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[1][TOP]
>UniRef100_Q99367 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99367_SOYBN
Length = 494
Score = 177 bits (450), Expect = 4e-43
Identities = 84/92 (91%), Positives = 88/92 (95%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
R SPSSPYSPTSP+YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG SPDYSPSSPQFSPS
Sbjct: 404 RLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 463
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
TGYSPSQPGYSPSSTSQYTP+T+D KDD GT+
Sbjct: 464 TGYSPSQPGYSPSSTSQYTPQTSD-KDDGGTR 494
Score = 118 bits (295), Expect = 4e-25
Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 301 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 360
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S GYSP+ P YSP+S S Y+P
Sbjct: 361 SPGYSPTSPSYSPTSPS-YSP 380
Score = 117 bits (293), Expect = 6e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 294 YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 353
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ PGYSP+S S Y+P
Sbjct: 354 SPAYSPTSPGYSPTSPS-YSP 373
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 252 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 311
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 312 SPAYSPTSPSYSPTSPS-YSP 331
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 273 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 332
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 333 SPSYSPTSPSYSPTSPS-YSP 352
Score = 116 bits (291), Expect = 1e-24
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 266 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPT 325
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 326 SPSYSPTSPSYSPTSPS-YSP 345
Score = 116 bits (290), Expect = 1e-24
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 259 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPT 318
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 319 SPSYSPTSPSYSPTSPS-YSP 338
Score = 115 bits (288), Expect = 2e-24
Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP
Sbjct: 217 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 276
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 277 SPSYSPTSPSYSPTSPS-YSP 296
Score = 115 bits (288), Expect = 2e-24
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 315 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 374
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P Y+P S ++Y+P + P
Sbjct: 375 SPSYSPTSPSYNPQS-AKYSPSLAYSPSSP 403
Score = 113 bits (282), Expect = 1e-23
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 245 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 304
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 305 SPAYSPTSPAYSPTSPS-YSP 324
Score = 111 bits (278), Expect = 4e-23
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+P S ++SPS
Sbjct: 336 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 395
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSPS P SPS S Y+P
Sbjct: 396 LAYSPSSPRLSPS--SPYSP 413
Score = 110 bits (276), Expect = 6e-23
Identities = 53/81 (65%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 238 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 297
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 298 SPSYSPTSPAYSPTSPA-YSP 317
Score = 105 bits (263), Expect = 2e-21
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
FSP+S YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP
Sbjct: 202 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 261
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 262 TSPAYSPTSPSYSPTSPS-YSP 282
Score = 89.0 bits (219), Expect = 2e-16
Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 12/90 (13%)
Frame = -2
Query: 575 SPSSPYSPTSPS----------YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
SP+ SPTS + +SPTS P YSP+SP YSPSSP YSP+SP S TSP YS
Sbjct: 180 SPNLRLSPTSDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYS 239
Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P+SP +SP S YSPS PGYSP+S + Y+P
Sbjct: 240 PTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 268
[2][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
binding / DNA-directed RNA polymerase n=1 Tax=Vitis
vinifera RepID=UPI0001985649
Length = 1848
Score = 162 bits (411), Expect = 1e-38
Identities = 76/92 (82%), Positives = 83/92 (90%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
R SPSSPYSPTSP+YSPTSPSYSPTSPSYSP+SPTYSP+SPYNSG SPDYSPSSPQ+SPS
Sbjct: 1758 RLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPS 1817
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
GYSPS PGYSPSSTSQYTP+ + NKD+ Q
Sbjct: 1818 AGYSPSAPGYSPSSTSQYTPQMS-NKDNGSPQ 1848
Score = 118 bits (295), Expect = 4e-25
Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1655 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1714
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S GYSP+ P YSP+S S Y+P
Sbjct: 1715 SPGYSPTSPSYSPTSPS-YSP 1734
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPT 1665
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1666 SPAYSPTSPSYSPTSPS-YSP 1685
Score = 117 bits (293), Expect = 6e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1648 YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1707
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ PGYSP+S S Y+P
Sbjct: 1708 SPAYSPTSPGYSPTSPS-YSP 1727
Score = 117 bits (292), Expect = 8e-25
Identities = 58/90 (64%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1728
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P Y+PSS ++Y+P + P
Sbjct: 1729 SPSYSPTSPSYNPSS-AKYSPSLAYSPSSP 1757
Score = 115 bits (288), Expect = 2e-24
Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP
Sbjct: 1550 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 1609
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1610 SPSYSPTSPSYSPTSPS-YSP 1629
Score = 115 bits (288), Expect = 2e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1651
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1652 SPSYSPTSPAYSPTSPA-YSP 1671
Score = 115 bits (287), Expect = 3e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1585 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1645 SPVYSPTSPSYSPTSPA-YSP 1664
Score = 114 bits (286), Expect = 4e-24
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1686
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1687 SPSYSPTSPSYSPTSPS-YSP 1706
Score = 113 bits (282), Expect = 1e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+PSS ++SPS
Sbjct: 1690 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPS 1749
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSPS P SPS S Y+P
Sbjct: 1750 LAYSPSSPRLSPS--SPYSP 1767
Score = 112 bits (279), Expect = 3e-23
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1578 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1638 SPSYSPTSPVYSPTSPS-YSP 1657
Score = 109 bits (273), Expect = 1e-22
Identities = 51/75 (68%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1571 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 404 STGYSPSQPGYSPSS 360
S YSP+ P YSP+S
Sbjct: 1631 SPSYSPTSPSYSPTS 1645
Score = 105 bits (263), Expect = 2e-21
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
FSP+S YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP
Sbjct: 1535 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 1594
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1595 TSPAYSPTSPSYSPTSPS-YSP 1615
Score = 87.0 bits (214), Expect = 9e-16
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
Frame = -2
Query: 542 SYSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369
++SPTS P YSP+SP YSPSSP YSP+SP S TSP YSP+SP +SP S YSPS PGYS
Sbjct: 1534 AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 1593
Query: 368 PSSTSQYTP 342
P+S + Y+P
Sbjct: 1594 PTSPA-YSP 1601
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Frame = -2
Query: 575 SPSSPYSP-TSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQ 414
SP+ SP T +SP ++SPTS SP YSPSSP G +SP YSP+SP
Sbjct: 1513 SPNLRLSPITDAQFSPYVGGMAFSPTS------SPGYSPSSP---GYSPSSPGYSPTSPG 1563
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKT 336
+SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPT-YSPSS 1589
[3][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SXC0_RICCO
Length = 1855
Score = 162 bits (409), Expect = 2e-38
Identities = 77/96 (80%), Positives = 82/96 (85%), Gaps = 1/96 (1%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
R SPSSPYSPTSP+YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG PDYSPSSPQ+SPS
Sbjct: 1751 RLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVGPDYSPSSPQYSPS 1810
Query: 401 TGYSPSQPGYSPSSTSQYT-PKTNDNKDDPGTQ*AR 297
GYSPS PGYSPSSTSQYT T D++ D G + R
Sbjct: 1811 AGYSPSAPGYSPSSTSQYTQTSTKDDRTDKGDRNGR 1846
Score = 118 bits (295), Expect = 4e-25
Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1648 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1707
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S GYSP+ P YSP+S S Y+P
Sbjct: 1708 SPGYSPTSPSYSPTSPS-YSP 1727
Score = 117 bits (293), Expect = 6e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1641 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ PGYSP+S S Y+P
Sbjct: 1701 SPAYSPTSPGYSPTSPS-YSP 1720
Score = 116 bits (291), Expect = 1e-24
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1651
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1652 SPAYSPTSPAYSPTSPS-YSP 1671
Score = 116 bits (290), Expect = 1e-24
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPT 1672
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1673 SPSYSPTSPSYSPTSPS-YSP 1692
Score = 115 bits (288), Expect = 2e-24
Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP
Sbjct: 1550 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 1609
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1610 SPSYSPTSPSYSPTSPS-YSP 1629
Score = 115 bits (288), Expect = 2e-24
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1721
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P Y+P S ++Y+P + P
Sbjct: 1722 SPSYSPTSPSYNPQS-AKYSPSLAYSPSSP 1750
Score = 115 bits (287), Expect = 3e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1585 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1645 SPVYSPTSPAYSPTSPA-YSP 1664
Score = 114 bits (286), Expect = 4e-24
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1679
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1680 SPSYSPTSPSYSPTSPS-YSP 1699
Score = 111 bits (278), Expect = 4e-23
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+P S ++SPS
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 1742
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSPS P SPS S Y+P
Sbjct: 1743 LAYSPSSPRLSPS--SPYSP 1760
Score = 110 bits (276), Expect = 6e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1578 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1638 SPSYSPTSPVYSPTSPA-YSP 1657
Score = 109 bits (273), Expect = 1e-22
Identities = 51/75 (68%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1571 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 404 STGYSPSQPGYSPSS 360
S YSP+ P YSP+S
Sbjct: 1631 SPSYSPTSPSYSPTS 1645
Score = 107 bits (267), Expect = 7e-22
Identities = 64/117 (54%), Positives = 72/117 (61%), Gaps = 28/117 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSY-------------SPSSPTYSPSSPYNSGTS 441
+SP+SP YSPTSPSYSPTSPSYSPTSPSY SPSSP SPSSPY S TS
Sbjct: 1704 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPY-SPTS 1762
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPS-------------STSQYTPKTNDNKDDPG 312
P+YSP+SP +SP S YSPS P YSPS S+ QY+P + PG
Sbjct: 1763 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVGPDYSPSSPQYSPSAGYSPSAPG 1819
Score = 104 bits (260), Expect = 4e-21
Identities = 55/82 (67%), Positives = 64/82 (78%), Gaps = 3/82 (3%)
Frame = -2
Query: 578 FSPS-SP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
FSP+ SP YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP
Sbjct: 1535 FSPTLSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 1594
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1595 TSPAYSPTSPSYSPTSPS-YSP 1615
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/87 (59%), Positives = 61/87 (70%), Gaps = 7/87 (8%)
Frame = -2
Query: 581 RFSPS-----SPYSPTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
R SP+ SPY P +SPT SP YSP+SP YSPSSP YSP+SP S TSP YSP+S
Sbjct: 1517 RLSPTTDAQFSPYVSGMP-FSPTLSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTS 1575
Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTP 342
P +SP S YSPS PGYSP+S + Y+P
Sbjct: 1576 PGYSPTSPTYSPSSPGYSPTSPA-YSP 1601
Score = 72.0 bits (175), Expect = 3e-11
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
Frame = -2
Query: 575 SPSSPYSPTSPS-YSP--TSPSYSPT-SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
SPS SPT+ + +SP + +SPT SP YSPSSP YSPSSP YSP+SP +S
Sbjct: 1513 SPSLRLSPTTDAQFSPYVSGMPFSPTLSPGYSPSSPGYSPSSP-------GYSPTSPGYS 1565
Query: 407 P-STGYSPSQPGYSPSSTSQYTPKT 336
P S GYSP+ PGYSP+S + Y+P +
Sbjct: 1566 PTSPGYSPTSPGYSPTSPT-YSPSS 1589
[4][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99368_SOYBN
Length = 977
Score = 157 bits (396), Expect = 7e-37
Identities = 74/87 (85%), Positives = 80/87 (91%), Gaps = 1/87 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SPSSP SPTSP+YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG SPDYSP+SPQFSPS
Sbjct: 891 YSPSSPRLSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPTSPQFSPS 950
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKD 321
GYSPSQPGYSPSSTSQ TP+T+D +
Sbjct: 951 AGYSPSQPGYSPSSTSQDTPQTSDKDE 977
Score = 110 bits (276), Expect = 6e-23
Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP YSPTSP YSPTSP+YSPSSP YSP+SP S TSP YSP+SP +SP
Sbjct: 738 YSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPT 797
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YS + P YSP+S S Y+P
Sbjct: 798 SPAYSSTSPAYSPTSPS-YSP 817
Score = 110 bits (276), Expect = 6e-23
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YS TSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 787 YSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPT 846
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 847 SPSYSPTSPAYSPTSPS-YSP 866
Score = 109 bits (273), Expect = 1e-22
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSP+SP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP
Sbjct: 731 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 790
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YS S++ Y+P
Sbjct: 791 SPAYSPTSPAYS-STSPAYSP 810
Score = 109 bits (273), Expect = 1e-22
Identities = 56/90 (62%), Positives = 68/90 (75%), Gaps = 9/90 (10%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTSPSYSPTSP+YSPTSPSYS +SP+YSP+SP S TSP YSP+
Sbjct: 794 YSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPT 853
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
SP +SP S YSP+ P YSP+S S Y P++
Sbjct: 854 SPAYSPTSPSYSPTSPSYSPTSPS-YNPQS 882
Score = 108 bits (271), Expect = 2e-22
Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 759 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPT 818
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YS +S S Y+P
Sbjct: 819 SPAYSPTSPSYSLTSPS-YSP 838
Score = 105 bits (263), Expect = 2e-21
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYS TSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 815 YSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 874
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S Y+P YSPS Y+P +
Sbjct: 875 SPSYNPQSAKYSPSLA--YSPSS 895
Score = 102 bits (255), Expect = 2e-20
Identities = 50/76 (65%), Positives = 59/76 (77%), Gaps = 3/76 (3%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
FSPSS YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S +SP YSP+SP +SP
Sbjct: 723 FSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 782
Query: 404 -STGYSPSQPGYSPSS 360
S YSP+ P YSP+S
Sbjct: 783 TSPSYSPTSPAYSPTS 798
Score = 99.0 bits (245), Expect = 2e-19
Identities = 56/88 (63%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP+YSPTSPSYSPTSP+YSP+SP YS +SP S TSP YSP+SP +SP
Sbjct: 766 YSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPT 825
Query: 404 STGYS---PSQP----GYSPSSTSQYTP 342
S YS PS YSP+S S Y+P
Sbjct: 826 SPSYSLTSPSYSPTSPSYSPTSPS-YSP 852
Score = 90.1 bits (222), Expect = 1e-16
Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 6/86 (6%)
Frame = -2
Query: 581 RFSPSSP--YSPT--SPSYSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
R SPSS +SP ++SP+S P YSP+SP YSPSSP YSP+SP S TSP YSP+SP
Sbjct: 705 RLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 764
Query: 416 QFSPST-GYSPSQPGYSPSSTSQYTP 342
+SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 765 TYSPSSPGYSPTSPAYSPTSPS-YSP 789
Score = 64.3 bits (155), Expect = 7e-09
Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPT--SPSYSPSS-PTYSPSSPYNSGTSPDYSPSSPQFSP 405
SPS SP + +SP ++SPSS P YSPSSP S +SP YSP+SP +SP
Sbjct: 695 SPSYLLSPNLRLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSP 754
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S GYSP+ P YSPSS Y+P
Sbjct: 755 TSPGYSPTSPTYSPSSPG-YSP 775
Score = 55.1 bits (131), Expect = 4e-06
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = -2
Query: 527 SPSY--SPT---SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSP 366
SPSY SP SPS Y ++ +SP YSPSSP +SPS+ GYSP+ PGYSP
Sbjct: 695 SPSYLLSPNLRLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSP 754
Query: 365 SSTSQYTPKTNDNKDDPG 312
+S + PG
Sbjct: 755 TSPGYSPTSPTYSPSSPG 772
[5][TOP]
>UniRef100_Q56Z04 DNA-directed RNA polymerase II largest chain (Fragment) n=1
Tax=Arabidopsis thaliana RepID=Q56Z04_ARATH
Length = 99
Score = 143 bits (360), Expect = 1e-32
Identities = 68/90 (75%), Positives = 73/90 (81%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
R SP+SPYSPTSP+YSPTSPSYSPTSPSYSPSSPTYSPSSPY+SG SPDYSPS+
Sbjct: 5 RLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA------ 58
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
GYSP+ PGYSPSST QYTP D KD G
Sbjct: 59 -GYSPTLPGYSPSSTGQYTPHEGDKKDKTG 87
[6][TOP]
>UniRef100_A7NVN8 Chromosome chr18 scaffold_1, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7NVN8_VITVI
Length = 89
Score = 136 bits (342), Expect = 1e-30
Identities = 65/82 (79%), Positives = 72/82 (87%)
Frame = -2
Query: 551 TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGY 372
+S S SPTSPSYSPTSPSYSP+SPTYSP+SPYNSG SPDYSPSSPQ+SPS GYSPS PGY
Sbjct: 9 SSYSCSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGY 68
Query: 371 SPSSTSQYTPKTNDNKDDPGTQ 306
SPSSTSQYTP+ + NKD+ Q
Sbjct: 69 SPSSTSQYTPQMS-NKDNGSPQ 89
Score = 54.3 bits (129), Expect = 7e-06
Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = -2
Query: 578 FSPSSPY-SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SPY S SP YSP+SP YSP S YSPS+P YSPSS S +PQ S
Sbjct: 34 YSPTSPYNSGVSPDYSPSSPQYSP-SAGYSPSAPGYSPSST---------SQYTPQMSNK 83
Query: 401 TGYSP 387
SP
Sbjct: 84 DNGSP 88
[7][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FQS9_CANGA
Length = 1715
Score = 123 bits (309), Expect = 9e-27
Identities = 61/89 (68%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1686
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
S YSP+ P YSP S + Y+PK D K D
Sbjct: 1687 SPSYSPTSPSYSPGSPT-YSPKDEDEKKD 1714
Score = 118 bits (296), Expect = 3e-25
Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1543 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1602
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1603 SPSYSPTSPSYSPTSPS-YSP 1622
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1564 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1623
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1624 SPSYSPTSPSYSPTSPS-YSP 1643
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1585 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1645 SPSYSPTSPSYSPTSPS-YSP 1664
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1665
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1666 SPSYSPTSPSYSPTSPS-YSP 1685
Score = 110 bits (275), Expect = 8e-23
Identities = 55/78 (70%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
Frame = -2
Query: 569 SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
SSP +SPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1539 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598
Query: 395 YSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSPTSPS-YSP 1615
Score = 77.0 bits (188), Expect = 1e-12
Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
Frame = -2
Query: 575 SPSSPY--SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+P+SP +SP +SPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +S
Sbjct: 1529 APASPGFGGVSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-- 1586
Query: 401 TGYSPSQP----GYSPSSTSQYTP 342
YSP+S S Y+P
Sbjct: 1587 --------PTSPSYSPTSPS-YSP 1601
[8][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 122 bits (307), Expect = 2e-26
Identities = 62/90 (68%), Positives = 73/90 (81%), Gaps = 5/90 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP +SPS
Sbjct: 1637 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPS 1696
Query: 401 T-GYSPSQPGYSPSS---TSQYTPKTNDNK 324
+ YSPS P YSPSS T++Y + N+ K
Sbjct: 1697 SPSYSPSSPSYSPSSPTFTNKYNYQPNNKK 1726
Score = 120 bits (302), Expect = 6e-26
Identities = 60/83 (72%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1630 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1689
Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336
+ YSPS P YSPSS S Y+P +
Sbjct: 1690 SPSYSPSSPSYSPSSPS-YSPSS 1711
Score = 120 bits (300), Expect = 1e-25
Identities = 60/83 (72%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1623 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1682
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P YSPSS S Y+P +
Sbjct: 1683 SPSYSPSSPSYSPSSPS-YSPSS 1704
Score = 119 bits (298), Expect = 2e-25
Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP+ S TSP YSP+SP +SP
Sbjct: 1560 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPT 1619
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1620 SPSYSPTSPSYSPTSPS-YSP 1639
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1602 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1661
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1662 SPSYSPTSPSYSPTSPS-YSP 1681
Score = 115 bits (287), Expect = 3e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1581 YSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1640
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1641 SPSYSPTSPSYSPTSPS-YSP 1660
Score = 114 bits (284), Expect = 7e-24
Identities = 57/82 (69%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++ P SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1545 QYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSP 1604
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1605 TSPSYSPTSPSYSPTSPS-YSP 1625
Score = 106 bits (264), Expect = 1e-21
Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+ S Y P SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1540 YGSSYQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1599
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1600 PFYSPTSPSYSPTSPS-YSP 1618
Score = 68.9 bits (167), Expect = 3e-10
Identities = 50/129 (38%), Positives = 60/129 (46%), Gaps = 52/129 (40%)
Frame = -2
Query: 572 PSSPYSPTSPSYS----PTSPS-------------------------------------- 519
P +P S T PSYS T+P
Sbjct: 1485 PDTPGSQT-PSYSYGDGSTTPFHNPYDAPLSPFNETFRGDFSPSAMNSPGYNANKSYGSS 1543
Query: 518 ---------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369
YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YS
Sbjct: 1544 YQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYS 1603
Query: 368 PSSTSQYTP 342
P+S S Y+P
Sbjct: 1604 PTSPS-YSP 1611
[9][TOP]
>UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium
gossypii RepID=RPB1_ASHGO
Length = 1745
Score = 122 bits (307), Expect = 2e-26
Identities = 64/96 (66%), Positives = 75/96 (78%), Gaps = 6/96 (6%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDN----KDDPGT 309
S YSP+ P YSP S S Y+P N+N KD+ GT
Sbjct: 1710 SPSYSPTSPQYSPRSPS-YSPSFNNNDKEQKDENGT 1744
Score = 118 bits (296), Expect = 3e-25
Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1545 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1605 SPSYSPTSPSYSPTSPS-YSP 1624
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1647 SPSYSPTSPSYSPTSPS-YSP 1666
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 110 bits (275), Expect = 8e-23
Identities = 55/78 (70%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
Frame = -2
Query: 569 SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
SSP +SPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1541 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1600
Query: 395 YSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1601 YSPTSPSYSPTSPS-YSP 1617
[10][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YGY9_SORBI
Length = 1857
Score = 121 bits (304), Expect = 3e-26
Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 6/90 (6%)
Frame = -2
Query: 578 FSPSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS--GTSPDYSPSSP 417
+SPSSP YS TSPSYSPTSP+YSPTSPSYS SP+YSP+SP+N+ G SPDYSP+SP
Sbjct: 1766 YSPSSPRMTPYSQTSPSYSPTSPTYSPTSPSYSQPSPSYSPTSPFNTSGGPSPDYSPTSP 1825
Query: 416 QFSPSTGYSPSQPGYSPSSTSQYTPKTNDN 327
+SPS YSP+ PGYSPSST Q K +++
Sbjct: 1826 NYSPSGSYSPTAPGYSPSSTGQGNDKDDES 1855
Score = 119 bits (299), Expect = 1e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1662 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1721
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ PGYSP+S S Y+P
Sbjct: 1722 SPAYSPTSPGYSPTSPS-YSP 1741
Score = 116 bits (291), Expect = 1e-24
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1599 YSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1658
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1659 SPAYSPTSPAYSPTSPS-YSP 1678
Score = 116 bits (291), Expect = 1e-24
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1742
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y+PSS ++Y+P
Sbjct: 1743 SPSYSPTSPSYNPSS-AKYSP 1762
Score = 116 bits (290), Expect = 1e-24
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPT 1679
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1680 SPSYSPTSPSYSPTSPS-YSP 1699
Score = 114 bits (284), Expect = 7e-24
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1592 YSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1652 SPVYSPTSPAYSPTSPA-YSP 1671
Score = 114 bits (284), Expect = 7e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1648 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1707
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1708 SPSYSPTSPSYSPTSPA-YSP 1727
Score = 112 bits (281), Expect = 2e-23
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1641 YSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1701 SPSYSPTSPSYSPTSPS-YSP 1720
Score = 112 bits (279), Expect = 3e-23
Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
F+P YSP SPSYSP SPSYSPTSPSY+P SPTYSP+SP S TSP YSP+SP +SP S
Sbjct: 1558 FTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTS 1617
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1618 PSYSPTSPSYSPTSPS-YSP 1636
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1585 YTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1645 SPSYSPTSPVYSPTSPA-YSP 1664
Score = 109 bits (273), Expect = 1e-22
Identities = 53/82 (64%), Positives = 65/82 (79%), Gaps = 3/82 (3%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+PSS ++SPS
Sbjct: 1704 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPS 1763
Query: 401 TGYSPSQPGYSPSS--TSQYTP 342
YSPS P +P S + Y+P
Sbjct: 1764 HAYSPSSPRMTPYSQTSPSYSP 1785
Score = 107 bits (268), Expect = 5e-22
Identities = 50/75 (66%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP Y+P SP+YSPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1578 YSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 404 STGYSPSQPGYSPSS 360
S YSP+ P YSP+S
Sbjct: 1638 SPSYSPTSPSYSPTS 1652
Score = 107 bits (267), Expect = 7e-22
Identities = 54/75 (72%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP S TSP YSP+SP ++PS
Sbjct: 1697 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPS 1756
Query: 401 TG-YSPSQPGYSPSS 360
+ YSPS YSPSS
Sbjct: 1757 SAKYSPSH-AYSPSS 1770
Score = 104 bits (260), Expect = 4e-21
Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 9/90 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1728
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
SP +SP S YSP+ P YSP+S S Y P +
Sbjct: 1729 SPGYSPTSPSYSPTSPSYSPTSPS-YNPSS 1757
Score = 100 bits (249), Expect = 8e-20
Identities = 49/80 (61%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+SPSSP YSP SPSYSP SPSYSP+SP+Y+P SP S TSP+YSP+SP +SP S
Sbjct: 1551 YSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTS 1610
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1611 PSYSPTSPSYSPTSPS-YSP 1629
Score = 89.4 bits (220), Expect = 2e-16
Identities = 51/89 (57%), Positives = 62/89 (69%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSP-SSP--YSPTSPSYSPTSP------SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
FSP SP YSP+S YSP+SP YSP SPSYSP+SP+YSP+SP + SP YSP
Sbjct: 1535 FSPFPSPGGYSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSP 1594
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1595 TSPNYSPTSPTYSPTSPSYSPTSPS-YSP 1622
Score = 59.3 bits (142), Expect = 2e-07
Identities = 36/79 (45%), Positives = 45/79 (56%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
FSP + SP SP YSP+S YSPSSP ++P Y S SP YSP+SP
Sbjct: 1526 FSPYVGHMAFSPFPSPGG--YSPSSGGYSPSSPVFTPEKGY-SPLSPSYSPASPS----- 1577
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P Y+P S + Y+P
Sbjct: 1578 -YSPTSPSYTPGSPT-YSP 1594
Score = 58.9 bits (141), Expect = 3e-07
Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGTSPDYSPSS 420
R SP + + SP + S P+ YSPSS YSPSSP S SP YSP+S
Sbjct: 1516 RASPINTDASFSPYVGHMAFSPFPSPGGYSPSSGGYSPSSPVFTPEKGYSPLSPSYSPAS 1575
Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTP 342
P +SP S Y+P P YSP+S + Y+P
Sbjct: 1576 PSYSPTSPSYTPGSPTYSPTSPN-YSP 1601
[11][TOP]
>UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0XAQ9_CULQU
Length = 1874
Score = 121 bits (304), Expect = 3e-26
Identities = 57/80 (71%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP+SPYSPTSPSYSPTSP+YSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T
Sbjct: 1648 YSPTSPYSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPAT 1707
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSPSS Y+P
Sbjct: 1708 PSYSPTSPNYSPSS-PHYSP 1726
Score = 113 bits (283), Expect = 9e-24
Identities = 55/83 (66%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSP+SPSYSP+SP+YSP+SP S TSP+Y+P++P +SP
Sbjct: 1654 YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPT 1713
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P YSP+S S Y+P +
Sbjct: 1714 SPNYSPSSPHYSPTSPS-YSPSS 1735
Score = 113 bits (282), Expect = 1e-23
Identities = 57/97 (58%), Positives = 67/97 (69%), Gaps = 18/97 (18%)
Frame = -2
Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438
+SPSSP YSPTSPSYSPTSP+YSPTSP YSP+SP YSP+SP S TSP
Sbjct: 1560 YSPSSPNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPNYSPTSPNYSPTSP 1619
Query: 437 DYSPSSPQFSPSTGYSPSQPGYSPSS-----TSQYTP 342
YSP+SP +SP+ Y+PS P YSP+S TS Y+P
Sbjct: 1620 SYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPYSP 1656
Score = 112 bits (279), Expect = 3e-23
Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP+Y+P +PSYSP+SP YSPSSP+ S TSP YSPSSP++SP
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPT 1741
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y S QYTP
Sbjct: 1742 SPSYSPTSPSYGGS--PQYTP 1760
Score = 111 bits (278), Expect = 4e-23
Identities = 54/81 (66%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SPSYSPTSPSYSP+SP+YSP+SP + +P YSP+SP +SPS
Sbjct: 1661 YSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPS 1720
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
+ YSP+ P YSPSS +Y+P
Sbjct: 1721 SPHYSPTSPSYSPSS-PKYSP 1740
Score = 108 bits (271), Expect = 2e-22
Identities = 55/83 (66%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSPSYSPTSP+YSP+SP+YSPSSP S TSP YSP+SP +SP
Sbjct: 1641 YSPTSPSYSPTSP-YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPT 1699
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S Y+P+ P YSP+S + Y+P +
Sbjct: 1700 SPNYTPATPSYSPTSPN-YSPSS 1721
Score = 107 bits (267), Expect = 7e-22
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S +SP YSP+SP +SP
Sbjct: 1634 YAPSSPAYSPTSPSYSPTSP-YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPT 1692
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P Y+P++ S N + P
Sbjct: 1693 SPSYSPTSPNYTPATPSYSPTSPNYSPSSP 1722
Score = 105 bits (263), Expect = 2e-21
Identities = 53/81 (65%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP YSPTSPSYSP+SP YSP+SP+YSP+SP + G SP Y+P+SPQ+SP
Sbjct: 1710 YSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSP-SYGGSPQYTPASPQYSPT 1768
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPSS Q++P
Sbjct: 1769 SPKYSPTSPSYSPSS-PQHSP 1788
Score = 105 bits (262), Expect = 3e-21
Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+P +PSYSPTSP+YSP+SP YSP+SP+YSPSSP S TSP YSP+SP + S
Sbjct: 1696 YSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYGGS 1755
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S +Y+P
Sbjct: 1756 PQYTPASPQYSPTS-PKYSP 1774
Score = 103 bits (258), Expect = 7e-21
Identities = 58/95 (61%), Positives = 68/95 (71%), Gaps = 14/95 (14%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPT------SPSYSPTSPS------YSPSSPTYSPSSPYNSGTSP 438
+SP+SP YSPTSP YSPT SP+YSPTSPS YSP+SP+YSP+SP S TSP
Sbjct: 1614 YSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPYSPTSPSYSPTSPAYSPTSP 1673
Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1674 SYSPSSPSYSPTSPSYSPTSPSYSPTSPN-YTPAT 1707
Score = 101 bits (252), Expect = 4e-20
Identities = 57/106 (53%), Positives = 70/106 (66%), Gaps = 15/106 (14%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSPSYSP+SP YSPTSPSYSP+SP+Y SP + SP YSP+SP++SP
Sbjct: 1717 YSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYG-GSPQYTPASPQYSPTSPKYSPT 1775
Query: 404 STGYSPSQPGYSPSSTSQ--------YTPKT-----NDNKDDPGTQ 306
S YSPS P +SP S+ Y+P T N + PG+Q
Sbjct: 1776 SPSYSPSSPQHSPGSSGSNFMVNSPTYSPTTARYSPNMSSYSPGSQ 1821
Score = 94.7 bits (234), Expect = 5e-18
Identities = 56/98 (57%), Positives = 68/98 (69%), Gaps = 18/98 (18%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSP-------------SYSPSSPTYSPSSPYNSGT 444
R+SP+SP YSPTSP+YSPTSPSYSPTSP +YSP+SP+YSP+SPY S T
Sbjct: 1599 RYSPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPY-SPT 1657
Query: 443 SPDYSPSSPQFSPSTGYSPSQP----GYSPSSTSQYTP 342
SP YSP+SP +SP+ SPS YSP+S S Y+P
Sbjct: 1658 SPSYSPTSPAYSPT---SPSYSPSSPSYSPTSPS-YSP 1691
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/96 (54%), Positives = 64/96 (66%), Gaps = 17/96 (17%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY------SPTSPSYSPSSPTYSPSSPYNSGTSPDYSP-- 426
+SPSSP YSPTSPSYSPTSPSY +P SP YSP+SP YSP+SP S +SP +SP
Sbjct: 1731 YSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASPQYSPTSPKYSPTSPSYSPSSPQHSPGS 1790
Query: 425 -------SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
+SP +SP+T YSP+ YSP S +Y+P
Sbjct: 1791 SGSNFMVNSPTYSPTTARYSPNMSSYSPGS-QKYSP 1825
Score = 90.1 bits (222), Expect = 1e-16
Identities = 56/123 (45%), Positives = 67/123 (54%), Gaps = 35/123 (28%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSP------------------------------SY 495
+++P+SP YSPTSP YSPTSPSYSP+SP SY
Sbjct: 1757 QYTPASPQYSPTSPKYSPTSPSYSPSSPQHSPGSSGSNFMVNSPTYSPTTARYSPNMSSY 1816
Query: 494 SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPG---YSPSSTSQYTPKTNDN 327
SP S YSP+SP + TSP YSPSSP +SP+ GYSPS P YSP+S P D+
Sbjct: 1817 SPGSQKYSPTSPVYTPTSPHYSPSSPAYSPTGQGYSPSSPASPTYSPTS-----PSYEDS 1871
Query: 326 KDD 318
DD
Sbjct: 1872 VDD 1874
Score = 89.7 bits (221), Expect = 1e-16
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 12/92 (13%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSPS-----YSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP P SP+ SPSYSP+SP+Y+ SP YSP+SP+YSP+SP S TSP YSP+SP
Sbjct: 1547 SPYFPSSPSASPSYSPSSPNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPN 1606
Query: 413 FSP-STGYSPSQPGYSPSS-----TSQYTPKT 336
+SP S YSP+ P YSP+S T+ Y P +
Sbjct: 1607 YSPTSPNYSPTSPSYSPTSPLYSPTATYAPSS 1638
Score = 79.3 bits (194), Expect = 2e-13
Identities = 44/78 (56%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
P SP SP PS SP PS SPSYSPSSP Y+ +SP G SP YSP+SP +SP S
Sbjct: 1536 PGSPSSP-GPSMSPYFPSSPSASPSYSPSSPNYAAASP--GGASPGYSPTSPSYSPTSPN 1592
Query: 395 YSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S + Y+P
Sbjct: 1593 YSPTSPRYSPTSPN-YSP 1609
Score = 65.9 bits (159), Expect = 2e-09
Identities = 41/96 (42%), Positives = 53/96 (55%), Gaps = 17/96 (17%)
Frame = -2
Query: 578 FSPSSPYS---PTSPSYSPT--------SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
+SPS P S P PS+SP+ SPS+SP S S P+ SP P + SP Y
Sbjct: 1501 WSPSGPPSGMTPGGPSFSPSAQSDASGMSPSWSPMPGSPSSPGPSMSPYFPSSPSASPSY 1560
Query: 431 SPSSPQFS------PSTGYSPSQPGYSPSSTSQYTP 342
SPSSP ++ S GYSP+ P YSP+S + Y+P
Sbjct: 1561 SPSSPNYAAASPGGASPGYSPTSPSYSPTSPN-YSP 1595
[12][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
thaliana RepID=RPB1_ARATH
Length = 1840
Score = 121 bits (304), Expect = 3e-26
Identities = 61/96 (63%), Positives = 72/96 (75%), Gaps = 6/96 (6%)
Frame = -2
Query: 581 RFSPSSPYSPT----SPS--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
++SPS YSP+ SP+ YSPTSP+YSPTSPSYSP+SP+YSPSSP S +SP S +S
Sbjct: 1733 KYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 1792
Query: 419 PQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
P +SPS GYSP+ PGYSPSST QYTP D KD G
Sbjct: 1793 PDYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTG 1828
Score = 117 bits (293), Expect = 6e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ PGYSP+S S Y+P
Sbjct: 1696 SPAYSPTSPGYSPTSPS-YSP 1715
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1587 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1646
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1647 SPAYSPTSPAYSPTSPS-YSP 1666
Score = 117 bits (292), Expect = 8e-25
Identities = 56/77 (72%), Positives = 66/77 (85%), Gaps = 2/77 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1643 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1702
Query: 404 STGYSPSQPGYSPSSTS 354
S GYSP+ P YSP+S S
Sbjct: 1703 SPGYSPTSPSYSPTSPS 1719
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1580 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1640 SPAYSPTSPAYSPTSPA-YSP 1659
Score = 116 bits (290), Expect = 1e-24
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 115 bits (289), Expect = 2e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1674
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694
Score = 115 bits (288), Expect = 2e-24
Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP
Sbjct: 1545 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 1604
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1605 SPSYSPTSPSYSPTSPS-YSP 1624
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y P+ P Y+P S ++Y+P
Sbjct: 1717 SPSYGPTSPSYNPQS-AKYSP 1736
Score = 112 bits (279), Expect = 3e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1573 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1633 SPSYSPTSPAYSPTSPA-YSP 1652
Score = 110 bits (276), Expect = 6e-23
Identities = 53/81 (65%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1566 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1626 SPSYSPTSPSYSPTSPA-YSP 1645
Score = 106 bits (265), Expect = 1e-21
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
FSPSS YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S +SP YSP+SP +SP
Sbjct: 1537 FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 1596
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1597 TSPSYSPTSPSYSPTSPS-YSP 1617
Score = 105 bits (261), Expect = 3e-21
Identities = 55/100 (55%), Positives = 67/100 (67%), Gaps = 21/100 (21%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP S TSP Y P+SP +
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQ 1730
Query: 410 -----------------SPSTGYSPSQPGYSPSSTSQYTP 342
SP++ YSP+ P YSP+S S Y+P
Sbjct: 1731 SAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-YSP 1769
Score = 87.4 bits (215), Expect = 7e-16
Identities = 47/81 (58%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+FSP SPS +SP YSP+SP YSP+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1527 QFSPYVGGMAFSPS---SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 1583
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
+ GYSP+ P YSP+S S Y+P
Sbjct: 1584 SPGYSPTSPAYSPTSPS-YSP 1603
Score = 60.8 bits (146), Expect = 7e-08
Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Frame = -2
Query: 575 SPSSPYSPTSPS-YSPT--SPSYSPTS-PSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
SP+ SP S + +SP ++SP+S P YSPSSP YSP TSP YSP+SP
Sbjct: 1515 SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSP-------TSPGYSPTSP--- 1564
Query: 407 PSTGYSPSQPGYSPSSTSQYTPKT 336
GYSP+ PGYSP+S + Y+P +
Sbjct: 1565 ---GYSPTSPGYSPTSPT-YSPSS 1584
Score = 54.7 bits (130), Expect = 5e-06
Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG------TSPDYSPSSPQFSP 405
SP S T SP+Y SP+ S + + SPY G +SP YSPSSP +SP
Sbjct: 1496 SPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSP 1554
Query: 404 -STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
S GYSP+ PGYSP+S + PG
Sbjct: 1555 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG 1586
[13][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA
Length = 1943
Score = 121 bits (303), Expect = 4e-26
Identities = 60/82 (73%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1689 RYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSP 1748
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ PGYSPSS +Y+P
Sbjct: 1749 TSPSYSPASPGYSPSS-PRYSP 1769
Score = 118 bits (295), Expect = 4e-25
Identities = 60/83 (72%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSPSSP S TSP YSP+SP +SPS
Sbjct: 1774 YSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPTYSPTSPAYSPS 1833
Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336
+ YSPS P YSPSS QYTP +
Sbjct: 1834 SPQYSPSSPQYSPSS-PQYTPSS 1855
Score = 117 bits (292), Expect = 8e-25
Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP+YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSPSSP++SP
Sbjct: 1760 YSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPT 1819
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSPSS QY+P +
Sbjct: 1820 SPTYSPTSPAYSPSS-PQYSPSS 1841
Score = 115 bits (288), Expect = 2e-24
Identities = 59/81 (72%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPSSP S TSP YSP+SP +SP
Sbjct: 1725 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPT 1784
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1785 SPAYSPTSPTYSPTSPS-YSP 1804
Score = 113 bits (282), Expect = 1e-23
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSPSSP++SP
Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPT 1770
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1771 SPAYSPTSPTYSPTSPA-YSP 1790
Score = 112 bits (279), Expect = 3e-23
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP SP YSP+SP YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP
Sbjct: 1746 YSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPA 1805
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S GYSPS P YSP+S + Y+P
Sbjct: 1806 SPGYSPSSPRYSPTSPT-YSP 1825
Score = 110 bits (276), Expect = 6e-23
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP
Sbjct: 1718 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPT 1777
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1778 SPTYSPTSPAYSPTSPT-YSP 1797
Score = 108 bits (271), Expect = 2e-22
Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 1/82 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSP+SP YSPTSP+YSPTSP+YSPSSP YSPSSP S +SP Y+PSSP S
Sbjct: 1802 YSPASPGYSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDAS 1861
Query: 401 TGYSPSQPGYSPSSTSQYTPKT 336
YSP+ P YSPSS +Y+P +
Sbjct: 1862 PAYSPTSPQYSPSS-PRYSPSS 1882
Score = 108 bits (271), Expect = 2e-22
Identities = 58/93 (62%), Positives = 68/93 (73%), Gaps = 13/93 (13%)
Frame = -2
Query: 581 RFSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS-----P 438
+++PSSP YSPTSP YSP+SP YSP+SP YSP+SP YSPSSP +GTS P
Sbjct: 1850 QYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSP 1909
Query: 437 DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSPSSPQ+SPS+ YSPS P YSPSS QY+P
Sbjct: 1910 QYSPSSPQYSPSSPQYSPSSPQYSPSS-PQYSP 1941
Score = 108 bits (269), Expect = 4e-22
Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 8/89 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GTSPDYSPSS 420
+SPSSP YSPTSP+YSPTSP+YSP+SP YSPSSP YSPSSP + SP YSP+S
Sbjct: 1809 YSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTS 1868
Query: 419 PQFSPST-GYSPSQPGYSPSSTSQYTPKT 336
PQ+SPS+ YSPS P YSP+S QY+P +
Sbjct: 1869 PQYSPSSPRYSPSSPQYSPTS-PQYSPSS 1896
Score = 106 bits (265), Expect = 1e-21
Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
SP+SPY +SP+Y SP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1671 SPASPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1730
Query: 398 GYSPSQPGYSPSSTSQYTP 342
GYSP+ P YSP+S S Y+P
Sbjct: 1731 GYSPTSPSYSPTSPS-YSP 1748
Score = 102 bits (254), Expect = 2e-20
Identities = 59/102 (57%), Positives = 69/102 (67%), Gaps = 20/102 (19%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP- 426
++SPSSP YSP+SP Y+P+SP+ YSPTSP YSPSSP YSPSSP S TSP YSP
Sbjct: 1836 QYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPS 1895
Query: 425 -----------SSPQFSPST-GYSPSQPGYSPSSTSQYTPKT 336
SSPQ+SPS+ YSPS P YSPSS QY+P +
Sbjct: 1896 SPGGAGTSYSRSSPQYSPSSPQYSPSSPQYSPSS-PQYSPSS 1936
Score = 102 bits (253), Expect = 3e-20
Identities = 55/94 (58%), Positives = 67/94 (71%), Gaps = 13/94 (13%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPT------SPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
+SPSSP YSP+SP YSP+SP Y+P+ SP+YSP+SP YSPSSP S +SP YSP+S
Sbjct: 1830 YSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTS 1889
Query: 419 PQFSPS------TGYSPSQPGYSPSSTSQYTPKT 336
PQ+SPS T YS S P YSPSS QY+P +
Sbjct: 1890 PQYSPSSPGGAGTSYSRSSPQYSPSS-PQYSPSS 1922
Score = 92.8 bits (229), Expect = 2e-17
Identities = 49/80 (61%), Positives = 60/80 (75%), Gaps = 4/80 (5%)
Frame = -2
Query: 569 SSP-YSPTSPS--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SSP YSPTSP+ Y +SP+Y SP YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1663 SSPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1722
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ PGYSP+S S Y+P
Sbjct: 1723 PSYSPTSPGYSPTSPS-YSP 1741
Score = 75.5 bits (184), Expect = 3e-12
Identities = 43/86 (50%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSP-----TSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSP 417
S + YSP + Y +SP YSPTSP+ Y SSP Y SP S TSP YSP+SP
Sbjct: 1643 SGAGAYSPAASDYGSGLEGLSSPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSP 1702
Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1703 SYSPTSPSYSPTSPSYSPTSPS-YSP 1727
[14][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GID7_PICST
Length = 1739
Score = 120 bits (302), Expect = 6e-26
Identities = 62/98 (63%), Positives = 74/98 (75%), Gaps = 11/98 (11%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1700
Query: 404 STGYSPSQPGYSPSST---------SQYTPKTNDNKDD 318
S YSP+ P YSP+S S +PKT D K++
Sbjct: 1701 SPSYSPTSPQYSPTSPQYSPGSPEYSPNSPKTEDKKNE 1738
Score = 119 bits (297), Expect = 2e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1693
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1694 SPQYSPTSPSYSPTS-PQYSP 1713
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1673 SPSYSPTSPSYSPTS-PQYSP 1692
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1571 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1652 SPSYSPTSPSYSPTSPS-YSP 1671
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1564 YSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1623
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1624 SPSYSPTSPSYSPTSPS-YSP 1643
Score = 112 bits (280), Expect = 2e-23
Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1547 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1606
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1607 SPTSPSYSPTSPS-YSP 1622
Score = 108 bits (269), Expect = 4e-22
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
S S Y TSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1538 SVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1597
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1598 SYSPTSPSYSPTSPS-YSP 1615
Score = 89.0 bits (219), Expect = 2e-16
Identities = 53/94 (56%), Positives = 62/94 (65%), Gaps = 17/94 (18%)
Frame = -2
Query: 572 PSSPYSPTSP-SYSP---------------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
P+SP S TSP SY TSPSYSPTSPSYSP+SP+YSP+SP S TS
Sbjct: 1517 PTSP-SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1575
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1576 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1608
Score = 88.6 bits (218), Expect = 3e-16
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Frame = -2
Query: 575 SPSSPYS--PTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
S +SP+S TSPS+ + SP Y TSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1521 SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSP 1580
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1581 TSPSYSPTSPSYSPTSPS-YSP 1601
Score = 62.8 bits (151), Expect = 2e-08
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Frame = -2
Query: 551 TSPSYSPTSPSYSPTSP-SYSPSSPTYSPS-SPYNSGTSPDYSPSSPQFSP-STGYSPSQ 381
TS PTSPS TSP SY +SP++ S SP GTSP YSP+SP +SP S YSP+
Sbjct: 1511 TSYGGQPTSPS--ATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTS 1568
Query: 380 PGYSPSSTSQYTP 342
P YSP+S + Y+P
Sbjct: 1569 PSYSPTSPA-YSP 1580
[15][TOP]
>UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1
Tax=Pichia guilliermondii RepID=RPB1_PICGU
Length = 1579
Score = 120 bits (302), Expect = 6e-26
Identities = 61/94 (64%), Positives = 73/94 (77%), Gaps = 8/94 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1483 YSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1542
Query: 404 STGYSPSQPGYSPSS------TSQYTPKTNDNKD 321
S YSP+ P YSP+S + Y+P ND+KD
Sbjct: 1543 SPAYSPTSPQYSPNSPQYSPRSPLYSPDQNDDKD 1576
Score = 118 bits (295), Expect = 4e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1462 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPT 1521
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1522 SPSYSPTSPSYSPTS-PQYSP 1541
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1399 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1458
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1459 SPSYSPTSPSYSPTSPS-YSP 1478
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1420 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1479
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1480 SPSYSPTSPSYSPTSPS-YSP 1499
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+
Sbjct: 1441 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1500
Query: 401 TG-YSPSQPGYSPSSTSQYTP 342
+ YSP+ P YSP+S S Y+P
Sbjct: 1501 SPLYSPTSPSYSPTSPS-YSP 1520
Score = 112 bits (281), Expect = 2e-23
Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1382 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1441
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1442 SPTSPSYSPTSPS-YSP 1457
Score = 106 bits (264), Expect = 1e-21
Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S Y TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1375 SPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1434
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1435 SPTSPSYSPTSPS-YSP 1450
Score = 98.6 bits (244), Expect = 3e-19
Identities = 51/88 (57%), Positives = 61/88 (69%), Gaps = 10/88 (11%)
Frame = -2
Query: 575 SPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
SP+SP Y SP Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+
Sbjct: 1357 SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1416
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1417 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1443
Score = 88.2 bits (217), Expect = 4e-16
Identities = 47/79 (59%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = -2
Query: 572 PSSPYSPTSP-SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
P SP SPTSP +Y TSP+Y SP Y +SPTYSP+SP S TSP YSP+SP +SP S
Sbjct: 1353 PGSP-SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 1411
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1412 SYSPTSPSYSPTSPS-YSP 1429
[16][TOP]
>UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 2 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270E9
Length = 2014
Score = 120 bits (301), Expect = 8e-26
Identities = 61/81 (75%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSPSSPQ+SP
Sbjct: 1699 YSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP P YSPSS S Y+P
Sbjct: 1759 SPAYSPQSPSYSPSSPS-YSP 1778
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1615 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPSYSPTSPS-YSP 1701
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPKYSPTSPS-YSP 1743
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 401 TG-YSPSQPGYSPSSTSQYTP 342
+ YSP+ P YSP+S S Y+P
Sbjct: 1703 SPIYSPTSPSYSPTSPS-YSP 1722
Score = 115 bits (289), Expect = 2e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1601 YSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1661 SPSYSPTSPSYSPTSPS-YSP 1680
Score = 115 bits (289), Expect = 2e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 115 bits (288), Expect = 2e-24
Identities = 57/84 (67%), Positives = 69/84 (82%), Gaps = 2/84 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSPSYSP+SP YSPTSP+YSP SP+YSPSSP S TSP YSP+SP++SP
Sbjct: 1733 KYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSP 1792
Query: 404 -STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSPSS S Y+P +
Sbjct: 1793 TSPKYSPTSPSYSPSSPS-YSPSS 1815
Score = 115 bits (287), Expect = 3e-24
Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1692 YSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPS 1751
Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336
+ YSP+ P YSP S S Y+P +
Sbjct: 1752 SPQYSPTSPAYSPQSPS-YSPSS 1773
Score = 114 bits (286), Expect = 4e-24
Identities = 57/83 (68%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPT 1744
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P YSP+S + Y+P++
Sbjct: 1745 SPSYSPSSPQYSPTSPA-YSPQS 1766
Score = 114 bits (286), Expect = 4e-24
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSPSYSPSSP+YSPSSP S TSP YSP+SP +SP
Sbjct: 1776 YSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPT 1835
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1836 SPAYSPTSPAYSPTSPA-YSP 1855
Score = 113 bits (282), Expect = 1e-23
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP YSPTSP+YSP SPSYSPSSP+YSP+SP S TSP YSP+SP++SP
Sbjct: 1741 YSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPT 1800
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSPS P YSPSS + Y+P
Sbjct: 1801 SPSYSPSSPSYSPSSPN-YSP 1820
Score = 113 bits (282), Expect = 1e-23
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SPSSP YSPTSP+YSP SPSYSP+SPSYSP+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1748 YSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPS 1807
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
+ YSPS P YSP+S + Y+P
Sbjct: 1808 SPSYSPSSPNYSPTSPT-YSP 1827
Score = 112 bits (280), Expect = 2e-23
Identities = 57/80 (71%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SPSSP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S
Sbjct: 1588 SPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTS 1647
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1648 PSYSPTSPSYSPTSPS-YSP 1666
Score = 112 bits (280), Expect = 2e-23
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSPSSP +SP
Sbjct: 1720 YSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPT 1779
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1780 SPKYSPTSPKYSPTS-PKYSP 1799
Score = 111 bits (278), Expect = 4e-23
Identities = 55/82 (67%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSP SPSYSP+SPSYSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP
Sbjct: 1754 QYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSP 1813
Query: 404 ST-GYSPSQPGYSPSSTSQYTP 342
S+ YSP+ P YSP+S + Y+P
Sbjct: 1814 SSPNYSPTSPTYSPTSPT-YSP 1834
Score = 110 bits (276), Expect = 6e-23
Identities = 54/82 (65%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSP+SPSYSP+SP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP
Sbjct: 1796 KYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSP 1855
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1856 TSPVYSPTSPAYSPTS-PKYSP 1876
Score = 110 bits (276), Expect = 6e-23
Identities = 59/108 (54%), Positives = 71/108 (65%), Gaps = 29/108 (26%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP++SP
Sbjct: 1818 YSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPT 1877
Query: 404 ---------------------STGYSPSQPGYSPSS------TSQYTP 342
STGYSP+ P YSPSS T QY+P
Sbjct: 1878 SPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSP 1925
Score = 107 bits (266), Expect = 9e-22
Identities = 54/97 (55%), Positives = 63/97 (64%), Gaps = 17/97 (17%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP+YSPTS YSPTSP YSPSSP YSP++P S TSP YSP+SP +SP
Sbjct: 1880 KYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSP 1939
Query: 404 ST----------------GYSPSQPGYSPSSTSQYTP 342
ST YSP P YSP T Y+P
Sbjct: 1940 STPTDKSVGSINYSPLEPDYSPGTPTYSPDGTPTYSP 1976
Score = 106 bits (265), Expect = 1e-21
Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F+P SP SP+SP YSPTSP YSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1580 FNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPT 1639
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1640 SPSYSPTSPSYSPTSPS-YSP 1659
Score = 103 bits (258), Expect = 7e-21
Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPT 1709
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S YSP+ P YSP+S +Y+P
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTS-PKYSP 1736
Score = 103 bits (258), Expect = 7e-21
Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSPTSP YSPTSPSYSP+SP+YSPSSP S TSP YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQ 1765
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ YSP+ P YSP+S +Y+P
Sbjct: 1766 SPSYSPSSPSYSPTSPKYSPTS-PKYSP 1792
Score = 103 bits (257), Expect = 1e-20
Identities = 56/99 (56%), Positives = 69/99 (69%), Gaps = 9/99 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP+YSP+S YSP+SP S +SP YSP++PQ+SP
Sbjct: 1867 YSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPT 1926
Query: 404 STGYSPSQPGYSPSSTS-------QYTPKTNDNKDDPGT 309
S YSP+ P YSPS+ + Y+P D PGT
Sbjct: 1927 SPKYSPASPTYSPSTPTDKSVGSINYSPLEPDY--SPGT 1963
Score = 101 bits (251), Expect = 5e-20
Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP ++P SP+ SP+SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1573 YSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPT 1632
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPSYSPTSPS-YSP 1652
Score = 96.3 bits (238), Expect = 2e-18
Identities = 49/86 (56%), Positives = 62/86 (72%), Gaps = 7/86 (8%)
Frame = -2
Query: 578 FSPSSPYSP------TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
FSP+ +SP + PSYSP SP+++P SP+ SPSSP YSP+SP S TSP YSP+SP
Sbjct: 1554 FSPAGGFSPAWSPQDSIPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSP 1613
Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S GYSP+ P YSP+S S Y+P
Sbjct: 1614 SYSPTSPGYSPTSPSYSPTSPS-YSP 1638
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/99 (47%), Positives = 57/99 (57%), Gaps = 24/99 (24%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP----------------YNS 450
+SP+SP YSP+SP YSPT+P YSPTSP YSP+SPTYSPS+P Y+
Sbjct: 1902 YSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSP 1961
Query: 449 GT-------SPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 354
GT +P YSP FS + + S YSPSS S
Sbjct: 1962 GTPTYSPDGTPTYSPDGRGFSGTAAKNISPMDYSPSSPS 2000
Score = 54.7 bits (130), Expect = 5e-06
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPS----YSPT---SPSYSP--SSPTYSPSSPYNSGTSPDYSPSSPQ 414
S +P + S+SP++ S +SP SP++SP S P+YSP+SP + SP SPSSP
Sbjct: 1534 SGMTPGAASFSPSAHSDASGFSPAGGFSPAWSPQDSIPSYSPNSPAFNPQSPAMSPSSP- 1592
Query: 413 FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
GYSP+ P YSP+S + + PG
Sbjct: 1593 -----GYSPTSPLYSPTSPGYSPTSPSYSPTSPG 1621
[17][TOP]
>UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270BB
Length = 2041
Score = 120 bits (301), Expect = 8e-26
Identities = 61/81 (75%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSPSSPQ+SP
Sbjct: 1726 YSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPT 1785
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP P YSPSS S Y+P
Sbjct: 1786 SPAYSPQSPSYSPSSPS-YSP 1805
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1642 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSP 1721
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1709 SPSYSPTSPSYSPTSPS-YSP 1728
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPT 1750
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1751 SPSYSPTSPKYSPTSPS-YSP 1770
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729
Query: 401 TG-YSPSQPGYSPSSTSQYTP 342
+ YSP+ P YSP+S S Y+P
Sbjct: 1730 SPIYSPTSPSYSPTSPS-YSP 1749
Score = 115 bits (289), Expect = 2e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1628 YSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707
Score = 115 bits (289), Expect = 2e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1635 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714
Score = 115 bits (288), Expect = 2e-24
Identities = 57/84 (67%), Positives = 69/84 (82%), Gaps = 2/84 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSPSYSP+SP YSPTSP+YSP SP+YSPSSP S TSP YSP+SP++SP
Sbjct: 1760 KYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSP 1819
Query: 404 -STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSPSS S Y+P +
Sbjct: 1820 TSPKYSPTSPSYSPSSPS-YSPSS 1842
Score = 115 bits (287), Expect = 3e-24
Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1719 YSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPS 1778
Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336
+ YSP+ P YSP S S Y+P +
Sbjct: 1779 SPQYSPTSPAYSPQSPS-YSPSS 1800
Score = 114 bits (286), Expect = 4e-24
Identities = 57/83 (68%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPT 1771
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P YSP+S + Y+P++
Sbjct: 1772 SPSYSPSSPQYSPTSPA-YSPQS 1793
Score = 114 bits (286), Expect = 4e-24
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSPSYSPSSP+YSPSSP S TSP YSP+SP +SP
Sbjct: 1803 YSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPT 1862
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1863 SPAYSPTSPAYSPTSPA-YSP 1882
Score = 113 bits (282), Expect = 1e-23
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP YSPTSP+YSP SPSYSPSSP+YSP+SP S TSP YSP+SP++SP
Sbjct: 1768 YSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPT 1827
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSPS P YSPSS + Y+P
Sbjct: 1828 SPSYSPSSPSYSPSSPN-YSP 1847
Score = 113 bits (282), Expect = 1e-23
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SPSSP YSPTSP+YSP SPSYSP+SPSYSP+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1775 YSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPS 1834
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
+ YSPS P YSP+S + Y+P
Sbjct: 1835 SPSYSPSSPNYSPTSPT-YSP 1854
Score = 112 bits (280), Expect = 2e-23
Identities = 57/80 (71%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SPSSP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S
Sbjct: 1615 SPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTS 1674
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1675 PSYSPTSPSYSPTSPS-YSP 1693
Score = 112 bits (280), Expect = 2e-23
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSPSSP +SP
Sbjct: 1747 YSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPT 1806
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1807 SPKYSPTSPKYSPTS-PKYSP 1826
Score = 111 bits (278), Expect = 4e-23
Identities = 55/82 (67%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSP SPSYSP+SPSYSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP
Sbjct: 1781 QYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSP 1840
Query: 404 ST-GYSPSQPGYSPSSTSQYTP 342
S+ YSP+ P YSP+S + Y+P
Sbjct: 1841 SSPNYSPTSPTYSPTSPT-YSP 1861
Score = 110 bits (276), Expect = 6e-23
Identities = 54/82 (65%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSP+SPSYSP+SP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP
Sbjct: 1823 KYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSP 1882
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1883 TSPVYSPTSPAYSPTS-PKYSP 1903
Score = 110 bits (276), Expect = 6e-23
Identities = 59/108 (54%), Positives = 71/108 (65%), Gaps = 29/108 (26%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP++SP
Sbjct: 1845 YSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPT 1904
Query: 404 ---------------------STGYSPSQPGYSPSS------TSQYTP 342
STGYSP+ P YSPSS T QY+P
Sbjct: 1905 SPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSP 1952
Score = 107 bits (266), Expect = 9e-22
Identities = 54/97 (55%), Positives = 63/97 (64%), Gaps = 17/97 (17%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP+YSPTS YSPTSP YSPSSP YSP++P S TSP YSP+SP +SP
Sbjct: 1907 KYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSP 1966
Query: 404 ST----------------GYSPSQPGYSPSSTSQYTP 342
ST YSP P YSP T Y+P
Sbjct: 1967 STPTDKSVGSINYSPLEPDYSPGTPTYSPDGTPTYSP 2003
Score = 106 bits (265), Expect = 1e-21
Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F+P SP SP+SP YSPTSP YSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1607 FNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPT 1666
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686
Score = 103 bits (258), Expect = 7e-21
Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPT 1736
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S YSP+ P YSP+S +Y+P
Sbjct: 1737 SPSYSPTSPSYSPTSPSYSPTS-PKYSP 1763
Score = 103 bits (258), Expect = 7e-21
Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSPTSP YSPTSPSYSP+SP+YSPSSP S TSP YSP
Sbjct: 1733 YSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQ 1792
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ YSP+ P YSP+S +Y+P
Sbjct: 1793 SPSYSPSSPSYSPTSPKYSPTS-PKYSP 1819
Score = 103 bits (257), Expect = 1e-20
Identities = 56/99 (56%), Positives = 69/99 (69%), Gaps = 9/99 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP+YSP+S YSP+SP S +SP YSP++PQ+SP
Sbjct: 1894 YSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPT 1953
Query: 404 STGYSPSQPGYSPSSTS-------QYTPKTNDNKDDPGT 309
S YSP+ P YSPS+ + Y+P D PGT
Sbjct: 1954 SPKYSPASPTYSPSTPTDKSVGSINYSPLEPDY--SPGT 1990
Score = 101 bits (251), Expect = 5e-20
Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP ++P SP+ SP+SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1600 YSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPT 1659
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1660 SPSYSPTSPSYSPTSPS-YSP 1679
Score = 97.4 bits (241), Expect = 7e-19
Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 7/83 (8%)
Frame = -2
Query: 569 SSPYSPT------SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
SSPY P+ SPSYSP SP+++P SP+ SPSSP YSP+SP S TSP YSP+SP +S
Sbjct: 1584 SSPYIPSPSRNVMSPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYS 1643
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S GYSP+ P YSP+S S Y+P
Sbjct: 1644 PTSPGYSPTSPSYSPTSPS-YSP 1665
Score = 95.5 bits (236), Expect = 3e-18
Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YSP SP+++P SP+ SP+SP YSP+SP YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1597 SPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSY 1656
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1657 SPTSPSYSPTSPS-YSP 1672
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/99 (47%), Positives = 57/99 (57%), Gaps = 24/99 (24%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP----------------YNS 450
+SP+SP YSP+SP YSPT+P YSPTSP YSP+SPTYSPS+P Y+
Sbjct: 1929 YSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSP 1988
Query: 449 GT-------SPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 354
GT +P YSP FS + + S YSPSS S
Sbjct: 1989 GTPTYSPDGTPTYSPDGRGFSGTAAKNISPMDYSPSSPS 2027
Score = 58.9 bits (141), Expect = 3e-07
Identities = 41/94 (43%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Frame = -2
Query: 578 FSPSSPYSPT-SP--SYSPTSPSYSP--TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
FSP+ +SP SP S S SP SP SPS + SP+YSP+SP + SP SPSSP
Sbjct: 1561 FSPAGGFSPAWSPQDSMSLGSPDSSPYIPSPSRNVMSPSYSPNSPAFNPQSPAMSPSSP- 1619
Query: 413 FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
GYSP+ P YSP+S + + PG
Sbjct: 1620 -----GYSPTSPLYSPTSPGYSPTSPSYSPTSPG 1648
[18][TOP]
>UniRef100_UPI000051AA8E PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Apis mellifera
RepID=UPI000051AA8E
Length = 452
Score = 120 bits (301), Expect = 8e-26
Identities = 61/81 (75%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P+SP S TSP YSPSSPQ+SP
Sbjct: 251 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPA 310
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSPS P YSP+S S Y+P
Sbjct: 311 SPSYSPSSPKYSPTSPS-YSP 330
Score = 119 bits (297), Expect = 2e-25
Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 209 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 268
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPSS + YTP
Sbjct: 269 SPSYSPTSPSYSPSSPN-YTP 288
Score = 117 bits (294), Expect = 5e-25
Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 202 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 261
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP+S S Y+P +
Sbjct: 262 SPSYSPTSPSYSPTSPS-YSPSS 283
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 160 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 219
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 220 SPSYSPTSPSYSPTSPS-YSP 239
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 167 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 226
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 227 SPSYSPTSPSYSPTSPS-YSP 246
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 188 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 247
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 248 SPSYSPTSPSYSPTSPS-YSP 267
Score = 117 bits (293), Expect = 6e-25
Identities = 57/83 (68%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 223 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 282
Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336
+ Y+P+ P YSP+S S Y+P +
Sbjct: 283 SPNYTPASPSYSPTSPS-YSPSS 304
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 153 YSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 212
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 213 SPSYSPTSPSYSPTSPS-YSP 232
Score = 114 bits (284), Expect = 7e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+PSSP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 147 TPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 206
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 207 PSYSPTSPSYSPTSPS-YSP 225
Score = 110 bits (276), Expect = 6e-23
Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 9/90 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--S 408
+SPSSP YSPTSPSYSPTSPS++ TSP Y+P+SPTYSP+SP S TSP YSPSSPQ S
Sbjct: 314 YSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPTYSPTSPTYSPTSPSYSPSSPQHTAS 373
Query: 407 PSTGYSPSQPGYSPSS------TSQYTPKT 336
ST YSPS P YSP+S + QY+P +
Sbjct: 374 GSTRYSPSSPNYSPTSPTYSPTSPQYSPSS 403
Score = 104 bits (260), Expect = 4e-21
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 9/90 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTSPSYSPTSPSYSPTSPSYS P+SP+YSP+SP S +SP+Y+P+
Sbjct: 230 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPA 289
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
SP +SP S YSPS P YSP+S S Y+P +
Sbjct: 290 SPSYSPTSPSYSPSSPQYSPASPS-YSPSS 318
Score = 104 bits (259), Expect = 6e-21
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 10/88 (11%)
Frame = -2
Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
+SPSSP YSP+SP+YSPTSP+YSPTSP YSPSS YSP+SP + TSP YSP
Sbjct: 363 YSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPTYTPTSPSYSP 422
Query: 425 SSPQFSPST-GYSPSQPGYSPSSTSQYT 345
+SP +SP GYSP+ P YSP+S + T
Sbjct: 423 TSPTYSPPVPGYSPTSPTYSPASPAYET 450
Score = 103 bits (258), Expect = 7e-21
Identities = 50/77 (64%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YSPTSP+Y PTSPS +P+SP+YSP+SPTYSP+SP S TSP YSP+SP +SP S Y
Sbjct: 129 SPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 188
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 189 SPTSPSYSPTSPS-YSP 204
Score = 103 bits (257), Expect = 1e-20
Identities = 52/88 (59%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP+Y+P SPSYSPTSPSYSPSSP YSP+SP S +SP YSP+SP +SP
Sbjct: 272 YSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPT 331
Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 332 SPSFAGTSPQYTPASPTYSPTSPT-YSP 358
Score = 101 bits (252), Expect = 4e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
P SP SPSYSPTSP+Y PTSPS +PSSP YSP+SP S TSP+YSP+SP +SP S
Sbjct: 121 PMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPS 180
Query: 395 YSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 181 YSPTSPSYSPTSPS-YSP 197
Score = 101 bits (251), Expect = 5e-20
Identities = 53/90 (58%), Positives = 67/90 (74%), Gaps = 10/90 (11%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPS--------YSPSSPTYSPSSPYNSGTSPDYS 429
+++P+SP YSPTSP+YSPTSPSYSP+SP YSPSSP YSP+SP S TSP YS
Sbjct: 341 QYTPASPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYS 400
Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
PSS ++SP S Y+P+ P YSP+S + Y+P
Sbjct: 401 PSSTKYSPTSPTYTPTSPSYSPTSPT-YSP 429
Score = 98.6 bits (244), Expect = 3e-19
Identities = 53/97 (54%), Positives = 70/97 (72%), Gaps = 16/97 (16%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTSPSYSP+SP YSP SPSYS P+SP+YSP+SP +GTSP Y+P+
Sbjct: 286 YTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPA 345
Query: 422 SPQFSP-STGYSPSQPGYSPSS-------TSQYTPKT 336
SP +SP S YSP+ P YSPSS +++Y+P +
Sbjct: 346 SPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSS 382
Score = 58.2 bits (139), Expect = 5e-07
Identities = 42/86 (48%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSY-SPTSPSYSPSSPTYSPS---SPYNSGTSPDYSPSSP 417
FSPS S S SP+YS SP SP SP S S SP+ SP S TSP Y P+SP
Sbjct: 85 FSPSGASDASGLSPAYSAYSPQPGSPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSP 144
Query: 416 QFSPST-GYSPSQPGYSPSSTSQYTP 342
+PS+ YSP+ P YSP+S + Y+P
Sbjct: 145 SITPSSPNYSPTSPTYSPTSPN-YSP 169
[19][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CBQ3_YARLI
Length = 1750
Score = 120 bits (301), Expect = 8e-26
Identities = 61/94 (64%), Positives = 74/94 (78%), Gaps = 8/94 (8%)
Frame = -2
Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSS 420
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSPSSP +N+G S YSP+S
Sbjct: 1654 YSPTSPSYSPTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKFNAGASTSYSPTS 1713
Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKD 321
P +SP S YSP+ P YSP+S S Y+P + D+KD
Sbjct: 1714 PSYSPTSPSYSPTSPSYSPTSPS-YSPGSGDSKD 1746
Score = 119 bits (297), Expect = 2e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1591 YSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S +P
Sbjct: 1651 SPSYSPTSPSYSPTSYSPTSP 1671
Score = 115 bits (288), Expect = 2e-24
Identities = 59/88 (67%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
FSPSSP YSP+SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+
Sbjct: 1577 FSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1663
Score = 110 bits (275), Expect = 8e-23
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 7/80 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YN----SGTSPDYSPSSP 417
