protein n=1
            Tax=Dictyostelium discoideum RepID=Q54LJ4_DICDI
          Length = 2563

 Score =  100 bits (249), Expect = 8e-20
 Identities = 48/73 (65%), Positives = 53/73 (72%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            F  S PYSPTSP Y PTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YS S    S S 
Sbjct: 1840 FQASQPYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQ 1899

Query: 398  GYSPSQPGYSPSS 360
             YSP  P Y+P+S
Sbjct: 1900 SYSPVSPSYTPTS 1912

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 52/103 (50%), Positives = 66/103 (64%), Gaps = 15/103 (14%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GTSPDYSPSS 420
            +SP+SP Y PTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S       TS  YSP S
Sbjct: 1846 YSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVS 1905

Query: 419  PQFSPST--------GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            P ++P++         YSP  P Y+P+  S+    T+ +   P
Sbjct: 1906 PSYTPTSLLYAPTIPSYSPVSPSYAPTKPSKLPVLTSYSPSSP 1948

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 45/77 (58%), Positives = 53/77 (68%)
 Frame = -2

Query: 572  PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
            P S +   S  YSPTSP Y PTSPSYSP+SP+YSP+SP  S TSP YSP+SP +S S  Y
Sbjct: 1835 PPSLFFQASQPYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLY 1894

Query: 392  SPSQPGYSPSSTSQYTP 342
            + +   YSP S S YTP
Sbjct: 1895 ASTSQSYSPVSPS-YTP 1910

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 15/91 (16%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYS-------------PTSPSYSPSSPTYSPSSPYNSGTS 441
            +SP+SP YSPTSPSYSPTSPSYS             P SPSY+P+S  Y+P+ P  S  S
Sbjct: 1867 YSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTSLLYAPTIPSYSPVS 1926

Query: 440  PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 351
            P Y+P+ P   P  T YSPS P +S S   +
Sbjct: 1927 PSYAPTKPSKLPVLTSYSPSSPSFSKSKAKE 1957

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 42/89 (47%), Positives = 50/89 (56%), Gaps = 12/89 (13%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
            S S  YSP SPSY+PTS  Y+PT PSYSP SP+Y+P+ P        YSPSSP FS S  
Sbjct: 1896 STSQSYSPVSPSYTPTSLLYAPTIPSYSPVSPSYAPTKPSKLPVLTSYSPSSPSFSKSKA 1955

Query: 395  YS---------PSQP---GYSPSSTSQYT 345
                       PS+P   GYS  ST  ++
Sbjct: 1956 KEESTLSEINLPSKPMVAGYSRMSTVSFS 1984

[168][TOP]
>UniRef100_O77375 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
            RepID=O77375_PLAF7
          Length = 2457

 Score =  100 bits (249), Expect = 8e-20
 Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP
Sbjct: 2294 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 2353

Query: 404  ST--GYSPSQPGYSPSS 360
            ++    + + P YSP S
Sbjct: 2354 TSPVAQNIASPNYSPYS 2370

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 48/71 (67%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  YS TSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 2285 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2344

Query: 392  SPSQPGYSPSS 360
            SP+ P YSP+S
Sbjct: 2345 SPTSPKYSPTS 2355

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
            +S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP 
Sbjct: 2288 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2347

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S  YSP+ P     ++  Y+P
Sbjct: 2348 SPKYSPTSPVAQNIASPNYSP 2368

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            +S Y+  SP YS TSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 2278 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2337

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S  +Y+P
Sbjct: 2338 SPTSPKYSPTS-PKYSP 2353

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP            YS +SP  S TSP
Sbjct: 2322 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 2381

Query: 437  DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330
             YS SSP +  S     + P  P Y   S  Q      D
Sbjct: 2382 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 2420

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 12/91 (13%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDY 432
            +SPS  YSPTSP+Y+  +  YSPTSP            Y+  SP YS +SP  S TSP Y
Sbjct: 2245 YSPS--YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKY 2302

Query: 431  SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP+SP++SP S  YSP+ P YSP+S  +Y+P
Sbjct: 2303 SPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2332

[169][TOP]
>UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
            RepID=B4MAN9_DROVI
          Length = 1889

 Score =  100 bits (249), Expect = 8e-20
 Identities = 49/97 (50%), Positives = 66/97 (68%), Gaps = 7/97 (7%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +S +SP YSP SPSYSP+SPSYSPTSP YSP+SP+YSP+SP  +  +P YSP+SP +S S
Sbjct: 1680 YSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739

Query: 401  TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
              YSP+ P YS +      ++  Y+P +      PG+
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776

 Score =  100 bits (248), Expect = 1e-19
 Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SP + YSP+S +YS  SPSYSP SPSYSPSSP+YSP+SP  S TSP YSP+SP ++P+T
Sbjct: 1667 YSPGNAYSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726

Query: 398  -GYSPSQPGYSPSSTSQYTP 342
              YSP+ P YS S    Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 50/100 (50%), Positives = 62/100 (62%), Gaps = 22/100 (22%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
            SP SP Y+P SP YSPTSP YSPTSP YSPSSP +SPS+ Y+      S TSP       
Sbjct: 1773 SPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832

Query: 437  -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
                    YSP+SP ++P+   YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
            +SP+SP YSPTSP+Y+P +PSYSPTSP+YS                    P+SPTYSP S
Sbjct: 1708 YSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767

Query: 461  PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
            P   G+         SP YSP+SP++SP++  YSPS P +SPS  +QY+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPS--NQYSP 1815

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
            SPS+ YSPT  +YS TSP YSP    YSPSS  YSP+SP  + T+ +YSP+SP +SP+  
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867

Query: 401  TGYSPSQPGYSPSS 360
            + YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 48/88 (54%), Positives = 62/88 (70%), Gaps = 7/88 (7%)
 Frame = -2

Query: 575  SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP    SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  + TS  Y+ ++P 
Sbjct: 1566 SPHFSTSPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSLRYASATPN 1625

Query: 413  FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
            F+P STGYSPS  GYSP+S   Y+P +N
Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTSN 1652

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            ++SP+SP YSP SPSY  SP SP Y+P SP YSP+SP YSP+SP  S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSN-QY 1813

Query: 410  SP--------STGYSPSQPGYSPSSTSQYTP 342
            SP        S  YSP+   YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 47/85 (55%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQ 414
            SPS   SP SP Y+P SP YSPTSP YSP+SP YSPSSP +      S T   YS +SP+
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1826

Query: 413  FSPSTG-YSPSQPGYSPSSTSQYTP 342
            +SP+   YSPS   YSP+S + YTP
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPT-YTP 1850

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -2

Query: 581  RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
            R+SP+ S YSP+S  YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F 
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885

Query: 407  PS 402
             S
Sbjct: 1886 ES 1887

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 56/148 (37%), Positives = 65/148 (43%), Gaps = 67/148 (45%)
 Frame = -2

Query: 578  FSPSSP-------------YSPTSPSYSPTSP---------------------------- 522
            +SP+SP             YSP+SP+YSPTSP                            
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSLRYASATPNFNPQSTGYSPSSS 1638

Query: 521  SYSPTSPSYSP-----SSPT--------------YSPSSPYNSGTSPDYSPSSPQFSPST 399
             YSPTSP YSP     SSP+              YSPSS   S  SP YSP SP +SPS+
Sbjct: 1639 GYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSSNSPSYSPMSPSYSPSS 1698

Query: 398  -GYSPSQPGYSPSSTS------QYTPKT 336
              YSP+ P YSP+S S       YTP T
Sbjct: 1699 PSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
 Frame = -2

Query: 578  FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
            FSPS   S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP    +   SP
Sbjct: 1518 FSPSGHVSGMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPHFSTSPSVSP 1577

Query: 437  DYSPSSPQFSPST------GYSPSQPGYSPSS 360
             YSP+SP ++ S+       YSPS P YSP+S
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609

[170][TOP]
>UniRef100_C8VQG7 DNA-directed RNA polymerase (EC 2.7.7.6)
            [Source:UniProtKB/TrEMBL;Acc:Q873Q6] n=2 Tax=Emericella
            nidulans RepID=C8VQG7_EMENI
          Length = 1745

 Score =  100 bits (248), Expect = 1e-19
 Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 21/109 (19%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSY---SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            F+P+SP YSPTSP+Y   SPTSPSYSPTSP +SP+SP YSP+SP  S TSP +SP+SP +
Sbjct: 1612 FAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSY 1671

Query: 410  SP-----------------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP                 S  Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1672 SPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1720

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 4/78 (5%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            RF  S  +SP SPS++PTSP+YSPTSP+Y   SP+SP+YSP+SP  S TSP+YSP+SP F
Sbjct: 1598 RFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSF 1657

Query: 410  SP-STGYSPSQPGYSPSS 360
            SP S  +SP+ P YSP+S
Sbjct: 1658 SPTSPAFSPTSPSYSPTS 1675

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 34/110 (30%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG---------TSPDYS 429
            +SP+SP +SPTSP+YSPTSPS+SPTSP++SP+SP+YSP+SP   G         TSP Y+
Sbjct: 1636 YSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYT 1695

Query: 428  PSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351
            P+SP +SP                        S GYSP+ P +SP+S  Q
Sbjct: 1696 PTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPTSPRQ 1745

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 17/96 (17%)
 Frame = -2

Query: 578  FSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSG 447
            +SP+S YSPTSP              +SP SPS++PTSP+YSP+SP Y   SP+SP  S 
Sbjct: 1579 YSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSP 1638

Query: 446  TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            TSP +SP+SP +SP S  +SP+ P +SP+S S Y+P
Sbjct: 1639 TSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPS-YSP 1673

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
 Frame = -2

Query: 578  FSPSSPYS--PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +SPSSP+S  PTSP YSPTS SYSPTSP    +SP +         TSP +SP+SP F+P
Sbjct: 1564 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFM--------TSPGFSPASPSFAP 1614

Query: 404  -STGYSPSQPG---YSPSSTSQYTP 342
             S  YSP+ P     SP+S S Y+P
Sbjct: 1615 TSPAYSPTSPAYGQASPTSPS-YSP 1638

[171][TOP]
>UniRef100_B6QAY2 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
            RepID=B6QAY2_PENMQ
          Length = 1744

 Score =  100 bits (248), Expect = 1e-19
 Identities = 55/112 (49%), Positives = 65/112 (58%), Gaps = 24/112 (21%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            FSP SP        YSPTSPS+  TSPSYSPTSP +SPSSP YSPSSP  S  SP +SPS
Sbjct: 1607 FSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSPASPAFSPS 1666

Query: 422  SPQFSP----------------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP +SP                S  YSP+ PG+SP+S   Y+P + +    P
Sbjct: 1667 SPTYSPTSPAIGGRQFSPSSPSSPKYSPASPGWSPTSPEIYSPTSPNIHGSP 1718

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 48/88 (54%), Positives = 66/88 (75%), Gaps = 6/88 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            RF  +SP +SP SP+++ TSP+YSPTSPS+  +SP+YSP+SP  S +SP+YSPSSP FSP
Sbjct: 1599 RFMSTSPGFSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSP 1658

Query: 404  -STGYSPSQPGYSPSSTS----QYTPKT 336
             S  +SPS P YSP+S +    Q++P +
Sbjct: 1659 ASPAFSPSSPTYSPTSPAIGGRQFSPSS 1686

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 44/90 (48%), Positives = 60/90 (66%), Gaps = 9/90 (10%)
 Frame = -2

Query: 578  FSPSSPY--SPTSP------SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SP+SP+  SP SP      SYSP+SP+ S TSP +  +SP +SP SP  + TSP YSP+
Sbjct: 1565 YSPTSPFNTSPVSPGYSPSSSYSPSSPNMSVTSPRFMSTSPGFSPQSPAFAITSPAYSPT 1624

Query: 422  SPQF-SPSTGYSPSQPGYSPSSTSQYTPKT 336
            SP F + S  YSP+ P +SPSS + Y+P +
Sbjct: 1625 SPSFQATSPSYSPTSPRFSPSSPN-YSPSS 1653

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 50/104 (48%), Positives = 65/104 (62%), Gaps = 27/104 (25%)
 Frame = -2

Query: 581  RFSPSSP--------YSPTSPSYSPTSPSYSPTSPS-----YSPSSPTY---SPSSPYNS 450
            RFSPSSP        +SP SP++SP+SP+YSPTSP+     +SPSSP+    SP+SP  S
Sbjct: 1641 RFSPSSPNYSPSSPNFSPASPAFSPSSPTYSPTSPAIGGRQFSPSSPSSPKYSPASPGWS 1700

Query: 449  GTSPD-YSPSSPQF-----SPSTG-----YSPSQPGYSPSSTSQ 351
             TSP+ YSP+SP       SP+ G     YSP+ P Y+P+S  Q
Sbjct: 1701 PTSPEIYSPTSPNIHGSPTSPARGATSPSYSPTSPQYNPTSPRQ 1744

[172][TOP]
>UniRef100_B6H9U6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
            54-1255 RepID=B6H9U6_PENCW
          Length = 1733

 Score =  100 bits (248), Expect = 1e-19
 Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 14/102 (13%)
 Frame = -2

Query: 578  FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417
            +SP+SP     SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP  S TSP YSP+SP  
Sbjct: 1610 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1669

Query: 416  ----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                  SP    S  Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1670 GGARHLSPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNFSGSP 1711

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 13/86 (15%)
 Frame = -2

Query: 578  FSPSSP---------YSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPD 435
            +SP+SP         +SP SP++ PTSP+YSPTSP+Y   SP+SP+YSP+SP  S TSP+
Sbjct: 1581 YSPTSPGIGMMTSPGFSPASPTFQPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPN 1640

Query: 434  YSPSSPQFSP-STGYSPSQPGYSPSS 360
            YSP+SP FSP S  +SP+ P YSP+S
Sbjct: 1641 YSPTSPSFSPASPAFSPTSPSYSPTS 1666

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 47/87 (54%), Positives = 59/87 (67%), Gaps = 11/87 (12%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY---------SPTSPSYSPSSPTYSPSSPYN-SGTSPDY 432
            FSP+SP +SPTSPSYSPTSP+          SPTSP Y+P+SP +SP+SP + S TSP++
Sbjct: 1648 FSPASPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNF 1707

Query: 431  SPSSPQFSPSTGYSPSQPGYSPSSTSQ 351
            S  SP    S  YSP+ P YSP+S  Q
Sbjct: 1708 S-GSPTSPTSPAYSPTSPAYSPTSPRQ 1733

 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 45/101 (44%), Positives = 55/101 (54%), Gaps = 26/101 (25%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPS---------------------SPTYSPS 465
            F   SP + +   YSPTSP + SPTSP YSPS                     SPT+ P+
Sbjct: 1547 FGGFSPAARSPGGYSPTSPFNTSPTSPGYSPSSSYSPTSPGIGMMTSPGFSPASPTFQPT 1606

Query: 464  SPYNSGTSPDY---SPSSPQFSP-STGYSPSQPGYSPSSTS 354
            SP  S TSP Y   SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1607 SPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPS 1647

[173][TOP]
>UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
            RepID=B2AA31_PODAN
          Length = 1748

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 6/87 (6%)
 Frame = -2

Query: 578  FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-YSPSSPQF 411
            +SP+SP    SPTSPSYSPTSPSYSP SP++  +SP+YSP+SP  S TSPD YSP+SP F
Sbjct: 1652 YSPTSPAQFQSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTF 1711

Query: 410  --SPSTGYSPSQPGYSPSSTSQYTPKT 336
              SP    SP+ PGYSP+S S ++P+T
Sbjct: 1712 QRSPGQQMSPTSPGYSPTSPS-FSPRT 1737

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 24/116 (20%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSP-------------YNS 450
            RF+ S  +SP+SPS+SPTSP     SPTSPSYSP+SP+YSP+SP             + S
Sbjct: 1603 RFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQS 1662

Query: 449  GTSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
             TSP YSP+SP +SP        S  YSP+ P +SP+S   Y+P +   +  PG Q
Sbjct: 1663 PTSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPGQQ 1718

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 10/71 (14%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSP-SYSPSSPTY--------SPSSPYNSGTSPDYS 429
            +SP+SP +  TSPSYSP SP++SPTSP +YSP+SPT+        SP+SP  S TSP +S
Sbjct: 1675 YSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPGQQMSPTSPGYSPTSPSFS 1734

Query: 428  PSSPQFSPSTG 396
            P +P  +  +G
Sbjct: 1735 PRTPGRAAGSG 1745

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 47/103 (45%), Positives = 57/103 (55%), Gaps = 25/103 (24%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSP-SYSPTSP---SYSPSSPT--YSPSSPY-----NSGTSPDYS 429
            S  +PY+ TSP   PTSP + SPTSP    YSP+SP   YSP+SP         +SP +S
Sbjct: 1554 SSVNPYA-TSPG-RPTSPFTTSPTSPFSYGYSPTSPAAGYSPTSPLIDAGGRFASSPQFS 1611

Query: 428  PSSPQFSP-----------STGYSPSQPGYSPSS---TSQYTP 342
            PSSP FSP           S  YSP+ P YSP+S   T  Y+P
Sbjct: 1612 PSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAATRHYSP 1654

[174][TOP]
>UniRef100_Q5KGG3 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
            RepID=Q5KGG3_CRYNE
          Length = 1786

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 55/93 (59%), Positives = 64/93 (68%), Gaps = 13/93 (13%)
 Frame = -2

Query: 581  RFSPSSPYSP-----------TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGTSP 438
            R SP SP SP           TSP YSPTSP YSPTSP++SP+SP+YSP+SP     TSP
Sbjct: 1641 RASPYSPTSPAYSPTSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAPFQATSP 1700

Query: 437  DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
             YSP+SPQFSP S  YSP+ P YSP+S  QY+P
Sbjct: 1701 RYSPTSPQFSPTSPTYSPASPAYSPTS-PQYSP 1732

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 49/101 (48%), Positives = 60/101 (59%), Gaps = 27/101 (26%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG------------------- 447
            S  YSPTSP YSPTSP +SPTSPS+SPSSPTYSP+SP   G                   
Sbjct: 1595 SPAYSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSP 1654

Query: 446  -------TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 348
                   TSP YSP+SP++SP S  +SP+ P YSP+S + +
Sbjct: 1655 TSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAPF 1695

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 9/98 (9%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPS--------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
            FSP+SP YSPTSP+        YSPTSP +SPTSP+YSP+SP YSP+SP  S TSP YSP
Sbjct: 1680 FSPTSPSYSPTSPAPFQATSPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSP 1739

Query: 425  SSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            +SP       YSP+ P Y  ++ +  T +  + +  PG
Sbjct: 1740 TSP------AYSPTSPAYGGAAPNGGTAQQQNGQARPG 1771

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 35/114 (30%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSP----------------SYSPTSPSYSPSSPTYSPSSPYNSG 447
            +SP+SP++ TSP+YSPTSP                 Y  TSP+YSP+SP YSP+SP  S 
Sbjct: 1555 YSPTSPFAVTSPAYSPTSPFAGAAAGAASPWVGRGGYGATSPAYSPTSPQYSPTSPQFSP 1614

Query: 446  TSPDYSPSSPQFSP-------------STGYSPSQPGYSPSS------TSQYTP 342
            TSP +SPSSP +SP             ++ YSP+ P YSP+S      + QY+P
Sbjct: 1615 TSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSPTSPMGGITSPQYSP 1668

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP Y  ++P           + P +  +
Sbjct: 1716 YSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYGGAAPNGGTAQQQNGQARPGWGNT 1775

Query: 401  TGYSPS 384
             GY  S
Sbjct: 1776 GGYGTS 1781

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 43/99 (43%), Positives = 56/99 (56%), Gaps = 26/99 (26%)
 Frame = -2

Query: 578  FSPSSPYSPTSPS-YSPTSPS-YSPTSPSYSPSSPTYSPSSPY----------------- 456
            +  S  +   SP+ YSP+SP+ YSPTSP ++ +SP YSP+SP+                 
Sbjct: 1533 YGQSPMHGGMSPAGYSPSSPAGYSPTSP-FAVTSPAYSPTSPFAGAAAGAASPWVGRGGY 1591

Query: 455  ------NSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
                   S TSP YSP+SPQFSP S  +SPS P YSP+S
Sbjct: 1592 GATSPAYSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPAS 1630

[175][TOP]
>UniRef100_Q9HGZ5 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=Q9HGZ5_ASPOR
          Length = 1748

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
 Frame = -2

Query: 578  FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417
            +SP+SP     SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP  S TSP YSP+SP  
Sbjct: 1621 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1680

Query: 416  -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                   SP    S  Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1681 GGAARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1723

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 25/98 (25%)
 Frame = -2

Query: 578  FSPSSPYSPT---------------------SPSYSPTSPSYSPTSPSY---SPSSPTYS 471
            +SPSS YSPT                     SPS++PTSP+YSPTSP+Y   SP+SP+YS
Sbjct: 1580 YSPSSSYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYS 1639

Query: 470  PSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
            P+SP  S TSP+YSP+SP FSP S  +SP+ P YSP+S
Sbjct: 1640 PTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1677

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 14/90 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435
            FSP+SP +SPTSPSYSPTSP+           SPTSP Y+P+SP +SP+SP   S TSP+
Sbjct: 1659 FSPASPAFSPTSPSYSPTSPAIGGAARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1718

Query: 434  Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQ 351
            +  SP+SP    S GYSP+ P +SPSS  Q
Sbjct: 1719 FAGSPTSPGGPTSPGYSPTSPAFSPSSPRQ 1748

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 49/91 (53%), Positives = 63/91 (69%), Gaps = 12/91 (13%)
 Frame = -2

Query: 578  FSPSSPYS--PTSP------SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            +SPSSP+S  PTSP      SYSPTSP  + TSP +S +SP +SP+SP  + TSP YSP+
Sbjct: 1565 YSPSSPFSANPTSPGYSPSSSYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPT 1624

Query: 422  SP---QFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP   Q SP S  YSP+ PG+SP+S + Y+P
Sbjct: 1625 SPAYGQASPTSPSYSPTSPGFSPTSPN-YSP 1654

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
 Frame = -2

Query: 578  FSPSSPYSPTSPS-YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            FSP++    TSP+ YSP+SP S +PTSP YSPSS +YSP+SP  + TSP +S +SP FSP
Sbjct: 1555 FSPAA----TSPAGYSPSSPFSANPTSPGYSPSS-SYSPTSPGMAMTSPRFSMTSPGFSP 1609

Query: 404  -STGYSPSQPGYSPSS 360
             S  ++P+ P YSP+S
Sbjct: 1610 ASPSFAPTSPAYSPTS 1625

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 45/97 (46%), Positives = 57/97 (58%), Gaps = 24/97 (24%)
 Frame = -2

Query: 560  YSPTSP---SYSP--TSPS-YSPTSP-SYSPSSPTYSPSSPYN-------------SGTS 441
            Y PT      +SP  TSP+ YSP+SP S +P+SP YSPSS Y+             S TS
Sbjct: 1545 YQPTGGFGGGFSPAATSPAGYSPSSPFSANPTSPGYSPSSSYSPTSPGMAMTSPRFSMTS 1604

Query: 440  PDYSPSSPQFSP-STGYSPSQPGY---SPSSTSQYTP 342
            P +SP+SP F+P S  YSP+ P Y   SP+S S Y+P
Sbjct: 1605 PGFSPASPSFAPTSPAYSPTSPAYGQASPTSPS-YSP 1640

[176][TOP]
>UniRef100_B0XMU6 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
            RepID=B0XMU6_ASPFC
          Length = 1750

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 4/78 (5%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            RF  S  +SP SPS++PTSP+YSPTSP+Y   SP+SP+YSP+SP  S TSP+YSP+SP F
Sbjct: 1599 RFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSF 1658

Query: 410  SP-STGYSPSQPGYSPSS 360
            SP S  +SP+ P YSP+S
Sbjct: 1659 SPASPAFSPTSPSYSPTS 1676

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
 Frame = -2

Query: 578  FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417
            +SP+SP     SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP  S TSP YSP+SP  
Sbjct: 1620 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1679