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP Y+ S TSP YSP+SP
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSYSPTSPSYSPTSP 1678
Query: 416 QFSP-STGYSPSQPGYSPSS 360
+SP S YSP+ P YSPSS
Sbjct: 1679 SYSPTSPSYSPTSPSYSPSS 1698
Score = 103 bits (257), Expect = 1e-20
Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP----------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SPSSP +SP+SP+++ TSPSYSP+SPSYSP+SP+YSP+SP S TSP YS
Sbjct: 1561 YSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYS 1620
Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 100 bits (249), Expect = 8e-20
Identities = 58/95 (61%), Positives = 69/95 (72%), Gaps = 14/95 (14%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSP----- 438
+SP+SP YSPTSPSYSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1664
Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
YSP+SP +SP S YSP+ P YSP+S S Y+P +
Sbjct: 1665 SYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPSS 1698
Score = 90.1 bits (222), Expect = 1e-16
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSP---------SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
F +SP ++ TSPSYSP+SP S+SP+SP+++ +SP+YSPSSP S TSP YS
Sbjct: 1547 FGAASPGFAATSPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYS 1606
Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1607 PTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635
Score = 89.7 bits (221), Expect = 1e-16
Identities = 51/106 (48%), Positives = 64/106 (60%), Gaps = 27/106 (25%)
Frame = -2
Query: 578 FSPSSPYSP---TSPSYSPTSPSYSP-----------------------TSPSYSPSSPT 477
++P+SP+S SP ++ TSPSYSP TSPSYSPSSP+
Sbjct: 1538 YTPTSPFSSFGAASPGFAATSPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPS 1597
Query: 476 YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1642
[20][TOP]
>UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7S8F9_NEMVE
Length = 1929
Score = 120 bits (300), Expect = 1e-25
Identities = 58/83 (69%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1765
Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336
+ YSPS P YSP S S +P +
Sbjct: 1766 SPSYSPSSPSYSPQSPSYASPSS 1788
Score = 117 bits (294), Expect = 5e-25
Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP+S S Y+P +
Sbjct: 1745 SPSYSPTSPSYSPTSPS-YSPSS 1766
Score = 117 bits (294), Expect = 5e-25
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP +SPS
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPS 1772
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
+ YSP P Y+ S+ +Y+P
Sbjct: 1773 SPSYSPQSPSYASPSSPKYSP 1793
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1703 SPSYSPTSPSYSPTSPS-YSP 1722
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743
Score = 116 bits (291), Expect = 1e-24
Identities = 57/79 (72%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
SPSS YSP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1624 SPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701
Score = 115 bits (288), Expect = 2e-24
Identities = 58/80 (72%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SPSSP YSP SPSYSPTSP YSPTSP+YSP+SP+YSPSSP S TSP Y+P+SP +SP S
Sbjct: 1785 SPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPAS 1844
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSPS P YSPSS +YTP
Sbjct: 1845 PSYSPSSPSYSPSS-PRYTP 1863
Score = 112 bits (279), Expect = 3e-23
Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSPSSP +SP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQ 1779
Query: 404 --------STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1780 SPSYASPSSPKYSPASPSYSPTS-PKYSP 1807
Score = 111 bits (277), Expect = 5e-23
Identities = 60/96 (62%), Positives = 69/96 (71%), Gaps = 17/96 (17%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP--------YNSGTSPDYSP 426
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP+YSPSSP Y S +SP YSP
Sbjct: 1734 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSSPKYSP 1793
Query: 425 SSPQFSP--------STGYSPSQPGYSPSSTSQYTP 342
+SP +SP S YSP+ P YSPSS +Y+P
Sbjct: 1794 ASPSYSPTSPKYSPTSPNYSPASPSYSPSS-PKYSP 1828
Score = 110 bits (275), Expect = 8e-23
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP YSPTSPSY+P SPSYSP+SP+YSPSSP S +SP Y+P+SPQ+SP
Sbjct: 1812 YSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPT 1871
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T YTP
Sbjct: 1872 SPKYSPASPNYSP-TTPSYTP 1891
Score = 110 bits (275), Expect = 8e-23
Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSPSY+P SPSYSP SPSYSPSSP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1819 YSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPA 1878
Query: 404 STGYSPSQPGYSPSS 360
S YSP+ P Y+P S
Sbjct: 1879 SPNYSPTTPSYTPMS 1893
Score = 109 bits (273), Expect = 1e-22
Identities = 53/84 (63%), Positives = 69/84 (82%), Gaps = 2/84 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSP SPSYSP+SP YSPTSPSY+P+SP+YSP+SP S +SP YSPSSP+++P
Sbjct: 1804 KYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTP 1863
Query: 404 -STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP+S + Y+P T
Sbjct: 1864 TSPQYSPTSPKYSPASPN-YSPTT 1886
Score = 109 bits (272), Expect = 2e-22
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 9/90 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1751
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
SP +SP S YSPS P YSPSS S Y+P++
Sbjct: 1752 SPSYSPTSPSYSPSSPSYSPSSPS-YSPQS 1780
Score = 108 bits (271), Expect = 2e-22
Identities = 56/83 (67%), Positives = 67/83 (80%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPS--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP YSP+SPS YSP SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +S
Sbjct: 1613 YSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1672
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S S Y+P
Sbjct: 1673 PTSPSYSPTSPSYSPTSPS-YSP 1694
Score = 106 bits (264), Expect = 1e-21
Identities = 55/82 (67%), Positives = 65/82 (79%), Gaps = 4/82 (4%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPS--YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
SP+SP YSPTSP YSP+SPS YSP SPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1607 SPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1667 TSPSYSPTSPSYSPTSPS-YSP 1687
Score = 106 bits (264), Expect = 1e-21
Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP+YSP SPSYSP+SP YSP+SP+Y+P+SP S SP YSPSSP +SPS
Sbjct: 1798 YSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPS 1857
Query: 401 TG-YSPSQPGYSPSSTSQYTP 342
+ Y+P+ P YSP+S +Y+P
Sbjct: 1858 SPRYTPTSPQYSPTS-PKYSP 1877
Score = 104 bits (260), Expect = 4e-21
Identities = 55/83 (66%), Positives = 64/83 (77%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
F PSSP SP SPSYSPTSP YSP+SPS YSP+SP+YSP+SP S TSP YSP+SP +S
Sbjct: 1599 FMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYS 1658
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S S Y+P
Sbjct: 1659 PTSPSYSPTSPSYSPTSPS-YSP 1680
Score = 103 bits (256), Expect = 1e-20
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPSSPQFS 408
+SPSSP + P+SPS SP SPSYSPTSP YSPSSP+ YSP+SP S TSP YSP+SP +S
Sbjct: 1592 YSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYS 1651
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S S Y+P
Sbjct: 1652 PTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 102 bits (255), Expect = 2e-20
Identities = 54/84 (64%), Positives = 64/84 (76%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP---Q 414
++SP+SP YSPTSP YSPTSP+YSP SPSYSPSSP YSP+SP + SP YSP+SP
Sbjct: 1790 KYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSP 1849
Query: 413 FSPSTGYSPSQPGYSPSSTSQYTP 342
SPS YSPS P Y+P+S QY+P
Sbjct: 1850 SSPS--YSPSSPRYTPTS-PQYSP 1870
Score = 95.1 bits (235), Expect = 3e-18
Identities = 56/98 (57%), Positives = 69/98 (70%), Gaps = 17/98 (17%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY-SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+SPSSP YSP+SPSYSP SPSY SP+SP YSP+SP+YSP+SP S TSP+YSP+SP +SP
Sbjct: 1762 YSPSSPSYSPSSPSYSPQSPSYASPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSP 1821
Query: 404 STG-YSPSQP--------------GYSPSSTSQYTPKT 336
S+ YSP+ P YSPSS S Y+P +
Sbjct: 1822 SSPKYSPTSPSYTPASPSYSPASPSYSPSSPS-YSPSS 1858
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 3/79 (3%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN--SGTSPDYSPSSPQFSP-ST 399
S YSP+SP++ P+SPS SP SPSYSP+SP YSPSSP + S SP YSP+SP +SP S
Sbjct: 1589 SPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSP 1648
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1649 SYSPTSPSYSPTSPS-YSP 1666
Score = 89.0 bits (219), Expect = 2e-16
Identities = 38/63 (60%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
++P+SP YSP SPSYSP+SPSYSP+SP Y+P+SP YSP+SP S SP+YSP++P ++P
Sbjct: 1833 YTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTTPSYTPM 1892
Query: 401 TGY 393
+G+
Sbjct: 1893 SGH 1895
Score = 84.0 bits (206), Expect = 8e-15
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = -2
Query: 563 PYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPS 384
P SP PS + SP YSP+SP++ PSSP+ SP+SP S TSP YSPS SPS+GYSP+
Sbjct: 1577 PTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPS----SPSSGYSPA 1632
Query: 383 QPGYSPSSTSQYTP 342
P YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPS-YSP 1645
Score = 81.3 bits (199), Expect = 5e-14
Identities = 37/59 (62%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+SP+SP YSP+SPSYSP+SP Y+PTSP YSP+SP YSP+SP S T+P Y+P S P
Sbjct: 1840 YSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTTPSYTPMSGHIVP 1898
Score = 74.3 bits (181), Expect = 6e-12
Identities = 47/84 (55%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Frame = -2
Query: 578 FSPS----SPYSPTSPS-YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
FSPS +P SP SP SP PS + SP YSPSSP + PSSP S SP YSP+SP
Sbjct: 1560 FSPSWMSPTPGSPVSPGPTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPG 1619
Query: 413 FSPSTGYSPSQPGYSPSSTSQYTP 342
+SPS SPS GYSP+S S Y+P
Sbjct: 1620 YSPS---SPSS-GYSPASPS-YSP 1638
Score = 60.8 bits (146), Expect = 7e-08
Identities = 41/91 (45%), Positives = 51/91 (56%), Gaps = 12/91 (13%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY---NSGTSPDYSPSSPQFS 408
FSPS+ + S SPS+ +P SP SP P+SPY + SP YSPSSP F
Sbjct: 1544 FSPSAASDASGMSPGGFSPSWMSPTPG-SPVSP--GPTSPYIPSPAAASPGYSPSSPAFM 1600
Query: 407 PST--------GYSPSQPGYSPSS-TSQYTP 342
PS+ YSP+ PGYSPSS +S Y+P
Sbjct: 1601 PSSPSMSPASPSYSPTSPGYSPSSPSSGYSP 1631
[21][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
RepID=UPI0000F24379
Length = 1739
Score = 119 bits (299), Expect = 1e-25
Identities = 61/98 (62%), Positives = 75/98 (76%), Gaps = 11/98 (11%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP+
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1700
Query: 401 TG-YSPSQPGYSPSST---------SQYTPKTNDNKDD 318
+ YSP+ P YSP+S S +PKT D K++
Sbjct: 1701 SPLYSPTSPQYSPTSPQYSPGSPEYSPNSPKTEDKKNE 1738
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1673 SPSYSPTSPSYSPTS-PQYSP 1692
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1571 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1652 SPSYSPTSPSYSPTSPS-YSP 1671
Score = 117 bits (293), Expect = 6e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1693
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1694 SPQYSPTSPLYSPTS-PQYSP 1713
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1564 YSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1623
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1624 SPSYSPTSPSYSPTSPS-YSP 1643
Score = 112 bits (280), Expect = 2e-23
Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1547 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1606
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1607 SPTSPSYSPTSPS-YSP 1622
Score = 108 bits (269), Expect = 4e-22
Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
S S Y TSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1538 SVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1597
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1598 SYSPTSPSYSPTSPS-YSP 1615
Score = 89.0 bits (219), Expect = 2e-16
Identities = 53/94 (56%), Positives = 62/94 (65%), Gaps = 17/94 (18%)
Frame = -2
Query: 572 PSSPYSPTSP-SYSP---------------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
P+SP S TSP SY TSPSYSPTSPSYSP+SP+YSP+SP S TS
Sbjct: 1517 PTSP-SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1575
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1576 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1608
Score = 88.6 bits (218), Expect = 3e-16
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Frame = -2
Query: 575 SPSSPYS--PTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
S +SP+S TSPS+ + SP Y TSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1521 SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSP 1580
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1581 TSPSYSPTSPSYSPTSPS-YSP 1601
Score = 62.8 bits (151), Expect = 2e-08
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Frame = -2
Query: 551 TSPSYSPTSPSYSPTSP-SYSPSSPTYSPS-SPYNSGTSPDYSPSSPQFSP-STGYSPSQ 381
TS PTSPS TSP SY +SP++ S SP GTSP YSP+SP +SP S YSP+
Sbjct: 1511 TSYGGQPTSPS--ATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTS 1568
Query: 380 PGYSPSSTSQYTP 342
P YSP+S + Y+P
Sbjct: 1569 PSYSPTSPA-YSP 1580
[22][TOP]
>UniRef100_Q6ZJR1 DNA-directed RNA polymerase largest chain-like protein n=1
Tax=Oryza sativa Japonica Group RepID=Q6ZJR1_ORYSJ
Length = 138
Score = 119 bits (299), Expect = 1e-25
Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 7/90 (7%)
Frame = -2
Query: 578 FSPSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY--NSGTSPDYSPSSP 417
+SPSSP YS TSP+YSPTSP+YSPTSPSYS SP+YSP+SPY + G SPDYSP+SP
Sbjct: 42 YSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSP 101
Query: 416 QFSPSTGYSPSQPGYSPSST-SQYTPKTND 330
+SPS YSP+ PGYSPSST Q++P+ D
Sbjct: 102 NYSPSGSYSPTAPGYSPSSTGQQFSPQAAD 131
[23][TOP]
>UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FZ51_ORYSJ
Length = 1526
Score = 119 bits (299), Expect = 1e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1326 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1385
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ PGYSP+S S Y+P
Sbjct: 1386 SPAYSPTSPGYSPTSPS-YSP 1405
Score = 119 bits (299), Expect = 1e-25
Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 7/90 (7%)
Frame = -2
Query: 578 FSPSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY--NSGTSPDYSPSSP 417
+SPSSP YS TSP+YSPTSP+YSPTSPSYS SP+YSP+SPY + G SPDYSP+SP
Sbjct: 1430 YSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSP 1489
Query: 416 QFSPSTGYSPSQPGYSPSST-SQYTPKTND 330
+SPS YSP+ PGYSPSST Q++P+ D
Sbjct: 1490 NYSPSGSYSPTAPGYSPSSTGQQFSPQAAD 1519
Score = 116 bits (291), Expect = 1e-24
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1277 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPT 1336
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1337 SPSYSPTSPSYSPTSPS-YSP 1356
Score = 116 bits (291), Expect = 1e-24
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1347 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1406
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y+PSS ++Y+P
Sbjct: 1407 SPNYSPTSPSYNPSS-AKYSP 1426
Score = 114 bits (285), Expect = 5e-24
Identities = 55/80 (68%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+SP YSPTSPSYSP SPSYSPTSPSY+P SPTYSP+SP S TSP YSP+SP +SP S
Sbjct: 1229 YSPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTS 1288
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1289 PSYSPTSPSYSPTSPS-YSP 1307
Score = 114 bits (284), Expect = 7e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1312 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1371
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1372 SPSYSPTSPSYSPTSPA-YSP 1391
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1256 YTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1315
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1316 SPVYSPTSPAYSPTSPA-YSP 1335
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1298 YSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1357
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1358 SPSYSPTSPSYSPTSPS-YSP 1377
Score = 112 bits (281), Expect = 2e-23
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1305 YSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1364
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1365 SPSYSPTSPSYSPTSPS-YSP 1384
Score = 110 bits (276), Expect = 6e-23
Identities = 54/82 (65%), Positives = 65/82 (79%), Gaps = 3/82 (3%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+PSS ++SPS
Sbjct: 1368 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPS 1427
Query: 401 TGYSPSQPGYSPSS--TSQYTP 342
YSPS P SP S + Y+P
Sbjct: 1428 HAYSPSSPRLSPYSQTSPNYSP 1449
Score = 110 bits (274), Expect = 1e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP Y+P SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1249 YSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1308
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1309 SPSYSPTSPVYSPTSPA-YSP 1328
Score = 107 bits (268), Expect = 5e-22
Identities = 54/75 (72%), Positives = 64/75 (85%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP S TSP+YSP+SP ++PS
Sbjct: 1361 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPS 1420
Query: 401 TG-YSPSQPGYSPSS 360
+ YSPS YSPSS
Sbjct: 1421 SAKYSPSH-AYSPSS 1434
Score = 105 bits (263), Expect = 2e-21
Identities = 51/80 (63%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+SPSSP P YSPTSPSYSP SPSYSP+SP+Y+P SP S TSP YSP+SP +SP S
Sbjct: 1222 YSPSSPVYSPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTS 1281
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1282 PSYSPTSPSYSPTSPS-YSP 1300
Score = 87.4 bits (215), Expect = 7e-16
Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Frame = -2
Query: 572 PSSPYSPTSPS-YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
PS Y+P+S YSP+SP YSP P YSP+SP+YSP+SP S TSP Y+P SP +SP S
Sbjct: 1210 PSPGYTPSSGGGYSPSSPVYSP-GPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSP 1268
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1269 SYSPTSPSYSPTSPS-YSP 1286
Score = 55.1 bits (131), Expect = 4e-06
Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPT--SPSYSP-SSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
SPS SP + T +SP ++SP SP Y+PSS YSPSSP +SP
Sbjct: 1178 SPSYLLSPNIRASPITDAQFSPYVGGMAFSPVPSPGYTPSS------GGGYSPSSPVYSP 1231
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
GYSP+ P YSP+S S Y+P
Sbjct: 1232 GPGYSPTSPSYSPASPS-YSP 1251
[24][TOP]
>UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R4Y0_PICPG
Length = 1743
Score = 119 bits (299), Expect = 1e-25
Identities = 59/82 (71%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1552 RYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1611
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1612 TSPSYSPTSPSYSPTS-PQYSP 1632
Score = 118 bits (296), Expect = 3e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1588 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPT 1647
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1648 SPQYSPTSPQYSPTS-PQYSP 1667
Score = 118 bits (295), Expect = 4e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1574 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1633
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1634 SPQYSPTSPQYSPTS-PQYSP 1653
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1560 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1619
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1620 SPSYSPTSPQYSPTS-PQYSP 1639
Score = 115 bits (289), Expect = 2e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F+P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1546 FAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1605
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1606 SPSYSPTSPSYSPTSPS-YSP 1625
Score = 114 bits (286), Expect = 4e-24
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1609 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1668
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1669 SPQYSPTSPQYSPTS-PQYSP 1688
Score = 113 bits (283), Expect = 9e-24
Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1629 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1688
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1689 TSPQYSPTSPQYSPTS-PQYSP 1709
Score = 113 bits (283), Expect = 9e-24
Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1650 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1709
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1710 TSPQYSPTSPQYSPAS-PQYSP 1730
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F+P+SP ++PTSP YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1539 FAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1598
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1599 SPSYSPTSPSYSPTSPS-YSP 1618
Score = 110 bits (276), Expect = 6e-23
Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1657 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1716
Query: 404 -STGYSPSQPGYSPSSTS 354
S YSP+ P YSPS S
Sbjct: 1717 TSPQYSPASPQYSPSRHS 1734
Score = 102 bits (255), Expect = 2e-20
Identities = 50/80 (62%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
S +SP ++PTSP ++PTSP YSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1533 SATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1592
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1593 PSYSPTSPSYSPTSPS-YSP 1611
Score = 99.0 bits (245), Expect = 2e-19
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1671 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPASPQYSP 1730
Query: 404 STGYSPS 384
S +SP+
Sbjct: 1731 SR-HSPN 1736
Score = 97.4 bits (241), Expect = 7e-19
Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390
SPY PTSP S TSP ++PTSP ++P+SP YSP+SP S TSP YSP+SP +SP S YS
Sbjct: 1523 SPYQPTSPGLSATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYS 1582
Query: 389 PSQPGYSPSSTSQYTP 342
P+ P YSP+S S Y+P
Sbjct: 1583 PTSPSYSPTSPS-YSP 1597
Score = 70.9 bits (172), Expect = 7e-11
Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSPS +G S +
Sbjct: 1692 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPASPQYSPSRHSPNGESKE 1741
[25][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E6J4_LODEL
Length = 1745
Score = 119 bits (298), Expect = 2e-25
Identities = 60/88 (68%), Positives = 68/88 (77%), Gaps = 2/88 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1659 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPT 1718
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKD 321
S YSP P YSP S +Y PK+ KD
Sbjct: 1719 SPQYSPRSPNYSPKS-PEYKPKSPSKKD 1745
Score = 118 bits (296), Expect = 3e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1631 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1690
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1691 SPQYSPTSPSYSPTSPS-YSP 1710
Score = 118 bits (296), Expect = 3e-25
Identities = 58/83 (69%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1645 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPT 1704
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP+S QY+P++
Sbjct: 1705 SPSYSPTSPQYSPTS-PQYSPRS 1726
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1554 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1613
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1614 SPSYSPTSPSYSPTSPS-YSP 1633
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1575 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1634
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1635 SPSYSPTSPSYSPTSPS-YSP 1654
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1596 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1655
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1656 SPSYSPTSPSYSPTSPS-YSP 1675
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1617 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1676
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1677 SPSYSPTSPQYSPTS-PQYSP 1696
Score = 114 bits (286), Expect = 4e-24
Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1535 SPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1594
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1595 SYSPTSPSYSPTSPS-YSP 1612
Score = 77.8 bits (190), Expect = 6e-13
Identities = 43/79 (54%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = -2
Query: 569 SSPYS-PTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP+S T+P Y TSP Y TSP Y SP+SP+YSP+SP S TSP YSP+SP
Sbjct: 1513 TSPFSYGTTPGYGGTSPGYGGTSPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPS----- 1567
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1568 -YSPTSPSYSPTSPS-YSP 1584
[26][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2C
Length = 1888
Score = 119 bits (297), Expect = 2e-25
Identities = 59/83 (71%), Positives = 69/83 (83%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736
Query: 404 STGYSPSQPGYSPSS--TSQYTP 342
S YSP+ P YSPSS + +YTP
Sbjct: 1737 SPSYSPTSPNYSPSSPTSPKYTP 1759
Score = 117 bits (294), Expect = 5e-25
Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S S N + P
Sbjct: 1723 SPSYSPTSPSYSPTSPSYSPTSPNYSPSSP 1752
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1716 SPSYSPTSPSYSPTSPS-YSP 1735
Score = 117 bits (292), Expect = 8e-25
Identities = 58/84 (69%), Positives = 69/84 (82%), Gaps = 5/84 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1750
Query: 401 T----GYSPSQPGYSPSSTSQYTP 342
+ Y+P+ P YSPSS +YTP
Sbjct: 1751 SPTSPKYTPTSPSYSPSS-PEYTP 1773
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686
Score = 110 bits (276), Expect = 6e-23
Identities = 57/84 (67%), Positives = 69/84 (82%), Gaps = 5/84 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN---SGTSPDYSPSSPQF 411
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPSSP + + TSP YSPSSP++
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEY 1771
Query: 410 SP-STGYSPSQPGYSPSSTSQYTP 342
+P S YSP+ P YSP+S +Y+P
Sbjct: 1772 TPTSPKYSPTSPKYSPTS-PKYSP 1794
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1777 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1836
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1837 TSPKYSPTSPTYSPTSPKGSTYSP 1860
Score = 108 bits (270), Expect = 3e-22
Identities = 55/84 (65%), Positives = 70/84 (83%), Gaps = 5/84 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY---NSGTSPDYSPSSPQF 411
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP +S TSP Y+P+SP +
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSY 1764
Query: 410 SPST-GYSPSQPGYSPSSTSQYTP 342
SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1765 SPSSPEYTPTSPKYSPTS-PKYSP 1787
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1764 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1823
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1824 SPKYSPTSPTYSPTS-PKYSP 1843
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1791 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1850
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1851 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1883
Score = 105 bits (263), Expect = 2e-21
Identities = 54/84 (64%), Positives = 68/84 (80%), Gaps = 5/84 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
+SP+SP YSPTSPSYSPTSP+Y SPTSP Y+P+SP+YSPSSP + TSP YSP+SP++
Sbjct: 1726 YSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKY 1785
Query: 410 SP-STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ P YSP +T +Y+P
Sbjct: 1786 SPTSPKYSPTSPTYSP-TTPKYSP 1808
Score = 104 bits (259), Expect = 6e-21
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 5/84 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
+SP+SP YSPTSP+YSP TSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++
Sbjct: 1733 YSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKY 1792
Query: 410 SP-STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ P YSP+S + Y+P
Sbjct: 1793 SPTSPTYSPTTPKYSPTSPT-YSP 1815
Score = 104 bits (259), Expect = 6e-21
Identities = 51/84 (60%), Positives = 66/84 (78%), Gaps = 5/84 (5%)
Frame = -2
Query: 578 FSPSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
+SPSSP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++
Sbjct: 1747 YSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1806
Query: 410 SP-STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ P Y+P+S +Y+P
Sbjct: 1807 SPTSPTYSPTSPVYTPTS-PKYSP 1829
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1805 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1864
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1865 YSPTSPTYSLTSPAISPDDSDE 1886
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1545 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1597
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1598 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1623
[27][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3RM26_TRIAD
Length = 1784
Score = 119 bits (297), Expect = 2e-25
Identities = 59/82 (71%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP++SP
Sbjct: 1682 RYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSP 1741
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1742 TSPSYSPTSPRYSPTSPS-YSP 1762
Score = 116 bits (291), Expect = 1e-24
Identities = 58/82 (70%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1633 RYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSP 1692
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1693 TSPSYSPTSPSYSPTSPS-YSP 1713
Score = 115 bits (288), Expect = 2e-24
Identities = 57/82 (69%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1675 KYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSP 1734
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1735 TSPRYSPTSPSYSPTS-PRYSP 1755
Score = 115 bits (287), Expect = 3e-24
Identities = 57/82 (69%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R+SP+SP YSPTSPSYSPTSP YSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1654 RYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1713
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1714 TSPSYSPTSPRYSPTSPS-YSP 1734
Score = 115 bits (287), Expect = 3e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP++SP
Sbjct: 1669 YSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPT 1728
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1729 SPSYSPTSPRYSPTSPS-YSP 1748
Score = 114 bits (284), Expect = 7e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP++SP
Sbjct: 1599 YSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPT 1658
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1659 SPSYSPTSPSYSPTS-PKYSP 1678
Score = 114 bits (284), Expect = 7e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1613 YSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPT 1672
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1673 SPKYSPTSPRYSPTSPS-YSP 1692
Score = 113 bits (283), Expect = 9e-24
Identities = 56/82 (68%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1591 KYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSP 1650
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1651 TSPRYSPTSPSYSPTSPS-YSP 1671
Score = 112 bits (280), Expect = 2e-23
Identities = 56/81 (69%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1704 YSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPT 1763
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S Y+P
Sbjct: 1764 SPSYSPTSPSYSPTS-PDYSP 1783
Score = 108 bits (271), Expect = 2e-22
Identities = 54/76 (71%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390
S YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YS
Sbjct: 1590 SKYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYS 1649
Query: 389 PSQPGYSPSSTSQYTP 342
P+ P YSP+S S Y+P
Sbjct: 1650 PTSPRYSPTSPS-YSP 1664
Score = 102 bits (253), Expect = 3e-20
Identities = 50/73 (68%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1718 YSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSP----- 1772
Query: 401 TGYSPSQPGYSPS 363
YSP+ P YSP+
Sbjct: 1773 -SYSPTSPDYSPN 1784
Score = 65.5 bits (158), Expect = 3e-09
Identities = 46/98 (46%), Positives = 55/98 (56%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPY--SPTSPSYSPTSPS---------------YSPTSPSYS---PSSPTYSPSSPYN 453
PSSPY SPT ++ S YSPTSP P+SP YSP+SP
Sbjct: 1557 PSSPYMQSPTDITFYVAFQSIILTVESKLLTDFSKYSPTSP---SYSPTSPRYSPTSPSY 1613
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 SPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPS-YSP 1650
[28][TOP]
>UniRef100_C4Y5N3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y5N3_CLAL4
Length = 281
Score = 119 bits (297), Expect = 2e-25
Identities = 61/87 (70%), Positives = 68/87 (78%), Gaps = 2/87 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 195 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 254
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNK 324
S YSP P YSP S S Y K D K
Sbjct: 255 SPQYSPGSPSYSPRSPS-YGDKKEDEK 280
Score = 118 bits (296), Expect = 3e-25
Identities = 61/92 (66%), Positives = 73/92 (79%), Gaps = 5/92 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 188 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 247
Query: 404 STGYSPSQPGYSPSSTSQYTPKT---NDNKDD 318
S YSP+ P YSP S S Y+P++ D K+D
Sbjct: 248 SPQYSPTSPQYSPGSPS-YSPRSPSYGDKKED 278
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 97 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 156
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 157 SPSYSPTSPSYSPTSPS-YSP 176
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 118 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 177
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 178 SPSYSPTSPSYSPTSPS-YSP 197
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 139 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 198
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 199 SPSYSPTSPSYSPTSPS-YSP 218
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 160 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 219
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 220 SPSYSPTSPSYSPTSPS-YSP 239
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 181 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 240
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 241 SPSYSPTSPQYSPTS-PQYSP 260
Score = 112 bits (281), Expect = 2e-23
Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 80 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 139
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 140 SPTSPSYSPTSPS-YSP 155
Score = 106 bits (264), Expect = 1e-21
Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S Y TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 73 SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 132
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 133 SPTSPSYSPTSPS-YSP 148
Score = 100 bits (249), Expect = 8e-20
Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 11/89 (12%)
Frame = -2
Query: 575 SPSSPYS----------PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
SP+SP+S TSP Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP
Sbjct: 54 SPTSPFSYGGASPAFGGATSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 113
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 114 TSPSYSPTSPSYSPTSPSYSPTSPS-YSP 141
[29][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WN64_CANDC
Length = 1735
Score = 119 bits (297), Expect = 2e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1620 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1679
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1680 SPSYSPTSPQYSPTSPS-YSP 1699
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1693
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1694 SPSYSPTSPQYSPTS-PQYSP 1713
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1578 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPT 1637
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1638 SPSYSPTSPSYSPTSPS-YSP 1657
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1665
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1666 SPSYSPTSPQYSPTSPS-YSP 1685
Score = 116 bits (291), Expect = 1e-24
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1571 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPT 1630
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650
Score = 115 bits (288), Expect = 2e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1659 SPQYSPTSPSYSPTS-PQYSP 1678
Score = 115 bits (287), Expect = 3e-24
Identities = 56/89 (62%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1538 SPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1597
Query: 398 GYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
YSP+ P YSP+S S + + PG
Sbjct: 1598 SYSPTSPSYSPTSPSYSPTSPSYSPTSPG 1626
Score = 114 bits (286), Expect = 4e-24
Identities = 57/83 (68%), Positives = 66/83 (79%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1648 YSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1707
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP S Y PK+
Sbjct: 1708 SPQYSPTSPRYSPGSPG-YEPKS 1729
Score = 112 bits (280), Expect = 2e-23
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPT 1700
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1701 SPQYSPTSPQYSPTS-PRYSP 1720
Score = 99.0 bits (245), Expect = 2e-19
Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S Y+ YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1533 SPGYASPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1592
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1593 SPTSPSYSPTSPS-YSP 1608
Score = 90.9 bits (224), Expect = 7e-17
Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 6/82 (7%)
Frame = -2
Query: 569 SSPYS-----PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+SP+S TSP Y+ YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1521 TSPFSFGYNTATSPGYASPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1580
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1581 TSPSYSPTSPSYSPTSPS-YSP 1601
Score = 86.3 bits (212), Expect = 2e-15
Identities = 40/57 (70%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
++SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP YSP+SP S SP Y P SP+
Sbjct: 1675 QYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPRYSPGSPGYEPKSPK 1731
Score = 85.9 bits (211), Expect = 2e-15
Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 6/74 (8%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYS----PSSPTYSPSSPYNSGTSPDYSPSSP 417
++SP+SP YSPTSP YSPTSPSYSPTSP YS +YSP+SP S TSP YSP+SP
Sbjct: 1661 QYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSP----SYSPTSPQYSPTSPQYSPTSP 1716
Query: 416 QFSP-STGYSPSQP 378
++SP S GY P P
Sbjct: 1717 RYSPGSPGYEPKSP 1730
Score = 76.6 bits (187), Expect = 1e-12
Identities = 44/73 (60%), Positives = 49/73 (67%), Gaps = 5/73 (6%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS----PSSPTYSPSSPYNSGTSPDYSPSSPQ 414
+SP+SP YSPTSPSYSPTSP YSPTSPSYS YSP+SP S TSP YSP SP
Sbjct: 1669 YSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSP----QYSPTSPQYSPTSPRYSPGSPG 1724
Query: 413 FSPSTGYSPSQPG 375
+ P SP + G
Sbjct: 1725 YEPK---SPKKDG 1734
Score = 70.9 bits (172), Expect = 7e-11
Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG 447
++SP+SP YSPTSP YSPTSP YSPTSP YSP SP Y P SP G
Sbjct: 1689 QYSPTSPSYSPTSPQYSPTSPQYSPTSPRYSPGSPGYEPKSPKKDG 1734
[30][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48673
Length = 1880
Score = 118 bits (296), Expect = 3e-25
Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP++SP
Sbjct: 1668 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPT 1727
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP S S Y+P
Sbjct: 1728 SPSYSPTSPSYSPQSPS-YSP 1747
Score = 118 bits (295), Expect = 4e-25
Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1720
Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336
+ YSP+ P YSP+S S Y+P++
Sbjct: 1721 SPKYSPTSPSYSPTSPS-YSPQS 1742
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1584 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1643
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1644 SPSYSPTSPSYSPTSPS-YSP 1663
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1664
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1665 SPSYSPTSPSYSPTSPS-YSP 1684
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1685
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1686 SPSYSPTSPSYSPTSPS-YSP 1705
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1647 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1706
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPSS +Y+P
Sbjct: 1707 SPSYSPTSPSYSPSS-PKYSP 1726
Score = 117 bits (292), Expect = 8e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSPSYSPTSPSYSPTSP++SPSSPTYSP+SP S TSP YSPSSP++SP
Sbjct: 1752 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPT 1811
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1812 SPTYSPTSPKYSPASPT-YSP 1831
Score = 115 bits (289), Expect = 2e-24
Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSPSYSPTSPSYSP SPSYSP SP+YSPSSP S TSP YSP+SP +SP
Sbjct: 1717 YSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPT 1776
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S +SPS P YSP+S S Y+P
Sbjct: 1777 SPNFSPSSPTYSPASPS-YSP 1796
Score = 115 bits (287), Expect = 3e-24
Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPT 1734
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP P YSP S S Y+P +
Sbjct: 1735 SPSYSPQSPSYSPGSPS-YSPSS 1756
Score = 113 bits (282), Expect = 1e-23
Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
SPS YSPTSPSYSPTSP YSP SPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1565 SPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1624
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1625 SYSPTSPSYSPTSPS-YSP 1642
Score = 110 bits (276), Expect = 6e-23
Identities = 56/92 (60%), Positives = 69/92 (75%), Gaps = 5/92 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP S TSP YSPSSP +SP+
Sbjct: 1787 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1846
Query: 401 ----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ YSP+ P YSP+S S Y+P + DD
Sbjct: 1847 SPKGSTYSPTSPSYSPTSPS-YSPTSPGMGDD 1877
Score = 110 bits (275), Expect = 8e-23
Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP
Sbjct: 1703 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1762
Query: 404 STGYSPSQPGYSPSS 360
S YSP+ P YSP+S
Sbjct: 1763 SPSYSPTSPSYSPTS 1777
Score = 109 bits (273), Expect = 1e-22
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS
Sbjct: 1745 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPS 1804
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
+ YSP+ P YSP+S +Y+P
Sbjct: 1805 SPKYSPTSPTYSPTS-PKYSP 1824
Score = 108 bits (269), Expect = 4e-22
Identities = 55/83 (66%), Positives = 65/83 (78%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP +SP+SP+YSP SPSYSPTSP YSPSSP YSP+SP S TSP YSP+SP +SP
Sbjct: 1773 YSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPT 1832
Query: 404 STGYSPSQPGYSPSST--SQYTP 342
S YSPS P YSP+S S Y+P
Sbjct: 1833 SPKYSPSSPTYSPTSPKGSTYSP 1855
Score = 107 bits (267), Expect = 7e-22
Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP SP YSP SPSYSP+SP YSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP
Sbjct: 1738 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPT 1797
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSPS P YSP+S + Y+P
Sbjct: 1798 SPKYSPSSPKYSPTSPT-YSP 1817
Score = 100 bits (250), Expect = 6e-20
Identities = 55/97 (56%), Positives = 66/97 (68%), Gaps = 9/97 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSPTSPSYSP+SP YSP+SP+YSP+SP S SP YSP
Sbjct: 1689 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPG 1748
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP +SPS+ YSP+ P YSP+S S N + P
Sbjct: 1749 SPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSP 1785
Score = 91.7 bits (226), Expect = 4e-17
Identities = 49/82 (59%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Frame = -2
Query: 578 FSP--SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
FSP S +SP S SP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1548 FSPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSP 1607
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1608 TSPSYSPTSPSYSPTSPS-YSP 1628
Score = 62.8 bits (151), Expect = 2e-08
Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSP--SSPTYSPSSPYN--SGTSPDYSPSSPQFSP-S 402
S +P P +SP + + SP+YSP S SP SP S TSP YSP+SP +SP S
Sbjct: 1529 SGMTPGGPGFSPANSESTGFSPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPAS 1588
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607
Score = 60.8 bits (146), Expect = 7e-08
Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 4/38 (10%)
Frame = -2
Query: 581 RFSPSSP-YSPTSP---SYSPTSPSYSPTSPSYSPSSP 480
++SPSSP YSPTSP +YSPTSPSYSPTSPSYSP+SP
Sbjct: 1835 KYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTSP 1872
[31][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48672
Length = 1913
Score = 118 bits (296), Expect = 3e-25
Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP++SP
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPT 1760
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP S S Y+P
Sbjct: 1761 SPSYSPTSPSYSPQSPS-YSP 1780
Score = 118 bits (295), Expect = 4e-25
Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1694 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1753
Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336
+ YSP+ P YSP+S S Y+P++
Sbjct: 1754 SPKYSPTSPSYSPTSPS-YSPQS 1775
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1617 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1676
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1677 SPSYSPTSPSYSPTSPS-YSP 1696
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1697
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1698 SPSYSPTSPSYSPTSPS-YSP 1717
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1659 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1718
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1719 SPSYSPTSPSYSPTSPS-YSP 1738
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1680 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1739
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPSS +Y+P
Sbjct: 1740 SPSYSPTSPSYSPSS-PKYSP 1759
Score = 117 bits (292), Expect = 8e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSPSYSPTSPSYSPTSP++SPSSPTYSP+SP S TSP YSPSSP++SP
Sbjct: 1785 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPT 1844
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1845 SPTYSPTSPKYSPASPT-YSP 1864
Score = 115 bits (289), Expect = 2e-24
Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSPSYSPTSPSYSP SPSYSP SP+YSPSSP S TSP YSP+SP +SP
Sbjct: 1750 YSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPT 1809
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S +SPS P YSP+S S Y+P
Sbjct: 1810 SPNFSPSSPTYSPASPS-YSP 1829
Score = 115 bits (288), Expect = 2e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1610 YSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1669
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1670 SPSYSPTSPSYSPTSPS-YSP 1689
Score = 115 bits (287), Expect = 3e-24
Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP
Sbjct: 1708 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPT 1767
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP P YSP S S Y+P +
Sbjct: 1768 SPSYSPQSPSYSPGSPS-YSPSS 1789
Score = 110 bits (276), Expect = 6e-23
Identities = 56/92 (60%), Positives = 69/92 (75%), Gaps = 5/92 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP S TSP YSPSSP +SP+
Sbjct: 1820 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1879
Query: 401 ----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ YSP+ P YSP+S S Y+P + DD
Sbjct: 1880 SPKGSTYSPTSPSYSPTSPS-YSPTSPGMGDD 1910
Score = 110 bits (275), Expect = 8e-23
Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP
Sbjct: 1736 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1795
Query: 404 STGYSPSQPGYSPSS 360
S YSP+ P YSP+S
Sbjct: 1796 SPSYSPTSPSYSPTS 1810
Score = 109 bits (273), Expect = 1e-22
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+ P+SP +P SP YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1590 YLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1649
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1650 PSYSPTSPSYSPTSPS-YSP 1668
Score = 109 bits (273), Expect = 1e-22
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS
Sbjct: 1778 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPS 1837
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
+ YSP+ P YSP+S +Y+P
Sbjct: 1838 SPKYSPTSPTYSPTS-PKYSP 1857
Score = 108 bits (269), Expect = 4e-22
Identities = 55/83 (66%), Positives = 65/83 (78%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP +SP+SP+YSP SPSYSPTSP YSPSSP YSP+SP S TSP YSP+SP +SP
Sbjct: 1806 YSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPT 1865
Query: 404 STGYSPSQPGYSPSST--SQYTP 342
S YSPS P YSP+S S Y+P
Sbjct: 1866 SPKYSPSSPTYSPTSPKGSTYSP 1888
Score = 107 bits (267), Expect = 7e-22
Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP SP YSP SPSYSP+SP YSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP
Sbjct: 1771 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPT 1830
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSPS P YSP+S + Y+P
Sbjct: 1831 SPKYSPSSPKYSPTSPT-YSP 1850
Score = 100 bits (250), Expect = 6e-20
Identities = 55/97 (56%), Positives = 66/97 (68%), Gaps = 9/97 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSPTSPSYSP+SP YSP+SP+YSP+SP S SP YSP
Sbjct: 1722 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPG 1781
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP +SPS+ YSP+ P YSP+S S N + P
Sbjct: 1782 SPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSP 1818
Score = 99.4 bits (246), Expect = 2e-19
Identities = 53/85 (62%), Positives = 61/85 (71%), Gaps = 8/85 (9%)
Frame = -2
Query: 572 PSSP-YSPTSPSY------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
P SP YSP SPSY +P SP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1578 PMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS 1637
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPS-YSP 1661
Score = 77.8 bits (190), Expect = 6e-13
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPTSPSYS-PTSPSYSPSSPTY---SPSSPYNSG---TSPDYS 429
+SP+ P SP SP+ SP PS + P SPSYSP+SP+Y SP++P + G TSP YS
Sbjct: 1552 YSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYS 1611
Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1612 PTSPGYSPASPSYSPTSPSYSPTSPS-YSP 1640
Score = 73.6 bits (179), Expect = 1e-11
Identities = 48/90 (53%), Positives = 59/90 (65%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSPYSPT-SPS-YSPTSPSYS--------PTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
FSP+ YSP SP SP SP+ S P SPSYSP+SP+Y P+SP + SP YS
Sbjct: 1548 FSPA--YSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASP-ATPQSPGYS 1604
Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P+SP +SP S GYSP+ P YSP+S S Y+P
Sbjct: 1605 PTSPSYSPTSPGYSPASPSYSPTSPS-YSP 1633
Score = 60.8 bits (146), Expect = 7e-08
Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 4/38 (10%)
Frame = -2
Query: 581 RFSPSSP-YSPTSP---SYSPTSPSYSPTSPSYSPSSP 480
++SPSSP YSPTSP +YSPTSPSYSPTSPSYSP+SP
Sbjct: 1868 KYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTSP 1905
[32][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48671
Length = 1921
Score = 118 bits (296), Expect = 3e-25
Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP++SP
Sbjct: 1709 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPT 1768
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP S S Y+P
Sbjct: 1769 SPSYSPTSPSYSPQSPS-YSP 1788
Score = 118 bits (295), Expect = 4e-25
Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1702 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1761
Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336
+ YSP+ P YSP+S S Y+P++
Sbjct: 1762 SPKYSPTSPSYSPTSPS-YSPQS 1783
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1625 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1685 SPSYSPTSPSYSPTSPS-YSP 1704
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1706 SPSYSPTSPSYSPTSPS-YSP 1725
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1726
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1727 SPSYSPTSPSYSPTSPS-YSP 1746
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1747
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPSS +Y+P
Sbjct: 1748 SPSYSPTSPSYSPSS-PKYSP 1767
Score = 117 bits (292), Expect = 8e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSPSYSPTSPSYSPTSP++SPSSPTYSP+SP S TSP YSPSSP++SP
Sbjct: 1793 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPT 1852
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1853 SPTYSPTSPKYSPASPT-YSP 1872
Score = 115 bits (289), Expect = 2e-24
Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSPSYSPTSPSYSP SPSYSP SP+YSPSSP S TSP YSP+SP +SP
Sbjct: 1758 YSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPT 1817
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S +SPS P YSP+S S Y+P
Sbjct: 1818 SPNFSPSSPTYSPASPS-YSP 1837
Score = 115 bits (288), Expect = 2e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1618 YSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1677
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1678 SPSYSPTSPSYSPTSPS-YSP 1697
Score = 115 bits (287), Expect = 3e-24
Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP
Sbjct: 1716 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPT 1775
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP P YSP S S Y+P +
Sbjct: 1776 SPSYSPQSPSYSPGSPS-YSPSS 1797
Score = 110 bits (276), Expect = 6e-23
Identities = 56/92 (60%), Positives = 69/92 (75%), Gaps = 5/92 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP S TSP YSPSSP +SP+
Sbjct: 1828 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1887
Query: 401 ----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ YSP+ P YSP+S S Y+P + DD
Sbjct: 1888 SPKGSTYSPTSPSYSPTSPS-YSPTSPGMGDD 1918
Score = 110 bits (275), Expect = 8e-23
Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP
Sbjct: 1744 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1803
Query: 404 STGYSPSQPGYSPSS 360
S YSP+ P YSP+S
Sbjct: 1804 SPSYSPTSPSYSPTS 1818
Score = 109 bits (273), Expect = 1e-22
Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+ P+SP +P SP YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1598 YLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1657
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1658 PSYSPTSPSYSPTSPS-YSP 1676
Score = 109 bits (273), Expect = 1e-22
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS
Sbjct: 1786 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPS 1845
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
+ YSP+ P YSP+S +Y+P
Sbjct: 1846 SPKYSPTSPTYSPTS-PKYSP 1865
Score = 108 bits (269), Expect = 4e-22
Identities = 55/83 (66%), Positives = 65/83 (78%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP +SP+SP+YSP SPSYSPTSP YSPSSP YSP+SP S TSP YSP+SP +SP
Sbjct: 1814 YSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPT 1873
Query: 404 STGYSPSQPGYSPSST--SQYTP 342
S YSPS P YSP+S S Y+P
Sbjct: 1874 SPKYSPSSPTYSPTSPKGSTYSP 1896
Score = 107 bits (267), Expect = 7e-22
Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP SP YSP SPSYSP+SP YSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP
Sbjct: 1779 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPT 1838
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSPS P YSP+S + Y+P
Sbjct: 1839 SPKYSPSSPKYSPTSPT-YSP 1858
Score = 100 bits (250), Expect = 6e-20
Identities = 55/97 (56%), Positives = 66/97 (68%), Gaps = 9/97 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSPTSPSYSP+SP YSP+SP+YSP+SP S SP YSP
Sbjct: 1730 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPG 1789
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP +SPS+ YSP+ P YSP+S S N + P
Sbjct: 1790 SPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSP 1826
Score = 99.4 bits (246), Expect = 2e-19
Identities = 53/85 (62%), Positives = 61/85 (71%), Gaps = 8/85 (9%)
Frame = -2
Query: 572 PSSP-YSPTSPSY------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
P SP YSP SPSY +P SP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1586 PMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS 1645
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPS-YSP 1669
Score = 77.8 bits (190), Expect = 6e-13
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPTSPSYS-PTSPSYSPSSPTY---SPSSPYNSG---TSPDYS 429
+SP+ P SP SP+ SP PS + P SPSYSP+SP+Y SP++P + G TSP YS
Sbjct: 1560 YSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYS 1619
Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1620 PTSPGYSPASPSYSPTSPSYSPTSPS-YSP 1648
Score = 73.6 bits (179), Expect = 1e-11
Identities = 48/90 (53%), Positives = 59/90 (65%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSPYSPT-SPS-YSPTSPSYS--------PTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
FSP+ YSP SP SP SP+ S P SPSYSP+SP+Y P+SP + SP YS
Sbjct: 1556 FSPA--YSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASP-ATPQSPGYS 1612
Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P+SP +SP S GYSP+ P YSP+S S Y+P
Sbjct: 1613 PTSPSYSPTSPGYSPASPSYSPTSPS-YSP 1641
Score = 60.8 bits (146), Expect = 7e-08
Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 4/38 (10%)
Frame = -2
Query: 581 RFSPSSP-YSPTSP---SYSPTSPSYSPTSPSYSPSSP 480
++SPSSP YSPTSP +YSPTSPSYSPTSPSYSP+SP
Sbjct: 1876 KYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTSP 1913
[33][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5670C
Length = 2007
Score = 118 bits (296), Expect = 3e-25
Identities = 60/81 (74%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P+SP S TSP YSPSSPQ+SP
Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPA 1770
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S +SPS P YSP+S S Y+P
Sbjct: 1771 SPSFSPSSPKYSPTSPS-YSP 1790
Score = 117 bits (294), Expect = 5e-25
Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1721
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP+S S Y+P +
Sbjct: 1722 SPSYSPTSPSYSPTSPS-YSPSS 1743
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1613 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1673 SPSYSPTSPSYSPTSPS-YSP 1692
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1679
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1680 SPSYSPTSPSYSPTSPS-YSP 1699
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1701 SPSYSPTSPSYSPTSPS-YSP 1720
Score = 117 bits (292), Expect = 8e-25
Identities = 59/88 (67%), Positives = 69/88 (78%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1742
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ YSP+ P YSPSS QY+P
Sbjct: 1743 SPRYTPASPSYSPTSPSYSPSS-PQYSP 1769
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1606 YSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1665
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1666 SPSYSPTSPSYSPTSPS-YSP 1685
Score = 111 bits (278), Expect = 4e-23
Identities = 56/88 (63%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
F P+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+
Sbjct: 1592 FQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1652 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1678
Score = 108 bits (271), Expect = 2e-22
Identities = 49/83 (59%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP YSP SPS+SP+SP YSP+SP+YSP+SP +G SP YSP+SP +SP
Sbjct: 1753 YSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPT 1812
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P ++P+++S+Y+P +
Sbjct: 1813 SPNYSPSSPQHTPAASSRYSPSS 1835
Score = 108 bits (270), Expect = 3e-22
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 3/83 (3%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP +SP+SP YSPTSPSYSPTSPS++ SP YSP+SP S TSP+YSPSSPQ +P
Sbjct: 1766 QYSPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTP 1825
Query: 404 --STGYSPSQPGYSPSSTSQYTP 342
S+ YSPS P YSPSS S Y+P
Sbjct: 1826 AASSRYSPSSPNYSPSSPS-YSP 1847
Score = 105 bits (263), Expect = 2e-21
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP + PTSPS +P SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1585 YSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1644
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1645 SPSYSPTSPSYSPTSPS-YSP 1664
Score = 104 bits (260), Expect = 4e-21
Identities = 55/95 (57%), Positives = 65/95 (68%), Gaps = 16/95 (16%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SPSYSPTSPSYSPSSP YSP+SP S +SP YSP+SP +SP
Sbjct: 1732 YSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPT 1791
Query: 404 --------------STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPSS Q+TP
Sbjct: 1792 SPSFAGGSPQYSPTSPSYSPTSPNYSPSS-PQHTP 1825
Score = 102 bits (255), Expect = 2e-20
Identities = 60/96 (62%), Positives = 67/96 (69%), Gaps = 17/96 (17%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYN--------SG 447
FSPSSP YSPTSPSYSPTSPS YSPTSPSYSP+SP YSPSSP + S
Sbjct: 1774 FSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAASSRYSP 1833
Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP+YSPSSP +SP S YSP YSP+S + YTP
Sbjct: 1834 SSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPT-YTP 1868
Score = 99.4 bits (246), Expect = 2e-19
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YSP+SPS+ PTSPS +P SP YSP+SP YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1582 SPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 1641
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1642 SPTSPSYSPTSPS-YSP 1657
Score = 97.4 bits (241), Expect = 7e-19
Identities = 50/89 (56%), Positives = 59/89 (66%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
+SPSSP YSP+SP+YSP+SPSYSPTSP YSP S YSP+SP + TSP YSP
Sbjct: 1816 YSPSSPQHTPAASSRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSP 1875
Query: 425 SSPQFSPS-TGYSPSQPGYSPSSTSQYTP 342
+SP +S YSPS P YSP+S P
Sbjct: 1876 ASPAYSSQPPRYSPSSPSYSPTSPITLPP 1904
Score = 94.7 bits (234), Expect = 5e-18
Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SPSSP YSPTSP YSP S YSPTSP+Y+P+SP+YSP+SP S P YSPSSP +SP+
Sbjct: 1838 YSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPT 1897
Query: 401 TGYS-PSQPGYSPSSTSQYTPKTND 330
+ + P P YS SS S YT + D
Sbjct: 1898 SPITLPPSPYYSRSS-STYTFSSRD 1921
Score = 81.6 bits (200), Expect = 4e-14
Identities = 43/80 (53%), Positives = 55/80 (68%), Gaps = 8/80 (10%)
Frame = -2
Query: 557 SPTSPSYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+P SP+ SP SPSYSP+SPS+ P+SP+ +P SP S TSP YSP+SP +SP S
Sbjct: 1565 TPQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTS 1624
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1625 PSYSPTSPSYSPTSPS-YSP 1643
Score = 77.0 bits (188), Expect = 1e-12
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 17/108 (15%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGTSP---- 438
++SP+SP Y+PTSPSYSP SP+YS P+SPSYSP+SP P SPY S +S
Sbjct: 1858 KYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTSPITLPPSPYYSRSSSTYTF 1917
Query: 437 ---DYSPSSPQFSPSTGYSP--SQPGYSPSSTSQYTPKTNDNKDDPGT 309
DY+ SSP +SP+ + P YSP+ + N N+ + T
Sbjct: 1918 SSRDYTYSSPPYSPTIPQDEMFTSPVYSPTIPKYFRSDINRNRTESPT 1965
Score = 69.7 bits (169), Expect = 2e-10
Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSY-----SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
FSPS S S SP Y +P SP+ SP S SP+YSPSSP TSP +P S
Sbjct: 1544 FSPSAASDASGMSPGYGAWSPTPQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVS 1603
Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTP 342
P +SP S GYSP+ P YSP+S S Y+P
Sbjct: 1604 PGYSPTSPGYSPTSPNYSPTSPS-YSP 1629
Score = 63.9 bits (154), Expect = 9e-09
Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 16/91 (17%)
Frame = -2
Query: 566 SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
S +P P++SP+ SP Y SP+ P SP SP G SP YSPSSP F
Sbjct: 1535 SGMTPGGPAFSPSAASDASGMSPGYGAWSPT--PQSPAMSPFMASPHGQSPSYSPSSPSF 1592
Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342
P S GYSP+ PGYSP+S + Y+P
Sbjct: 1593 QPTSPSMTPVSPGYSPTSPGYSPTSPN-YSP 1622
[34][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD271
Length = 1749
Score = 118 bits (296), Expect = 3e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1687
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1688 SPQYSPTSPSYSPTSPS-YSP 1707
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1572 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1631
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1632 SPSYSPTSPSYSPTSPS-YSP 1651
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1593 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1674 SPSYSPTSPQYSPTS-PQYSP 1693
Score = 115 bits (289), Expect = 2e-24
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPT 1708
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1709 SPQYSPTSPQYSPTS-PQYSP 1728
Score = 112 bits (281), Expect = 2e-23
Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1555 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1614
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1615 SPTSPSYSPTSPS-YSP 1630
Score = 107 bits (267), Expect = 7e-22
Identities = 56/88 (63%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ
Sbjct: 1670 YSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQ---- 1725
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
YSP P YSP S S K+ D K D
Sbjct: 1726 --YSPGSPLYSPESES----KSKDEKKD 1747
Score = 106 bits (264), Expect = 1e-21
Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S Y TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1548 SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1607
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1608 SPTSPSYSPTSPS-YSP 1623
Score = 100 bits (248), Expect = 1e-19
Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 11/89 (12%)
Frame = -2
Query: 575 SPSSPYS----------PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
SP+SP+S TSP Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP
Sbjct: 1529 SPTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1588
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1589 TSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1616
[35][TOP]
>UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CL79_KLULA
Length = 1720
Score = 118 bits (296), Expect = 3e-25
Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1543 FSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1602
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1603 SPSYSPTSPSYSPTSPS-YSP 1622
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1609
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1610 SPSYSPTSPSYSPTSPS-YSP 1629
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1571 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1652 SPSYSPTSPSYSPTSPS-YSP 1671
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1673 SPSYSPTSPSYSPTSPS-YSP 1692
Score = 111 bits (277), Expect = 5e-23
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP----- 1688
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
YSP+ P YSP S S PK ++ ++
Sbjct: 1689 -SYSPTSPQYSPGSYSPAEPKQQESDEE 1715
Score = 110 bits (274), Expect = 1e-22
Identities = 55/78 (70%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
Frame = -2
Query: 569 SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
SSP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1539 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598
Query: 395 YSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1599 YSPTSPSYSPTSPS-YSP 1615
[36][TOP]
>UniRef100_O94231 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kluyveromyces
lactis RepID=O94231_KLULA
Length = 414
Score = 118 bits (296), Expect = 3e-25
Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 237 FSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 296
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 297 SPSYSPTSPSYSPTSPS-YSP 316
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 244 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 303
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 304 SPSYSPTSPSYSPTSPS-YSP 323
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 265 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 324
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 325 SPSYSPTSPSYSPTSPS-YSP 344
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 286 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 345
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 346 SPSYSPTSPSYSPTSPS-YSP 365
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 307 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 366
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 367 SPSYSPTSPSYSPTSPS-YSP 386
Score = 111 bits (277), Expect = 5e-23
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP
Sbjct: 328 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP----- 382
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
YSP+ P YSP S S PK ++ ++
Sbjct: 383 -SYSPTSPQYSPGSYSPAEPKQQESDEE 409
Score = 110 bits (274), Expect = 1e-22
Identities = 55/78 (70%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
Frame = -2
Query: 569 SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
SSP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 233 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 292
Query: 395 YSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 293 YSPTSPSYSPTSPS-YSP 309
[37][TOP]
>UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5E245_LACTC
Length = 1740
Score = 118 bits (296), Expect = 3e-25
Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1544 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1603
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1604 SPSYSPTSPSYSPTSPS-YSP 1623
Score = 118 bits (296), Expect = 3e-25
Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 2/89 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
S YSP P YSP S + N+N ++
Sbjct: 1709 SPSYSPGSPSYSPGSPKKENDNDNNNNNN 1737
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1565 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1624
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1625 SPSYSPTSPSYSPTSPS-YSP 1644
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1586 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1645
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1646 SPSYSPTSPSYSPTSPS-YSP 1665
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1607 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707
Score = 109 bits (273), Expect = 1e-22
Identities = 53/77 (68%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S +SPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1541 SPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1600
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1601 SPTSPSYSPTSPS-YSP 1616
Score = 66.2 bits (160), Expect = 2e-09
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPT-SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
SSP+S + PTSP + SP +SP+SP YSP TSP YSP+SP +SP S
Sbjct: 1521 SSPFSGYGDA--PTSPGFGGVASPGFSPTSPAYSP-------TSPSYSPTSPSYSPTSPS 1571
Query: 395 YSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1572 YSPTSPSYSPTSPS-YSP 1588
[38][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JYP8_SCHJY
Length = 1748
Score = 118 bits (296), Expect = 3e-25
Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1555 YSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1614
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1615 SPSYSPTSPSYSPTSPS-YSP 1634
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1576 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1635
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1636 SPSYSPTSPSYSPTSPS-YSP 1655
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1597 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1657 SPSYSPTSPSYSPTSPS-YSP 1676
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1618 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1677
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1678 SPSYSPTSPSYSPTSPS-YSP 1697
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSPSSP YSP+SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1548 FSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1607
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1608 SPSYSPTSPSYSPTSPS-YSP 1627
Score = 111 bits (277), Expect = 5e-23
Identities = 58/94 (61%), Positives = 68/94 (72%), Gaps = 15/94 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPG 1705
Query: 404 -------------STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1706 HSAQNAQGRMSPRSPVYSPTSPSYSPTSPS-YSP 1738
Score = 107 bits (267), Expect = 7e-22
Identities = 53/78 (67%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
Frame = -2
Query: 569 SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
SSP +SP+SPSYSP+SP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1544 SSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1603
Query: 395 YSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1604 YSPTSPSYSPTSPS-YSP 1620
Score = 106 bits (264), Expect = 1e-21
Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684
Query: 404 STGYSPSQP---GYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P SPS + ++ + + P
Sbjct: 1685 SPSYSPTSPSYSPTSPSYSPGHSAQNAQGRMSP 1717
Score = 95.1 bits (235), Expect = 3e-18
Identities = 51/86 (59%), Positives = 58/86 (67%), Gaps = 14/86 (16%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS-------------SPYNSGTS 441
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP SP S TS
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGHSAQNAQGRMSPRSPVYSPTS 1726
Query: 440 PDYSPSSPQFSPSTGYSPSQPGYSPS 363
P YSP+SP YSP+ P YSP+
Sbjct: 1727 PSYSPTSP------SYSPTSPRYSPN 1746
Score = 87.4 bits (215), Expect = 7e-16
Identities = 43/70 (61%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = -2
Query: 548 SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 372
SP +SP +SP+SPSYSPSSP YSP+SP S TSP YSP+SP +SP S YSP+ P Y
Sbjct: 1538 SPFSGASSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1597
Query: 371 SPSSTSQYTP 342
SP+S S Y+P
Sbjct: 1598 SPTSPS-YSP 1606
Score = 80.9 bits (198), Expect = 7e-14
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
+SPY + S SP +SP +SPSSP+YSPSSP S TSP YSP+SP +SP S Y
Sbjct: 1524 ASPYGADARSPGYMSPFSGASSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSY 1583
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1584 SPTSPSYSPTSPS-YSP 1599
[39][TOP]
>UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RSM9_DEBHA
Length = 1749
Score = 118 bits (296), Expect = 3e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1687
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1688 SPQYSPTSPSYSPTSPS-YSP 1707
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1572 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1631
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1632 SPSYSPTSPSYSPTSPS-YSP 1651
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1593 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1674 SPSYSPTSPQYSPTS-PQYSP 1693
Score = 115 bits (289), Expect = 2e-24
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPT 1708
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1709 SPQYSPTSPQYSPTS-PQYSP 1728
Score = 112 bits (281), Expect = 2e-23
Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1555 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1614
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1615 SPTSPSYSPTSPS-YSP 1630
Score = 108 bits (271), Expect = 2e-22
Identities = 56/88 (63%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ
Sbjct: 1670 YSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQ---- 1725
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
YSP P YSP S S K+ D K D
Sbjct: 1726 --YSPGSPSYSPESES----KSKDEKKD 1747
Score = 106 bits (264), Expect = 1e-21
Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S Y TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1548 SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1607
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1608 SPTSPSYSPTSPS-YSP 1623
Score = 100 bits (248), Expect = 1e-19
Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 11/89 (12%)
Frame = -2
Query: 575 SPSSPYS----------PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