Query: 416  -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                   SP    S  Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1680 GGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1722

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 17/96 (17%)
 Frame = -2

Query: 578  FSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSG 447
            +SP+S YSPTSP              +SP SPS++PTSP+YSP+SP Y   SP+SP  S 
Sbjct: 1580 YSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSP 1639

Query: 446  TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            TSP +SP+SP +SP S  +SP+ P +SP+S S Y+P
Sbjct: 1640 TSPGFSPTSPNYSPTSPSFSPASPAFSPTSPS-YSP 1674

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 49/96 (51%), Positives = 63/96 (65%), Gaps = 14/96 (14%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435
            FSP+SP +SPTSPSYSPTSP+           SPTSP Y+P+SP +SP+SP   S TSP+
Sbjct: 1658 FSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1717

Query: 434  Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTN 333
            +  SP+SP    S GYSP+ P +SPS    Y P ++
Sbjct: 1718 FAGSPTSPGGPTSPGYSPTSPAFSPS----YVPSSS 1749

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
 Frame = -2

Query: 578  FSPSSPYS--PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +SPSSP+S  PTSP YSPTS SYSPTSP    +SP +         TSP +SP+SP F+P
Sbjct: 1565 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFM--------TSPGFSPASPSFAP 1615

Query: 404  -STGYSPSQPG---YSPSSTSQYTP 342
             S  YSP+ P     SP+S S Y+P
Sbjct: 1616 TSPAYSPTSPAYGQASPTSPS-YSP 1639

[177][TOP]
>UniRef100_A2QAT7 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
            RepID=A2QAT7_ASPNC
          Length = 1747

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
 Frame = -2

Query: 578  FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417
            +SP+SP     SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP  S TSP YSP+SP  
Sbjct: 1620 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAV 1679

Query: 416  -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                   SP    S  Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1680 GGVGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1722

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 25/98 (25%)
 Frame = -2

Query: 578  FSPSSPYSPT---------------------SPSYSPTSPSYSPTSPSY---SPSSPTYS 471
            +SP+S YSPT                     SPS++PTSP+YSPTSP+Y   SP+SP+YS
Sbjct: 1579 YSPTSSYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYS 1638

Query: 470  PSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
            P+SP  S TSP+YSP+SP FSP S  +SP+ P YSP+S
Sbjct: 1639 PTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1676

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 14/90 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435
            FSP+SP +SPTSPSYSPTSP+           SPTSP Y+P+SP +SP+SP   S TSP+
Sbjct: 1658 FSPASPAFSPTSPSYSPTSPAVGGVGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1717

Query: 434  Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQ 351
            +  SP+SP    S GYSP+ P +SP+S  Q
Sbjct: 1718 FAGSPTSPGGPTSPGYSPTSPAFSPTSPRQ 1747

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 13/92 (14%)
 Frame = -2

Query: 578  FSPSSPYS--PTSPSYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYNSGTSPDYSP 426
            +SPSSP+S  PTSP YSPTS SYSPTSP        +  +SP +SP+SP  + TSP YSP
Sbjct: 1564 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSP 1622

Query: 425  SSP---QFSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP   Q SP S  YSP+ PG+SP+S + Y+P
Sbjct: 1623 TSPAYGQASPTSPSYSPTSPGFSPTSPN-YSP 1653

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/76 (52%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
 Frame = -2

Query: 578  FSPSSPYSPTSPS-YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            FSP++    TSP+ YSP+SP S +PTSP YSP+S +YSP+SP  + TSP +  +SP FSP
Sbjct: 1554 FSPAA----TSPAGYSPSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSP 1608

Query: 404  -STGYSPSQPGYSPSS 360
             S  ++P+ P YSP+S
Sbjct: 1609 ASPSFAPTSPAYSPTS 1624

[178][TOP]
>UniRef100_A1D1U9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
            RepID=A1D1U9_NEOFI
          Length = 1750

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 4/78 (5%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            RF  S  +SP SPS++PTSP+YSPTSP+Y   SP+SP+YSP+SP  S TSP+YSP+SP F
Sbjct: 1599 RFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSF 1658

Query: 410  SP-STGYSPSQPGYSPSS 360
            SP S  +SP+ P YSP+S
Sbjct: 1659 SPASPAFSPTSPSYSPTS 1676

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
 Frame = -2

Query: 578  FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417
            +SP+SP     SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP  S TSP YSP+SP  
Sbjct: 1620 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1679

Query: 416  -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                   SP    S  Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1680 GGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1722

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 17/96 (17%)
 Frame = -2

Query: 578  FSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSG 447
            +SP+S YSPTSP              +SP SPS++PTSP+YSP+SP Y   SP+SP  S 
Sbjct: 1580 YSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSP 1639

Query: 446  TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            TSP +SP+SP +SP S  +SP+ P +SP+S S Y+P
Sbjct: 1640 TSPGFSPTSPNYSPTSPSFSPASPAFSPTSPS-YSP 1674

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 49/96 (51%), Positives = 63/96 (65%), Gaps = 14/96 (14%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435
            FSP+SP +SPTSPSYSPTSP+           SPTSP Y+P+SP +SP+SP   S TSP+
Sbjct: 1658 FSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1717

Query: 434  Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTN 333
            +  SP+SP    S GYSP+ P +SPS    Y P ++
Sbjct: 1718 FAGSPTSPGGPTSPGYSPTSPAFSPS----YVPSSS 1749

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
 Frame = -2

Query: 578  FSPSSPYS--PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            +SPSSP+S  PTSP YSPTS SYSPTSP    +SP +         TSP +SP+SP F+P
Sbjct: 1565 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFM--------TSPGFSPASPSFAP 1615

Query: 404  -STGYSPSQPG---YSPSSTSQYTP 342
             S  YSP+ P     SP+S S Y+P
Sbjct: 1616 TSPAYSPTSPAYGQASPTSPS-YSP 1639

[179][TOP]
>UniRef100_A1CNZ4 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
            RepID=A1CNZ4_ASPCL
          Length = 1765

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
 Frame = -2

Query: 578  FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417
            +SP+SP     SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP  S TSP YSP+SP  
Sbjct: 1627 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1686

Query: 416  -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                   SP    S  Y+P+ PG+SP+S   Y+P + +    P
Sbjct: 1687 GGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1729

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 4/77 (5%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            F  S  +SP SPS++PTSP+YSPTSP+Y   SP+SP+YSP+SP  S TSP+YSP+SP FS
Sbjct: 1607 FMTSPGFSPVSPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFS 1666

Query: 407  P-STGYSPSQPGYSPSS 360
            P S  +SP+ P YSP+S
Sbjct: 1667 PASPAFSPTSPSYSPTS 1683

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 44/80 (55%), Positives = 59/80 (73%), Gaps = 4/80 (5%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDYSPSSPQFSP-S 402
            +SP   TSP +SP SPS++PTSP+YSP+SP Y   SP+SP  S TSP +SP+SP +SP S
Sbjct: 1603 TSPGFMTSPGFSPVSPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTS 1662

Query: 401  TGYSPSQPGYSPSSTSQYTP 342
              +SP+ P +SP+S S Y+P
Sbjct: 1663 PSFSPASPAFSPTSPS-YSP 1681

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 47/86 (54%), Positives = 59/86 (68%), Gaps = 14/86 (16%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435
            FSP+SP +SPTSPSYSPTSP+           SPTSP Y+P+SP +SP+SP   S TSP+
Sbjct: 1665 FSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1724

Query: 434  Y--SPSSPQFSPSTGYSPSQPGYSPS 363
            +  SP+SP    S GYSP+ P +SPS
Sbjct: 1725 FAGSPTSPGGPTSPGYSPTSPAFSPS 1750

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 19/98 (19%)
 Frame = -2

Query: 578  FSPSSPYS--PTSPSYSPTSPSYSP-----------------TSPSYSPSSPTYSPSSPY 456
            +SP+SP+S  PTSP YSPT+ SYSP                 TSP +SP SP+++P+SP 
Sbjct: 1568 YSPTSPFSANPTSPGYSPTT-SYSPIAPGITSPRFNTSPGFMTSPGFSPVSPSFAPTSPA 1626

Query: 455  NSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
             S TSP Y  +SP  SPS  YSP+ PG+SP+S + Y+P
Sbjct: 1627 YSPTSPAYGQASPT-SPS--YSPTSPGFSPTSPN-YSP 1660

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 43/74 (58%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSPSTG 396
            SP SPTSP Y+PTSP +SPTSP +YSP+SP +  SP+SP    TSP YSP+SP FSPS  
Sbjct: 1694 SPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSP-GGPTSPGYSPTSPAFSPS-- 1750

Query: 395  YSPSQPGYSPSSTS 354
            Y P  P      TS
Sbjct: 1751 YVPPPPCLIDDCTS 1764

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578  FSPSSPYSPTSPS-YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
            FSP++    TSP+ YSPTSP S +PTSP YSP++ +YSP +P    TSP ++ +SP F  
Sbjct: 1558 FSPAA----TSPAGYSPTSPFSANPTSPGYSPTT-SYSPIAP--GITSPRFN-TSPGFMT 1609

Query: 404  STGYSPSQPGYSPSSTSQYTP 342
            S G+SP  P ++P+S + Y+P
Sbjct: 1610 SPGFSPVSPSFAPTSPA-YSP 1629

[180][TOP]
>UniRef100_B3L428 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
            RepID=B3L428_PLAKH
          Length = 2353

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393
            S  YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SP++   
Sbjct: 2195 SPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVP 2254

Query: 392  -SPSQPGYSP 366
             SPS P YSP
Sbjct: 2255 NSPSSPHYSP 2264

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  Y+ TSP YSPTSP YSPTSP Y P+SP YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 2188 SPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 2247

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P  +  S+  Y+P
Sbjct: 2248 SPTSPVPNSPSSPHYSP 2264

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 47/96 (48%), Positives = 61/96 (63%), Gaps = 15/96 (15%)
 Frame = -2

Query: 578  FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
            +SP+SP              +S  SP+Y+ TSP YSPTSP YSP+SP Y P+SP  S TS
Sbjct: 2164 YSPTSPKNQMDEMNPNMMKYHSVLSPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTS 2223

Query: 440  PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
            P YSP+SP++SP S  YSP+ P YSP+S    +P +
Sbjct: 2224 PKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNSPSS 2259

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP   P+SP    +SP YSP   +SP+
Sbjct: 2218 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPV--PNSP----SSPHYSPYAIASPK 2271

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            FSP S  YS S P Y  SS ++
Sbjct: 2272 FSPTSPAYSISSPVYDQSSNAR 2293

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 48/137 (35%), Positives = 60/137 (43%), Gaps = 59/137 (43%)
 Frame = -2

Query: 575  SPSSPYSPTSPS--YSPT--------SPSYSPTSPS---------------------YSP 489
            SP+  YSP  P   +SP         SPSYSPTSP+                     YSP
Sbjct: 2107 SPAMLYSPNRPLDIFSPKQQTQNNIYSPSYSPTSPTYHLSSNVNAGGSSGLNDTKAFYSP 2166

Query: 488  ---------------------------SSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
                                       +SP YSP+SP  S TSP Y P+SP++SP S  Y
Sbjct: 2167 TSPKNQMDEMNPNMMKYHSVLSPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKY 2226

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P YSP+S  +Y+P
Sbjct: 2227 SPTSPKYSPTS-PKYSP 2242

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 39/107 (36%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSP------------------SYSPTSPSYSPSSPTYSPSSP 459
            ++SP+SP YSPTSP YSPTSP                   +SPTSP+YS SSP Y  SS 
Sbjct: 2232 KYSPTSPKYSPTSPQYSPTSPVPNSPSSPHYSPYAIASPKFSPTSPAYSISSPVYDQSS- 2290

Query: 458  YNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
              +  + +  P SP +      SP Q        S ++P    N D+
Sbjct: 2291 --NARNRNQHPLSPAYILQ---SPVQVKQHIQDVSVFSPIQQANADE 2332

[181][TOP]
>UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
            RepID=Q4P7Q0_USTMA
          Length = 1774

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 10/83 (12%)
 Frame = -2

Query: 578  FSPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPT---YSPSSP---YNSGTSPDYSP 426
            +SP+SP      TSPSYSPTSPSYSP SP+YSPSSP    YSPSSP   Y + TSP YSP
Sbjct: 1594 YSPTSPRIFGGATSPSYSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSP 1653

Query: 425  SSPQFSP-STGYSPSQPGYSPSS 360
            +SP+FSP S  YSP+ P Y+P+S
Sbjct: 1654 ASPKFSPTSPNYSPASPAYTPTS 1676

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 47/93 (50%), Positives = 62/93 (66%), Gaps = 14/93 (15%)
 Frame = -2

Query: 578  FSPSSP-----------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS--P 438
            +SPSSP           YSP SP +SPTSP+YSP SP+Y+P+SP YSP+SP  +G     
Sbjct: 1634 YSPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPASPAYTPTSPVYSPTSPAMAGRGGGK 1693

Query: 437  DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
             +SP+SP +SP S  YSP+ P +SP+S  QY+P
Sbjct: 1694 GFSPTSPAYSPTSPQYSPASPAFSPTS-PQYSP 1725

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 48/103 (46%), Positives = 61/103 (59%), Gaps = 24/103 (23%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSP--------------------TSPSYSPTSPSYSPSSPTYSPSS 462
            +SP+SP YSP SP+YSP                    TSP YSP SP +SP+SP YSP+S
Sbjct: 1610 YSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPAS 1669

Query: 461  PYNSGTSPDYSPSSPQFS---PSTGYSPSQPGYSPSSTSQYTP 342
            P  + TSP YSP+SP  +      G+SP+ P YSP+S  QY+P
Sbjct: 1670 PAYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTS-PQYSP 1711

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 10/83 (12%)
 Frame = -2

Query: 578  FSPSSP----------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SP+SP          +SPTSP+YSPTSP YSP SP++SP+SP YSP+SP  S TSP YS
Sbjct: 1679 YSPTSPAMAGRGGGKGFSPTSPAYSPTSPQYSPASPAFSPTSPQYSPASPQYSPTSPQYS 1738

Query: 428  PSSPQFSPSTGYSPSQPGYSPSS 360
            P+SP      G S   PG + +S
Sbjct: 1739 PTSPAMGMG-GASAGGPGAAAAS 1760

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 43/96 (44%), Positives = 50/96 (52%), Gaps = 24/96 (25%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPS------------------SPTYSPSSP--Y 456
            +P    SP    +SP SP Y PTSP Y+ S                  SP YSP+SP  +
Sbjct: 1543 TPLGAQSPAGYGFSPVSPGYVPTSPGYATSPAGALGGMSPWTGNMGATSPAYSPTSPRIF 1602

Query: 455  NSGTSPDYSPSSPQFSP-STGYSPSQP---GYSPSS 360
               TSP YSP+SP +SP S  YSPS P   GYSPSS
Sbjct: 1603 GGATSPSYSPTSPSYSPASPNYSPSSPAGAGYSPSS 1638

[182][TOP]
>UniRef100_Q2HDK0 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
            RepID=Q2HDK0_CHAGB
          Length = 1756

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 53/87 (60%), Positives = 65/87 (74%), Gaps = 6/87 (6%)
 Frame = -2

Query: 578  FSPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-YSPSSPQF 411
            +SP+SP    SPTSPSYSPTSPSYSP SP+   +SP+YSP+SP  S TSPD YSP+SP F
Sbjct: 1650 YSPTSPQQFNSPTSPSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSF 1709

Query: 410  --SPSTGYSPSQPGYSPSSTSQYTPKT 336
              SP    SP+ PGYSP+S S ++P+T
Sbjct: 1710 HRSPGQQMSPTSPGYSPTSPS-FSPRT 1735

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 24/116 (20%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSP-------------YNS 450
            R++ S  +SP+SPS+SPTSP     SPTSP+YSP+SP+YSP+SP             +NS
Sbjct: 1601 RYASSPQFSPSSPSFSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNS 1660

Query: 449  GTSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
             TSP YSP+SP +SP        S  YSP+ P +SP+S   Y+P +      PG Q
Sbjct: 1661 PTSPSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQ 1716

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 51/105 (48%), Positives = 63/105 (60%), Gaps = 26/105 (24%)
 Frame = -2

Query: 578  FSPSSPY----SPTSPSYSPTSPSYSP--------------------TSPSYSPSSPTYS 471
            FSP+SP     SPTSP+YSPTSPSYSP                    TSPSYSP+SP+YS
Sbjct: 1615 FSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNSPTSPSYSPTSPSYS 1674

Query: 470  PSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 342
            P+SP    TSP YSP+SP +SP++   YSP+ P +  S   Q +P
Sbjct: 1675 PASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSP 1719

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 21/88 (23%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSP-SYSPTSPSY--------SPSSPTYSPSSPYNS 450
            +SP+SP        YSP SP++SPTSP +YSPTSPS+        SP+SP YSP      
Sbjct: 1673 YSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSPTSPGYSP------ 1726

Query: 449  GTSPDYSPSSPQFSPSTG----YSPSQP 378
             TSP +SP +P   PS G    YSP+ P
Sbjct: 1727 -TSPSFSPRTPGRGPSGGSGDQYSPTSP 1753

[183][TOP]
>UniRef100_B8M2Y2 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
            RepID=B8M2Y2_TALSN
          Length = 1755

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 54/111 (48%), Positives = 65/111 (58%), Gaps = 23/111 (20%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
            FSPSSP        YSPTSPSY   SPSYSPTSP +SPSSP YSPSSP  S +SP +SP+
Sbjct: 1606 FSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPT 1665

Query: 422  SPQFSP---------------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP +SP               S  YSP+ P +SP+S   Y+P + +    P
Sbjct: 1666 SPTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSPTSPEIYSPTSPNIHGSP 1716

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-P 405
            RF  S  +SP+SP++  TSP+YSPTSPSY  +SP+YSP+SP  S +SP+YSPSSP  S  
Sbjct: 1599 RFVTSPGFSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLS 1658

Query: 404  STGYSPSQPGYSPSS-----TSQYTPKTN 333
            S  +SP+ P YSP+S     T Q++  T+
Sbjct: 1659 SPAFSPTSPTYSPTSPAIGGTRQFSSPTS 1687

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 25/104 (24%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-------YNSGTSPDYSPS 423
            +SP+SP +SP+SP+YSP+SP+ S +SP++SP+SPTYSP+SP       ++S TSP YSP+
Sbjct: 1634 YSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPA 1693

Query: 422  SPQFSPSTGY-----------SPSQP---GYSPS---STSQYTP 342
            SP +SP++             SP+ P   G SPS   ++ QY P
Sbjct: 1694 SPAWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNP 1737

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/112 (41%), Positives = 59/112 (52%), Gaps = 39/112 (34%)
 Frame = -2

Query: 581  RFSPSSP---------------YSPTSPSYSPTSPSY-------SPTSPSYSPSSPTY-- 474
            RFSPSSP               +SPTSP+YSPTSP+        SPTSP YSP+SP +  
Sbjct: 1640 RFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSP 1699

Query: 473  ---------------SPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPS 363
                           SP+SP   GTSP YSP+SPQ++P+  Y  + PG  P+
Sbjct: 1700 TSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNPT--YVYTNPGEVPA 1749

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 24/99 (24%)
 Frame = -2

Query: 578  FSPSSP--------YSPTSPSYSP-------TSPSYSPTSPSYSPSSPTYSPSSP----- 459
            +SP+SP        YSPTSP +SP       +SP+ S +SP++SP+SPTYSP+SP     
Sbjct: 1620 YSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGT 1679

Query: 458  --YNSGTSPDYSPSSPQFSPSTG--YSPSQPGYSPSSTS 354
              ++S TSP YSP+SP +SP++   YSP+ P    S TS
Sbjct: 1680 RQFSSPTSPKYSPASPAWSPTSPEIYSPTSPNIHGSPTS 1718

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPS-YSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            SP+SP YSP SP++SPTSP  YSPTSP+   SP+SP    +SP  S TSP Y+P+    +
Sbjct: 1684 SPTSPKYSPASPAWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNPTYVYTN 1743

Query: 407  PSTGYSP 387
            P    +P
Sbjct: 1744 PGEVPAP 1750

[184][TOP]
>UniRef100_Q0D054 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
            RepID=Q0D054_ASPTN
          Length = 1742

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 51/93 (54%), Positives = 63/93 (67%), Gaps = 14/93 (15%)
 Frame = -2

Query: 578  FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417
            +SP+SP     SPTSPSYSPTSP +SPTSP+YSP+SP  SP+SP  S TSP YSP+SP  
Sbjct: 1620 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPSYSPTSPAL 1679

Query: 416  ----QFSP----STGYSPSQPGYSPSSTSQYTP 342
                  SP    S  Y+P+ PG+SP+S   Y+P
Sbjct: 1680 GAGRNMSPTSPTSPKYTPTSPGWSPTSPQSYSP 1712

 Score = 90.9 bits (224), Expect = 7e-17
 Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 17/90 (18%)
 Frame = -2

Query: 578  FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSG 447
            +SP+SP             +SP SP++ PTSP+YSPTSP+Y   SP+SP+YSP+SP  S 
Sbjct: 1587 YSPTSPGMGITSPRMTSPGFSPASPAFGPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSP 1646

Query: 446  TSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
            TSP+YSP+SP  SP S  +SP+ P YSP+S
Sbjct: 1647 TSPNYSPTSPNLSPASPVFSPTSPSYSPTS 1676

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 51/95 (53%), Positives = 64/95 (67%), Gaps = 16/95 (16%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTY---------SPSSPYNSGTSPDYS 429
            FSP+SP YSPTSP+ SP SP +SPTSPSYSP+SP           SP+SP  + TSP +S
Sbjct: 1644 FSPTSPNYSPTSPNLSPASPVFSPTSPSYSPTSPALGAGRNMSPTSPTSPKYTPTSPGWS 1703

Query: 428  PSSPQF----SPSTGYSPSQPG--YSPSSTSQYTP 342
            P+SPQ     SP+ G SP+ PG  YSP+S + Y+P
Sbjct: 1704 PTSPQSYSPTSPNIGGSPTSPGGAYSPTSPT-YSP 1737

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 43/79 (54%), Positives = 54/79 (68%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
            +SPSS YSPTSP    TSP    TSP +SP+SP + P+SP  S TSP Y  +SP  SPS 
Sbjct: 1581 YSPSSSYSPTSPGMGITSPRM--TSPGFSPASPAFGPTSPAYSPTSPAYGQASPT-SPS- 1636

Query: 398  GYSPSQPGYSPSSTSQYTP 342
             YSP+ PG+SP+S + Y+P
Sbjct: 1637 -YSPTSPGFSPTSPN-YSP 1653

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 47/88 (53%), Positives = 56/88 (63%), Gaps = 13/88 (14%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSY------SPTSPSYSPSSPTYSPSSPYNSGTSP-DYSPSS 420
            SP+SP +SPTSPSYSPTSP+       SPT    SP+SP Y+P+SP  S TSP  YSP+S
Sbjct: 1659 SPASPVFSPTSPSYSPTSPALGAGRNMSPT----SPTSPKYTPTSPGWSPTSPQSYSPTS 1714

Query: 419  PQF-----SPSTGYSPSQPGYSPSSTSQ 351
            P       SP   YSP+ P YSP+S  Q
Sbjct: 1715 PNIGGSPTSPGGAYSPTSPTYSPTSPRQ 1742

[185][TOP]
>UniRef100_A6SI63 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
            RepID=A6SI63_BOTFB
          Length = 1742

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 56/103 (54%), Positives = 68/103 (66%), Gaps = 19/103 (18%)
 Frame = -2

Query: 578  FSPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTY-----------SPSSPYNSGTS 441
            +SP+SP    SPTSPSYSPTSPSYSPTSP+YSP+SP Y           SP+SP  S TS
Sbjct: 1640 YSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTS 1699