SP+SP+S TSP Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP
Sbjct: 1529 SPTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1588
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1589 TSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1616
[40][TOP]
>UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
RepID=A1YIA7_ISSOR
Length = 1647
Score = 118 bits (296), Expect = 3e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1526 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPT 1585
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1586 SPQYSPTSPQYSPTS-PQYSP 1605
Score = 118 bits (295), Expect = 4e-25
Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1519 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1578
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1579 SPQYSPTSPQYSPTS-PQYSP 1598
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1512 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1571
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1572 SPQYSPTSPQYSPTS-PQYSP 1591
Score = 114 bits (286), Expect = 4e-24
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1547 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1606
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1607 SPQYSPTSPQYSPTS-PQYSP 1626
Score = 114 bits (284), Expect = 7e-24
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1505 YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1564
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1565 SPQYSPTSPQYSPTS-PQYSP 1584
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1484 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1543
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1544 SPSYSPTSPSYSPTSPS-YSP 1563
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1498 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1557
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1558 SPSYSPTSPQYSPTS-PQYSP 1577
Score = 113 bits (282), Expect = 1e-23
Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1567 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1626
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1627 TSPQYSPTSPQYSPTSPS-YSP 1647
Score = 112 bits (281), Expect = 2e-23
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1477 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPT 1536
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1537 SPSYSPTSPSYSPTSPS-YSP 1556
Score = 110 bits (276), Expect = 6e-23
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+ P+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1470 YGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1529
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1530 SPSYSPTSPSYSPTSPS-YSP 1549
Score = 110 bits (275), Expect = 8e-23
Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+ P+SP Y PTSPSYSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1463 YGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1522
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1523 SPAYSPTSPSYSPTSPS-YSP 1542
Score = 107 bits (266), Expect = 9e-22
Identities = 52/77 (67%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S Y PTSPSY PTSPSYSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1460 SPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1519
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1520 SPTSPAYSPTSPS-YSP 1535
Score = 105 bits (261), Expect = 3e-21
Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 3/82 (3%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+ P+SP Y TSPSY PTSPSY PTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1448 YQPTSPFGYGATSPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1507
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1508 TSPAYSPTSPAYSPTSPA-YSP 1528
[41][TOP]
>UniRef100_Q99366 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99366_SOYBN
Length = 625
Score = 118 bits (295), Expect = 4e-25
Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 461 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 520
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S GYSP+ P YSP+S S Y+P
Sbjct: 521 SPGYSPTSPSYSPTSPS-YSP 540
Score = 117 bits (293), Expect = 6e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 454 YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 513
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ PGYSP+S S Y+P
Sbjct: 514 SPAYSPTSPGYSPTSPS-YSP 533
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 405 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 464
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 465 SPAYSPTSPAYSPTSPS-YSP 484
Score = 116 bits (290), Expect = 1e-24
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 412 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPT 471
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 472 SPAYSPTSPSYSPTSPS-YSP 491
Score = 115 bits (289), Expect = 2e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 433 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 492
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 493 SPSYSPTSPSYSPTSPS-YSP 512
Score = 115 bits (288), Expect = 2e-24
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 475 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 534
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P Y+P S ++Y+P + P
Sbjct: 535 SPSYSPTSPSYNPQS-AKYSPSLAYSPSSP 563
Score = 114 bits (285), Expect = 5e-24
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP YSPTSP YSPTSP+YSPSSP YSP+SP S TSP YSP+SP +SP
Sbjct: 377 YSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPT 436
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 437 SPSYSPTSPSYSPTSPS-YSP 456
Score = 114 bits (284), Expect = 7e-24
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSP+SP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP
Sbjct: 370 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 429
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 430 SPSYSPTSPSYSPTSPS-YSP 449
Score = 112 bits (279), Expect = 3e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 398 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 457
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 458 SPAYSPTSPAYSPTSPA-YSP 477
Score = 111 bits (278), Expect = 4e-23
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+P S ++SPS
Sbjct: 496 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 555
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSPS P SPS S Y+P
Sbjct: 556 LAYSPSSPRLSPS--SPYSP 573
Score = 105 bits (263), Expect = 2e-21
Identities = 59/89 (66%), Positives = 64/89 (71%), Gaps = 15/89 (16%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSY-------------SPSSPTYSPSSPYNSGTS 441
+SP+SP YSPTSPSYSPTSPSYSPTSPSY SPSSP SPSSPY S TS
Sbjct: 517 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPY-SPTS 575
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSST 357
P+YSP+SP +SP S YSPS P YSPS T
Sbjct: 576 PNYSPTSPSYSPTSPSYSPSSPTYSPSRT 604
Score = 103 bits (258), Expect = 7e-21
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
FSP+S YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S +SP YSP+SP +SP
Sbjct: 362 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 421
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 422 TSPSYSPTSPSYSPTSPS-YSP 442
Score = 89.7 bits (221), Expect = 1e-16
Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 12/90 (13%)
Frame = -2
Query: 575 SPSSPYSPTSPS----------YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
SP+ SPT+ + +SPTS P YSP+SP YSPSSP YSP+SP S TSP YS
Sbjct: 340 SPNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYS 399
Query: 428 PSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
P+SP +SPS+ GYSP+ P YSP+S S Y+P
Sbjct: 400 PTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 428
Score = 82.4 bits (202), Expect = 2e-14
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS 465
R SPSSPYSPTSP+YSPTSPSYSPTSPSYSPSSPTYSPS
Sbjct: 564 RLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 602
Score = 79.0 bits (193), Expect = 3e-13
Identities = 49/89 (55%), Positives = 58/89 (65%), Gaps = 9/89 (10%)
Frame = -2
Query: 581 RFSP---SSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPT----YSPSSPYNSGTSPDYSP 426
+FSP +SPTS P YSP+SP YSP+SP YS YSP+SP S TSP YSP
Sbjct: 352 QFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYS----PTSPGYSPTSPGYSPTSPTYSP 407
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SSP +SP S YSP+ P YSP+S S Y+P
Sbjct: 408 SSPGYSPTSPAYSPTSPSYSPTSPS-YSP 435
Score = 69.7 bits (169), Expect = 2e-10
Identities = 36/59 (61%), Positives = 42/59 (71%), Gaps = 6/59 (10%)
Frame = -2
Query: 581 RFSPSSPYSPTSPS------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++SPS YSP+SP YSPTSP+YSPTSPSYSP+SP+YSPS SP YSPS
Sbjct: 551 KYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPS-------SPTYSPS 602
Score = 58.5 bits (140), Expect = 4e-07
Identities = 42/85 (49%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPT--SPSYSP-SSPTYSPSSPYNSG---TSPDYSPSSPQ 414
SPS SP T +SP ++SP SSP YSPSSP G +SP YSP+SP
Sbjct: 334 SPSYLLSPNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSP---GYSPSSPGYSPTSPG 390
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S GYSP+ P YSPSS Y+P
Sbjct: 391 YSPTSPGYSPTSPTYSPSSPG-YSP 414
Score = 58.2 bits (139), Expect = 5e-07
Identities = 39/92 (42%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG------TSPDYSPSSPQFSP 405
SP S T SPSY SP+ S T + SPY G +SP YSPSSP +SP
Sbjct: 321 SPISGTPYHEGLMSPSYL-LSPNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSPGYSP 379
Query: 404 ST-GYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
S+ GYSP+ PGYSP+S + PG
Sbjct: 380 SSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG 411
[42][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
RepID=Q30BD9_9EUKA
Length = 1852
Score = 118 bits (295), Expect = 4e-25
Identities = 62/87 (71%), Positives = 68/87 (78%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPS SPTSPSYSPTSPSYSP+SP+YSPSSP S SP YSPSSP +SPS
Sbjct: 1700 YSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPS 1759
Query: 401 T-GYSPSQPGYSPSSTS------QYTP 342
+ YSPS P YSPSS S QYTP
Sbjct: 1760 SPSYSPSSPSYSPSSPSYSPSSPQYTP 1786
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1602 YSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPT 1661
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S GYSP+ P YSP+S S Y+P
Sbjct: 1662 SPGYSPTSPSYSPTSPS-YSP 1681
Score = 115 bits (287), Expect = 3e-24
Identities = 59/89 (66%), Positives = 68/89 (76%), Gaps = 9/89 (10%)
Frame = -2
Query: 581 RFSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
R+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP
Sbjct: 1573 RYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSP 1632
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1633 TSPSYSPTSPRYSPTSPSYSPTSPS-YSP 1660
Score = 115 bits (287), Expect = 3e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1623 YSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPT 1682
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1683 SPSYSPTSPSYSPTSPS-YSP 1702
Score = 114 bits (286), Expect = 4e-24
Identities = 55/77 (71%), Positives = 64/77 (83%), Gaps = 2/77 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1637 YSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1696
Query: 404 STGYSPSQPGYSPSSTS 354
S YSP+ P YSP+S S
Sbjct: 1697 SPSYSPTSPSYSPTSPS 1713
Score = 114 bits (285), Expect = 5e-24
Identities = 57/82 (69%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1643 RYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1702
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P SP+S S Y+P
Sbjct: 1703 TSPSYSPTSPSCSPTSPS-YSP 1723
Score = 114 bits (284), Expect = 7e-24
Identities = 56/77 (72%), Positives = 64/77 (83%), Gaps = 2/77 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP SP+SP +SP
Sbjct: 1665 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPT 1724
Query: 404 STGYSPSQPGYSPSSTS 354
S YSP+ P YSPSS S
Sbjct: 1725 SPSYSPTSPSYSPSSPS 1741
Score = 114 bits (284), Expect = 7e-24
Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1672 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPT 1731
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P SP+S + Y+P +
Sbjct: 1732 SPSYSPSSPSCSPASPT-YSPSS 1753
Score = 112 bits (281), Expect = 2e-23
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
SP+SP YSPTSPSYSPTSPSYSP+SPS SP+SPTYSPSSP S +SP YSPSSP +SPS+
Sbjct: 1715 SPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSS 1774
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSPS P Y+P+S + Y+P
Sbjct: 1775 PSYSPSSPQYTPAS-ANYSP 1793
Score = 108 bits (271), Expect = 2e-22
Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTSP YS +SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+
Sbjct: 1560 YSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1619
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S GYSP+ P YSP+S +Y+P
Sbjct: 1620 SPSYSPTSPGYSPTSPSYSPTS-PRYSP 1646
Score = 107 bits (267), Expect = 7e-22
Identities = 61/90 (67%), Positives = 68/90 (75%), Gaps = 9/90 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP +YSP+SP S TSP YSPS
Sbjct: 1679 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPS 1738
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
SP SP S YSPS P YSPSS S Y+P +
Sbjct: 1739 SPSCSPASPTYSPSSPSYSPSSPS-YSPSS 1767
Score = 103 bits (258), Expect = 7e-21
Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 13/95 (13%)
Frame = -2
Query: 578 FSPSSPY-SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP-------- 426
+SPSSP SP SP+YSP+SPSYSP+SPSYSPSSP+YSPSSP S +SP Y+P
Sbjct: 1735 YSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPASANYSPP 1794
Query: 425 ----SSPQFSPSTGYSPSQPGYSPSSTSQYTPKTN 333
SSP +SP++ YSP+ P Y SS + YTP++N
Sbjct: 1795 SPLHSSPAYSPTSQYSPTSPAYGASSPA-YTPQSN 1828
Score = 101 bits (251), Expect = 5e-20
Identities = 51/87 (58%), Positives = 60/87 (68%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-- 405
++ S YSP SPSYS SP YSPTSP YS SSP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1554 YAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1613
Query: 404 ------STGYSPSQPGYSPSSTSQYTP 342
S YSP+ PGYSP+S S Y+P
Sbjct: 1614 PAYSPTSPSYSPTSPGYSPTSPS-YSP 1639
Score = 96.7 bits (239), Expect = 1e-18
Identities = 50/98 (51%), Positives = 61/98 (62%), Gaps = 9/98 (9%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSP--------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
FSP YSP+SP YSP SPSYSP SPSYS +SP YSP+SP S +SP YSP+
Sbjct: 1532 FSPHRGYSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPT 1591
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
SP +SP S YSP+ P YSP+S + + + PG
Sbjct: 1592 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPG 1629
Score = 60.5 bits (145), Expect = 9e-08
Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = -2
Query: 521 SYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQY 348
S+SP YSPSSP YSP SP ++ SP YSP+SP +S S YSP+ PGYS SS S Y
Sbjct: 1531 SFSPHR-GYSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPS-Y 1588
Query: 347 TP 342
+P
Sbjct: 1589 SP 1590
Score = 60.1 bits (144), Expect = 1e-07
Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SPSSP Y+P S +YSP SP + SSP YSP+S Y S TSP Y SSP ++P
Sbjct: 1777 YSPSSPQYTPASANYSPPSPLH---------SSPAYSPTSQY-SPTSPAYGASSPAYTPQ 1826
Query: 401 TGYSP-SQPGYSPSSTSQYTP 342
+ SP S P + S SQ +P
Sbjct: 1827 SNLSPASLPSPALSPVSQKSP 1847
[43][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NVN7_VITVI
Length = 1010
Score = 118 bits (295), Expect = 4e-25
Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 892 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 951
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S GYSP+ P YSP+S S Y+P
Sbjct: 952 SPGYSPTSPSYSPTSPS-YSP 971
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 843 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPT 902
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 903 SPAYSPTSPSYSPTSPS-YSP 922
Score = 117 bits (293), Expect = 6e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 885 YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 944
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ PGYSP+S S Y+P
Sbjct: 945 SPAYSPTSPGYSPTSPS-YSP 964
Score = 117 bits (292), Expect = 8e-25
Identities = 58/90 (64%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 906 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 965
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P Y+PSS ++Y+P + P
Sbjct: 966 SPSYSPTSPSYNPSS-AKYSPSLAYSPSSP 994
Score = 115 bits (288), Expect = 2e-24
Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP
Sbjct: 787 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 846
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 847 SPSYSPTSPSYSPTSPS-YSP 866
Score = 115 bits (288), Expect = 2e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 829 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 888
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 889 SPSYSPTSPAYSPTSPA-YSP 908
Score = 115 bits (287), Expect = 3e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 822 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 881
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 882 SPVYSPTSPSYSPTSPA-YSP 901
Score = 114 bits (286), Expect = 4e-24
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 864 YSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 923
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 924 SPSYSPTSPSYSPTSPS-YSP 943
Score = 113 bits (282), Expect = 1e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+PSS ++SPS
Sbjct: 927 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPS 986
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSPS P SPS S Y+P
Sbjct: 987 LAYSPSSPRLSPS--SPYSP 1004
Score = 112 bits (279), Expect = 3e-23
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 815 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 874
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 875 SPSYSPTSPVYSPTSPS-YSP 894
Score = 109 bits (273), Expect = 1e-22
Identities = 51/75 (68%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 808 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 867
Query: 404 STGYSPSQPGYSPSS 360
S YSP+ P YSP+S
Sbjct: 868 SPSYSPTSPSYSPTS 882
Score = 105 bits (263), Expect = 2e-21
Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
FSP+S YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP
Sbjct: 772 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 831
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 832 TSPAYSPTSPSYSPTSPS-YSP 852
Score = 87.4 bits (215), Expect = 7e-16
Identities = 47/70 (67%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSY+PSS YSPS Y S +SP SPSSP
Sbjct: 948 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAY-SPSSPRLSPSSP----- 1001
Query: 401 TGYSPSQPGY 372
YSP+ P Y
Sbjct: 1002 --YSPTSPNY 1009
Score = 87.0 bits (214), Expect = 9e-16
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
Frame = -2
Query: 542 SYSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369
++SPTS P YSP+SP YSPSSP YSP+SP S TSP YSP+SP +SP S YSPS PGYS
Sbjct: 771 AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 830
Query: 368 PSSTSQYTP 342
P+S + Y+P
Sbjct: 831 PTSPA-YSP 838
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Frame = -2
Query: 575 SPSSPYSP-TSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQ 414
SP+ SP T +SP ++SPTS SP YSPSSP G +SP YSP+SP
Sbjct: 750 SPNLRLSPITDAQFSPYVGGMAFSPTS------SPGYSPSSP---GYSPSSPGYSPTSPG 800
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKT 336
+SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 801 YSPTSPGYSPTSPGYSPTSPT-YSPSS 826
[44][TOP]
>UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5ACI7_CANAL
Length = 1728
Score = 118 bits (295), Expect = 4e-25
Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1606 YSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPT 1665
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1666 SPSYSPTSPQYSPTSPS-YSP 1685
Score = 118 bits (295), Expect = 4e-25
Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1634 YSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1693
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S QY+P + + +P
Sbjct: 1694 SPQYSPTSPQYSPTS-PQYSPGSPGYEPEP 1722
Score = 115 bits (288), Expect = 2e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1599 YSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1658
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1659 SPQYSPTSPSYSPTS-PQYSP 1678
Score = 114 bits (286), Expect = 4e-24
Identities = 58/88 (65%), Positives = 69/88 (78%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1679
Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1680 SPSYSPTSPQYSPTSPQYSPTS-PQYSP 1706
Score = 114 bits (285), Expect = 5e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSY+PTSP+YSPTSPSY+P+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1557 YAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPT 1616
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1617 SPSYSPTSPSYSPTSPS-YSP 1636
Score = 114 bits (285), Expect = 5e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1651
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1652 SPSYSPTSPQYSPTSPS-YSP 1671
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1585 YAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1644
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1645 SPSYSPTSPSYSPTS-PQYSP 1664
Score = 113 bits (282), Expect = 1e-23
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP Y+PTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1578 YSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1638 SPAYSPTSPSYSPTSPS-YSP 1657
Score = 110 bits (274), Expect = 1e-22
Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
SP YSPTSPSYSPTSPSY+PTSP+YSP+SP+Y+P+SP S TSP Y+P+SP +SP S
Sbjct: 1538 SPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSP 1597
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S QY+P
Sbjct: 1598 AYSPTSPSYSPTS-PQYSP 1615
Score = 102 bits (253), Expect = 3e-20
Identities = 56/93 (60%), Positives = 65/93 (69%), Gaps = 9/93 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS P YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPT 1700
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDN 327
SPQ+SP S YSP PGY P PK ++N
Sbjct: 1701 SPQYSPTSPQYSPGSPGYEPE-----PPKKDEN 1728
Score = 94.4 bits (233), Expect = 6e-18
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S Y+ YSPTSPSYSPTSPSY+P+SP YSP+SP + TSP YSP+SP ++P S Y
Sbjct: 1533 SPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAY 1592
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1593 SPTSPAYSPTSPS-YSP 1608
Score = 85.5 bits (210), Expect = 3e-15
Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Frame = -2
Query: 557 SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 381
S TSP Y+ YSPTSPSYSP+SP+Y+P+SP S TSP Y+P+SP +SP S Y+P+
Sbjct: 1530 SITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTS 1589
Query: 380 PGYSPSSTSQYTP 342
P YSP+S + Y+P
Sbjct: 1590 PAYSPTSPA-YSP 1601
[45][TOP]
>UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YN85_CANAL
Length = 1742
Score = 118 bits (295), Expect = 4e-25
Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1620 YSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPT 1679
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1680 SPSYSPTSPQYSPTSPS-YSP 1699
Score = 118 bits (295), Expect = 4e-25
Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1648 YSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1707
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S QY+P + + +P
Sbjct: 1708 SPQYSPTSPQYSPTS-PQYSPGSPGYEPEP 1736
Score = 115 bits (288), Expect = 2e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1613 YSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1672
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1673 SPQYSPTSPSYSPTS-PQYSP 1692
Score = 114 bits (286), Expect = 4e-24
Identities = 58/88 (65%), Positives = 69/88 (78%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1693
Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1694 SPSYSPTSPQYSPTSPQYSPTS-PQYSP 1720
Score = 114 bits (285), Expect = 5e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSY+PTSP+YSPTSPSY+P+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1571 YAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPT 1630
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650
Score = 114 bits (285), Expect = 5e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1606 YSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1665
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1666 SPSYSPTSPQYSPTSPS-YSP 1685
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1599 YAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1658
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1659 SPSYSPTSPSYSPTS-PQYSP 1678
Score = 113 bits (282), Expect = 1e-23
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP Y+PTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1592 YSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPT 1651
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1652 SPAYSPTSPSYSPTSPS-YSP 1671
Score = 109 bits (272), Expect = 2e-22
Identities = 53/81 (65%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSY+PTSP+YSPTSPSY+P+SP YSP+SP + TSP YSP+SP +SP
Sbjct: 1557 YAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPT 1616
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1617 SPSYSPTSPQYSPTSPS-YSP 1636
Score = 107 bits (267), Expect = 7e-22
Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
SP YSPTSPSYSPTSPSY+PTSP+YSP+SP+Y+P+SP S TSP Y+P+SP +SP S
Sbjct: 1538 SPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSP 1597
Query: 398 GYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S + Y+P
Sbjct: 1598 SYAPTSPAYSPTSPA-YSP 1615
Score = 102 bits (253), Expect = 3e-20
Identities = 56/93 (60%), Positives = 65/93 (69%), Gaps = 9/93 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS P YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPT 1714
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDN 327
SPQ+SP S YSP PGY P PK ++N
Sbjct: 1715 SPQYSPTSPQYSPGSPGYEPE-----PPKKDEN 1742
Score = 92.0 bits (227), Expect = 3e-17
Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S Y+ YSPTSPSYSPTSPSY+P+SP YSP+SP + TSP YSP+SP ++P S Y
Sbjct: 1533 SPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAY 1592
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P Y+P+S + Y+P
Sbjct: 1593 SPTSPSYAPTSPA-YSP 1608
Score = 86.3 bits (212), Expect = 2e-15
Identities = 42/73 (57%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = -2
Query: 557 SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 381
S TSP Y+ YSPTSPSYSP+SP+Y+P+SP S TSP Y+P+SP +SP S Y+P+
Sbjct: 1530 SITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTS 1589
Query: 380 PGYSPSSTSQYTP 342
P YSP+S S Y P
Sbjct: 1590 PAYSPTSPS-YAP 1601
[46][TOP]
>UniRef100_Q8SSC4 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Encephalitozoon
cuniculi RepID=RPB1_ENCCU
Length = 1599
Score = 118 bits (295), Expect = 4e-25
Identities = 59/82 (71%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1465 RLSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1524
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1525 TSPSYSPTSPSYSPTSPS-YSP 1545
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1487 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1546
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1547 SPSYSPTSPSYSPTSPS-YSP 1566
Score = 106 bits (265), Expect = 1e-21
Identities = 54/87 (62%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP
Sbjct: 1508 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP----- 1562
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKD 321
YSP+ P YS S +S + N+D
Sbjct: 1563 -SYSPTSPSYSVSMSSFSNKNKSKNQD 1588
Score = 80.9 bits (198), Expect = 7e-14
Identities = 49/109 (44%), Positives = 62/109 (56%), Gaps = 30/109 (27%)
Frame = -2
Query: 578 FSPSSPYSP-----TSPSYSPTSP------------------------SYSPTSPSYSPS 486
F P+ P +P +S S+S +S SYSPTSPSYSP+
Sbjct: 1424 FKPNEPATPVISTPSSDSFSISSGNWSPTHLEMAYSRDLGERLSPTSPSYSPTSPSYSPT 1483
Query: 485 SPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1484 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1531
[47][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase II subunit A) (DNA-directed RNA polymerase III
largest subunit) n=1 Tax=Equus caballus
RepID=UPI0001796DD3
Length = 1834
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 112 bits (281), Expect = 2e-23
Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
S YSP+ P YSP++ S + + PG
Sbjct: 1780 SPNYSPTSPSYSPTTPSYSPTSPSYSPTSPG 1810
Score = 112 bits (281), Expect = 2e-23
Identities = 53/81 (65%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP+YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP+
Sbjct: 1734 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPT 1793
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
T YSP+ P YSP+S Y+P
Sbjct: 1794 TPSYSPTSPSYSPTSPG-YSP 1813
Score = 112 bits (281), Expect = 2e-23
Identities = 54/89 (60%), Positives = 68/89 (76%), Gaps = 2/89 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP++P +SP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPT 1800
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
S YSP+ PGYSP+S + + DD
Sbjct: 1801 SPSYSPTSPGYSPTSPTYSLTSPAISPDD 1829
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 100 bits (248), Expect = 1e-19
Identities = 47/78 (60%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSP+Y+PTSP+YSP+SP+YSP++P S TSP YSP+SP +SP
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSPTSPGYSPT 1814
Query: 404 STGYSPSQPGYSPSSTSQ 351
S YS + P SP + +
Sbjct: 1815 SPTYSLTSPAISPDDSDE 1832
Score = 96.7 bits (239), Expect = 1e-18
Identities = 52/92 (56%), Positives = 68/92 (73%), Gaps = 6/92 (6%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQ 414
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP SP T+P YSP+SP
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP----TTPSYSPTSPS 1803
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTNDNKD 321
+SP S GYSP+ P YS +S + +P +D ++
Sbjct: 1804 YSPTSPGYSPTSPTYSLTSPA-ISPDDSDEEN 1834
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624
[48][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF13
Length = 1932
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1700 SPSYSPTSPNYSPTSPN-YTP 1719
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1591 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1651 SPSYSPTSPSYSPTSPS-YSP 1670
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1658 SPSYSPTSPSYSPTSPS-YSP 1677
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1679 SPSYSPTSPSYSPTSPS-YSP 1698
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1685
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1686 SPSYSPTSPSYSPTSPS-YSP 1705
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1720
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1721 SPSYSPTSPSYSPTSPN-YTP 1740
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1692
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1693 SPSYSPTSPSYSPTSPN-YSP 1712
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1654 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1713
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1714 SPNYTPTSPSYSPTSPS-YSP 1733
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1570 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1741
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1742 SPNYSPTSPSYSPTSPS-YSP 1761
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 1738 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1797
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1798 SPKYTPTSPSYSPSS-PEYTP 1817
Score = 113 bits (282), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP
Sbjct: 1703 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1762
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P Y+P S + YTP +
Sbjct: 1763 SPSYSPSSPRYTPQSPT-YTPSS 1784
Score = 112 bits (279), Expect = 3e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1710 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1769
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 1770 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1796
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1821 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1880
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1881 TSPKYSPTSPTYSPTSPKGSTYSP 1904
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1780 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1839
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1840 SPTYSPTTPKYSPTSPT-YSP 1859
Score = 108 bits (270), Expect = 3e-22
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1772 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1831
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1832 TSPKYSPTSPTYSP-TTPKYSP 1852
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1808 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1867
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1868 SPKYSPTSPTYSPTS-PKYSP 1887
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1835 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1894
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1895 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1927
Score = 104 bits (260), Expect = 4e-21
Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1759 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1818
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1819 SPKYSPTSPKYSPTS-PKYSP 1838
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1800 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1859
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1860 TSPVYTPTSPKYSPTSPT-YSP 1880
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1539 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1598
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1599 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P
Sbjct: 1717 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1776
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 1777 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1803
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+
Sbjct: 1745 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1804
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1805 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1831
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1849 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1908
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1909 YSPTSPTYSLTSPAISPDDSDE 1930
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1508 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1560
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1561 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1586
[49][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF12
Length = 1970
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855
Score = 113 bits (282), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822
Score = 112 bits (279), Expect = 3e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897
Score = 108 bits (270), Expect = 3e-22
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965
Score = 104 bits (260), Expect = 4e-21
Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624
[50][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
Length = 1970
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855
Score = 113 bits (282), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822
Score = 112 bits (279), Expect = 3e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897
Score = 108 bits (270), Expect = 3e-22
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965
Score = 104 bits (260), Expect = 4e-21
Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869
Score = 67.0 bits (162), Expect = 1e-09
Identities = 36/54 (66%), Positives = 42/54 (77%), Gaps = 4/54 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSP---SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SP+SP YSPTSP+YSPTSP +YSPTSP YSP+SPTYS +SP SPD S
Sbjct: 1916 YSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISPDDS 1966
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624
[51][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 13 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B22
Length = 1722
Score = 117 bits (294), Expect = 5e-25
Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1528 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1587
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S S N + P
Sbjct: 1588 SPSYSPTSPSYSPTSPSYSPTSPNYSPSSP 1617
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1493 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1552
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1553 SPSYSPTSPSYSPTSPS-YSP 1572
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1500 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1559
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1560 SPSYSPTSPSYSPTSPS-YSP 1579
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1521 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1580
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1581 SPSYSPTSPSYSPTSPS-YSP 1600
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1542 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPSS +Y+P
Sbjct: 1602 SPSYSPTSPNYSPSS-PKYSP 1621
Score = 117 bits (292), Expect = 8e-25
Identities = 58/83 (69%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1615
Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336
+ YSP+ P YSP+S + Y+P T
Sbjct: 1616 SPKYSPTSPKYSPTSPT-YSPTT 1637
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 70/81 (86%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPSSP++SP
Sbjct: 1563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPT 1622
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1623 SPKYSPTSPTYSP-TTPKYSP 1642
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1472 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1531
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1532 SPSYSPTSPSYSPTSPS-YSP 1551
Score = 111 bits (277), Expect = 5e-23
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSPSSP YSP+SP S TSP YSP++P++SP
Sbjct: 1584 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1643
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y+P+S +Y+P
Sbjct: 1644 SPTYSPTSPVYTPTS-PKYSP 1663
Score = 110 bits (276), Expect = 6e-23
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1612 YSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1671
Query: 404 STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1672 SPKYSPTSPTYSPTSPKGSTYSP 1694
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1625 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1684
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1685 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1717
Score = 105 bits (261), Expect = 3e-21
Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP YSPTSP YSPTSP+YSP++P YSP+SP S TSP Y+P+SP++SP
Sbjct: 1605 YSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1664
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1665 SPTYSPTSPKYSPTSPT-YSP 1684
Score = 102 bits (254), Expect = 2e-20
Identities = 55/92 (59%), Positives = 62/92 (67%), Gaps = 16/92 (17%)
Frame = -2
Query: 569 SSPYSPTS---------------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
S YSPTS PSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP
Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1513
Query: 434 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1544
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1639 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1698
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1699 YSPTSPTYSLTSPAISPDDSDE 1720
[52][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
RepID=UPI0000546D90
Length = 1972
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1741
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1742 SPSYSPTSPSYSPTSPN-YTP 1761
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1633 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1692
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1693 SPSYSPTSPSYSPTSPS-YSP 1712
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1700 SPSYSPTSPSYSPTSPS-YSP 1719
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1720
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1721 SPSYSPTSPSYSPTSPS-YSP 1740
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1734
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1735 SPSYSPTSPSYSPTSPS-YSP 1754
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP
Sbjct: 1710 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPT 1769
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1770 SPSYSPTSPSYSPTSPN-YTP 1789
Score = 116 bits (291), Expect = 1e-24
Identities = 56/83 (67%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP+Y+PTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP
Sbjct: 1738 YSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1797
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSPSS +YTP++
Sbjct: 1798 SPSYSPTSPSYSPSS-PRYTPQS 1819
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1679 SPSYSPTSPSYSPTSPS-YSP 1698
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP ++P
Sbjct: 1703 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPT 1762
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1763 SPSYSPTSPSYSPTSPS-YSP 1782
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1612 YTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1671
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691
Score = 113 bits (282), Expect = 1e-23
Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SPS
Sbjct: 1752 YSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPS 1811
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 1812 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1838
Score = 112 bits (280), Expect = 2e-23
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP Y+PTSP+YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 1780 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1839
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1840 SPKYTPTSPSYSPSS-PEYTP 1859
Score = 111 bits (277), Expect = 5e-23
Identities = 54/100 (54%), Positives = 74/100 (74%), Gaps = 12/100 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP+YSPT+P YSPTSP+YSP+SPTY+P+SP S TSP YSP+SP++SP
Sbjct: 1870 KYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSP 1929
Query: 404 S-----------TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + Y+P + + D
Sbjct: 1930 TSPTYSPTSPKGSTYSPTSPGYSPTSPT-YSPAISPDDSD 1968
Score = 110 bits (274), Expect = 1e-22
Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
SP Y+P SP YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S
Sbjct: 1607 SPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1666
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1667 SYSPTSPSYSPTSPS-YSP 1684
Score = 110 bits (274), Expect = 1e-22
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1863 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSP 1922
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1923 TSPKYSPTSPTYSPTSPKGSTYSP 1946
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1822 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1881
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1882 SPTYSPTTPKYSPTSPT-YSP 1901
Score = 108 bits (270), Expect = 3e-22
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1814 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1873
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1874 TSPKYSPTSPTYSP-TTPKYSP 1894
Score = 108 bits (270), Expect = 3e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1850 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPT 1909
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1910 SPKYSPTSPTYSPTS-PKYSP 1929
Score = 104 bits (260), Expect = 4e-21
Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1801 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1860
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1861 SPKYSPTSPKYSPTS-PKYSP 1880
Score = 103 bits (257), Expect = 1e-20
Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTSPSYSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+
Sbjct: 1717 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPT 1776
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S Y+P+ P YSP+S S Y+P
Sbjct: 1777 SPSYSPTSPNYTPTSPNYSPTSPS-YSP 1803
Score = 103 bits (256), Expect = 1e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1842 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1901
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1902 TSPTYTPTSPKYSPTSPT-YSP 1922
Score = 102 bits (253), Expect = 3e-20
Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPS--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP Y P SP Y+P SP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +S
Sbjct: 1596 YSPTSPAYEPRSPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYS 1655
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S S Y+P
Sbjct: 1656 PTSPSYSPTSPSYSPTSPS-YSP 1677
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS PSYSPTSP+Y+PTSP+YSP+SP+YSP+SP S +SP Y+P
Sbjct: 1759 YTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQ 1818
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 1819 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1845
Score = 93.6 bits (231), Expect = 1e-17
Identities = 50/88 (56%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+
Sbjct: 1787 YTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1846
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1847 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1873
Score = 83.2 bits (204), Expect = 1e-14
Identities = 46/90 (51%), Positives = 56/90 (62%), Gaps = 13/90 (14%)
Frame = -2
Query: 572 PSSPYSPT-----------SPSYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDY 432
P+SPY P+ SP+YSPTSP+Y P SP Y+P SP YSP+SP S TSP Y
Sbjct: 1574 PASPYIPSPGYITLHFGALSPNYSPTSPAYEPRSPGGGYTPQSPGYSPTSPSYSPTSPSY 1633
Query: 431 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
SP+SP YSP+ P YSP+S S Y+P
Sbjct: 1634 SPTSPN------YSPTSPSYSPTSPS-YSP 1656
[53][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25C
Length = 1968
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1680 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1739
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1740 SPSYSPTSPNYSPTSPN-YTP 1759
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1631 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1690
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1691 SPSYSPTSPSYSPTSPS-YSP 1710
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1697
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1698 SPSYSPTSPSYSPTSPS-YSP 1717
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1659 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1718
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1719 SPSYSPTSPSYSPTSPS-YSP 1738
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1666 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1725
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1726 SPSYSPTSPSYSPTSPS-YSP 1745
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1760
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1761 SPSYSPTSPSYSPTSPN-YTP 1780
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1673 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1732
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1733 SPSYSPTSPSYSPTSPN-YSP 1752
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1694 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1753
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1754 SPNYTPTSPSYSPTSPS-YSP 1773
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1610 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1669
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1670 SPSYSPTSPSYSPTSPS-YSP 1689
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P
Sbjct: 1722 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1781
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1782 SPNYSPTSPSYSPTSPS-YSP 1801
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 1778 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1837
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1838 SPKYTPTSPSYSPSS-PEYTP 1857
Score = 113 bits (282), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP
Sbjct: 1743 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1802
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P Y+P S + YTP +
Sbjct: 1803 SPSYSPSSPRYTPQSPT-YTPSS 1824
Score = 112 bits (279), Expect = 3e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1750 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1809
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 1810 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1836
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1861 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1920
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1921 TSPKYSPTSPTYSPTSPKGSTYSP 1944
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1820 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1879
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1880 SPTYSPTTPKYSPTSPT-YSP 1899
Score = 108 bits (270), Expect = 3e-22
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1812 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1871
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1872 TSPKYSPTSPTYSP-TTPKYSP 1892
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1848 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1907
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1908 SPKYSPTSPTYSPTS-PKYSP 1927
Score = 107 bits (266), Expect = 9e-22
Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1875 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1934
Query: 404 S----TGYSPSQPGYSPSS 360
+ + YSP+ PGYSP+S
Sbjct: 1935 TSPKGSTYSPTSPGYSPTS 1953
Score = 104 bits (260), Expect = 4e-21
Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1799 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1858
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1859 SPKYSPTSPKYSPTS-PKYSP 1878
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1840 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1899
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1900 TSPVYTPTSPKYSPTSPT-YSP 1920
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1579 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1638
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1639 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1675
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P
Sbjct: 1757 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1816
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 1817 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1843
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+
Sbjct: 1785 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1844
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1845 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1871
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1548 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1600
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1601 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1626
[54][TOP]
>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25B
Length = 1932
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1700 SPSYSPTSPNYSPTSPN-YTP 1719
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1591 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1651 SPSYSPTSPSYSPTSPS-YSP 1670
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1658 SPSYSPTSPSYSPTSPS-YSP 1677
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1679 SPSYSPTSPSYSPTSPS-YSP 1698
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1685
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1686 SPSYSPTSPSYSPTSPS-YSP 1705
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1720
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1721 SPSYSPTSPSYSPTSPN-YTP 1740
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1692
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1693 SPSYSPTSPSYSPTSPN-YSP 1712
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1654 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1713
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1714 SPNYTPTSPSYSPTSPS-YSP 1733
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1570 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1741
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1742 SPNYSPTSPSYSPTSPS-YSP 1761
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 1738 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1797
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1798 SPKYTPTSPSYSPSS-PEYTP 1817
Score = 113 bits (282), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP
Sbjct: 1703 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1762
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P Y+P S + YTP +
Sbjct: 1763 SPSYSPSSPRYTPQSPT-YTPSS 1784
Score = 112 bits (279), Expect = 3e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1710 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1769
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 1770 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1796
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1821 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1880
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1881 TSPKYSPTSPTYSPTSPKGSTYSP 1904
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1780 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1839
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1840 SPTYSPTTPKYSPTSPT-YSP 1859
Score = 108 bits (270), Expect = 3e-22
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1772 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1831
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1832 TSPKYSPTSPTYSP-TTPKYSP 1852
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1808 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1867
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1868 SPKYSPTSPTYSPTS-PKYSP 1887
Score = 107 bits (266), Expect = 9e-22
Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1835 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1894
Query: 404 S----TGYSPSQPGYSPSS 360
+ + YSP+ PGYSP+S
Sbjct: 1895 TSPKGSTYSPTSPGYSPTS 1913
Score = 104 bits (260), Expect = 4e-21
Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1759 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1818
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1819 SPKYSPTSPKYSPTS-PKYSP 1838
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1800 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1859
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1860 TSPVYTPTSPKYSPTSPT-YSP 1880
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1539 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1598
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1599 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P
Sbjct: 1717 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1776
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 1777 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1803
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+
Sbjct: 1745 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1804
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1805 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1831
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1849 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1908
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1909 YSPTSPTYSLTSPAISPEDSDE 1930
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1508 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1560
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1561 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1586
[55][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Rattus norvegicus RepID=UPI0000DA33D8
Length = 1970
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855
Score = 113 bits (282), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822
Score = 112 bits (279), Expect = 3e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897
Score = 108 bits (270), Expect = 3e-22
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925
Score = 107 bits (266), Expect = 9e-22
Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Query: 404 S----TGYSPSQPGYSPSS 360
+ + YSP+ PGYSP+S
Sbjct: 1933 TSPKGSTYSPTSPGYSPTS 1951
Score = 104 bits (260), Expect = 4e-21
Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1947 YSPTSPTYSLTSPAISPEDSDE 1968
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624
[56][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
RepID=O35559_CRIGR
Length = 1970
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855
Score = 113 bits (282), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822
Score = 112 bits (279), Expect = 3e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897
Score = 108 bits (270), Expect = 3e-22
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965
Score = 104 bits (260), Expect = 4e-21
Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624
[57][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
Length = 1966
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855
Score = 113 bits (282), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822
Score = 112 bits (279), Expect = 3e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPT 1877
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897
Score = 107 bits (267), Expect = 7e-22
Identities = 53/94 (56%), Positives = 71/94 (75%), Gaps = 7/94 (7%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Query: 404 S----TGYSPSQPGYSPSST--SQYTPKTNDNKD 321
+ + YSP+ PGYSP+S S +P +D ++
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISDEEN 1966
Score = 106 bits (265), Expect = 1e-21
Identities = 51/82 (62%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSP 1869
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890
Score = 106 bits (264), Expect = 1e-21
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+P SP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1846 YSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925
Score = 105 bits (262), Expect = 3e-21
Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSP YSPTSP YSPTSP+YSP++P YSP+SP S TSP Y+P+SP++SP
Sbjct: 1853 YTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1913 SPTYSPTSPKYSPTSPT-YSP 1932
Score = 104 bits (260), Expect = 4e-21
Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPA 1856
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876
Score = 100 bits (250), Expect = 6e-20
Identities = 48/82 (58%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+P SP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPASPKYSPTS-PKYSP 1869
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624
[58][TOP]
>UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7PJA3_IXOSC
Length = 1937
Score = 117 bits (294), Expect = 5e-25
Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP+S S Y+P +
Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSPSS 1723
Score = 117 bits (294), Expect = 5e-25
Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P+SP S TSP YSP+SP +SP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPT 1750
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSPSS + Y+P++
Sbjct: 1751 SPSYSPTSPSYSPSSPN-YSPQS 1772
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSPS P Y+P+S S Y+P
Sbjct: 1716 SPSYSPSSPNYTPASPS-YSP 1735
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1722
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
+ Y+P+ P YSP+S S Y+P
Sbjct: 1723 SPNYTPASPSYSPTSPS-YSP 1742
Score = 116 bits (291), Expect = 1e-24
Identities = 59/89 (66%), Positives = 69/89 (77%), Gaps = 8/89 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
++P+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSPSSP S SP YSP SP +SPS
Sbjct: 1726 YTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPS 1785
Query: 401 T-GYSPSQPGYSPSSTS------QYTPKT 336
+ YSP+ P YSP+S S QYTP +
Sbjct: 1786 SPKYSPTSPSYSPTSPSYSPGSPQYTPSS 1814
Score = 115 bits (289), Expect = 2e-24
Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP YSP+SP +SP
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPT 1743
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP+S S Y+P +
Sbjct: 1744 SPSYSPTSPSYSPTSPS-YSPSS 1765
Score = 114 bits (285), Expect = 5e-24
Identities = 56/82 (68%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSPSYSP+SP YSPTSP YSP+SPTY+PSSP S TSP YSP+SPQ+SP
Sbjct: 1816 KYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSP 1875
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1876 TSPKYSPTSPKYSPTSPT-YSP 1896
Score = 114 bits (284), Expect = 7e-24
Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+P+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1608 TPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1668 PSYSPTSPSYSPTSPS-YSP 1686
Score = 112 bits (280), Expect = 2e-23
Identities = 56/83 (67%), Positives = 66/83 (79%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP SP YSP+SP YSPTSPSYSPTSPSYSP SP Y+PSSP S TSP YSP+SP +SPS
Sbjct: 1775 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPS 1834
Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336
+ YSP+ P YSP+S + YTP +
Sbjct: 1835 SPKYSPTSPKYSPTSPT-YTPSS 1856
Score = 112 bits (279), Expect = 3e-23
Identities = 54/83 (65%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SP+Y+P SPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1705 YSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1764
Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336
+ YSP P YSP S S Y+P +
Sbjct: 1765 SPNYSPQSPSYSPGSPS-YSPSS 1786
Score = 112 bits (279), Expect = 3e-23
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 5/84 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
++PSSP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP+
Sbjct: 1852 YTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1911
Query: 401 ----TGYSPSQPGYSPSSTSQYTP 342
+ YSP+ PGYSPSS + Y+P
Sbjct: 1912 SPKGSSYSPTSPGYSPSSPT-YSP 1934
Score = 109 bits (273), Expect = 1e-22
Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP +P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1600 YAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1659
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1660 SPSYSPTSPSYSPTSPS-YSP 1679
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP SP Y+P+SP YSPTSP+YSPTSPSYSPSSP YSP+SP S TSP Y+PSSP++SP
Sbjct: 1803 YSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPT 1862
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1863 SPQYSPTSPQYSPTS-PKYSP 1882
Score = 108 bits (270), Expect = 3e-22
Identities = 53/81 (65%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+P+SPS +P SP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1593 YSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPT 1652
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672
Score = 107 bits (268), Expect = 5e-22
Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP+Y+P+SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1837 KYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSP 1896
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1897 TSPKYSPTSPTYSPTSPKGSSYSP 1920
Score = 107 bits (267), Expect = 7e-22
Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSP SPSYSP SPSYSP+SP YSP+SP+YSP+SP S SP Y+PSSP++SP
Sbjct: 1761 YSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPT 1820
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPSS +Y+P
Sbjct: 1821 SPTYSPTSPSYSPSS-PKYSP 1840
Score = 107 bits (266), Expect = 9e-22
Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP SP YSP SPSYSP+SP YSPTSPSYSP+SP+YSP SP + +SP YSP+SP +SP
Sbjct: 1768 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPT 1827
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSPS P YSP+S +Y+P
Sbjct: 1828 SPSYSPSSPKYSPTS-PKYSP 1847
Score = 102 bits (255), Expect = 2e-20
Identities = 50/80 (62%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SP SP YSP+SP+Y+P+SPS +P SP+YSP+SP+YSP+SP S TSP+YSP+SP +SP S
Sbjct: 1587 SPVSPNYSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTS 1646
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1647 PSYSPTSPSYSPTSPS-YSP 1665
Score = 100 bits (250), Expect = 6e-20
Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423
+SPSSP YSPTSPSYSPTSPSYSP SP Y+ P+SPTYSP+SP S +SP YSP+
Sbjct: 1782 YSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPT 1841
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP++SP S Y+PS P YSP+S QY+P
Sbjct: 1842 SPKYSPTSPTYTPSSPKYSPTS-PQYSP 1868
Score = 99.4 bits (246), Expect = 2e-19
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTSPSYSP +SP+YSP SPSYSP SP+YSPSSP S TSP YSP+
Sbjct: 1740 YSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPT 1799
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S Y+PS P YSP+S + Y+P
Sbjct: 1800 SPSYSPGSPQYTPSSPKYSPTSPT-YSP 1826
Score = 99.4 bits (246), Expect = 2e-19
Identities = 51/78 (65%), Positives = 59/78 (75%), Gaps = 4/78 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1865 QYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSP- 1923
Query: 413 FSPSTGYSPSQPGYSPSS 360
GYSPS P YSP+S
Sbjct: 1924 -----GYSPSSPTYSPTS 1936
Score = 95.9 bits (237), Expect = 2e-18
Identities = 49/80 (61%), Positives = 59/80 (73%), Gaps = 12/80 (15%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ--- 414
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SPTYSP+SP S TSP YSP+SP+
Sbjct: 1858 KYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSS 1917
Query: 413 -------FSPSTG-YSPSQP 378
+SPS+ YSP+ P
Sbjct: 1918 YSPTSPGYSPSSPTYSPTSP 1937
Score = 64.7 bits (156), Expect = 5e-09
Identities = 44/86 (51%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Frame = -2
Query: 578 FSPS-----SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTY-SPSSPYNSGTSPDYSPSSP 417
FSPS S YSP S SP S P SP+ SP+SP SP SP S +SP Y+PSSP
Sbjct: 1547 FSPSAASDASGYSPASAGLSP-GWSPQPGSPASSPASPYIPSPVSPNYSPSSPAYAPSSP 1605
Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342
+P S YSP+ P YSP+S S Y+P
Sbjct: 1606 SMTPASPTYSPTSPSYSPTSPS-YSP 1630
[59][TOP]
>UniRef100_B4DET1 cDNA FLJ53860, highly similar to DNA-directed RNA polymerase II
largest subunit (EC 2.7.7.6) n=1 Tax=Homo sapiens
RepID=B4DET1_HUMAN
Length = 855
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 636
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 637 SPSYSPTSPNYSPTSPN-YTP 656
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 528 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 587
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 588 SPSYSPTSPSYSPTSPS-YSP 607
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 535 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 594
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 595 SPSYSPTSPSYSPTSPS-YSP 614
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 615
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 616 SPSYSPTSPSYSPTSPS-YSP 635
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 622
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 623 SPSYSPTSPSYSPTSPS-YSP 642
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 657
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 658 SPSYSPTSPSYSPTSPN-YTP 677
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 629
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 630 SPSYSPTSPSYSPTSPN-YSP 649
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 650
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 651 SPNYTPTSPSYSPTSPS-YSP 670
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 507 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 566
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 567 SPSYSPTSPSYSPTSPS-YSP 586
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P
Sbjct: 619 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 678
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 679 SPNYSPTSPSYSPTSPS-YSP 698
Score = 113 bits (282), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP
Sbjct: 640 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 699
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P Y+P S + YTP +
Sbjct: 700 SPSYSPSSPRYTPQSPT-YTPSS 721
Score = 112 bits (279), Expect = 3e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 647 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 706
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 707 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 733
Score = 109 bits (273), Expect = 1e-22
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 675 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 734
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S +Y+P
Sbjct: 735 SPKYTPTSPKYSPTS-PKYSP 754
Score = 108 bits (271), Expect = 2e-22
Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+ P +SP
Sbjct: 744 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSP 803
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 804 TSPKYSPTSPTYSPTSPKGSTYSP 827
Score = 108 bits (269), Expect = 4e-22
Identities = 53/82 (64%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 709 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 768
Query: 404 ST-GYSPSQPGYSPSSTSQYTP 342
+T YSP+ P YSP+S YTP
Sbjct: 769 TTPKYSPTSPTYSPTS-PVYTP 789
Score = 106 bits (264), Expect = 1e-21
Identities = 52/81 (64%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 731 YSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 790
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 791 SPKYSPTGPTYSPTS-PKYSP 810
Score = 105 bits (263), Expect = 2e-21
Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+ P S TSP YSP+SP +SP
Sbjct: 758 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSP 817
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 818 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 850
Score = 104 bits (259), Expect = 6e-21
Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSP+SP++SP
Sbjct: 696 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPT 755
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 756 SPKYSPTSPTYSP-TTPKYSP 775
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 476 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 535
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 536 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 572
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P
Sbjct: 654 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 713
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 714 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 740
Score = 92.4 bits (228), Expect = 2e-17
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPT P+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 772 KYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 831
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 832 YSPTSPTYSLTSPAISPDDSDE 853
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 445 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 497
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 498 AYEPRSPGGYTPQSPSYSPTSPS-YSP 523
[60][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
Length = 1970
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPA 1835
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855
Score = 113 bits (282), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822
Score = 112 bits (279), Expect = 3e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925
Score = 107 bits (267), Expect = 7e-22
Identities = 53/81 (65%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSP SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1818 YTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965
Score = 106 bits (265), Expect = 1e-21
Identities = 51/82 (62%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSP SP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890
Score = 104 bits (260), Expect = 4e-21
Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPT 1856
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPAS-PKYTP 1841
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968
Score = 92.8 bits (229), Expect = 2e-17
Identities = 50/88 (56%), Positives = 66/88 (75%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPT 1842
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624
[61][TOP]
>UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DXL0_ZYGRC
Length = 1744
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP +SP
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPT 1681
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1682 SPSYSPTSPSYSPTSPS-YSP 1701
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1640 SPSYSPTSPSYSPTSPS-YSP 1659
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1647 SPSYSPTSPSYSPTSPS-YSP 1666
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1661 SPSYSPTSPNYSPTSPS-YSP 1680
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 116 bits (291), Expect = 1e-24
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1559 YSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1619 SPSYSPTSPSYSPTSPS-YSP 1638
Score = 116 bits (290), Expect = 1e-24
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSPSSP YSPTSPSYSPTSPSYSP SP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1538 FSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1598 SPSYSPTSPSYSPTSPS-YSP 1617
Score = 115 bits (289), Expect = 2e-24
Identities = 59/98 (60%), Positives = 72/98 (73%), Gaps = 11/98 (11%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 404 STGYSPSQPGYSPSST---------SQYTPKTNDNKDD 318
S YSP+ P YSP+S S +PK +D + D
Sbjct: 1703 SPSYSPTSPSYSPTSPNYSPGSPTYSPSSPKQDDREKD 1740
Score = 107 bits (268), Expect = 5e-22
Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -2
Query: 569 SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
SSP +SP+SP+YSPTSPSYSPTSPSYSP SP YSP+SP S TSP YSP+SP +SP S
Sbjct: 1534 SSPGFSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1593
Query: 395 YSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1594 YSPTSPSYSPTSPS-YSP 1610
[62][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
RepID=RPB1_MOUSE
Length = 1970
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855
Score = 113 bits (282), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822
Score = 112 bits (279), Expect = 3e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPT 1877
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965
Score = 106 bits (265), Expect = 1e-21
Identities = 51/82 (62%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSP 1869
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890
Score = 106 bits (264), Expect = 1e-21
Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+P SP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1846 YSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925
Score = 105 bits (262), Expect = 3e-21
Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSP YSPTSP YSPTSP+YSP++P YSP+SP S TSP Y+P+SP++SP
Sbjct: 1853 YTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1913 SPTYSPTSPKYSPTSPT-YSP 1932
Score = 104 bits (260), Expect = 4e-21
Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPA 1856
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876
Score = 100 bits (250), Expect = 6e-20
Identities = 48/82 (58%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+P SP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPASPKYSPTS-PKYSP 1869
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624
[63][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Euarchontoglires
RepID=RPB1_HUMAN
Length = 1970
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855
Score = 113 bits (282), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P Y+P S + YTP +
Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822
Score = 112 bits (279), Expect = 3e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897
Score = 108 bits (270), Expect = 3e-22
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965
Score = 104 bits (260), Expect = 4e-21
Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624
[64][TOP]
>UniRef100_P11414 DNA-directed RNA polymerase II subunit RPB1 (Fragment) n=1
Tax=Cricetulus griseus RepID=RPB1_CRIGR
Length = 467
Score = 117 bits (294), Expect = 5e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 175 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 234
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 235 SPSYSPTSPNYSPTSPN-YTP 254
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 126 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 185
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 186 SPSYSPTSPSYSPTSPS-YSP 205
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 133 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 192
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 193 SPSYSPTSPSYSPTSPS-YSP 212
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 154 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 213
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 214 SPSYSPTSPSYSPTSPS-YSP 233
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 161 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 220
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 221 SPSYSPTSPSYSPTSPS-YSP 240
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 196 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 255
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 256 SPSYSPTSPSYSPTSPN-YTP 275
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 168 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 227
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 228 SPSYSPTSPSYSPTSPN-YSP 247
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 189 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 248
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 249 SPNYTPTSPSYSPTSPS-YSP 268
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 105 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 164
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 165 SPSYSPTSPSYSPTSPS-YSP 184
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P
Sbjct: 217 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 276
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 277 SPNYSPTSPSYSPTSPS-YSP 296
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 273 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 332
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 333 SPKYTPTSPSYSPSS-PEYTP 352
Score = 113 bits (282), Expect = 1e-23
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP
Sbjct: 238 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 297
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P Y+P S + YTP +
Sbjct: 298 SPSYSPSSPRYTPQSPT-YTPSS 319
Score = 112 bits (279), Expect = 3e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 245 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 304
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 305 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 331
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 356 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 415
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 416 TSPKYSPTSPTYSPTSPKGSTYSP 439
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 315 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 374
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 375 SPTYSPTTPKYSPTSPT-YSP 394
Score = 108 bits (270), Expect = 3e-22
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 307 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 366
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 367 TSPKYSPTSPTYSP-TTPKYSP 387
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 343 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 402
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 403 SPKYSPTSPTYSPTS-PKYSP 422
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 370 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 429
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 430 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 462
Score = 104 bits (260), Expect = 4e-21
Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 294 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 353
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 354 SPKYSPTSPKYSPTS-PKYSP 373
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 335 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 394
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 395 TSPVYTPTSPKYSPTSPT-YSP 415
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 74 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 133
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 134 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 170
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P
Sbjct: 252 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 311
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 312 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 338
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+
Sbjct: 280 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 339
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ Y+P+ P YSP+S +Y+P
Sbjct: 340 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 366
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 384 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 443
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 444 YSPTSPTYSLTSPAISPDDSDE 465
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 43 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 95
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 96 AYEPRSPGGYTPQSPSYSPTSPS-YSP 121
[65][TOP]
>UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis
RepID=UPI000186D846
Length = 1885
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1601 YSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1661 SPSYSPTSPSYSPTSPS-YSP 1680
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694
Score = 116 bits (291), Expect = 1e-24
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1594 YSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673
Score = 116 bits (291), Expect = 1e-24
Identities = 55/80 (68%), Positives = 68/80 (85%), Gaps = 2/80 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPS 1716
Query: 401 T-GYSPSQPGYSPSSTSQYT 345
+ Y+P+ P +SP+S S Y+
Sbjct: 1717 SPNYTPASPSFSPTSPSLYS 1736
Score = 116 bits (290), Expect = 1e-24
Identities = 56/77 (72%), Positives = 65/77 (84%), Gaps = 2/77 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 404 STGYSPSQPGYSPSSTS 354
S YSP+ P YSP+S S
Sbjct: 1682 SPSYSPTSPSYSPTSPS 1698
Score = 115 bits (289), Expect = 2e-24
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-P 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +S
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRT 1702
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPSS + YTP
Sbjct: 1703 SPSYSPTSPSYSPSSPN-YTP 1722
Score = 114 bits (285), Expect = 5e-24
Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YS + P YSP+S S Y+P +
Sbjct: 1696 SPSYSRTSPSYSPTSPS-YSPSS 1717
Score = 110 bits (274), Expect = 1e-22
Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
F+P+SP YSPTSPSYSP+SP+YSP SPSYSP+SP+YSP+SP S TSP YSP+
Sbjct: 1573 FAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1659
Score = 108 bits (269), Expect = 4e-22
Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP ++PTSPS +PTS +YSPTSPSYSPSSP YSP+SP S TSP YSP+SP +SP
Sbjct: 1566 YSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPT 1625
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645
Score = 108 bits (269), Expect = 4e-22
Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYS +SP+YSP+SP S +SP+Y+P+SP FSP
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPT 1730
Query: 404 ------STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP S +Y+P
Sbjct: 1731 SPSLYSSPRYSPASPSYSPGS-PKYSP 1756
Score = 107 bits (267), Expect = 7e-22
Identities = 59/93 (63%), Positives = 67/93 (72%), Gaps = 14/93 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD------YSPSS 420
+SP+SP YSPTSPSYS TSPSYSPTSPSYSPSSP Y+P+SP S TSP YSP+S
Sbjct: 1685 YSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPAS 1744
Query: 419 PQFSP-STGYSPSQPGYSPSSTS------QYTP 342
P +SP S YSP+ P YSP+S S QYTP
Sbjct: 1745 PSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTP 1777
Score = 107 bits (266), Expect = 9e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 9/91 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP SP YSPTSPSYSPTSPSY+ SP Y+P+SP YSP+SP S TSP YSPSSP +P
Sbjct: 1747 YSPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPG 1806
Query: 404 -STGYSPSQPGYSPSSTS------QYTPKTN 333
ST YSP+ P YSP+S S QY+P ++
Sbjct: 1807 ASTRYSPTSPKYSPTSLSYSPASPQYSPSSS 1837
Score = 102 bits (254), Expect = 2e-20
Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
FSP+SP +SP YSP SPSYSP SP YSP+SP+YSP+SP + SP Y+P+SPQ+SP S
Sbjct: 1727 FSPTSPSLYSSPRYSPASPSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTS 1786
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSPSS S +TP
Sbjct: 1787 PTYSPTSPSYSPSSPS-HTP 1805
Score = 99.0 bits (245), Expect = 2e-19
Identities = 54/99 (54%), Positives = 67/99 (67%), Gaps = 8/99 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
+SPSSP Y+P SPS+SPTSPS YSP SPSYSP SP YSP+SP S TSP Y+ S
Sbjct: 1713 YSPSSPNYTPASPSFSPTSPSLYSSPRYSPASPSYSPGSPKYSPTSPSYSPTSPSYASVS 1772
Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
PQ++P S YSP+ P YSP+S S Y+P + + T+
Sbjct: 1773 PQYTPTSPQYSPTSPTYSPTSPS-YSPSSPSHTPGASTR 1810
Score = 98.2 bits (243), Expect = 4e-19
Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YSP+SP+++PTSPS +PTS +YSP+SP+YSPSSP S SP YSP+SP +SP S Y
Sbjct: 1563 SPSYSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSY 1622
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1623 SPTSPSYSPTSPS-YSP 1638
Score = 98.2 bits (243), Expect = 4e-19
Identities = 51/84 (60%), Positives = 58/84 (69%), Gaps = 11/84 (13%)
Frame = -2
Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
+SPSSP YSPTSP YSPTS SYSP SP YSPSS YSP+SP + TSPDYS
Sbjct: 1796 YSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSA 1855
Query: 425 SSPQFSPS--TGYSPSQPGYSPSS 360
SSP +SP+ YSP+ P YSP+S
Sbjct: 1856 SSPTYSPTGPPSYSPTSPTYSPTS 1879
Score = 96.7 bits (239), Expect = 1e-18
Identities = 56/101 (55%), Positives = 69/101 (68%), Gaps = 17/101 (16%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYS-------PTSPSYSPTSPSYSPSSPTYSPSSPYN--------S 450
++SP+SP YSPTSPSY+ PTSP YSPTSP+YSP+SP+YSPSSP + S
Sbjct: 1753 KYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYS 1812
Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTND 330
TSP YSP+S +SP S YSPS YSP+S + YTP + D
Sbjct: 1813 PTSPKYSPTSLSYSPASPQYSPSSSKYSPTSPT-YTPTSPD 1852
Score = 96.7 bits (239), Expect = 1e-18
Identities = 54/110 (49%), Positives = 65/110 (59%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPT--------YSPSSPYNSG 447
+SP+SP Y+PTSP YSPTSP+YSPTSPSYSPSSP+ YSP+SP S
Sbjct: 1761 YSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSP 1820
Query: 446 TSPDYSPSSPQFSPSTG---------------YSPSQPGYSPSSTSQYTP 342
TS YSP+SPQ+SPS+ YS S P YSP+ Y+P
Sbjct: 1821 TSLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSP 1870
Score = 80.1 bits (196), Expect = 1e-13
Identities = 38/58 (65%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGTSPDYSPSSPQF 411
+SP+SP YSP+S YSPTSP+Y+PTSP YS SSPTYSP+ P + S TSP YSP+SP++
Sbjct: 1825 YSPASPQYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPTYSPTSPEY 1882
Score = 68.9 bits (167), Expect = 3e-10
Identities = 33/52 (63%), Positives = 43/52 (82%), Gaps = 2/52 (3%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-TYSPSSPYNSGTSPDY 432
++SPSS YSPTSP+Y+PTSP YS +SP+YSP+ P +YSP+SP S TSP+Y
Sbjct: 1831 QYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPTYSPTSPEY 1882
Score = 65.9 bits (159), Expect = 2e-09
Identities = 45/92 (48%), Positives = 53/92 (57%), Gaps = 11/92 (11%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSY-SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
FSPS S S SP YSP SP SP+SP PS+ Y PS G SP YSPSSP F+
Sbjct: 1519 FSPSGSSDASGLSPGYSPWSPQPGSPSSPG--PSNSPYVPSP--GGGMSPSYSPSSPAFA 1574
Query: 407 P--------STGYSPSQPGYSPSSTSQYTPKT 336
P S+ YSP+ P YSPSS + Y+P +
Sbjct: 1575 PTSPSMTPTSSNYSPTSPSYSPSSPN-YSPNS 1605
[66][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma floridae
RepID=UPI000186501C
Length = 1956
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 70/81 (86%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP++SP
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1759 SPSYSPTSPSYSPASPS-YSP 1778
Score = 116 bits (290), Expect = 1e-24
Identities = 57/83 (68%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP + TSP YSP+SP +SP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPT 1765
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP+S S Y+P +
Sbjct: 1766 SPSYSPASPSYSPTSPS-YSPSS 1787
Score = 115 bits (288), Expect = 2e-24
Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPT 1779
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSPS P YSP S S Y+P +
Sbjct: 1780 SPSYSPSSPNYSPQSPS-YSPSS 1801
Score = 115 bits (287), Expect = 3e-24
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y+P+S +Y+P
Sbjct: 1738 SPSYSPTSPNYTPTS-PKYSP 1757
Score = 114 bits (285), Expect = 5e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSP SP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1615 YSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694
Score = 114 bits (285), Expect = 5e-24
Identities = 59/89 (66%), Positives = 68/89 (76%), Gaps = 9/89 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTSPSYSPTSP+ YSPTSPSYSP+SP+YSP+SP S TSP YSPS
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPS 1786
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPK 339
SP +SP S YSPS P YSPSS + +PK
Sbjct: 1787 SPNYSPQSPSYSPSSPSYSPSSPNPSSPK 1815
Score = 111 bits (278), Expect = 4e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+P SP YSPTSPSYSPTSPSYSP SP+YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1609 TPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 110 bits (276), Expect = 6e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 7/88 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
++P+SP YSPTSPSYSPTSPSYSP SPSYSP+SP+YSPSSP S SP YSPSSP +SPS
Sbjct: 1748 YTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPSSPSYSPS 1807
Query: 401 T------GYSPSQPGYSPSSTSQYTPKT 336
+ Y+P+ P YSPSS +Y+P +
Sbjct: 1808 SPNPSSPKYTPTSPKYSPSS-PKYSPSS 1834
Score = 105 bits (262), Expect = 3e-21
Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 7/86 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPS-----YSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SPSSP YSP SPSYSP+SPSYSP+SP+ Y+P+SP YSPSSP S +SP YSP+SP
Sbjct: 1783 YSPSSPNYSPQSPSYSPSSPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSP 1842
Query: 416 QFSPSTG-YSPSQPGYSPSSTSQYTP 342
+SPS+ YSP+ P YSP ST +YTP
Sbjct: 1843 TYSPSSAKYSPASPSYSP-STPKYTP 1867
Score = 103 bits (258), Expect = 7e-21
Identities = 51/85 (60%), Positives = 65/85 (76%), Gaps = 4/85 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSS YSP SPSYSP++P Y+PTSP YSP+SPTY+P+SP S TSP Y+P +P++SP
Sbjct: 1844 YSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPT 1903
Query: 404 STGYSPSQPGYSPSST--SQYTPKT 336
S YSP+ P YSP+S S Y+P T
Sbjct: 1904 SPKYSPTSPTYSPTSPKGSTYSPTT 1928
Score = 103 bits (256), Expect = 1e-20
Identities = 49/87 (56%), Positives = 69/87 (79%), Gaps = 1/87 (1%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP SP+Y+PTSP YSPTSPSY+P +P YSP+SP S TSP YSP+SP+ S
Sbjct: 1864 KYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGST 1923
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNK 324
YSP+ PGYSP+S + Y+P++ +++
Sbjct: 1924 ---YSPTTPGYSPASPT-YSPESPESR 1946
Score = 102 bits (254), Expect = 2e-20
Identities = 53/95 (55%), Positives = 65/95 (68%), Gaps = 14/95 (14%)
Frame = -2
Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SPSSP Y+PTSP YSP+SP YSP+SP YSP+SPTYSPSS S SP YSPS+P
Sbjct: 1804 YSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTP 1863
Query: 416 QFSP--------STGYSPSQPGYSPSSTSQYTPKT 336
+++P S Y+P+ P YSP+S S YTP T
Sbjct: 1864 KYTPTSPKYSPASPTYTPTSPKYSPTSPS-YTPDT 1897
Score = 96.3 bits (238), Expect = 2e-18
Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 453
P+SPY P+ SPSYSP SP+ YSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PASPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNY 1636
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 95.5 bits (236), Expect = 3e-18
Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 7/86 (8%)
Frame = -2
Query: 578 FSPSSPY---S---PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SPSSP S P+SP Y+PTSP YSP+SP YSPSSP YSP+SP S +S YSP+SP
Sbjct: 1797 YSPSSPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASP 1856
Query: 416 QFSPST-GYSPSQPGYSPSSTSQYTP 342
+SPST Y+P+ P YSP+S + YTP
Sbjct: 1857 SYSPSTPKYTPTSPKYSPASPT-YTP 1881
Score = 89.4 bits (220), Expect = 2e-16
Identities = 47/89 (52%), Positives = 65/89 (73%), Gaps = 9/89 (10%)
Frame = -2
Query: 581 RFSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
+++P+SP YSP+S P YSPTSP+YSP+S YSP+SP+YSPS+P + TSP YSP
Sbjct: 1815 KYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSP 1874
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP ++P S YSP+ P Y+P T +Y+P
Sbjct: 1875 ASPTYTPTSPKYSPTSPSYTP-DTPKYSP 1902
Score = 70.9 bits (172), Expect = 7e-11
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 4/58 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSP---SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
++SP+SP YSPTSP+YSPTSP +YSPT+P YSP+SPTYSP SP + T + S
Sbjct: 1899 KYSPTSPKYSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSPESPESRATQEEEEDES 1956
Score = 58.2 bits (139), Expect = 5e-07
Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQF 411
FSPS+ + S + SP++SPT S P SP P+SPY SP YSP+SP +
Sbjct: 1545 FSPSAASDASGMSPAGYSPAWSPTPGS--PGSP--GPASPYIPSPGGPMSPSYSPASPAY 1600
Query: 410 SP---------STGYSPSQPGYSPSSTSQYTP 342
P S GYSP+ P YSP+S S Y+P
Sbjct: 1601 MPRSPGGMTPQSPGYSPTSPSYSPTSPS-YSP 1631
[67][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179348F
Length = 1862
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1709 SPSYSPTSPSYSPTSPS-YSP 1728
Score = 116 bits (290), Expect = 1e-24
Identities = 59/81 (72%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSPS P Y+ SS S YTP
Sbjct: 1730 SPSYSPSSPQYAASSPS-YTP 1749
Score = 111 bits (277), Expect = 5e-23
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 7/86 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYS-----PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SP+SP YSPTSPSYS PTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP
Sbjct: 1630 YSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1690 SYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 106 bits (265), Expect = 1e-21
Identities = 59/117 (50%), Positives = 73/117 (62%), Gaps = 28/117 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSPQ++ S
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAAS 1743
Query: 401 TG---------------------------YSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
+ YSP+ P YSPS+ S Y+P + + + G
Sbjct: 1744 SPSYTPSATSGTSNYKYSPTSPSLAVSPTYSPTSPMYSPSNAS-YSPSSLQHTPNAG 1799
Score = 102 bits (254), Expect = 2e-20
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
SP+ YSPTSPSYSPTSPSYS TS YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1625 SPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700
Score = 86.3 bits (212), Expect = 2e-15
Identities = 49/101 (48%), Positives = 60/101 (59%), Gaps = 21/101 (20%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSS-------------PTYSPSSPYNSGT- 444
++SP+SP SP+YSPTSP YSP++ SYSPSS +YSPSSP S T
Sbjct: 1759 KYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTN 1818
Query: 443 ----SPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTP 342
SP YSP+SP +SP G YSPS P YSP+S + P
Sbjct: 1819 FSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSGP 1859
Score = 82.4 bits (202), Expect = 2e-14
Identities = 52/115 (45%), Positives = 64/115 (55%), Gaps = 35/115 (30%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSP---------------------------TSPSYSPSS 483
+SP+SP YSPTSPSYSPTSPSYSP TSPS + S
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTPSATSGTSNYKYSPTSPSLA-VS 1770
Query: 482 PTYSPSSPYNSGTSPDYSPSSPQFSPSTG-------YSPSQPGYSPSSTSQYTPK 339
PTYSP+SP S ++ YSPSS Q +P+ G YSPS P YSP++ S +P+
Sbjct: 1771 PTYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTNFSMASPR 1825
Score = 63.9 bits (154), Expect = 9e-09
Identities = 38/58 (65%), Positives = 42/58 (72%), Gaps = 8/58 (13%)
Frame = -2
Query: 578 FSPSSP-YSPT-----SPSYSPTSPSYSP--TSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SPSSP YSPT SP YSPTSP+YSP SP YSPSSP+YSP+SP SG PD S
Sbjct: 1807 YSPSSPVYSPTNFSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSG--PDES 1862
Score = 58.5 bits (140), Expect = 4e-07
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Frame = -2
Query: 569 SSPYSPT----SPSYS-PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+SPY P+ SP+Y+ P+SP + SPS +P++ YSP+SP S T + +P SP
Sbjct: 1570 TSPYVPSPSSMSPNYNYPSSPQFGSLSPSMTPTN--YSPTSPQYSATQQN-TPKYSSMSP 1626
Query: 404 STGYSPSQPGYSPSSTS 354
+ YSP+ P YSP+S S
Sbjct: 1627 NYNYSPTSPSYSPTSPS 1643
[68][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179338A
Length = 1862
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1709 SPSYSPTSPSYSPTSPS-YSP 1728
Score = 116 bits (290), Expect = 1e-24
Identities = 59/81 (72%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSPS P Y+ SS S YTP
Sbjct: 1730 SPSYSPSSPQYTASSPS-YTP 1749
Score = 111 bits (277), Expect = 5e-23
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 7/86 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYS-----PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SP+SP YSPTSPSYS PTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP
Sbjct: 1630 YSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1690 SYSPTSPSYSPTSPSYSPTSPS-YSP 1714
Score = 104 bits (259), Expect = 6e-21
Identities = 56/110 (50%), Positives = 71/110 (64%), Gaps = 21/110 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP Y+ SSP ++PS
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSYTPS 1750
Query: 401 T--------------------GYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
YSP+ P YSPS+ S Y+P + + + G
Sbjct: 1751 ATSGASNYKYSPTSPSLAVSPTYSPTSPMYSPSNAS-YSPSSVQHTPNAG 1799
Score = 102 bits (254), Expect = 2e-20
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
SP+ YSPTSPSYSPTSPSYS TS YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1625 SPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700
Score = 86.7 bits (213), Expect = 1e-15
Identities = 49/102 (48%), Positives = 61/102 (59%), Gaps = 21/102 (20%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSS-------------PTYSPSSPYNSGT- 444
++SP+SP SP+YSPTSP YSP++ SYSPSS +YSPSSP S T
Sbjct: 1759 KYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSVQHTPNAGVTQYNQSYSPSSPVYSPTN 1818
Query: 443 ----SPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTPK 339
SP YSP+SP +SP G YSPS P YSP+S + P+
Sbjct: 1819 FSLASPRYSPTSPTYSPGVGSPNYSPSSPSYSPTSPNYSGPE 1860
Score = 82.0 bits (201), Expect = 3e-14
Identities = 52/115 (45%), Positives = 64/115 (55%), Gaps = 35/115 (30%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSP---------------------------TSPSYSPSS 483
+SP+SP YSPTSPSYSPTSPSYSP TSPS + S
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSYTPSATSGASNYKYSPTSPSLA-VS 1770
Query: 482 PTYSPSSPYNSGTSPDYSPSSPQFSPSTG-------YSPSQPGYSPSSTSQYTPK 339
PTYSP+SP S ++ YSPSS Q +P+ G YSPS P YSP++ S +P+
Sbjct: 1771 PTYSPTSPMYSPSNASYSPSSVQHTPNAGVTQYNQSYSPSSPVYSPTNFSLASPR 1825
Score = 64.7 bits (156), Expect = 5e-09
Identities = 35/56 (62%), Positives = 38/56 (67%), Gaps = 7/56 (12%)
Frame = -2
Query: 560 YSPTSPSYSPT-----SPSYSPTSPSYSPS--SPTYSPSSPYNSGTSPDYSPSSPQ 414
YSP+SP YSPT SP YSPTSP+YSP SP YSPSSP S TSP+YS Q
Sbjct: 1807 YSPSSPVYSPTNFSLASPRYSPTSPTYSPGVGSPNYSPSSPSYSPTSPNYSGPEEQ 1862
Score = 58.5 bits (140), Expect = 4e-07
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Frame = -2
Query: 569 SSPYSPT----SPSYS-PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+SPY P+ SP+Y+ P+SP + SPS +P++ YSP+SP S T + +P SP
Sbjct: 1570 TSPYVPSPNSMSPNYNYPSSPQFGSMSPSMTPTN--YSPTSPQYSATQQN-TPKYSSMSP 1626
Query: 404 STGYSPSQPGYSPSSTS 354
+ YSP+ P YSP+S S
Sbjct: 1627 NYNYSPTSPSYSPTSPS 1643
[69][TOP]
>UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B3
Length = 1018
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 833 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 892
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 893 SPSYSPTSPSYSPTSPS-YSP 912
Score = 113 bits (283), Expect = 9e-24
Identities = 54/74 (72%), Positives = 63/74 (85%), Gaps = 2/74 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 840 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 899
Query: 404 STGYSPSQPGYSPS 363
S YSP+ P YSP+
Sbjct: 900 SPSYSPTSPSYSPT 913
Score = 112 bits (281), Expect = 2e-23
Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 816 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 875
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 876 SPTSPSYSPTSPS-YSP 891
Score = 106 bits (264), Expect = 1e-21
Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S Y TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 809 SPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 868
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 869 SPTSPSYSPTSPS-YSP 884
Score = 102 bits (255), Expect = 2e-20
Identities = 49/71 (69%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+
Sbjct: 854 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 913
Query: 401 TGYSPSQPGYS 369
++ QP +S
Sbjct: 914 --FAKLQPNFS 922
Score = 98.6 bits (244), Expect = 3e-19
Identities = 51/88 (57%), Positives = 61/88 (69%), Gaps = 10/88 (11%)
Frame = -2
Query: 575 SPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
SP+SP Y SP Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+
Sbjct: 791 SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 850
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 851 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 877
Score = 88.2 bits (217), Expect = 4e-16
Identities = 47/79 (59%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = -2
Query: 572 PSSPYSPTSP-SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
P SP SPTSP +Y TSP+Y SP Y +SPTYSP+SP S TSP YSP+SP +SP S
Sbjct: 787 PGSP-SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 845
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 846 SYSPTSPSYSPTSPS-YSP 863
[70][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Pan troglodytes RepID=UPI0000E24648
Length = 1913
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 114 bits (286), Expect = 4e-24
Identities = 59/96 (61%), Positives = 70/96 (72%), Gaps = 15/96 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 404 -------------STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSPSS +YTP++
Sbjct: 1724 SQSYHPTVVDSSTSPSYSPTSPSYSPSS-PRYTPQS 1758
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1802 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1861
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1862 TSPKYSPTSPTYSPTSPKGSTYSP 1885
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1761 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1820
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1821 SPTYSPTTPKYSPTSPT-YSP 1840
Score = 108 bits (271), Expect = 2e-22
Identities = 59/101 (58%), Positives = 70/101 (69%), Gaps = 22/101 (21%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-------------YNSGTS 441
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP +S TS
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTS 1737
Query: 440 PDYSPSSPQFSPST--------GYSPSQPGYSPSSTSQYTP 342
P YSP+SP +SPS+ Y+PS P YSPSS S Y+P
Sbjct: 1738 PSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPS-YSP 1777
Score = 108 bits (270), Expect = 3e-22
Identities = 58/96 (60%), Positives = 69/96 (71%), Gaps = 8/96 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 404 STGYSPSQP---GYSPS---STSQYTPKTNDNKDDP 315
S YSP+ P SPS ++ Y P D+ P
Sbjct: 1703 SPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSP 1738
Score = 108 bits (270), Expect = 3e-22
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1753 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1812
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1813 TSPKYSPTSPTYSP-TTPKYSP 1833
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1789 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1848
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1849 SPKYSPTSPTYSPTS-PKYSP 1868
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1816 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1875
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1876 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1908
Score = 105 bits (262), Expect = 3e-21
Identities = 57/94 (60%), Positives = 66/94 (70%), Gaps = 15/94 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSP-------------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
+SP+SP YSPTSPSYSP TSPSYSPTSPSYSPSSP Y+P SP + +S
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPSYSPSSPRYTPQSPTYTPSS 1765
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSPSSP +SP S Y+P+ P YSPSS +YTP
Sbjct: 1766 PSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1798
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1781 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1840
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1841 TSPVYTPTSPKYSPTSPT-YSP 1861
Score = 102 bits (254), Expect = 2e-20
Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399
S S YSPTSPSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+SP +SPS+
Sbjct: 1735 STSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSP 1794
Query: 398 GYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S +Y+P
Sbjct: 1795 EYTPTSPKYSPTS-PKYSP 1812
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 100 bits (249), Expect = 8e-20
Identities = 53/94 (56%), Positives = 67/94 (71%), Gaps = 15/94 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
+SP+SP YSPTS PSYSPTSPSYSP+SP Y+P SPTY+PSSP S +S
Sbjct: 1713 YSPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1772
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SP+++P S YSPS P Y+P+S +Y+P
Sbjct: 1773 PSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 1805
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1830 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1889
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1890 YSPTSPTYSLTSPAISPDDSDE 1911
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624
[71][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2B
Length = 1892
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1614 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1674 SPSYSPTSPSYSPTSPS-YSP 1693
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1681 SPSYSPTSPSYSPTSPS-YSP 1700
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSP 1721
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1709 SPSYSPTSPSYSPTSPS-YSP 1728
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1723 SPSYSPTSPNYSPSRPN-YTP 1742
Score = 116 bits (291), Expect = 1e-24
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S + + N P
Sbjct: 1716 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1745
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1736
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S S Y+P
Sbjct: 1737 RPNYTPTSPSYSPTSPS-YSP 1756
Score = 115 bits (287), Expect = 3e-24
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1757
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1758 SPKYTPTSPSYSPSS-PEYTP 1777
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1593 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1781 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1840
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1841 TSPKYSPTSPTYSPTSPKGSTYSP 1864
Score = 109 bits (273), Expect = 1e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1740 YTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1799
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1800 SPTYSPTTPKYSPTSPT-YSP 1819
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1768 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1827
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1828 SPKYSPTSPTYSPTS-PKYSP 1847
Score = 107 bits (267), Expect = 7e-22
Identities = 51/81 (62%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1719 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1778
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1779 SPKYSPTSPKYSPTS-PKYSP 1798
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1795 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1854
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1855 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1887
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1760 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1819
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1820 TSPVYTPTSPKYSPTSPT-YSP 1840
Score = 99.8 bits (247), Expect = 1e-19
Identities = 54/94 (57%), Positives = 62/94 (65%), Gaps = 16/94 (17%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
SP SP SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP S TS
Sbjct: 1566 SPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1625
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1626 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 99.0 bits (245), Expect = 2e-19
Identities = 55/104 (52%), Positives = 63/104 (60%), Gaps = 26/104 (25%)
Frame = -2
Query: 575 SPSSPYS-------------------------PTSPSYSPTSPSYSPTSPSYSPSSPTYS 471
+P SP S P SPSYSPTSPSYSPTSPSYSP+SP YS
Sbjct: 1563 TPGSPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYS 1622
Query: 470 PSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P+SP S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1623 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665
Score = 98.2 bits (243), Expect = 4e-19
Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423
+SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP +YSPSSP + TSP YSP+
Sbjct: 1726 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPT 1785
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1786 SPKYSPTSPKYSPTSPTYSP-TTPKYSP 1812
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1809 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1868
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1869 YSPTSPTYSLTSPAISPDDSDE 1890
Score = 56.2 bits (134), Expect = 2e-06
Identities = 41/92 (44%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPT-----------SPSYSPSSPTYSPSSPYNSGTSP 438
FSPS S S SP YSP ++SPT SPSYSP+SP Y P SP
Sbjct: 1541 FSPSAASDASGFSPGYSP---AWSPTPGSPGSPGGAMSPSYSPTSPAYEPRSPGG----- 1592
Query: 437 DYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
Y+P SP YSP+ P YSP+S S Y+P
Sbjct: 1593 -YTPQSPS------YSPTSPSYSPTSPS-YSP 1616
[72][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2A
Length = 1896
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1618 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1677
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1678 SPSYSPTSPSYSPTSPS-YSP 1697
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1685 SPSYSPTSPSYSPTSPS-YSP 1704
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1706 SPSYSPTSPSYSPTSPS-YSP 1725
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1653 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1712
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1713 SPSYSPTSPSYSPTSPS-YSP 1732
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1726
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1727 SPSYSPTSPNYSPSRPN-YTP 1746
Score = 116 bits (291), Expect = 1e-24
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1719
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S + + N P
Sbjct: 1720 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1749
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1681 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1740
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S S Y+P
Sbjct: 1741 RPNYTPTSPSYSPTSPS-YSP 1760
Score = 115 bits (287), Expect = 3e-24
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP
Sbjct: 1702 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1761
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1762 SPKYTPTSPSYSPSS-PEYTP 1781
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1597 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1657 SPSYSPTSPSYSPTSPS-YSP 1676
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1785 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1844
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1845 TSPKYSPTSPTYSPTSPKGSTYSP 1868
Score = 109 bits (273), Expect = 1e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1744 YTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1803
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1804 SPTYSPTTPKYSPTSPT-YSP 1823
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1772 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1831
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1832 SPKYSPTSPTYSPTS-PKYSP 1851
Score = 107 bits (267), Expect = 7e-22
Identities = 51/81 (62%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1723 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1782
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1783 SPKYSPTSPKYSPTS-PKYSP 1802
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1799 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1858
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1859 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1891
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1764 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1823
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1824 TSPVYTPTSPKYSPTSPT-YSP 1844
Score = 99.8 bits (247), Expect = 1e-19
Identities = 54/94 (57%), Positives = 62/94 (65%), Gaps = 16/94 (17%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
SP SP SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP S TS
Sbjct: 1570 SPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1629
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1630 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1662
Score = 99.0 bits (245), Expect = 2e-19
Identities = 55/104 (52%), Positives = 63/104 (60%), Gaps = 26/104 (25%)
Frame = -2
Query: 575 SPSSPYS-------------------------PTSPSYSPTSPSYSPTSPSYSPSSPTYS 471
+P SP S P SPSYSPTSPSYSPTSPSYSP+SP YS
Sbjct: 1567 TPGSPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYS 1626
Query: 470 PSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P+SP S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1627 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1669
Score = 98.2 bits (243), Expect = 4e-19
Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423
+SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP +YSPSSP + TSP YSP+
Sbjct: 1730 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPT 1789
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1790 SPKYSPTSPKYSPTSPTYSP-TTPKYSP 1816
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1813 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1872
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1873 YSPTSPTYSLTSPAISPDDSDE 1894
Score = 58.2 bits (139), Expect = 5e-07
Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 12/91 (13%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPS-YSPTSPSYSPS-SPTY-SPSSPYNSGTSPDYSPSSPQFS 408
+SP S +P + +SP++ S S SP YSP+ SPT SP SP SP YSP+SP +
Sbjct: 1532 WSPRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSP-GGAMSPSYSPTSPAYE 1590
Query: 407 P---------STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S S Y+P
Sbjct: 1591 PRSPGGYTPQSPSYSPTSPSYSPTSPS-YSP 1620
[73][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B29
Length = 1891
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1597 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1657 SPSYSPTSPSYSPTSPS-YSP 1676
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1604 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1664 SPSYSPTSPSYSPTSPS-YSP 1683
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1685 SPSYSPTSPSYSPTSPS-YSP 1704
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1706 SPSYSPTSPNYSPSRPN-YTP 1725
Score = 116 bits (291), Expect = 1e-24
Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1719
Query: 401 -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315
Y+P+ P YSP+S S YTP + + P
Sbjct: 1720 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1755
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1576 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1635
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1636 SPSYSPTSPSYSPTSPS-YSP 1655
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1780 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1839
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1840 TSPKYSPTSPTYSPTSPKGSTYSP 1863
Score = 109 bits (272), Expect = 2e-22
Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P
Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1747
Query: 404 ---------STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1748 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1776
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1767 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1826
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1827 SPKYSPTSPTYSPTS-PKYSP 1846
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1794 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1853
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1854 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1886
Score = 103 bits (258), Expect = 7e-21
Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408
+SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++
Sbjct: 1716 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1775
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S +Y+P
Sbjct: 1776 PTSPKYSPTSPKYSPTS-PKYSP 1797
Score = 102 bits (253), Expect = 3e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S
Sbjct: 1754 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1813
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P Y+P+S +Y+P
Sbjct: 1814 PTYSPTSPVYTPTS-PKYSP 1832
Score = 101 bits (251), Expect = 5e-20
Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP Y+P SP+YSPT SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++S
Sbjct: 1737 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1796
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S + Y+P
Sbjct: 1797 PTSPTYSPTTPKYSPTSPT-YSP 1818
Score = 100 bits (250), Expect = 6e-20
Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399
SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T
Sbjct: 1748 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1807
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S YTP
Sbjct: 1808 KYSPTSPTYSPTS-PVYTP 1825
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1545 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1604
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1605 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1641
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1808 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1867
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1868 YSPTSPTYSLTSPAISPDDSDE 1889
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1514 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1566
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1567 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1592
[74][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B28
Length = 1908
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1614 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1674 SPSYSPTSPSYSPTSPS-YSP 1693
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1681 SPSYSPTSPSYSPTSPS-YSP 1700
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSP 1721
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1723 SPSYSPTSPNYSPSRPN-YTP 1742
Score = 116 bits (291), Expect = 1e-24
Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1736
Query: 401 -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315
Y+P+ P YSP+S S YTP + + P
Sbjct: 1737 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1772
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1593 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1797 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1856
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1857 TSPKYSPTSPTYSPTSPKGSTYSP 1880
Score = 109 bits (272), Expect = 2e-22
Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1764
Query: 404 ---------STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1765 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1793
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1784 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1843
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1844 SPKYSPTSPTYSPTS-PKYSP 1863
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1811 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1870
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1871 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1903
Score = 103 bits (258), Expect = 7e-21
Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408
+SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++
Sbjct: 1733 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1792
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S +Y+P
Sbjct: 1793 PTSPKYSPTSPKYSPTS-PKYSP 1814
Score = 102 bits (253), Expect = 3e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S
Sbjct: 1771 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1830
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P Y+P+S +Y+P
Sbjct: 1831 PTYSPTSPVYTPTS-PKYSP 1849
Score = 101 bits (251), Expect = 5e-20
Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP Y+P SP+YSPT SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++S
Sbjct: 1754 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1813
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S + Y+P
Sbjct: 1814 PTSPTYSPTTPKYSPTSPT-YSP 1835
Score = 100 bits (250), Expect = 6e-20
Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399
SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T
Sbjct: 1765 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1824
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S YTP
Sbjct: 1825 KYSPTSPTYSPTS-PVYTP 1842
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1562 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1621
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1622 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1658
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1825 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1884
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1885 YSPTSPTYSLTSPAISPDDSDE 1906
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1531 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1583
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1584 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1609
[75][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 18 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B27
Length = 1831
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1547 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1606
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1607 SPSYSPTSPSYSPTSPS-YSP 1626
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1554 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1613
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1614 SPSYSPTSPSYSPTSPS-YSP 1633
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1575 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1634
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1635 SPSYSPTSPSYSPTSPS-YSP 1654
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1596 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1655
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1656 SPSYSPTSPNYSPSRPN-YTP 1675
Score = 116 bits (291), Expect = 1e-24
Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1610 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1669
Query: 401 -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315
Y+P+ P YSP+S S YTP + + P
Sbjct: 1670 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1705
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1526 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1585
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1586 SPSYSPTSPSYSPTSPS-YSP 1605
Score = 110 bits (275), Expect = 8e-23
Identities = 50/80 (62%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSP+YSP+ P+Y+P+SP+YSP+SP S TSP+Y+P SP +SP+
Sbjct: 1645 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1704
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSPS P Y+P+S +Y+P
Sbjct: 1705 PSYSPSSPEYTPTS-PKYSP 1723
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1720 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1779
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1780 TSPKYSPTSPTYSPTSPKGSTYSP 1803
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1734 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1793
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1794 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1826
Score = 103 bits (258), Expect = 7e-21
Identities = 52/83 (62%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+ Y S +SP+Y+P+SP++SP
Sbjct: 1666 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSY-SPSSPEYTPTSPKYSPT 1724
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP+S + Y+P T
Sbjct: 1725 SPKYSPTSPKYSPTSPT-YSPTT 1746
Score = 102 bits (255), Expect = 2e-20
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+SP+ YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S
Sbjct: 1701 YSPTPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1760
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S + Y+P
Sbjct: 1761 PVYTPTSPKYSPTSPT-YSP 1779
Score = 100 bits (248), Expect = 1e-19
Identities = 50/87 (57%), Positives = 67/87 (77%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGTSPDYSPSS 420
+SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP N +P YSPSS
Sbjct: 1652 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSS 1711
Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTP 342
P+++P S YSP+ P YSP+S +Y+P
Sbjct: 1712 PEYTPTSPKYSPTSPKYSPTS-PKYSP 1737
Score = 97.4 bits (241), Expect = 7e-19
Identities = 49/81 (60%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPT PSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP
Sbjct: 1694 YTPMSPNYSPT-PSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1752
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y+P+S +Y+P
Sbjct: 1753 SPTYSPTSPVYTPTS-PKYSP 1772
Score = 94.4 bits (233), Expect = 6e-18
Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 16/94 (17%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
+P + SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP S TS
Sbjct: 1499 TPGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1558
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1559 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1591
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1748 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1807
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1808 YSPTSPTYSLTSPAISPDDSDE 1829
Score = 92.0 bits (227), Expect = 3e-17
Identities = 53/88 (60%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS P+YSPT PSYSP+SP Y+P+SP YSP+SP S TSP YSP+
Sbjct: 1680 YSPTSPSYSPTSPNYTPMSPNYSPT-PSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1738
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SP+T YSP+ P YSP+S YTP
Sbjct: 1739 SPTYSPTTPKYSPTSPTYSPTS-PVYTP 1765
[76][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 17 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B26
Length = 1684
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1524 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1583
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1584 SPSYSPTSPSYSPTSPS-YSP 1603
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1531 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1590
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1591 SPSYSPTSPSYSPTSPS-YSP 1610
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1612 SPSYSPTSPSYSPTSPS-YSP 1631
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1559 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1619 SPSYSPTSPSYSPTSPS-YSP 1638
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1633 SPSYSPTSPNYSPSRPN-YTP 1652
Score = 116 bits (291), Expect = 1e-24
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S + + N P
Sbjct: 1626 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1655
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1646
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S S Y+P
Sbjct: 1647 RPNYTPTSPSYSPTSPS-YSP 1666
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1653
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1654 SPSYSPTSPSYSPTSPN-YTP 1673
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1503 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1562
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1563 SPSYSPTSPSYSPTSPS-YSP 1582
Score = 110 bits (276), Expect = 6e-23
Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSS 360
S Y+P P YSP+S
Sbjct: 1668 SPNYTPMSPNYSPTS 1682
Score = 92.8 bits (229), Expect = 2e-17
Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 9/79 (11%)
Frame = -2
Query: 551 TSPSYS--------PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
TSP+Y P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1491 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1550
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1551 SYSPTSPSYSPTSPS-YSP 1568
Score = 84.3 bits (207), Expect = 6e-15
Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP
Sbjct: 1629 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1683
Score = 75.1 bits (183), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
+SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+
Sbjct: 1636 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1684
[77][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 16 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B25
Length = 1752
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1524 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1583
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1584 SPSYSPTSPSYSPTSPS-YSP 1603
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1531 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1590
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1591 SPSYSPTSPSYSPTSPS-YSP 1610
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1612 SPSYSPTSPSYSPTSPS-YSP 1631
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1633 SPSYSPTSPNYSPSRPN-YTP 1652
Score = 116 bits (291), Expect = 1e-24
Identities = 58/92 (63%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1646
Query: 401 -TGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
Y+P+ P YSP+S S Y+P + + P +
Sbjct: 1647 RPNYTPTSPSYSPTSPS-YSPTSPNYTYSPSS 1677
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1503 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1562
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1563 SPSYSPTSPSYSPTSPS-YSP 1582
Score = 113 bits (283), Expect = 9e-24
Identities = 56/84 (66%), Positives = 68/84 (80%), Gaps = 5/84 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP+
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1667
Query: 401 T---GYSPSQPGYSPSSTS-QYTP 342
+ YSPS P YSP+S + +Y+P
Sbjct: 1668 SPNYTYSPSSPSYSPTSPNPKYSP 1691
Score = 97.4 bits (241), Expect = 7e-19
Identities = 56/89 (62%), Positives = 68/89 (76%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPD--YSPSSPQ 414
+SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP TYSPSSP S TSP+ YSP+SP
Sbjct: 1636 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPN 1695
Query: 413 --FSP-STGYSPSQPGYSPSST--SQYTP 342
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1696 PTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1724
Score = 96.7 bits (239), Expect = 1e-18
Identities = 50/87 (57%), Positives = 66/87 (75%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP--YNSGTSPDYSPSSPQ-- 414
+SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP S +SP YSP+SP
Sbjct: 1629 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPK 1688
Query: 413 ---FSPSTGYSPSQPGYSPSSTSQYTP 342
SP+ YSP+ P YSP+S + Y+P
Sbjct: 1689 YSPTSPNPTYSPTSPKYSPTSPT-YSP 1714
Score = 94.7 bits (234), Expect = 5e-18
Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 14/101 (13%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY--SPTSPSYSPSSP-----------TYSPSSPYNSGTS 441
++P+SP YSPTSPSYSPTSP+Y SP+SPSYSP+SP TYSP+SP S TS
Sbjct: 1650 YTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTSPKYSPTS 1709
Query: 440 PDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
P YSP+SP+ S YSP+ PGYSP+S + + DD
Sbjct: 1710 PTYSPTSPKGST---YSPTSPGYSPTSPTYSLTSPAISPDD 1747
Score = 92.8 bits (229), Expect = 2e-17
Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 9/79 (11%)
Frame = -2
Query: 551 TSPSYS--------PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
TSP+Y P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1491 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1550
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1551 SYSPTSPSYSPTSPS-YSP 1568
Score = 84.7 bits (208), Expect = 5e-15
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 11/87 (12%)
Frame = -2
Query: 578 FSPSSP---YSPTSPSYSPTSPS--YSPTSPS--YSPSSPTYSPSSPYNSGTSP---DYS 429
+SP+SP YSP+SPSYSPTSP+ YSPTSP+ YSP+SP YSP+SP S TSP YS
Sbjct: 1664 YSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTSPKYSPTSPTYSPTSPKGSTYS 1723
Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQ 351
P+SP +SP S YS + P SP + +
Sbjct: 1724 PTSPGYSPTSPTYSLTSPAISPDDSDE 1750
Score = 74.3 bits (181), Expect = 6e-12
Identities = 38/62 (61%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSP---TYSPSSPYNSGTSPDYSPSSPQF 411
++SP+SP P+YSPTSP YSPTSP+YSP+SP TYSP+SP S TSP YS +SP
Sbjct: 1688 KYSPTSPN----PTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1743
Query: 410 SP 405
SP
Sbjct: 1744 SP 1745
[78][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B24
Length = 1924
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1630 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1689
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1690 SPSYSPTSPSYSPTSPS-YSP 1709
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1637 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1696
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1697 SPSYSPTSPSYSPTSPS-YSP 1716
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1658 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1717
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1718 SPSYSPTSPSYSPTSPS-YSP 1737
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1679 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1738
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1739 SPSYSPTSPNYSPSRPN-YTP 1758
Score = 116 bits (291), Expect = 1e-24
Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1693 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1752
Query: 401 -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315
Y+P+ P YSP+S S YTP + + P
Sbjct: 1753 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1788
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1609 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1668
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1669 SPSYSPTSPSYSPTSPS-YSP 1688
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1813 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1872
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1873 TSPKYSPTSPTYSPTSPKGSTYSP 1896
Score = 109 bits (272), Expect = 2e-22
Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P
Sbjct: 1721 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1780
Query: 404 ---------STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1781 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1809
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1800 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1859
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1860 SPKYSPTSPTYSPTS-PKYSP 1879
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1827 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1886
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1887 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1919
Score = 103 bits (258), Expect = 7e-21
Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408
+SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++
Sbjct: 1749 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1808
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S +Y+P
Sbjct: 1809 PTSPKYSPTSPKYSPTS-PKYSP 1830
Score = 102 bits (253), Expect = 3e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S
Sbjct: 1787 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1846
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P Y+P+S +Y+P
Sbjct: 1847 PTYSPTSPVYTPTS-PKYSP 1865
Score = 101 bits (251), Expect = 5e-20
Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP Y+P SP+YSPT SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++S
Sbjct: 1770 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1829
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S + Y+P
Sbjct: 1830 PTSPTYSPTTPKYSPTSPT-YSP 1851
Score = 100 bits (250), Expect = 6e-20
Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399
SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T
Sbjct: 1781 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1840
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S YTP
Sbjct: 1841 KYSPTSPTYSPTS-PVYTP 1858
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1578 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1637
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1638 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1674
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1841 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1900
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1901 YSPTSPTYSLTSPAISPDDSDE 1922
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1547 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1599
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1600 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1625
[79][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 14 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B23
Length = 1653
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1493 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1552
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1553 SPSYSPTSPSYSPTSPS-YSP 1572
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1500 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1559
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1560 SPSYSPTSPSYSPTSPS-YSP 1579
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1521 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1580
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1581 SPSYSPTSPSYSPTSPS-YSP 1600
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1528 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1587
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1588 SPSYSPTSPSYSPTSPS-YSP 1607
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1542 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1602 SPSYSPTSPNYSPSRPN-YTP 1621
Score = 116 bits (291), Expect = 1e-24
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1535 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S + + N P
Sbjct: 1595 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1624
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1615
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S S Y+P
Sbjct: 1616 RPNYTPTSPSYSPTSPS-YSP 1635
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P
Sbjct: 1563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1622
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1623 SPSYSPTSPSYSPTSPN-YTP 1642
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1472 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1531
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1532 SPSYSPTSPSYSPTSPS-YSP 1551
Score = 110 bits (276), Expect = 6e-23
Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1636
Query: 404 STGYSPSQPGYSPSS 360
S Y+P P YSP+S
Sbjct: 1637 SPNYTPMSPNYSPTS 1651
Score = 102 bits (254), Expect = 2e-20
Identities = 55/92 (59%), Positives = 62/92 (67%), Gaps = 16/92 (17%)
Frame = -2
Query: 569 SSPYSPTS---------------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
S YSPTS PSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP
Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1513
Query: 434 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1544
Score = 84.3 bits (207), Expect = 6e-15
Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP
Sbjct: 1598 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1652
Score = 75.1 bits (183), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
+SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+
Sbjct: 1605 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1653
[80][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B21
Length = 1922
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1716 SPSYSPTSPSYSPTSPS-YSP 1735
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1737 SPSYSPTSPNYSPSRPN-YTP 1756
Score = 116 bits (291), Expect = 1e-24
Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1750
Query: 401 -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315
Y+P+ P YSP+S S YTP + + P
Sbjct: 1751 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1786
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1811 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1870
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1871 TSPKYSPTSPTYSPTSPKGSTYSP 1894
Score = 109 bits (272), Expect = 2e-22
Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P
Sbjct: 1719 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1778
Query: 404 ---------STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1779 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1807
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1798 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1857
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1858 SPKYSPTSPTYSPTS-PKYSP 1877
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1825 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1884
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1885 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1917
Score = 103 bits (258), Expect = 7e-21
Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408
+SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++
Sbjct: 1747 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1806
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S +Y+P
Sbjct: 1807 PTSPKYSPTSPKYSPTS-PKYSP 1828
Score = 102 bits (253), Expect = 3e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S
Sbjct: 1785 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1844
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P Y+P+S +Y+P
Sbjct: 1845 PTYSPTSPVYTPTS-PKYSP 1863
Score = 101 bits (251), Expect = 5e-20
Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP Y+P SP+YSPT SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++S
Sbjct: 1768 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1827
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S + Y+P
Sbjct: 1828 PTSPTYSPTTPKYSPTSPT-YSP 1849
Score = 100 bits (250), Expect = 6e-20
Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399
SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T
Sbjct: 1779 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1838
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S YTP
Sbjct: 1839 KYSPTSPTYSPTS-PVYTP 1856
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1839 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1898
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1899 YSPTSPTYSLTSPAISPDDSDE 1920
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1545 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1597
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1598 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1623
[81][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B20
Length = 1923
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1738 SPSYSPTSPNYSPSRPN-YTP 1757
Score = 116 bits (291), Expect = 1e-24
Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1751
Query: 401 -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315
Y+P+ P YSP+S S YTP + + P
Sbjct: 1752 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1787
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1812 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1871
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1872 TSPKYSPTSPTYSPTSPKGSTYSP 1895
Score = 109 bits (272), Expect = 2e-22
Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1779
Query: 404 ---------STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1780 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1808
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1799 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1858
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1859 SPKYSPTSPTYSPTS-PKYSP 1878
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1826 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1885
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1886 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1918
Score = 103 bits (258), Expect = 7e-21
Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408
+SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++
Sbjct: 1748 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1807
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S +Y+P
Sbjct: 1808 PTSPKYSPTSPKYSPTS-PKYSP 1829
Score = 102 bits (253), Expect = 3e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S
Sbjct: 1786 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1845
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P Y+P+S +Y+P
Sbjct: 1846 PTYSPTSPVYTPTS-PKYSP 1864
Score = 101 bits (251), Expect = 5e-20
Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP Y+P SP+YSPT SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++S
Sbjct: 1769 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1828
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S + Y+P
Sbjct: 1829 PTSPTYSPTTPKYSPTSPT-YSP 1850
Score = 100 bits (250), Expect = 6e-20
Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399
SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T
Sbjct: 1780 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1839
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S YTP
Sbjct: 1840 KYSPTSPTYSPTS-PVYTP 1857
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1840 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1899
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1900 YSPTSPTYSLTSPAISPDDSDE 1921
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624
[82][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 10 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1F
Length = 1840
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1562 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1621
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1622 SPSYSPTSPSYSPTSPS-YSP 1641
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1569 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1628
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1629 SPSYSPTSPSYSPTSPS-YSP 1648
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1590 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1649
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1650 SPSYSPTSPSYSPTSPS-YSP 1669
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1597 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1657 SPSYSPTSPSYSPTSPS-YSP 1676
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1611 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1670
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1671 SPSYSPTSPNYSPSRPN-YTP 1690
Score = 116 bits (291), Expect = 1e-24
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1604 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S + + N P
Sbjct: 1664 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1693
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1684
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S S Y+P
Sbjct: 1685 RPNYTPTSPSYSPTSPS-YSP 1704
Score = 115 bits (287), Expect = 3e-24
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1705
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1706 SPKYTPTSPSYSPSS-PEYTP 1725
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1541 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1600
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1601 SPSYSPTSPSYSPTSPS-YSP 1620
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1729 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1788
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1789 TSPKYSPTSPTYSPTSPKGSTYSP 1812
Score = 109 bits (273), Expect = 1e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1688 YTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1747
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1748 SPTYSPTTPKYSPTSPT-YSP 1767
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1716 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1775
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1776 SPKYSPTSPTYSPTS-PKYSP 1795
Score = 107 bits (267), Expect = 7e-22
Identities = 51/81 (62%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1667 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1726
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1727 SPKYSPTSPKYSPTS-PKYSP 1746
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1743 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1802
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1803 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1835
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1708 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1767
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1768 TSPVYTPTSPKYSPTSPT-YSP 1788
Score = 98.2 bits (243), Expect = 4e-19
Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423
+SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP +YSPSSP + TSP YSP+
Sbjct: 1674 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPT 1733
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP++SP S YSP+ P YSP +T +Y+P
Sbjct: 1734 SPKYSPTSPKYSPTSPTYSP-TTPKYSP 1760
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1757 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1816
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1817 YSPTSPTYSLTSPAISPDDSDE 1838
Score = 68.2 bits (165), Expect = 5e-10
Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSPYSPTSP-SYSPTSPSYSPTSPSYSPSSPT--------YSPSSPYNSGTSPDYSP 426