Query: 440  PDYSPSSPQF---SPSTGYSPSQPGYSPSST--SQYTPKTNDN 327
            P++SPSSPQ    S S  YSP+ P YSP+S   S  +P+  +N
Sbjct: 1700 PNWSPSSPQHQGNSTSPKYSPTSPSYSPTSPNFSPTSPRGGNN 1742

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 16/104 (15%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            +SP+SP   SPTSPSYSPTSP+YSPTSP+   SP+SP+YSP+SP  S TSP+YSP+SP +
Sbjct: 1618 YSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNY 1677

Query: 410  -----SPSTG-------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                 SP +G       YSP+ P +SPSS     P+   N   P
Sbjct: 1678 AGNKVSPGSGLSPTSPVYSPTSPNWSPSS-----PQHQGNSTSP 1716

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 17/96 (17%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TS 441
            +SP+SP YSPTSP+   SPTSPSYSPTSPSYSP+SP YSP+SP  +G           TS
Sbjct: 1633 YSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTS 1692

Query: 440  PDYSPSSPQFSPSTGY---SPSQPGYSPSSTSQYTP 342
            P YSP+SP +SPS+     + + P YSP+S S Y+P
Sbjct: 1693 PVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPS-YSP 1727

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 36/126 (28%)
 Frame = -2

Query: 578  FSPSSPY--SPTSPSYSPTSPSYSPT---------------------SPSYSPSSPTYSP 468
            +SP+SP+  SP+SP++SP+SP YSPT                     SP+++P+SP YSP
Sbjct: 1561 YSPTSPFNASPSSPNFSPSSPGYSPTSPMMGGGASPGYAVSPRFSPVSPAFTPTSPAYSP 1620

Query: 467  SSP-YNSGTSPDYSPSSPQFSP----------STGYSPSQPGYSPSST--SQYTPKTNDN 327
            +SP + S TSP YSP+SP +SP          S  YSP+ P YSP+S   S  +P    N
Sbjct: 1621 TSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGN 1680

Query: 326  KDDPGT 309
            K  PG+
Sbjct: 1681 KVSPGS 1686

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 33/58 (56%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            + SP S  SPTSP YSPTSP++SP+SP +  + +SP YSP+SP  S TSP++SP+SP+
Sbjct: 1681 KVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPSYSPTSPNFSPTSPR 1738

[186][TOP]
>UniRef100_C6F1F1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
           RepID=C6F1F1_PLAVI
          Length = 211

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393
           S  YS TSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SPS+   
Sbjct: 53  SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 112

Query: 392 -SPSQPGYSP 366
            +PS P YSP
Sbjct: 113 NNPSSPHYSP 122

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 15/94 (15%)
 Frame = -2

Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
           +SP+SP              +S  SP YS TSP YSPTSP YSP+SP YSP+SP  S TS
Sbjct: 29  YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 88

Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           P YSP+SP++SP S  YSPS P  +  S+  Y+P
Sbjct: 89  PKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 122

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
           ++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP   P++P    +SP YSP   +SP+
Sbjct: 76  KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 129

Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
           FSP S  YS S P Y  S  ++
Sbjct: 130 FSPTSPAYSISSPVYDQSGNAR 151

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 46/99 (46%), Positives = 55/99 (55%), Gaps = 21/99 (21%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 450
           SS  + T   YSPTSP+                    YS TSP YSP+SP YSP+SP  S
Sbjct: 19  SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYS 78

Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
            TSP YSP+SP++SP S  YSP+ P YSPSS     P +
Sbjct: 79  PTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 117

[187][TOP]
>UniRef100_A5K7P4 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
            RepID=A5K7P4_PLAVI
          Length = 2379

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393
            S  YS TSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SPS+   
Sbjct: 2221 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 2280

Query: 392  -SPSQPGYSP 366
             +PS P YSP
Sbjct: 2281 NNPSSPHYSP 2290

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 15/94 (15%)
 Frame = -2

Query: 578  FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
            +SP+SP              +S  SP YS TSP YSPTSP YSP+SP YSP+SP  S TS
Sbjct: 2197 YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 2256

Query: 440  PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            P YSP+SP++SP S  YSPS P  +  S+  Y+P
Sbjct: 2257 PKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 2290

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
            ++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP   P++P    +SP YSP   +SP+
Sbjct: 2244 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 2297

Query: 413  FSP-STGYSPSQPGYSPSSTSQ 351
            FSP S  YS S P Y  S  ++
Sbjct: 2298 FSPTSPAYSISSPVYDQSGNAR 2319

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 50/139 (35%), Positives = 62/139 (44%), Gaps = 59/139 (42%)
 Frame = -2

Query: 575  SPSSPYSPTSPS--YSPT--------SPSYSPTSPS---------------------YSP 489
            SP+  YSP      +SP         SPSYSPTSP+                     YSP
Sbjct: 2140 SPAMLYSPNRALDLFSPKQQTQNNIYSPSYSPTSPTYHLTNPASGGGSSGLNGTKAYYSP 2199

Query: 488  SSPT---------------------------YSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            +SPT                           YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 2200 TSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2259

Query: 392  SPSQPGYSPSSTSQYTPKT 336
            SP+ P YSP+S  QY+P +
Sbjct: 2260 SPTSPKYSPTS-PQYSPSS 2277

[188][TOP]
>UniRef100_UPI000023F34A hypothetical protein FG00916.1 n=1 Tax=Gibberella zeae PH-1
            RepID=UPI000023F34A
          Length = 1758

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 29/121 (23%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSP---SYSPSSPTYSPSSP-------------YN 453
            R+ P+SP +SP+SPS+SPTSP   PTSP   SYSP+SP+YSP+SP             +N
Sbjct: 1601 RYGPTSPSFSPSSPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFN 1660

Query: 452  SGTSPDYSPSSPQFSP------------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
            S TSP YSP+SP +SP            S  YSP+ P +SP+S   Y+P +   +  P T
Sbjct: 1661 SPTSPSYSPASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTT 1720

Query: 308  Q 306
            Q
Sbjct: 1721 Q 1721

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 20/98 (20%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSY-------------SPTSPSYSPSSPTYSPSSPYNSG--- 447
            SP+SP YSPTSPSYSPTSPS              SPTSPSYSP+SP YSP+SP   G   
Sbjct: 1627 SPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPTSPSYSPASPNYSPTSPNVHGAGG 1686

Query: 446  -TSPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 342
             TSP YSP+SP +SP++   YSP+ P +  S T+Q +P
Sbjct: 1687 PTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSP 1724

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 54/100 (54%), Positives = 70/100 (70%), Gaps = 10/100 (10%)
 Frame = -2

Query: 578  FSPSSPY---SPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPD-YSPS 423
            +SP+SP    SPTSPSYSP SP+YSPTSP+      P+SP+YSP+SP  S TSP+ YSP+
Sbjct: 1651 YSPTSPAQFNSPTSPSYSPASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPT 1710

Query: 422  SPQF--SPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
            SP F  SP+T  SP+ P YSP+S + ++P+T      PGT
Sbjct: 1711 SPTFQRSPTTQQSPTSPSYSPTSPA-FSPRT----PGPGT 1745

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 46/113 (40%), Positives = 58/113 (51%), Gaps = 25/113 (22%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPT--YSPSSPYNSG--------TSPDY 432
            F  ++P SP +   +    S SPTSP SYSP+SP   YSP+SP   G        TSP +
Sbjct: 1550 FGGTTPMSPYNRGAASPFSSTSPTSPFSYSPTSPNMGYSPTSPLIDGGGMGRYGPTSPSF 1609

Query: 431  SPSSPQFSP-----------STGYSPSQPGYSPSSTS---QYTPKTNDNKDDP 315
            SPSSP FSP           S  YSP+ P YSP+S S    Y+P +    + P
Sbjct: 1610 SPSSPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSP 1662

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 10/64 (15%)
 Frame = -2

Query: 578  FSPSSP-YSPTSP-SYSPTSPSY--------SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
            +SP+SP +SPTSP +YSPTSP++        SPTSPSYSP+SP +SP +P    +   YS
Sbjct: 1692 YSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSPTSPSYSPTSPAFSPRTPGPGTSGNQYS 1751

Query: 428  PSSP 417
            P+SP
Sbjct: 1752 PNSP 1755

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 10/68 (14%)
 Frame = -2

Query: 572  PSSP-YSPTSPSYSPTSP-SYSPTSPSY--------SPSSPTYSPSSPYNSGTSPDYSPS 423
            P+SP YSP SPS+SPTSP +YSPTSP++        SP+SP+YSP+SP  S  +P    S
Sbjct: 1687 PTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSPTSPSYSPTSPAFSPRTPGPGTS 1746

Query: 422  SPQFSPST 399
              Q+SP++
Sbjct: 1747 GNQYSPNS 1754

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN 453
            SP++  SPTSPSYSPTSP++SP +P    S   YSP+SP N
Sbjct: 1717 SPTTQQSPTSPSYSPTSPAFSPRTPGPGTSGNQYSPNSPSN 1757

[189][TOP]
>UniRef100_C6F0A4 RNA polymerase II (Fragment) n=2 Tax=Plasmodium (Laverania)
           RepID=C6F0A4_PLAFA
          Length = 202

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/76 (61%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP+
Sbjct: 40  YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 99

Query: 401 T--GYSPSQPGYSPSS 360
           +    + + P YSP S
Sbjct: 100 SPVAQNIASPNYSPYS 115

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
           S  YS TSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 37  SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 96

Query: 392 SPSQPGYSPSSTSQYTP 342
           SP+ P     ++  Y+P
Sbjct: 97  SPTSPVAQNIASPNYSP 113

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
           +S Y+  SP YS TSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 30  NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89

Query: 392 SPSQPGYSPSS 360
           SP+ P YSP+S
Sbjct: 90  SPTSPKYSPTS 100

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 48/99 (48%), Positives = 61/99 (61%), Gaps = 20/99 (20%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPS------------------YSPTSPSYSPSSPTYSPSSPY 456
           +SP+SP Y+  +  YSPTSP                   YS TSP YSP+SP YSP+SP 
Sbjct: 1   YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60

Query: 455 NSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            S TSP YSP+SP++SP S  YSP+ P YSP+S  +Y+P
Sbjct: 61  YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 98

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438
           ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP            YS +SP  S TSP
Sbjct: 67  KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 126

Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330
            YS SSP +  S     + P  P Y   S  Q      D
Sbjct: 127 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 165

[190][TOP]
>UniRef100_A7EKT1 DNA-directed RNA polymerase n=2 Tax=Sclerotinia sclerotiorum
            RepID=A7EKT1_SCLS1
          Length = 1746

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 55/103 (53%), Positives = 68/103 (66%), Gaps = 19/103 (18%)
 Frame = -2

Query: 578  FSPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTY-----------SPSSPYNSGTS 441
            +SP+SP    SPTSPSYSPTSPSYSPTSP+YSP+SP Y           SP+SP  S TS
Sbjct: 1644 YSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTS 1703

Query: 440  PDYSPSSPQF---SPSTGYSPSQPGYSPSST--SQYTPKTNDN 327
            P++SPSSPQ    + S  YSP+ P YSP+S   S  +P+  +N
Sbjct: 1704 PNWSPSSPQHQGNNTSPKYSPTSPSYSPTSPNFSPTSPRGGNN 1746

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 16/104 (15%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            +SP+SP   SPTSPSYSPTSP+YSPTSP+   SP+SP+YSP+SP  S TSP+YSP+SP +
Sbjct: 1622 YSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNY 1681

Query: 410  -----SPSTG-------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
                 SP +G       YSP+ P +SPSS     P+   N   P
Sbjct: 1682 AGNKVSPGSGLSPTSPVYSPTSPNWSPSS-----PQHQGNNTSP 1720

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 17/96 (17%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TS 441
            +SP+SP YSPTSP+   SPTSPSYSPTSPSYSP+SP YSP+SP  +G           TS
Sbjct: 1637 YSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTS 1696

Query: 440  PDYSPSSPQFSPSTGY---SPSQPGYSPSSTSQYTP 342
            P YSP+SP +SPS+     + + P YSP+S S Y+P
Sbjct: 1697 PVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPS-YSP 1731

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 53/126 (42%), Positives = 70/126 (55%), Gaps = 36/126 (28%)
 Frame = -2

Query: 578  FSPSSPY--SPTSPSYSPTSPSYSPT---------------------SPSYSPSSPTYSP 468
            +SP+SP+  SPTSP +SP+SP YSPT                     SP+++P+SP YSP
Sbjct: 1565 YSPTSPFNASPTSPQFSPSSPGYSPTSPMMGGGASPGYSVSPRFSPVSPAFTPTSPAYSP 1624

Query: 467  SSP-YNSGTSPDYSPSSPQFSP----------STGYSPSQPGYSPSST--SQYTPKTNDN 327
            +SP + S TSP YSP+SP +SP          S  YSP+ P YSP+S   S  +P    N
Sbjct: 1625 TSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGN 1684

Query: 326  KDDPGT 309
            K  PG+
Sbjct: 1685 KVSPGS 1690

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/58 (56%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            + SP S  SPTSP YSPTSP++SP+SP +  + +SP YSP+SP  S TSP++SP+SP+
Sbjct: 1685 KVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPSYSPTSPNFSPTSPR 1742

[191][TOP]
>UniRef100_P14248 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Plasmodium
            falciparum CDC/Honduras RepID=RPB1_PLAFD
          Length = 2452

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/76 (61%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP+
Sbjct: 2290 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2349

Query: 401  T--GYSPSQPGYSPSS 360
            +    + + P YSP S
Sbjct: 2350 SPVAQNIASPNYSPYS 2365

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            S  YS TSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 2287 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2346

Query: 392  SPSQPGYSPSSTSQYTP 342
            SP+ P     ++  Y+P
Sbjct: 2347 SPTSPVAQNIASPNYSP 2363

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
            +S Y+  SP YS TSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 2280 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2339

Query: 392  SPSQPGYSPSS 360
            SP+ P YSP+S
Sbjct: 2340 SPTSPKYSPTS 2350

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438
            ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP            YS +SP  S TSP
Sbjct: 2317 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 2376

Query: 437  DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330
             YS SSP +  S     + P  P Y   S  Q      D
Sbjct: 2377 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 2415

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 12/91 (13%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDY 432
            +SPS  YSPTSP+Y+  +  YSPTSP            Y+  SP YS +SP  S TSP Y
Sbjct: 2247 YSPS--YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKY 2304

Query: 431  SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP+SP++SP S  YSP+ P YSP+S  +Y+P
Sbjct: 2305 SPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2334

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 47/110 (42%), Positives = 59/110 (53%), Gaps = 33/110 (30%)
 Frame = -2

Query: 572  PSSPYSPTSPSYSPTSPS--------------------------------YSPTSPSYSP 489
            P   ++  SPSYSPTSP+                                YS TSP YSP
Sbjct: 2240 PQINHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSP 2299

Query: 488  SSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            +SP YSP+SP  S TSP YSP+SP++SP S  YSP+ P YSP+S  +Y+P
Sbjct: 2300 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2348

[192][TOP]
>UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Verticillium
            albo-atrum VaMs.102 RepID=C9SR21_9PEZI
          Length = 1756

 Score = 95.5 bits (236), Expect = 3e-18
 Identities = 56/113 (49%), Positives = 70/113 (61%), Gaps = 21/113 (18%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPS---YSPTSPSYSPSSPT----YSPSSP--YNSGTSPDY 432
            +FSPSSP +SPTSP + PTSP+   YSPTSPSYSP+SPT    YSP+SP  +NS TSP Y
Sbjct: 1606 QFSPSSPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSY 1665

Query: 431  SPSSPQFSP-----------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
            SP+SP +SP           S  YSP+ P +SP+S       T+ +   P  Q
Sbjct: 1666 SPASPSYSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHSYSPTSPSFQRPAMQ 1718

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 20/109 (18%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPS---YSPSSPTYSPSSP-------------YNS 450
            R++ S  +SP+SPS+SPTSP + PTSP+   YSP+SP+YSP+SP             +NS
Sbjct: 1600 RYATSPQFSPSSPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNS 1659

Query: 449  GTSPDYSPSSPQFSPST----GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
             TSP YSP+SP +SP++    G  P+ P YSP+S S ++P + ++   P
Sbjct: 1660 PTSPSYSPASPSYSPTSPNLHGAGPTSPSYSPASPS-WSPTSPEHSYSP 1707

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 51/107 (47%), Positives = 64/107 (59%), Gaps = 20/107 (18%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSY-------------SPTSPSYSPSSPTYSPSSPYNSG--- 447
            SP+SP YSPTSPSYSPTSP+              SPTSPSYSP+SP+YSP+SP   G   
Sbjct: 1625 SPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYSPASPSYSPTSPNLHGAGP 1684

Query: 446  TSPDYSPSSPQFSPST---GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            TSP YSP+SP +SP++    YSP+ P +   +  Q     N +   P
Sbjct: 1685 TSPSYSPASPSWSPTSPEHSYSPTSPSFQRPAMQQSPTSPNYSPTSP 1731

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            SP+SP YSP SPSYSPTSP+     PTSPSYSP+SP++SP+SP +S     YSP+SP F 
Sbjct: 1659 SPTSPSYSPASPSYSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHS-----YSPTSPSFQ 1713

Query: 407  -PSTGYSPSQPGYSPSSTSQYTPKT 336
             P+   SP+ P YSP+S S ++P+T
Sbjct: 1714 RPAMQQSPTSPNYSPTSPS-FSPRT 1737

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 42/89 (47%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
 Frame = -2

Query: 581  RFSPSSPY--SPTSPSYS-PTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            R   +SP+  SPTSP  S   +  YSPTSP   YSP+SP     + Y   TSP +SPSSP
Sbjct: 1555 RAGATSPFTTSPTSPFSSFAGAGGYSPTSPGGGYSPTSPLMDGGARY--ATSPQFSPSSP 1612

Query: 416  QFSPSTGY----SPSQPGYSPSSTSQYTP 342
             FSP++      SP+ P YSP+S S Y+P
Sbjct: 1613 SFSPTSPVHRPTSPASPNYSPTSPS-YSP 1640

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 10/55 (18%)
 Frame = -2

Query: 578  FSPSSP-YSPTSP--SYSPTSPSY-------SPTSPSYSPSSPTYSPSSPYNSGT 444
            +SP+SP +SPTSP  SYSPTSPS+       SPTSP+YSP+SP++SP +P  SG+
Sbjct: 1689 YSPASPSWSPTSPEHSYSPTSPSFQRPAMQQSPTSPNYSPTSPSFSPRTPGPSGS 1743

[193][TOP]
>UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
            Pt-1C-BFP RepID=B2W4S0_PYRTR
          Length = 1742

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 8/88 (9%)
 Frame = -2

Query: 581  RFSPSSP---YSPTSPSYSPTSPSY-SPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSP 417
            RF+ +SP    SPTSP YSPTSP Y SPTSPSYSP+SP  YSP+SP  S TSP+YSP+SP
Sbjct: 1595 RFAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSP 1654

Query: 416  QF---SPSTGYSPSQPGYSPSSTSQYTP 342
             F   + S  YSP+ P YSP+S  QY+P
Sbjct: 1655 TFMGGATSPAYSPTSPQYSPTS-PQYSP 1681

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 50/88 (56%), Positives = 61/88 (69%), Gaps = 15/88 (17%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
            +SP+SP  YSPTSP YSPTSP+YSPTSP++    +SP YSP+SP  S TSP YSP+SPQ+
Sbjct: 1627 YSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTSPQY 1686

Query: 410  -------SP----STGYSPSQPGYSPSS 360
                   SP    S  YSP+ P YSP+S
Sbjct: 1687 QATSDRRSPTSPTSPQYSPTSPRYSPTS 1714

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 5/78 (6%)
 Frame = -2

Query: 578  FSPSSPY--SPTSPSYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSG--TSPDYSPSSPQ 414
            +SP+SP   SPTSPSYSPTSP+ YSPTSP YSP+SP YSP+SP   G  TSP YSP+SPQ
Sbjct: 1612 YSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQ 1671

Query: 413  FSPSTGYSPSQPGYSPSS 360
                  YSP+ P YSP+S
Sbjct: 1672 ------YSPTSPQYSPTS 1683

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 55/102 (53%), Positives = 64/102 (62%), Gaps = 25/102 (24%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPS---------YSPTSPSYSPTSPSYSPSSPTY----------SPSS 462
            ++SP+SP YSPTSP+         YSPTSP YSPTSP YSP+SP Y          SP+S
Sbjct: 1641 QYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTSPQYQATSDRRSPTSPTS 1700

Query: 461  PYNSGTSPDYSPSSP--QFSP-STGYSPSQPG--YSPSSTSQ 351
            P  S TSP YSP+SP   FSP S  YSP+ PG  YSP+S  Q
Sbjct: 1701 PQYSPTSPRYSPTSPAGSFSPTSPRYSPTSPGPAYSPTSPKQ 1742

 Score = 79.0 bits (193), Expect = 3e-13
 Identities = 45/87 (51%), Positives = 53/87 (60%), Gaps = 15/87 (17%)
 Frame = -2

Query: 557  SPTSPSYSPTSPSYSPTSPS--------------YSPSSPTYSPSSP-YNSGTSPDYSPS 423
            SP SP +SPTSP YSPTSP                SP+SP YSP+SP Y S TSP YSP+
Sbjct: 1571 SPVSPGFSPTSPGYSPTSPGTASPRFAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSPT 1630

Query: 422  SPQFSPSTGYSPSQPGYSPSSTSQYTP 342
            SP      GYSP+ P YSP+S + Y+P
Sbjct: 1631 SP-----AGYSPTSPQYSPTSPN-YSP 1651

[194][TOP]
>UniRef100_C7YI77 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
            RepID=C7YI77_NECH7
          Length = 1750

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 27/119 (22%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPS---YSPSSPTYSPSSP-------------YNS 450
            R++ S  +SP+SPS+SPTSP   PTSP+   YSPSSP YSP+SP             +NS
Sbjct: 1596 RYATSPSFSPSSPSFSPTSPMVRPTSPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNS 1655

Query: 449  GTSPDYSPSSPQFSP-----------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
             TSP+YSP+SP +SP           S  YSP+ P +SP+S   Y+P T+  +  PG Q
Sbjct: 1656 PTSPNYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSP-TSPYQRSPGAQ 1713

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 50/107 (46%), Positives = 63/107 (58%), Gaps = 22/107 (20%)
 Frame = -2

Query: 578  FSPSSPY---SPTSPSYSPTSPSYSP----------TSPSYSPSSPT--------YSPSS 462
            +SP+SP    SPTSP+YSP SP+YSP          TSPSYSP+SPT        YSP+S
Sbjct: 1645 YSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSPTS 1704

Query: 461  PYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNK 324
            PY        SP+SP +SP S  +SP  PG   SS +QY+P +  N+
Sbjct: 1705 PYQRSPGAQQSPTSPSYSPTSPAFSPRTPG-PGSSGNQYSPNSPSNE 1750

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 49/96 (51%), Positives = 61/96 (63%), Gaps = 12/96 (12%)
 Frame = -2

Query: 578  FSPSSPYSPTSPS-YSPTSPSYS-------PTSPSYSPSSPTYSPSSPY---NSGTSPDY 432
            F P   YSPTSP+ YSPTSP           TSPS+SPSSP++SP+SP     S  SP+Y
Sbjct: 1568 FGPGGGYSPTSPNAYSPTSPLVDGGMGGRYATSPSFSPSSPSFSPTSPMVRPTSPASPNY 1627

Query: 431  SPSSPQFSPSTGYSPSQP-GYSPSSTSQYTPKTNDN 327
            SPSSP +SP+   SPS P  YSP+S +Q+   T+ N
Sbjct: 1628 SPSSPNYSPA---SPSSPRHYSPTSPAQFNSPTSPN 1660