+SP+ +P SP S P+SP YSP+SP Y+P SP S TSP YSP
Sbjct: 1498 YSPAWSPTPGSPGSPGPSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSP 1557
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1558 TSPSYSPTSPNYSPTSPSYSPTSPS-YSP 1585
Score = 54.3 bits (129), Expect = 7e-06
Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = -2
Query: 548 SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPG 375
SP YSP ++SPT S P SP PSSPY YSP+SP + P + GY+P P
Sbjct: 1495 SPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPS 1547
Query: 374 YSPSSTSQYTP 342
YSP+S S Y+P
Sbjct: 1548 YSPTSPS-YSP 1557
[83][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 9 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1E
Length = 1851
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1566 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPSYSPTSPS-YSP 1652
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1661 SPSYSPTSPSYSPTSPS-YSP 1680
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1675 SPSYSPTSPNYSPSRPN-YTP 1694
Score = 116 bits (291), Expect = 1e-24
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S + + N P
Sbjct: 1668 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1697
Score = 116 bits (291), Expect = 1e-24
Identities = 57/83 (68%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1688
Query: 401 -TGYSPSQPGYSPSSTSQYTPKT 336
Y+P+ P YSP+S S Y+P +
Sbjct: 1689 RPNYTPTSPSYSPTSPS-YSPSS 1710
Score = 115 bits (287), Expect = 3e-24
Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSPSSP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1717 SPKYTPTSPSYSPSS-PEYTP 1736
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1545 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1605 SPSYSPTSPSYSPTSPS-YSP 1624
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1740 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1799
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1800 TSPKYSPTSPTYSPTSPKGSTYSP 1823
Score = 109 bits (273), Expect = 1e-22
Identities = 53/81 (65%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+ P+Y+PTSPSYSPTSPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1678 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1738 SPKYSPTSPKYSPTS-PKYSP 1757
Score = 109 bits (273), Expect = 1e-22
Identities = 53/81 (65%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1692 YTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1751
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1752 SPKYSPTSPTYSP-TTPKYSP 1771
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1727 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1786
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1787 SPKYSPTSPTYSPTS-PKYSP 1806
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1754 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1813
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1814 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1846
Score = 104 bits (259), Expect = 6e-21
Identities = 50/81 (61%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP
Sbjct: 1713 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1772
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y+P+S +Y+P
Sbjct: 1773 SPTYSPTSPVYTPTS-PKYSP 1792
Score = 103 bits (257), Expect = 1e-20
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSPTSPSYSPTSPSYSP+SP+YSP+SP S + P+Y+P+
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1695
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S YSPS P YSP+S +YTP
Sbjct: 1696 SPSYSPTSPSYSPSSPSYSPTS-PKYTP 1722
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1514 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1573
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1574 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1610
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1768 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1827
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1828 YSPTSPTYSLTSPAISPDDSDE 1849
Score = 60.1 bits (144), Expect = 1e-07
Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 23/92 (25%)
Frame = -2
Query: 548 SPSYSPTSPSYSPTSPS--YSPS-----SPTYSPS---------------SPYNSGTSPD 435
SP++SPT S PS Y PS SP+YSP+ SP S TSP
Sbjct: 1499 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1558
Query: 434 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1559 YSPTSPSYSPTSPNYSPTSPSYSPTSPS-YSP 1589
Score = 56.2 bits (134), Expect = 2e-06
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Frame = -2
Query: 548 SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSP 387
SP YSP ++SPT S P SP PSSPY SP YSP+SP + P + GY+P
Sbjct: 1495 SPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTP 1547
Query: 386 SQPGYSPSSTSQYTP 342
P YSP+S S Y+P
Sbjct: 1548 QSPSYSPTSPS-YSP 1561
[84][TOP]
>UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=2 Tax=Canis lupus familiaris
RepID=UPI00005A0B1D
Length = 1764
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1604 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1664 SPSYSPTSPSYSPTSPS-YSP 1683
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1611 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1670
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1671 SPSYSPTSPSYSPTSPS-YSP 1690
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1632 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1691
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1692 SPSYSPTSPSYSPTSPS-YSP 1711
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1639 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1698
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1699 SPSYSPTSPSYSPTSPS-YSP 1718
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1653 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1712
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1713 SPSYSPTSPNYSPSRPN-YTP 1732
Score = 116 bits (291), Expect = 1e-24
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S + + N P
Sbjct: 1706 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1735
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1726
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S S Y+P
Sbjct: 1727 RPNYTPTSPSYSPTSPS-YSP 1746
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P
Sbjct: 1674 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1733
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1734 SPSYSPTSPSYSPTSPN-YTP 1753
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1583 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1642
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1643 SPSYSPTSPSYSPTSPS-YSP 1662
Score = 110 bits (276), Expect = 6e-23
Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP
Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1747
Query: 404 STGYSPSQPGYSPSS 360
S Y+P P YSP+S
Sbjct: 1748 SPNYTPMSPNYSPTS 1762
Score = 102 bits (254), Expect = 2e-20
Identities = 55/92 (59%), Positives = 62/92 (67%), Gaps = 16/92 (17%)
Frame = -2
Query: 569 SSPYSPTS---------------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
S YSPTS PSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP
Sbjct: 1565 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1624
Query: 434 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1655
Score = 84.3 bits (207), Expect = 6e-15
Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP
Sbjct: 1709 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1763
Score = 75.1 bits (183), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
+SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+
Sbjct: 1716 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1764
[85][TOP]
>UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 8 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1C
Length = 1719
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1559 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1619 SPSYSPTSPSYSPTSPS-YSP 1638
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1647 SPSYSPTSPSYSPTSPS-YSP 1666
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1668 SPSYSPTSPNYSPSRPN-YTP 1687
Score = 116 bits (291), Expect = 1e-24
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S + + N P
Sbjct: 1661 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1690
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1681
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S S Y+P
Sbjct: 1682 RPNYTPTSPSYSPTSPS-YSP 1701
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1689 SPSYSPTSPSYSPTSPN-YTP 1708
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1538 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1598 SPSYSPTSPSYSPTSPS-YSP 1617
Score = 110 bits (276), Expect = 6e-23
Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1702
Query: 404 STGYSPSQPGYSPSS 360
S Y+P P YSP+S
Sbjct: 1703 SPNYTPMSPNYSPTS 1717
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1507 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1566
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1567 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603
Score = 84.3 bits (207), Expect = 6e-15
Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP
Sbjct: 1664 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1718
Score = 75.1 bits (183), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
+SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+
Sbjct: 1671 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1719
Score = 61.2 bits (147), Expect = 6e-08
Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 24/100 (24%)
Frame = -2
Query: 569 SSPYSPT-SPSYSPTSPSYSPTSPS--YSPS-----SPTYSPS---------------SP 459
+S +SP SP++SPT S PS Y PS SP+YSP+ SP
Sbjct: 1484 ASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSP 1543
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1544 SYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS-YSP 1582
Score = 57.0 bits (136), Expect = 1e-06
Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Frame = -2
Query: 554 PTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--G 396
P + +SP SP++SPT S P SP PSSPY SP YSP+SP + P + G
Sbjct: 1482 PDASGFSPGYSPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGG 1537
Query: 395 YSPSQPGYSPSSTSQYTP 342
Y+P P YSP+S S Y+P
Sbjct: 1538 YTPQSPSYSPTSPS-YSP 1554
[86][TOP]
>UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 7 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1B
Length = 1858
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1559 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1619 SPSYSPTSPSYSPTSPS-YSP 1638
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1647 SPSYSPTSPSYSPTSPS-YSP 1666
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1668 SPSYSPTSPNYSPSRPN-YTP 1687
Score = 116 bits (291), Expect = 1e-24
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S + + N P
Sbjct: 1661 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1690
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1681
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S S Y+P
Sbjct: 1682 RPNYTPTSPSYSPTSPS-YSP 1701
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1689 SPSYSPTSPSYSPTSPN-YTP 1708
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1538 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1598 SPSYSPTSPSYSPTSPS-YSP 1617
Score = 113 bits (282), Expect = 1e-23
Identities = 56/81 (69%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1702
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P P YSP+S S Y+P
Sbjct: 1703 SPNYTPMSPNYSPTSPS-YSP 1722
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1747 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1806
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1807 TSPKYSPTSPTYSPTSPKGSTYSP 1830
Score = 108 bits (271), Expect = 2e-22
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1706 YTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1765
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1766 SPTYSPTTPKYSPTSPT-YSP 1785
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1734 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1793
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1794 SPKYSPTSPTYSPTS-PKYSP 1813
Score = 107 bits (268), Expect = 5e-22
Identities = 52/81 (64%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP Y+P SP+YSPTSPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1699 YSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1759 SPKYSPTSPTYSP-TTPKYSP 1778
Score = 107 bits (267), Expect = 7e-22
Identities = 51/81 (62%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1724 SPKYTPTSPSYSPSS-PEYTP 1743
Score = 107 bits (267), Expect = 7e-22
Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+SP S TSP Y+P+SP +SPS
Sbjct: 1678 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPS 1737
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
+ Y+P+ P YSP+S +Y+P
Sbjct: 1738 SPEYTPTSPKYSPTS-PKYSP 1757
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1761 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1820
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1821 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1853
Score = 106 bits (265), Expect = 1e-21
Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP YSP+SP+++P
Sbjct: 1671 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPT 1730
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSPS P Y+P+S +Y+P
Sbjct: 1731 SPSYSPSSPEYTPTS-PKYSP 1750
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1726 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1785
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1786 TSPVYTPTSPKYSPTSPT-YSP 1806
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1507 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1566
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1567 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1775 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1834
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1835 YSPTSPTYSLTSPAISPDDSDE 1856
Score = 61.2 bits (147), Expect = 6e-08
Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 24/100 (24%)
Frame = -2
Query: 569 SSPYSPT-SPSYSPTSPSYSPTSPS--YSPS-----SPTYSPS---------------SP 459
+S +SP SP++SPT S PS Y PS SP+YSP+ SP
Sbjct: 1484 ASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSP 1543
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1544 SYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS-YSP 1582
Score = 57.0 bits (136), Expect = 1e-06
Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Frame = -2
Query: 554 PTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--G 396
P + +SP SP++SPT S P SP PSSPY SP YSP+SP + P + G
Sbjct: 1482 PDASGFSPGYSPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGG 1537
Query: 395 YSPSQPGYSPSSTSQYTP 342
Y+P P YSP+S S Y+P
Sbjct: 1538 YTPQSPSYSPTSPS-YSP 1554
[87][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1A
Length = 1767
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1607 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1674 SPSYSPTSPSYSPTSPS-YSP 1693
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSP 1721
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1716 SPSYSPTSPNYSPSRPN-YTP 1735
Score = 116 bits (291), Expect = 1e-24
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S + + N P
Sbjct: 1709 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1738
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1729
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S S Y+P
Sbjct: 1730 RPNYTPTSPSYSPTSPS-YSP 1749
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1736
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1737 SPSYSPTSPSYSPTSPN-YTP 1756
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1586 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1645
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1646 SPSYSPTSPSYSPTSPS-YSP 1665
Score = 110 bits (276), Expect = 6e-23
Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1750
Query: 404 STGYSPSQPGYSPSS 360
S Y+P P YSP+S
Sbjct: 1751 SPNYTPMSPNYSPTS 1765
Score = 84.3 bits (207), Expect = 6e-15
Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP
Sbjct: 1712 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1766
Score = 75.1 bits (183), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
+SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+
Sbjct: 1719 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1767
Score = 73.9 bits (180), Expect = 8e-12
Identities = 44/86 (51%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPT--------YSPSSPYNSGTSPDYSPSSP 417
PSSPY P SP S SPSYSP+SP Y+P SP S TSP YSP+SP
Sbjct: 1551 PSSPYIP-----SPGELSCGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSP 1605
Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S YSP+ P YSP+S S Y+P
Sbjct: 1606 SYSPTSPNYSPTSPSYSPTSPS-YSP 1630
Score = 55.8 bits (133), Expect = 2e-06
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGTSPDYSPSSPQFS- 408
+SP S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS + S
Sbjct: 1507 WSPRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPSPGELSC 1564
Query: 407 --PSTGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P Y P S YTP++
Sbjct: 1565 GAMSPSYSPTSPAYEPRSPGGYTPQS 1590
[88][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B19
Length = 1693
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1533 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1592
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1593 SPSYSPTSPSYSPTSPS-YSP 1612
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1540 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1599
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1600 SPSYSPTSPSYSPTSPS-YSP 1619
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1561 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1620
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1621 SPSYSPTSPSYSPTSPS-YSP 1640
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1568 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1627
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1628 SPSYSPTSPSYSPTSPS-YSP 1647
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1582 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1641
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1642 SPSYSPTSPNYSPSRPN-YTP 1661
Score = 116 bits (291), Expect = 1e-24
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1575 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1634
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S + + N P
Sbjct: 1635 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1664
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1596 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1655
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S S Y+P
Sbjct: 1656 RPNYTPTSPSYSPTSPS-YSP 1675
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P
Sbjct: 1603 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1662
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1663 SPSYSPTSPSYSPTSPN-YTP 1682
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1512 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1571
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1572 SPSYSPTSPSYSPTSPS-YSP 1591
Score = 110 bits (276), Expect = 6e-23
Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP
Sbjct: 1617 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1676
Query: 404 STGYSPSQPGYSPSS 360
S Y+P P YSP+S
Sbjct: 1677 SPNYTPMSPNYSPTS 1691
Score = 94.4 bits (233), Expect = 6e-18
Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 16/94 (17%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
+P + SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP S TS
Sbjct: 1485 TPGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1544
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1545 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1577
Score = 84.3 bits (207), Expect = 6e-15
Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP
Sbjct: 1638 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1692
Score = 75.1 bits (183), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
+SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+
Sbjct: 1645 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1693
[89][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B17
Length = 1788
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1716 SPSYSPTSPSYSPTSPS-YSP 1735
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1723 SPSYSPTSPSYSPTSPS-YSP 1742
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1737 SPSYSPTSPNYSPSRPN-YTP 1756
Score = 116 bits (291), Expect = 1e-24
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S + + N P
Sbjct: 1730 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1759
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1750
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S S Y+P
Sbjct: 1751 RPNYTPTSPSYSPTSPS-YSP 1770
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1757
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1758 SPSYSPTSPSYSPTSPN-YTP 1777
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686
Score = 110 bits (276), Expect = 6e-23
Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1771
Query: 404 STGYSPSQPGYSPSS 360
S Y+P P YSP+S
Sbjct: 1772 SPNYTPMSPNYSPTS 1786
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672
Score = 84.3 bits (207), Expect = 6e-15
Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP
Sbjct: 1733 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1787
Score = 75.1 bits (183), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
+SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+
Sbjct: 1740 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1788
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1545 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1597
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1598 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1623
[90][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B16
Length = 1922
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1716 SPSYSPTSPSYSPTSPS-YSP 1735
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1737 SPSYSPTSPNYSPSRPN-YTP 1756
Score = 116 bits (291), Expect = 1e-24
Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1750
Query: 401 -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315
Y+P+ P YSP+S S YTP + + P
Sbjct: 1751 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1786
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1811 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1870
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1871 TSPKYSPTSPTYSPTSPKGSTYSP 1894
Score = 109 bits (272), Expect = 2e-22
Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P
Sbjct: 1719 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1778
Query: 404 ---------STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1779 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1807
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1798 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1857
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1858 SPKYSPTSPTYSPTS-PKYSP 1877
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1825 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1884
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1885 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1917
Score = 103 bits (258), Expect = 7e-21
Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408
+SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++
Sbjct: 1747 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1806
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S +Y+P
Sbjct: 1807 PTSPKYSPTSPKYSPTS-PKYSP 1828
Score = 102 bits (253), Expect = 3e-20
Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S
Sbjct: 1785 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1844
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P Y+P+S +Y+P
Sbjct: 1845 PTYSPTSPVYTPTS-PKYSP 1863
Score = 101 bits (251), Expect = 5e-20
Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP Y+P SP+YSPT SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++S
Sbjct: 1768 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1827
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S + Y+P
Sbjct: 1828 PTSPTYSPTTPKYSPTSPT-YSP 1849
Score = 100 bits (250), Expect = 6e-20
Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399
SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T
Sbjct: 1779 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1838
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S YTP
Sbjct: 1839 KYSPTSPTYSPTS-PVYTP 1856
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1839 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1898
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1899 YSPTSPTYSLTSPAISPDDSDE 1920
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1545 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1597
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1598 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1623
[91][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis lupus
familiaris RepID=UPI0001951285
Length = 1969
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743
Score = 117 bits (292), Expect = 8e-25
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPS + YTP
Sbjct: 1738 SPSYSPTSPNYSPSRPN-YTP 1757
Score = 116 bits (291), Expect = 1e-24
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S + + N P
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1760
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1751
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
Y+P+ P YSP+S S Y+P
Sbjct: 1752 RPNYTPTSPSYSPTSPS-YSP 1771
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687
Score = 111 bits (278), Expect = 4e-23
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1772
Query: 404 STGYSPSQPGYSPSSTSQYT 345
S Y+P P YSP+S + T
Sbjct: 1773 SPNYTPMSPNYSPTSPNSPT 1792
Score = 110 bits (276), Expect = 6e-23
Identities = 52/80 (65%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+SP+SP SPTSPSYSPTSPSYSP+SP Y+P SPTY+PSSP S +SP YSP+SP+++P S
Sbjct: 1783 YSPTSPNSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTS 1842
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSPS P Y+P+S +Y+P
Sbjct: 1843 PSYSPSSPEYTPTS-PKYSP 1861
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1858 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1917
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1918 TSPKYSPTSPTYSPTSPKGSTYSP 1941
Score = 110 bits (274), Expect = 1e-22
Identities = 56/96 (58%), Positives = 68/96 (70%), Gaps = 15/96 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1779
Query: 404 -------------STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSPSS +YTP++
Sbjct: 1780 SPNYSPTSPNSPTSPSYSPTSPSYSPSS-PRYTPQS 1814
Score = 109 bits (273), Expect = 1e-22
Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+SP NS TSP YSP+SP +SPS
Sbjct: 1748 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP-NSPTSPSYSPTSPSYSPS 1806
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 1807 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1833
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 1817 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1876
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1877 SPTYSPTTPKYSPTSPT-YSP 1896
Score = 108 bits (270), Expect = 3e-22
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 1809 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1868
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1869 TSPKYSPTSPTYSP-TTPKYSP 1889
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 1845 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1904
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 1905 SPKYSPTSPTYSPTS-PKYSP 1924
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1872 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1931
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1932 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1964
Score = 105 bits (261), Expect = 3e-21
Identities = 50/83 (60%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+P SP+Y+P+SPSYSP+SPSYSP+SP Y+P+SP S +SP+Y+P+SP++SP
Sbjct: 1803 YSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPT 1862
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP+S + Y+P T
Sbjct: 1863 SPKYSPTSPKYSPTSPT-YSPTT 1884
Score = 104 bits (259), Expect = 6e-21
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSP+ SPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 1776 YTPMSPNYSPTSPN-SPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1834
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1835 SPKYTPTSPSYSPSS-PEYTP 1854
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 1837 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1896
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 1897 TSPVYTPTSPKYSPTSPT-YSP 1917
Score = 100 bits (249), Expect = 8e-20
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 100 bits (248), Expect = 1e-19
Identities = 50/83 (60%), Positives = 65/83 (78%), Gaps = 5/83 (6%)
Frame = -2
Query: 575 SPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
SP+SP SPTSPSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+SP +S
Sbjct: 1787 SPNSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYS 1846
Query: 407 PST-GYSPSQPGYSPSSTSQYTP 342
PS+ Y+P+ P YSP+S +Y+P
Sbjct: 1847 PSSPEYTPTSPKYSPTS-PKYSP 1868
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1886 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1945
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1946 YSPTSPTYSLTSPAISPDDSDE 1967
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624
[92][TOP]
>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3ZES3_BRAFL
Length = 1934
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743
Score = 117 bits (293), Expect = 6e-25
Identities = 58/86 (67%), Positives = 71/86 (82%), Gaps = 2/86 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP++SP
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDN 327
S YSP+ P YSP+S S Y+P N
Sbjct: 1759 SPSYSPTSPSYSPASPS-YSPTILSN 1783
Score = 115 bits (287), Expect = 3e-24
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y+P+S +Y+P
Sbjct: 1738 SPSYSPTSPNYTPTS-PKYSP 1757
Score = 114 bits (285), Expect = 5e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSP SP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1615 YSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694
Score = 111 bits (278), Expect = 4e-23
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+P SP YSPTSPSYSPTSPSYSP SP+YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1609 TPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687
Score = 103 bits (258), Expect = 7e-21
Identities = 51/85 (60%), Positives = 65/85 (76%), Gaps = 4/85 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSS YSP SPSYSP++P Y+PTSP YSP+SPTY+P+SP S TSP Y+P +P++SP
Sbjct: 1822 YSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPT 1881
Query: 404 STGYSPSQPGYSPSST--SQYTPKT 336
S YSP+ P YSP+S S Y+P T
Sbjct: 1882 SPKYSPTSPTYSPTSPKGSTYSPTT 1906
Score = 103 bits (256), Expect = 1e-20
Identities = 49/87 (56%), Positives = 69/87 (79%), Gaps = 1/87 (1%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP SP+Y+PTSP YSPTSPSY+P +P YSP+SP S TSP YSP+SP+ S
Sbjct: 1842 KYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGST 1901
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNK 324
YSP+ PGYSP+S + Y+P++ +++
Sbjct: 1902 ---YSPTTPGYSPASPT-YSPESPESR 1924
Score = 102 bits (254), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SPSSP YSP+SP YSPTSP+YSP+S YSP+SP+YSPS+P + TSP YSP+SP ++P
Sbjct: 1800 QYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTP 1859
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y+P T +Y+P
Sbjct: 1860 TSPKYSPTSPSYTP-DTPKYSP 1880
Score = 99.8 bits (247), Expect = 1e-19
Identities = 57/113 (50%), Positives = 68/113 (60%), Gaps = 34/113 (30%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT-------------- 444
+SP+SP YSPTSP+Y+PTSP YSPTSPSYSP+SP+YSP+SP S T
Sbjct: 1734 YSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTILSNLTQLQPHLTP 1793
Query: 443 -----------SPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 342
SP YSPSSP++SP S YSP+ P YSP ST +YTP
Sbjct: 1794 VHSHVTQYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSP-STPKYTP 1845
Score = 96.7 bits (239), Expect = 1e-18
Identities = 59/113 (52%), Positives = 68/113 (60%), Gaps = 34/113 (30%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------PSSPTYSPSSPYNSGT 444
+SP+SP YSPTSPSYSPTSPSYSPTSPSYS P+SP YSP+SP S T
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPT 1765
Query: 443 SPDYSPSSPQFSPS-------------------TGYSPSQPGYSPSSTSQYTP 342
SP YSP+SP +SP+ T YSPS P YSPSS +Y+P
Sbjct: 1766 SPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSS-PKYSP 1817
Score = 96.3 bits (238), Expect = 2e-18
Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 453
P+SPY P+ SPSYSP SP+ YSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 PASPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNY 1636
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673
Score = 93.2 bits (230), Expect = 1e-17
Identities = 56/122 (45%), Positives = 67/122 (54%), Gaps = 40/122 (32%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPT-------------------------SPSYSPSSP 480
++SP+SP YSPTSPSYSP SPSYSPT SP YSPSSP
Sbjct: 1754 KYSPTSPSYSPTSPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSSP 1813
Query: 479 TYSPSSPYNSGTSPDYSPSSPQFSPSTG--------YSPSQPGYSPSS------TSQYTP 342
YSP+SP S +S YSP+SP +SPST YSP+ P Y+P+S + YTP
Sbjct: 1814 KYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTP 1873
Query: 341 KT 336
T
Sbjct: 1874 DT 1875
Score = 70.9 bits (172), Expect = 7e-11
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 4/58 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSP---SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
++SP+SP YSPTSP+YSPTSP +YSPT+P YSP+SPTYSP SP + T + S
Sbjct: 1877 KYSPTSPKYSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSPESPESRATQEEEEDES 1934
Score = 58.2 bits (139), Expect = 5e-07
Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQF 411
FSPS+ + S + SP++SPT S P SP P+SPY SP YSP+SP +
Sbjct: 1545 FSPSAASDASGMSPAGYSPAWSPTPGS--PGSP--GPASPYIPSPGGPMSPSYSPASPAY 1600
Query: 410 SP---------STGYSPSQPGYSPSSTSQYTP 342
P S GYSP+ P YSP+S S Y+P
Sbjct: 1601 MPRSPGGMTPQSPGYSPTSPSYSPTSPS-YSP 1631
[93][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
Length = 1935
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708
Score = 117 bits (292), Expect = 8e-25
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1723
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + YTP
Sbjct: 1724 SPSYSPTSPSYSPTSPN-YTP 1743
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPN-YSP 1715
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1716
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1717 SPNYTPTSPSYSPTSPS-YSP 1736
Score = 115 bits (288), Expect = 2e-24
Identities = 55/83 (66%), Positives = 71/83 (85%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP
Sbjct: 1699 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSPSS +YTP++
Sbjct: 1759 SPSYSPTSPSYSPSS-PRYTPQS 1780
Score = 115 bits (287), Expect = 3e-24
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSP-SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP SS YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1594 YSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP + TSP YSP+SP +SP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1737
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1738 SPNYTPTSPNYSPTSPS-YSP 1757
Score = 112 bits (281), Expect = 2e-23
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP
Sbjct: 1741 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1800
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSPSS +YTP
Sbjct: 1801 SPKYTPTSPPYSPSS-PEYTP 1820
Score = 112 bits (279), Expect = 3e-23
Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1713 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1772
Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342
+ Y+PS P YSPSS S Y+P
Sbjct: 1773 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1799
Score = 111 bits (278), Expect = 4e-23
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++P SP YSPTSPSYSPTSPSYSPTS +YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1573 YTPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1633 SPSYSPTSPSYSPTSPS-YSP 1652
Score = 110 bits (274), Expect = 1e-22
Identities = 54/84 (64%), Positives = 66/84 (78%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+FSP+SP YSPTSP YSPT P+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 1824 KFSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1883
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1884 TSPQYSPTSPTYSPTSPKGSTYSP 1907
Score = 107 bits (266), Expect = 9e-22
Identities = 52/100 (52%), Positives = 69/100 (69%), Gaps = 12/100 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT P+YSPT+P YSPTSP+YSP+SP Y+P+SP S TSP YSP+SPQ+SP
Sbjct: 1831 KYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSP 1890
Query: 404 S-----------TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 1891 TSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1930
Score = 105 bits (263), Expect = 2e-21
Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
++PSSP YSP+SPSYSPTSP Y+PTSP YSPSSP Y+P+SP S TSP YSP+SP++SP+
Sbjct: 1783 YTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPT 1842
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S + Y+P
Sbjct: 1843 GPTYSPTTPKYSPTSPT-YSP 1862
Score = 105 bits (262), Expect = 3e-21
Identities = 51/82 (62%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP YSPSSP + TSP +SP+SP++SP
Sbjct: 1775 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSP 1834
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 1835 TSPKYSPTGPTYSP-TTPKYSP 1855
Score = 102 bits (255), Expect = 2e-20
Identities = 49/81 (60%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P
Sbjct: 1762 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPT 1821
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S +SP+ P YSP+S +Y+P
Sbjct: 1822 SPKFSPTSPKYSPTS-PKYSP 1841
Score = 100 bits (248), Expect = 1e-19
Identities = 49/89 (55%), Positives = 64/89 (71%), Gaps = 9/89 (10%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP +SPTSP YSP+SP YSP+ P S T+P YSP+SP +SP
Sbjct: 1803 KYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSP 1862
Query: 404 --------STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1863 TSPVYTPTSPKYSPTSPTYSPTS-PQYSP 1890
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P
Sbjct: 1720 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1779
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP ++PS+ YSPS P YSP+S +YTP
Sbjct: 1780 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1806
Score = 97.4 bits (241), Expect = 7e-19
Identities = 55/98 (56%), Positives = 64/98 (65%), Gaps = 21/98 (21%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453
PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1542 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSSNY 1601
Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1602 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1638
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1852 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSPTSPG 1911
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 1912 YSPTSPTYSLTSPAISPDDSDE 1933
Score = 92.8 bits (229), Expect = 2e-17
Identities = 50/88 (56%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+
Sbjct: 1748 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1807
Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342
SP +SPS+ Y+P+ P +SP+S +Y+P
Sbjct: 1808 SPPYSPSSPEYTPTSPKFSPTS-PKYSP 1834
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP
Sbjct: 1511 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1563
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P P YSP+S S Y+P
Sbjct: 1564 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1589
[94][TOP]
>UniRef100_O96446 DNA-directed RNA polymerase n=1 Tax=Vairimorpha necatrix
RepID=O96446_9MICR
Length = 1605
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1502 YSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1561
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1562 SPSYSPTSPSYSPTSPS-YSP 1581
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1495 YSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1554
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1555 SPSYSPTSPSYSPTSPS-YSP 1574
Score = 115 bits (288), Expect = 2e-24
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP
Sbjct: 1467 YSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPT 1526
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1527 SPSYSPTSPSYSPTSPS-YSP 1546
Score = 115 bits (287), Expect = 3e-24
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1488 YSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1547
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1548 SPSYSPTSPSYSPTSPS-YSP 1567
Score = 112 bits (279), Expect = 3e-23
Identities = 55/82 (67%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSP-SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P +S YSPTSP+YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP
Sbjct: 1459 RYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSP 1518
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1519 TSPSYSPTSPSYSPTSPS-YSP 1539
Score = 107 bits (267), Expect = 7e-22
Identities = 58/90 (64%), Positives = 67/90 (74%), Gaps = 5/90 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1509 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1568
Query: 404 STGYSPSQP---GYSPSSTSQYTPKTNDNK 324
S YSP+ P SPS + Y ND K
Sbjct: 1569 SPSYSPTSPSYSPTSPSYSPTY---DNDEK 1595
Score = 86.7 bits (213), Expect = 1e-15
Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S Y Y+P + YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1450 SPAYLVEGNRYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTY 1509
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1510 SPTSPSYSPTSPS-YSP 1525
Score = 55.5 bits (132), Expect = 3e-06
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -2
Query: 560 YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 384
+SP S + S +S ++SP +Y Y+P + S TSP YSP+SP +SP S YSP+
Sbjct: 1435 HSPVSENLSISSGNWSP---AYLVEGNRYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPT 1491
Query: 383 QPGYSPSSTSQYTP 342
P YSP+S + Y+P
Sbjct: 1492 SPTYSPTSPT-YSP 1504
[95][TOP]
>UniRef100_C8Z6G2 Rpo21p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z6G2_YEAST
Length = 1733
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSP 1628
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1651 SPSYSPTSPAYSPTSPS-YSP 1670
Score = 116 bits (291), Expect = 1e-24
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691
Score = 116 bits (291), Expect = 1e-24
Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
S YSP+ P YSP+S + + + PG
Sbjct: 1679 SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709
Score = 110 bits (276), Expect = 6e-23
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F SSP +SPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1595 SPSYSPTSPSYSPTSPS-YSP 1614
Score = 110 bits (274), Expect = 1e-22
Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP----- 1708
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKD 321
GYSP P YSP Q K N+N++
Sbjct: 1709 -GYSPGSPAYSPKQDEQ---KHNENEN 1731
Score = 101 bits (252), Expect = 4e-20
Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607
Score = 56.2 bits (134), Expect = 2e-06
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 450
+SP+SP YSPTSPSYSPTSP YSP SP+YSP + NS
Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732
[96][TOP]
>UniRef100_C7GKZ2 Rpo21p n=2 Tax=Saccharomyces cerevisiae RepID=C7GKZ2_YEAS2
Length = 1733
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSP 1628
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1651 SPSYSPTSPAYSPTSPS-YSP 1670
Score = 116 bits (291), Expect = 1e-24
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691
Score = 116 bits (291), Expect = 1e-24
Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
S YSP+ P YSP+S + + + PG
Sbjct: 1679 SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709
Score = 110 bits (276), Expect = 6e-23
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F SSP +SPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1595 SPSYSPTSPSYSPTSPS-YSP 1614
Score = 110 bits (274), Expect = 1e-22
Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP----- 1708
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKD 321
GYSP P YSP Q K N+N++
Sbjct: 1709 -GYSPGSPAYSPKQDEQ---KHNENEN 1731
Score = 101 bits (252), Expect = 4e-20
Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607
Score = 56.2 bits (134), Expect = 2e-06
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 450
+SP+SP YSPTSPSYSPTSP YSP SP+YSP + NS
Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732
[97][TOP]
>UniRef100_C4VAM1 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4VAM1_NOSCE
Length = 1612
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1472 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1531
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1532 SPSYSPTSPSYSPTSPS-YSP 1551
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1493 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1552
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1553 SPSYSPTSPSYSPTSPS-YSP 1572
Score = 115 bits (287), Expect = 3e-24
Identities = 57/94 (60%), Positives = 68/94 (72%), Gaps = 9/94 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1573
Query: 404 -------STGYSPSQPGYSPSSTSQYTPKTNDNK 324
S YSP+ P YSP+ + K N+ K
Sbjct: 1574 SPSYSPTSLSYSPTSPSYSPTGYKKDKDKKNERK 1607
Score = 114 bits (284), Expect = 7e-24
Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
S S YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1453 SASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1512
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1513 SYSPTSPSYSPTSPS-YSP 1530
Score = 108 bits (269), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FS SP Y SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1444 FSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1503
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1504 SPSYSPTSPSYSPTSPS-YSP 1523
Score = 99.8 bits (247), Expect = 1e-19
Identities = 51/82 (62%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP S +S SPSY SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1436 KYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1495
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1496 TSPSYSPTSPSYSPTSPS-YSP 1516
Score = 89.0 bits (219), Expect = 2e-16
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390
S YSP +S SPSY SPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YS
Sbjct: 1435 SKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1494
Query: 389 PSQPGYSPSSTSQYTP 342
P+ P YSP+S S Y+P
Sbjct: 1495 PTSPSYSPTSPS-YSP 1509
Score = 68.2 bits (165), Expect = 5e-10
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = -2
Query: 548 SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 372
SP+Y YSP +S SP+Y +SP S TSP YSP+SP +SP S YSP+ P Y
Sbjct: 1427 SPAYLAEESKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1486
Query: 371 SPSSTSQYTP 342
SP+S S Y+P
Sbjct: 1487 SPTSPS-YSP 1495
Score = 54.7 bits (130), Expect = 5e-06
Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = -2
Query: 560 YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 384
YSP S S S +S ++SP +Y YSP S SP Y +SP +SP S YSP+
Sbjct: 1412 YSPVSESQSISSGNWSP---AYLAEESKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPT 1468
Query: 383 QPGYSPSSTSQYTP 342
P YSP+S S Y+P
Sbjct: 1469 SPSYSPTSPS-YSP 1481
[98][TOP]
>UniRef100_B3LH31 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a
RepID=B3LH31_YEAS1
Length = 1733
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSP 1628
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1651 SPSYSPTSPAYSPTSPS-YSP 1670
Score = 116 bits (291), Expect = 1e-24
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691
Score = 116 bits (291), Expect = 1e-24
Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
S YSP+ P YSP+S + + + PG
Sbjct: 1679 SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709
Score = 110 bits (276), Expect = 6e-23
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F SSP +SPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1595 SPSYSPTSPSYSPTSPS-YSP 1614
Score = 110 bits (274), Expect = 1e-22
Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP----- 1708
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKD 321
GYSP P YSP Q K N+N++
Sbjct: 1709 -GYSPGSPAYSPKQDEQ---KHNENEN 1731
Score = 101 bits (251), Expect = 5e-20
Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Frame = -2
Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1589
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1590 SYSPTSPSYSPTSPS-YSP 1607
Score = 79.0 bits (193), Expect = 3e-13
Identities = 44/80 (55%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSPYS--PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
SP Y PTSP + +SP +SPTSP+YSP+SP YSP+SP S TSP YS SPS
Sbjct: 1521 SPFGAYGEPPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYS----PTSPS 1576
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1577 --YSPTSPSYSPTSPS-YSP 1593
Score = 56.2 bits (134), Expect = 2e-06
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 450
+SP+SP YSPTSPSYSPTSP YSP SP+YSP + NS
Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732
[99][TOP]
>UniRef100_P04050 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Saccharomyces
cerevisiae RepID=RPB1_YEAST
Length = 1733
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSP 1628
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1651 SPSYSPTSPAYSPTSPS-YSP 1670
Score = 116 bits (291), Expect = 1e-24
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691
Score = 116 bits (291), Expect = 1e-24
Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
S YSP+ P YSP+S + + + PG
Sbjct: 1679 SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709
Score = 110 bits (276), Expect = 6e-23
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F SSP +SPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1595 SPSYSPTSPSYSPTSPS-YSP 1614
Score = 110 bits (274), Expect = 1e-22
Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP----- 1708
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKD 321
GYSP P YSP Q K N+N++
Sbjct: 1709 -GYSPGSPAYSPKQDEQ---KHNENEN 1731
Score = 101 bits (252), Expect = 4e-20
Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607
Score = 56.2 bits (134), Expect = 2e-06
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 450
+SP+SP YSPTSPSYSPTSP YSP SP+YSP + NS
Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732
[100][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
Length = 1752
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1686
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1687 SPSYSPTSPSYSPTSPS-YSP 1706
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1707
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1708 SPSYSPTSPSYSPTSPS-YSP 1727
Score = 117 bits (293), Expect = 6e-25
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1728
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1729 SPSYSPTSPSYSPTSPS-YSP 1748
Score = 116 bits (290), Expect = 1e-24
Identities = 56/77 (72%), Positives = 65/77 (84%), Gaps = 2/77 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1676 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1735
Query: 404 STGYSPSQPGYSPSSTS 354
S YSP+ P YSP+S S
Sbjct: 1736 SPSYSPTSPSYSPTSPS 1752
Score = 114 bits (286), Expect = 4e-24
Identities = 58/88 (65%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+
Sbjct: 1599 YSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1659 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1685
Score = 114 bits (285), Expect = 5e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYS TSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1585 YSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1645 SPSYSPTSPSYSPTSPS-YSP 1664
Score = 113 bits (283), Expect = 9e-24
Identities = 57/87 (65%), Positives = 67/87 (77%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
+SPSSP Y P+SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+S
Sbjct: 1558 YSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTS 1617
Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTP 342
P +SP S YSP+ P YSP+S S Y+P
Sbjct: 1618 PSYSPTSPSYSPTSPSYSPTSPS-YSP 1643
Score = 94.7 bits (234), Expect = 5e-18
Identities = 48/77 (62%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-PSTGY 393
S YSP+SP YS TSP+Y P+SPSYSP+SP+YSP+SP S TSP YSP+SP +S S Y
Sbjct: 1555 SPSYSPSSPGYS-TSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSY 1613
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S S Y+P
Sbjct: 1614 SPTSPSYSPTSPS-YSP 1629
Score = 79.3 bits (194), Expect = 2e-13
Identities = 50/89 (56%), Positives = 56/89 (62%), Gaps = 13/89 (14%)
Frame = -2
Query: 569 SSPY----SP--TSPSYSPTSPSYSPTSPSYSPSSPTYS------PSSPYNSGTSPDYSP 426
+SPY SP TSP S SP Y TSPSYSPSSP YS PSSP S TSP YSP
Sbjct: 1528 ASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSP 1587
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP +SP S YSP+ P YS +S S Y+P
Sbjct: 1588 TSPSYSPTSPSYSPTSPSYSATSPS-YSP 1615
[101][TOP]
>UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR
Length = 1706
Score = 117 bits (292), Expect = 8e-25
Identities = 57/89 (64%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1615 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1674
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
S YSP+ P YSP+S + Y+P D+K D
Sbjct: 1675 SPAYSPTSPAYSPTSPA-YSPSGGDDKKD 1702
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1517 YSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1576
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1577 SPAYSPTSPAYSPTSPA-YSP 1596
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1538 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1597
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1598 SPAYSPTSPAYSPTSPA-YSP 1617
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1559 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1618
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1619 SPAYSPTSPAYSPTSPA-YSP 1638
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1580 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1639
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1640 SPAYSPTSPAYSPTSPA-YSP 1659
Score = 106 bits (264), Expect = 1e-21
Identities = 51/77 (66%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1514 SPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1573
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S + Y+P
Sbjct: 1574 SPTSPAYSPTSPA-YSP 1589
Score = 100 bits (248), Expect = 1e-19
Identities = 54/88 (61%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTSP+YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+
Sbjct: 1587 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1646
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1647 SPAYSPTSPAYSPTSPAYSPTSPA-YSP 1673
Score = 97.4 bits (241), Expect = 7e-19
Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
F+ S + SP+YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S
Sbjct: 1504 FASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1563
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S + Y+P
Sbjct: 1564 PAYSPTSPAYSPTSPA-YSP 1582
Score = 87.4 bits (215), Expect = 7e-16
Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 18/97 (18%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSP-----------------TSPSYSPTSPSYSPSSPTYSPSSPYNS 450
FSP+ + SP+YSP SP+YSPTSP YSP+SP YSP+SP S
Sbjct: 1480 FSPAVGAASFSPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPAYS 1539
Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
TSP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1540 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1575
Score = 62.8 bits (151), Expect = 2e-08
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSP-S 402
+SP+ ++SP + S SP+YSP S +Y S Y +G SP YSP+SPQ+SP S
Sbjct: 1470 ASPFVDGGAAFSPAVGAAS-FSPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTS 1528
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S + Y+P
Sbjct: 1529 PAYSPTSPAYSPTSPA-YSP 1547
[102][TOP]
>UniRef100_Q9BMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=Q9BMP3_MONBE
Length = 1743
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1620 YSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPT 1679
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1680 SPSYSPTSPNYSPTSPS-YSP 1699
Score = 116 bits (290), Expect = 1e-24
Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP
Sbjct: 1655 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1714
Query: 404 --------STGYSPSQPGYSPSSTSQYTP 342
S GYSP+ PGYSP+S Y+P
Sbjct: 1715 ANGTSGPTSPGYSPTSPGYSPTSPG-YSP 1742
Score = 115 bits (288), Expect = 2e-24
Identities = 58/91 (63%), Positives = 69/91 (75%), Gaps = 9/91 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP
Sbjct: 1627 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1686
Query: 404 -------STGYSPSQPGYSPSSTSQYTPKTN 333
S YSP+ P YSP+S S Y+P N
Sbjct: 1687 SPNYSPTSPSYSPTSPNYSPTSPS-YSPTAN 1716
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SPSYSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP
Sbjct: 1613 YSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1672
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1673 SPNYSPTSPSYSPTSPN-YSP 1692
Score = 112 bits (279), Expect = 3e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SP+SP YSPTSP YSP+SPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1607 SPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTS 1666
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1667 PSYSPTSPNYSPTSPS-YSP 1685
Score = 107 bits (266), Expect = 9e-22
Identities = 58/96 (60%), Positives = 67/96 (69%), Gaps = 17/96 (17%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPS--------YSPTSPSYSPSSPTYSPSSPYNSG 447
+SPSSP YSPTSPSYSPTSP+ YSPTSP YSPSSP+YSP+SP S
Sbjct: 1577 YSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSP 1636
Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1637 TSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPS-YSP 1671
Score = 106 bits (265), Expect = 1e-21
Identities = 58/98 (59%), Positives = 68/98 (69%), Gaps = 19/98 (19%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSP--------SYSPSSPTYSPSSPYNSGTSPDYS 429
FSP+SP ++PTSP YSPTSPSYSPTSP SYSP+SP+YSPSSP + SP YS
Sbjct: 1533 FSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYS 1592
Query: 428 PSSPQFSP---------STGYSPSQPGYSPSSTSQYTP 342
P+SP +SP S GYSP+ PGYSPSS S Y+P
Sbjct: 1593 PTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPS-YSP 1629
Score = 100 bits (248), Expect = 1e-19
Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYS 429
+SP+SP YSPTSPSYSP+SP+Y+ SP+YSP+SP+YSP+SP S TSP YS
Sbjct: 1555 YSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYS 1614
Query: 428 PSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
P+SP +SPS+ YSP+ P YSP+S S Y+P
Sbjct: 1615 PTSPGYSPSSPSYSPTSPNYSPTSPS-YSP 1643
Score = 95.5 bits (236), Expect = 3e-18
Identities = 48/78 (61%), Positives = 58/78 (74%), Gaps = 5/78 (6%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQF- 411
+ PSSP YSPTSPSYSPTSP SPTSP +SP+SP ++P+SP+ S TSP YSP+SP
Sbjct: 1504 YDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVG 1563
Query: 410 -SPSTGYSPSQPGYSPSS 360
+ S YSP+ P YSPSS
Sbjct: 1564 GAQSPSYSPTSPSYSPSS 1581
Score = 92.4 bits (228), Expect = 2e-17
Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 18/97 (18%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYNSGT-SPDYS 429
+SP+SP YSPTSP SPTSP +SP TSP YSP+SP+YSP+SP G SP YS
Sbjct: 1512 YSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYS 1571
Query: 428 PSSPQFSPST--------GYSPSQPGYSPSSTSQYTP 342
P+SP +SPS+ YSP+ P YSP+S + +P
Sbjct: 1572 PTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSP 1608
Score = 90.1 bits (222), Expect = 1e-16
Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 9/68 (13%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--------SPYNSGTSPDYSP 426
+SP+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+ SP S TSP YSP
Sbjct: 1676 YSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPGYSP 1735
Query: 425 SSPQFSPS 402
+SP +SPS
Sbjct: 1736 TSPGYSPS 1743
Score = 72.0 bits (175), Expect = 3e-11
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPS-YSPSSPTYSPSSPYNSGTSPDYSPSSPQ-FSP-STG 396
SP SP SP Y P+SP+ YSP+SP+YSP+SP S TSP +SP+SP F+P S
Sbjct: 1488 SPGGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPH 1547
Query: 395 YSPSQPGYSPSS 360
YSP+ P YSP+S
Sbjct: 1548 YSPTSPSYSPTS 1559
[103][TOP]
>UniRef100_A9V5W6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V5W6_MONBE
Length = 1307
Score = 116 bits (290), Expect = 1e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1184 YSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPT 1243
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1244 SPSYSPTSPNYSPTSPS-YSP 1263
Score = 116 bits (290), Expect = 1e-24
Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP
Sbjct: 1219 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1278
Query: 404 --------STGYSPSQPGYSPSSTSQYTP 342
S GYSP+ PGYSP+S Y+P
Sbjct: 1279 ANGTSGPTSPGYSPTSPGYSPTSPG-YSP 1306
Score = 115 bits (288), Expect = 2e-24
Identities = 58/91 (63%), Positives = 69/91 (75%), Gaps = 9/91 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP
Sbjct: 1191 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1250
Query: 404 -------STGYSPSQPGYSPSSTSQYTPKTN 333
S YSP+ P YSP+S S Y+P N
Sbjct: 1251 SPNYSPTSPSYSPTSPNYSPTSPS-YSPTAN 1280
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SPSYSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP
Sbjct: 1177 YSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1236
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1237 SPNYSPTSPSYSPTSPN-YSP 1256
Score = 112 bits (279), Expect = 3e-23
Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SP+SP YSPTSP YSP+SPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1171 SPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTS 1230
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S S Y+P
Sbjct: 1231 PSYSPTSPNYSPTSPS-YSP 1249
Score = 107 bits (266), Expect = 9e-22
Identities = 58/96 (60%), Positives = 67/96 (69%), Gaps = 17/96 (17%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPS--------YSPTSPSYSPSSPTYSPSSPYNSG 447
+SPSSP YSPTSPSYSPTSP+ YSPTSP YSPSSP+YSP+SP S
Sbjct: 1141 YSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSP 1200
Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
TSP YSP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1201 TSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPS-YSP 1235
Score = 106 bits (265), Expect = 1e-21
Identities = 58/98 (59%), Positives = 68/98 (69%), Gaps = 19/98 (19%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSP--------SYSPSSPTYSPSSPYNSGTSPDYS 429
FSP+SP ++PTSP YSPTSPSYSPTSP SYSP+SP+YSPSSP + SP YS
Sbjct: 1097 FSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYS 1156
Query: 428 PSSPQFSP---------STGYSPSQPGYSPSSTSQYTP 342
P+SP +SP S GYSP+ PGYSPSS S Y+P
Sbjct: 1157 PTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPS-YSP 1193
Score = 100 bits (248), Expect = 1e-19
Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYS 429
+SP+SP YSPTSPSYSP+SP+Y+ SP+YSP+SP+YSP+SP S TSP YS
Sbjct: 1119 YSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYS 1178
Query: 428 PSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
P+SP +SPS+ YSP+ P YSP+S S Y+P
Sbjct: 1179 PTSPGYSPSSPSYSPTSPNYSPTSPS-YSP 1207
Score = 95.5 bits (236), Expect = 3e-18
Identities = 48/78 (61%), Positives = 58/78 (74%), Gaps = 5/78 (6%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQF- 411
+ PSSP YSPTSPSYSPTSP SPTSP +SP+SP ++P+SP+ S TSP YSP+SP
Sbjct: 1068 YDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVG 1127
Query: 410 -SPSTGYSPSQPGYSPSS 360
+ S YSP+ P YSPSS
Sbjct: 1128 GAQSPSYSPTSPSYSPSS 1145
Score = 92.4 bits (228), Expect = 2e-17
Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 18/97 (18%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYNSGT-SPDYS 429
+SP+SP YSPTSP SPTSP +SP TSP YSP+SP+YSP+SP G SP YS
Sbjct: 1076 YSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYS 1135
Query: 428 PSSPQFSPST--------GYSPSQPGYSPSSTSQYTP 342
P+SP +SPS+ YSP+ P YSP+S + +P
Sbjct: 1136 PTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSP 1172
Score = 90.1 bits (222), Expect = 1e-16
Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 9/68 (13%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--------SPYNSGTSPDYSP 426
+SP+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+ SP S TSP YSP
Sbjct: 1240 YSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPGYSP 1299
Query: 425 SSPQFSPS 402
+SP +SPS
Sbjct: 1300 TSPGYSPS 1307
Score = 72.0 bits (175), Expect = 3e-11
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPS-YSPSSPTYSPSSPYNSGTSPDYSPSSPQ-FSP-STG 396
SP SP SP Y P+SP+ YSP+SP+YSP+SP S TSP +SP+SP F+P S
Sbjct: 1052 SPGGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPH 1111
Query: 395 YSPSQPGYSPSS 360
YSP+ P YSP+S
Sbjct: 1112 YSPTSPSYSPTS 1123
[104][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
elegans RepID=RPB1_CAEEL
Length = 1852
Score = 116 bits (290), Expect = 1e-24
Identities = 59/80 (73%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
SP SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP +SPS+
Sbjct: 1606 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSS 1665
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSPS P YSP+S + Y+P
Sbjct: 1666 PSYSPSSPRYSPTSPT-YSP 1684
Score = 114 bits (286), Expect = 4e-24
Identities = 57/77 (74%), Positives = 65/77 (84%), Gaps = 2/77 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSP+SPSYSPSSP+YSPSSP S TSP YSP+SP +SP
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPT 1692
Query: 404 STGYSPSQPGYSPSSTS 354
S YSP+ P YSP+S S
Sbjct: 1693 SPTYSPTSPTYSPTSPS 1709
Score = 114 bits (285), Expect = 5e-24
Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP+YSPSSP S +SP YSP+SP +SP
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPT 1685
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1686 SPTYSPTSPTYSPTSPT-YSP 1705
Score = 114 bits (285), Expect = 5e-24
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SPSSP YSP+SPSYSP+SP YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +
Sbjct: 1654 YSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESG 1713
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
GYSPS P YSPSS + Y+P
Sbjct: 1714 GGYSPSSPKYSPSSPT-YSP 1732
Score = 113 bits (283), Expect = 9e-24
Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP SP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +S
Sbjct: 1596 YSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1655
Query: 407 PST-GYSPSQPGYSPSSTSQYTP 342
PS+ YSPS P YSPSS +Y+P
Sbjct: 1656 PSSPSYSPSSPSYSPSS-PRYSP 1677
Score = 110 bits (276), Expect = 6e-23
Identities = 61/99 (61%), Positives = 69/99 (69%), Gaps = 18/99 (18%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSP---------SYSPTSPSYSPSSPTYSPSSPYNS 450
+SPSSP YSPTSPSYSPTSP SYSPTSPSYSP+SP+YSP+SP S
Sbjct: 1575 YSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYS 1634
Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
TSP YSP+SP +SP S YSPS P YSPSS S Y+P +
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS-YSPSS 1672
Score = 110 bits (274), Expect = 1e-22
Identities = 59/87 (67%), Positives = 67/87 (77%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSS 420
+SP+SP YSPTSP+YSPTSP+YSPTSPS YSPSSP YSPSSP S TSP YSP+S
Sbjct: 1682 YSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTS 1741
Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTP 342
PQ+SP S YSPS P Y+PSS + Y P
Sbjct: 1742 PQYSPTSPQYSPSSPTYTPSSPT-YNP 1767
Score = 109 bits (273), Expect = 1e-22
Identities = 57/87 (65%), Positives = 69/87 (79%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD------YSPSS 420
+SPSSP YSP+SP YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSPSS
Sbjct: 1661 YSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSS 1720
Query: 419 PQFSPST-GYSPSQPGYSPSSTSQYTP 342
P++SPS+ YSP+ P YSP+S QY+P
Sbjct: 1721 PKYSPSSPTYSPTSPSYSPTS-PQYSP 1746
Score = 108 bits (271), Expect = 2e-22
Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 8/90 (8%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------YSPSSPYNSGTSPDYSPS 423
R+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP+ YSPSSP S +SP YSP+
Sbjct: 1674 RYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPT 1733
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
SP +SP S YSP+ P YSPSS + YTP +
Sbjct: 1734 SPSYSPTSPQYSPTSPQYSPSSPT-YTPSS 1762
Score = 108 bits (270), Expect = 3e-22
Identities = 60/102 (58%), Positives = 72/102 (70%), Gaps = 12/102 (11%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP------SS 420
+SPSSP YSP+SP+YSPTSPSYSPTSP YSP+SP YSPSSP + +SP Y+P SS
Sbjct: 1716 YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSS 1775
Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTPK----TNDNKDDPGT 309
PQ+SP S YSP+ P Y+PSS QY+P T + PGT
Sbjct: 1776 PQYSPTSPTYSPTSPSYTPSS-PQYSPTSPTYTPSPSEQPGT 1816
Score = 103 bits (256), Expect = 1e-20
Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 8/89 (8%)
Frame = -2
Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
++P+SP YSPTSP+YSPTSPSY+P+SP YSP+SPTY+PS GTS YSP+S
Sbjct: 1765 YNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTS 1824
Query: 419 PQFSPST-GYSPSQPGYSPSSTSQYTPKT 336
P +SPS+ YSP+ P YSPSS + Y P +
Sbjct: 1825 PTYSPSSPTYSPASPSYSPSSPT-YDPNS 1852
Score = 101 bits (251), Expect = 5e-20
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 21/102 (20%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSY------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
+SP+SP YSPTSPSY SP+SP YSP+SP+YSP+SP+YSP+SP S TSP YSPSS
Sbjct: 1696 YSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSS 1755
Query: 419 PQFSPST--------------GYSPSQPGYSPSSTSQYTPKT 336
P ++PS+ YSP+ P YSP+S S YTP +
Sbjct: 1756 PTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPS-YTPSS 1796
Score = 69.3 bits (168), Expect = 2e-10
Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSP-TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
++SP+SP SPS P TS YSPTSP+YSPSSPTYSP+SP S +SP Y P+S
Sbjct: 1798 QYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPTYSPASPSYSPSSPTYDPNS 1852
Score = 67.0 bits (162), Expect = 1e-09
Identities = 45/98 (45%), Positives = 56/98 (57%), Gaps = 20/98 (20%)
Frame = -2
Query: 575 SPSSPYSPT-------SP----SYSPTSP-----SYSPTSPSYSPSSP-TYSPSSPYNSG 447
SP + +SP SP +SP SP + SP +PSY SP YSPSSP S
Sbjct: 1525 SPGAGFSPAGNTDGGASPFNEGGWSPASPGDPLGALSPRTPSYGGMSPGVYSPSSPQFSM 1584
Query: 446 TSPDYSPSSPQFSPST---GYSPSQPGYSPSSTSQYTP 342
TSP YSP+SP +SP++ G SP P YSP+S S Y+P
Sbjct: 1585 TSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPS-YSP 1621
[105][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
briggsae RepID=RPB1_CAEBR
Length = 1853
Score = 116 bits (290), Expect = 1e-24
Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP++SP
Sbjct: 1623 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPT 1682
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1683 SPTYSPTSPTYSPTSPT-YSP 1702
Score = 115 bits (288), Expect = 2e-24
Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS
Sbjct: 1616 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1675
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
+ YSP+ P YSP+S + Y+P
Sbjct: 1676 SPRYSPTSPTYSPTSPT-YSP 1695
Score = 115 bits (288), Expect = 2e-24
Identities = 60/91 (65%), Positives = 69/91 (75%), Gaps = 12/91 (13%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP YSP+SP S TSP YSP+SP +SP+
Sbjct: 1644 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPT 1703
Query: 401 T-----------GYSPSQPGYSPSSTSQYTP 342
+ GYSPS P YSPSS + Y+P
Sbjct: 1704 SPTYSPTSPSYEGYSPSSPKYSPSSPT-YSP 1733
Score = 114 bits (285), Expect = 5e-24
Identities = 58/80 (72%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SP SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1610 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1669
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSPS P YSP+S + Y+P
Sbjct: 1670 PSYSPSSPRYSPTSPT-YSP 1688
Score = 110 bits (274), Expect = 1e-22
Identities = 57/87 (65%), Positives = 70/87 (80%), Gaps = 5/87 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT---YSPSSPYNSGTSPDYSPSSPQ 414
R+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP+ YSPSSP S +SP YSP+SP
Sbjct: 1678 RYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPS 1737
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKT 336
+SP S YSP+ P YSPSS + YTP +
Sbjct: 1738 YSPTSPQYSPTSPQYSPSSPT-YTPSS 1763
Score = 109 bits (273), Expect = 1e-22
Identities = 56/84 (66%), Positives = 69/84 (82%), Gaps = 5/84 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD---YSPSSPQF 411
+SP+SP YSP+SP YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSPSSP++
Sbjct: 1665 YSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKY 1724
Query: 410 SPST-GYSPSQPGYSPSSTSQYTP 342
SPS+ YSP+ P YSP+S QY+P
Sbjct: 1725 SPSSPTYSPTSPSYSPTS-PQYSP 1747
Score = 109 bits (273), Expect = 1e-22
Identities = 57/89 (64%), Positives = 70/89 (78%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
+SP+SP YSPTSP+YSPTSPSY SP+SP YSPSSPTYSP+SP S TSP YSP+SPQ+
Sbjct: 1693 YSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQY 1752
Query: 410 SPST-GYSPSQPGYSPS-----STSQYTP 342
SPS+ Y+PS P Y+P+ S+ QY+P
Sbjct: 1753 SPSSPTYTPSSPTYNPTSPRAFSSPQYSP 1781
Score = 109 bits (273), Expect = 1e-22
Identities = 61/102 (59%), Positives = 72/102 (70%), Gaps = 12/102 (11%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP------SS 420
+SPSSP YSP+SP+YSPTSPSYSPTSP YSP+SP YSPSSP + +SP Y+P SS
Sbjct: 1717 YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSS 1776
Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTPK----TNDNKDDPGT 309
PQ+SP S YSP+ P Y+PSS QY+P T D PGT
Sbjct: 1777 PQYSPTSPTYSPTSPSYTPSS-PQYSPTSPTYTPSPADQPGT 1817
Score = 107 bits (267), Expect = 7e-22
Identities = 55/86 (63%), Positives = 68/86 (79%), Gaps = 5/86 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSY---SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
+SP+SP YSPTSP++ SP SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +
Sbjct: 1592 YSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1651
Query: 410 SP-STGYSPSQPGYSPSSTSQYTPKT 336
SP S YSP+ P YSP+S S Y+P +
Sbjct: 1652 SPTSPSYSPTSPSYSPTSPS-YSPSS 1676
Score = 105 bits (263), Expect = 2e-21
Identities = 63/116 (54%), Positives = 70/116 (60%), Gaps = 36/116 (31%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YN--------------- 453
++SPSSP YSPTSPSYSPTSP YSPTSP YSPSSPTY+PSSP YN
Sbjct: 1723 KYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSPT 1782
Query: 452 ----SGTSPDYSPSSPQFSP---------------STGYSPSQPGYSPSSTSQYTP 342
S TSP Y+PSSPQ+SP S YSPS P YSPSS + Y+P
Sbjct: 1783 SPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPT-YSP 1837
Score = 103 bits (257), Expect = 1e-20
Identities = 52/88 (59%), Positives = 65/88 (73%), Gaps = 8/88 (9%)
Frame = -2
Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
++P+SP YSPTSP+YSPTSPSY+P+SP YSP+SPTY+PS GTS YSPSS
Sbjct: 1766 YNPTSPRAFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSS 1825
Query: 419 PQFSPST-GYSPSQPGYSPSSTSQYTPK 339
P +SPS+ YSP+ P YSPSS + Y P+
Sbjct: 1826 PTYSPSSPTYSPASPSYSPSSPT-YDPQ 1852
Score = 102 bits (254), Expect = 2e-20
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 12/91 (13%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPT----------SPSYSPSSPTYSPSSPYNSGTSPDY 432
+SP+SP +S TSP YSPTSPSYSPT SPSYSP+SP+YSP+SP S TSP Y
Sbjct: 1578 YSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSY 1637