[195][TOP]
>UniRef100_C6F1F6 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
           RepID=C6F1F6_PLAVI
          Length = 211

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/70 (65%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393
           S  YS TSP  SPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SPQ+SPS+   
Sbjct: 53  SPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 112

Query: 392 -SPSQPGYSP 366
            +PS P YSP
Sbjct: 113 NNPSSPHYSP 122

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
 Frame = -2

Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
           +SP+SP              +S  SP YS TSP  SPTSP YSP+SP YSP+SP  S TS
Sbjct: 29  YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTS 88

Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           P YSP+SP++SP S  YSPS P  +  S+  Y+P
Sbjct: 89  PKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 122

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
           ++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP   P++P    +SP YSP   +SP+
Sbjct: 76  KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 129

Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
           FSP S  YS S P Y  S  ++
Sbjct: 130 FSPTSPAYSISSPVYDQSGNAR 151

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 45/99 (45%), Positives = 54/99 (54%), Gaps = 21/99 (21%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 450
           SS  + T   YSPTSP+                    YS TSP  SP+SP YSP+SP  S
Sbjct: 19  SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKXSPTSPKYSPTSPKYS 78

Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
            TSP YSP+SP++SP S  YSP+ P YSPSS     P +
Sbjct: 79  PTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 117

[196][TOP]
>UniRef100_C6F1F5 RNA polymerase II (Fragment) n=1 Tax=Plasmodium fragile
           RepID=C6F1F5_PLAFR
          Length = 210

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 45/70 (64%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393
           S  YS TSP YSPTSP YSPTSP Y P+SP YSP+SP  S TSP YSP+SPQ+SP++   
Sbjct: 53  SPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIP 112

Query: 392 -SPSQPGYSP 366
            +PS P YSP
Sbjct: 113 NNPSSPHYSP 122

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 49/83 (59%), Positives = 61/83 (73%), Gaps = 6/83 (7%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGTSPDYSP---SSP 417
           ++SP+SP Y PTSP YSPTSP YSPTSP YSP+SP YSP+SP  N+ +SP YSP   +SP
Sbjct: 69  KYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSPYAIASP 128

Query: 416 QFSP-STGYSPSQPGYSPSSTSQ 351
           +FSP S  YS S P Y  S+ ++
Sbjct: 129 KFSPTSPAYSISSPVYDRSANAR 151

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
 Frame = -2

Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
           +SP+SP              +S  SP YS TSP YSPTSP YSP+SP Y P+SP  S TS
Sbjct: 29  YSPTSPTNQLGEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTS 88

Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
           P YSP+SP++SP S  YSP+ P  +  S+  Y+P
Sbjct: 89  PKYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSP 122

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 47/117 (40%), Positives = 57/117 (48%), Gaps = 42/117 (35%)
 Frame = -2

Query: 560 YSPTSPS---------------------YSPTSPS--------------------YSPTS 504
           YSPTSP+                     YSPTSP+                    YS TS
Sbjct: 1   YSPTSPTYHLSNNANAGGSAGLNDPKSFYSPTSPTNQLGEMNPNMMKYHSVVSPVYSVTS 60

Query: 503 PSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
           P YSP+SP YSP+SP    TSP YSP+SP++SP S  YSP+ P YSP+S     P +
Sbjct: 61  PKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSS 117

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSP------------------SYSPTSPSYSPSSPTYSPSSP 459
           ++SP+SP YSPTSP YSPTSP                   +SPTSP+YS SSP Y  S+ 
Sbjct: 90  KYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSPYAIASPKFSPTSPAYSISSPVYDRSA- 148

Query: 458 YNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
             +  + +  P SP +      SP Q        S ++P    N D+
Sbjct: 149 --NARNKNQHPLSPAYILQ---SPVQVKQHIQDVSVFSPIQQANADE 190

[197][TOP]
>UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi
            RepID=Q8MX30_NAEGR
          Length = 1590

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 42/59 (71%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SPSSP  YSPTSP+YSP+SP+YSPTSP+YSP+SP YSP+SP  S TSP+YSP+SP +S
Sbjct: 1532 YSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSPNYSPTSPAYS 1590

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 45/75 (60%), Positives = 55/75 (73%), Gaps = 6/75 (8%)
 Frame = -2

Query: 575  SPSSP-----YSPTSP-SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            SP+SP     YSP+SP +YSPTSP+YSP+SP+YSP+SP YSP+SP  S TSP YSP+SP 
Sbjct: 1522 SPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSP- 1580

Query: 413  FSPSTGYSPSQPGYS 369
                  YSP+ P YS
Sbjct: 1581 -----NYSPTSPAYS 1590

 Score = 85.1 bits (209), Expect = 4e-15
 Identities = 47/78 (60%), Positives = 56/78 (71%), Gaps = 5/78 (6%)
 Frame = -2

Query: 578  FSPSSPYSPTSPS----YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            FSP +  SPTSP     YSP+SP +YSPTSP+YSPSSP YSP+SP  S TSP+YSP+SP 
Sbjct: 1516 FSPVAS-SPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSP- 1573

Query: 413  FSPSTGYSPSQPGYSPSS 360
                  YSP+ P YSP+S
Sbjct: 1574 -----AYSPTSPNYSPTS 1586

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 47/85 (55%), Positives = 56/85 (65%), Gaps = 6/85 (7%)
 Frame = -2

Query: 578  FSPSSPYSPTSP-SYSPTSPS----YSPTSP-SYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
            FSPS   S  SP + SPTSP     YSP+SP +YSP+SP YSPSSP  S TSP YSP+SP
Sbjct: 1507 FSPSPYNSAFSPVASSPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSP 1566

Query: 416  QFSPSTGYSPSQPGYSPSSTSQYTP 342
                   YSP+ P YSP+S + Y+P
Sbjct: 1567 N------YSPTSPAYSPTSPN-YSP 1584

[198][TOP]
>UniRef100_C6F0A3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
           RepID=C6F0A3_PLAFA
          Length = 195

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--G 396
           S  YS TSP YSPTSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP++   
Sbjct: 37  SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA 96

Query: 395 YSPSQPGYSPSS 360
            + + P YSP S
Sbjct: 97  QNIASPNYSPYS 108

 Score = 87.8 bits (216), Expect = 6e-16
 Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
           +S Y+  SP YS TSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP S  Y
Sbjct: 30  NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89

Query: 392 SPSQPGYSPSSTSQYTP 342
           SP+ P     ++  Y+P
Sbjct: 90  SPTSPVAQNIASPNYSP 106

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 46/93 (49%), Positives = 57/93 (61%), Gaps = 20/93 (21%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPS------------------YSPTSPSYSPSSPTYSPSSPY 456
           +SP+SP Y+  +  YSPTSP                   YS TSP YSP+SP YSP+SP 
Sbjct: 1   YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60

Query: 455 NSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
            S TSP YSP+SP++SP S  YSP+ P YSP+S
Sbjct: 61  YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 93

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438
           ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP            YS +SP  S TSP
Sbjct: 60  KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 119

Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330
            YS SSP +  S     + P  P Y   S  Q      D
Sbjct: 120 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 158

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 12/85 (14%)
 Frame = -2

Query: 560 YSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
           YSPTSP+Y+  +  YSPTSP            Y+  SP YS +SP  S TSP YSP+SP+
Sbjct: 1   YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60

Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342
           +SP S  YSP+ P YSP+S  +Y+P
Sbjct: 61  YSPTSPKYSPTSPKYSPTS-PKYSP 84

[199][TOP]
>UniRef100_B0DB45 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
            RepID=B0DB45_LACBS
          Length = 1742

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 7/77 (9%)
 Frame = -2

Query: 569  SSPY------SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
            +SPY      +PTSP+YSPTSP+ + TSP YSP+SP YSP+SP  S TSP YSP SP FS
Sbjct: 1586 ASPYYDPSARNPTSPTYSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFS 1645

Query: 407  P-STGYSPSQPGYSPSS 360
            P S  YSP+ P +SP+S
Sbjct: 1646 PTSPRYSPTSPSFSPAS 1662

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/61 (67%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            +SP+SP  + TSP YSPTSP YSPTSPS+SP+SP YSP SP  S TSP YSP+SP FSP+
Sbjct: 1602 YSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPA 1661

Query: 401  T 399
            +
Sbjct: 1662 S 1662

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 32/107 (29%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSP----------------------SYSPTSPSYSPSSPT-- 477
            +SPSSP  YSPTSPS+ P SP                      + +PTSP+YSP+SP   
Sbjct: 1551 YSPSSPNVYSPTSPSFVPQSPFGGATSPFGTSPYAASPYYDPSARNPTSPTYSPTSPALN 1610

Query: 476  -----YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 354
                 YSP+SP  S TSP +SP+SP++SP S  +SP+ P YSP+S S
Sbjct: 1611 LTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPS 1657

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 36/56 (64%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
            +SP+SP YSPTSPS+SPTSP YSP SPS+SP+SP YSP       TSP +SP+SP+
Sbjct: 1616 YSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSP-------TSPSFSPASPR 1664

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
            R+SP+SP +SPTSP YSP SPS+SPTSP YSP+SP++SP+SP     S  Y P
Sbjct: 1622 RYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASPRCKFLSIIYEP 1674

[200][TOP]
>UniRef100_A5DCV1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
           RepID=A5DCV1_PICGU
          Length = 224

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 47/81 (58%), Positives = 56/81 (69%), Gaps = 7/81 (8%)
 Frame = -2

Query: 563 PYSPT---SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
           P+ PT   SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP  S TSP YSP+SP +SP+   
Sbjct: 124 PHHPTHLLSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPNVAQ 183

Query: 392 ----SPSQPGYSPSSTSQYTP 342
                P+   Y PS  +  TP
Sbjct: 184 LLTNFPTVLTYFPSLLTHVTP 204

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 33/39 (84%), Positives = 38/39 (97%), Gaps = 1/39 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS 465
           +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+
Sbjct: 142 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPN 180

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/73 (54%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
 Frame = -2

Query: 551 TSPSYSPT---SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQ 381
           T   + PT   SPSYSPTSPSYSP+SP+YSP       TSP YSP+SP       YSP+ 
Sbjct: 121 THQPHHPTHLLSPSYSPTSPSYSPTSPSYSP-------TSPSYSPTSPS------YSPTS 167

Query: 380 PGYSPSSTSQYTP 342
           P YSP+S S Y+P
Sbjct: 168 PSYSPTSPS-YSP 179

[201][TOP]
>UniRef100_UPI000151A8B4 hypothetical protein PGUG_01106 n=1 Tax=Pichia guilliermondii ATCC
           6260 RepID=UPI000151A8B4
          Length = 224

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 47/81 (58%), Positives = 55/81 (67%), Gaps = 7/81 (8%)
 Frame = -2

Query: 563 PYSPT---SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
           P+ PT   SPSYSPTSPSYSPTSPSYSP+SP YSP+SP  S TSP YSP+SP +SP+   
Sbjct: 124 PHHPTHLLSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPNVAQ 183

Query: 392 ----SPSQPGYSPSSTSQYTP 342
                P+   Y PS  +  TP
Sbjct: 184 LLTNFPTVLTYFPSLLTHVTP 204

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 32/39 (82%), Positives = 37/39 (94%), Gaps = 1/39 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS 465
           +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+
Sbjct: 142 YSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPN 180

[202][TOP]
>UniRef100_C6F0B0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
           RepID=C6F0B0_PLAFA
          Length = 188

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--G 396
           +S Y+  SP YS TSP YSPTSP YSP+SP YSP+SP  S TSP YSP+SP++SP++   
Sbjct: 30  NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA 89

Query: 395 YSPSQPGYSPSS 360
            + + P YSP S
Sbjct: 90  QNIASPNYSPYS 101

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438
           ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP            YS +SP  S TSP
Sbjct: 53  KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 112

Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330
            YS SSP +  S     + P  P Y   S  Q      D
Sbjct: 113 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 151

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 13/86 (15%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSP-----------SYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
           +SP+SP Y+  +  YSPTSP            Y+  SP YS +SP YSP+SP  S TSP 
Sbjct: 1   YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60

Query: 434 YSPSSPQFSP-STGYSPSQPGYSPSS 360
           YSP+SP++SP S  YSP+ P YSP+S
Sbjct: 61  YSPTSPKYSPTSPKYSPTSPKYSPTS 86

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 12/85 (14%)
 Frame = -2

Query: 560 YSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
           YSPTSP+Y+  +  YSPTSP            Y+  SP YS +SP  S TSP YSP+SP+
Sbjct: 1   YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60

Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342
           +SP S  YSP+ P YSP+S  +Y+P
Sbjct: 61  YSPTSPKYSPTSPKYSPTS-PKYSP 84

[203][TOP]
>UniRef100_A8N128 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
            RepID=A8N128_COPC7
          Length = 1642

 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 5/79 (6%)
 Frame = -2

Query: 581  RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSP-YNSGTSPDYSPSSPQFS 408
            R + S  YSPTSP    TSP+YSPTSP +SP+SP  YSP SP + S  SP+YSP+SP +S
Sbjct: 1540 RQATSPTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSPASPSYS 1599

Query: 407  P---STGYSPSQPGYSPSS 360
            P   S  YSPS P +SP+S
Sbjct: 1600 PAPASPNYSPSSPTWSPTS 1618

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 47/107 (43%), Positives = 61/107 (57%), Gaps = 17/107 (15%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTSPSYSPTSP-----SYSP--------SSPTYSPSSPYNSGT 444
            +SPSSP  YSPTSP   P SP  +PTSP     + SP        +SPTYSP+SP    T
Sbjct: 1498 YSPSSPNAYSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRRQATSPTYSPTSPIAGLT 1557

Query: 443  SPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
            SP YSP+SP FSP++  GYSP  P +   ++  Y+P +      P +
Sbjct: 1558 SPAYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSPASPSYSPAPAS 1604

 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 5/70 (7%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSY-SPTSPSYSPTSPSYSPS--SPTYSPSSPYNSGTSPDYSPSSPQ 414
            FSP+SP  YSP SP++ SP SP+YSP SPSYSP+  SP YSPSSP  S TSP +  + P 
Sbjct: 1568 FSPTSPNGYSPQSPNFGSPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSPAHDQNGPT 1627

Query: 413  FSPSTGYSPS 384
             + S+ Y  S
Sbjct: 1628 NNRSSAYQQS 1637

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 19/98 (19%)
 Frame = -2

Query: 572  PSSPYSP----TSPSYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNS-------------G 447
            P SP+        P YSP+SP+ YSPTSP   P SP  +P+SP+++              
Sbjct: 1483 PQSPHGAGGMSPGPGYSPSSPNAYSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRRQA 1542

Query: 446  TSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQYTPKT 336
            TSP YSP+SP     S  YSP+ PG+SP+S + Y+P++
Sbjct: 1543 TSPTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSPQS 1580

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSP-DYSPS 423
            SP+SP YSP SPSYSP   SP+YSP+SP++SP+SP +  + P N+ +S    SPS
Sbjct: 1585 SPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSPAHDQNGPTNNRSSAYQQSPS 1639

[204][TOP]
>UniRef100_Q9FI54 Genomic DNA, chromosome 5, TAC clone:K3K7 n=1 Tax=Arabidopsis
           thaliana RepID=Q9FI54_ARATH
          Length = 314

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 48/104 (46%), Positives = 54/104 (51%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYS 390
           S  YSPTSPSYSPTSPSY P S S SP S +YSP SP +S  SP YSP+S   SP     
Sbjct: 110 SPTYSPTSPSYSPTSPSYRPNSSSDSPDSHSYSPVSPDHSLVSPQYSPTSTHHSPILSSP 169

Query: 389 PSQPGYSPSSTSQYTPKTNDNKDDPGTQ*ARLICLRDGSDCADG 258
           P   GY P        KT+  K+           + DGS   DG
Sbjct: 170 PEDYGYGPDDIEAGKMKTDQLKE-----------IGDGSSHVDG 202

[205][TOP]
>UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii
            RepID=B9PMD7_TOXGO
          Length = 1892

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 10/88 (11%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSG---TSPDYSPSSPQFS 408
            +P+SP SP SP+YSPTSP YSPTSP YSP+   YSP SP Y +G    SP ++  SP++S
Sbjct: 1750 NPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYS 1809

Query: 407  PST--GYSPSQP----GYSPSSTSQYTP 342
            PS+   YSP+ P      SPS    + P
Sbjct: 1810 PSSPAAYSPTSPMPNVAGSPSYEDSHAP 1837

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 44/91 (48%), Positives = 53/91 (58%), Gaps = 13/91 (14%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSP--SYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSS 420
            +P SP+   S SYSPTSP    +PTSP+      YSP+SP YSP+SP  S T   YSP S
Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQS 1787

Query: 419  PQFSPSTG-YSPS----QPGYSPSSTSQYTP 342
            P +    G  SPS     P YSPSS + Y+P
Sbjct: 1788 PSYGAGQGPLSPSFTVQSPRYSPSSPAAYSP 1818

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 50/112 (44%), Positives = 59/112 (52%), Gaps = 37/112 (33%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTS-----------------------PSYSPTSP------SYS 492
            +SPSSP  YSPTSP+YSPTS                       PS +P SP      SYS
Sbjct: 1682 YSPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPMSPHFSASTSYS 1741

Query: 491  PSSPTY-----SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 354
            P+SP       SP+SPY    SP YSP+SP++SP S  YSP+   YSP S S
Sbjct: 1742 PTSPVQQSNPTSPTSPY----SPAYSPTSPRYSPTSPMYSPTFAPYSPQSPS 1789

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 43/90 (47%), Positives = 52/90 (57%), Gaps = 15/90 (16%)
 Frame = -2

Query: 566  SPYSPT-SPSYSPTSP-SYSPTSPSYSPSSPTY-------------SPSSPYNSGTSPDY 432
            SP SPT SPSYSP+SP SYSPTSP+YSP+S                +P SP+    SP  
Sbjct: 1672 SPTSPTLSPSYSPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPF----SPSN 1727

Query: 431  SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
            +P SP FS ST YSP+ P    + TS  +P
Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSP 1757

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 46/103 (44%), Positives = 60/103 (58%), Gaps = 24/103 (23%)
 Frame = -2

Query: 578  FSPSSP-----YSPTSP-SYSPTSPSYSPTSP----------------SYSPSSPTYSPS 465
            +SP+SP     YSP+SP SYSPTSP+YSPTS                   SP SP+ +P 
Sbjct: 1671 YSPTSPTLSPSYSPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPM 1730

Query: 464  SPYNSGTSPDYSPSSP--QFSPSTGYSPSQPGYSPSSTSQYTP 342
            SP+ S  S  YSP+SP  Q +P++  SP  P YSP+S  +Y+P
Sbjct: 1731 SPHFS-ASTSYSPTSPVQQSNPTSPTSPYSPAYSPTS-PRYSP 1771

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 41/108 (37%), Positives = 50/108 (46%), Gaps = 35/108 (32%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSP----SYSPSSPTYSPSSPYNS------------- 450
            FSP +P SP SPS  P    +SPTSP    +   SSP+YSPSSP ++             
Sbjct: 1595 FSPRNPLSPLSPS-GPPGGVFSPTSPILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDM 1653

Query: 449  ------------GTSPDYSPSSPQFSPS------TGYSPSQPGYSPSS 360
                        G    YSP+SP  SPS        YSP+ P YSP+S
Sbjct: 1654 VISPGGVGSDGRGRGGSYSPTSPTLSPSYSPSSPPSYSPTSPAYSPTS 1701

[206][TOP]
>UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
            RepID=B6KEC6_TOXGO
          Length = 1892

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 10/88 (11%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSG---TSPDYSPSSPQFS 408
            +P+SP SP SP+YSPTSP YSPTSP YSP+   YSP SP Y +G    SP ++  SP++S
Sbjct: 1750 NPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYS 1809

Query: 407  PST--GYSPSQP----GYSPSSTSQYTP 342
            PS+   YSP+ P      SPS    + P
Sbjct: 1810 PSSPAAYSPTSPMPNVAGSPSYEDSHAP 1837

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 44/91 (48%), Positives = 53/91 (58%), Gaps = 13/91 (14%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSP--SYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSS 420
            +P SP+   S SYSPTSP    +PTSP+      YSP+SP YSP+SP  S T   YSP S
Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQS 1787

Query: 419  PQFSPSTG-YSPS----QPGYSPSSTSQYTP 342
            P +    G  SPS     P YSPSS + Y+P
Sbjct: 1788 PSYGAGQGPLSPSFTVQSPRYSPSSPAAYSP 1818

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 49/112 (43%), Positives = 59/112 (52%), Gaps = 37/112 (33%)
 Frame = -2

Query: 578  FSPSSP--YSPTSPSYSPTS-----------------------PSYSPTSP------SYS 492
            +SPS+P  YSPTSP+YSPTS                       PS +P SP      SYS
Sbjct: 1682 YSPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPMSPHFSASTSYS 1741

Query: 491  PSSPTY-----SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 354
            P+SP       SP+SPY    SP YSP+SP++SP S  YSP+   YSP S S
Sbjct: 1742 PTSPVQQSNPTSPTSPY----SPAYSPTSPRYSPTSPMYSPTFAPYSPQSPS 1789

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 42/90 (46%), Positives = 52/90 (57%), Gaps = 15/90 (16%)
 Frame = -2

Query: 566  SPYSPT-SPSYSPTSP-SYSPTSPSYSPSSPTY-------------SPSSPYNSGTSPDY 432
            SP SPT SPSYSP++P SYSPTSP+YSP+S                +P SP+    SP  
Sbjct: 1672 SPTSPTLSPSYSPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPF----SPSN 1727

Query: 431  SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
            +P SP FS ST YSP+ P    + TS  +P
Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSP 1757

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 24/103 (23%)
 Frame = -2

Query: 578  FSPSSP-----YSPTSP-SYSPTSPSYSPTSP----------------SYSPSSPTYSPS 465
            +SP+SP     YSP++P SYSPTSP+YSPTS                   SP SP+ +P 
Sbjct: 1671 YSPTSPTLSPSYSPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPM 1730

Query: 464  SPYNSGTSPDYSPSSP--QFSPSTGYSPSQPGYSPSSTSQYTP 342
            SP+ S  S  YSP+SP  Q +P++  SP  P YSP+S  +Y+P
Sbjct: 1731 SPHFS-ASTSYSPTSPVQQSNPTSPTSPYSPAYSPTS-PRYSP 1771

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 41/108 (37%), Positives = 50/108 (46%), Gaps = 35/108 (32%)
 Frame = -2

Query: 578  FSPSSPYSPTSPSYSPTSPSYSPTSP----SYSPSSPTYSPSSPYNS------------- 450
            FSP +P SP SPS  P    +SPTSP    +   SSP+YSPSSP ++             
Sbjct: 1595 FSPRNPLSPLSPS-GPPGGVFSPTSPILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDM 1653

Query: 449  ------------GTSPDYSPSSPQFSPS------TGYSPSQPGYSPSS 360
                        G    YSP+SP  SPS        YSP+ P YSP+S
Sbjct: 1654 VISPGGVGSDGRGRGGSYSPTSPTLSPSYSPSAPPSYSPTSPAYSPTS 1701

[207][TOP]
>UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma
            polyspora DSM 70294 RepID=A7TTU2_VANPO
          Length = 1311

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 39/68 (57%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
 Frame = -2

Query: 575  SPSSPY--SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
            SPSSP     +SP +SPTSP+YSPTSPSYSP+SP+YSP+S   S TS  YSP+SP +S +
Sbjct: 1211 SPSSPGFGGVSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSTSYSQTSSSYSPTSPSYSQN 1270

Query: 401  TGYSPSQP 378
              ++P  P
Sbjct: 1271 LHHTPKIP 1278

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
 Frame = -2

Query: 575  SPSSPY--SPTSPSYSP-TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS- 408
            SP + Y  SP+SP +   +SP +SPTSP        YSP+SP  S TSP YSP+S  +S 
Sbjct: 1203 SPFTAYGESPSSPGFGGVSSPGFSPTSP-------AYSPTSPSYSPTSPSYSPTSTSYSQ 1255

Query: 407  PSTGYSPSQPGYSPSSTSQYTPK 339
             S+ YSP+ P Y  S    +TPK
Sbjct: 1256 TSSSYSPTSPSY--SQNLHHTPK 1276

[208][TOP]
>UniRef100_UPI0000F3065A UPI0000F3065A related cluster n=1 Tax=Bos taurus
           RepID=UPI0000F3065A
          Length = 540

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           F P SP + P SP + P SP +   SP + P SP ++P SP +   SPD+ P SP++ P 
Sbjct: 65  FGPQSPEFEPQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSPRYEPQ 124

Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
           S GY P  PGY P S    T        +P
Sbjct: 125 SPGYEPKSPGYEPRSPGYGTQSPEYEPQNP 154

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 15/81 (18%)
 Frame = -2

Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399
           P SP + P SP + P SP + P SP     SP + P SP+F+P               S 
Sbjct: 60  PQSPGFGPQSPEFEPQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSP 119

Query: 398 GYSPSQPGYSPSSTSQYTPKT 336
            Y P  PGY P S   Y P++
Sbjct: 120 RYEPQSPGYEPKSPG-YEPRS 139

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 26/75 (34%), Positives = 36/75 (48%)
 Frame = -2

Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
           PS  ++P SP     SP + P SP Y P SP Y P SP     SP Y   SP++ P    
Sbjct: 96  PSPEFAPRSPESDSQSPDFEPQSPRYEPQSPGYEPKSPGYEPRSPGYGTQSPEYEPQNPE 155

Query: 392 SPSQPGYSPSSTSQY 348
             +Q     + +S++
Sbjct: 156 FKTQSPEFEAESSKF 170

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 24/55 (43%), Positives = 29/55 (52%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
           S S  + P SP Y P SP Y P SP Y P SP Y   SP     +P++   SP+F
Sbjct: 109 SQSPDFEPQSPRYEPQSPGYEPKSPGYEPRSPGYGTQSPEYEPQNPEFKTQSPEF 163

[209][TOP]
>UniRef100_UPI00004C0623 PREDICTED: similar to zinc finger protein 239 (predicted) isoform 1
           n=1 Tax=Canis lupus familiaris RepID=UPI00004C0623
          Length = 554

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           F P SP +   SP + P SP +   SP + P SP ++P SP +   SP++ P SP++ P 
Sbjct: 65  FEPQSPGFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQ 124

Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
           S GY P  PGY P S   Y PK+
Sbjct: 125 SPGYEPRSPGYEPKSPG-YEPKS 146

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 38/95 (40%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
 Frame = -2

Query: 581 RFSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
           RF P SP        + P SP ++P SP     SP + P SP Y P SP     SP Y P
Sbjct: 78  RFEPESPGFESRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEP 137

Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNK 324
            SP + P S GY P  PGY  S +  Y P+  + K
Sbjct: 138 KSPGYEPKSPGYEPRSPGYE-SQSPGYEPQNPEFK 171

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 31/72 (43%), Positives = 33/72 (45%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           S S  + P SP Y P SP Y P SP Y P SP Y P SP     SP Y   SP      G
Sbjct: 109 SQSPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSP------G 162

Query: 395 YSPSQPGYSPSS 360
           Y P  P +   S
Sbjct: 163 YEPQNPEFKTQS 174

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
           R+ P SP Y P SP Y P SP Y P SP Y P SP Y   SP     +P++   SP+F
Sbjct: 120 RYEPQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSPGYEPQNPEFKTQSPEF 177

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
           + P SP Y P SP Y P SP Y P SP Y   SP Y P +P     SP++   S +F
Sbjct: 128 YEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSPGYEPQNPEFKTQSPEFEAQSSKF 184

[210][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
            uvarioides RepID=Q9AXN1_9FLOR
          Length = 1712

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 19/95 (20%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSP--------------SYSPTSPSY-SPSSPTYSPSSPYNSGTS 441
            SP + YSPTSP+++PTSP              +YSPT PSY + +SP Y     Y+ G+ 
Sbjct: 1598 SPGAQYSPTSPAFTPTSPGYSSATGPGRPGTGAYSPTGPSYNAAASPGYQSGINYSPGSP 1657

Query: 440  PDYSPSSPQFSPST----GYSPSQPGYSPSSTSQY 348
              YSP+SP F+P +    GYSPS P Y+P  ++ Y
Sbjct: 1658 HTYSPNSPVFTPRSPAAHGYSPSTPQYNPQGSNPY 1692

[211][TOP]
>UniRef100_A9SW33 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9SW33_PHYPA
          Length = 284

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 42/77 (54%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS-------SPQF 411
           S PYSP+    SP SP+YSP+    SP SPTYSPS  Y S  SP YSPS       SP +
Sbjct: 158 SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTY 217

Query: 410 SPSTGY-SPSQPGYSPS 363
           SPS  Y SP  P YSPS
Sbjct: 218 SPSPVYKSPPSPSYSPS 234

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 42/84 (50%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS-------SPQF 411
           S PY+  SP Y   SP YSP+    SP SPTYSPS  Y S  SP YSPS       SP +
Sbjct: 146 SPPYASPSPVYE--SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTY 203

Query: 410 SPSTGY-SPSQPGYSPSSTSQYTP 342
           SPS  Y SP  P YSPS   +  P
Sbjct: 204 SPSPVYKSPPSPTYSPSPVYKSPP 227

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 41/85 (48%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
 Frame = -2

Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS-------SPQ 414
           PS P  P SP Y   SP Y+  SP Y   SP YSPS  Y S  SP YSPS       SP 
Sbjct: 133 PSCPPPPESPVYE--SPPYASPSPVYE--SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPT 188

Query: 413 FSPSTGY-SPSQPGYSPSSTSQYTP 342
           +SPS  Y SP  P YSPS   +  P
Sbjct: 189 YSPSPVYKSPPSPTYSPSPVYKSPP 213

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 34/60 (56%), Positives = 38/60 (63%), Gaps = 8/60 (13%)
 Frame = -2

Query: 578 FSPSSPY-SPTSPSYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGTSPDYSPS 423
           +SPS  Y SP SP+YSP+    SP SP+YSPS       SPTYSPS  Y S  SP YSPS
Sbjct: 175 YSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPSYSPS 234

[212][TOP]
>UniRef100_Q4UCP5 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
            RepID=Q4UCP5_THEAN
          Length = 1678

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 17/97 (17%)
 Frame = -2

Query: 575  SPSSPYSPTS-------PSYSPTSP--------SYSPTSPSYSPSSPTYSPSSPYN--SG 447
            SP+SP SPTS       P+YSPTSP        + SPTSP YSP+   YSP+SP +  S 
Sbjct: 1556 SPTSPMSPTSAISPVYSPAYSPTSPMSPTSPTSALSPTSPVYSPA---YSPTSPTSAMSP 1612

Query: 446  TSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKT 336
            TSP YSP+    SP+ GY+P+ P YSP+    Y+P T
Sbjct: 1613 TSPVYSPAYSPTSPNLGYAPTSPVYSPA----YSPTT 1645

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 46/89 (51%), Positives = 60/89 (67%), Gaps = 10/89 (11%)
 Frame = -2

Query: 578  FSPSSPYSPTSP--SYSPT----SPSYSPTSP--SYSPSSPTYSPSSPYNSGTSPD--YS 429
            +SP+SP SPTSP  + SPT    SP+YSPTSP  + SP+SP YSP+    S TSP+  Y+
Sbjct: 1575 YSPTSPMSPTSPTSALSPTSPVYSPAYSPTSPTSAMSPTSPVYSPA---YSPTSPNLGYA 1631

Query: 428  PSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
            P+SP +SP+  YSP+ P Y  S TS  +P
Sbjct: 1632 PTSPVYSPA--YSPTTPNYGYSPTSPLSP 1658

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 11/96 (11%)
 Frame = -2

Query: 575  SPSSP-----YSPTSPS--YSPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPS 423
            SP+SP     YSPTSP+   SPTSP Y   SP+YSP+SP   Y+P+SP     SP YSP+
Sbjct: 1591 SPTSPVYSPAYSPTSPTSAMSPTSPVY---SPAYSPTSPNLGYAPTSPV---YSPAYSPT 1644

Query: 422  SPQ--FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKD 321
            +P   +SP++  SP+ P YSP  T  ++P   ++ D
Sbjct: 1645 TPNYGYSPTSPLSPTSPAYSP--TDPFSPNPFEDID 1678

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 42/81 (51%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD--YSPSSPQFSPS 402
            SP+SP SPTSP  SPTSP  SPTS      SP YSP+SP  S TSP    SP+SP +SP+
Sbjct: 1544 SPTSPMSPTSPM-SPTSPM-SPTSAISPVYSPAYSPTSPM-SPTSPTSALSPTSPVYSPA 1600

Query: 401  TGYSPSQPGYSPSS-TSQYTP 342
                     YSP+S TS  +P
Sbjct: 1601 ---------YSPTSPTSAMSP 1612

[213][TOP]
>UniRef100_UPI0001792AA2 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum
           RepID=UPI0001792AA2
          Length = 649

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +  SSP Y  +SPSY  +SPSY  +SPSY  SS +Y  SSP   G+SP Y  SSP +  S
Sbjct: 460 YGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSS 519

Query: 401 TGYSPSQPGYSPSSTSQYTP 342
           + Y+ + P YS SS+S  +P
Sbjct: 520 SLYAGNSPSYSGSSSSYGSP 539

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GY 393
           SS Y  +SPSY  +SPSY  +SPSY  SSP+Y  +SP   G+S  Y  SSP +  S+  Y
Sbjct: 380 SSSYGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSY 439

Query: 392 SPSQPGYSPSSTS 354
             S P Y  SS S
Sbjct: 440 GGSSPSYGGSSHS 452

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 35/73 (47%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPSTGY 393
           S  Y  +SPSY  +S SY  +SPSY  SSP+Y  SSP   G+SP Y  SSP +   S+ Y
Sbjct: 436 SHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSY 495

Query: 392 SPSQPGYSPSSTS 354
             S P Y  SS S
Sbjct: 496 GGSSPSYGGSSPS 508

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GY 393
           SS Y  +S SY  +S SY  +SPSY  SSP+Y  SSP   G+SP Y  +SP +  S+  Y
Sbjct: 366 SSSYGGSSSSYGGSSSSYGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSY 425

Query: 392 SPSQPGYSPSSTS 354
             S P Y  SS S
Sbjct: 426 GGSSPSYGGSSHS 438

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GY 393
           S  Y  +SPSY  +S SY  +SPSY  SS +Y  SSP   G+SP Y  SSP +  S+  Y
Sbjct: 422 SHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSY 481

Query: 392 SPSQPGYSPSSTS 354
             S P Y  SS+S
Sbjct: 482 GGSSPSYGGSSSS 494

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 37/79 (46%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +  SSP Y  +S SY  +SPSY  +SPSY  SSP+Y  SS Y +G SP YS SS  +   
Sbjct: 481 YGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSSSLY-AGNSPSYSGSSSSYGSP 539

Query: 401 TGYSPSQPGYSP-SSTSQY 348
           + Y PS    SP  S+S Y
Sbjct: 540 SPYKPSYGSPSPYKSSSSY 558

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 37/82 (45%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF---SP 405
           S S  Y  +SPSY  +SPSY  +SPSY  +SP+Y  SS    G+SP Y  SS  +   SP
Sbjct: 385 SSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSP 444

Query: 404 STG-----YSPSQPGYSPSSTS 354
           S G     Y  S P Y  SS S
Sbjct: 445 SYGGSSHSYGGSSPSYGGSSPS 466

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--- 399
           S  Y  +S SY  +SPSY  +S SY  SSP+Y  SS    G+SP Y  SSP +  S+   
Sbjct: 415 SPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSY 474

Query: 398 -GYSPSQPGYSPS---STSQY 348
            G SPS  G SPS   S+S Y
Sbjct: 475 GGSSPSYGGSSPSYGGSSSSY 495

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 38/77 (49%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411
           +  SSP Y   SPSY  +S SY  +SPSY  SS +Y  SSP   G+S  Y  SSP +   
Sbjct: 404 YGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGS 463

Query: 410 SPS-TGYSPSQPGYSPS 363
           SPS  G SPS  G SPS
Sbjct: 464 SPSYGGSSPSYGGSSPS 480

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 34/71 (47%), Positives = 40/71 (56%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP   YS +SPS+   S SY  +S SY  SS +Y  SSP   G+SP Y  SSP +    G
Sbjct: 351 SPPQKYS-SSPSFGGGSSSYGGSSSSYGGSSSSYGSSSPSYGGSSPSYGGSSPSYG---G 406

Query: 395 YSPSQPGYSPS 363
            SPS  G SPS
Sbjct: 407 SSPSYGGNSPS 417

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 38/94 (40%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
 Frame = -2

Query: 578 FSPSSPYSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSS---PYNSGTSPDYSPSSP 417
           +  SS Y+  SPSYS +S SY   SP  PSY   SP  S SS   PY+S      SPSS 
Sbjct: 516 YGSSSLYAGNSPSYSGSSSSYGSPSPYKPSYGSPSPYKSSSSYKAPYSSSGPSFESPSSY 575

Query: 416 QFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
           + SP +G S  +   SP   S Y   ++  K  P
Sbjct: 576 KLSPYSGGSSYEGSSSPYKYSSYEGSSSSYKSSP 609

[214][TOP]
>UniRef100_UPI0000E241DC PREDICTED: hypothetical protein n=1 Tax=Pan troglodytes
           RepID=UPI0000E241DC
          Length = 1156

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           F P SP + P SP + P SP +   SP   P SP ++P SP +   SP++   SP++ P 
Sbjct: 674 FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 733

Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
           S GY P  PGY P S   Y P++
Sbjct: 734 SPGYEPRSPGYEPRSPG-YEPRS 755

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           RF P SP +   SP   P SP ++P SP     SP +   SP     SP Y P SP + P
Sbjct: 687 RFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEP 746

Query: 404 -STGYSPSQPGYSPSSTSQYTPKTNDNK 324
            S GY P  PGY  S +S+Y  +  + K
Sbjct: 747 RSPGYEPRSPGYE-SESSRYESQNTELK 773

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
 Frame = -2

Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399
           P SP + P SP + P SP + P SP     SP   P SP+F+P               S 
Sbjct: 669 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 728

Query: 398 GYSPSQPGYSPSSTSQYTPKT 336
            Y P  PGY P S   Y P++
Sbjct: 729 RYEPQSPGYEPRSPG-YEPRS 748

[215][TOP]
>UniRef100_Q01K81 H0525C06.3 protein n=2 Tax=Oryza sativa RepID=Q01K81_ORYSA
          Length = 350

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 15/95 (15%)
 Frame = -2

Query: 575 SPSSPYSPT----SPSYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGTSPDYS 429
           +PS P+SP+    SP YSP++P     SP YSPS       SP Y+PS+P+    SPDY+
Sbjct: 162 APSPPWSPSRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYA 221

Query: 428 PSSPQFSP----STGYSPSQPGYSPSSTSQYTPKT 336
           PS+P   P    S  YSPS P    +S + YTP T
Sbjct: 222 PSTPWSPPRRASSPDYSPSTPPRRAASPN-YTPST 255

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 12/83 (14%)
 Frame = -2

Query: 578 FSPSSPYSP----TSPSYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGTSPDY 432
           ++PS+P+SP    +SP YSP++P     SP+Y+PS       SP YSPSSP     SP+Y
Sbjct: 220 YAPSTPWSPPRRASSPDYSPSTPPRRAASPNYTPSTPPRRAASPDYSPSSPPRRAASPEY 279

Query: 431 SP-SSPQFSPSTGYSPSQPGYSP 366
           +  S P+ + S  Y+PS P  SP
Sbjct: 280 TQLSPPRRAASPDYNPSTPPPSP 302

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 19/92 (20%)
 Frame = -2

Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN---SGTSPDY 432
           +SPS+P        YSP++P     SP Y+P++P    +SP Y+PS+P++     +SPDY
Sbjct: 178 YSPSTPPRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYAPSTPWSPPRRASSPDY 237

Query: 431 SPSS-PQFSPSTGYSPS-------QPGYSPSS 360
           SPS+ P+ + S  Y+PS        P YSPSS
Sbjct: 238 SPSTPPRRAASPNYTPSTPPRRAASPDYSPSS 269

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
 Frame = -2

Query: 578 FSPSSP--------YSPTSPSYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
           ++PS+P        Y+P++P   P   +SP YSP++P    +SP Y+PS+P     SPDY
Sbjct: 206 YTPSTPWRRAASPDYAPSTPWSPPRRASSPDYSPSTPPRRAASPNYTPSTPPRRAASPDY 265

Query: 431 SPSSPQFSPSTGYSPSQPGYSP---SSTSQYTPKT 336
           SPSSP   P    SP     SP   +++  Y P T
Sbjct: 266 SPSSP---PRRAASPEYTQLSPPRRAASPDYNPST 297

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 16/106 (15%)
 Frame = -2

Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSP---SSPTYSPSSPYNSGTSPDY 432
           +SPS+P        Y+P++P     SP Y+P++P   P   SSP YSPS+P     SP+Y
Sbjct: 192 YSPSTPPRRAASPDYTPSTPWRRAASPDYAPSTPWSPPRRASSPDYSPSTPPRRAASPNY 251

Query: 431 SPSS-PQFSPSTGYSPSQP---GYSPSSTSQYTPKTNDNKD-DPGT 309
           +PS+ P+ + S  YSPS P     SP  T    P+   + D +P T
Sbjct: 252 TPSTPPRRAASPDYSPSSPPRRAASPEYTQLSPPRRAASPDYNPST 297

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 17/90 (18%)
 Frame = -2

Query: 554 PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS----------SPQFSP 405
           P  P  +  SP Y+P++P    +SP Y+PS+P+    SPD++PS          SP +SP
Sbjct: 121 PPPPPRTAASPEYTPSTPWRRAASPDYTPSTPWRRAASPDHAPSPPWSPSRRAASPDYSP 180

Query: 404 ST-GYSPSQPGYSPS------STSQYTPKT 336
           ST     + P YSPS      ++  YTP T
Sbjct: 181 STPPRRAASPDYSPSTPPRRAASPDYTPST 210

[216][TOP]
>UniRef100_Q4N0F9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
            RepID=Q4N0F9_THEPA
          Length = 1681

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 44/88 (50%), Positives = 54/88 (61%), Gaps = 17/88 (19%)
 Frame = -2

Query: 575  SPSSPYSPTS-------PSYSPTSP--------SYSPTSPSYSPSSPTYSPSSPYN--SG 447
            SP SP SPTS       P+YSPTSP        + SPTSP YSP+   YSP+SP +  S 
Sbjct: 1559 SPMSPMSPTSAMSPVYSPAYSPTSPMSPTSPANALSPTSPVYSPA---YSPTSPTSAMSP 1615

Query: 446  TSPDYSPSSPQFSPSTGYSPSQPGYSPS 363
            TSP YSP+    SP+ GY+P+ P YSP+
Sbjct: 1616 TSPVYSPAYSPTSPNLGYAPTSPVYSPA 1643

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 20/99 (20%)
 Frame = -2

Query: 578  FSPSSPYSPTSPS--YSPTSP----SYSPTSPS--YSPSSPTYSPS----------SPYN 453
            +SP+SP SPTSP+   SPTSP    +YSPTSP+   SP+SP YSP+          +P +
Sbjct: 1578 YSPTSPMSPTSPANALSPTSPVYSPAYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTS 1637

Query: 452  SGTSPDYSPSSPQF--SPSTGYSPSQPGYSPSSTSQYTP 342
               SP YSP+SP +  SP++  SP+ P YSP  T  ++P
Sbjct: 1638 PVYSPAYSPTSPNYGYSPTSPLSPTSPAYSP--TDPFSP 1674

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 13/85 (15%)
 Frame = -2

Query: 578  FSPSSPYSPTSPS--YSPTSP--SYSPT-------SPSYSPSSPTYSPSSPYN--SGTSP 438
            FSP+SP SP SP+   SPTSP    SPT       SP+YSP+SP  SP+SP N  S TSP
Sbjct: 1540 FSPTSPTSPMSPTSPMSPTSPMSPMSPTSAMSPVYSPAYSPTSP-MSPTSPANALSPTSP 1598

Query: 437  DYSPSSPQFSPSTGYSPSQPGYSPS 363
             YSP+    SP++  SP+ P YSP+
Sbjct: 1599 VYSPAYSPTSPTSAMSPTSPVYSPA 1623

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 9/67 (13%)
 Frame = -2

Query: 575  SPSSP-----YSPTSPS--YSPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPS 423
            SP+SP     YSPTSP+  Y+PTSP Y   SP+YSP+SP   YSP+SP  S TSP YSP+
Sbjct: 1614 SPTSPVYSPAYSPTSPNLGYAPTSPVY---SPAYSPTSPNYGYSPTSPL-SPTSPAYSPT 1669

Query: 422  SPQFSPS 402
             P FSP+
Sbjct: 1670 DP-FSPN 1675

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 43/82 (52%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
 Frame = -2

Query: 566  SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--SPSTGY 393
            SP SPTSP  SPTSP  SPTSP  SP SPT + S  Y    SP YSP+SP    SP+   
Sbjct: 1541 SPTSPTSPM-SPTSPM-SPTSPM-SPMSPTSAMSPVY----SPAYSPTSPMSPTSPANAL 1593

Query: 392  SPSQP----GYSPSS-TSQYTP 342
            SP+ P     YSP+S TS  +P
Sbjct: 1594 SPTSPVYSPAYSPTSPTSAMSP 1615

[217][TOP]
>UniRef100_B7Z2Y7 cDNA FLJ59521, moderately similar to Zinc finger and SCAN
           domain-containing protein 2 n=1 Tax=Homo sapiens
           RepID=B7Z2Y7_HUMAN
          Length = 453

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           F P SP + P SP + P SP +   SP   P SP ++P SP +   SP++   SP++ P 
Sbjct: 34  FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 93

Query: 404 STGYSPSQPGYSPSS 360
           S GY P  PGY P S
Sbjct: 94  SPGYEPRSPGYEPRS 108

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
 Frame = -2

Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399
           P SP + P SP + P SP + P SP     SP   P SP+F+P               S 
Sbjct: 29  PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 88

Query: 398 GYSPSQPGYSPSSTSQYTPKT 336
            Y P  PGY P S   Y P++
Sbjct: 89  RYEPQSPGYEPRSPG-YEPRS 108

[218][TOP]
>UniRef100_B2RD90 cDNA, FLJ96507 n=1 Tax=Homo sapiens RepID=B2RD90_HUMAN
          Length = 520

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           F P SP + P SP + P SP +   SP   P SP ++P SP +   SP++   SP++ P 
Sbjct: 45  FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 104

Query: 404 STGYSPSQPGYSPSS 360
           S GY P  PGY P S
Sbjct: 105 SPGYEPRSPGYEPRS 119

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
 Frame = -2

Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399
           P SP + P SP + P SP + P SP     SP   P SP+F+P               S 
Sbjct: 40  PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 99

Query: 398 GYSPSQPGYSPSSTSQYTPKT 336
            Y P  PGY P S   Y P++
Sbjct: 100 RYEPQSPGYEPRSPG-YEPRS 119

[219][TOP]
>UniRef100_Q9H5H4 Zinc finger protein 768 n=1 Tax=Homo sapiens RepID=ZN768_HUMAN
          Length = 540

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           F P SP + P SP + P SP +   SP   P SP ++P SP +   SP++   SP++ P 
Sbjct: 65  FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 124

Query: 404 STGYSPSQPGYSPSS 360
           S GY P  PGY P S
Sbjct: 125 SPGYEPRSPGYEPRS 139

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
 Frame = -2

Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399
           P SP + P SP + P SP + P SP     SP   P SP+F+P               S 
Sbjct: 60  PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 119