Query: 431 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP+SP +SP S YSP+ P YSP+S S Y+P
Sbjct: 1638 SPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1667
Score = 72.4 bits (176), Expect = 2e-11
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 8/61 (13%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
++PSSP YSPTSP+Y+P TS YSP+SP+YSPSSPTYSP+SP S +SP Y P
Sbjct: 1793 YTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPTYSPASPSYSPSSPTYDPQ 1852
Query: 422 S 420
+
Sbjct: 1853 N 1853
Score = 65.1 bits (157), Expect = 4e-09
Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 21/99 (21%)
Frame = -2
Query: 575 SPSSPYSPT-------SP----SYSPTSP-----SYSPTSPSYSPSSP-TYSPSSPYNSG 447
SPS+ +SP SP +SP SP + SP +P+Y SP YSP+SP S
Sbjct: 1528 SPSAGFSPAGNLDGGASPFNEGGWSPASPGDPLGALSPRTPAYGGMSPGVYSPASPGFSM 1587
Query: 446 TSPDYSPSSPQFSPST----GYSPSQPGYSPSSTSQYTP 342
TSP YSP+SP +SP++ G SP P YSP+S S Y+P
Sbjct: 1588 TSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPS-YSP 1625
[106][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
Length = 2085
Score = 115 bits (289), Expect = 2e-24
Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TS YSP+SP +S
Sbjct: 1692 YSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYS 1751
Query: 407 P-STGYSPSQPGYSPSSTS------QYTP 342
P S GYSP+ P YSPSS S +YTP
Sbjct: 1752 PTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1780
Score = 111 bits (278), Expect = 4e-23
Identities = 58/85 (68%), Positives = 69/85 (81%), Gaps = 4/85 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP YSPTSPSY SPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+S +S
Sbjct: 1685 YSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYS 1744
Query: 407 P-STGYSPSQPGYSPSSTSQYTPKT 336
P S YSP+ PGYSP+S S Y+P +
Sbjct: 1745 PTSPAYSPTSPGYSPTSPS-YSPSS 1768
Score = 109 bits (273), Expect = 1e-22
Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTS +YSP+SP YSP+SP S TSP YSPSSP ++PS
Sbjct: 1715 YSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPS 1774
Query: 401 T-------GYSPSQPGYSPSSTSQYTP 342
+ YSPS P Y S++ Y+P
Sbjct: 1775 SVKYTPSHAYSPSSPNYYSSTSPTYSP 1801
Score = 106 bits (265), Expect = 1e-21
Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 5/83 (6%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYS--PTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFS 408
SPS YSPTSPSYSPTSPSYS PTSPSYSP+SP+Y SP+SP S TSP YSP+SP +S
Sbjct: 1664 SPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYS 1723
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S S Y+P
Sbjct: 1724 PTSPSYSPTSPSYSPTS-SAYSP 1745
Score = 97.4 bits (241), Expect = 7e-19
Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP--DYSPSSPQ 414
+SP+SP YSPTSP Y+PTS +YSPTSPSY+P+SP +YSP+SP S TSP YSP+SP
Sbjct: 1632 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPS 1691
Query: 413 F---SPSTGYSPSQPGYSPSSTSQYTP 342
+ SPS YSP+ P YSP+S S Y+P
Sbjct: 1692 YSPTSPSYNYSPTSPSYSPTSPS-YSP 1717
Score = 97.4 bits (241), Expect = 7e-19
Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 22/104 (21%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSP----------------- 459
+SP+SP Y+PTS +YSPTSPSY+PTSP SYSP+SP+YSP+SP
Sbjct: 1639 YSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPS 1698
Query: 458 YN-SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTN 333
YN S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P ++
Sbjct: 1699 YNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1741
Score = 94.4 bits (233), Expect = 6e-18
Identities = 53/88 (60%), Positives = 63/88 (71%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGT-----SPDYSPSS 420
+SP+SP YSPTS +YSPTSP+YSPTSP YSP+SP+YSPSSP YN + S YSPSS
Sbjct: 1729 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSS 1788
Query: 419 PQFSPSTG--YSPSQPGYSPSSTSQYTP 342
P + ST YSP+ P YS S S Y+P
Sbjct: 1789 PNYYSSTSPTYSPTSPSYSQPSPS-YSP 1815
Score = 94.0 bits (232), Expect = 8e-18
Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 14/93 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411
+S +SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S TSP Y+P+SP +
Sbjct: 1611 YSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYS 1670
Query: 410 ---------SPSTGYSPSQPGYSPSSTS-QYTP 342
SPS YSP+ P YSP+S S Y+P
Sbjct: 1671 PTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1703
Score = 93.2 bits (230), Expect = 1e-17
Identities = 50/85 (58%), Positives = 59/85 (69%), Gaps = 8/85 (9%)
Frame = -2
Query: 572 PSSPYSP----TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-- 411
P SP SP TSP YSP+SP YSPTS SYSP+SP YSP+SP + TS YSP+SP +
Sbjct: 1603 PHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNP 1662
Query: 410 -SPSTGYSPSQPGYSPSSTS-QYTP 342
SPS YSP+ P YSP+S S Y+P
Sbjct: 1663 TSPSYSYSPTSPSYSPTSPSYSYSP 1687
Score = 90.9 bits (224), Expect = 7e-17
Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 9/75 (12%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPS------SPTYSPSSP-YNSGTSPDYSPS 423
+SP+SP YSPTSP YSPTSPSYSP+SPSY+PS S YSPSSP Y S TSP YSP+
Sbjct: 1743 YSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPT 1802
Query: 422 SPQFS-PSTGYSPSQ 381
SP +S PS YSP++
Sbjct: 1803 SPSYSQPSPSYSPTR 1817
Score = 89.7 bits (221), Expect = 1e-16
Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
+SP+SP Y PTS +SPTSP YS TSP YSPSSP YSP+S S TSP YSP
Sbjct: 1582 YSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSP 1641
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTS-QYTP 342
+SP ++P S+ YSP+ P Y+P+S S Y+P
Sbjct: 1642 TSPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1671
Score = 85.5 bits (210), Expect = 3e-15
Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSP-TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F+ SSPY+P SP YSP SP P TSPSY P+S +SP+SP S TSP YSPSSP +SP
Sbjct: 1569 FTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPT 1628
Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y+P+S S Y+P
Sbjct: 1629 SLSYSPTSPVYSPTSPVYNPTS-SAYSP 1655
Score = 69.7 bits (169), Expect = 2e-10
Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 2/63 (3%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQFSP 405
+SP+SP YSP+SPSY+P+S Y+P S +YSPSSP YS +SP S TSP YS SP +SP
Sbjct: 1757 YSPTSPSYSPSSPSYNPSSVKYTP-SHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSP 1815
Query: 404 STG 396
+ G
Sbjct: 1816 TRG 1818
Score = 58.2 bits (139), Expect = 5e-07
Identities = 26/40 (65%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = -2
Query: 581 RFSPSSPYSPTSPS-YSPTSPSYSPTSPSYSPSSPTYSPS 465
+++PS YSP+SP+ YS TSP+YSPTSPSYS SP+YSP+
Sbjct: 1777 KYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSPT 1816
[107][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q5WMZ9_ORYSJ
Length = 1741
Score = 115 bits (289), Expect = 2e-24
Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TS YSP+SP +S
Sbjct: 1639 YSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYS 1698
Query: 407 P-STGYSPSQPGYSPSSTS------QYTP 342
P S GYSP+ P YSPSS S +YTP
Sbjct: 1699 PTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1727
Score = 111 bits (278), Expect = 4e-23
Identities = 58/85 (68%), Positives = 69/85 (81%), Gaps = 4/85 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP YSPTSPSY SPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+S +S
Sbjct: 1632 YSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYS 1691
Query: 407 P-STGYSPSQPGYSPSSTSQYTPKT 336
P S YSP+ PGYSP+S S Y+P +
Sbjct: 1692 PTSPAYSPTSPGYSPTSPS-YSPSS 1715
Score = 106 bits (265), Expect = 1e-21
Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 5/83 (6%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYS--PTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFS 408
SPS YSPTSPSYSPTSPSYS PTSPSYSP+SP+Y SP+SP S TSP YSP+SP +S
Sbjct: 1611 SPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYS 1670
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S S Y+P
Sbjct: 1671 PTSPSYSPTSPSYSPTS-SAYSP 1692
Score = 106 bits (264), Expect = 1e-21
Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTS +YSP+SP YSP+SP S TSP YSPSSP ++PS
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPS 1721
Query: 401 T-GYSPSQPGYSPSSTSQY 348
+ Y+PS YSPSS + Y
Sbjct: 1722 SVKYTPSH-AYSPSSPNYY 1739
Score = 97.4 bits (241), Expect = 7e-19
Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP--DYSPSSPQ 414
+SP+SP YSPTSP Y+PTS +YSPTSPSY+P+SP +YSP+SP S TSP YSP+SP
Sbjct: 1579 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPS 1638
Query: 413 F---SPSTGYSPSQPGYSPSSTSQYTP 342
+ SPS YSP+ P YSP+S S Y+P
Sbjct: 1639 YSPTSPSYNYSPTSPSYSPTSPS-YSP 1664
Score = 97.4 bits (241), Expect = 7e-19
Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 22/104 (21%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSP----------------- 459
+SP+SP Y+PTS +YSPTSPSY+PTSP SYSP+SP+YSP+SP
Sbjct: 1586 YSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPS 1645
Query: 458 YN-SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTN 333
YN S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P ++
Sbjct: 1646 YNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1688
Score = 94.0 bits (232), Expect = 8e-18
Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 14/93 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411
+S +SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S TSP Y+P+SP +
Sbjct: 1558 YSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYS 1617
Query: 410 ---------SPSTGYSPSQPGYSPSSTS-QYTP 342
SPS YSP+ P YSP+S S Y+P
Sbjct: 1618 PTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1650
Score = 93.2 bits (230), Expect = 1e-17
Identities = 50/85 (58%), Positives = 59/85 (69%), Gaps = 8/85 (9%)
Frame = -2
Query: 572 PSSPYSP----TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-- 411
P SP SP TSP YSP+SP YSPTS SYSP+SP YSP+SP + TS YSP+SP +
Sbjct: 1550 PHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNP 1609
Query: 410 -SPSTGYSPSQPGYSPSSTS-QYTP 342
SPS YSP+ P YSP+S S Y+P
Sbjct: 1610 TSPSYSYSPTSPSYSPTSPSYSYSP 1634
Score = 89.7 bits (221), Expect = 1e-16
Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
+SP+SP Y PTS +SPTSP YS TSP YSPSSP YSP+S S TSP YSP
Sbjct: 1529 YSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSP 1588
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTS-QYTP 342
+SP ++P S+ YSP+ P Y+P+S S Y+P
Sbjct: 1589 TSPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1618
Score = 85.5 bits (210), Expect = 3e-15
Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSP-TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F+ SSPY+P SP YSP SP P TSPSY P+S +SP+SP S TSP YSPSSP +SP
Sbjct: 1516 FTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPT 1575
Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y+P+S S Y+P
Sbjct: 1576 SLSYSPTSPVYSPTSPVYNPTS-SAYSP 1602
[108][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DKN9_ORYSJ
Length = 1834
Score = 115 bits (289), Expect = 2e-24
Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TS YSP+SP +S
Sbjct: 1692 YSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYS 1751
Query: 407 P-STGYSPSQPGYSPSSTS------QYTP 342
P S GYSP+ P YSPSS S +YTP
Sbjct: 1752 PTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1780
Score = 111 bits (278), Expect = 4e-23
Identities = 58/85 (68%), Positives = 69/85 (81%), Gaps = 4/85 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP YSPTSPSY SPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+S +S
Sbjct: 1685 YSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYS 1744
Query: 407 P-STGYSPSQPGYSPSSTSQYTPKT 336
P S YSP+ PGYSP+S S Y+P +
Sbjct: 1745 PTSPAYSPTSPGYSPTSPS-YSPSS 1768
Score = 109 bits (273), Expect = 1e-22
Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPTS +YSP+SP YSP+SP S TSP YSPSSP ++PS
Sbjct: 1715 YSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPS 1774
Query: 401 T-------GYSPSQPGYSPSSTSQYTP 342
+ YSPS P Y S++ Y+P
Sbjct: 1775 SVKYTPSHAYSPSSPNYYSSTSPTYSP 1801
Score = 106 bits (265), Expect = 1e-21
Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 5/83 (6%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYS--PTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFS 408
SPS YSPTSPSYSPTSPSYS PTSPSYSP+SP+Y SP+SP S TSP YSP+SP +S
Sbjct: 1664 SPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYS 1723
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S S Y+P
Sbjct: 1724 PTSPSYSPTSPSYSPTS-SAYSP 1745
Score = 97.4 bits (241), Expect = 7e-19
Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP--DYSPSSPQ 414
+SP+SP YSPTSP Y+PTS +YSPTSPSY+P+SP +YSP+SP S TSP YSP+SP
Sbjct: 1632 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPS 1691
Query: 413 F---SPSTGYSPSQPGYSPSSTSQYTP 342
+ SPS YSP+ P YSP+S S Y+P
Sbjct: 1692 YSPTSPSYNYSPTSPSYSPTSPS-YSP 1717
Score = 97.4 bits (241), Expect = 7e-19
Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 22/104 (21%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSP----------------- 459
+SP+SP Y+PTS +YSPTSPSY+PTSP SYSP+SP+YSP+SP
Sbjct: 1639 YSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPS 1698
Query: 458 YN-SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTN 333
YN S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P ++
Sbjct: 1699 YNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1741
Score = 94.0 bits (232), Expect = 8e-18
Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 14/93 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411
+S +SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S TSP Y+P+SP +
Sbjct: 1611 YSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYS 1670
Query: 410 ---------SPSTGYSPSQPGYSPSSTS-QYTP 342
SPS YSP+ P YSP+S S Y+P
Sbjct: 1671 PTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1703
Score = 93.2 bits (230), Expect = 1e-17
Identities = 50/85 (58%), Positives = 59/85 (69%), Gaps = 8/85 (9%)
Frame = -2
Query: 572 PSSPYSP----TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-- 411
P SP SP TSP YSP+SP YSPTS SYSP+SP YSP+SP + TS YSP+SP +
Sbjct: 1603 PHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNP 1662
Query: 410 -SPSTGYSPSQPGYSPSSTS-QYTP 342
SPS YSP+ P YSP+S S Y+P
Sbjct: 1663 TSPSYSYSPTSPSYSPTSPSYSYSP 1687
Score = 92.0 bits (227), Expect = 3e-17
Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSPSYSP+SPSY+PSS Y+PS Y+ + YS +SP +SP
Sbjct: 1743 YSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPT 1802
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YS P YSP+S + +++P
Sbjct: 1803 SPSYSQPSPSYSPTSRVEEEAHEEAEEEEP 1832
Score = 89.7 bits (221), Expect = 1e-16
Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
+SP+SP Y PTS +SPTSP YS TSP YSPSSP YSP+S S TSP YSP
Sbjct: 1582 YSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSP 1641
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTS-QYTP 342
+SP ++P S+ YSP+ P Y+P+S S Y+P
Sbjct: 1642 TSPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1671
Score = 85.5 bits (210), Expect = 3e-15
Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSP-TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F+ SSPY+P SP YSP SP P TSPSY P+S +SP+SP S TSP YSPSSP +SP
Sbjct: 1569 FTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPT 1628
Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y+P+S S Y+P
Sbjct: 1629 SLSYSPTSPVYSPTSPVYNPTS-SAYSP 1655
Score = 59.7 bits (143), Expect = 2e-07
Identities = 27/41 (65%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Frame = -2
Query: 581 RFSPSSPYSPTSPS-YSPTSPSYSPTSPSYSPSSPTYSPSS 462
+++PS YSP+SP+ YS TSP+YSPTSPSYS SP+YSP+S
Sbjct: 1777 KYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSPTS 1817
[109][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 115 bits (289), Expect = 2e-24
Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSY+PTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1592 YSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y P
Sbjct: 1652 SPSYSPTSPAYSPTSPS-YAP 1671
Score = 115 bits (288), Expect = 2e-24
Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+Y+P+SP S TSP YSP+SP +SP
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPT 1693
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSPS P YSP+S S Y+P
Sbjct: 1694 SPSYSPSSPSYSPTSPS-YSP 1713
Score = 114 bits (286), Expect = 4e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+Y+P+SP S TSP YSP+SP +SP
Sbjct: 1578 YSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1638 SPSYSPTSPSYSPTSPS-YSP 1657
Score = 114 bits (285), Expect = 5e-24
Identities = 55/91 (60%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSY+PTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1599 YSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
S YSP+ P Y+P+S + + + PG
Sbjct: 1659 SPAYSPTSPSYAPTSPAYSPTSPSYSPTSPG 1689
Score = 114 bits (284), Expect = 7e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSP+YSPTSPSY+P+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPS 1700
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
+ YSP+ P YSP+S + Y+P
Sbjct: 1701 SPSYSPTSPSYSPTSPA-YSP 1720
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSPSYSPTSPSY+P+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1585 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1645 SPSYSPTSPSYSPTSPA-YSP 1664
Score = 113 bits (283), Expect = 9e-24
Identities = 55/77 (71%), Positives = 64/77 (83%), Gaps = 2/77 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP Y+PTSP+YSPTSPSYSPTSP YSP+SP+YSPSSP S TSP YSP+SP +SP
Sbjct: 1662 YSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPT 1721
Query: 404 STGYSPSQPGYSPSSTS 354
S YSPS P YSP+S S
Sbjct: 1722 SPRYSPSSPSYSPTSPS 1738
Score = 113 bits (282), Expect = 1e-23
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP + TSP YSP+SP +SP
Sbjct: 1571 YSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPT 1630
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650
Score = 112 bits (279), Expect = 3e-23
Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S TSP Y+P+SP +SP
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPT 1623
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1624 SPSYSPTSPSYSPTSPS-YSP 1643
Score = 111 bits (277), Expect = 5e-23
Identities = 56/81 (69%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSPSSP YSP+SP YSP SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1536 FSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPT 1595
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S GYSP+ P YSP+S S Y P
Sbjct: 1596 SPGYSPTSPSYSPTSPS-YAP 1615
Score = 108 bits (271), Expect = 2e-22
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1550 YSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPT 1609
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1610 SPSYAPTSPSYSPTSPS-YSP 1629
Score = 108 bits (269), Expect = 4e-22
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSP SP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1543 YSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPT 1602
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y+P+S S Y+P
Sbjct: 1603 SPSYSPTSPSYAPTSPS-YSP 1622
Score = 107 bits (268), Expect = 5e-22
Identities = 51/71 (71%), Positives = 61/71 (85%), Gaps = 2/71 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
++P+SP YSPTSPSYSPTSP YSPTSPSYSPSSP+YSP+SP S TSP YSP+SP++SPS
Sbjct: 1669 YAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPS 1728
Query: 401 T-GYSPSQPGY 372
+ YSP+ P Y
Sbjct: 1729 SPSYSPTSPSY 1739
Score = 104 bits (259), Expect = 6e-21
Identities = 52/84 (61%), Positives = 64/84 (76%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSP---SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
+FSP + P+SP+SP YSP+SP YSP SP YSP+SP YSP+SP S TSP YSP+SP +
Sbjct: 1526 QFSPYVGNMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGY 1585
Query: 410 SP-STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ PGYSP+S S Y+P
Sbjct: 1586 SPTSPSYSPTSPGYSPTSPS-YSP 1608
Score = 92.0 bits (227), Expect = 3e-17
Identities = 47/66 (71%), Positives = 53/66 (80%), Gaps = 4/66 (6%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP---QF 411
+SP+SP YSPTSP YSPTSPSYSP+SPSYSP+SP+YSP+SP S TSP YSPSSP
Sbjct: 1676 YSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPT 1735
Query: 410 SPSTGY 393
SPS Y
Sbjct: 1736 SPSYRY 1741
Score = 83.2 bits (204), Expect = 1e-14
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
Frame = -2
Query: 575 SPSSPYSPTSPS-YSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
SPS SP S + +SP + +SP+SP YSPSSP YSP SP S TSP YSP+SP +SP
Sbjct: 1514 SPSLRASPLSDAQFSPYVGNMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSP 1573
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S GYSP+ PGYSP+S S Y+P
Sbjct: 1574 TSPGYSPTSPGYSPTSPS-YSP 1594
[110][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 115 bits (288), Expect = 2e-24
Identities = 59/93 (63%), Positives = 70/93 (75%), Gaps = 12/93 (12%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SPS
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPS 1665
Query: 401 T-----------GYSPSQPGYSPSSTSQYTPKT 336
+ YSPS P YSPSS QY+P +
Sbjct: 1666 SPAMSPARAGGVSYSPSSPHYSPSS-PQYSPSS 1697
Score = 109 bits (273), Expect = 1e-22
Identities = 59/93 (63%), Positives = 70/93 (75%), Gaps = 12/93 (12%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP----------YNSGTSPDY 432
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSPSSP S +SP Y
Sbjct: 1627 YSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHY 1686
Query: 431 SPSSPQFSPST-GYSPSQPGYSPSSTSQYTPKT 336
SPSSPQ+SPS+ YSPS P YSPSS QY+P +
Sbjct: 1687 SPSSPQYSPSSPHYSPSSPHYSPSS-PQYSPSS 1718
Score = 109 bits (272), Expect = 2e-22
Identities = 56/81 (69%), Positives = 62/81 (76%), Gaps = 9/81 (11%)
Frame = -2
Query: 575 SPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+S
Sbjct: 1586 SPSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTS 1645
Query: 419 PQFSP-STGYSPSQPGYSPSS 360
P +SP S YSP+ P YSPSS
Sbjct: 1646 PTYSPTSPTYSPTSPMYSPSS 1666
Score = 106 bits (264), Expect = 1e-21
Identities = 58/93 (62%), Positives = 68/93 (73%), Gaps = 12/93 (12%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSP----------SYSPSSPTYSPSSPYNSGTSPDY 432
+SP+SP YSPTSP+YSPTSP YSP+SP SYSPSSP YSPSSP S +SP Y
Sbjct: 1641 YSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHY 1700
Query: 431 SPSSPQFSPST-GYSPSQPGYSPSSTSQYTPKT 336
SPSSP +SPS+ YSPS P YSPSS + Y+P +
Sbjct: 1701 SPSSPHYSPSSPQYSPSSPQYSPSSPA-YSPSS 1732
Score = 106 bits (264), Expect = 1e-21
Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 12/85 (14%)
Frame = -2
Query: 578 FSPSSP-YSPTSP----------SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
+SP+SP YSP+SP SYSP+SP YSP+SP YSPSSP YSPSSP+ S +SP Y
Sbjct: 1655 YSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQY 1714
Query: 431 SPSSPQFSPST-GYSPSQPGYSPSS 360
SPSSPQ+SPS+ YSPS P YSPSS
Sbjct: 1715 SPSSPQYSPSSPAYSPSSPAYSPSS 1739
Score = 95.5 bits (236), Expect = 3e-18
Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SPSSP YSP+SP YSP+SP YSP+SP YSPSSP YSPSSP S +SP YSPSSP +SPS
Sbjct: 1679 YSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPS 1738
Query: 401 TGYSPS 384
+ PS
Sbjct: 1739 SPAHPS 1744
Score = 92.0 bits (227), Expect = 3e-17
Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390
SP SP+SP SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YS
Sbjct: 1583 SPRSPSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYS 1642
Query: 389 PSQPGYSPSSTSQYTP 342
P+ P YSP+S + Y+P
Sbjct: 1643 PTSPTYSPTSPT-YSP 1657
Score = 72.8 bits (177), Expect = 2e-11
Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT 444
+SPSSP YSP+SP YSP+SP YSP+SP+YSPSSP YSPSSP + T
Sbjct: 1700 YSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPSSPAHPST 1745
Score = 71.6 bits (174), Expect = 4e-11
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Frame = -2
Query: 569 SSPYSPTSPSY----SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPYS ++ SP+SP SP YSP+SPTYSP TSP YSP+SP +SP
Sbjct: 1571 ASPYSRAGNAFYSPRSPSSPGGVAASPGYSPTSPTYSP-------TSPSYSPTSPSYSPT 1623
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1624 SPAYSPTSPAYSPTSPT-YSP 1643
Score = 62.0 bits (149), Expect = 3e-08
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 25/105 (23%)
Frame = -2
Query: 581 RFSP--SSPYSPTSPSYSPTSPSY--------SPTSPSYSPSSPT----YSPSSPYNSG- 447
+FSP +SPY + S +PTSP+Y SP + SP S YSP SP + G
Sbjct: 1533 QFSPFAASPYGDAAFSPTPTSPAYASPYGTAASPFNAMASPYSRAGNAFYSPRSPSSPGG 1592
Query: 446 ---------TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
TSP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1593 VAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPA-YSP 1636
[111][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S3M0_OSTLU
Length = 1646
Score = 115 bits (287), Expect = 3e-24
Identities = 55/89 (61%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1558 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1617
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
S YSP+ P YSP+S + Y+PK + ++
Sbjct: 1618 SPAYSPTSPAYSPTSPA-YSPKEEEENEE 1645
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1523 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1582
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1583 SPAYSPTSPAYSPTSPA-YSP 1602
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1544 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1603
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1604 SPAYSPTSPAYSPTSPA-YSP 1623
[112][TOP]
>UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q5I6_MALGO
Length = 1607
Score = 115 bits (287), Expect = 3e-24
Identities = 57/85 (67%), Positives = 67/85 (78%), Gaps = 2/85 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1499 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1558
Query: 404 -STGYSPSQPGYSPSSTSQYTPKTN 333
S YSP+ P YSP+S QY+P N
Sbjct: 1559 TSPQYSPTSPQYSPTS-PQYSPSGN 1582
Score = 114 bits (284), Expect = 7e-24
Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1478 KYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1537
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1538 TSPQYSPTSPQYSPTS-PQYSP 1558
Score = 104 bits (259), Expect = 6e-21
Identities = 56/94 (59%), Positives = 66/94 (70%), Gaps = 15/94 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPS-------------YSPTSPSYSPSSPTYSPSSPYNSGTS 441
+SP+SP YSPTSP YSPTSP+ YSPTSP YSP+SP YSP+SP S TS
Sbjct: 1445 YSPTSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTS 1504
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1505 PQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1537
Score = 104 bits (259), Expect = 6e-21
Identities = 56/94 (59%), Positives = 66/94 (70%), Gaps = 15/94 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
+SP+SP YSPTSP+ YSPTSP YSPTSP YSP+SP YSP+SP S TS
Sbjct: 1452 YSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1511
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1512 PQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1544
Score = 99.4 bits (246), Expect = 2e-19
Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1520 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1579
Query: 404 S--TGYSPSQPGYSP 366
S G S + SP
Sbjct: 1580 SGNVGASAASGAASP 1594
Score = 95.5 bits (236), Expect = 3e-18
Identities = 55/107 (51%), Positives = 65/107 (60%), Gaps = 28/107 (26%)
Frame = -2
Query: 578 FSPSSPY--------------SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN---- 453
+SPSSP SP SP+YSPTSP YSPTSP+YSP+SP YSP+SP
Sbjct: 1411 YSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYSPTSPAGPRGR 1470
Query: 452 ---------SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SPQ+SP S YSP+ P YSP+S QY+P
Sbjct: 1471 RLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1516
Score = 84.7 bits (208), Expect = 5e-15
Identities = 53/116 (45%), Positives = 65/116 (56%), Gaps = 37/116 (31%)
Frame = -2
Query: 578 FSPSSP----------YSPTSPSYSPTSP-------------SYSPTSPSYSPSSPTYSP 468
+SP+SP YSPTSPSYSP+SP SP SP+YSP+SP YSP
Sbjct: 1388 YSPTSPRIFAGATSPSYSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSP 1447
Query: 467 SSPYNSGTSPDYSPSS-------------PQFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S TSP YSP+S P++SP S YSP+ P YSP+S QY+P
Sbjct: 1448 TSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTS-PQYSP 1502
Score = 72.8 bits (177), Expect = 2e-11
Identities = 46/119 (38%), Positives = 57/119 (47%), Gaps = 47/119 (39%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYS---------------------------------PTSPSY 495
SP ++PTSP Y PTSP+Y+ TSPSY
Sbjct: 1345 SPGYGFAPTSPGYVPTSPAYNATSPALGAMSPWVGAAGATSPAYSPTSPRIFAGATSPSY 1404
Query: 494 SPSSPTYSPSSPY-------------NSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
SP+SP+YSPSSP S SP+YSP+SP +SP S YSP+ P YSP+S
Sbjct: 1405 SPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYSPTS 1463
[113][TOP]
>UniRef100_Q5CUJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cryptosporidium parvum
Iowa II RepID=Q5CUJ2_CRYPV
Length = 1902
Score = 114 bits (286), Expect = 4e-24
Identities = 55/94 (58%), Positives = 72/94 (76%), Gaps = 5/94 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP YSPTSP YSPTSP YSPSSP YSP+SP S TSP+Y+P+SP +SP+
Sbjct: 1766 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPT 1825
Query: 401 TGYSPSQPGYSPSSTSQYTPKT----NDNKDDPG 312
+ YSP+ P Y+P+S + Y+P + ++N PG
Sbjct: 1826 SHYSPTSPNYNPTSPN-YSPSSPNYISNNSGSPG 1858
Score = 112 bits (279), Expect = 3e-23
Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP
Sbjct: 1731 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1790
Query: 404 STGYSPSQPGYSPSSTSQYTPKT-NDNKDDP 315
S YSPS P YSP+S QY+P + N N P
Sbjct: 1791 SPHYSPSSPHYSPTS-PQYSPTSPNYNPASP 1820
Score = 108 bits (271), Expect = 2e-22
Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP
Sbjct: 1717 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1776
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP+S Y+P +
Sbjct: 1777 SPHYSPTSPHYSPTS-PHYSPSS 1798
Score = 108 bits (270), Expect = 3e-22
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP
Sbjct: 1689 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1748
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S Y+P
Sbjct: 1749 SPHYSPTSPHYSPTS-PHYSP 1768
Score = 108 bits (270), Expect = 3e-22
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP
Sbjct: 1696 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1755
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S Y+P
Sbjct: 1756 SPHYSPTSPHYSPTS-PHYSP 1775
Score = 108 bits (270), Expect = 3e-22
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP
Sbjct: 1703 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1762
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S Y+P
Sbjct: 1763 SPHYSPTSPHYSPTS-PHYSP 1782
Score = 108 bits (270), Expect = 3e-22
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP
Sbjct: 1710 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1769
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S Y+P
Sbjct: 1770 SPHYSPTSPHYSPTS-PHYSP 1789
Score = 107 bits (267), Expect = 7e-22
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S
Sbjct: 1683 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1742
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S Y+P
Sbjct: 1743 PHYSPTSPHYSPTS-PHYSP 1761
Score = 102 bits (253), Expect = 3e-20
Identities = 54/93 (58%), Positives = 63/93 (67%), Gaps = 14/93 (15%)
Frame = -2
Query: 578 FSPSSPY-------------SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438
+SPSSP SPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP
Sbjct: 1663 YSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1722
Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1723 HYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1754
Score = 100 bits (249), Expect = 8e-20
Identities = 57/98 (58%), Positives = 69/98 (70%), Gaps = 10/98 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTSP YSPTSP YSPTSP YS P+SP YSP+SP+ S +SP YSP+
Sbjct: 1745 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPT 1804
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT-NDNKDDP 315
SPQ+SP S Y+P+ P YSP TS Y+P + N N P
Sbjct: 1805 SPQYSPTSPNYNPASPNYSP--TSHYSPTSPNYNPTSP 1840
Score = 97.8 bits (242), Expect = 5e-19
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP------YNSGTSPDYSPSS 420
+SP+SP YSPTSP YSP+SP YSPTSP YSP+SP Y+P+SP + S TSP+Y+P+S
Sbjct: 1780 YSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTS 1839
Query: 419 PQFSPST----GYSPSQPGYSPSSTSQYTP 342
P +SPS+ + PGYSPSS QY P
Sbjct: 1840 PNYSPSSPNYISNNSGSPGYSPSS-PQYDP 1868
Score = 87.8 bits (216), Expect = 6e-16
Identities = 50/101 (49%), Positives = 62/101 (61%), Gaps = 20/101 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY-------------SPTSPSYSPSSPTYSPSSP---YNS 450
+SPSSP YSPTSP YSPTSP+Y SPTSP+Y+P+SP YSPSSP N+
Sbjct: 1794 YSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPNYSPSSPNYISNN 1853
Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSS--TSQYTPKT 336
SP YSPSSPQ+ P + P P YS ++Y+P +
Sbjct: 1854 SGSPGYSPSSPQYDPIAVASVPRSPSYSVGKMVDAEYSPSS 1894
Score = 73.2 bits (178), Expect = 1e-11
Identities = 51/119 (42%), Positives = 60/119 (50%), Gaps = 39/119 (32%)
Frame = -2
Query: 581 RFSPSSPYSPTSPS-------YSPTSPS-----YSPTSPSYSPSSPT------------- 477
+ +P SP SP SP YSP SPS Y+PTSP Y+ SSPT
Sbjct: 1595 QMTPRSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKY 1654
Query: 476 --------YSPSSPYN-----SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
YSPSSP N S SPD SP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1655 KVNNTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1712
Score = 65.5 bits (158), Expect = 3e-09
Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 20/74 (27%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSP---------------YN 453
+SP+S YSPTSP+Y+PTSP+YSP+SP+Y + SP YSPSSP Y+
Sbjct: 1822 YSPTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVASVPRSPSYS 1881
Query: 452 SGTSPD--YSPSSP 417
G D YSPSSP
Sbjct: 1882 VGKMVDAEYSPSSP 1895
[114][TOP]
>UniRef100_Q5CH45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
RepID=Q5CH45_CRYHO
Length = 1895
Score = 114 bits (286), Expect = 4e-24
Identities = 55/94 (58%), Positives = 72/94 (76%), Gaps = 5/94 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP YSPTSP YSPTSP YSPSSP YSP+SP S TSP+Y+P+SP +SP+
Sbjct: 1759 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPT 1818
Query: 401 TGYSPSQPGYSPSSTSQYTPKT----NDNKDDPG 312
+ YSP+ P Y+P+S + Y+P + ++N PG
Sbjct: 1819 SHYSPTSPNYNPTSPN-YSPSSPNYISNNSGSPG 1851
Score = 112 bits (279), Expect = 3e-23
Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP
Sbjct: 1724 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1783
Query: 404 STGYSPSQPGYSPSSTSQYTPKT-NDNKDDP 315
S YSPS P YSP+S QY+P + N N P
Sbjct: 1784 SPHYSPSSPHYSPTS-PQYSPTSPNYNPASP 1813
Score = 108 bits (271), Expect = 2e-22
Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP
Sbjct: 1710 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1769
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP+S Y+P +
Sbjct: 1770 SPHYSPTSPHYSPTS-PHYSPSS 1791
Score = 108 bits (270), Expect = 3e-22
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP
Sbjct: 1682 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1741
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S Y+P
Sbjct: 1742 SPHYSPTSPHYSPTS-PHYSP 1761
Score = 108 bits (270), Expect = 3e-22
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP
Sbjct: 1689 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1748
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S Y+P
Sbjct: 1749 SPHYSPTSPHYSPTS-PHYSP 1768
Score = 108 bits (270), Expect = 3e-22
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP
Sbjct: 1696 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1755
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S Y+P
Sbjct: 1756 SPHYSPTSPHYSPTS-PHYSP 1775
Score = 108 bits (270), Expect = 3e-22
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP
Sbjct: 1703 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1762
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S Y+P
Sbjct: 1763 SPHYSPTSPHYSPTS-PHYSP 1782
Score = 107 bits (267), Expect = 7e-22
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S
Sbjct: 1676 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1735
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S Y+P
Sbjct: 1736 PHYSPTSPHYSPTS-PHYSP 1754
Score = 102 bits (253), Expect = 3e-20
Identities = 54/93 (58%), Positives = 63/93 (67%), Gaps = 14/93 (15%)
Frame = -2
Query: 578 FSPSSPY-------------SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438
+SPSSP SPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP
Sbjct: 1656 YSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1715
Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1716 HYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1747
Score = 100 bits (249), Expect = 8e-20
Identities = 57/98 (58%), Positives = 69/98 (70%), Gaps = 10/98 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTSP YSPTSP YSPTSP YS P+SP YSP+SP+ S +SP YSP+
Sbjct: 1738 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPT 1797
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT-NDNKDDP 315
SPQ+SP S Y+P+ P YSP TS Y+P + N N P
Sbjct: 1798 SPQYSPTSPNYNPASPNYSP--TSHYSPTSPNYNPTSP 1833
Score = 97.8 bits (242), Expect = 5e-19
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP------YNSGTSPDYSPSS 420
+SP+SP YSPTSP YSP+SP YSPTSP YSP+SP Y+P+SP + S TSP+Y+P+S
Sbjct: 1773 YSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTS 1832
Query: 419 PQFSPST----GYSPSQPGYSPSSTSQYTP 342
P +SPS+ + PGYSPSS QY P
Sbjct: 1833 PNYSPSSPNYISNNSGSPGYSPSS-PQYDP 1861
Score = 87.8 bits (216), Expect = 6e-16
Identities = 51/101 (50%), Positives = 62/101 (61%), Gaps = 20/101 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY-------------SPTSPSYSPSSPTYSPSSP---YNS 450
+SPSSP YSPTSP YSPTSP+Y SPTSP+Y+P+SP YSPSSP N+
Sbjct: 1787 YSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPNYSPSSPNYISNN 1846
Query: 449 GTSPDYSPSSPQFSPSTGYS-PSQPGYSPSS--TSQYTPKT 336
SP YSPSSPQ+ P S P P YS ++Y+P +
Sbjct: 1847 SGSPGYSPSSPQYDPIAVTSVPRSPSYSVGKMVDAEYSPSS 1887
Score = 73.2 bits (178), Expect = 1e-11
Identities = 51/119 (42%), Positives = 60/119 (50%), Gaps = 39/119 (32%)
Frame = -2
Query: 581 RFSPSSPYSPTSPS-------YSPTSPS-----YSPTSPSYSPSSPT------------- 477
+ +P SP SP SP YSP SPS Y+PTSP Y+ SSPT
Sbjct: 1588 QMTPRSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKY 1647
Query: 476 --------YSPSSPYN-----SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
YSPSSP N S SPD SP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1648 KVNNTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1705
Score = 65.5 bits (158), Expect = 3e-09
Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 20/74 (27%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSP---------------YN 453
+SP+S YSPTSP+Y+PTSP+YSP+SP+Y + SP YSPSSP Y+
Sbjct: 1815 YSPTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVTSVPRSPSYS 1874
Query: 452 SGTSPD--YSPSSP 417
G D YSPSSP
Sbjct: 1875 VGKMVDAEYSPSSP 1888
[115][TOP]
>UniRef100_C5LSN8 P35 antigen, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5LSN8_9ALVE
Length = 170
Score = 114 bits (286), Expect = 4e-24
Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 9/97 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 57 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPT 116
Query: 404 -------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S + Y P + + P
Sbjct: 117 SPAYSPTSPAYSPTSPAYSPTSPAYYHPLVTSSDEGP 153
Score = 111 bits (278), Expect = 4e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 50 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPT 109
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 110 SPAYSPTSPAYSPTSPA-YSP 129
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 60
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 61 SPAYSPTSPAYSPTSPA-YSP 80
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 22 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 81
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 82 SPAYSPTSPAYSPTSPA-YSP 101
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 43 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 102
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 103 SPSYSPTSPAYSPTSPA-YSP 122
Score = 101 bits (252), Expect = 4e-20
Identities = 52/93 (55%), Positives = 64/93 (68%), Gaps = 18/93 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP+
Sbjct: 78 YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 137
Query: 401 T-----------------GYSPSQPGYSPSSTS 354
+ YSP+ P YS +S S
Sbjct: 138 SPAYYHPLVTSSDEGPVVRYSPTSPAYSNTSPS 170
[116][TOP]
>UniRef100_B6AG69 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AG69_9CRYT
Length = 1927
Score = 114 bits (286), Expect = 4e-24
Identities = 56/90 (62%), Positives = 67/90 (74%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP+YSPTSP YSP+SP YSP+SP+ S TSP+YSP+SP +SP
Sbjct: 1734 YSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPT 1793
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSPS P YSP+S S N + P
Sbjct: 1794 SPNYSPSSPHYSPTSPSYNPASPNYSPSSP 1823
Score = 113 bits (283), Expect = 9e-24
Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP+YSPTSP YSP+SP YSP+SP+ S TSP+YSPSSP +SP
Sbjct: 1748 YSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPT 1807
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S Y+P+ P YSPSS N + P
Sbjct: 1808 SPSYNPASPNYSPSSPHYNPASPNYSPSSP 1837
Score = 113 bits (283), Expect = 9e-24
Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP YSPTSP+YSPTSP YSP+SP YSPSSP+ S TSP Y+P+SP +SPS
Sbjct: 1762 YSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPS 1821
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
+ Y+P+ P YSPSS QY P
Sbjct: 1822 SPHYNPASPNYSPSS-PQYNP 1841
Score = 112 bits (279), Expect = 3e-23
Identities = 56/96 (58%), Positives = 73/96 (76%), Gaps = 8/96 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP+YSP+SP YSPTSPSY+P+SP YSPSSP+ + SP+YSPSSPQ++P+
Sbjct: 1783 YSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPSSPHYNPASPNYSPSSPQYNPA 1842
Query: 401 -TGYSPSQPGYSPSSTSQYTPK------TNDNKDDP 315
YSPS P Y+P+S + Y+P +N N D P
Sbjct: 1843 LPNYSPSSPQYNPTSPN-YSPSSPNYVLSNGNIDSP 1877
Score = 111 bits (278), Expect = 4e-23
Identities = 54/83 (65%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP+YSP+SP +SP
Sbjct: 1720 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPT 1779
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP+S + Y+P +
Sbjct: 1780 SPNYSPTSPHYSPTSPN-YSPSS 1801
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP+YSP+SP +SP
Sbjct: 1706 YSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPT 1765
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1766 SPNYSPTSPHYSPTSPN-YSP 1785
Score = 110 bits (276), Expect = 6e-23
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP
Sbjct: 1699 YSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPT 1758
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S Y+P
Sbjct: 1759 SPHYSPTSPNYSPTS-PHYSP 1778
Score = 109 bits (273), Expect = 1e-22
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1727 YSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPT 1786
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPSS Y+P
Sbjct: 1787 SPHYSPTSPNYSPSS-PHYSP 1806
Score = 108 bits (269), Expect = 4e-22
Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -2
Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
P SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP+ S TSP YSP+SP +SP S
Sbjct: 1694 PLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1753
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S + Y+P
Sbjct: 1754 NYSPTSPHYSPTSPN-YSP 1771
Score = 107 bits (268), Expect = 5e-22
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1713 YSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPT 1772
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S Y+P
Sbjct: 1773 SPHYSPTSPNYSPTS-PHYSP 1792
Score = 97.4 bits (241), Expect = 7e-19
Identities = 49/78 (62%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -2
Query: 569 SSPY-SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
SSP+ SPTSP P SP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S
Sbjct: 1681 SSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPH 1740
Query: 395 YSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S + Y+P
Sbjct: 1741 YSPTSPHYSPTSPN-YSP 1757
Score = 84.3 bits (207), Expect = 6e-15
Identities = 46/83 (55%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
Frame = -2
Query: 569 SSPYSPTSPSYS------PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+S YSPTSP YS +SP SPTSP P SP YSP+SP S TSP+YSP+SP +S
Sbjct: 1662 TSAYSPTSPVYSGDKDGDSSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYS 1721
Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342
P S YSP+ P YSP+S Y+P
Sbjct: 1722 PTSPHYSPTSPHYSPTS-PHYSP 1743
Score = 76.3 bits (186), Expect = 2e-12
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 13/94 (13%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTY------------SPSSPYNSGTSP 438
+SPSSP Y+P P+YSP+SP Y+PTSP+YSPSSP Y SPSSP+ +
Sbjct: 1832 YSPSSPQYNPALPNYSPSSPQYNPTSPNYSPSSPNYVLSNGNIDSPQYSPSSPHYDQSVA 1891
Query: 437 DYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKT 336
Y P+SP ++ ST + + YSP+S T K+
Sbjct: 1892 AYHPTSPSYT-STNMAAEEAEYSPTSPLGGTTKS 1924
Score = 65.5 bits (158), Expect = 3e-09
Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 37/114 (32%)
Frame = -2
Query: 572 PSSPYSPTSP--SYSPTSPSYSPTSPSYSP--------------SSPTYSPSSPYNSG-- 447
P SP SPTSP Y+PTSP Y+ SP+Y ++ YSP+SP SG
Sbjct: 1617 PYSPASPTSPLIDYTPTSPIYAVRSPAYGHETEERTKKRYKANIATSAYSPTSPVYSGDK 1676
Query: 446 ------------------TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP+YSP+SP +SP S YSP+ P YSP+S Y+P
Sbjct: 1677 DGDSSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTS-PHYSP 1729
[117][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1EA31_9CHLO
Length = 1720
Score = 113 bits (283), Expect = 9e-24
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1611 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPT 1670
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1671 SPQYSPTSPQYSPTS-PQYSP 1690
Score = 112 bits (281), Expect = 2e-23
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1590 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1649
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S QY+P
Sbjct: 1650 SPAYSPTSPAYSPTS-PQYSP 1669
Score = 112 bits (281), Expect = 2e-23
Identities = 58/102 (56%), Positives = 72/102 (70%), Gaps = 16/102 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 1618 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPT 1677
Query: 404 STGYSPSQPGYSPSS--------------TSQYTPKTNDNKD 321
S YSP+ P YSP+S + QY+P T + D
Sbjct: 1678 SPQYSPTSPQYSPTSLGLSDADAPTRSPTSPQYSPSTEADGD 1719
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1527 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1586
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1587 SPAYSPTSPAYSPTSPA-YSP 1606
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1548 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1607
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1608 SPAYSPTSPAYSPTSPA-YSP 1627
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1569 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1628
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1629 SPAYSPTSPAYSPTSPA-YSP 1648
Score = 106 bits (264), Expect = 1e-21
Identities = 51/77 (66%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S Y
Sbjct: 1524 SPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1583
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S + Y+P
Sbjct: 1584 SPTSPAYSPTSPA-YSP 1599
[118][TOP]
>UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TK89_PHYPA
Length = 1646
Score = 113 bits (283), Expect = 9e-24
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP YSP+SP S TSP Y+P+SP +SP
Sbjct: 1549 YSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPT 1608
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP+ P YSP+S S Y+P + K P
Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSPTSPAYKHKP 1637
Score = 111 bits (278), Expect = 4e-23
Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP ++P
Sbjct: 1542 YSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPT 1601
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621
Score = 109 bits (273), Expect = 1e-22
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP SP YSPTSP YSPTSP YSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 1535 YSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPT 1594
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S S Y+P
Sbjct: 1595 SPSYAPTSPSYSPTSPS-YSP 1614
Score = 108 bits (270), Expect = 3e-22
Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSP---SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
+FSP S P+SP+SP YSP+SP YSP SP YSP+SP YSP+SP S TSP YSP+SP +
Sbjct: 1511 QFSPYVGSMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSY 1570
Query: 410 SP-STGYSPSQPGYSPSSTSQYTP 342
SP S GYSP+ PGYSP+S S Y+P
Sbjct: 1571 SPTSPGYSPTSPGYSPTSPS-YSP 1593
Score = 108 bits (269), Expect = 4e-22
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSP SP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1528 YSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPT 1587
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y+P+S S Y+P
Sbjct: 1588 SPSYSPTSPSYAPTSPS-YSP 1607
Score = 105 bits (262), Expect = 3e-21
Identities = 50/76 (65%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP+Y+P+SP S TSP YSP+SP +SP
Sbjct: 1563 YSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPT 1622
Query: 404 STGYSPSQPGYSPSST 357
S YSP+ P Y T
Sbjct: 1623 SPSYSPTSPAYKHKPT 1638
Score = 80.5 bits (197), Expect = 9e-14
Identities = 47/82 (57%), Positives = 56/82 (68%), Gaps = 4/82 (4%)
Frame = -2
Query: 575 SPSSPYSPTSPS-YSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
SPS SP S + +SP S +SP+SP YSPSSP YSP SP S TSP YSP+SP +SP
Sbjct: 1499 SPSLRASPLSEAQFSPYVGSMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSP 1558
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S GYSP+ P YSP+S Y+P
Sbjct: 1559 TSPGYSPTSPSYSPTSPG-YSP 1579
Score = 64.3 bits (155), Expect = 7e-09
Identities = 39/90 (43%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPT--SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
SPS SP+ + + +SP S +SPSSP YSPSSP S SP YSP+SP
Sbjct: 1493 SPSYLLSPSLRASPLSEAQFSPYVGSMPFSPSSPGYSPSSPGYSPLSPGYSPTSP----- 1547
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
GYSP+ PGYSP+S + + PG
Sbjct: 1548 -GYSPTSPGYSPTSPGYSPTSPSYSPTSPG 1576
[119][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IRZ2_CHLRE
Length = 1789
Score = 113 bits (282), Expect = 1e-23
Identities = 55/82 (67%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1563 RYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1622
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1623 TSPAYSPTSPAYSPTSPA-YSP 1643
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1557 YSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1616
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1617 SPAYSPTSPAYSPTSPA-YSP 1636
Score = 111 bits (277), Expect = 5e-23
Identities = 54/84 (64%), Positives = 68/84 (80%), Gaps = 5/84 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1585 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1644
Query: 404 STGYSPSQPGYSPS---STSQYTP 342
S YSP+ P YSP+ ++ QY+P
Sbjct: 1645 SPAYSPTSPAYSPAYSPTSPQYSP 1668
Score = 110 bits (275), Expect = 8e-23
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1550 YSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1609
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1610 SPAYSPTSPAYSPTSPA-YSP 1629
Score = 109 bits (272), Expect = 2e-22
Identities = 52/76 (68%), Positives = 64/76 (84%), Gaps = 1/76 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP+
Sbjct: 1599 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPA 1658
Query: 401 TGYSPSQPGYSPSSTS 354
YSP+ P YSP+S S
Sbjct: 1659 --YSPTSPQYSPTSPS 1672
Score = 106 bits (265), Expect = 1e-21
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -2
Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
P SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S
Sbjct: 1545 PMSPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1604
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S + Y+P
Sbjct: 1605 AYSPTSPAYSPTSPA-YSP 1622
Score = 104 bits (259), Expect = 6e-21
Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+ S TSP YSP+SP SP
Sbjct: 1620 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPA---YSPTSPQYSPTSPSMSPT 1676
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNK 324
S YSP+ P YSP+S + Y+P T +
Sbjct: 1677 SPRYSPTSPNYSPTSPN-YSPSTRQRR 1702
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSP----TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
+SP+SP YSPTSP+YSP TSP YSPTSPS SP+SP YSP+SP S TSP+YSPS+ Q
Sbjct: 1641 YSPTSPAYSPTSPAYSPAYSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPTSPNYSPSTRQ 1700
Query: 413 FSPSTGYSPSQPGYSPSSTSQYTP 342
ST P+ G ++ Q P
Sbjct: 1701 RRRSTRPRPTSLGRRRAARVQAAP 1724
Score = 76.3 bits (186), Expect = 2e-12
Identities = 47/124 (37%), Positives = 61/124 (49%), Gaps = 53/124 (42%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSP----TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
+SP+SP YSPTSP+YSPTSP+YSP TSP YSP+SP+ SP+SP S TSP+YSP+SP
Sbjct: 1634 YSPTSPAYSPTSPAYSPTSPAYSPAYSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPTSPN 1693
Query: 413 FSPST------------------------------------------------GYSPSQP 378
+SPST + P++P
Sbjct: 1694 YSPSTRQRRRSTRPRPTSLGRRRAARVQAAPTPAPPTAPPRMSAPSTHLAPPSAHPPTRP 1753
Query: 377 GYSP 366
+P
Sbjct: 1754 RRAP 1757
Score = 73.2 bits (178), Expect = 1e-11
Identities = 41/79 (51%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Frame = -2
Query: 566 SPYSPTSP-SYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399
S +SP P ++SP P SP YSP+SP YSP+SP S TSP YSP+SP +SP S
Sbjct: 1524 SGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSP 1583
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S + Y+P
Sbjct: 1584 AYSPTSPAYSPTSPA-YSP 1601
[120][TOP]
>UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q3C6_ANOGA
Length = 1878
Score = 113 bits (282), Expect = 1e-23
Identities = 57/86 (66%), Positives = 68/86 (79%), Gaps = 7/86 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SPSSP YSPTSPSYSPTSPSYSPTSP+++P +P+YSPSSP S TSP YSP+SP +SPS
Sbjct: 1679 YSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPS 1738
Query: 401 T-GYSPSQPGYSPSSTS-----QYTP 342
+ YSP+ P YSP+S S YTP
Sbjct: 1739 SPKYSPTSPSYSPTSPSYIGSPHYTP 1764
Score = 112 bits (281), Expect = 2e-23
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SP +SPTSPSYSPSSP+YSP+SP S TSP YSP+SP F+P
Sbjct: 1651 YSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPV 1710
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
T YSPS P YSP+S Y+P
Sbjct: 1711 TPSYSPSSPNYSPTS-PHYSP 1730
Score = 111 bits (277), Expect = 5e-23
Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP +SPTSPSYSP+SPSYSPTSPSYSP+SP+YSP+SP + +P YSPSSP +SP
Sbjct: 1665 YSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPT 1724
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSPSS +Y+P
Sbjct: 1725 SPHYSPASPSYSPSS-PKYSP 1744
Score = 106 bits (264), Expect = 1e-21
Identities = 51/83 (61%), Positives = 69/83 (83%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSP+SP +SPTSPSYSP+SPSYSP+SP+YSP+SP S TSP+++P +P +SPS
Sbjct: 1658 YSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPS 1717
Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336
+ YSP+ P YSP+S S Y+P +
Sbjct: 1718 SPNYSPTSPHYSPASPS-YSPSS 1739
Score = 101 bits (251), Expect = 5e-20
Identities = 51/88 (57%), Positives = 62/88 (70%), Gaps = 7/88 (7%)
Frame = -2
Query: 578 FSPSSPYSPTS------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SP SP PTS P YSPTSPSYSPTSPSYSPSSP +SP+SP S +SP YSP+SP
Sbjct: 1632 YSPMSPMHPTSASNFASPGYSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSP 1691
Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTPKT 336
+SP S YSP+ P ++P T Y+P +
Sbjct: 1692 SYSPTSPSYSPTSPNFTP-VTPSYSPSS 1718
Score = 101 bits (251), Expect = 5e-20
Identities = 53/99 (53%), Positives = 69/99 (69%), Gaps = 15/99 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411
+SP+SP ++P +PSYSP+SP+YSPTSP YSP+SP+YSPSSP S TSP YSP+SP +
Sbjct: 1700 YSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSPKYSPTSPSYSPTSPSYIGS 1759
Query: 410 ------SPSTG-----YSPSQPGYSPSSTSQYTPKTNDN 327
SP G YSP+ P YSPSS Q++P ++ N
Sbjct: 1760 PHYTPASPQYGQASPNYSPTSPSYSPSS-PQHSPGSSSN 1797
Score = 94.7 bits (234), Expect = 5e-18
Identities = 47/79 (59%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP SPSYSP+SP YSPTSPSYSP+SP+Y SP+ + SP Y +SP +SP
Sbjct: 1721 YSPTSPHYSPASPSYSPSSPKYSPTSPSYSPTSPSYI-GSPHYTPASPQYGQASPNYSPT 1779
Query: 404 STGYSPSQPGYSPSSTSQY 348
S YSPS P +SP S+S +
Sbjct: 1780 SPSYSPSSPQHSPGSSSNH 1798
Score = 92.8 bits (229), Expect = 2e-17
Identities = 53/103 (51%), Positives = 63/103 (61%), Gaps = 24/103 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSY------SPSSPTYSPSSPYNSGTSPDYSPSS 420
+SP+SP YSP+SP YSPTSPSYSPTSPSY +P+SP Y +SP S TSP YSPSS
Sbjct: 1728 YSPASPSYSPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSS 1787
Query: 419 PQFSPSTG-----------------YSPSQPGYSPSSTSQYTP 342
PQ SP + YSP+ YSPSS +Y+P
Sbjct: 1788 PQHSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYSPSS-PKYSP 1829
Score = 92.0 bits (227), Expect = 3e-17
Identities = 51/100 (51%), Positives = 61/100 (61%), Gaps = 19/100 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSP-----SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SPSSP Y+P SP SYSPTSP YSP SP YSP S YSPSSP + +YSP+SP
Sbjct: 1571 YSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPNIHSATQNYSPTSP 1630
Query: 416 QFSP-------------STGYSPSQPGYSPSSTSQYTPKT 336
+SP S GYSP+ P YSP+S S Y+P +
Sbjct: 1631 SYSPMSPMHPTSASNFASPGYSPTSPSYSPTSPS-YSPSS 1669
Score = 87.0 bits (214), Expect = 9e-16
Identities = 53/122 (43%), Positives = 67/122 (54%), Gaps = 35/122 (28%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSP------------------------------SYS 492
++P+SP Y SP+YSPTSPSYSP+SP SYS
Sbjct: 1762 YTPASPQYGQASPNYSPTSPSYSPSSPQHSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYS 1821
Query: 491 PSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPG---YSPSSTSQYTPKTNDNK 324
PSSP YSP+SP + +SP YSPSSP +SP+ GYSPS P YSP+S P +D+
Sbjct: 1822 PSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPSSPASPTYSPTS-----PSYDDSN 1876
Query: 323 DD 318
+D
Sbjct: 1877 ED 1878
Score = 84.3 bits (207), Expect = 6e-15
Identities = 47/88 (53%), Positives = 56/88 (63%), Gaps = 7/88 (7%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP P SP+ SPSYSP+SP+Y+P SP SYSP+SP YSP SP S S +YSPSSP
Sbjct: 1558 SPYPPSSPSMSPSYSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPN 1617
Query: 413 FSPST-GYSPSQPGYSPSSTSQYTPKTN 333
+T YSP+ P YSP S T +N
Sbjct: 1618 IHSATQNYSPTSPSYSPMSPMHPTSASN 1645
Score = 80.1 bits (196), Expect = 1e-13
Identities = 46/90 (51%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-P 405
R SPSSP PS SP PS SPSYSPSSP Y+P+SP G SP YSP+SP +S P
Sbjct: 1547 RGSPSSP----GPSMSPYPPSSPSMSPSYSPSSPNYAPNSP--GGASPSYSPTSPGYSPP 1600
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S YSP YSPSS + ++ N + P
Sbjct: 1601 SPQYSPGSSNYSPSSPNIHSATQNYSPTSP 1630
Score = 65.9 bits (159), Expect = 2e-09
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 18/101 (17%)
Frame = -2
Query: 578 FSPSSPYS---PTSPSYSPTSPS---------YSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
+SPS P S P PS+SP++ S +SP S S P+ SP P + SP
Sbjct: 1511 WSPSGPASGMTPGGPSFSPSAQSDASGMSPSSWSPIRGSPSSPGPSMSPYPPSSPSMSPS 1570
Query: 434 YSPSSPQFSP------STGYSPSQPGYSPSSTSQYTPKTND 330
YSPSSP ++P S YSP+ PGYSP S QY+P +++
Sbjct: 1571 YSPSSPNYAPNSPGGASPSYSPTSPGYSPPS-PQYSPGSSN 1610
[121][TOP]
>UniRef100_Q4QZ03 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum tuberosum
RepID=Q4QZ03_SOLTU
Length = 361
Score = 112 bits (280), Expect = 2e-23
Identities = 57/81 (70%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP
Sbjct: 130 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 189
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ YSP+S S Y+P
Sbjct: 190 SPSYSPTSSSYSPTSPS-YSP 209
Score = 111 bits (278), Expect = 4e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP+YSPTSP+YSPT PSYSP+ P+YSP+SP S TSP YSP+SP +SP+
Sbjct: 214 YSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPT 273
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
YSP+ PGYSP+S S Y+P
Sbjct: 274 FPAYSPTSPGYSPTSPS-YSP 293
Score = 110 bits (275), Expect = 8e-23
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+S +YSP+SP S TSP YSP+SP +SP
Sbjct: 165 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPT 224
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+ S Y+P
Sbjct: 225 SPAYSPTSPAYSPTLPS-YSP 244
Score = 110 bits (275), Expect = 8e-23
Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSPSYSPTSPSYSPTS SYSP+SP+YSP+SP S TSP YSP+SP +SP
Sbjct: 172 YSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPT 231
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+ S Y+P
Sbjct: 232 SPAYSPTLPSYSPTLPS-YSP 251
Score = 108 bits (270), Expect = 3e-22
Identities = 56/92 (60%), Positives = 67/92 (72%), Gaps = 13/92 (14%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS------- 423
+SP+SP YSPTSPSYSPT P+YSPTSP YSP+SP+YSP+SP S TSP Y+PS
Sbjct: 256 YSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSL 315
Query: 422 -----SPQFSPSTGYSPSQPGYSPSSTSQYTP 342
SP+ SPS+ YSPS P YSP+S S Y+P
Sbjct: 316 AYSPTSPKLSPSSPYSPSSPSYSPTSPS-YSP 346
Score = 108 bits (269), Expect = 4e-22
Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 6/87 (6%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSPTSPSYSPT P+YSP+SP YSP+SP S TSP YSP+SP ++PS
Sbjct: 249 YSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPS 308
Query: 401 TGYSPSQPGYSPSS-----TSQYTPKT 336
YSPS YSP+S +S Y+P +
Sbjct: 309 ARYSPSL-AYSPTSPKLSPSSPYSPSS 334
Score = 107 bits (268), Expect = 5e-22
Identities = 53/81 (65%), Positives = 66/81 (81%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+S S TSP YSP+SP +SP
Sbjct: 158 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPT 217
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 218 SPAYSPTSPAYSPTSPA-YSP 237
Score = 107 bits (268), Expect = 5e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+ P YSPT PSYSPTSPSYSPTSPSYSP+SP+YSP+ P S TSP YSP+SP +SP
Sbjct: 235 YSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPT 294
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P Y+PS ++Y+P
Sbjct: 295 SPSYSPTSPSYNPS--ARYSP 313
Score = 107 bits (266), Expect = 9e-22
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSP-SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP SS YSPTSPSYSPTSP YSPTSP+YSP+SP YSP+SP S T P YSP+ P +SP
Sbjct: 193 YSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPT 252
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 253 SPSYSPTSPSYSPTSPS-YSP 272
Score = 106 bits (265), Expect = 1e-21
Identities = 51/81 (62%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP S TS YSP+SP +SP+
Sbjct: 151 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPT 210
Query: 401 TG-YSPSQPGYSPSSTSQYTP 342
+ YSP+ P YSP+S + Y+P
Sbjct: 211 SPIYSPTSPAYSPTSPA-YSP 230
Score = 106 bits (264), Expect = 1e-21
Identities = 54/85 (63%), Positives = 65/85 (76%), Gaps = 3/85 (3%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
FSP+S YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP
Sbjct: 115 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 174
Query: 404 -STGYSPSQPGYSPSSTSQYTPKTN 333
S YSP+ P YSP+S S Y+P ++
Sbjct: 175 TSPAYSPTSPSYSPTSPS-YSPTSS 198
Score = 101 bits (252), Expect = 4e-20
Identities = 56/86 (65%), Positives = 62/86 (72%), Gaps = 14/86 (16%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPS------------SPTYSPSSPYNSGTSP 438
+SP+SP YSPTSPSYSPTSPSYSPTSPSY+PS SP SPSSPY S +SP
Sbjct: 277 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPY-SPSSP 335
Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPS 363
YSP+SP +SP S YSPS P YSPS
Sbjct: 336 SYSPTSPSYSPTSPSYSPSSPTYSPS 361
Score = 96.3 bits (238), Expect = 2e-18
Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTSP+YSPT PSYSPT PSYSP+SP +YSP+SP S T P YSP+
Sbjct: 221 YSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPT 280
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S YSP+ P YSP+S S Y P
Sbjct: 281 SPGYSPTSPSYSPTSPSYSPTSPS-YNP 307
Score = 87.0 bits (214), Expect = 9e-16
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
Frame = -2
Query: 542 SYSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369
++SPTS P YSP+SP YSPSSP YSP+SP S TSP YSP+SP +SP S YSPS PGYS
Sbjct: 114 AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 173
Query: 368 PSSTSQYTP 342
P+S + Y+P
Sbjct: 174 PTSPA-YSP 181
Score = 80.9 bits (198), Expect = 7e-14
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS 465
+ SPSSPYSP+SPSYSPTSPSYSPTSPSYSPSSPTYSPS
Sbjct: 323 KLSPSSPYSPSSPSYSPTSPSYSPTSPSYSPSSPTYSPS 361
Score = 72.4 bits (176), Expect = 2e-11
Identities = 38/59 (64%), Positives = 42/59 (71%), Gaps = 6/59 (10%)
Frame = -2
Query: 581 RFSPSSPYSPTSPS------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
R+SPS YSPTSP YSP+SPSYSPTSPSYSP+SP+YSPS SP YSPS
Sbjct: 310 RYSPSLAYSPTSPKLSPSSPYSPSSPSYSPTSPSYSPTSPSYSPS-------SPTYSPS 361
Score = 60.1 bits (144), Expect = 1e-07
Identities = 42/87 (48%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Frame = -2
Query: 575 SPSSPYSP-TSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQ 414
SP+ SP T +SP ++SPTS SP YSPSSP G +SP YSP+SP
Sbjct: 93 SPNMRMSPITDAQFSPYVGGMAFSPTS------SPGYSPSSP---GYSPSSPGYSPTSPG 143
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKT 336
+SP S GYSP+ PGYSP+S + Y+P +
Sbjct: 144 YSPTSPGYSPTSPGYSPTSPT-YSPSS 169
[122][TOP]
>UniRef100_Q58EF0 Polr2a protein (Fragment) n=2 Tax=Danio rerio RepID=Q58EF0_DANRE
Length = 161
Score = 111 bits (277), Expect = 5e-23
Identities = 54/100 (54%), Positives = 74/100 (74%), Gaps = 12/100 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP+YSPT+P YSPTSP+YSP+SPTY+P+SP S TSP YSP+SP++SP
Sbjct: 59 KYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSP 118
Query: 404 S-----------TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + Y+P + + D
Sbjct: 119 TSPTYSPTSPKGSTYSPTSPGYSPTSPT-YSPAISPDDSD 157
Score = 110 bits (274), Expect = 1e-22
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 52 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSP 111
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 112 TSPKYSPTSPTYSPTSPKGSTYSP 135
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 11 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 70
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 71 SPTYSPTTPKYSPTSPT-YSP 90
Score = 108 bits (270), Expect = 3e-22
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 3 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 62
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 63 TSPKYSPTSPTYSP-TTPKYSP 83
Score = 108 bits (270), Expect = 3e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 39 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPT 98
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 99 SPKYSPTSPTYSPTS-PKYSP 118
Score = 103 bits (256), Expect = 1e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 31 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 90
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 91 TSPTYTPTSPKYSPTSPT-YSP 111
Score = 90.5 bits (223), Expect = 8e-17
Identities = 42/69 (60%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -2
Query: 545 PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369
P Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YS
Sbjct: 2 PRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 61
Query: 368 PSSTSQYTP 342
P+S +Y+P
Sbjct: 62 PTS-PKYSP 69
Score = 79.7 bits (195), Expect = 2e-13
Identities = 42/80 (52%), Positives = 59/80 (73%), Gaps = 5/80 (6%)
Frame = -2
Query: 560 YSPTSPSYSPTSP----SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396
Y+P SP+Y+ SYSP+SPSYSP+SP Y+P+SP S +SP+Y+P+SP++SP S
Sbjct: 4 YTPQSPTYT----PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPK 59
Query: 395 YSPSQPGYSPSSTSQYTPKT 336
YSP+ P YSP+S + Y+P T
Sbjct: 60 YSPTSPKYSPTSPT-YSPTT 78
[123][TOP]
>UniRef100_O96452 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
RepID=O96452_ANTLO
Length = 1553
Score = 111 bits (277), Expect = 5e-23
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1439 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1498
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1499 SPAYSPTSPAYSPTSPA-YSP 1518
Score = 107 bits (267), Expect = 7e-22
Identities = 51/78 (65%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1460 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1519
Query: 404 STGYSPSQPGYSPSSTSQ 351
S YSP+ P Y PS+ ++
Sbjct: 1520 SPAYSPTSPVYRPSTRAK 1537
Score = 106 bits (265), Expect = 1e-21
Identities = 51/76 (67%), Positives = 62/76 (81%), Gaps = 1/76 (1%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390
S YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS
Sbjct: 1437 SVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYS 1496
Query: 389 PSQPGYSPSSTSQYTP 342
P+ P YSP+S + Y+P
Sbjct: 1497 PTSPAYSPTSPA-YSP 1511
Score = 97.4 bits (241), Expect = 7e-19
Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP + PS
Sbjct: 1474 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPVYRPS 1533
Query: 401 TGYSPSQPGYS 369
T G++
Sbjct: 1534 TRAKDQDQGFN 1544
Score = 96.7 bits (239), Expect = 1e-18
Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 11/89 (12%)
Frame = -2
Query: 575 SPSSPYSP---------TSPS-YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
S S P+SP T+PS YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP
Sbjct: 1417 SSSVPFSPIAAHGYAAGTTPSVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1476
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1477 TSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1504
Score = 71.6 bits (174), Expect = 4e-11
Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 19/91 (20%)
Frame = -2
Query: 557 SPTSP-SYSPTSPS-----------------YSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
SP S Y +S YSPTSP+YSP+SP YSP+SP S TSP Y
Sbjct: 1408 SPVSDVRYGSSSVPFSPIAAHGYAAGTTPSVYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1467
Query: 431 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1468 SPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1497
[124][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
macrandra RepID=Q9C428_9FUNG
Length = 1603
Score = 110 bits (276), Expect = 6e-23
Identities = 53/72 (73%), Positives = 61/72 (84%), Gaps = 2/72 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SP+SP YSPTSPSYSPTSPSY+PTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S
Sbjct: 1532 SPTSPGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1591
Query: 401 TGYSPSQPGYSP 366
YSP+ P YSP
Sbjct: 1592 PSYSPTSPSYSP 1603
Score = 94.4 bits (233), Expect = 6e-18
Identities = 49/76 (64%), Positives = 58/76 (76%), Gaps = 4/76 (5%)
Frame = -2
Query: 557 SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQP 378
SPTSP YSPTSPSYSPTSPSY+P+SP+YSP+SP S TSP YSP+SP +SP+ SPS
Sbjct: 1532 SPTSPGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPSYS 1588
Query: 377 ----GYSPSSTSQYTP 342
YSP+S S Y+P
Sbjct: 1589 PTSPSYSPTSPS-YSP 1603
[125][TOP]
>UniRef100_UPI00006A20E2 DNA-directed RNA polymerase II subunit RPB1 (EC 2.7.7.6) (RNA
polymerase II subunit B1) (DNA-directed RNA polymerase
II subunit A) (DNA-directed RNA polymerase III largest
subunit). n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A20E2
Length = 162
Score = 110 bits (275), Expect = 8e-23
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP
Sbjct: 51 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 110
Query: 404 -STGYSPSQPGYSPSST--SQYTP 342
S YSP+ P YSP+S S Y+P
Sbjct: 111 TSPKYSPTSPTYSPTSPKGSTYSP 134
Score = 109 bits (272), Expect = 2e-22
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP
Sbjct: 10 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 69
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 70 SPTYSPTTPKYSPTSPT-YSP 89
Score = 108 bits (270), Expect = 3e-22
Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP
Sbjct: 2 RYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 61
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP +T +Y+P
Sbjct: 62 TSPKYSPTSPTYSP-TTPKYSP 82
Score = 108 bits (269), Expect = 4e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P
Sbjct: 38 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 97
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 98 SPKYSPTSPTYSPTS-PKYSP 117
Score = 107 bits (267), Expect = 7e-22
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 65 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 124
Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + YSP+ PGYSP+S + + DD
Sbjct: 125 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 157
Score = 102 bits (255), Expect = 2e-20
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP
Sbjct: 30 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 89
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ P YSP+S + Y+P
Sbjct: 90 TSPVYTPTSPKYSPTSPT-YSP 110
Score = 94.0 bits (232), Expect = 8e-18
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414
++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 79 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 138
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
+SP S YS + P SP + +
Sbjct: 139 YSPTSPTYSLTSPAISPDDSDE 160
Score = 91.7 bits (226), Expect = 4e-17
Identities = 43/69 (62%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = -2
Query: 545 PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369
P Y+P SPSY+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YS
Sbjct: 1 PRYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 60
Query: 368 PSSTSQYTP 342
P+S +Y+P
Sbjct: 61 PTS-PKYSP 68
[126][TOP]
>UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y387_SORBI
Length = 1874
Score = 109 bits (272), Expect = 2e-22
Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP S SYSPTSP YSPTSPSYSP+S +YSP+SP+ S TSP YSPSSP +SP
Sbjct: 1673 YSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPSYSPT 1732
Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342
S GYSP+ PGYSP+S + Y+P
Sbjct: 1733 SPTYSPTSLGYSPTSPGYSPTSPT-YSP 1759
Score = 102 bits (255), Expect = 2e-20
Identities = 55/91 (60%), Positives = 65/91 (71%), Gaps = 11/91 (12%)
Frame = -2
Query: 581 RFSPSSP----------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
R++PSSP YSP S SYSPTSP YSPTSPSYSP+S +YSP+SP+ S TSP Y
Sbjct: 1642 RYNPSSPSFSPTSTSPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSY 1701
Query: 431 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP+S +SP S YSP+ P YSPSS S Y+P
Sbjct: 1702 SPASLSYSPTSPFYSPTSPSYSPSSPS-YSP 1731
Score = 101 bits (252), Expect = 4e-20
Identities = 53/90 (58%), Positives = 63/90 (70%), Gaps = 9/90 (10%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSPTSP YSPTSPSYSP+SPSYSP+SPTYSP+S S TSP YSP+
Sbjct: 1694 YSPTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPT 1753
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
SP +SP S YSP+ P Y+ S T + T
Sbjct: 1754 SPTYSPTSPNYSPTSPSYNLSYTEYNSSNT 1783
Score = 95.9 bits (237), Expect = 2e-18
Identities = 52/112 (46%), Positives = 67/112 (59%), Gaps = 24/112 (21%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411
+SP+SP YSP+SPSYSPTSP+YSPTS YSP+SP YSP+SP S TSP+YSP+SP +
Sbjct: 1715 YSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLS 1774
Query: 410 --------------------SPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S + YSP+ P YSP+S S P + + + P
Sbjct: 1775 YTEYNSSNTYSPTRPRITLDSQAPDYSPTSPTYSPTSPSYSLPSLSYSPNRP 1826
Score = 88.2 bits (217), Expect = 4e-16
Identities = 55/122 (45%), Positives = 65/122 (53%), Gaps = 39/122 (31%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY-------------SPT---------SPSYSPSSPTYSP 468
+SP+SP YSPTSP+YSPTSPSY SPT +P YSP+SPTYSP
Sbjct: 1750 YSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSSNTYSPTRPRITLDSQAPDYSPTSPTYSP 1809
Query: 467 SSPYNS----------------GTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKT 336
+SP S SPDYSP+SP FSP+ SP+ YSPSST Q K
Sbjct: 1810 TSPSYSLPSLSYSPNRPTDDSGRPSPDYSPTSPNFSPNRSDSPTAADYSPSSTGQAIEKD 1869
Query: 335 ND 330
+