Query: 398 GYSPSQPGYSPSSTSQYTPKT 336
            Y P  PGY P S   Y P++
Sbjct: 120 RYEPQSPGYEPRSPG-YEPRS 139

[220][TOP]
>UniRef100_UPI00005878B7 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
           purpuratus RepID=UPI00005878B7
          Length = 374

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 30/76 (39%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
 Frame = -2

Query: 560 YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 384
           Y+ T+PSY+ ++PSY+ ++PSY+ S P+Y+ S PY + T+  Y+ S+P ++ ST  Y+ +
Sbjct: 148 YTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTSTTSSYTASTPSYTESTASYTTT 207

Query: 383 QPGYSPSSTSQYTPKT 336
           QP  +P +T   +P+T
Sbjct: 208 QPSAAPPTTMTSSPRT 223

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GY 393
           +S Y+ ++PSY+ + PSY+ + PSY+ S+P+Y  S+PY   T+P Y+ ++P ++ ST  Y
Sbjct: 103 TSSYTASTPSYTESRPSYATSRPSYTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSY 162

Query: 392 SPSQPGYSPSSTSQYTPK 339
           + S P Y+ S  S  T +
Sbjct: 163 ATSTPSYATSRPSYATSR 180

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
 Frame = -2

Query: 563 PYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYS 390
           PY  TS P Y+ ++PSY  ++P Y+ S+P+Y  S+PY + + P Y+ S+P ++ ST  Y+
Sbjct: 20  PYYTTSRPPYTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYT 79

Query: 389 PSQPGYSPSSTSQYTPKT 336
            S+P Y P+ST  YT  T
Sbjct: 80  ESRPSY-PTSTPYYTTST 96

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 29/74 (39%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = -2

Query: 563 PYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSP 387
           PY+ ++PSY+ ++PSY+ + PSY  S+P Y+ S+PY + T+  Y+ S+P ++ S   Y+ 
Sbjct: 63  PYTTSTPSYTASTPSYTESRPSYPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYAT 122

Query: 386 SQPGYSPSSTSQYT 345
           S+P Y+ S+ S  T
Sbjct: 123 SRPSYTTSTPSYPT 136

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
 Frame = -2

Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           ++ S+P  PTS P Y  T+P Y+ T+PSY+ S+P+Y+ S+P  + + P Y+ S P F+ +
Sbjct: 127 YTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTST 186

Query: 401 T-GYSPSQPGYSPSSTSQYT 345
           T  Y+ S P Y+  ST+ YT
Sbjct: 187 TSSYTASTPSYT-ESTASYT 205

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -2

Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           ++ S+P  PTS P Y+ ++PSY  ++P Y+ S P Y+ S+P  + ++P Y+ S P +  S
Sbjct: 29  YTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPTS 88

Query: 401 TGYSPSQPGYSPSSTSQYTPKT 336
           T Y  +   Y   +TS YT  T
Sbjct: 89  TPYYTTSTPYYTLTTSSYTAST 110

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 27/77 (35%), Positives = 47/77 (61%)
 Frame = -2

Query: 563 PYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPS 384
           PY+ ++PSY  ++P Y+ ++PSY  S+P Y+ S P  + ++P Y+ S+P ++ S    P+
Sbjct: 28  PYTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPT 87

Query: 383 QPGYSPSSTSQYTPKTN 333
              Y  +ST  YT  T+
Sbjct: 88  STPYYTTSTPYYTLTTS 104

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -2

Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           ++ S P  PTS P Y+ ++P Y+ T+ SY+ S+P+Y+ S P  + + P Y+ S+P +  S
Sbjct: 78  YTESRPSYPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYATSRPSYTTSTPSYPTS 137

Query: 401 TGYSPSQPGYSPSSTSQYTPKT 336
           T Y  +   Y  S+T  YT  T
Sbjct: 138 TPYYRTTTPYYTSTTPSYTAST 159

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           ++ S P Y+ ++PSY  ++P Y  T+P Y+ ++P+Y+ S+P  + ++P Y+ S P ++ S
Sbjct: 120 YATSRPSYTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYATS 179

Query: 401 TGYSPSQPGYSPSSTSQYTPKT 336
             Y  S      +ST  YT  T
Sbjct: 180 RPYFTSTTSSYTASTPSYTEST 201

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
 Frame = -2

Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +  S+PY  TS PSY  ++P Y+ + P Y+ S+P+Y+ S+P  + + P Y  S+P ++ S
Sbjct: 36  YPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPTSTPYYTTS 95

Query: 401 T--------GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
           T         Y+ S P Y+ S  S  T + +     P
Sbjct: 96  TPYYTLTTSSYTASTPSYTESRPSYATSRPSYTTSTP 132

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 29/110 (26%)
 Frame = -2

Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPS--------------------- 465
           +  S+PY  TS P Y+ T+ SY+ ++PSY+ S P+Y+ S                     
Sbjct: 85  YPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYATSRPSYTTSTPSYPTSTPYYRTT 144

Query: 464 SPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYS------PSSTSQYTPKT 336
           +PY + T+P Y+ S+P ++ ST  Y+ S+P Y+       S+TS YT  T
Sbjct: 145 TPYYTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTSTTSSYTAST 194

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 28/83 (33%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           ++ S+P Y+ ++PSY+ + PSY  ++P Y+ S+P Y+ ++   + ++P Y+ S P ++ S
Sbjct: 64  YTTSTPSYTASTPSYTESRPSYPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYATS 123

Query: 401 -TGYSPSQPGYSPSSTSQYTPKT 336
              Y+ S P Y P+ST  Y   T
Sbjct: 124 RPSYTTSTPSY-PTSTPYYRTTT 145

[221][TOP]
>UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
            RepID=A4RMP1_MAGGR
          Length = 1757

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 50/108 (46%), Positives = 64/108 (59%), Gaps = 17/108 (15%)
 Frame = -2

Query: 578  FSPSSP------YSPTSPSY---SPTSPSYSPTSPSYSP---SSPTYSPSSP-YNSGTSP 438
            + P SP      YSPTSP+    SPTSP YSP SPS+SP   +SP Y   SP + S TSP
Sbjct: 1640 YQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSP 1699

Query: 437  D--YSPSSPQFSPSTGY-SPSQPG-YSPSSTSQYTPKTNDNKDDPGTQ 306
            +  YSP+SP F  S    SP+ PG YSP+S S ++P++    +  G Q
Sbjct: 1700 NAHYSPTSPSFQRSPAQASPTSPGPYSPTSPS-FSPRSPGRNNRSGGQ 1746

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 33/107 (30%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSP--SYSPT------------SPSYSPSSPTYSPSSP---YNSG 447
            SP+SP+S    SYSPTSP   YSPT            SPS+SPSSP++ P+SP   + +G
Sbjct: 1569 SPTSPFSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSFSPSSPSFQPTSPIMRHGAG 1628

Query: 446  TSPDYSPSSPQFSPST----------------GYSPSQPGYSPSSTS 354
             S  YSP+SP + P +                G SP+ P YSP+S S
Sbjct: 1629 DSMGYSPTSPTYQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPS 1675

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 50/110 (45%), Positives = 56/110 (50%), Gaps = 26/110 (23%)
 Frame = -2

Query: 566  SPY-SPTSPSYSPTSP-SYSPTSP------SYSPSSPT--YSPSSPYNSG-----TSPDY 432
            +PY S TSP   PTSP S SPTSP      SYSP+SP   YSP+SP   G     +SP +
Sbjct: 1552 NPYGSGTSPR--PTSPFSTSPTSPFSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSF 1609

Query: 431  SPSSPQFSP-----------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SPSSP F P           S GYSP+ P Y P S     P   DN   P
Sbjct: 1610 SPSSPSFQPTSPIMRHGAGDSMGYSPTSPTYQPGS-----PTGGDNHYSP 1654

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 43/94 (45%), Positives = 53/94 (56%), Gaps = 26/94 (27%)
 Frame = -2

Query: 575  SPSSP-YSPTSPSYSP---TSPSY--------SPTSPS--YSPSSPTYSPSSPYNSGTSP 438
            SP+SP YSP SPS+SP   TSP Y        SPTSP+  YSP+SP++  S    S TSP
Sbjct: 1663 SPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSPNAHYSPTSPSFQRSPAQASPTSP 1722

Query: 437  D-YSPSSPQFSPST-----------GYSPSQPGY 372
              YSP+SP FSP +            YSP+ P +
Sbjct: 1723 GPYSPTSPSFSPRSPGRNNRSGGQDSYSPTSPSH 1756

[222][TOP]
>UniRef100_B9G524 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
           Group RepID=B9G524_ORYSJ
          Length = 536

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
 Frame = -2

Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-T 399
           PS P   P+ PSY P+ PSY P+ P Y+P  P Y+P  P    + P+YSP  P + PS  
Sbjct: 330 PSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPP 389

Query: 398 GYSPSQPGYSPSSTSQYTPK 339
            Y+P  P Y P S  +Y P+
Sbjct: 390 QYAPQPPSYVP-SPPEYAPE 408

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           + PS P Y+P  P Y+P  P   P+ P YSP  P+Y PS P  +   P Y PS P+++P 
Sbjct: 349 YEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPE 408

Query: 401 TG-YSPSQPGYSPSSTSQYTPK 339
              Y+P  PG +P S  +Y P+
Sbjct: 409 PPVYAPYPPGITP-SPPEYAPE 429

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = -2

Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYS 390
           +PY P+ P   P+ PSY P+ PSY PS P Y+P  P  +   P   PS P++SP    Y 
Sbjct: 327 TPY-PSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYV 385

Query: 389 PSQPGYSPSSTSQYTPKTNDNKDDP 315
           PS P Y+P   S Y P   +   +P
Sbjct: 386 PSPPQYAPQPPS-YVPSPPEYAPEP 409

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = -2

Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           PS P YSP  PSY P+ P Y+P  PSY PS P Y+P  P  +   P  +PS P+++P   
Sbjct: 372 PSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEP- 430

Query: 395 YSPSQPG 375
             P  PG
Sbjct: 431 -PPGPPG 436

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
 Frame = -2

Query: 572 PSSP-YSPTSPSYSP--TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           PS P  +P+ P  +P  + P   P+ PSY PS P+Y PS P  +   P Y+P  P   PS
Sbjct: 314 PSPPEVTPSPPEITPYPSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPS 373

Query: 401 -TGYSPSQPGYSPSSTSQYTPK 339
              YSP  P Y P S  QY P+
Sbjct: 374 PPEYSPEPPSYVP-SPPQYAPQ 394

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           +SP  P Y P+ P Y+P  PSY P+ P Y+P  P Y+P  P  + + P+Y+P  P   P 
Sbjct: 377 YSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEPPPGPPG 436

Query: 401 TGYSPSQPGYSPSS 360
             +     G  P++
Sbjct: 437 RWWRVPAAGGVPAA 450

[223][TOP]
>UniRef100_B4MT78 GK20106 n=1 Tax=Drosophila willistoni RepID=B4MT78_DROWI
          Length = 175

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 36/80 (45%), Positives = 56/80 (70%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           +P+SP +PT+P  SPT+P+  PTSP+  P+SPT +P++P  S TSP  +P++P  SP+T 
Sbjct: 25  TPTSPTTPTTPPTSPTTPTTPPTSPTTPPTSPT-TPTTPPTSPTSPT-TPTTPPTSPTT- 81

Query: 395 YSPSQPGYSPSSTSQYTPKT 336
             P+ P  SP++ ++ TP T
Sbjct: 82  --PTTPPTSPTTPAETTPTT 99

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = -2

Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSPST 399
           P+SP +PT+P  SPT+P  SPT+P+  P+SPT   +P++P  S T+P   P+        
Sbjct: 36  PTSPTTPTTPPTSPTTPPTSPTTPTTPPTSPTSPTTPTTPPTSPTTPTTPPT-------- 87

Query: 398 GYSPSQPGYSPSSTSQYTPKTN 333
             SP+ P  +  +T+Q TPK +
Sbjct: 88  --SPTTPAETTPTTTQATPKAS 107

[224][TOP]
>UniRef100_P13983 Extensin n=1 Tax=Nicotiana tabacum RepID=EXTN_TOBAC
          Length = 620

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 41/87 (47%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
 Frame = -2

Query: 572 PSSPYSPTSPSYSPTSPS--YSPTSPSYSPS-----SPTYSPSSPYNSGTSPDYSPSSPQ 414
           PS  YSP  P+YSP  PS  YSP  P+YSPS     +PT+SP  P  S   P YSP  P 
Sbjct: 278 PSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTPTPTFSPPPPAYS-PPPTYSPPPPT 336

Query: 413 FSP---STGYSPSQPGYSPSSTSQYTP 342
           + P   S  YSP  P YSP     Y+P
Sbjct: 337 YLPLPSSPIYSPPPPVYSPPPPPSYSP 363

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
 Frame = -2

Query: 572 PSSPYSPT-SPSYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           P+   SP  SP+YSP  P+YSP  PS  YSP  P YSPS P     +P +SP  P +SP 
Sbjct: 270 PAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPP--PTPTPTFSPPPPAYSPP 327

Query: 401 TGYSPSQPGYSPSSTSQ-YTP 342
             YSP  P Y P  +S  Y+P
Sbjct: 328 PTYSPPPPTYLPLPSSPIYSP 348

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 38/91 (41%), Positives = 45/91 (49%), Gaps = 16/91 (17%)
 Frame = -2

Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYS---PSSPTYSPSSP-YNSGTSPDYSPSSPQFS--- 408
           SP  P  P+YSP  P+YSP  P+Y+   P  PTYSP  P Y+    P YSP  P +S   
Sbjct: 400 SPPLPAPPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPP 459

Query: 407 --------PSTGYSPSQPGYSPSSTSQ-YTP 342
                   P   YSP  P YSP   S  Y+P
Sbjct: 460 PAYAQPPPPPPTYSPPPPAYSPPPPSPIYSP 490

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
 Frame = -2

Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS--P 405
           +SPS P +PT P++SP  P+YSP  P+YSP  PTY P       +SP YSP  P +S  P
Sbjct: 305 YSPSPPPTPT-PTFSPPPPAYSP-PPTYSPPPPTYLPLP-----SSPIYSPPPPVYSPPP 357

Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
              YSP  P Y P       P  + +   P
Sbjct: 358 PPSYSPPPPTYLPPPPPSSPPPPSFSPPPP 387

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
 Frame = -2

Query: 554 PTSPSYSPTSPSYSPTSPSYSPS---SPTYSPSSPYNS--GTSPDYSPSSPQFSPS---- 402
           P SP   P  P+YSP  P+Y+ S   SPTYSP  P  S    SP YSP  P +SPS    
Sbjct: 253 PPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPT 312

Query: 401 --TGYSPSQPGYSPSSTSQYTPKT 336
               +SP  P YSP  T    P T
Sbjct: 313 PTPTFSPPPPAYSPPPTYSPPPPT 336

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 41/105 (39%), Positives = 46/105 (43%), Gaps = 26/105 (24%)
 Frame = -2

Query: 578 FSPSSP-YSPTSP-SYSPTSPSY-------SPTSPSYSPSSPTYSPSSPYNSGTS----- 441
           +SP  P YSP  P SYSP  P+Y       SP  PS+SP  PTY  S P     S     
Sbjct: 346 YSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPA 405

Query: 440 -PDYSPSSPQFSP-----------STGYSPSQPGYSPSSTSQYTP 342
            P YSP  P +SP              YSP  P YSP     Y+P
Sbjct: 406 PPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSP 450

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 36/91 (39%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSP--SSPTYSPSSP-YNSGTSPDYSPSSPQF-- 411
           +P+  +SP  P+YSP  P+YSP  P+Y P  SSP YSP  P Y+    P YSP  P +  
Sbjct: 312 TPTPTFSPPPPAYSPP-PTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLP 370

Query: 410 ------SPSTGYSPSQPGY--SPSSTSQYTP 342
                  P   +SP  P Y  SP     Y+P
Sbjct: 371 PPPPSSPPPPSFSPPPPTYEQSPPPPPAYSP 401

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 36/88 (40%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
 Frame = -2

Query: 578 FSPSSPY----SPTSPSYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
           FSP  P      P  P+YSP     P+YSP  P+YSP  PTY+   P      P YSP  
Sbjct: 382 FSPPPPTYEQSPPPPPAYSPPLPAPPTYSPPPPTYSPPPPTYAQPPP----LPPTYSPPP 437

Query: 419 PQFS--PSTGYSPSQPGYSPSSTSQYTP 342
           P +S  P   YSP  P YSP   +   P
Sbjct: 438 PAYSPPPPPTYSPPPPTYSPPPPAYAQP 465

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 35/82 (42%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
 Frame = -2

Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSP-SYSPSSPTYSPSSPYNS---GTSPDYSPS 423
           +SP  P      P  P+YSP  P+YSP  P +YSP  PTYSP  P  +      P YSP 
Sbjct: 416 YSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPP 475

Query: 422 SPQFS---PSTGYSPSQPGYSP 366
            P +S   PS  YSP  P   P
Sbjct: 476 PPAYSPPPPSPIYSPPPPQVQP 497

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
 Frame = -2

Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---SPDYSPSSPQFSP- 405
           P+  ++P  P++ P+   + P SP   P  PTYSP  P  + +   SP YSP  P +SP 
Sbjct: 235 PTHRHAP--PTHQPSPLRHLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPP 292

Query: 404 --STGYSPSQPGYSPSSTSQYTP 342
             S  YSP  P YSPS     TP
Sbjct: 293 PPSPIYSPPPPAYSPSPPPTPTP 315

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 35/75 (46%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
 Frame = -2

Query: 578 FSPSSP-YSPTSP-SYSPTSPSYSPTSPSYS---PSSPTYSPSSPYNS--GTSPDYSPSS 420
           +SP  P YSP  P +YSP  P+YSP  P+Y+   P  PTYSP  P  S    SP YSP  
Sbjct: 433 YSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPIYSPPP 492

Query: 419 PQFSP-STGYSPSQP 378
           PQ  P    +SP  P
Sbjct: 493 PQVQPLPPTFSPPPP 507

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 20/96 (20%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYS---PTSPSYSPTSPSYSPS--SPTYSPSSPYNSGTSPDYSPSSP 417
           +SP  P YSP  P+Y+   P  P+YSP  P+YSP   SP YSP  P      P +SP  P
Sbjct: 448 YSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPIYSPPPPQVQPLPPTFSPPPP 507

Query: 416 QF--------------SPSTGYSPSQPGYSPSSTSQ 351
           +               +P+ G  PS P +SP    Q
Sbjct: 508 RRIHLPPPPHRQPRPPTPTYGQPPSPPTFSPPPPRQ 543

[225][TOP]
>UniRef100_UPI0001796FA8 PREDICTED: zinc finger protein 768 n=1 Tax=Equus caballus
           RepID=UPI0001796FA8
          Length = 547

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           F P +P +   SP + P SP +   SP + P SP ++P S  +   SP++ P SP++ P 
Sbjct: 65  FEPQNPEFESQSPRFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSPRYEPQ 124

Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
           S GY P  PGY  S +S+Y  K+
Sbjct: 125 SPGYEPKSPGYE-SQSSRYESKS 146

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = -2

Query: 578 FSPSSPYSPT-SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           F+P S  S + SP + P SP Y P SP Y P SP Y   S      SP Y P +P F P 
Sbjct: 100 FAPRSSESDSQSPEFEPQSPRYEPQSPGYEPKSPGYESQSSRYESKSPGYEPQNPVFEPQ 159

Query: 401 TGYSPSQPGYSPSSTSQ 351
              +P     SP   +Q
Sbjct: 160 ---NPEFKTQSPEFEAQ 173

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 15/89 (16%)
 Frame = -2

Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399
           P SP + P +P +   SP + P SP     SP + P SP+F+P               S 
Sbjct: 60  PQSPGFEPQNPEFESQSPRFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSP 119

Query: 398 GYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            Y P  PGY P S    +  +      PG
Sbjct: 120 RYEPQSPGYEPKSPGYESQSSRYESKSPG 148

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 15/89 (16%)
 Frame = -2

Query: 581 RFSPSSP--------YSPTSPSYSPTS-------PSYSPTSPSYSPSSPTYSPSSPYNSG 447
           RF P SP        + P SP ++P S       P + P SP Y P SP Y P SP    
Sbjct: 78  RFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSPRYEPQSPGYEPKSPGYES 137

Query: 446 TSPDYSPSSPQFSPSTGYSPSQPGYSPSS 360
            S  Y   SP      GY P  P + P +
Sbjct: 138 QSSRYESKSP------GYEPQNPVFEPQN 160

[226][TOP]
>UniRef100_Q3JTV6 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei
           1710b RepID=Q3JTV6_BURP1
          Length = 364

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 49/90 (54%), Positives = 61/90 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 252 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 304

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
            SP+ P    S TS  +P  +D  D  G Q
Sbjct: 305 TSPTSPTSPTSPTSPTSPGRSDQYDRRGRQ 334

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 47/88 (53%), Positives = 60/88 (68%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 243 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 295

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            SP+ P    S TS  +P +  +   PG
Sbjct: 296 TSPTSPTSPTSPTSPTSPTSPTSPTSPG 323

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 183 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 235

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 236 TSPTSPTSPTSPTSPTSPTSPTSPTSP 262

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 186 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 238

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 239 TSPTSPTSPTSPTSPTSPTSPTSPTSP 265

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 189 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 241

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 242 TSPTSPTSPTSPTSPTSPTSPTSPTSP 268

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 192 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 244

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 245 TSPTSPTSPTSPTSPTSPTSPTSPTSP 271

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 195 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 247

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 248 TSPTSPTSPTSPTSPTSPTSPTSPTSP 274

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 198 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 250

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 251 TSPTSPTSPTSPTSPTSPTSPTSPTSP 277

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 201 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 253

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 254 TSPTSPTSPTSPTSPTSPTSPTSPTSP 280

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 204 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 256

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 257 TSPTSPTSPTSPTSPTSPTSPTSPTSP 283

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 213 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 265

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 266 TSPTSPTSPTSPTSPTSPTSPTSPTSP 292

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 216 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 268

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 269 TSPTSPTSPTSPTSPTSPTSPTSPTSP 295

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 219 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 271

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 272 TSPTSPTSPTSPTSPTSPTSPTSPTSP 298

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 222 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 274

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 275 TSPTSPTSPTSPTSPTSPTSPTSPTSP 301

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 225 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 277

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 278 TSPTSPTSPTSPTSPTSPTSPTSPTSP 304

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 228 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 280

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 281 TSPTSPTSPTSPTSPTSPTSPTSPTSP 307

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 231 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 283

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 284 TSPTSPTSPTSPTSPTSPTSPTSPTSP 310

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 234 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 286

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 287 TSPTSPTSPTSPTSPTSPTSPTSPTSP 313

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 45/86 (52%), Positives = 57/86 (66%)
 Frame = -2

Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
           P SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++  
Sbjct: 181 PVSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 233

Query: 392 SPSQPGYSPSSTSQYTPKTNDNKDDP 315
           SP+ P    S TS  +P +  +   P
Sbjct: 234 SPTSPTSPTSPTSPTSPTSPTSPTSP 259

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = -2

Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           R  P  P SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP+
Sbjct: 175 RRRPRRPVSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPT 227

Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
           +  SP+ P    S TS  +P +  +   P
Sbjct: 228 SPTSPTSPTSPTSPTSPTSPTSPTSPTSP 256

[227][TOP]
>UniRef100_B1HHT1 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei
           S13 RepID=B1HHT1_BURPS
          Length = 282

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 49/90 (54%), Positives = 61/90 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 170 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 222

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
            SP+ P    S TS  +P  +D  D  G Q
Sbjct: 223 TSPTSPTSPTSPTSPTSPGRSDQYDRRGRQ 252

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN--SGTSPDYSPSSPQFSPS 402
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP +  S TSP  SP+SP  SP+
Sbjct: 158 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSPTSPTSPTSPT-SPTSPT-SPT 211

Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
           +  SP+ P    S TS  +P +  +   PG
Sbjct: 212 SPTSPTSPTSPTSPTSPTSPTSPTSPTSPG 241

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 128 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 180

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 181 TSPTSPTSPTSPTSPTSPTSPTSPTSP 207

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 131 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 183

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 184 TSPTSPTSPTSPTSPTSPTSPTSPTSP 210

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 134 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 186

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 187 TSPTSPTSPTSPTSPTSPTSPTSPTSP 213

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 137 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 189

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 190 TSPTSPTSPTSPTSPTSPTSPTSPTSP 216

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 140 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 192

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 193 TSPTSPTSPTSPTSPTSPTSPTSPTSP 219

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 143 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 195

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 196 TSPTSPTSPTSPTSPTSPTSPTSPTSP 222

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 146 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 198

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 199 TSPTSPTSPTSPTSPTSPTSPTSPTSP 225

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++ 
Sbjct: 149 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 201

Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            SP+ P    S TS  +P +  +   P
Sbjct: 202 TSPTSPTSPTSPTSPTSPTSPTSPTSP 228

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 45/86 (52%), Positives = 57/86 (66%)
 Frame = -2

Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
           P SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP++  
Sbjct: 126 PVSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 178

Query: 392 SPSQPGYSPSSTSQYTPKTNDNKDDP 315
           SP+ P    S TS  +P +  +   P
Sbjct: 179 SPTSPTSPTSPTSPTSPTSPTSPTSP 204

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = -2

Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           R  P  P SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP  S TSP  SP+SP  SP+
Sbjct: 120 RRRPRRPVSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPT 172

Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
           +  SP+ P    S TS  +P +  +   P
Sbjct: 173 SPTSPTSPTSPTSPTSPTSPTSPTSPTSP 201

[228][TOP]
>UniRef100_Q7XRB2 OSJNBa0006B20.10 protein n=3 Tax=Oryza sativa RepID=Q7XRB2_ORYSJ
          Length = 335

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
 Frame = -2

Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ---F 411
           R + S  YSP SP     SP Y+P SPS   +SP Y+P SP     SPDY+P+SP     
Sbjct: 113 RRAASPDYSPESPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAA 172

Query: 410 SPSTGYSPSQPGYSPSSTSQYTPKT 336
           + S  Y+P  P    +++  Y+P T
Sbjct: 173 ASSPDYTPESPPRRRAASPDYSPST 197

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
 Frame = -2

Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP----- 417
           R + S  YSP++P     SP YSP++P    +SP YSPS+P     SPDY+P SP     
Sbjct: 186 RRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAA 245

Query: 416 -----QFSP-----STGYSPSQPGYSPSSTSQYTPKT 336
                Q +P     S  Y+PS P    +++  YTP T
Sbjct: 246 SPDYTQMTPPRRAASPDYTPSTPPPPRAASPDYTPST 282

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = -2

Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS-PQFSP 405
           R + S  Y+P SP     SP YSP SP    +SP Y+P SP     SPDYSP S P+ + 
Sbjct: 71  RRAASPDYTPESPPRRAASPDYSPASPPRRAASPDYTPESPPRRAASPDYSPESPPRRAA 130

Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
           S  Y+P+ P    +S   YTP++
Sbjct: 131 SPDYTPASPSRRAAS-PDYTPES 152

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 16/98 (16%)
 Frame = -2

Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-QFSP 405
           R + S  YSP SP     SP Y+P SP    +SP YSP SP     SPDY+P+SP + + 
Sbjct: 85  RRAASPDYSPASPPRRAASPDYTPESPPRRAASPDYSPESPPRRAASPDYTPASPSRRAA 144

Query: 404 STGYSP-------SQPGYSPSSTSQ--------YTPKT 336
           S  Y+P       + P Y+P+S S+        YTP++
Sbjct: 145 SPDYTPESPPRRAASPDYTPASPSRRAAASSPDYTPES 182

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSP--------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
           SPS   + +SP Y+P         SP YSP++P    +SP YSPS+P     SPDYSPS+
Sbjct: 166 SPSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPST 225

Query: 419 -PQFSPSTGYSPSQP---GYSPSSTSQYTPKTNDNKD 321
            P+ + S  Y+P  P     SP  T    P+   + D
Sbjct: 226 PPRRAASPDYTPMSPPRRAASPDYTQMTPPRRAASPD 262

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 25/106 (23%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSP-------SSPTYSPSSPYN--SGTSPDYS 429
           +SP SP     SP Y+P SPS    SP Y+P       +SP Y+P+SP    + +SPDY+
Sbjct: 120 YSPESPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAAASSPDYT 179

Query: 428 PSSP--QFSPSTGYSPS-------QPGYSPS------STSQYTPKT 336
           P SP  + + S  YSPS        P YSPS      ++  Y+P T
Sbjct: 180 PESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPST 225

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 16/94 (17%)
 Frame = -2

Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
           +SPS+P        YSP++P     SP Y+P SP    +SP Y+  +P     SPDY+PS
Sbjct: 207 YSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDYTQMTPPRRAASPDYTPS 266

Query: 422 --------SPQFSPSTGYSPSQPGYSPSSTSQYT 345
                   SP ++PST   PS P   PS+   +T
Sbjct: 267 TPPPPRAASPDYTPST--PPSSP--LPSAAESFT 296

[229][TOP]
>UniRef100_Q7RJS0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
            RepID=Q7RJS0_PLAYO
          Length = 2312

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 48/101 (47%), Positives = 55/101 (54%), Gaps = 32/101 (31%)
 Frame = -2

Query: 578  FSPSSPYSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSP 480
            +SPS  YSPTSP+        YSPTSP                    YS TSP YSP+SP
Sbjct: 2148 YSPS--YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSP 2205

Query: 479  TYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372
             YSPSSP  N+ +SP YSP   +SP+FSP S  YS S P Y
Sbjct: 2206 QYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 2246

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
 Frame = -2

Query: 569  SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402
            S  YS TSP YSPTSP YSP+SP   +PSSP YSP   +SP  S TSP YS SSP +  +
Sbjct: 2190 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN 2249

Query: 401  ---TGYSPSQPGYSPSSTSQ 351
                G +P  P Y   S  Q
Sbjct: 2250 ENMAGKNPLSPAYMLQSRVQ 2269

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 15/78 (19%)
 Frame = -2

Query: 548  SPSYSPTSPSYSPTSPS-YSPSSP------------TYSPSSPYNSGTSPDYSPSSPQFS 408
            SPSYSPTSP+Y+  + + YSP+SP             Y+  SP  S TSP YSP+SPQ+S
Sbjct: 2149 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYS 2208

Query: 407  PSTGY--SPSQPGYSPSS 360
            PS+    +PS P YSP S
Sbjct: 2209 PSSPVPNNPSSPQYSPYS 2226

[230][TOP]
>UniRef100_B8BEN2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=B8BEN2_ORYSI
          Length = 519

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = -2

Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-T 399
           PS P   P+ PSY P+ PSY P+ P Y+P  P Y+P  P    + P+YSP  P + PS  
Sbjct: 293 PSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPP 352

Query: 398 GYSPSQPGYSPS 363
            Y+P  P Y PS
Sbjct: 353 QYAPQPPSYVPS 364

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           + PS P Y P+ P Y+P  P Y+P  P   PS P YSP  P    + P Y+P  P + PS
Sbjct: 305 YEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPS 364

Query: 401 TG-YSPSQPGYSPSSTSQYTPK 339
              Y+P  PG +P S  +Y P+
Sbjct: 365 PPVYAPYPPGITP-SPPEYAPE 385

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = -2

Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYS 390
           +PY P+ P   P+ PSY P+ PSY PS P Y+P  P  +   P   PS P++SP    Y 
Sbjct: 290 TPY-PSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYV 348

Query: 389 PSQPGYSPSSTSQYTP 342
           PS P Y+P   S Y P
Sbjct: 349 PSPPQYAPQPPS-YVP 363

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           ++P  P Y+P  P   P+ P YSP  PSY PS P Y+P  P    + P Y+P  P  +PS
Sbjct: 319 YAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPVYAPYPPGITPS 378

Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
              Y+P  P   P     Y P
Sbjct: 379 PPEYAPEPPPGPPGGGGGYLP 399

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
 Frame = -2

Query: 572 PSSP-YSPTSPSYSP--TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
           PS P  +P+ P  +P  + P   P+ PSY PS P+Y PS P  +   P Y+P  P   PS
Sbjct: 277 PSPPEVTPSPPEITPYPSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPS 336

Query: 401 -TGYSPSQPGYSPSSTSQYTPK 339
              YSP  P Y P S  QY P+
Sbjct: 337 PPEYSPEPPSYVP-SPPQYAPQ 357

[231][TOP]
>UniRef100_Q4Y307 Putative uncharacterized protein n=1 Tax=Plasmodium chabaudi
           RepID=Q4Y307_PLACH
          Length = 133

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 42/80 (52%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402
           S  YS TSP YSPTSP YSP+SP   +PSSP YSP   +SP  S TSP YS SSP +  S
Sbjct: 11  SXVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 70

Query: 401 ---TGYSPSQPGYSPSSTSQ 351
               G +P  P Y   S  Q
Sbjct: 71  ENMAGKNPLSPAYMLQSRVQ 90

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -2

Query: 560 YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 384
           Y+  S  YS TSP YSPTSP YSPSSP   P++P +   SP YS +SP+FSP S  YS S
Sbjct: 7   YNIMSXVYSVTSPKYSPTSPQYSPSSPV--PNNPSSPQYSP-YSITSPKFSPTSPAYSIS 63

Query: 383 QPGYSPS 363
            P Y  S
Sbjct: 64  SPVYDKS 70

[232][TOP]
>UniRef100_C6F1F7 DNA-directed RNA polymerase n=1 Tax=Plasmodium gallinaceum
            RepID=C6F1F7_PLAGA
          Length = 2200

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 49/109 (44%), Positives = 56/109 (51%), Gaps = 30/109 (27%)
 Frame = -2

Query: 578  FSPSSPYSPTSPS-------YSPTSPS------------------YSPTSPSYSPSSPTY 474
            +SPS  YSPTSPS       YSPTSP                   YS TSP YSP SP Y
Sbjct: 2039 YSPS--YSPTSPSYNADNVYYSPTSPKNQMDDVKSNIKYNVMSPVYSVTSPKYSPMSPQY 2096

Query: 473  SPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
            SP+SP  N+  SP YSP   +SP+FSP S  YS S P Y  ++     P
Sbjct: 2097 SPTSPVANNPGSPHYSPYSITSPKFSPTSPAYSISSPVYDKNAVLNNQP 2145

[233][TOP]
>UniRef100_C6F098 RNA polymerase II (Fragment) n=2 Tax=Plasmodium vinckei
           RepID=C6F098_PLAVN
          Length = 161

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 42/80 (52%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402
           S  YS TSP YSPTSP YSP+SP   +PSSP YSP   +SP  S TSP YS SSP +  S
Sbjct: 39  SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 98

Query: 401 ---TGYSPSQPGYSPSSTSQ 351
               G +P  P Y   S  Q
Sbjct: 99  ENMAGKNPLSPAYMLQSRVQ 118

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 46/98 (46%), Positives = 52/98 (53%), Gaps = 32/98 (32%)
 Frame = -2

Query: 560 YSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 462
           YSPTSP+        YSPTSP                    YS TSP YSP+SP YSPSS
Sbjct: 1   YSPTSPTYNANNNAYYSPTSPKNQAGDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60

Query: 461 PY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGYSPS 363
           P  N+ +SP YSP   +SP+FSP S  YS S P Y  S
Sbjct: 61  PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 98

[234][TOP]
>UniRef100_UPI0000D9F0D9 PREDICTED: similar to zinc finger protein 239 (predicted) n=1
           Tax=Macaca mulatta RepID=UPI0000D9F0D9
          Length = 650

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           F P SP + P SP + P SP +   SP   P SP ++P SP +   SP++   SP++ P 
Sbjct: 182 FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 241

Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNK 324
           S GY P  P Y  S +S+Y  +  + K
Sbjct: 242 SPGYEPRSPSYE-SESSRYESQNPELK 267

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
 Frame = -2

Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPST 399
           P SP + P SP + P SP + P SP +   SP   P SP  +  SP+    SP+F S S 
Sbjct: 177 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 236

Query: 398 GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
            Y P  PGY P S S  +  +     +P
Sbjct: 237 RYEPQSPGYEPRSPSYESESSRYESQNP 264

[235][TOP]
>UniRef100_Q1WKU0 Putative RNA polymerase II 215 kD subunit (Fragment) n=2
           Tax=melanogaster subgroup RepID=Q1WKU0_DROYA
          Length = 766

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-Y 393
           SSP SP  PS SP  P+    SPSYSP+SP Y+ SSP   G SP+YSPSSP +SP++  Y
Sbjct: 698 SSPSSP-GPSMSPYFPASPSVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLY 754

Query: 392 SPSQPGYSPSS 360
           + + P Y+ ++
Sbjct: 755 ASASPRYASTT 765

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
 Frame = -2

Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
           FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 660 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 719

Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360
            YSP+SP ++ S+       YSPS P YSP+S
Sbjct: 720 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 751

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 6/59 (10%)
 Frame = -2

Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
           SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  +  SP Y+ ++P
Sbjct: 708 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTP 766

[236][TOP]
>UniRef100_C5Y8R4 Putative uncharacterized protein Sb06g017200 n=1 Tax=Sorghum
           bicolor RepID=C5Y8R4_SORBI
          Length = 367

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 20/101 (19%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPS--------YSPTSPSYSPT---------SPSYSPSSPTYSPSSPYN 453
           +SP++P Y+P +PS        YSP SP Y+P          SP YSP+SP Y+P +P +
Sbjct: 133 YSPATPEYTPLTPSSQRSGSPVYSPASPEYTPLLTPSSRRFGSPDYSPASPEYTPLTPSS 192

Query: 452 SGT-SPDYSPSSPQFSPSTGYSPS-QPGYSPSSTSQYTPKT 336
             + SP YSP SP+++P T    S  P Y+P++ + YTP++
Sbjct: 193 QRSGSPVYSPGSPEYTPLTPPKRSGSPAYTPAA-ANYTPRS 232

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 28/103 (27%)
 Frame = -2

Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSP---------SSPTYSPSSP---------YN 453
           +SP++P   T  S    SP YSP SP Y+P          SP YSP++P           
Sbjct: 90  YSPATPDPATPSSQRSGSPVYSPASPEYTPLLKPSSRRFGSPDYSPATPEYTPLTPSSQR 149

Query: 452 SGTSPDYSPSSPQFSP----------STGYSPSQPGYSPSSTS 354
           SG SP YSP+SP+++P          S  YSP+ P Y+P + S
Sbjct: 150 SG-SPVYSPASPEYTPLLTPSSRRFGSPDYSPASPEYTPLTPS 191

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 18/83 (21%)
 Frame = -2

Query: 578 FSPSSP-YSPT---------SPSYSPTSPSYSPTSPS--------YSPSSPTYSPSSPYN 453
           +SP+SP Y+P          SP YSP SP Y+P +PS        YSP SP Y+P +P  
Sbjct: 155 YSPASPEYTPLLTPSSRRFGSPDYSPASPEYTPLTPSSQRSGSPVYSPGSPEYTPLTPPK 214

Query: 452 SGTSPDYSPSSPQFSPSTGYSPS 384
              SP Y+P++  ++P +  S S
Sbjct: 215 RSGSPAYTPAAANYTPRSPSSSS 237

[237][TOP]
>UniRef100_Q25655 RNA polymerase largest subunit (Fragment) n=1 Tax=Plasmodium
           berghei RepID=Q25655_PLABE
          Length = 204

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 47/101 (46%), Positives = 55/101 (54%), Gaps = 32/101 (31%)
 Frame = -2

Query: 578 FSPSSPYSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSP 480
           +SPS  YSPTSP+        YSPTSP                    YS TSP YSP+SP
Sbjct: 40  YSPS--YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSP 97

Query: 479 TYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372
            YSP+SP  N+ +SP YSP   +SP+FSP S  YS S P Y
Sbjct: 98  KYSPTSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 138

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 44/103 (42%), Positives = 53/103 (51%), Gaps = 27/103 (26%)
 Frame = -2

Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSG-- 447
           +SP+SP             Y+  SP YS TSP YSPTSP YSP+SP   +PSSP  S   
Sbjct: 59  YSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYSPTSPVPNNPSSPQYSPYS 118

Query: 446 -TSPDYSPSSPQFSPS----------TGYSPSQPGYSPSSTSQ 351
            TSP +SP+SP +S S          TG +P  P Y   S  Q
Sbjct: 119 ITSPKFSPTSPAYSISSPVYDKNENMTGKNPLSPAYMLQSRVQ 161

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 43/95 (45%), Positives = 50/95 (52%), Gaps = 32/95 (33%)
 Frame = -2

Query: 548 SPSYSPTSPS--------YSPTSPS-------------------YSPSSPTYSPSSPYNS 450
           SPSYSPTSP+        YSPTSP                    YS +SP YSP+SP  S
Sbjct: 41  SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYS 100

Query: 449 GTSP-DYSPSSPQFSP----STGYSPSQPGYSPSS 360
            TSP   +PSSPQ+SP    S  +SP+ P YS SS
Sbjct: 101 PTSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISS 135

[238][TOP]
>UniRef100_C6F096 RNA polymerase II (Fragment) n=1 Tax=Plasmodium yoelii nigeriensis
           RepID=C6F096_9APIC
          Length = 161

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402
           S  YS TSP YSPTSP YSP+SP   +PSSP YSP   +SP  S TSP YS SSP +  +
Sbjct: 39  SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKT 98

Query: 401 ---TGYSPSQPGYSPSSTSQ 351
               G +P  P Y   S  Q
Sbjct: 99  ENMAGKNPLSPAYMLQSRVQ 118

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 45/95 (47%), Positives = 51/95 (53%), Gaps = 32/95 (33%)
 Frame = -2

Query: 560 YSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 462
           YSPTSP+        YSPTSP                    YS TSP YSP+SP YSPSS
Sbjct: 1   YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60

Query: 461 PY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372
           P  N+ +SP YSP   +SP+FSP S  YS S P Y
Sbjct: 61  PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95

[239][TOP]
>UniRef100_C6F093 RNA polymerase II (Fragment) n=2 Tax=Plasmodium yoelii
           RepID=C6F093_PLAYO
          Length = 161

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402
           S  YS TSP YSPTSP YSP+SP   +PSSP YSP   +SP  S TSP YS SSP +  +
Sbjct: 39  SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN 98

Query: 401 ---TGYSPSQPGYSPSSTSQ 351
               G +P  P Y   S  Q
Sbjct: 99  ENMAGKNPLSPAYMLQSRVQ 118

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 45/95 (47%), Positives = 51/95 (53%), Gaps = 32/95 (33%)
 Frame = -2

Query: 560 YSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 462
           YSPTSP+        YSPTSP                    YS TSP YSP+SP YSPSS
Sbjct: 1   YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60

Query: 461 PY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372
           P  N+ +SP YSP   +SP+FSP S  YS S P Y
Sbjct: 61  PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95

[240][TOP]
>UniRef100_A9U3I4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9U3I4_PHYPA
          Length = 291

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 46/80 (57%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPT----SPSYSPSSPTYS--PSSPYNSGTSPDYSPSSPQ 414
           S SSP +P+SPSYS  SP YSPT    SPS +PSSPTYS  P SP  SG SP  +PSSP 
Sbjct: 185 SSSSPTTPSSPSYS--SPPYSPTPSDPSPS-TPSSPTYSSPPYSPTPSGPSPP-TPSSPT 240

Query: 413 FSPSTGYSPSQPGYSPSSTS 354
           +S S  YSP+  G SP++ S
Sbjct: 241 YS-SPPYSPTPSGSSPTTPS 259

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYS--PTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           S PYSPT    SP+SP+YS  P SP+ S SSPT +PSSP  S +SP YSP+    SPST 
Sbjct: 158 SPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPT-TPSSP--SYSSPPYSPTPSDPSPSTP 214

Query: 395 YSP--SQPGYSP--SSTSQYTPKTNDNKDDP 315
            SP  S P YSP  S  S  TP +      P
Sbjct: 215 SSPTYSSPPYSPTPSGPSPPTPSSPTYSSPP 245

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 43/79 (54%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYS--PSSPYNSGTSPDYSPSSPQFSPS 402
           +PS P SP+SP+YS  SP YSPT    SPSSPTYS  P SP  S +SP  +PSSP +S S
Sbjct: 145 APSGP-SPSSPTYS--SPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPT-TPSSPSYS-S 199

Query: 401 TGYSPSQPGYSPSSTSQYT 345
             YSP+    SPS+ S  T
Sbjct: 200 PPYSPTPSDPSPSTPSSPT 218

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 49/107 (45%), Positives = 57/107 (53%), Gaps = 20/107 (18%)
 Frame = -2

Query: 575 SPSSPYSPTSPS-----YSPTSPSYSPTSPS-YSPSSPTYS--PSSPYNSGTSPD----- 435
           S SSP +P+SP+     YSP   S SPT+PS  SPSSPTYS  P SP  SG+SP      
Sbjct: 117 SSSSPTTPSSPTYSSPPYSPAPSSPSPTAPSGPSPSSPTYSSPPYSPTPSGSSPSSPTYS 176

Query: 434 ---YSPSSPQFSPSTGYSP--SQPGYS--PSSTSQYTPKTNDNKDDP 315
              YSP+    SP+T  SP  S P YS  PS  S  TP +      P
Sbjct: 177 SPPYSPTPSSSSPTTPSSPSYSSPPYSPTPSDPSPSTPSSPTYSSPP 223

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 43/86 (50%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYS--PSSPTYSPSSPYN----SGTSPDYSPSSPQ 414
           SPSSP + +SP YSPT    SP+SP+YS  P SPT S SSP      S +SP YSP+   
Sbjct: 150 SPSSP-TYSSPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPTTPSSPSYSSPPYSPTPSD 208

Query: 413 FSPSTGYSP--SQPGYSPSSTSQYTP 342
            SPST  SP  S P YSP+ +    P
Sbjct: 209 PSPSTPSSPTYSSPPYSPTPSGPSPP 234

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 45/90 (50%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
 Frame = -2

Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPTSPSYSP---SSPTYS--PSSPYNSGTSPDY---- 432
           +SP +P   SP +PS S +SP YSPT  S SP   SSPTYS  P SP  S  SP      
Sbjct: 90  YSPGTPSGGSPVTPSPSYSSPPYSPTPSSSSPTTPSSPTYSSPPYSPAPSSPSPTAPSGP 149

Query: 431 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
           SPSSP +S S  YSP+  G SPSS +  +P
Sbjct: 150 SPSSPTYS-SPPYSPTPSGSSPSSPTYSSP 178

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 43/78 (55%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
 Frame = -2

Query: 575 SPSSPYSPT--SPSYSPTSPSYSPTSPSYSPSSPTYS--PSSPYNSGTSPDYSPSSPQFS 408
           SPS+P SPT  SP YSPT    SP     +PSSPTYS  P SP  SG+SP  +PSSP +S
Sbjct: 210 SPSTPSSPTYSSPPYSPTPSGPSPP----TPSSPTYSSPPYSPTPSGSSPT-TPSSPSYS 264

Query: 407 PSTGYSPSQPGYSPSSTS 354
            S  YSP+  G SPS  S
Sbjct: 265 -SPPYSPTPSGGSPSGGS 281

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 11/96 (11%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPT--SPSYSPSSPTYSPSSPYN-SGTSPDYSPSSPQFSPS- 402
           S PYSPT  S SPT+PS SPT  SP YSP+  + SP++P   S +SP YS  SP +SP+ 
Sbjct: 109 SPPYSPTPSSSSPTTPS-SPTYSSPPYSPAPSSPSPTAPSGPSPSSPTYS--SPPYSPTP 165