Sbjct: 1870 GE 1871
Score = 85.5 bits (210), Expect = 3e-15
Identities = 54/132 (40%), Positives = 64/132 (48%), Gaps = 54/132 (40%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP---------------YNSG 447
+SPSSP YSPTSP+YSPTS YSPTSP YSP+SPTYSP+SP YNS
Sbjct: 1722 YSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSS 1781
Query: 446 ---------------------TSPDYSPSSPQFS-----------------PSTGYSPSQ 381
TSP YSP+SP +S PS YSP+
Sbjct: 1782 NTYSPTRPRITLDSQAPDYSPTSPTYSPTSPSYSLPSLSYSPNRPTDDSGRPSPDYSPTS 1841
Query: 380 PGYSPSSTSQYT 345
P +SP+ + T
Sbjct: 1842 PNFSPNRSDSPT 1853
Score = 81.6 bits (200), Expect = 4e-14
Identities = 50/106 (47%), Positives = 63/106 (59%), Gaps = 27/106 (25%)
Frame = -2
Query: 578 FSPSSP-YSPTSP------SYSPTSPSYSP-------------------TSPSYSPSSPT 477
++P SP YSPT+P SYS SP Y+P TSPSYSP+S +
Sbjct: 1606 YTPMSPVYSPTTPVSSQIQSYSSASPIYNPISPNSSRYNPSSPSFSPTSTSPSYSPASAS 1665
Query: 476 YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
YSP+SP+ S TSP YSP+S +SP S YSP+ P YSP+S S Y+P
Sbjct: 1666 YSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLS-YSP 1710
Score = 78.2 bits (191), Expect = 4e-13
Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 19/97 (19%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSP------TYSPSSPYNSGTSPD---YSPS 423
S S+ Y+P SP YSPT+P Y+P SP YSP++P +YS +SP + SP+ Y+PS
Sbjct: 1587 STSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNPISPNSSRYNPS 1646
Query: 422 SPQFSP----------STGYSPSQPGYSPSSTSQYTP 342
SP FSP S YSP+ P YSP+S S Y+P
Sbjct: 1647 SPSFSPTSTSPSYSPASASYSPTSPFYSPTSPS-YSP 1682
Score = 73.9 bits (180), Expect = 8e-12
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 11/86 (12%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP------DYSPSSPQFSP 405
+PY+ SP + TS SY+P SP YSP++P Y+P SP S T+P YS +SP ++P
Sbjct: 1576 TPYNAASPVNASTSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNP 1635
Query: 404 ----STGYSPSQPGYSPSSTS-QYTP 342
S+ Y+PS P +SP+STS Y+P
Sbjct: 1636 ISPNSSRYNPSSPSFSPTSTSPSYSP 1661
Score = 62.4 bits (150), Expect = 2e-08
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Frame = -2
Query: 560 YSPTSPSYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYS 390
Y SP Y+P SP + TS SY+P SP YSP++P + SP YSP++P S YS
Sbjct: 1568 YMAVSPIYTPYNAASPVNASTSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYS 1627
Query: 389 PSQPGYSPSS--TSQYTPKT 336
+ P Y+P S +S+Y P +
Sbjct: 1628 SASPIYNPISPNSSRYNPSS 1647
[127][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MI48_9CHLO
Length = 1694
Score = 109 bits (272), Expect = 2e-22
Identities = 54/86 (62%), Positives = 67/86 (77%), Gaps = 7/86 (8%)
Frame = -2
Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1556 YSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1615
Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1616 AYSPTSPAYSPTSPAYSPTSPA-YSP 1640
Score = 109 bits (272), Expect = 2e-22
Identities = 52/75 (69%), Positives = 63/75 (84%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1582 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1641
Query: 404 STGYSPSQPGYSPSS 360
S YSP+ P YSP+S
Sbjct: 1642 SPAYSPTSPQYSPTS 1656
Score = 106 bits (264), Expect = 1e-21
Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 7/86 (8%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-----PSSPTYSPSSPYNSGTSPDYSPSSP 417
FSP+SP YSPTSP+YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP
Sbjct: 1528 FSPTSPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSP 1587
Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1588 AYSPTSPAYSPTSPAYSPTSPA-YSP 1612
Score = 103 bits (257), Expect = 1e-20
Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 11/98 (11%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SPQ+SP+
Sbjct: 1596 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPT 1655
Query: 401 T----------GYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ SP+ P YSP+ ++P K++
Sbjct: 1656 SVGLSDVENAPTRSPTSPQYSPTE-GAFSPMETTEKEE 1692
Score = 94.0 bits (232), Expect = 8e-18
Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 14/93 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPS-----YSPTSPSYS-------PSSPTYSPSSPYNSGTSP 438
+SP+SP YSPTSP+YSPTSP+ YSPTSP+YS P+SP YSP+SP S TSP
Sbjct: 1542 YSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1601
Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1602 AYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1633
[128][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
castellanii RepID=O00820_ACACA
Length = 1569
Score = 109 bits (272), Expect = 2e-22
Identities = 52/74 (70%), Positives = 60/74 (81%), Gaps = 2/74 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SPSSP YSP SP YSP+SP+YSPTSP YSP+SP+YSP+SP S TSP YSPSSP +SP
Sbjct: 1496 YSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPSSPSYSPT 1555
Query: 404 STGYSPSQPGYSPS 363
S YSP+ P YSPS
Sbjct: 1556 SPSYSPTSPSYSPS 1569
Score = 108 bits (270), Expect = 3e-22
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SPSSP YSP+SP YSP SP YSP+SP+YSP+SP YSP+SP S TSP YSP+SP +SPS
Sbjct: 1489 YSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPS 1548
Query: 401 T-GYSPSQPGYSPSSTSQYTP 342
+ YSP+ P YSP+S S Y+P
Sbjct: 1549 SPSYSPTSPSYSPTSPS-YSP 1568
Score = 106 bits (264), Expect = 1e-21
Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP YSP+SP YSP+SP YSP+SP YSP+SP YSPSSP S TSP YSP+
Sbjct: 1468 YSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPA 1527
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S YSP+ P YSPSS S Y+P
Sbjct: 1528 SPSYSPTSPAYSPTSPSYSPSSPS-YSP 1554
Score = 100 bits (248), Expect = 1e-19
Identities = 52/80 (65%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SPSSP YSP SP YSP YSP+SP YSPSSP YSPSSP S SP YSPSSP +SP S
Sbjct: 1462 SPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTS 1521
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S + Y+P
Sbjct: 1522 PKYSPASPSYSPTSPA-YSP 1540
Score = 93.6 bits (231), Expect = 1e-17
Identities = 49/80 (61%), Positives = 55/80 (68%), Gaps = 5/80 (6%)
Frame = -2
Query: 566 SPYSPTS----PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SP SP P YSP+SP YSP SP YSPSSP YSP+SP S SP YSP+SP +SP S
Sbjct: 1483 SPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTS 1542
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSPS P YSP+S S Y+P
Sbjct: 1543 PSYSPSSPSYSPTSPS-YSP 1561
Score = 87.4 bits (215), Expect = 7e-16
Identities = 48/85 (56%), Positives = 57/85 (67%), Gaps = 6/85 (7%)
Frame = -2
Query: 578 FSPSSPYSPTSP-----SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
+SP + SP S SP+SPSYSP SP YSP+ YSPSSP S +SP YSPSSP
Sbjct: 1443 YSPYVDFGEFSPGRGSFSPSPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPG 1502
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S GYSPS P YSP+S +Y+P
Sbjct: 1503 YSPASPGYSPSSPAYSPTS-PKYSP 1526
Score = 58.9 bits (141), Expect = 3e-07
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
F ++P SP +P + SYSP +SP ++SPS +SP YSP+SP +SP
Sbjct: 1424 FFHTTPMYRMSPGATPAA-SYSPYVDFGEFSPGRGSFSPSP-----SSPSYSPASPGYSP 1477
Query: 404 S-TGYSPSQPGYSPSSTSQYTPKT 336
+ GYSPS PGYSPSS Y+P +
Sbjct: 1478 AGAGYSPSSPGYSPSSPG-YSPSS 1500
[129][TOP]
>UniRef100_A7AWJ0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AWJ0_BABBO
Length = 1746
Score = 108 bits (271), Expect = 2e-22
Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1602 YSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1661
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1662 SPAYSPTSPAYSPTSPA-YSP 1681
Score = 108 bits (269), Expect = 4e-22
Identities = 52/83 (62%), Positives = 67/83 (80%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP+
Sbjct: 1623 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1682
Query: 401 T---GYSPSQPGYSPSSTSQYTP 342
+ GY P+ P Y P+S + Y+P
Sbjct: 1683 SPNLGYLPTSPAYRPTSPA-YSP 1704
Score = 105 bits (262), Expect = 3e-21
Identities = 54/83 (65%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1616 YSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1675
Query: 404 STGYSPSQP--GYSPSSTSQYTP 342
S YSP+ P GY P+S + Y P
Sbjct: 1676 SPAYSPTSPNLGYLPTSPA-YRP 1697
Score = 103 bits (258), Expect = 7e-21
Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 5/93 (5%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQF 411
+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP N G TSP Y P+SP +
Sbjct: 1644 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP-NLGYLPTSPAYRPTSPAY 1702
Query: 410 SP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP S YSP+ P YSP+S + +DP
Sbjct: 1703 SPTSPAYSPTSPAYSPTSPVYSPTSPEYSPEDP 1735
Score = 97.4 bits (241), Expect = 7e-19
Identities = 49/83 (59%), Positives = 61/83 (73%), Gaps = 4/83 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP YSPTSP+YSPTSP+YSPTSP+ Y P+SP Y P+SP S TSP YSP+SP +S
Sbjct: 1658 YSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSPAYSPTSPAYSPTSPAYS 1717
Query: 407 PSTG-YSPSQPGYSPSSTSQYTP 342
P++ YSP+ P YSP P
Sbjct: 1718 PTSPVYSPTSPEYSPEDPFSPNP 1740
Score = 94.4 bits (233), Expect = 6e-18
Identities = 48/80 (60%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SP+SP YSPTSP Y YSP SP+YSP+SP YSP+SP S TSP YSP+SP +SP S
Sbjct: 1582 SPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTS 1641
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S + Y+P
Sbjct: 1642 PAYSPTSPAYSPTSPA-YSP 1660
Score = 87.0 bits (214), Expect = 9e-16
Identities = 54/109 (49%), Positives = 63/109 (57%), Gaps = 30/109 (27%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSY--------------------SPTSPSYSPTSP-------SYSPS 486
FSP+ SP SP SPSY SPTSP YSPTSP YSP+
Sbjct: 1546 FSPTIMSPQSPVSPSYAPLSPNPLSPNPLSPSMGMMSPTSPVYSPTSPVYGQAGGVYSPA 1605
Query: 485 SPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S + Y+P
Sbjct: 1606 SPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1653
[130][TOP]
>UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura
RepID=Q9XZU9_DROSU
Length = 1889
Score = 107 bits (266), Expect = 9e-22
Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SPSYSPTSP YSPSSP+YSP+SP + +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 103 bits (258), Expect = 7e-21
Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S +SP YSP+SP ++P+T
Sbjct: 1667 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPAT 1726
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744
Score = 91.3 bits (225), Expect = 5e-17
Identities = 53/110 (48%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
+SPSSP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S
Sbjct: 1708 YSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPS 1767
Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 90.5 bits (223), Expect = 8e-17
Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPN 1625
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 90.1 bits (222), Expect = 1e-16
Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS
Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
PSSPQ SPS TG YSPS YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 89.4 bits (220), Expect = 2e-16
Identities = 55/102 (53%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459
F+P S YSP++ YSPTSP YSPTS PS YSPSS YSP+SP
Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
S TSP YSPSSP +SP S YSPS P YSP+S + YTP T
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPN-YTPAT 1726
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 87.8 bits (216), Expect = 6e-16
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP
Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692
Query: 458 YNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SPS+ YSP+ P Y+P +T Y+P + + P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1740
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 86.3 bits (212), Expect = 2e-15
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813
Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885
Query: 407 PS 402
S
Sbjct: 1886 ES 1887
Score = 65.9 bits (159), Expect = 2e-09
Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 19/98 (19%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSP 1577
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++ S+ YSPS P YSP+S P
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615
[131][TOP]
>UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis
RepID=Q9XZS2_DROMD
Length = 1889
Score = 107 bits (266), Expect = 9e-22
Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SPSYSPTSP YSPSSP+YSP+SP + +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 103 bits (258), Expect = 7e-21
Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S +SP YSP+SP ++P+T
Sbjct: 1667 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPAT 1726
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744
Score = 91.3 bits (225), Expect = 5e-17
Identities = 53/110 (48%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
+SPSSP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S
Sbjct: 1708 YSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPS 1767
Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 90.5 bits (223), Expect = 8e-17
Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPN 1625
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 90.1 bits (222), Expect = 1e-16
Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS
Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
PSSPQ SPS TG YSPS YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 89.4 bits (220), Expect = 2e-16
Identities = 55/102 (53%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459
F+P S YSP++ YSPTSP YSPTS PS YSPSS YSP+SP
Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
S TSP YSPSSP +SP S YSPS P YSP+S + YTP T
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPN-YTPAT 1726
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 87.8 bits (216), Expect = 6e-16
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP
Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692
Query: 458 YNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SPS+ YSP+ P Y+P +T Y+P + + P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1740
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 86.3 bits (212), Expect = 2e-15
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813
Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885
Query: 407 PS 402
S
Sbjct: 1886 ES 1887
Score = 65.9 bits (159), Expect = 2e-09
Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 19/98 (19%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSP 1577
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++ S+ YSPS P YSP+S P
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615
[132][TOP]
>UniRef100_Q5EXZ8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Periplaneta
americana RepID=Q5EXZ8_PERAM
Length = 97
Score = 107 bits (266), Expect = 9e-22
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 10/83 (12%)
Frame = -2
Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
+SPSSP YSP+SPSYSPTSP+YSPTSP YSPSS YSP+SP + TSP+YSP
Sbjct: 8 YSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTPTSPNYSP 67
Query: 425 SSPQFSPST-GYSPSQPGYSPSS 360
SSP +SP+ GYSP+ P YSP+S
Sbjct: 68 SSPTYSPAVPGYSPTSPTYSPTS 90
Score = 100 bits (249), Expect = 8e-20
Identities = 53/89 (59%), Positives = 67/89 (75%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP-YSPTSPS--------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
+SP+SP YSP+SP YSP+SPSYSPTSP+YSP+SP YSPSS S TSP Y+P
Sbjct: 1 YSPTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTP 60
Query: 425 SSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
+SP +SPS+ YSP+ PGYSP+S + Y+P
Sbjct: 61 TSPNYSPSSPTYSPAVPGYSPTSPT-YSP 88
Score = 85.9 bits (211), Expect = 2e-15
Identities = 43/70 (61%), Positives = 56/70 (80%), Gaps = 2/70 (2%)
Frame = -2
Query: 539 YSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSP 366
YSPTSPSYSP+SP ++PS+ T YSPSSP S TSP YSP+SPQ+SPS+ YSP+ P Y+P
Sbjct: 1 YSPTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTP 60
Query: 365 SSTSQYTPKT 336
+S + Y+P +
Sbjct: 61 TSPN-YSPSS 69
Score = 85.1 bits (209), Expect = 4e-15
Identities = 39/57 (68%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
+SP+SP YSP+S YSPTSP+Y+PTSP+YSPSSPTYSP+ P S TSP YSP+SP +
Sbjct: 37 YSPTSPQYSPSSSKYSPTSPTYTPTSPNYSPSSPTYSPAVPGYSPTSPTYSPTSPAY 93
[133][TOP]
>UniRef100_B4R347 RNA polymerase II 215kD subunit n=1 Tax=Drosophila simulans
RepID=B4R347_DROSI
Length = 552
Score = 106 bits (264), Expect = 1e-21
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T
Sbjct: 330 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 389
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S QY+P
Sbjct: 390 PSYSPTSPNYSAS--PQYSP 407
Score = 105 bits (263), Expect = 2e-21
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 343 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 402
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 403 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 439
Score = 90.5 bits (223), Expect = 8e-17
Identities = 57/111 (51%), Positives = 65/111 (58%), Gaps = 31/111 (27%)
Frame = -2
Query: 581 RFSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
++SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP Y
Sbjct: 404 QYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY 463
Query: 431 SPSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
SPSSPQ SPS TG YSPS YSP+S + YTP
Sbjct: 464 SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 513
Score = 90.1 bits (222), Expect = 1e-16
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
+SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S
Sbjct: 371 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 430
Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 431 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 478
Score = 87.0 bits (214), Expect = 9e-16
Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPSS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP
Sbjct: 296 YSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 355
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P
Sbjct: 356 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 403
Score = 86.3 bits (212), Expect = 2e-15
Identities = 48/108 (44%), Positives = 59/108 (54%), Gaps = 28/108 (25%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-------------SGTSPD 435
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S TSP
Sbjct: 430 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 489
Query: 434 YSPSSPQFSPST---------------GYSPSQPGYSPSSTSQYTPKT 336
YSP+ +SPS+ YSP+ P YSP++ S Y+PK+
Sbjct: 490 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKS 537
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 12/90 (13%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPY-----NSGTSPDYS 429
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + T+P+++
Sbjct: 231 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPRYASTTPNFN 290
Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P S +SP S+GYSP+ PGYSP++ Q +P
Sbjct: 291 PQSTGYSPSSSGYSPTSPGYSPTAQFQSSP 320
Score = 82.0 bits (201), Expect = 3e-14
Identities = 48/97 (49%), Positives = 59/97 (60%), Gaps = 23/97 (23%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSP-------------TSPSYSPSSPTYSPSSPYNSGT 444
++SP+SP YSPTSP YSP+SP +SP TSP YSP+ YSPSS S T
Sbjct: 448 QYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 507
Query: 443 SP-------DYSPSSPQFSPS--TGYSPSQPGYSPSS 360
SP +YSP+SP +SP+ + YSP P YSPSS
Sbjct: 508 SPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSS 544
Score = 77.4 bits (189), Expect = 7e-13
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 40/121 (33%)
Frame = -2
Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSP--------------------- 480
+SP+SP Y+ T+P+++P S YSP+S YSP+SP
Sbjct: 270 YSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNI 329
Query: 479 ------------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPK 339
YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+S + YTP
Sbjct: 330 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPV 388
Query: 338 T 336
T
Sbjct: 389 T 389
Score = 77.0 bits (188), Expect = 1e-12
Identities = 47/96 (48%), Positives = 54/96 (56%), Gaps = 20/96 (20%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP----- 405
SSP SP PS SP P+ SPSYSP+SP Y+ SSP G SP+YSPSSP +SP
Sbjct: 221 SSPSSP-GPSMSPYFPASPSVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLY 277
Query: 404 ---------------STGYSPSQPGYSPSSTSQYTP 342
STGYSPS GYSP+S Y+P
Sbjct: 278 ASPRYASTTPNFNPQSTGYSPSSSGYSPTSPG-YSP 312
Score = 74.3 bits (181), Expect = 6e-12
Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F
Sbjct: 489 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSSPTFE 548
Query: 407 PS 402
S
Sbjct: 549 ES 550
Score = 67.0 bits (162), Expect = 1e-09
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 183 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 242
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTPK 339
YSP+SP ++ S+ YSPS P YSP+S +P+
Sbjct: 243 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPR 281
[134][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IK28_DROSE
Length = 1887
Score = 106 bits (264), Expect = 1e-21
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T
Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S QY+P
Sbjct: 1725 PSYSPTSPNYSAS--PQYSP 1742
Score = 105 bits (263), Expect = 2e-21
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1738 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1774
Score = 90.5 bits (223), Expect = 8e-17
Identities = 57/111 (51%), Positives = 65/111 (58%), Gaps = 31/111 (27%)
Frame = -2
Query: 581 RFSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
++SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP Y
Sbjct: 1739 QYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY 1798
Query: 431 SPSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
SPSSPQ SPS TG YSPS YSP+S + YTP
Sbjct: 1799 SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1848
Score = 90.1 bits (222), Expect = 1e-16
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
+SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S
Sbjct: 1706 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 1765
Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP
Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830
Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1870
Score = 87.0 bits (214), Expect = 9e-16
Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPSS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP
Sbjct: 1631 YSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 1690
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P
Sbjct: 1691 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1738
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+
Sbjct: 1806 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1865
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1866 SHYSPTSPAYSPSS 1879
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 12/90 (13%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPY-----NSGTSPDYS 429
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + T+P+++
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPRYASTTPNFN 1625
Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P S +SP S+GYSP+ PGYSP++ Q +P
Sbjct: 1626 PQSTGYSPSSSGYSPTSPGYSPTAQFQSSP 1655
Score = 77.4 bits (189), Expect = 7e-13
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 40/121 (33%)
Frame = -2
Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSP--------------------- 480
+SP+SP Y+ T+P+++P S YSP+S YSP+SP
Sbjct: 1605 YSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNI 1664
Query: 479 ------------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPK 339
YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+S + YTP
Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPV 1723
Query: 338 T 336
T
Sbjct: 1724 T 1724
Score = 77.0 bits (188), Expect = 1e-12
Identities = 47/96 (48%), Positives = 54/96 (56%), Gaps = 20/96 (20%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP----- 405
SSP SP PS SP P+ SPSYSP+SP Y+ SSP G SP+YSPSSP +SP
Sbjct: 1556 SSPSSP-GPSMSPYFPASPSVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLY 1612
Query: 404 ---------------STGYSPSQPGYSPSSTSQYTP 342
STGYSPS GYSP+S Y+P
Sbjct: 1613 ASPRYASTTPNFNPQSTGYSPSSSGYSPTSPG-YSP 1647
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F
Sbjct: 1824 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1883
Query: 407 PS 402
S
Sbjct: 1884 ES 1885
Score = 67.0 bits (162), Expect = 1e-09
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTPK 339
YSP+SP ++ S+ YSPS P YSP+S +P+
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616
[135][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A9UNH9_DROME
Length = 1887
Score = 106 bits (264), Expect = 1e-21
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T
Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S QY+P
Sbjct: 1725 PSYSPTSPNYSAS--PQYSP 1742
Score = 105 bits (263), Expect = 2e-21
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1738 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1774
Score = 91.7 bits (226), Expect = 4e-17
Identities = 58/120 (48%), Positives = 67/120 (55%), Gaps = 31/120 (25%)
Frame = -2
Query: 581 RFSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
++SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP Y
Sbjct: 1739 QYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY 1798
Query: 431 SPSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SPSSPQ SPS TG YSPS YSP+S + YTP + P
Sbjct: 1799 SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTPTARNYSPTP 1857
Score = 90.1 bits (222), Expect = 1e-16
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
+SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S
Sbjct: 1706 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 1765
Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813
Score = 89.4 bits (220), Expect = 2e-16
Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSP 417
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+
Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830
Query: 416 QFSPST---------------GYSPSQPGYSPSSTSQYTP 342
+SPS+ YSP+ P YSP++ S Y+P
Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSP 1870
Score = 86.3 bits (212), Expect = 2e-15
Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPSS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP
Sbjct: 1631 YSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 1690
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P
Sbjct: 1691 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1738
Score = 85.1 bits (209), Expect = 4e-15
Identities = 41/74 (55%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+ P +SP+
Sbjct: 1806 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAP 1865
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1866 SHYSPTSPAYSPSS 1879
Score = 84.0 bits (206), Expect = 8e-15
Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 7/79 (8%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYA--SPRYASTTPN 1623
Query: 413 FSP-STGYSPSQPGYSPSS 360
F+P STGYSPS GYSP+S
Sbjct: 1624 FNPQSTGYSPSSSGYSPTS 1642
Score = 77.4 bits (189), Expect = 7e-13
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 40/121 (33%)
Frame = -2
Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSP--------------------- 480
+SP+SP Y+ T+P+++P S YSP+S YSP+SP
Sbjct: 1605 YSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNI 1664
Query: 479 ------------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPK 339
YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+S + YTP
Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPV 1723
Query: 338 T 336
T
Sbjct: 1724 T 1724
Score = 74.7 bits (182), Expect = 5e-12
Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+ P YSP++P + S TSP YSPSSP F
Sbjct: 1824 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSSPTFE 1883
Query: 407 PS 402
S
Sbjct: 1884 ES 1885
Score = 67.0 bits (162), Expect = 1e-09
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTPK 339
YSP+SP ++ S+ YSPS P YSP+S +P+
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616
[136][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
melanogaster RepID=RPB1_DROME
Length = 1887
Score = 106 bits (264), Expect = 1e-21
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T
Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S QY+P
Sbjct: 1725 PSYSPTSPNYSAS--PQYSP 1742
Score = 105 bits (263), Expect = 2e-21
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1738 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1774
Score = 90.5 bits (223), Expect = 8e-17
Identities = 57/111 (51%), Positives = 65/111 (58%), Gaps = 31/111 (27%)
Frame = -2
Query: 581 RFSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
++SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP Y
Sbjct: 1739 QYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY 1798
Query: 431 SPSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
SPSSPQ SPS TG YSPS YSP+S + YTP
Sbjct: 1799 SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1848
Score = 90.1 bits (222), Expect = 1e-16
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
+SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S
Sbjct: 1706 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 1765
Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP
Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830
Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1870
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+
Sbjct: 1806 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1865
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1866 SHYSPTSPAYSPSS 1879
Score = 86.3 bits (212), Expect = 2e-15
Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPSS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP
Sbjct: 1631 YSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 1690
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P
Sbjct: 1691 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1738
Score = 84.0 bits (206), Expect = 8e-15
Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 7/79 (8%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYA--SPRYASTTPN 1623
Query: 413 FSP-STGYSPSQPGYSPSS 360
F+P STGYSPS GYSP+S
Sbjct: 1624 FNPQSTGYSPSSSGYSPTS 1642
Score = 77.4 bits (189), Expect = 7e-13
Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 40/121 (33%)
Frame = -2
Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSP--------------------- 480
+SP+SP Y+ T+P+++P S YSP+S YSP+SP
Sbjct: 1605 YSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNI 1664
Query: 479 ------------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPK 339
YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+S + YTP
Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPV 1723
Query: 338 T 336
T
Sbjct: 1724 T 1724
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F
Sbjct: 1824 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1883
Query: 407 PS 402
S
Sbjct: 1884 ES 1885
Score = 67.0 bits (162), Expect = 1e-09
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTPK 339
YSP+SP ++ S+ YSPS P YSP+S +P+
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616
[137][TOP]
>UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS
Length = 1811
Score = 105 bits (263), Expect = 2e-21
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1602 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1661
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1662 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1698
Score = 105 bits (262), Expect = 3e-21
Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T
Sbjct: 1589 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1648
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S Y+P
Sbjct: 1649 PSYSPTSPNYSAS--PHYSP 1666
Score = 95.5 bits (236), Expect = 3e-18
Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 18/97 (18%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-- 408
+SPSSP YSPTSP YSPTSPSYSPTSP+Y+P++P+YSP+SP N SP YSP+SP +S
Sbjct: 1616 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQT 1674
Query: 407 -------------PSTGY--SPSQPGYSPSSTSQYTP 342
PS Y SP P Y+P S QY+P
Sbjct: 1675 GAKYSPTSPTYSPPSPSYDGSPGSPQYTPGS-PQYSP 1710
Score = 90.9 bits (224), Expect = 7e-17
Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1488 SPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPN 1547
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1548 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1574
Score = 90.1 bits (222), Expect = 1e-16
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426
+SP+SP YSP SP+YS T YSPTSP+YSP SP+Y SP SP + SP YSP
Sbjct: 1651 YSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1710
Query: 425 SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1711 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1737
Score = 90.1 bits (222), Expect = 1e-16
Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS
Sbjct: 1664 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1723
Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
PSSPQ SPS TG YSPS YSP+S + YTP
Sbjct: 1724 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1772
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP
Sbjct: 1695 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1754
Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1755 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1794
Score = 88.2 bits (217), Expect = 4e-16
Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459
F+P S YSP++ YSPTSP YSPTS PS YSPSS YSP+SP
Sbjct: 1548 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1607
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
S TSP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1608 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1648
Score = 87.0 bits (214), Expect = 9e-16
Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP
Sbjct: 1555 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1614
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SP S YSP+ P Y+P +T Y+P + + P
Sbjct: 1615 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1662
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+
Sbjct: 1730 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1789
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1790 SHYSPTSPAYSPSS 1803
Score = 86.3 bits (212), Expect = 2e-15
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+
Sbjct: 1677 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1735
Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ YSPSST +Y+P
Sbjct: 1736 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1765
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F
Sbjct: 1748 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1807
Query: 407 PS 402
S
Sbjct: 1808 ES 1809
Score = 65.5 bits (158), Expect = 3e-09
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 1440 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSP 1499
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360
YSP+SP ++ S+ YSPS P YSP+S
Sbjct: 1500 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1531
[138][TOP]
>UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche
RepID=Q9XZS1_DROGU
Length = 1889
Score = 105 bits (263), Expect = 2e-21
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 105 bits (262), Expect = 3e-21
Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T
Sbjct: 1667 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744
Score = 95.5 bits (236), Expect = 3e-18
Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 18/97 (18%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-- 408
+SPSSP YSPTSP YSPTSPSYSPTSP+Y+P++P+YSP+SP N SP YSP+SP +S
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQT 1752
Query: 407 -------------PSTGY--SPSQPGYSPSSTSQYTP 342
PS Y SP P Y+P S QY+P
Sbjct: 1753 GAKYSPTSPTYSPPSPSYDGSPGSPQYTPGS-PQYSP 1788
Score = 90.5 bits (223), Expect = 8e-17
Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPN 1625
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 90.1 bits (222), Expect = 1e-16
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426
+SP+SP YSP SP+YS T YSPTSP+YSP SP+Y SP SP + SP YSP
Sbjct: 1729 YSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1788
Query: 425 SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1789 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 90.1 bits (222), Expect = 1e-16
Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS
Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
PSSPQ SPS TG YSPS YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 88.2 bits (217), Expect = 4e-16
Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459
F+P S YSP++ YSPTSP YSPTS PS YSPSS YSP+SP
Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
S TSP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1726
Score = 87.0 bits (214), Expect = 9e-16
Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP
Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SP S YSP+ P Y+P +T Y+P + + P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1740
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 86.3 bits (212), Expect = 2e-15
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813
Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885
Query: 407 PS 402
S
Sbjct: 1886 ES 1887
Score = 65.9 bits (159), Expect = 2e-09
Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 19/98 (19%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSP 1577
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++ S+ YSPS P YSP+S P
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615
[139][TOP]
>UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29IN2_DROPS
Length = 1889
Score = 105 bits (263), Expect = 2e-21
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 105 bits (262), Expect = 3e-21
Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T
Sbjct: 1667 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744
Score = 95.5 bits (236), Expect = 3e-18
Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 18/97 (18%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-- 408
+SPSSP YSPTSP YSPTSPSYSPTSP+Y+P++P+YSP+SP N SP YSP+SP +S
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQT 1752
Query: 407 -------------PSTGY--SPSQPGYSPSSTSQYTP 342
PS Y SP P Y+P S QY+P
Sbjct: 1753 GAKYSPTSPTYSPPSPSYDGSPGSPQYTPGS-PQYSP 1788
Score = 90.9 bits (224), Expect = 7e-17
Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPN 1625
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652
Score = 90.1 bits (222), Expect = 1e-16
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426
+SP+SP YSP SP+YS T YSPTSP+YSP SP+Y SP SP + SP YSP
Sbjct: 1729 YSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1788
Query: 425 SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1789 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 90.1 bits (222), Expect = 1e-16
Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS
Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
PSSPQ SPS TG YSPS YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 88.2 bits (217), Expect = 4e-16
Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459
F+P S YSP++ YSPTSP YSPTS PS YSPSS YSP+SP
Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
S TSP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1726
Score = 87.0 bits (214), Expect = 9e-16
Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP
Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SP S YSP+ P Y+P +T Y+P + + P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1740
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 86.3 bits (212), Expect = 2e-15
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813
Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885
Query: 407 PS 402
S
Sbjct: 1886 ES 1887
Score = 65.5 bits (158), Expect = 3e-09
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSP 1577
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360
YSP+SP ++ S+ YSPS P YSP+S
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609
[140][TOP]
>UniRef100_C6F1E9 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1E9_PLAVI
Length = 225
Score = 105 bits (263), Expect = 2e-21
Identities = 51/75 (68%), Positives = 60/75 (80%), Gaps = 3/75 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 62 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSP 121
Query: 404 STGY--SPSQPGYSP 366
S+ +PS P YSP
Sbjct: 122 SSPVPNNPSSPHYSP 136
Score = 102 bits (253), Expect = 3e-20
Identities = 51/81 (62%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP
Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 115
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSPS P + S+ Y+P
Sbjct: 116 SPQYSPSSPVPNNPSSPHYSP 136
Score = 101 bits (252), Expect = 4e-20
Identities = 50/79 (63%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112
Query: 392 SPSQPGYSPSSTSQYTPKT 336
SP+ P YSPSS P +
Sbjct: 113 SPTSPQYSPSSPVPNNPSS 131
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/96 (53%), Positives = 63/96 (65%), Gaps = 15/96 (15%)
Frame = -2
Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
+SP+SP +S SP YS TSP YSPTSP YSP+SP YSP+SP S TS
Sbjct: 29 YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 88
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
P YSP+SP++SP S YSP+ P YSP+S QY+P +
Sbjct: 89 PKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSPSS 123
Score = 82.8 bits (203), Expect = 2e-14
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP P++P +SP YSP +SP+
Sbjct: 90 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 143
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
FSP S YS S P Y S ++
Sbjct: 144 FSPTSPAYSISSPVYDQSGNAR 165
[141][TOP]
>UniRef100_C6F0A2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A2_PLAFA
Length = 223
Score = 105 bits (263), Expect = 2e-21
Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP
Sbjct: 40 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 99
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S +Y+P
Sbjct: 100 SPKYSPTSPKYSPTS-PKYSP 119
Score = 100 bits (250), Expect = 6e-20
Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 96
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S +Y+P
Sbjct: 97 SPTSPKYSPTS-PKYSP 112
Score = 100 bits (249), Expect = 8e-20
Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP
Sbjct: 60 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 119
Query: 404 ST--GYSPSQPGYSPSS 360
++ + + P YSP S
Sbjct: 120 TSPVAQNIASPNYSPYS 136
Score = 94.4 bits (233), Expect = 6e-18
Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S +Y+P
Sbjct: 90 SPTSPKYSPTS-PKYSP 105
Score = 92.4 bits (228), Expect = 2e-17
Identities = 50/89 (56%), Positives = 62/89 (69%), Gaps = 9/89 (10%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSP 426
++SP+SP YSPTSP YSPTSP YSPTSP YS P+SP YSP+SP S TSP YSP
Sbjct: 46 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 105
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP++SP S YSP+ P ++ Y+P
Sbjct: 106 TSPKYSPTSPKYSPTSPVAQNIASPNYSP 134
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S TSP
Sbjct: 88 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 147
Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330
YS SSP + S + P P Y S Q D
Sbjct: 148 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 186
Score = 76.3 bits (186), Expect = 2e-12
Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 12/85 (14%)
Frame = -2
Query: 560 YSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
YSPTSP+Y+ + YSPTSP Y+ SP YS +SP S TSP YSP+SP+
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S YSP+ P YSP+S +Y+P
Sbjct: 61 YSPTSPKYSPTSPKYSPTS-PKYSP 84
[142][TOP]
>UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PY98_DROYA
Length = 1889
Score = 105 bits (263), Expect = 2e-21
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 104 bits (259), Expect = 6e-21
Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T
Sbjct: 1667 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744
Score = 90.5 bits (223), Expect = 8e-17
Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 7/88 (7%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPN 1625
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
F+P STGYSPS GYSP+S Y+P N
Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTPN 1652
Score = 90.1 bits (222), Expect = 1e-16
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
+SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S
Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767
Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 90.1 bits (222), Expect = 1e-16
Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
PSSPQ SPS TG YSPS YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 86.3 bits (212), Expect = 2e-15
Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPSS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP
Sbjct: 1633 YSPSSSGYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 1692
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1740
Score = 86.3 bits (212), Expect = 2e-15
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813
Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 77.4 bits (189), Expect = 7e-13
Identities = 56/149 (37%), Positives = 66/149 (44%), Gaps = 68/149 (45%)
Frame = -2
Query: 578 FSPSSP-------------YSPTSPSYSPTSP---------------------------- 522
+SP+SP YSP+SP+YSPTSP
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSS 1638
Query: 521 SYSPTSP--------------------------SYSPSSPTYSPSSPYNSGTSPDYSPSS 420
YSPTSP +YSPSS YSP+SP S TSP YSPSS
Sbjct: 1639 GYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSS 1698
Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
P +SP S YSP+ P YSP+S + YTP T
Sbjct: 1699 PSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885
Query: 407 PS 402
S
Sbjct: 1886 ES 1887
Score = 65.5 bits (158), Expect = 3e-09
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360
YSP+SP ++ S+ YSPS P YSP+S
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609
[143][TOP]
>UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4H2R8_DROPE
Length = 1804
Score = 105 bits (263), Expect = 2e-21
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1614 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1673
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1674 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1710
Score = 105 bits (262), Expect = 3e-21
Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T
Sbjct: 1601 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1660
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S Y+P
Sbjct: 1661 PSYSPTSPNYSAS--PHYSP 1678
Score = 95.5 bits (236), Expect = 3e-18
Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 18/97 (18%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-- 408
+SPSSP YSPTSP YSPTSPSYSPTSP+Y+P++P+YSP+SP N SP YSP+SP +S
Sbjct: 1628 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQT 1686
Query: 407 -------------PSTGY--SPSQPGYSPSSTSQYTP 342
PS Y SP P Y+P S QY+P
Sbjct: 1687 GAKYSPTSPTYSPPSPSYDGSPGSPQYTPGS-PQYSP 1722
Score = 90.1 bits (222), Expect = 1e-16
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426
+SP+SP YSP SP+YS T YSPTSP+YSP SP+Y SP SP + SP YSP
Sbjct: 1663 YSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1722
Query: 425 SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1723 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1749
Score = 88.2 bits (217), Expect = 4e-16
Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459
F+P S YSP++ YSPTSP YSPTS PS YSPSS YSP+SP
Sbjct: 1560 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1619
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
S TSP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1620 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1660
Score = 87.0 bits (214), Expect = 9e-16
Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP
Sbjct: 1567 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1626
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SP S YSP+ P Y+P +T Y+P + + P
Sbjct: 1627 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1674
Score = 86.3 bits (212), Expect = 2e-15
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+
Sbjct: 1689 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1747
Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ YSPSST +Y+P
Sbjct: 1748 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1777
Score = 84.0 bits (206), Expect = 8e-15
Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQ 414
SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP+
Sbjct: 1701 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1760
Query: 413 FSPSTG-YSPSQPGYSPSSTSQYTP 342
+SP+ YSPS YSP+S + YTP
Sbjct: 1761 YSPNMSIYSPSSTKYSPTSPT-YTP 1784
Score = 81.3 bits (199), Expect = 5e-14
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 8/89 (8%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS---- 408
S + P +P SPSYSPTSP+Y+ +SP +SP YSPSSP S TSP Y+ +SP+++
Sbjct: 1501 SMTPPMTPVSPSYSPTSPNYTASSPG--GASPNYSPSSPNYSPTSPLYAAASPRYASTTP 1558
Query: 407 ----PSTGYSPSQPGYSPSSTSQYTPKTN 333
STGYSPS GYSP+S Y+P +N
Sbjct: 1559 NFNPQSTGYSPSASGYSPTS-PVYSPTSN 1586
Score = 75.9 bits (185), Expect = 2e-12
Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSP+SP +SP S YSP+ TYS +SP S YSPSS ++SP
Sbjct: 1719 QYSPASPKYSPTSPLYSPSSPQHSP-SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSP 1777
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S Y+P+ YSP+S Y+P
Sbjct: 1778 TSPTYTPTARNYSPTSL-MYSP 1798
Score = 68.6 bits (166), Expect = 3e-10
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+S +SP+
Sbjct: 1742 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSLMYSPT 1799
[144][TOP]
>UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NUC1_DROER
Length = 1889
Score = 105 bits (263), Expect = 2e-21
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 104 bits (260), Expect = 4e-21
Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP++ YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T
Sbjct: 1667 YSPANAYSPSSANYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744
Score = 90.1 bits (222), Expect = 1e-16
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
+SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S
Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767
Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 90.1 bits (222), Expect = 1e-16
Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
PSSPQ SPS TG YSPS YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 89.0 bits (219), Expect = 2e-16
Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 7/79 (8%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPN 1625
Query: 413 FSP-STGYSPSQPGYSPSS 360
F+P STGYSPS GYSP+S
Sbjct: 1626 FNPQSTGYSPSSSGYSPTS 1644
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 86.3 bits (212), Expect = 2e-15
Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPSS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP
Sbjct: 1633 YSPSSSGYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPANAYSPSSANYSPNSPSYSPTSP 1692
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1740
Score = 86.3 bits (212), Expect = 2e-15
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813
Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 77.4 bits (189), Expect = 7e-13
Identities = 56/149 (37%), Positives = 66/149 (44%), Gaps = 68/149 (45%)
Frame = -2
Query: 578 FSPSSP-------------YSPTSPSYSPTSP---------------------------- 522
+SP+SP YSP+SP+YSPTSP
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSS 1638
Query: 521 SYSPTSP--------------------------SYSPSSPTYSPSSPYNSGTSPDYSPSS 420
YSPTSP +YSPSS YSP+SP S TSP YSPSS
Sbjct: 1639 GYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPANAYSPSSANYSPNSPSYSPTSPSYSPSS 1698
Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
P +SP S YSP+ P YSP+S + YTP T
Sbjct: 1699 PSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885
Query: 407 PS 402
S
Sbjct: 1886 ES 1887
Score = 65.5 bits (158), Expect = 3e-09
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360
YSP+SP ++ S+ YSPS P YSP+S
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609
[145][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MQ29_DROAN
Length = 1889
Score = 105 bits (263), Expect = 2e-21
Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 104 bits (259), Expect = 6e-21
Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T
Sbjct: 1667 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744
Score = 92.4 bits (228), Expect = 2e-17
Identities = 50/88 (56%), Positives = 64/88 (72%), Gaps = 7/88 (7%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + TSP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYATTSPRYASTTPN 1625
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTSN 1652
Score = 90.1 bits (222), Expect = 1e-16
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
+SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S
Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767
Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 90.1 bits (222), Expect = 1e-16
Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
PSSPQ SPS TG YSPS YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 89.0 bits (219), Expect = 2e-16
Identities = 55/102 (53%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTS-----PS--------------YSPSSPTYSPSSP 459
F+P S YSP+S YSPTSP YSPTS PS YSPSS YSP+SP
Sbjct: 1626 FNPQSTGYSPSSSGYSPTSPVYSPTSNYQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSP 1685
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
S TSP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 86.3 bits (212), Expect = 2e-15
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813
Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 83.2 bits (204), Expect = 1e-14
Identities = 49/93 (52%), Positives = 58/93 (62%), Gaps = 14/93 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP-----SSP 417
+SPSSP YSPTSP Y+ TSP Y+ T+P+++P S YSPSS S TSP YSP SSP
Sbjct: 1598 YSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQSSP 1657
Query: 416 QF--------SPSTGYSPSQPGYSPSSTSQYTP 342
F SP YSPS YSP+S S Y+P
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSSNYSPNSPS-YSP 1689
Score = 77.8 bits (190), Expect = 6e-13
Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 13/92 (14%)
Frame = -2
Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438
+SP+SP YSP+SP+YSPTSP Y+ TSP Y+ ++P ++P S S +S
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSS 1638
Query: 437 DYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
YSP+SP +SP++ Y S P ++ S ++ Y+P
Sbjct: 1639 GYSPTSPVYSPTSNYQ-SSPSFAGSGSNMYSP 1669
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885
Query: 407 PS 402
S
Sbjct: 1886 ES 1887
Score = 65.5 bits (158), Expect = 3e-09
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360
YSP+SP ++ S+ YSPS P YSP+S
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609
[146][TOP]
>UniRef100_Q84KP6 DNA-directed RNA polymerase n=1 Tax=Cyanidioschyzon merolae
RepID=Q84KP6_CYAME
Length = 1819
Score = 105 bits (261), Expect = 3e-21
Identities = 55/89 (61%), Positives = 68/89 (76%), Gaps = 8/89 (8%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+SP+SP SPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP
Sbjct: 1636 YSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1695
Query: 404 ST---GYSPSQP--GYSPSSTS-QYTPKT 336
S+ YSPS P YSPSS + Y+P +
Sbjct: 1696 SSPNVAYSPSSPNVAYSPSSPNVAYSPSS 1724
Score = 86.3 bits (212), Expect = 2e-15
Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 10/90 (11%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSY--------SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
SP+ + T ++SP+SP+Y SPTSP+YSP+SP YSP+SP S TSP YSP+S
Sbjct: 1617 SPAGGGTGTLGAFSPSSPAYSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1676
Query: 419 PQFSP-STGYSPSQPGYSPSSTS-QYTPKT 336
P +SP S YSP+ P YSPSS + Y+P +
Sbjct: 1677 PAYSPTSPAYSPTSPAYSPSSPNVAYSPSS 1706
Score = 85.9 bits (211), Expect = 2e-15
Identities = 56/102 (54%), Positives = 66/102 (64%), Gaps = 21/102 (20%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPD---- 435
+SP+SP YSPTSP+YSPTSP+YSPTSP+YS P+SP YSPSSP N SP
Sbjct: 1651 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSP-NVAYSPSSPNV 1709
Query: 434 -YSPSSPQF-----SPSTGYSPSQP--GYSPSSTS-QYTPKT 336
YSPSSP SP+ YSPS P YSPSS + Y+P +
Sbjct: 1710 AYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSS 1751
Score = 83.2 bits (204), Expect = 1e-14
Identities = 56/116 (48%), Positives = 65/116 (56%), Gaps = 35/116 (30%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPS--------------------YSPSSP--TYSP 468
+SP+SP YSPTSP+YSPTSP+YSP+SP+ YSPSSP YSP
Sbjct: 1672 YSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSP 1731
Query: 467 SSPYNSGTSPD-----YSPSSPQF-----SPSTGYSPSQP--GYSPSSTSQYTPKT 336
SSP N SP YSPSSP SP+ YSPS P YSPSS Y+P +
Sbjct: 1732 SSP-NVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSS 1786
Score = 72.8 bits (177), Expect = 2e-11
Identities = 56/107 (52%), Positives = 68/107 (63%), Gaps = 27/107 (25%)
Frame = -2
Query: 578 FSPSSP---YSPTSPS--YSPTSPS--YSPTSPS--YSPSSPT--YSPSSPY--NSGTSP 438
+SPSSP YSP+SP+ YSP+SP+ YSP+SP+ YSPSSP YSPSSP S +SP
Sbjct: 1711 YSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSP 1770
Query: 437 D--YSPSSP----QFSPSTGYSPSQP--GYSPS------STSQYTPK 339
+ YSPSSP SP+ YSPS P YSPS S+ Y+PK
Sbjct: 1771 NVAYSPSSPVAYSPSSPNVAYSPSSPNVAYSPSSPAFSPSSPVYSPK 1817
Score = 69.3 bits (168), Expect = 2e-10
Identities = 49/87 (56%), Positives = 60/87 (68%), Gaps = 14/87 (16%)
Frame = -2
Query: 578 FSPSSP---YSPTSPS--YSPTSPS--YSPTSPS--YSPSSPT-YSPSSPY--NSGTSPD 435
+SPSSP YSP+SP+ YSP+SP+ YSP+SP+ YSPSSP YSPSSP S +SP+
Sbjct: 1738 YSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSSPNVAYSPSSPN 1797
Query: 434 --YSPSSPQFSPSTGYSPSQPGYSPSS 360
YSPSSP FSPS+ P YSP +
Sbjct: 1798 VAYSPSSPAFSPSS------PVYSPKN 1818
Score = 54.7 bits (130), Expect = 5e-06
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
+SP++ S S S T+P+++P T ++SPSSP YSP+SP SP+SP
Sbjct: 1599 TSPFA--SFSASATTPNWAPSPAGGGTGTLGAFSPSSPAYSPTSPRL------VSPTSPA 1650
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S YSP+ P YSP+S + Y+P
Sbjct: 1651 YSPTSPAYSPTSPAYSPTSPA-YSP 1674
[147][TOP]
>UniRef100_C6HNU4 DNA-directed RNA polymerase II n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HNU4_AJECH
Length = 668
Score = 105 bits (261), Expect = 3e-21
Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 12/99 (12%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SPS SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP STG
Sbjct: 545 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 604
Query: 395 ------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
Y+P+ PG+SP+S Y+P + + P
Sbjct: 605 RHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 643
Score = 92.4 bits (228), Expect = 2e-17
Identities = 49/96 (51%), Positives = 66/96 (68%), Gaps = 16/96 (16%)
Frame = -2
Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSG 447
R+SPSS YSPTSP +SP SP+++PTSP+YSP+SP+Y SP+SP S
Sbjct: 500 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSP 559
Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
TSP +SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 560 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 594
Score = 89.0 bits (219), Expect = 2e-16
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP
Sbjct: 564 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPG 623
Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
S TSP+ YSP+SP F SP++ P+ PGYSP+S
Sbjct: 624 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 658
Score = 86.7 bits (213), Expect = 1e-15
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 36/112 (32%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPD 435
+SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP S TSP
Sbjct: 557 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK 616
Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351
Y+P+SP +SP S GYSP+ P ++P S Q
Sbjct: 617 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 668
Score = 66.6 bits (161), Expect = 1e-09
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP SP YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP
Sbjct: 474 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 530
Query: 404 STGYSPSQPGYSPSSTSQYTPKTN 333
S ++P+ P YSP+S S T+
Sbjct: 531 SPAFAPTSPAYSPTSPSYQQSPTS 554
Score = 55.5 bits (132), Expect = 3e-06
Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 10/51 (19%)
Frame = -2
Query: 581 RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSP 459
+++P+SP +SPTSP +YSPTSP++S PTSP YSP+SPT++P SP
Sbjct: 616 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISP 666
[148][TOP]
>UniRef100_C1GHL1 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1GHL1_PARBD
Length = 1746
Score = 105 bits (261), Expect = 3e-21
Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
Frame = -2
Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP
Sbjct: 1620 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1679
Query: 407 PSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
STG Y+P+ PG+SP+S Y+P + + P
Sbjct: 1680 GSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1722
Score = 90.1 bits (222), Expect = 1e-16
Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 23/97 (23%)
Frame = -2
Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSY---------SPSSPTYSP 468
R+SPSS YSPTSP +SP SP ++PTSP+Y SP+SP+YSP
Sbjct: 1579 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSP 1638
Query: 467 SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
+SP S TSP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1639 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1675
Score = 89.0 bits (219), Expect = 2e-16
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP
Sbjct: 1643 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPG 1702
Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
S TSP+ YSP+SP F SP++ P+ PGYSP+S
Sbjct: 1703 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1737
Score = 88.2 bits (217), Expect = 4e-16
Identities = 49/109 (44%), Positives = 64/109 (58%), Gaps = 36/109 (33%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435
+SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP G TSP
Sbjct: 1636 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPK 1695
Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPSS 360
Y+P+SP +SP S GYSP+ P +SP+S
Sbjct: 1696 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTS 1744
Score = 81.6 bits (200), Expect = 4e-14
Identities = 51/90 (56%), Positives = 62/90 (68%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGTSPDYSPS 423
+SPSSP+ SPTSP YSP+S YSPTSP S SSP +SP+SP + TSP YSP+
Sbjct: 1565 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPT 1623
Query: 422 SP--QFSP-STGYSPSQPGYSPSSTSQYTP 342
SP Q SP S YSP+ PG+SP+S S Y+P
Sbjct: 1624 SPGYQQSPTSPSYSPTSPGFSPTSPS-YSP 1652
Score = 66.2 bits (160), Expect = 2e-09
Identities = 34/59 (57%), Positives = 42/59 (71%), Gaps = 9/59 (15%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYS--------PSSPYNSGTSPDYSPSSP 417
SP SPTSP Y+PTSP +SPTSP +YSP+SP +S P+SP S TSP +SP+SP
Sbjct: 1687 SPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTSP 1745
Score = 63.9 bits (154), Expect = 9e-09
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
FSP SP YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP+
Sbjct: 1553 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1609
Query: 401 TG-YSPSQPGYSPSS 360
+ ++P+ P YSP+S
Sbjct: 1610 SPVFAPTSPAYSPTS 1624
Score = 59.7 bits (143), Expect = 2e-07
Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 10/56 (17%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSP-SYSPTSPSYS--------PSSPTYSPSSPYNSGTSP 438
SP+SP Y+PTSP +SPTSP +YSPTSP++S P+SP YSP+SP S TSP
Sbjct: 1690 SPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTSP 1745
Score = 58.5 bits (140), Expect = 4e-07
Identities = 29/52 (55%), Positives = 41/52 (78%), Gaps = 10/52 (19%)
Frame = -2
Query: 581 RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSPY 456
+++P+SP +SPTSP +YSPTSP++S PTSP YSP+SPT+SP+SP+
Sbjct: 1695 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTSPH 1746
[149][TOP]
>UniRef100_C0SE75 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SE75_PARBP
Length = 2106
Score = 105 bits (261), Expect = 3e-21
Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
Frame = -2
Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP
Sbjct: 1620 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1679
Query: 407 PSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
STG Y+P+ PG+SP+S Y+P + + P
Sbjct: 1680 GSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1722
Score = 90.1 bits (222), Expect = 1e-16
Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 23/97 (23%)
Frame = -2
Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSY---------SPSSPTYSP 468
R+SPSS YSPTSP +SP SP ++PTSP+Y SP+SP+YSP
Sbjct: 1579 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSP 1638
Query: 467 SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
+SP S TSP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1639 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1675
Score = 89.0 bits (219), Expect = 2e-16
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP
Sbjct: 1643 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPG 1702
Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
S TSP+ YSP+SP F SP++ P+ PGYSP+S
Sbjct: 1703 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1737
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 36/108 (33%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435
+SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP G TSP
Sbjct: 1636 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPK 1695
Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPS 363
Y+P+SP +SP S GYSP+ P +SP+
Sbjct: 1696 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPT 1743
Score = 81.6 bits (200), Expect = 4e-14
Identities = 51/90 (56%), Positives = 62/90 (68%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGTSPDYSPS 423
+SPSSP+ SPTSP YSP+S YSPTSP S SSP +SP+SP + TSP YSP+
Sbjct: 1565 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPT 1623
Query: 422 SP--QFSP-STGYSPSQPGYSPSSTSQYTP 342
SP Q SP S YSP+ PG+SP+S S Y+P
Sbjct: 1624 SPGYQQSPTSPSYSPTSPGFSPTSPS-YSP 1652
Score = 63.9 bits (154), Expect = 9e-09
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
FSP SP YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP+
Sbjct: 1553 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1609
Query: 401 TG-YSPSQPGYSPSS 360
+ ++P+ P YSP+S
Sbjct: 1610 SPVFAPTSPAYSPTS 1624
[150][TOP]
>UniRef100_C0NEY2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NEY2_AJECG
Length = 1234
Score = 105 bits (261), Expect = 3e-21
Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 12/99 (12%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SPS SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP STG
Sbjct: 1111 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 1170
Query: 395 ------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
Y+P+ PG+SP+S Y+P + + P
Sbjct: 1171 RHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1209
Score = 92.4 bits (228), Expect = 2e-17
Identities = 49/96 (51%), Positives = 66/96 (68%), Gaps = 16/96 (16%)
Frame = -2
Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSG 447
R+SPSS YSPTSP +SP SP+++PTSP+YSP+SP+Y SP+SP S
Sbjct: 1066 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSP 1125
Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
TSP +SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 1126 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 1160
Score = 89.0 bits (219), Expect = 2e-16
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP
Sbjct: 1130 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPG 1189
Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
S TSP+ YSP+SP F SP++ P+ PGYSP+S
Sbjct: 1190 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1224
Score = 86.7 bits (213), Expect = 1e-15
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 36/112 (32%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPD 435
+SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP S TSP
Sbjct: 1123 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK 1182
Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351
Y+P+SP +SP S GYSP+ P ++P S Q
Sbjct: 1183 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 1234
Score = 66.6 bits (161), Expect = 1e-09
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP SP YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP
Sbjct: 1040 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1096
Query: 404 STGYSPSQPGYSPSSTSQYTPKTN 333
S ++P+ P YSP+S S T+
Sbjct: 1097 SPAFAPTSPAYSPTSPSYQQSPTS 1120
Score = 55.5 bits (132), Expect = 3e-06
Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 10/51 (19%)
Frame = -2
Query: 581 RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSP 459
+++P+SP +SPTSP +YSPTSP++S PTSP YSP+SPT++P SP
Sbjct: 1182 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISP 1232
[151][TOP]
>UniRef100_A6QYA7 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6QYA7_AJECN
Length = 1747
Score = 105 bits (261), Expect = 3e-21
Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 12/99 (12%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SPS SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP STG
Sbjct: 1624 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 1683
Query: 395 ------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
Y+P+ PG+SP+S Y+P + + P
Sbjct: 1684 RHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1722
Score = 92.4 bits (228), Expect = 2e-17
Identities = 49/96 (51%), Positives = 66/96 (68%), Gaps = 16/96 (16%)
Frame = -2
Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSG 447
R+SPSS YSPTSP +SP SP+++PTSP+YSP+SP+Y SP+SP S
Sbjct: 1579 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSP 1638
Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
TSP +SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 1639 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 1673
Score = 89.0 bits (219), Expect = 2e-16
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP
Sbjct: 1643 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPG 1702
Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
S TSP+ YSP+SP F SP++ P+ PGYSP+S
Sbjct: 1703 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1737
Score = 86.7 bits (213), Expect = 1e-15
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 36/112 (32%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPD 435
+SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP S TSP
Sbjct: 1636 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK 1695
Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351
Y+P+SP +SP S GYSP+ P ++P S Q
Sbjct: 1696 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 1747
Score = 66.6 bits (161), Expect = 1e-09
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP SP YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP
Sbjct: 1553 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1609
Query: 404 STGYSPSQPGYSPSSTSQYTPKTN 333
S ++P+ P YSP+S S T+
Sbjct: 1610 SPAFAPTSPAYSPTSPSYQQSPTS 1633
Score = 55.5 bits (132), Expect = 3e-06
Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 10/51 (19%)
Frame = -2
Query: 581 RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSP 459
+++P+SP +SPTSP +YSPTSP++S PTSP YSP+SPT++P SP
Sbjct: 1695 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISP 1745
[152][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4NDK9_DROWI
Length = 1890
Score = 104 bits (260), Expect = 4e-21
Identities = 50/97 (51%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
++P+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1681 YTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1740
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1741 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1777
Score = 103 bits (256), Expect = 1e-20
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +Y+P SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T
Sbjct: 1668 YSPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1727
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S Y+P
Sbjct: 1728 PSYSPTSPNYSAS--PHYSP 1745
Score = 90.1 bits (222), Expect = 1e-16
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
+SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S
Sbjct: 1709 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1768
Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1769 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1816
Score = 90.1 bits (222), Expect = 1e-16
Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS
Sbjct: 1743 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1802
Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
PSSPQ SPS TG YSPS YSP+S + YTP
Sbjct: 1803 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1851
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP
Sbjct: 1774 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1833
Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1834 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1873
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+
Sbjct: 1809 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1868
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1869 SHYSPTSPAYSPSS 1882
Score = 86.3 bits (212), Expect = 2e-15
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+
Sbjct: 1756 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1814
Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ YSPSST +Y+P
Sbjct: 1815 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1844
Score = 85.9 bits (211), Expect = 2e-15
Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 14/92 (15%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPT-------------SPSYSPSSPTYSPSSPYNSGTSPDYSP 426
SPY PTSPS SPSYSPT SP+YSPSSP YSP+SP + TSP Y+
Sbjct: 1566 SPYFPTSPS---VSPSYSPTSPNYTASSPSGGASPNYSPSSPNYSPTSPLYAATSPRYAS 1622
Query: 425 SSPQFS-PSTGYSPSQPGYSPSSTSQYTPKTN 333
++P F+ STGYSPS GYSP+S Y+P +N
Sbjct: 1623 TTPNFNLQSTGYSPSSSGYSPTS-PVYSPTSN 1653
Score = 85.1 bits (209), Expect = 4e-15
Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPSS YSPTSP YSPTS PS YSP+S +Y+P+SP+YSP+SP
Sbjct: 1634 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSP 1693
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P
Sbjct: 1694 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1741
Score = 84.3 bits (207), Expect = 6e-15
Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 10/98 (10%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
S S YSPTSP+Y+ +SPS YSP+SP+YSP+SP Y+ +SP + T+P+++ S
Sbjct: 1574 SVSPSYSPTSPNYTASSPSGGASPNYSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTG 1633
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPK---TNDNKDDPG 312
+SP S+GYSP+ P YSP+S Q +P + N PG
Sbjct: 1634 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPG 1671
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F
Sbjct: 1827 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1886
Query: 407 PS 402
S
Sbjct: 1887 ES 1888
Score = 75.9 bits (185), Expect = 2e-12
Identities = 52/133 (39%), Positives = 61/133 (45%), Gaps = 55/133 (41%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSP----------------------------SYSPTSP--------- 501
S YSP+SP+YSPTSP YSPTSP
Sbjct: 1596 SPNYSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSSSGYSPTSPVYSPTSNFQ 1655
Query: 500 -----------------SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 375
+YSPSS Y+P+SP S TSP YSPSSP +SP S YSP+ P
Sbjct: 1656 SSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPS 1715
Query: 374 YSPSSTSQYTPKT 336
YSP+S + YTP T
Sbjct: 1716 YSPTSPN-YTPVT 1727
[153][TOP]
>UniRef100_C5GKA7 DNA-directed RNA polymerase n=2 Tax=Ajellomyces dermatitidis
RepID=C5GKA7_AJEDR
Length = 1746
Score = 104 bits (260), Expect = 4e-21
Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
Frame = -2
Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP
Sbjct: 1619 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1678
Query: 407 PSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
STG Y+P+ PG+SP+S Y+P + + P