Query: 401 TGYSPSQPGYS-------PSSTSQYTPKTNDNKDDP 315
           +G SPS P YS       PSS+S  TP +      P
Sbjct: 166 SGSSPSSPTYSSPPYSPTPSSSSPTTPSSPSYSSPP 201

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 8/81 (9%)
 Frame = -2

Query: 572 PSSPYSPT-SPSY----SPTSPSYSPTSPSYSPSSPTY-SPSSPYNSGTSPDYSPSSPQF 411
           P++PY+P+ SP      SP +P+   +SP YSP +P+  SP +P  S +SP YSP+    
Sbjct: 60  PATPYTPSYSPPVASDPSPVTPTPVYSSPPYSPGTPSGGSPVTPSPSYSSPPYSPTPSSS 119

Query: 410 SPSTGYSP--SQPGYSPSSTS 354
           SP+T  SP  S P YSP+ +S
Sbjct: 120 SPTTPSSPTYSSPPYSPAPSS 140

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
 Frame = -2

Query: 575 SPSSPYSPT----SPSYSPTSPSY-SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
           S  SP +PT    SP YSP +PS  SP +PS S SSP YSP+   +S T+P    SSP +
Sbjct: 74  SDPSPVTPTPVYSSPPYSPGTPSGGSPVTPSPSYSSPPYSPTPSSSSPTTP----SSPTY 129

Query: 410 SPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
           S S  YSP+    SP++ S  +P +      P
Sbjct: 130 S-SPPYSPAPSSPSPTAPSGPSPSSPTYSSPP 160

[241][TOP]
>UniRef100_C6F091 RNA polymerase II (Fragment) n=1 Tax=Plasmodium berghei
           RepID=C6F091_PLABE
          Length = 161

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 45/95 (47%), Positives = 51/95 (53%), Gaps = 32/95 (33%)
 Frame = -2

Query: 560 YSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 462
           YSPTSP+        YSPTSP                    YS TSP YSP+SP YSPSS
Sbjct: 1   YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60

Query: 461 PY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372
           P  N+ +SP YSP   +SP+FSP S  YS S P Y
Sbjct: 61  PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 45/103 (43%), Positives = 53/103 (51%), Gaps = 27/103 (26%)
 Frame = -2

Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSG-- 447
           +SP+SP             Y+  SP YS TSP YSPTSP YSPSSP   +PSSP  S   
Sbjct: 16  YSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYS 75

Query: 446 -TSPDYSPSSPQFSPS----------TGYSPSQPGYSPSSTSQ 351
            TSP +SP+SP +S S          TG +P  P Y   S  Q
Sbjct: 76  ITSPKFSPTSPAYSISSPVYDKNENMTGKNPLSPAYMLQSRVQ 118

[242][TOP]
>UniRef100_A0E2M3 Chromosome undetermined scaffold_75, whole genome shotgun sequence
           n=1 Tax=Paramecium tetraurelia RepID=A0E2M3_PARTE
          Length = 288

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 33/90 (36%), Positives = 36/90 (40%), Gaps = 10/90 (11%)
 Frame = -2

Query: 578 FSPSSPYSPTSPSYSPTSPSYSPT----------SPSYSPSSPTYSPSSPYNSGTSPDYS 429
           + P  PY P  P Y PT P Y P            P Y P  P Y P  P      P Y 
Sbjct: 154 YPPQQPYPPQQPGY-PTQPGYPPQPGYPAQPYPQQPGYPPQQPGYPPQQPGYPPQQPGYP 212

Query: 428 PSSPQFSPSTGYSPSQPGYSPSSTSQYTPK 339
           P  P + P  GY P QPGY P     Y P+
Sbjct: 213 PQQPGYPPQPGYPPQQPGYPPQQPG-YPPQ 241

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 32/82 (39%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
 Frame = -2

Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
           + P  P Y P  P Y P  P Y P  P Y P  P Y P  P      P Y P  P + P 
Sbjct: 190 YPPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQ-PGYPPQQPGYPPQQPGYPPQQPGYPPQ 248

Query: 404 STGYSPSQPGYSPSSTSQYTPK 339
             GY P QPGY      QY P+
Sbjct: 249 QPGYPPQQPGY---PAQQYPPQ 267

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 27/69 (39%), Positives = 30/69 (43%)
 Frame = -2

Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
           + P  P  P  P Y P  P Y P  P Y P  P Y P  P      P Y   + Q+ P  
Sbjct: 211 YPPQQPGYPPQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGY--PAQQYPPQQ 268

Query: 398 GYSPSQPGY 372
           GY P QPGY
Sbjct: 269 GY-PPQPGY 276

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 35/90 (38%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
 Frame = -2

Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
           + P   Y P  P Y P  P Y PT P Y P  P Y P+ PY     P Y P  P + P  
Sbjct: 148 YPPQPGYPPQQP-YPPQQPGY-PTQPGYPPQ-PGY-PAQPYPQ--QPGYPPQQPGYPPQQ 201

Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            GY P QPGY P     Y P+       PG
Sbjct: 202 PGYPPQQPGYPPQQPG-YPPQPGYPPQQPG 230

[243][TOP]
>UniRef100_UPI0001B7BF92 zinc finger protein 768 n=1 Tax=Rattus norvegicus
           RepID=UPI0001B7BF92
          Length = 570

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 34/100 (34%), Positives = 42/100 (42%), Gaps = 9/100 (9%)
 Frame = -2

Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
           F P SP        + P SP +   SP + P SP ++P SP   P SP     S  Y P 
Sbjct: 67  FEPQSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSSRYEPQ 126

Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
           SP + P S GY P  P Y P S    +         PG +
Sbjct: 127 SPGYDPKSPGYEPGSPRYEPKSPGYGSKSPEFESQSPGCE 166

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
 Frame = -2

Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPST 399
           P SP + P SP +   SP + P SP +   SP + P SP  +  SP+  P SP+F S S+
Sbjct: 62  PQSPGFEPQSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSS 121

Query: 398 GYSPSQPGYSPSS------TSQYTPKT 336
            Y P  PGY P S      + +Y PK+
Sbjct: 122 RYEPQSPGYDPKSPGYEPGSPRYEPKS 148

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 33/92 (35%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
 Frame = -2

Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           RF P SP +   SP + P SP ++P SP   P SP +   S      SP Y P SP + P
Sbjct: 80  RFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSSRYEPQSPGYDPKSPGYEP 139

Query: 404 -STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            S  Y P  PGY   S    +         PG
Sbjct: 140 GSPRYEPKSPGYGSKSPEFESQSPGCESQSPG 171

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 30/80 (37%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
 Frame = -2

Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF------ 411
           PS  ++P SP   P SP +   S  Y P SP Y P SP     SP Y P SP +      
Sbjct: 98  PSPEFAPRSPESDPQSPEFESQSSRYEPQSPGYDPKSPGYEPGSPRYEPKSPGYGSKSPE 157

Query: 410 --SPSTGYSPSQPGYSPSST 357
             S S G     PGY P ++
Sbjct: 158 FESQSPGCESQSPGYEPQNS 177

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 27/57 (47%), Positives = 28/57 (49%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           S SS Y P SP Y P SP Y P SP Y P SP Y   SP     SP     SP + P
Sbjct: 118 SQSSRYEPQSPGYDPKSPGYEPGSPRYEPKSPGYGSKSPEFESQSPGCESQSPGYEP 174

[244][TOP]
>UniRef100_Q1WKU4 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
           Tax=Drosophila erecta RepID=Q1WKU4_DROER
          Length = 760

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
 Frame = -2

Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
           FSP    S  +P  PS+SP+        SPS+SP  P  SPSSP  + SP  P +   SP
Sbjct: 660 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 719

Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360
            YSP+SP ++ S+       YSPS P YSP+S
Sbjct: 720 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 751

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-Y 393
           SSP SP  PS SP  P+    SPSYSP+SP Y+ SSP   G SP+YSPSSP +SP++  Y
Sbjct: 698 SSPSSP-GPSMSPYFPASPSVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLY 754

Query: 392 SPSQP 378
           + + P
Sbjct: 755 ASASP 759

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 6/52 (11%)
 Frame = -2

Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSP 438
           SP  P SP+ SPSYSPTSP+Y+ +SP     +YSPSSP YSP+SP  +  SP
Sbjct: 708 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASP 759

[245][TOP]
>UniRef100_UPI000179248D PREDICTED: similar to RR2 cuticle protein 3 n=1 Tax=Acyrthosiphon
           pisum RepID=UPI000179248D
          Length = 299

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 37/78 (47%), Positives = 54/78 (69%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SPSSP +P++PS +P++PSYSP +PSYSP+ P YSP+  Y+   +P Y P+ P +SP+  
Sbjct: 29  SPSSPSAPSAPS-APSAPSYSP-APSYSPA-PLYSPAPSYSP--APAYKPA-PSYSPAPS 82

Query: 395 YSPSQPGYSPSSTSQYTP 342
           YSP+ P Y P+   +  P
Sbjct: 83  YSPA-PAYKPAPAYKPAP 99

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
 Frame = -2

Query: 575 SPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           SPS+P    +P++PSYSP +PSYSP +P YSP +P+YSP+  Y    +P YSP +P +SP
Sbjct: 32  SPSAPSAPSAPSAPSYSP-APSYSP-APLYSP-APSYSPAPAYK--PAPSYSP-APSYSP 85

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           +  Y P+ P Y P+ + + +P
Sbjct: 86  APAYKPA-PAYKPAPSYKPSP 105

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 36/77 (46%), Positives = 54/77 (70%)
 Frame = -2

Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
           PS P SP+SPS +P++PS +P++PSYSP +P+YSP+  Y+   +P YSP +P + P+  Y
Sbjct: 25  PSYP-SPSSPS-APSAPS-APSAPSYSP-APSYSPAPLYS--PAPSYSP-APAYKPAPSY 77

Query: 392 SPSQPGYSPSSTSQYTP 342
           SP+ P YSP+   +  P
Sbjct: 78  SPA-PSYSPAPAYKPAP 93

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 35/75 (46%), Positives = 49/75 (65%)
 Frame = -2

Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
           +SP+  YSP +P YSP +PSYSP +P+Y P +P+YSP+  Y+   +P Y P +P + P+ 
Sbjct: 47  YSPAPSYSP-APLYSP-APSYSP-APAYKP-APSYSPAPSYS--PAPAYKP-APAYKPAP 99

Query: 398 GYSPSQPGYSPSSTS 354
            Y PS P YS  S S
Sbjct: 100 SYKPS-PSYSAPSYS 113

[246][TOP]
>UniRef100_C4WTF5 ACYPI006712 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WTF5_ACYPI
          Length = 304

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 37/78 (47%), Positives = 54/78 (69%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SPSSP +P++PS +P++PSYSP +PSYSP+ P YSP+  Y+   +P Y P+ P +SP+  
Sbjct: 29  SPSSPSAPSAPS-APSAPSYSP-APSYSPA-PLYSPAPSYSP--APAYKPA-PSYSPAPS 82

Query: 395 YSPSQPGYSPSSTSQYTP 342
           YSP+ P Y P+   +  P
Sbjct: 83  YSPA-PAYKPAPAYKPAP 99

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
 Frame = -2

Query: 575 SPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           SPS+P    +P++PSYSP +PSYSP +P YSP +P+YSP+  Y    +P YSP +P +SP
Sbjct: 32  SPSAPSAPSAPSAPSYSP-APSYSP-APLYSP-APSYSPAPAYK--PAPSYSP-APSYSP 85

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           +  Y P+ P Y P+ + + +P
Sbjct: 86  APAYKPA-PAYKPAPSYKPSP 105

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 36/77 (46%), Positives = 54/77 (70%)
 Frame = -2

Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
           PS P SP+SPS +P++PS +P++PSYSP +P+YSP+  Y+   +P YSP +P + P+  Y
Sbjct: 25  PSYP-SPSSPS-APSAPS-APSAPSYSP-APSYSPAPLYS--PAPSYSP-APAYKPAPSY 77

Query: 392 SPSQPGYSPSSTSQYTP 342
           SP+ P YSP+   +  P
Sbjct: 78  SPA-PSYSPAPAYKPAP 93

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 35/75 (46%), Positives = 49/75 (65%)
 Frame = -2

Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
           +SP+  YSP +P YSP +PSYSP +P+Y P +P+YSP+  Y+   +P Y P +P + P+ 
Sbjct: 47  YSPAPSYSP-APLYSP-APSYSP-APAYKP-APSYSPAPSYS--PAPAYKP-APAYKPAP 99

Query: 398 GYSPSQPGYSPSSTS 354
            Y PS P YS  S S
Sbjct: 100 SYKPS-PSYSAPSYS 113

[247][TOP]
>UniRef100_C4WTF4 ACYPI006712 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WTF4_ACYPI
          Length = 299

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 37/78 (47%), Positives = 54/78 (69%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
           SPSSP +P++PS +P++PSYSP +PSYSP+ P YSP+  Y+   +P Y P+ P +SP+  
Sbjct: 29  SPSSPSAPSAPS-APSAPSYSP-APSYSPA-PLYSPAPSYSP--APAYKPA-PSYSPAPS 82

Query: 395 YSPSQPGYSPSSTSQYTP 342
           YSP+ P Y P+   +  P
Sbjct: 83  YSPA-PAYKPAPAYKPAP 99

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
 Frame = -2

Query: 575 SPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
           SPS+P    +P++PSYSP +PSYSP +P YSP +P+YSP+  Y    +P YSP +P +SP
Sbjct: 32  SPSAPSAPSAPSAPSYSP-APSYSP-APLYSP-APSYSPAPAYK--PAPSYSP-APSYSP 85

Query: 404 STGYSPSQPGYSPSSTSQYTP 342
           +  Y P+ P Y P+ + + +P
Sbjct: 86  APAYKPA-PAYKPAPSYKPSP 105

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 36/77 (46%), Positives = 54/77 (70%)
 Frame = -2

Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
           PS P SP+SPS +P++PS +P++PSYSP +P+YSP+  Y+   +P YSP +P + P+  Y
Sbjct: 25  PSYP-SPSSPS-APSAPS-APSAPSYSP-APSYSPAPLYS--PAPSYSP-APAYKPAPSY 77

Query: 392 SPSQPGYSPSSTSQYTP 342
           SP+ P YSP+   +  P
Sbjct: 78  SPA-PSYSPAPAYKPAP 93

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 35/75 (46%), Positives = 49/75 (65%)
 Frame = -2

Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
           +SP+  YSP +P YSP +PSYSP +P+Y P +P+YSP+  Y+   +P Y P +P + P+ 
Sbjct: 47  YSPAPSYSP-APLYSP-APSYSP-APAYKP-APSYSPAPSYS--PAPAYKP-APAYKPAP 99

Query: 398 GYSPSQPGYSPSSTS 354
            Y PS P YS  S S
Sbjct: 100 SYKPS-PSYSAPSYS 113

[248][TOP]
>UniRef100_O04142 DNA-directed RNA polymerase (Fragment) n=1 Tax=Porphyra yezoensis
            RepID=O04142_PORYE
          Length = 1685

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 23/105 (21%)
 Frame = -2

Query: 581  RFSPSSP-YSPTSP---------------SYSPTSPSYSPTSPS--YSPSSPTYSPSSPY 456
            R SP+SP Y+  SP               +Y+P SP+Y  TSP   YSPS+P  + SSP 
Sbjct: 1548 RMSPASPGYAAMSPRFGGGLCGGPAGGAGAYAPASPAYMATSPGMGYSPSTPALAVSSP- 1606

Query: 455  NSGTSPDYSPSSPQFS----PSTGY-SPSQPGYSPSSTSQYTPKT 336
              G SP YSP+SP       P+ GY SP  PGY P+S +   P T
Sbjct: 1607 --GYSPGYSPTSPSVGARGGPAAGYASPQSPGYVPTSPAYARPGT 1649

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 21/94 (22%)
 Frame = -2

Query: 578  FSPSSP-YSPTSPS--YSPTSPSYSPTSPSYSPSSPTYSPSSP-----------YNSGTS 441
            ++P+SP Y  TSP   YSP++P+ + +SP YSP    YSP+SP           Y S  S
Sbjct: 1578 YAPASPAYMATSPGMGYSPSTPALAVSSPGYSPG---YSPTSPSVGARGGPAAGYASPQS 1634

Query: 440  PDYSPSSPQFS-PST------GYSPSQPGYSPSS 360
            P Y P+SP ++ P T       YSPS P YSPSS
Sbjct: 1635 PGYVPTSPAYARPGTVVAAANVYSPSSPAYSPSS 1668

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 18/96 (18%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYS----PSSPYNSGTSPDYSPSSPQF- 411
            SP   YSP++P+ + +SP YSP    YSP+SP+      P++ Y S  SP Y P+SP + 
Sbjct: 1589 SPGMGYSPSTPALAVSSPGYSP---GYSPTSPSVGARGGPAAGYASPQSPGYVPTSPAYA 1645

Query: 410  ------------SPST-GYSPSQPGYSPSSTSQYTP 342
                        SPS+  YSPS P Y+ +S+  Y P
Sbjct: 1646 RPGTVVAAANVYSPSSPAYSPSSPNYAAASSPAYQP 1681

[249][TOP]
>UniRef100_C4XYJ5 Predicted protein n=1 Tax=Clavispora lusitaniae ATCC 42720
           RepID=C4XYJ5_CLAL4
          Length = 953

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 49/95 (51%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSPYNSGT-----SPDYSPSSP 417
           SP SP SP+SPS SP SPS SP+SP  S SP SP  SP SP  SG+     SP  SPSSP
Sbjct: 703 SPGSPGSPSSPSGSPGSPS-SPSSPGASGSPGSPG-SPGSPGASGSPGSPGSPG-SPSSP 759

Query: 416 QFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
             SP +  SPS PG S S  S  +P +      PG
Sbjct: 760 SGSPGSPSSPSSPGASGSPGSPGSPGSPGASGAPG 794

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 49/113 (43%), Positives = 56/113 (49%), Gaps = 24/113 (21%)
 Frame = -2

Query: 575 SPSSPYSPTSP--SYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGT------------ 444
           SP SP SP SP  S SP SP    SP+SPS SP SP+ SPSSP  SG+            
Sbjct: 639 SPGSPGSPGSPGASGSPGSPGSPGSPSSPSGSPGSPS-SPSSPGASGSPGSPGSPGSPGA 697

Query: 443 --------SPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
                   SP  SPSSP  SP +  SPS PG S S  S  +P +      PG+
Sbjct: 698 SGSPGSPGSPG-SPSSPSGSPGSPSSPSSPGASGSPGSPGSPGSPGASGSPGS 749

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 50/94 (53%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
 Frame = -2

Query: 575 SPSSPYSPTSP--SYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGT--SPDYSPSSPQ 414
           SP SP SP SP  S SP SP    SP+SPS SP SP+ SPSSP  SG+  SP  SP SP 
Sbjct: 685 SPGSPGSPGSPGASGSPGSPGSPGSPSSPSGSPGSPS-SPSSPGASGSPGSPG-SPGSPG 742

Query: 413 FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
            S S G SP  PG SPSS S  +P +  +   PG
Sbjct: 743 ASGSPG-SPGSPG-SPSSPSG-SPGSPSSPSSPG 773

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 47/95 (49%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
           SP SP SP+SPS SP SP     S SP SP  SP SP  SPSSP +S +    SP SP  
Sbjct: 521 SPGSPGSPSSPSGSPGSPGSPGASGSPGSPG-SPGSPG-SPSSPGSSESGSPGSPGSPGA 578

Query: 410 SPSTGY--SPSQPGYSPSSTSQYTPKTNDNKDDPG 312
           S S G   SP  PG SPSS S  +P +  +   PG
Sbjct: 579 SGSPGSPGSPGSPG-SPSSPSG-SPGSPSSPGSPG 611

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 41/91 (45%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPS 402
           SP SP SP SP  SP+SP  S +    SP SP  + SP SP + G SP  SPSSP  SP 
Sbjct: 546 SPGSPGSPGSPG-SPSSPGSSESGSPGSPGSPGASGSPGSPGSPG-SPG-SPSSPSGSPG 602

Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
           +  SP  PG S S  S  +P +      PG+
Sbjct: 603 SPSSPGSPGASGSPGSPGSPGSPGASGAPGS 633

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 49/119 (41%), Positives = 55/119 (46%), Gaps = 30/119 (25%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSP--SYSPSSP-----------------------TYS 471
           SP SP SP+SPS SP SPS SP SP  S SP SP                         S
Sbjct: 587 SPGSPGSPSSPSGSPGSPS-SPGSPGASGSPGSPGSPGSPGASGAPGSPGSPGSPGSPGS 645

Query: 470 PSSPYNSGT-----SPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
           P SP  SG+     SP  SPSSP  SP +  SPS PG S S  S  +P +      PG+
Sbjct: 646 PGSPGASGSPGSPGSPG-SPSSPSGSPGSPSSPSSPGASGSPGSPGSPGSPGASGSPGS 703

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 46/95 (48%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
 Frame = -2

Query: 575 SPSSPYSPTSP--SYSPTSPSYSPTSP--SYSPSSP--TYSPSSPYNSGTSPDYSPSSPQ 414
           SP SP SP+SP  S SP SP  SP SP  S SP SP    SPSSP  S  SP  SPSSP 
Sbjct: 716 SPGSPSSPSSPGASGSPGSPG-SPGSPGASGSPGSPGSPGSPSSPSGSPGSPS-SPSSPG 773

Query: 413 FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
            S S G SP  PG   +S +   P +  +   PG+
Sbjct: 774 ASGSPG-SPGSPGSPGASGAPGAPGSPGSPGSPGS 807

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 45/111 (40%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
 Frame = -2

Query: 575  SPSSPYSPTSPSYSPTSPSYSPTSP--SYSPSSPTY--------------------SPSS 462
            SP SP SP+SPS SP SPS SP+SP  S SP SP                      SP S
Sbjct: 749  SPGSPGSPSSPSGSPGSPS-SPSSPGASGSPGSPGSPGSPGASGAPGAPGSPGSPGSPGS 807

Query: 461  PYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
            P + G+S   SPSSP  S S   SPS    SPS++   +P ++ +   PG+
Sbjct: 808  PSSPGSSESGSPSSP--SASESGSPS----SPSASESGSPGSSGSPGSPGS 852

[250][TOP]
>UniRef100_A9S7U4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9S7U4_PHYPA
          Length = 296

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 41/82 (50%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
 Frame = -2

Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS----SPQFSP 405
           PS P  P SP Y   SP Y+  SP Y   SP YSPS  Y S  SP YSPS    SP +SP
Sbjct: 215 PSCPPPPESPVYE--SPPYASPSPVYE--SPPYSPSPVYESPPSPTYSPSPVYKSPTYSP 270

Query: 404 STGY-SPSQPGYSPSSTSQYTP 342
           S  Y SP  P YSPS   +  P
Sbjct: 271 SPVYKSPPSPSYSPSPVYKSPP 292

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 35/64 (54%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
 Frame = -2

Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPS----SPTYSPSSPYNSGTSPDYSPSSPQFS 408
           SPS  Y   SP YSP+    SP SP+YSPS    SPTYSPS  Y S  SP YSPS    S
Sbjct: 233 SPSPVYE--SPPYSPSPVYESPPSPTYSPSPVYKSPTYSPSPVYKSPPSPSYSPSPVYKS 290

Query: 407 PSTG 396
           P  G
Sbjct: 291 PPAG 294

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 38/71 (53%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
 Frame = -2

Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---SPDY-SPSSPQFSPS 402
           S PY+  SP Y   SP YSP+    SP SPTYSPS  Y S T   SP Y SP SP +SPS
Sbjct: 228 SPPYASPSPVYE--SPPYSPSPVYESPPSPTYSPSPVYKSPTYSPSPVYKSPPSPSYSPS 285

Query: 401 TGY-SPSQPGY 372
             Y SP   GY
Sbjct: 286 PVYKSPPAGGY 296