Sbjct: 1679 ISTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1721
Score = 91.3 bits (225), Expect = 5e-17
Identities = 49/97 (50%), Positives = 62/97 (63%), Gaps = 23/97 (23%)
Frame = -2
Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSY---------SPSSPTYSP 468
R+SPSS YSPTSP +SP SP+++PTSP+Y SP+SP+YSP
Sbjct: 1578 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPGYQQSPTSPSYSP 1637
Query: 467 SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
+SP S TSP YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1638 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1674
Score = 89.0 bits (219), Expect = 2e-16
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP
Sbjct: 1642 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGISTGRHLSPTSPTSPKYTPTSPG 1701
Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
S TSP+ YSP+SP F SP++ P+ PGYSP+S
Sbjct: 1702 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1736
Score = 87.8 bits (216), Expect = 6e-16
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 36/112 (32%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPD 435
+SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP S TSP
Sbjct: 1635 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGISTGRHLSPTSPTSPK 1694
Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351
Y+P+SP +SP S GYSP+ P ++P+S Q
Sbjct: 1695 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1746
Score = 80.1 bits (196), Expect = 1e-13
Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP+ SPTSP YSP+S YSPTSP S SSP +SP+SP + TSP YSP+
Sbjct: 1564 YSPTSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPT 1622
Query: 422 SP--QFSP-STGYSPSQPGYSPSSTSQYTP 342
SP Q SP S YSP+ PG+SP+S S Y+P
Sbjct: 1623 SPGYQQSPTSPSYSPTSPGFSPTSPS-YSP 1651
Score = 66.6 bits (161), Expect = 1e-09
Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP SP YSPTSP + SPTSP YSPSS YSP+SP S TSP + SSP FSP
Sbjct: 1552 FSPHGARSPGG-GYSPTSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1608
Query: 404 STGYSPSQPGYSPSS 360
S ++P+ P YSP+S
Sbjct: 1609 SPAFAPTSPAYSPTS 1623
Score = 56.6 bits (135), Expect = 1e-06
Identities = 28/51 (54%), Positives = 40/51 (78%), Gaps = 10/51 (19%)
Frame = -2
Query: 581 RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSP 459
+++P+SP +SPTSP +YSPTSP++S PTSP YSP+SPT++P+SP
Sbjct: 1694 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPTSP 1744
[154][TOP]
>UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JXA6_DROGR
Length = 1889
Score = 104 bits (259), Expect = 6e-21
Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSP SPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSAS 1739
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 99.4 bits (246), Expect = 2e-19
Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YSP SPSYSP SPSYSPSSP+YSP+SP S TSP YSP+SP+++ T
Sbjct: 1667 YSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVT 1726
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744
Score = 90.1 bits (222), Expect = 1e-16
Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + TSP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSPRYASATPN 1625
Query: 413 F-SPSTGYSPSQPGYSPSSTSQYTPKTN 333
F + STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNAQSTGYSPSSSGYSPTS-PVYSPTSN 1652
Score = 90.1 bits (222), Expect = 1e-16
Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
PSSPQ SPS TG YSPS YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 89.7 bits (221), Expect = 1e-16
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426
+SP+SP YSP SP+YS T YSPTSP+YSP SP+Y SP SP + SP YSP
Sbjct: 1729 YSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1788
Query: 425 SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1789 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 89.4 bits (220), Expect = 2e-16
Identities = 51/103 (49%), Positives = 61/103 (59%), Gaps = 24/103 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--------------- 447
+SPSSP YSPTSP YSPTSPSYSPTSP Y+ +P+YSP+SP S
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSASPHYSPASPAYSQTG 1753
Query: 446 -----TSPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTP 342
TSP YSP SP + S G Y+P P YSP+S +Y+P
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPAS-PKYSP 1795
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 86.3 bits (212), Expect = 2e-15
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813
Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 82.4 bits (202), Expect = 2e-14
Identities = 51/109 (46%), Positives = 65/109 (59%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPSS YSPTSP YSPTS PS YSP+S +YSP+SP+YSP SP
Sbjct: 1633 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNLYSPGNAYSPSSSNYSPNSPSYSPMSP 1692
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SP S YSP+ P Y+ + T Y+P + + P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPKYT-AVTPSYSPTSPNYSASP 1740
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885
Query: 407 PS 402
S
Sbjct: 1886 ES 1887
Score = 75.9 bits (185), Expect = 2e-12
Identities = 50/112 (44%), Positives = 60/112 (53%), Gaps = 33/112 (29%)
Frame = -2
Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPT-------YSPSSP 459
+SP+SP YSP+SP+YSPTSP Y+ TSP Y+ ++P YSPSS
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSS 1638
Query: 458 YNSGTSPDYSP-----SSPQF--------SPSTGYSPSQPGYSPSSTSQYTP 342
S TSP YSP SSP F SP YSPS YSP+S S Y+P
Sbjct: 1639 GYSPTSPVYSPTSNFQSSPSFAGSGSNLYSPGNAYSPSSSNYSPNSPS-YSP 1689
Score = 65.5 bits (158), Expect = 3e-09
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360
YSP+SP ++ S+ YSPS P YSP+S
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609
[155][TOP]
>UniRef100_C1H3Q4 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1H3Q4_PARBA
Length = 1748
Score = 103 bits (258), Expect = 7e-21
Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
Frame = -2
Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP
Sbjct: 1625 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1684
Query: 407 PSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
STG Y+P+ PG+SP+S Y+P + + P
Sbjct: 1685 GSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1727
Score = 90.5 bits (223), Expect = 8e-17
Identities = 49/97 (50%), Positives = 62/97 (63%), Gaps = 23/97 (23%)
Frame = -2
Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSY---------SPSSPTYSP 468
R+SPSS YSPTSP +SP SP ++PTSP+Y SP+SP+YSP
Sbjct: 1584 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSP 1643
Query: 467 SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
+SP S TSP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1644 TSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1680
Score = 89.0 bits (219), Expect = 2e-16
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP
Sbjct: 1648 FSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPG 1707
Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
S TSP+ YSP+SP F SP++ P+ PGYSP+S
Sbjct: 1708 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1742
Score = 83.2 bits (204), Expect = 1e-14
Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 18/93 (19%)
Frame = -2
Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPT-------------SPSYSPSSPTYSPSSPYNSGT 444
+SPSSP+ SPTSP YSP+S YSPT SP +SP+SP ++P+SP S T
Sbjct: 1570 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPT 1628
Query: 443 SPDY--SPSSPQFSP-STGYSPSQPGYSPSSTS 354
SP Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1629 SPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPS 1661
Score = 75.5 bits (184), Expect = 3e-12
Identities = 45/87 (51%), Positives = 54/87 (62%), Gaps = 28/87 (32%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPS------------------YSPTSPSYSPSSP-TYSPSSP 459
FSP+SP +SPTSPSYSPTSP+ Y+PTSP +SP+SP TYSP+SP
Sbjct: 1662 FSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSP 1721
Query: 458 YNSG--------TSPDYSPSSPQFSPS 402
SG TSP YSP+SP FSP+
Sbjct: 1722 NFSGSPTSPGGPTSPGYSPTSPTFSPT 1748
Score = 63.9 bits (154), Expect = 9e-09
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
FSP SP YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP+
Sbjct: 1558 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1614
Query: 401 TG-YSPSQPGYSPSS 360
+ ++P+ P YSP+S
Sbjct: 1615 SPVFAPTSPAYSPTS 1629
[156][TOP]
>UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0A92
Length = 1714
Score = 103 bits (257), Expect = 1e-20
Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GTSPDYSPS 423
+ P SP Y+P SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+
Sbjct: 1577 YEPRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPT 1636
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP +SP S YSP+ P YSP+S + YTP
Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPTSPN-YTP 1663
Score = 101 bits (252), Expect = 4e-20
Identities = 54/99 (54%), Positives = 66/99 (66%), Gaps = 20/99 (20%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-------------------- 459
+SP+SP PTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1620 YSPTSPSGPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPPHQLVPTSPYTPHISV 1679
Query: 458 YNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
Y+ TSP YSP+SP+ S YSP+ PGYSP+S + Y+P
Sbjct: 1680 YSPPTSPTYSPTSPKGST---YSPTSPGYSPTSPT-YSP 1714
Score = 100 bits (249), Expect = 8e-20
Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 13/92 (14%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSS 420
+SP+SP YSPTSPSYSPTSPSYSPTSPS YSP+SP+YSP+SP S TSP YSP+S
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1658
Query: 419 PQFS------PSTGYSPSQPGYSPSSTSQYTP 342
P ++ P++ Y+P YSP ++ Y+P
Sbjct: 1659 PNYTPPHQLVPTSPYTPHISVYSPPTSPTYSP 1690
Score = 94.4 bits (233), Expect = 6e-18
Identities = 51/97 (52%), Positives = 62/97 (63%), Gaps = 20/97 (20%)
Frame = -2
Query: 572 PSSPYSPT-----SPSYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 453
P+SPY P+ SP+YSPTSP+ YSPTSPSYSP+SP+YSP+SP
Sbjct: 1554 PASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPSY 1613
Query: 452 SGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP S YSP+ P YSP+S S Y+P
Sbjct: 1614 SPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPS-YSP 1649
Score = 61.2 bits (147), Expect = 6e-08
Identities = 42/87 (48%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Frame = -2
Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417
FSPS S S SP YSP ++SPT S P SP P+SPY SP+YSP+SP
Sbjct: 1523 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPASPYIPSPGGAMSPNYSPTSP 1575
Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342
+ P + GY+P PGYSP+S S Y+P
Sbjct: 1576 AYEPRSPGGYTPQSPGYSPTSPS-YSP 1601
[157][TOP]
>UniRef100_O77165 DNA-directed RNA polymerase (Fragment) n=1 Tax=Breviata anathema
RepID=O77165_9EUKA
Length = 1690
Score = 103 bits (257), Expect = 1e-20
Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 1506 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1565
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1566 SPAYSPASPAYSPASPA-YSP 1585
Score = 103 bits (257), Expect = 1e-20
Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 1527 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1586
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1587 SPAYSPASPAYSPASPA-YSP 1606
Score = 103 bits (257), Expect = 1e-20
Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 1548 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1607
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1608 SPAYSPASPAYSPASPA-YSP 1627
Score = 103 bits (257), Expect = 1e-20
Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 1569 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1628
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1629 SPAYSPASPAYSPASPA-YSP 1648
Score = 102 bits (253), Expect = 3e-20
Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 1590 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1649
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S Y P+ P YSP+S + Y+P
Sbjct: 1650 SPAYGPASPAYSPASPA-YSP 1669
Score = 102 bits (253), Expect = 3e-20
Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP + P
Sbjct: 1597 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPA 1656
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1657 SPAYSPASPAYSPASPA-YSP 1676
Score = 101 bits (251), Expect = 5e-20
Identities = 49/81 (60%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP S SP Y P+SP +SP
Sbjct: 1604 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPA 1663
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y P
Sbjct: 1664 SPAYSPASPAYSPASPA-YDP 1683
Score = 97.8 bits (242), Expect = 5e-19
Identities = 45/74 (60%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP SP YSP+SP +SP
Sbjct: 1611 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPA 1670
Query: 404 STGYSPSQPGYSPS 363
S YSP+ P Y P+
Sbjct: 1671 SPAYSPASPAYDPA 1684
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Frame = -2
Query: 563 PYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSP 387
P SP + YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP
Sbjct: 1498 PGSPAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSP 1557
Query: 386 SQPGYSPSSTSQYTP 342
+ P YSP+S + Y+P
Sbjct: 1558 ASPAYSPASPA-YSP 1571
Score = 85.9 bits (211), Expect = 2e-15
Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSP SP+YSP SP+YSP SP+Y P+SP YSP+SP S SP YSP+SP + P+
Sbjct: 1625 YSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPA 1684
Query: 401 TGY 393
Y
Sbjct: 1685 EPY 1687
Score = 80.5 bits (197), Expect = 9e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Frame = -2
Query: 572 PSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
PSSP Y P S P + YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 1486 PSSPGPFGYIPVPGS--PAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSP 1543
Query: 404 -STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P YSP+S + Y+P
Sbjct: 1544 ASPAYSPASPAYSPASPA-YSP 1564
Score = 66.2 bits (160), Expect = 2e-09
Identities = 27/43 (62%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN 453
+SP+SP Y P SP+YSP SP+YSP SP+YSP+SP Y P+ PY+
Sbjct: 1646 YSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPAEPYD 1688
[158][TOP]
>UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L732_DROMO
Length = 1889
Score = 103 bits (257), Expect = 1e-20
Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSP SPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1680 YSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 102 bits (253), Expect = 3e-20
Identities = 49/80 (61%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YSP SPSYSP SPSYSPSSP+YSP+SP S TSP YSP+SP ++P T
Sbjct: 1667 YSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744
Score = 93.2 bits (230), Expect = 1e-17
Identities = 50/88 (56%), Positives = 64/88 (72%), Gaps = 7/88 (7%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + TSP Y+ ++P
Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASTSPRYASTTPN 1625
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTSN 1652
Score = 90.1 bits (222), Expect = 1e-16
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
+SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S
Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767
Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 90.1 bits (222), Expect = 1e-16
Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342
PSSPQ SPS TG YSPS YSP+S + YTP
Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 86.7 bits (213), Expect = 1e-15
Identities = 54/102 (52%), Positives = 61/102 (59%), Gaps = 21/102 (20%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPT-----SPS--------------YSPSSPTYSPSSP 459
F+P S YSP+S YSPTSP YSPT SPS YSPSS YSP+SP
Sbjct: 1626 FNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSP 1685
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
S SP YSPSSP +SP S YSP+ P YSP+S + YTP T
Sbjct: 1686 SYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726
Score = 86.3 bits (212), Expect = 2e-15
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813
Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 85.5 bits (210), Expect = 3e-15
Identities = 52/109 (47%), Positives = 65/109 (59%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459
+SPSS YSPTSP YSPTS PS YSP+S +YSP+SP+YSP SP
Sbjct: 1633 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPMSP 1692
Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1740
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885
Query: 407 PS 402
S
Sbjct: 1886 ES 1887
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 13/92 (14%)
Frame = -2
Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438
+SP+SP YSP+SP+YSPTSP Y+ TSP Y+ ++P ++P S S +S
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASTSPRYASTTPNFNPQSTGYSPSSS 1638
Query: 437 DYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
YSP+SP +SP++ + S P ++ S ++ Y+P
Sbjct: 1639 GYSPTSPVYSPTSNFQ-SSPSFAGSGSNMYSP 1669
Score = 67.4 bits (163), Expect = 8e-10
Identities = 41/92 (44%), Positives = 52/92 (56%), Gaps = 19/92 (20%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSPS S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 1518 FSPSGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360
YSP+SP ++ S+ YSPS P YSP+S
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609
[159][TOP]
>UniRef100_C6F1F2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F2_9APIC
Length = 232
Score = 103 bits (256), Expect = 1e-20
Identities = 51/83 (61%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+S +SP YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP S TSP YSP+SP++SP
Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 115
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S YSP+ P YSP+S P +
Sbjct: 116 SPKYSPTSPQYSPTSPVPNNPSS 138
Score = 102 bits (254), Expect = 2e-20
Identities = 49/75 (65%), Positives = 59/75 (78%), Gaps = 3/75 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP Y PTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 69 KYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSP 128
Query: 404 STGY--SPSQPGYSP 366
++ +PS P YSP
Sbjct: 129 TSPVPNNPSSPHYSP 143
Score = 100 bits (248), Expect = 1e-19
Identities = 50/77 (64%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S QY+P
Sbjct: 113 SPTSPKYSPTS-PQYSP 128
Score = 90.5 bits (223), Expect = 8e-17
Identities = 49/94 (52%), Positives = 61/94 (64%), Gaps = 15/94 (15%)
Frame = -2
Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
+SP+SP +S SP YS TSP YSPTSP YSP+SP Y P+SP S TS
Sbjct: 29 YSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTS 88
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 89 PKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 121
Score = 81.6 bits (200), Expect = 4e-14
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP P++P +SP YSP +SP+
Sbjct: 97 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPV--PNNP----SSPHYSPYAIASPK 150
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
FSP S YS S P Y S ++
Sbjct: 151 FSPTSPAYSISSPVYDQSGNAR 172
Score = 60.1 bits (144), Expect = 1e-07
Identities = 43/114 (37%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSP------------------SYSPSSPTYSPSSP 459
++SP+SP YSPTSP YSPTSP YSPTSP +SP+SP YS SSP
Sbjct: 104 KYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSP 163
Query: 458 YNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTPKTNDN-----KDDP 315
+ + S SP+ SP Q S ++P N DDP
Sbjct: 164 VYDQSGNARNKSQHPLSPAYILQSPVQVKQHIQDVSVFSPIQQANAEGAQNDDP 217
[160][TOP]
>UniRef100_Q1E2G9 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1E2G9_COCIM
Length = 1750
Score = 102 bits (255), Expect = 2e-20
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 17/105 (16%)
Frame = -2
Query: 578 FSPSSP-----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
+SP+SP SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP
Sbjct: 1621 YSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPA 1680
Query: 413 FSPSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
+TG Y+P+ PG+SP+S Y+P + + P
Sbjct: 1681 LGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFAGSP 1725
Score = 95.5 bits (236), Expect = 3e-18
Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
R+ S +SP SP+++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP
Sbjct: 1600 RYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1659
Query: 413 FSP-STGYSPSQPGYSPSS 360
FSP S +SP+ P YSP+S
Sbjct: 1660 FSPASPAFSPTSPSYSPTS 1678
Score = 89.0 bits (219), Expect = 2e-16
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP
Sbjct: 1646 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPG 1705
Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
S TSP+ YSP+SP F SP++ P+ PGYSP+S
Sbjct: 1706 WSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTS 1740
Score = 88.2 bits (217), Expect = 4e-16
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 36/112 (32%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435
+SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP G TSP
Sbjct: 1639 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPK 1698
Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351
Y+P+SP +SP S GYSP+ P ++P+S Q
Sbjct: 1699 YTPTSPGWSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1750
Score = 72.8 bits (177), Expect = 2e-11
Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 7/86 (8%)
Frame = -2
Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+SP+SP+ SPTSP YSP+S YSPTSP S +SP Y TSP +SP+SP F+P
Sbjct: 1566 YSPTSPFNTSPTSPGYSPSS-GYSPTSPGMSITSPRYM--------TSPGFSPASPTFAP 1616
Query: 404 -STGYSPSQPGY----SPSSTSQYTP 342
S YSP+ PGY SP+S S Y+P
Sbjct: 1617 TSPAYSPTSPGYGQAQSPTSPS-YSP 1641
Score = 67.0 bits (162), Expect = 1e-09
Identities = 43/75 (57%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP+ SP YSPTSP + SPTSP YSPSS YSP+SP S TSP Y +SP FSP
Sbjct: 1555 FSPAGARSPGG--YSPTSPFNTSPTSPGYSPSSG-YSPTSPGMSITSPRYM-TSPGFSPA 1610
Query: 404 STGYSPSQPGYSPSS 360
S ++P+ P YSP+S
Sbjct: 1611 SPTFAPTSPAYSPTS 1625
Score = 53.9 bits (128), Expect = 9e-06
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTS--------PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
P S +SP + S T P + SP+ + S YSP+SP+N+ SP+SP
Sbjct: 1526 PDSQFSPIGQTGSETPAGFTEYQPPGFGGFSPAGARSPGGYSPTSPFNT------SPTSP 1579
Query: 416 QFSPSTGYSPSQPGYSPSSTSQYT 345
+SPS+GYSP+ PG S +S T
Sbjct: 1580 GYSPSSGYSPTSPGMSITSPRYMT 1603
[161][TOP]
>UniRef100_C5PAJ4 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta
SOWgp RepID=C5PAJ4_COCP7
Length = 1746
Score = 102 bits (255), Expect = 2e-20
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 17/105 (16%)
Frame = -2
Query: 578 FSPSSP-----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
+SP+SP SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP
Sbjct: 1621 YSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPA 1680
Query: 413 FSPSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
+TG Y+P+ PG+SP+S Y+P + + P
Sbjct: 1681 LGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFAGSP 1725
Score = 95.5 bits (236), Expect = 3e-18
Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
R+ S +SP SP+++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP
Sbjct: 1600 RYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1659
Query: 413 FSP-STGYSPSQPGYSPSS 360
FSP S +SP+ P YSP+S
Sbjct: 1660 FSPASPAFSPTSPSYSPTS 1678
Score = 89.0 bits (219), Expect = 2e-16
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456
FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP
Sbjct: 1646 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPG 1705
Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360
S TSP+ YSP+SP F SP++ P+ PGYSP+S
Sbjct: 1706 WSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTS 1740
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 36/108 (33%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435
+SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP G TSP
Sbjct: 1639 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPK 1698
Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPS 363
Y+P+SP +SP S GYSP+ P ++P+
Sbjct: 1699 YTPTSPGWSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTSPTFNPT 1746
Score = 72.8 bits (177), Expect = 2e-11
Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 7/86 (8%)
Frame = -2
Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+SP+SP+ SPTSP YSP+S YSPTSP S +SP Y TSP +SP+SP F+P
Sbjct: 1566 YSPTSPFNTSPTSPGYSPSS-GYSPTSPGMSITSPRYM--------TSPGFSPASPTFAP 1616
Query: 404 -STGYSPSQPGY----SPSSTSQYTP 342
S YSP+ PGY SP+S S Y+P
Sbjct: 1617 TSPAYSPTSPGYGQAQSPTSPS-YSP 1641
Score = 67.0 bits (162), Expect = 1e-09
Identities = 43/75 (57%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP+ SP YSPTSP + SPTSP YSPSS YSP+SP S TSP Y +SP FSP
Sbjct: 1555 FSPAGARSPGG--YSPTSPFNTSPTSPGYSPSSG-YSPTSPGMSITSPRYM-TSPGFSPA 1610
Query: 404 STGYSPSQPGYSPSS 360
S ++P+ P YSP+S
Sbjct: 1611 SPTFAPTSPAYSPTS 1625
Score = 53.9 bits (128), Expect = 9e-06
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTS--------PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
P S +SP + S T P + SP+ + S YSP+SP+N+ SP+SP
Sbjct: 1526 PDSQFSPIGQTGSETPAGFTEYQPPGFGGFSPAGARSPGGYSPTSPFNT------SPTSP 1579
Query: 416 QFSPSTGYSPSQPGYSPSSTSQYT 345
+SPS+GYSP+ PG S +S T
Sbjct: 1580 GYSPSSGYSPTSPGMSITSPRYMT 1603
[162][TOP]
>UniRef100_C6F1F3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F3_9APIC
Length = 225
Score = 102 bits (254), Expect = 2e-20
Identities = 49/75 (65%), Positives = 59/75 (78%), Gaps = 3/75 (4%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP Y PTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP
Sbjct: 62 KYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSP 121
Query: 404 STGY--SPSQPGYSP 366
++ +PS P YSP
Sbjct: 122 TSPVPNNPSSPHYSP 136
Score = 98.6 bits (244), Expect = 3e-19
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+S +SP YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP S TSP YSP+SP++SP
Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 115
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P + S+ Y+P
Sbjct: 116 SPQYSPTSPVPNNPSSPHYSP 136
Score = 98.2 bits (243), Expect = 4e-19
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112
Query: 392 SPSQPGYSPSSTSQYTPKT 336
SP+ P YSP+S P +
Sbjct: 113 SPTSPQYSPTSPVPNNPSS 131
Score = 92.0 bits (227), Expect = 3e-17
Identities = 50/94 (53%), Positives = 61/94 (64%), Gaps = 15/94 (15%)
Frame = -2
Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
+SP+SP +S SP YS TSP YSPTSP YSP+SP Y P+SP S TS
Sbjct: 29 YSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTS 88
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SP++SP S YSP+ P YSP+S QY+P
Sbjct: 89 PKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSP 121
Score = 81.6 bits (200), Expect = 4e-14
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP P++P +SP YSP +SP+
Sbjct: 90 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPV--PNNP----SSPHYSPYAIASPK 143
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
FSP S YS S P Y S ++
Sbjct: 144 FSPTSPAYSISSPVYDQSGNAR 165
Score = 60.1 bits (144), Expect = 1e-07
Identities = 43/114 (37%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSP------------------SYSPSSPTYSPSSP 459
++SP+SP YSPTSP YSPTSP YSPTSP +SP+SP YS SSP
Sbjct: 97 KYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSP 156
Query: 458 YNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTPKTNDN-----KDDP 315
+ + S SP+ SP Q S ++P N DDP
Sbjct: 157 VYDQSGNARNKSQHPLSPAYILQSPVQVKQHIQDVSVFSPIQQANAEGAQNDDP 210
[163][TOP]
>UniRef100_C6F1F0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F0_PLAVI
Length = 218
Score = 101 bits (252), Expect = 4e-20
Identities = 50/74 (67%), Positives = 58/74 (78%), Gaps = 3/74 (4%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SPS
Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 115
Query: 401 TGY--SPSQPGYSP 366
+ +PS P YSP
Sbjct: 116 SPVPNNPSSPHYSP 129
Score = 97.1 bits (240), Expect = 9e-19
Identities = 48/77 (62%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 112
Query: 392 SPSQPGYSPSSTSQYTP 342
SPS P + S+ Y+P
Sbjct: 113 SPSSPVPNNPSSPHYSP 129
Score = 93.6 bits (231), Expect = 1e-17
Identities = 50/96 (52%), Positives = 60/96 (62%), Gaps = 15/96 (15%)
Frame = -2
Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
+SP+SP +S SP YS TSP YSPTSP YSP+SP YSP+SP S TS
Sbjct: 29 YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 88
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
P YSP+SP++SP S YSP+ P YSPSS P +
Sbjct: 89 PKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 124
Score = 82.8 bits (203), Expect = 2e-14
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP P++P +SP YSP +SP+
Sbjct: 83 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 136
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
FSP S YS S P Y S ++
Sbjct: 137 FSPTSPAYSISSPVYDQSGNAR 158
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/99 (47%), Positives = 58/99 (58%), Gaps = 21/99 (21%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 450
SS + T YSPTSP+ YS TSP YSP+SP YSP+SP S
Sbjct: 19 SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYS 78
Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
TSP YSP+SP++SP S YSP+ P YSP+S QY+P +
Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSPSS 116
[164][TOP]
>UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q7SDN0_NEUCR
Length = 1752
Score = 101 bits (252), Expect = 4e-20
Identities = 56/97 (57%), Positives = 70/97 (72%), Gaps = 7/97 (7%)
Frame = -2
Query: 581 RFSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-YSPSSPQ 414
R+SP+SP +SPTSPSYSPTSPSYSP SP++ +SP+YSP+SP S TSPD YSP+SP
Sbjct: 1653 RYSPTSPAQQFSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPTWSPTSPDAYSPTSPS 1712
Query: 413 F--SPSTGYSPSQP-GYSPSSTSQYTPKTNDNKDDPG 312
F SP SP+ P GYSP+S QY+P+T + G
Sbjct: 1713 FQRSPGQQLSPTSPTGYSPTS-PQYSPRTPGRNNSGG 1748
Score = 95.9 bits (237), Expect = 2e-18
Identities = 55/115 (47%), Positives = 69/115 (60%), Gaps = 23/115 (20%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSY----------SPTSPSYSPTSPSYSPSSPT---YSPSSPYN--SG 447
RF+ S +SP+SPS+ SPTSPSYSPTSPSYSP+SP YSP+SP S
Sbjct: 1606 RFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSP 1665
Query: 446 TSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
TSP YSP+SP +SP S YSP+ P +SP+S Y+P + + PG Q
Sbjct: 1666 TSPSYSPTSPSYSPASPAFQATSPSYSPASPTWSPTSPDAYSPTSPSFQRSPGQQ 1720
Score = 75.5 bits (184), Expect = 3e-12
Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 17/96 (17%)
Frame = -2
Query: 578 FSPSSP---YSPTSPSYSP-----TSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDY 432
+SPSSP YSP+SP +SP +SP+SPS+SP+SP SP+SP S TSP Y
Sbjct: 1585 YSPSSPAAGYSPSSPLLDSAGRFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSY 1644
Query: 431 SPSSP------QFSPSTGYSPSQPGYSPSSTSQYTP 342
SP+SP SP+ +SP+ P YSP+S S Y+P
Sbjct: 1645 SPASPAAARYSPTSPAQQFSPTSPSYSPTSPS-YSP 1679
Score = 63.9 bits (154), Expect = 9e-09
Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 16/101 (15%)
Frame = -2
Query: 569 SSPYSPTSP-SYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-- 405
+SP++PTSP SY YSP+SP+ YSPSSP + + S SP +SPSSP FSP
Sbjct: 1571 TSPFTPTSPFSYG----GYSPSSPAAGYSPSSPLLDSAGRFAS--SPQFSPSSPSFSPTS 1624
Query: 404 ---------STGYSPSQPGYSPSS--TSQYTPKTNDNKDDP 315
S YSP+ P YSP+S ++Y+P + + P
Sbjct: 1625 PMLRPGSPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSP 1665
[165][TOP]
>UniRef100_C4JY44 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JY44_UNCRE
Length = 1747
Score = 101 bits (252), Expect = 4e-20
Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 17/105 (16%)
Frame = -2
Query: 578 FSPSSP-----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
+SP+SP SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP
Sbjct: 1573 YSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPA 1632
Query: 413 FSPSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
TG Y+P+ PG+SP+S Y+P + + P
Sbjct: 1633 LGGVTGRHLSPTSPTSPKYTPTSPGWSPTSPDAYSPTSPNFAGSP 1677
Score = 97.8 bits (242), Expect = 5e-19
Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
RF S +SP SPS++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP
Sbjct: 1552 RFMTSPGFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1611
Query: 413 FSP-STGYSPSQPGYSPSS 360
FSP S +SP+ P YSP+S
Sbjct: 1612 FSPASPAFSPTSPSYSPTS 1630
Score = 89.0 bits (219), Expect = 2e-16
Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 30/109 (27%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435
+SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP G TSP
Sbjct: 1591 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGVTGRHLSPTSPTSPK 1650
Query: 434 YSPSSPQFSPST--GYSPSQ----------------PGYSPSSTSQYTP 342
Y+P+SP +SP++ YSP+ PGYSP+S + Y P
Sbjct: 1651 YTPTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLLPPGYSPTSPT-YNP 1698
Score = 70.1 bits (170), Expect = 1e-10
Identities = 47/104 (45%), Positives = 57/104 (54%), Gaps = 25/104 (24%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPS-------------------SPTYSPSSP 459
FSP+ SP YSPTSP + SPTSP YSPS SP +SP+SP
Sbjct: 1506 FSPAGARSPGG-GYSPTSPFNTSPTSPGYSPSSGYSPTSPGMGITSPRFMTSPGFSPASP 1564
Query: 458 YNSGTSPDYSPSSP-----QFSPSTGYSPSQPGYSPSSTSQYTP 342
+ TSP YSP+SP Q S YSP+ PG+SP+S S Y+P
Sbjct: 1565 SFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPS-YSP 1607
Score = 68.6 bits (166), Expect = 3e-10
Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 3/58 (5%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSPS 402
SP SPTSP Y+PTSP +SPTSP +YSP+SP + SP+SP S P YSP+SP ++P+
Sbjct: 1642 SPTSPTSPKYTPTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLLPPGYSPTSPTYNPN 1699
[166][TOP]
>UniRef100_C5FCL2 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FCL2_NANOT
Length = 1748
Score = 100 bits (250), Expect = 6e-20
Identities = 53/104 (50%), Positives = 68/104 (65%), Gaps = 16/104 (15%)
Frame = -2
Query: 578 FSPSSP-----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP- 417
+SP+SP SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP
Sbjct: 1620 YSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSPTSPA 1679
Query: 416 ------QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP S Y+P+ PG+SP+S Y+P + + P
Sbjct: 1680 LGGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFSGSP 1723
Score = 96.7 bits (239), Expect = 1e-18
Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 5/79 (6%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
RF S +SP SPS++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP
Sbjct: 1599 RFISSPAFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1658
Query: 413 FSP-STGYSPSQPGYSPSS 360
FSP S +SP+ P YSP+S
Sbjct: 1659 FSPASPVFSPTSPSYSPTS 1677
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 14/90 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSP-YNSGTSPD 435
FSP+SP +SPTSPSYSPTSP+ SPTSP Y+P+SP +SP+SP S TSP+
Sbjct: 1659 FSPASPVFSPTSPSYSPTSPALGGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPN 1718
Query: 434 Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQ 351
+ SP+SP S GYSP+ P ++P+S Q
Sbjct: 1719 FSGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1748
Score = 71.6 bits (174), Expect = 4e-11
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Frame = -2
Query: 575 SPSSPYSPTSP-SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
SP YSP+SP + SPTSP+YSP+S YSP+SP S +SP +SP +SP+SP F+P S
Sbjct: 1560 SPGGGYSPSSPFNTSPTSPAYSPSS-GYSPTSPGMSITSP-RFISSPAFSPASPSFAPTS 1617
Query: 401 TGYSPSQPGY----SPSSTSQYTP 342
YSP+ PGY SP+S S Y+P
Sbjct: 1618 PAYSPTSPGYGQAQSPTSPS-YSP 1640
Score = 68.9 bits (167), Expect = 3e-10
Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
FSP P SP YSP+SP + SPTSP+YSPSS YSP+SP S TSP + SSP FSP
Sbjct: 1553 FSPHEPRSPGG-GYSPSSPFNTSPTSPAYSPSSG-YSPTSPGMSITSPRFI-SSPAFSPA 1609
Query: 404 STGYSPSQPGYSPSS 360
S ++P+ P YSP+S
Sbjct: 1610 SPSFAPTSPAYSPTS 1624
Score = 55.5 bits (132), Expect = 3e-06
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTS--------PSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPS 423
P S +SP + S + PSY SP + P SP YSPSSP+N+ SP+
Sbjct: 1524 PDSQFSPVRQAGSENAVGFADYQPPSYGGFSP-HEPRSPGGGYSPSSPFNT------SPT 1576
Query: 422 SPQFSPSTGYSPSQPGYSPSS 360
SP +SPS+GYSP+ PG S +S
Sbjct: 1577 SPAYSPSSGYSPTSPGMSITS 1597
[167][TOP]
>UniRef100_Q54LJ4 Type A von Willebrand factor domain-containing protein n=1
Tax=Dictyostelium discoideum RepID=Q54LJ4_DICDI
Length = 2563
Score = 100 bits (249), Expect = 8e-20
Identities = 48/73 (65%), Positives = 53/73 (72%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
F S PYSPTSP Y PTSPSYSPTSPSYSP+SP+YSP+SP S TSP YS S S S
Sbjct: 1840 FQASQPYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQ 1899
Query: 398 GYSPSQPGYSPSS 360
YSP P Y+P+S
Sbjct: 1900 SYSPVSPSYTPTS 1912
Score = 97.8 bits (242), Expect = 5e-19
Identities = 52/103 (50%), Positives = 66/103 (64%), Gaps = 15/103 (14%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GTSPDYSPSS 420
+SP+SP Y PTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TS YSP S
Sbjct: 1846 YSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVS 1905
Query: 419 PQFSPST--------GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
P ++P++ YSP P Y+P+ S+ T+ + P
Sbjct: 1906 PSYTPTSLLYAPTIPSYSPVSPSYAPTKPSKLPVLTSYSPSSP 1948
Score = 89.4 bits (220), Expect = 2e-16
Identities = 45/77 (58%), Positives = 53/77 (68%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
P S + S YSPTSP Y PTSPSYSP+SP+YSP+SP S TSP YSP+SP +S S Y
Sbjct: 1835 PPSLFFQASQPYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLY 1894
Query: 392 SPSQPGYSPSSTSQYTP 342
+ + YSP S S YTP
Sbjct: 1895 ASTSQSYSPVSPS-YTP 1910
Score = 82.4 bits (202), Expect = 2e-14
Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 15/91 (16%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYS-------------PTSPSYSPSSPTYSPSSPYNSGTS 441
+SP+SP YSPTSPSYSPTSPSYS P SPSY+P+S Y+P+ P S S
Sbjct: 1867 YSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTSLLYAPTIPSYSPVS 1926
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 351
P Y+P+ P P T YSPS P +S S +
Sbjct: 1927 PSYAPTKPSKLPVLTSYSPSSPSFSKSKAKE 1957
Score = 74.7 bits (182), Expect = 5e-12
Identities = 42/89 (47%), Positives = 50/89 (56%), Gaps = 12/89 (13%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
S S YSP SPSY+PTS Y+PT PSYSP SP+Y+P+ P YSPSSP FS S
Sbjct: 1896 STSQSYSPVSPSYTPTSLLYAPTIPSYSPVSPSYAPTKPSKLPVLTSYSPSSPSFSKSKA 1955
Query: 395 YS---------PSQP---GYSPSSTSQYT 345
PS+P GYS ST ++
Sbjct: 1956 KEESTLSEINLPSKPMVAGYSRMSTVSFS 1984
[168][TOP]
>UniRef100_O77375 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O77375_PLAF7
Length = 2457
Score = 100 bits (249), Expect = 8e-20
Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP
Sbjct: 2294 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 2353
Query: 404 ST--GYSPSQPGYSPSS 360
++ + + P YSP S
Sbjct: 2354 TSPVAQNIASPNYSPYS 2370
Score = 99.8 bits (247), Expect = 1e-19
Identities = 48/71 (67%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 2285 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2344
Query: 392 SPSQPGYSPSS 360
SP+ P YSP+S
Sbjct: 2345 SPTSPKYSPTS 2355
Score = 99.4 bits (246), Expect = 2e-19
Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP
Sbjct: 2288 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2347
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S YSP+ P ++ Y+P
Sbjct: 2348 SPKYSPTSPVAQNIASPNYSP 2368
Score = 94.4 bits (233), Expect = 6e-18
Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 2278 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2337
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S +Y+P
Sbjct: 2338 SPTSPKYSPTS-PKYSP 2353
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S TSP
Sbjct: 2322 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 2381
Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330
YS SSP + S + P P Y S Q D
Sbjct: 2382 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 2420
Score = 78.2 bits (191), Expect = 4e-13
Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 12/91 (13%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDY 432
+SPS YSPTSP+Y+ + YSPTSP Y+ SP YS +SP S TSP Y
Sbjct: 2245 YSPS--YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKY 2302
Query: 431 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 2303 SPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2332
[169][TOP]
>UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4MAN9_DROVI
Length = 1889
Score = 100 bits (249), Expect = 8e-20
Identities = 49/97 (50%), Positives = 66/97 (68%), Gaps = 7/97 (7%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+S +SP YSP SPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S
Sbjct: 1680 YSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309
YSP+ P YS + ++ Y+P + PG+
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776
Score = 100 bits (248), Expect = 1e-19
Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP + YSP+S +YS SPSYSP SPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T
Sbjct: 1667 YSPGNAYSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726
Query: 398 -GYSPSQPGYSPSSTSQYTP 342
YSP+ P YS S Y+P
Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744
Score = 90.9 bits (224), Expect = 7e-17
Identities = 50/100 (50%), Positives = 62/100 (62%), Gaps = 22/100 (22%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438
SP SP Y+P SP YSPTSP YSPTSP YSPSSP +SPS+ Y+ S TSP
Sbjct: 1773 SPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342
YSP+SP ++P+ YSP+ P YSP++ S Y+P
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 90.1 bits (222), Expect = 1e-16
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462
+SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S
Sbjct: 1708 YSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767
Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342
P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P
Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPS--NQYSP 1815
Score = 87.0 bits (214), Expect = 9e-16
Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402
SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+
Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867
Query: 401 TGYSPSQPGYSPSS 360
+ YSP+ P YSPSS
Sbjct: 1868 SHYSPTSPAYSPSS 1881
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/88 (54%), Positives = 62/88 (70%), Gaps = 7/88 (7%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + TS Y+ ++P
Sbjct: 1566 SPHFSTSPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSLRYASATPN 1625
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333
F+P STGYSPS GYSP+S Y+P +N
Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTSN 1652
Score = 86.3 bits (212), Expect = 2e-15
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+
Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSN-QY 1813
Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342
SP S YSP+ YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/85 (55%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQ 414
SPS SP SP Y+P SP YSPTSP YSP+SP YSPSSP + S T YS +SP+
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1826
Query: 413 FSPSTG-YSPSQPGYSPSSTSQYTP 342
+SP+ YSPS YSP+S + YTP
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPT-YTP 1850
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = -2
Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408
R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F
Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885
Query: 407 PS 402
S
Sbjct: 1886 ES 1887
Score = 73.6 bits (179), Expect = 1e-11
Identities = 56/148 (37%), Positives = 65/148 (43%), Gaps = 67/148 (45%)
Frame = -2
Query: 578 FSPSSP-------------YSPTSPSYSPTSP---------------------------- 522
+SP+SP YSP+SP+YSPTSP
Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSLRYASATPNFNPQSTGYSPSSS 1638
Query: 521 SYSPTSPSYSP-----SSPT--------------YSPSSPYNSGTSPDYSPSSPQFSPST 399
YSPTSP YSP SSP+ YSPSS S SP YSP SP +SPS+
Sbjct: 1639 GYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSSNSPSYSPMSPSYSPSS 1698
Query: 398 -GYSPSQPGYSPSSTS------QYTPKT 336
YSP+ P YSP+S S YTP T
Sbjct: 1699 PSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726
Score = 64.3 bits (155), Expect = 7e-09
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSPS S +P PS+SP+ SPS+SP P SPSSP + SP + SP
Sbjct: 1518 FSPSGHVSGMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPHFSTSPSVSP 1577
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360
YSP+SP ++ S+ YSPS P YSP+S
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609
[170][TOP]
>UniRef100_C8VQG7 DNA-directed RNA polymerase (EC 2.7.7.6)
[Source:UniProtKB/TrEMBL;Acc:Q873Q6] n=2 Tax=Emericella
nidulans RepID=C8VQG7_EMENI
Length = 1745
Score = 100 bits (248), Expect = 1e-19
Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 21/109 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSY---SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
F+P+SP YSPTSP+Y SPTSPSYSPTSP +SP+SP YSP+SP S TSP +SP+SP +
Sbjct: 1612 FAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSY 1671
Query: 410 SP-----------------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP S Y+P+ PG+SP+S Y+P + + P
Sbjct: 1672 SPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1720
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 4/78 (5%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
RF S +SP SPS++PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP F
Sbjct: 1598 RFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSF 1657
Query: 410 SP-STGYSPSQPGYSPSS 360
SP S +SP+ P YSP+S
Sbjct: 1658 SPTSPAFSPTSPSYSPTS 1675
Score = 91.7 bits (226), Expect = 4e-17
Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 34/110 (30%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG---------TSPDYS 429
+SP+SP +SPTSP+YSPTSPS+SPTSP++SP+SP+YSP+SP G TSP Y+
Sbjct: 1636 YSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYT 1695
Query: 428 PSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351
P+SP +SP S GYSP+ P +SP+S Q
Sbjct: 1696 PTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPTSPRQ 1745
Score = 90.1 bits (222), Expect = 1e-16
Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 17/96 (17%)
Frame = -2
Query: 578 FSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSG 447
+SP+S YSPTSP +SP SPS++PTSP+YSP+SP Y SP+SP S
Sbjct: 1579 YSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSP 1638
Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
TSP +SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 1639 TSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPS-YSP 1673
Score = 68.9 bits (167), Expect = 3e-10
Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Frame = -2
Query: 578 FSPSSPYS--PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+SPSSP+S PTSP YSPTS SYSPTSP +SP + TSP +SP+SP F+P
Sbjct: 1564 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFM--------TSPGFSPASPSFAP 1614
Query: 404 -STGYSPSQPG---YSPSSTSQYTP 342
S YSP+ P SP+S S Y+P
Sbjct: 1615 TSPAYSPTSPAYGQASPTSPS-YSP 1638
[171][TOP]
>UniRef100_B6QAY2 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QAY2_PENMQ
Length = 1744
Score = 100 bits (248), Expect = 1e-19
Identities = 55/112 (49%), Positives = 65/112 (58%), Gaps = 24/112 (21%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
FSP SP YSPTSPS+ TSPSYSPTSP +SPSSP YSPSSP S SP +SPS
Sbjct: 1607 FSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSPASPAFSPS 1666
Query: 422 SPQFSP----------------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP +SP S YSP+ PG+SP+S Y+P + + P
Sbjct: 1667 SPTYSPTSPAIGGRQFSPSSPSSPKYSPASPGWSPTSPEIYSPTSPNIHGSP 1718
Score = 94.7 bits (234), Expect = 5e-18
Identities = 48/88 (54%), Positives = 66/88 (75%), Gaps = 6/88 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
RF +SP +SP SP+++ TSP+YSPTSPS+ +SP+YSP+SP S +SP+YSPSSP FSP
Sbjct: 1599 RFMSTSPGFSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSP 1658
Query: 404 -STGYSPSQPGYSPSSTS----QYTPKT 336
S +SPS P YSP+S + Q++P +
Sbjct: 1659 ASPAFSPSSPTYSPTSPAIGGRQFSPSS 1686
Score = 78.2 bits (191), Expect = 4e-13
Identities = 44/90 (48%), Positives = 60/90 (66%), Gaps = 9/90 (10%)
Frame = -2
Query: 578 FSPSSPY--SPTSP------SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SP+SP+ SP SP SYSP+SP+ S TSP + +SP +SP SP + TSP YSP+
Sbjct: 1565 YSPTSPFNTSPVSPGYSPSSSYSPSSPNMSVTSPRFMSTSPGFSPQSPAFAITSPAYSPT 1624
Query: 422 SPQF-SPSTGYSPSQPGYSPSSTSQYTPKT 336
SP F + S YSP+ P +SPSS + Y+P +
Sbjct: 1625 SPSFQATSPSYSPTSPRFSPSSPN-YSPSS 1653
Score = 77.8 bits (190), Expect = 6e-13
Identities = 50/104 (48%), Positives = 65/104 (62%), Gaps = 27/104 (25%)
Frame = -2
Query: 581 RFSPSSP--------YSPTSPSYSPTSPSYSPTSPS-----YSPSSPTY---SPSSPYNS 450
RFSPSSP +SP SP++SP+SP+YSPTSP+ +SPSSP+ SP+SP S
Sbjct: 1641 RFSPSSPNYSPSSPNFSPASPAFSPSSPTYSPTSPAIGGRQFSPSSPSSPKYSPASPGWS 1700
Query: 449 GTSPD-YSPSSPQF-----SPSTG-----YSPSQPGYSPSSTSQ 351
TSP+ YSP+SP SP+ G YSP+ P Y+P+S Q
Sbjct: 1701 PTSPEIYSPTSPNIHGSPTSPARGATSPSYSPTSPQYNPTSPRQ 1744
[172][TOP]
>UniRef100_B6H9U6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6H9U6_PENCW
Length = 1733
Score = 100 bits (248), Expect = 1e-19
Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 14/102 (13%)
Frame = -2
Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417
+SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP
Sbjct: 1610 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1669
Query: 416 ----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP S Y+P+ PG+SP+S Y+P + + P
Sbjct: 1670 GGARHLSPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNFSGSP 1711
Score = 95.9 bits (237), Expect = 2e-18
Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 13/86 (15%)
Frame = -2
Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPD 435
+SP+SP +SP SP++ PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+
Sbjct: 1581 YSPTSPGIGMMTSPGFSPASPTFQPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPN 1640
Query: 434 YSPSSPQFSP-STGYSPSQPGYSPSS 360
YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1641 YSPTSPSFSPASPAFSPTSPSYSPTS 1666
Score = 83.6 bits (205), Expect = 1e-14
Identities = 47/87 (54%), Positives = 59/87 (67%), Gaps = 11/87 (12%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY---------SPTSPSYSPSSPTYSPSSPYN-SGTSPDY 432
FSP+SP +SPTSPSYSPTSP+ SPTSP Y+P+SP +SP+SP + S TSP++
Sbjct: 1648 FSPASPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNF 1707
Query: 431 SPSSPQFSPSTGYSPSQPGYSPSSTSQ 351
S SP S YSP+ P YSP+S Q
Sbjct: 1708 S-GSPTSPTSPAYSPTSPAYSPTSPRQ 1733
Score = 70.5 bits (171), Expect = 9e-11
Identities = 45/101 (44%), Positives = 55/101 (54%), Gaps = 26/101 (25%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPS---------------------SPTYSPS 465
F SP + + YSPTSP + SPTSP YSPS SPT+ P+
Sbjct: 1547 FGGFSPAARSPGGYSPTSPFNTSPTSPGYSPSSSYSPTSPGIGMMTSPGFSPASPTFQPT 1606
Query: 464 SPYNSGTSPDY---SPSSPQFSP-STGYSPSQPGYSPSSTS 354
SP S TSP Y SP+SP +SP S G+SP+ P YSP+S S
Sbjct: 1607 SPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPS 1647
[173][TOP]
>UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2AA31_PODAN
Length = 1748
Score = 99.8 bits (247), Expect = 1e-19
Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 6/87 (6%)
Frame = -2
Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-YSPSSPQF 411
+SP+SP SPTSPSYSPTSPSYSP SP++ +SP+YSP+SP S TSPD YSP+SP F
Sbjct: 1652 YSPTSPAQFQSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTF 1711
Query: 410 --SPSTGYSPSQPGYSPSSTSQYTPKT 336
SP SP+ PGYSP+S S ++P+T
Sbjct: 1712 QRSPGQQMSPTSPGYSPTSPS-FSPRT 1737
Score = 97.4 bits (241), Expect = 7e-19
Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 24/116 (20%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSP-------------YNS 450
RF+ S +SP+SPS+SPTSP SPTSPSYSP+SP+YSP+SP + S
Sbjct: 1603 RFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQS 1662
Query: 449 GTSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
TSP YSP+SP +SP S YSP+ P +SP+S Y+P + + PG Q
Sbjct: 1663 PTSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPGQQ 1718
Score = 67.0 bits (162), Expect = 1e-09
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 10/71 (14%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSP-SYSPSSPTY--------SPSSPYNSGTSPDYS 429
+SP+SP + TSPSYSP SP++SPTSP +YSP+SPT+ SP+SP S TSP +S
Sbjct: 1675 YSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPGQQMSPTSPGYSPTSPSFS 1734
Query: 428 PSSPQFSPSTG 396
P +P + +G
Sbjct: 1735 PRTPGRAAGSG 1745
Score = 63.2 bits (152), Expect = 1e-08
Identities = 47/103 (45%), Positives = 57/103 (55%), Gaps = 25/103 (24%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSP-SYSPTSP---SYSPSSPT--YSPSSPY-----NSGTSPDYS 429
S +PY+ TSP PTSP + SPTSP YSP+SP YSP+SP +SP +S
Sbjct: 1554 SSVNPYA-TSPG-RPTSPFTTSPTSPFSYGYSPTSPAAGYSPTSPLIDAGGRFASSPQFS 1611
Query: 428 PSSPQFSP-----------STGYSPSQPGYSPSS---TSQYTP 342
PSSP FSP S YSP+ P YSP+S T Y+P
Sbjct: 1612 PSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAATRHYSP 1654
[174][TOP]
>UniRef100_Q5KGG3 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KGG3_CRYNE
Length = 1786
Score = 99.4 bits (246), Expect = 2e-19
Identities = 55/93 (59%), Positives = 64/93 (68%), Gaps = 13/93 (13%)
Frame = -2
Query: 581 RFSPSSPYSP-----------TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGTSP 438
R SP SP SP TSP YSPTSP YSPTSP++SP+SP+YSP+SP TSP
Sbjct: 1641 RASPYSPTSPAYSPTSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAPFQATSP 1700
Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
YSP+SPQFSP S YSP+ P YSP+S QY+P
Sbjct: 1701 RYSPTSPQFSPTSPTYSPASPAYSPTS-PQYSP 1732
Score = 94.0 bits (232), Expect = 8e-18
Identities = 49/101 (48%), Positives = 60/101 (59%), Gaps = 27/101 (26%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG------------------- 447
S YSPTSP YSPTSP +SPTSPS+SPSSPTYSP+SP G
Sbjct: 1595 SPAYSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSP 1654
Query: 446 -------TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 348
TSP YSP+SP++SP S +SP+ P YSP+S + +
Sbjct: 1655 TSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAPF 1695
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 9/98 (9%)
Frame = -2
Query: 578 FSPSSP-YSPTSPS--------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
FSP+SP YSPTSP+ YSPTSP +SPTSP+YSP+SP YSP+SP S TSP YSP
Sbjct: 1680 FSPTSPSYSPTSPAPFQATSPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSP 1739
Query: 425 SSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
+SP YSP+ P Y ++ + T + + + PG
Sbjct: 1740 TSP------AYSPTSPAYGGAAPNGGTAQQQNGQARPG 1771
Score = 88.6 bits (218), Expect = 3e-16
Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 35/114 (30%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSP----------------SYSPTSPSYSPSSPTYSPSSPYNSG 447
+SP+SP++ TSP+YSPTSP Y TSP+YSP+SP YSP+SP S
Sbjct: 1555 YSPTSPFAVTSPAYSPTSPFAGAAAGAASPWVGRGGYGATSPAYSPTSPQYSPTSPQFSP 1614
Query: 446 TSPDYSPSSPQFSP-------------STGYSPSQPGYSPSS------TSQYTP 342
TSP +SPSSP +SP ++ YSP+ P YSP+S + QY+P
Sbjct: 1615 TSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSPTSPMGGITSPQYSP 1668
Score = 71.2 bits (173), Expect = 5e-11
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP Y ++P + P + +
Sbjct: 1716 YSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYGGAAPNGGTAQQQNGQARPGWGNT 1775
Query: 401 TGYSPS 384
GY S
Sbjct: 1776 GGYGTS 1781
Score = 66.6 bits (161), Expect = 1e-09
Identities = 43/99 (43%), Positives = 56/99 (56%), Gaps = 26/99 (26%)
Frame = -2
Query: 578 FSPSSPYSPTSPS-YSPTSPS-YSPTSPSYSPSSPTYSPSSPY----------------- 456
+ S + SP+ YSP+SP+ YSPTSP ++ +SP YSP+SP+
Sbjct: 1533 YGQSPMHGGMSPAGYSPSSPAGYSPTSP-FAVTSPAYSPTSPFAGAAAGAASPWVGRGGY 1591
Query: 455 ------NSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
S TSP YSP+SPQFSP S +SPS P YSP+S
Sbjct: 1592 GATSPAYSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPAS 1630
[175][TOP]
>UniRef100_Q9HGZ5 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=Q9HGZ5_ASPOR
Length = 1748
Score = 99.0 bits (245), Expect = 2e-19
Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
Frame = -2
Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417
+SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP
Sbjct: 1621 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1680
Query: 416 -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP S Y+P+ PG+SP+S Y+P + + P
Sbjct: 1681 GGAARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1723
Score = 94.4 bits (233), Expect = 6e-18
Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 25/98 (25%)
Frame = -2
Query: 578 FSPSSPYSPT---------------------SPSYSPTSPSYSPTSPSY---SPSSPTYS 471
+SPSS YSPT SPS++PTSP+YSPTSP+Y SP+SP+YS
Sbjct: 1580 YSPSSSYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYS 1639
Query: 470 PSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
P+SP S TSP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1640 PTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1677
Score = 86.7 bits (213), Expect = 1e-15
Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 14/90 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435
FSP+SP +SPTSPSYSPTSP+ SPTSP Y+P+SP +SP+SP S TSP+
Sbjct: 1659 FSPASPAFSPTSPSYSPTSPAIGGAARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1718
Query: 434 Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQ 351
+ SP+SP S GYSP+ P +SPSS Q
Sbjct: 1719 FAGSPTSPGGPTSPGYSPTSPAFSPSSPRQ 1748
Score = 83.2 bits (204), Expect = 1e-14
Identities = 49/91 (53%), Positives = 63/91 (69%), Gaps = 12/91 (13%)
Frame = -2
Query: 578 FSPSSPYS--PTSP------SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SPSSP+S PTSP SYSPTSP + TSP +S +SP +SP+SP + TSP YSP+
Sbjct: 1565 YSPSSPFSANPTSPGYSPSSSYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPT 1624
Query: 422 SP---QFSP-STGYSPSQPGYSPSSTSQYTP 342
SP Q SP S YSP+ PG+SP+S + Y+P
Sbjct: 1625 SPAYGQASPTSPSYSPTSPGFSPTSPN-YSP 1654
Score = 70.1 bits (170), Expect = 1e-10
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Frame = -2
Query: 578 FSPSSPYSPTSPS-YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
FSP++ TSP+ YSP+SP S +PTSP YSPSS +YSP+SP + TSP +S +SP FSP
Sbjct: 1555 FSPAA----TSPAGYSPSSPFSANPTSPGYSPSS-SYSPTSPGMAMTSPRFSMTSPGFSP 1609
Query: 404 -STGYSPSQPGYSPSS 360
S ++P+ P YSP+S
Sbjct: 1610 ASPSFAPTSPAYSPTS 1625
Score = 60.1 bits (144), Expect = 1e-07
Identities = 45/97 (46%), Positives = 57/97 (58%), Gaps = 24/97 (24%)
Frame = -2
Query: 560 YSPTSP---SYSP--TSPS-YSPTSP-SYSPSSPTYSPSSPYN-------------SGTS 441
Y PT +SP TSP+ YSP+SP S +P+SP YSPSS Y+ S TS
Sbjct: 1545 YQPTGGFGGGFSPAATSPAGYSPSSPFSANPTSPGYSPSSSYSPTSPGMAMTSPRFSMTS 1604
Query: 440 PDYSPSSPQFSP-STGYSPSQPGY---SPSSTSQYTP 342
P +SP+SP F+P S YSP+ P Y SP+S S Y+P
Sbjct: 1605 PGFSPASPSFAPTSPAYSPTSPAYGQASPTSPS-YSP 1640
[176][TOP]
>UniRef100_B0XMU6 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XMU6_ASPFC
Length = 1750
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 4/78 (5%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
RF S +SP SPS++PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP F
Sbjct: 1599 RFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSF 1658
Query: 410 SP-STGYSPSQPGYSPSS 360
SP S +SP+ P YSP+S
Sbjct: 1659 SPASPAFSPTSPSYSPTS 1676
Score = 99.0 bits (245), Expect = 2e-19
Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
Frame = -2
Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417
+SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP
Sbjct: 1620 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1679
Query: 416 -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP S Y+P+ PG+SP+S Y+P + + P
Sbjct: 1680 GGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1722
Score = 90.1 bits (222), Expect = 1e-16
Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 17/96 (17%)
Frame = -2
Query: 578 FSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSG 447
+SP+S YSPTSP +SP SPS++PTSP+YSP+SP Y SP+SP S
Sbjct: 1580 YSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSP 1639
Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
TSP +SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 1640 TSPGFSPTSPNYSPTSPSFSPASPAFSPTSPS-YSP 1674
Score = 84.3 bits (207), Expect = 6e-15
Identities = 49/96 (51%), Positives = 63/96 (65%), Gaps = 14/96 (14%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435
FSP+SP +SPTSPSYSPTSP+ SPTSP Y+P+SP +SP+SP S TSP+
Sbjct: 1658 FSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1717
Query: 434 Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTN 333
+ SP+SP S GYSP+ P +SPS Y P ++
Sbjct: 1718 FAGSPTSPGGPTSPGYSPTSPAFSPS----YVPSSS 1749
Score = 68.9 bits (167), Expect = 3e-10
Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Frame = -2
Query: 578 FSPSSPYS--PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+SPSSP+S PTSP YSPTS SYSPTSP +SP + TSP +SP+SP F+P
Sbjct: 1565 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFM--------TSPGFSPASPSFAP 1615
Query: 404 -STGYSPSQPG---YSPSSTSQYTP 342
S YSP+ P SP+S S Y+P
Sbjct: 1616 TSPAYSPTSPAYGQASPTSPS-YSP 1639
[177][TOP]
>UniRef100_A2QAT7 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QAT7_ASPNC
Length = 1747
Score = 99.0 bits (245), Expect = 2e-19
Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
Frame = -2
Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417
+SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP
Sbjct: 1620 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAV 1679
Query: 416 -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP S Y+P+ PG+SP+S Y+P + + P
Sbjct: 1680 GGVGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1722
Score = 93.2 bits (230), Expect = 1e-17
Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 25/98 (25%)
Frame = -2
Query: 578 FSPSSPYSPT---------------------SPSYSPTSPSYSPTSPSY---SPSSPTYS 471
+SP+S YSPT SPS++PTSP+YSPTSP+Y SP+SP+YS
Sbjct: 1579 YSPTSSYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYS 1638
Query: 470 PSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
P+SP S TSP+YSP+SP FSP S +SP+ P YSP+S
Sbjct: 1639 PTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1676
Score = 85.5 bits (210), Expect = 3e-15
Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 14/90 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435
FSP+SP +SPTSPSYSPTSP+ SPTSP Y+P+SP +SP+SP S TSP+
Sbjct: 1658 FSPASPAFSPTSPSYSPTSPAVGGVGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1717
Query: 434 Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQ 351
+ SP+SP S GYSP+ P +SP+S Q
Sbjct: 1718 FAGSPTSPGGPTSPGYSPTSPAFSPTSPRQ 1747
Score = 82.0 bits (201), Expect = 3e-14
Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 13/92 (14%)
Frame = -2
Query: 578 FSPSSPYS--PTSPSYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYNSGTSPDYSP 426
+SPSSP+S PTSP YSPTS SYSPTSP + +SP +SP+SP + TSP YSP
Sbjct: 1564 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSP 1622
Query: 425 SSP---QFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP Q SP S YSP+ PG+SP+S + Y+P
Sbjct: 1623 TSPAYGQASPTSPSYSPTSPGFSPTSPN-YSP 1653
Score = 67.0 bits (162), Expect = 1e-09
Identities = 40/76 (52%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Frame = -2
Query: 578 FSPSSPYSPTSPS-YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
FSP++ TSP+ YSP+SP S +PTSP YSP+S +YSP+SP + TSP + +SP FSP
Sbjct: 1554 FSPAA----TSPAGYSPSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSP 1608
Query: 404 -STGYSPSQPGYSPSS 360
S ++P+ P YSP+S
Sbjct: 1609 ASPSFAPTSPAYSPTS 1624
[178][TOP]
>UniRef100_A1D1U9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D1U9_NEOFI
Length = 1750
Score = 99.0 bits (245), Expect = 2e-19
Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 4/78 (5%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
RF S +SP SPS++PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP F
Sbjct: 1599 RFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSF 1658
Query: 410 SP-STGYSPSQPGYSPSS 360
SP S +SP+ P YSP+S
Sbjct: 1659 SPASPAFSPTSPSYSPTS 1676
Score = 99.0 bits (245), Expect = 2e-19
Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
Frame = -2
Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417
+SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP
Sbjct: 1620 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1679
Query: 416 -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP S Y+P+ PG+SP+S Y+P + + P
Sbjct: 1680 GGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1722
Score = 90.1 bits (222), Expect = 1e-16
Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 17/96 (17%)
Frame = -2
Query: 578 FSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSG 447
+SP+S YSPTSP +SP SPS++PTSP+YSP+SP Y SP+SP S
Sbjct: 1580 YSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSP 1639
Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
TSP +SP+SP +SP S +SP+ P +SP+S S Y+P
Sbjct: 1640 TSPGFSPTSPNYSPTSPSFSPASPAFSPTSPS-YSP 1674
Score = 84.3 bits (207), Expect = 6e-15
Identities = 49/96 (51%), Positives = 63/96 (65%), Gaps = 14/96 (14%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435
FSP+SP +SPTSPSYSPTSP+ SPTSP Y+P+SP +SP+SP S TSP+
Sbjct: 1658 FSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1717
Query: 434 Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTN 333
+ SP+SP S GYSP+ P +SPS Y P ++
Sbjct: 1718 FAGSPTSPGGPTSPGYSPTSPAFSPS----YVPSSS 1749
Score = 68.9 bits (167), Expect = 3e-10
Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Frame = -2
Query: 578 FSPSSPYS--PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
+SPSSP+S PTSP YSPTS SYSPTSP +SP + TSP +SP+SP F+P
Sbjct: 1565 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFM--------TSPGFSPASPSFAP 1615
Query: 404 -STGYSPSQPG---YSPSSTSQYTP 342
S YSP+ P SP+S S Y+P
Sbjct: 1616 TSPAYSPTSPAYGQASPTSPS-YSP 1639
[179][TOP]
>UniRef100_A1CNZ4 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CNZ4_ASPCL
Length = 1765
Score = 99.0 bits (245), Expect = 2e-19
Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
Frame = -2
Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417
+SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP
Sbjct: 1627 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1686
Query: 416 -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP S Y+P+ PG+SP+S Y+P + + P
Sbjct: 1687 GGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1729
Score = 97.1 bits (240), Expect = 9e-19
Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 4/77 (5%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
F S +SP SPS++PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP FS
Sbjct: 1607 FMTSPGFSPVSPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFS 1666
Query: 407 P-STGYSPSQPGYSPSS 360
P S +SP+ P YSP+S
Sbjct: 1667 PASPAFSPTSPSYSPTS 1683
Score = 87.4 bits (215), Expect = 7e-16
Identities = 44/80 (55%), Positives = 59/80 (73%), Gaps = 4/80 (5%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDYSPSSPQFSP-S 402
+SP TSP +SP SPS++PTSP+YSP+SP Y SP+SP S TSP +SP+SP +SP S
Sbjct: 1603 TSPGFMTSPGFSPVSPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTS 1662
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
+SP+ P +SP+S S Y+P
Sbjct: 1663 PSFSPASPAFSPTSPS-YSP 1681
Score = 84.0 bits (206), Expect = 8e-15
Identities = 47/86 (54%), Positives = 59/86 (68%), Gaps = 14/86 (16%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435
FSP+SP +SPTSPSYSPTSP+ SPTSP Y+P+SP +SP+SP S TSP+
Sbjct: 1665 FSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1724
Query: 434 Y--SPSSPQFSPSTGYSPSQPGYSPS 363
+ SP+SP S GYSP+ P +SPS
Sbjct: 1725 FAGSPTSPGGPTSPGYSPTSPAFSPS 1750
Score = 75.9 bits (185), Expect = 2e-12
Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 19/98 (19%)
Frame = -2
Query: 578 FSPSSPYS--PTSPSYSPTSPSYSP-----------------TSPSYSPSSPTYSPSSPY 456
+SP+SP+S PTSP YSPT+ SYSP TSP +SP SP+++P+SP
Sbjct: 1568 YSPTSPFSANPTSPGYSPTT-SYSPIAPGITSPRFNTSPGFMTSPGFSPVSPSFAPTSPA 1626
Query: 455 NSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
S TSP Y +SP SPS YSP+ PG+SP+S + Y+P
Sbjct: 1627 YSPTSPAYGQASPT-SPS--YSPTSPGFSPTSPN-YSP 1660
Score = 75.5 bits (184), Expect = 3e-12
Identities = 43/74 (58%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP SPTSP Y+PTSP +SPTSP +YSP+SP + SP+SP TSP YSP+SP FSPS
Sbjct: 1694 SPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSP-GGPTSPGYSPTSPAFSPS-- 1750
Query: 395 YSPSQPGYSPSSTS 354
Y P P TS
Sbjct: 1751 YVPPPPCLIDDCTS 1764
Score = 58.5 bits (140), Expect = 4e-07
Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSPYSPTSPS-YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
FSP++ TSP+ YSPTSP S +PTSP YSP++ +YSP +P TSP ++ +SP F
Sbjct: 1558 FSPAA----TSPAGYSPTSPFSANPTSPGYSPTT-SYSPIAP--GITSPRFN-TSPGFMT 1609
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
S G+SP P ++P+S + Y+P
Sbjct: 1610 SPGFSPVSPSFAPTSPA-YSP 1629
[180][TOP]
>UniRef100_B3L428 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L428_PLAKH
Length = 2353
Score = 98.6 bits (244), Expect = 3e-19
Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393
S YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP++
Sbjct: 2195 SPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVP 2254
Query: 392 -SPSQPGYSP 366
SPS P YSP
Sbjct: 2255 NSPSSPHYSP 2264
Score = 93.6 bits (231), Expect = 1e-17
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S Y+ TSP YSPTSP YSPTSP Y P+SP YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 2188 SPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 2247
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P + S+ Y+P
Sbjct: 2248 SPTSPVPNSPSSPHYSP 2264
Score = 90.5 bits (223), Expect = 8e-17
Identities = 47/96 (48%), Positives = 61/96 (63%), Gaps = 15/96 (15%)
Frame = -2
Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
+SP+SP +S SP+Y+ TSP YSPTSP YSP+SP Y P+SP S TS
Sbjct: 2164 YSPTSPKNQMDEMNPNMMKYHSVLSPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTS 2223
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
P YSP+SP++SP S YSP+ P YSP+S +P +
Sbjct: 2224 PKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNSPSS 2259
Score = 84.3 bits (207), Expect = 6e-15
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP P+SP +SP YSP +SP+
Sbjct: 2218 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPV--PNSP----SSPHYSPYAIASPK 2271
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
FSP S YS S P Y SS ++
Sbjct: 2272 FSPTSPAYSISSPVYDQSSNAR 2293
Score = 59.3 bits (142), Expect = 2e-07
Identities = 48/137 (35%), Positives = 60/137 (43%), Gaps = 59/137 (43%)
Frame = -2
Query: 575 SPSSPYSPTSPS--YSPT--------SPSYSPTSPS---------------------YSP 489
SP+ YSP P +SP SPSYSPTSP+ YSP
Sbjct: 2107 SPAMLYSPNRPLDIFSPKQQTQNNIYSPSYSPTSPTYHLSSNVNAGGSSGLNDTKAFYSP 2166
Query: 488 ---------------------------SSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
+SP YSP+SP S TSP Y P+SP++SP S Y
Sbjct: 2167 TSPKNQMDEMNPNMMKYHSVLSPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKY 2226
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+S +Y+P
Sbjct: 2227 SPTSPKYSPTS-PKYSP 2242
Score = 55.1 bits (131), Expect = 4e-06
Identities = 39/107 (36%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSP------------------SYSPTSPSYSPSSPTYSPSSP 459
++SP+SP YSPTSP YSPTSP +SPTSP+YS SSP Y SS
Sbjct: 2232 KYSPTSPKYSPTSPQYSPTSPVPNSPSSPHYSPYAIASPKFSPTSPAYSISSPVYDQSS- 2290
Query: 458 YNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + + P SP + SP Q S ++P N D+
Sbjct: 2291 --NARNRNQHPLSPAYILQ---SPVQVKQHIQDVSVFSPIQQANADE 2332
[181][TOP]
>UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4P7Q0_USTMA
Length = 1774
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 10/83 (12%)
Frame = -2
Query: 578 FSPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPT---YSPSSP---YNSGTSPDYSP 426
+SP+SP TSPSYSPTSPSYSP SP+YSPSSP YSPSSP Y + TSP YSP
Sbjct: 1594 YSPTSPRIFGGATSPSYSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSP 1653
Query: 425 SSPQFSP-STGYSPSQPGYSPSS 360
+SP+FSP S YSP+ P Y+P+S
Sbjct: 1654 ASPKFSPTSPNYSPASPAYTPTS 1676
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/93 (50%), Positives = 62/93 (66%), Gaps = 14/93 (15%)
Frame = -2
Query: 578 FSPSSP-----------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS--P 438
+SPSSP YSP SP +SPTSP+YSP SP+Y+P+SP YSP+SP +G
Sbjct: 1634 YSPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPASPAYTPTSPVYSPTSPAMAGRGGGK 1693
Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP+SP +SP S YSP+ P +SP+S QY+P
Sbjct: 1694 GFSPTSPAYSPTSPQYSPASPAFSPTS-PQYSP 1725
Score = 85.9 bits (211), Expect = 2e-15
Identities = 48/103 (46%), Positives = 61/103 (59%), Gaps = 24/103 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSP--------------------TSPSYSPTSPSYSPSSPTYSPSS 462
+SP+SP YSP SP+YSP TSP YSP SP +SP+SP YSP+S
Sbjct: 1610 YSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPAS 1669
Query: 461 PYNSGTSPDYSPSSPQFS---PSTGYSPSQPGYSPSSTSQYTP 342
P + TSP YSP+SP + G+SP+ P YSP+S QY+P
Sbjct: 1670 PAYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTS-PQYSP 1711
Score = 84.0 bits (206), Expect = 8e-15
Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 10/83 (12%)
Frame = -2
Query: 578 FSPSSP----------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SP+SP +SPTSP+YSPTSP YSP SP++SP+SP YSP+SP S TSP YS
Sbjct: 1679 YSPTSPAMAGRGGGKGFSPTSPAYSPTSPQYSPASPAFSPTSPQYSPASPQYSPTSPQYS 1738
Query: 428 PSSPQFSPSTGYSPSQPGYSPSS 360
P+SP G S PG + +S
Sbjct: 1739 PTSPAMGMG-GASAGGPGAAAAS 1760
Score = 72.4 bits (176), Expect = 2e-11
Identities = 43/96 (44%), Positives = 50/96 (52%), Gaps = 24/96 (25%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPS------------------SPTYSPSSP--Y 456
+P SP +SP SP Y PTSP Y+ S SP YSP+SP +
Sbjct: 1543 TPLGAQSPAGYGFSPVSPGYVPTSPGYATSPAGALGGMSPWTGNMGATSPAYSPTSPRIF 1602
Query: 455 NSGTSPDYSPSSPQFSP-STGYSPSQP---GYSPSS 360
TSP YSP+SP +SP S YSPS P GYSPSS
Sbjct: 1603 GGATSPSYSPTSPSYSPASPNYSPSSPAGAGYSPSS 1638
[182][TOP]
>UniRef100_Q2HDK0 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2HDK0_CHAGB
Length = 1756
Score = 98.2 bits (243), Expect = 4e-19
Identities = 53/87 (60%), Positives = 65/87 (74%), Gaps = 6/87 (6%)
Frame = -2
Query: 578 FSPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-YSPSSPQF 411
+SP+SP SPTSPSYSPTSPSYSP SP+ +SP+YSP+SP S TSPD YSP+SP F
Sbjct: 1650 YSPTSPQQFNSPTSPSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSF 1709
Query: 410 --SPSTGYSPSQPGYSPSSTSQYTPKT 336
SP SP+ PGYSP+S S ++P+T
Sbjct: 1710 HRSPGQQMSPTSPGYSPTSPS-FSPRT 1735
Score = 96.3 bits (238), Expect = 2e-18
Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 24/116 (20%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSP-------------YNS 450
R++ S +SP+SPS+SPTSP SPTSP+YSP+SP+YSP+SP +NS
Sbjct: 1601 RYASSPQFSPSSPSFSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNS 1660
Query: 449 GTSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
TSP YSP+SP +SP S YSP+ P +SP+S Y+P + PG Q
Sbjct: 1661 PTSPSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQ 1716
Score = 91.7 bits (226), Expect = 4e-17
Identities = 51/105 (48%), Positives = 63/105 (60%), Gaps = 26/105 (24%)
Frame = -2
Query: 578 FSPSSPY----SPTSPSYSPTSPSYSP--------------------TSPSYSPSSPTYS 471
FSP+SP SPTSP+YSPTSPSYSP TSPSYSP+SP+YS
Sbjct: 1615 FSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNSPTSPSYSPTSPSYS 1674
Query: 470 PSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 342
P+SP TSP YSP+SP +SP++ YSP+ P + S Q +P
Sbjct: 1675 PASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSP 1719
Score = 64.7 bits (156), Expect = 5e-09
Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 21/88 (23%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSP-SYSPTSPSY--------SPSSPTYSPSSPYNS 450
+SP+SP YSP SP++SPTSP +YSPTSPS+ SP+SP YSP
Sbjct: 1673 YSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSPTSPGYSP------ 1726
Query: 449 GTSPDYSPSSPQFSPSTG----YSPSQP 378
TSP +SP +P PS G YSP+ P
Sbjct: 1727 -TSPSFSPRTPGRGPSGGSGDQYSPTSP 1753
[183][TOP]
>UniRef100_B8M2Y2 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8M2Y2_TALSN
Length = 1755
Score = 98.2 bits (243), Expect = 4e-19
Identities = 54/111 (48%), Positives = 65/111 (58%), Gaps = 23/111 (20%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
FSPSSP YSPTSPSY SPSYSPTSP +SPSSP YSPSSP S +SP +SP+
Sbjct: 1606 FSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPT 1665
Query: 422 SPQFSP---------------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP +SP S YSP+ P +SP+S Y+P + + P
Sbjct: 1666 SPTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSPTSPEIYSPTSPNIHGSP 1716
Score = 90.5 bits (223), Expect = 8e-17
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-P 405
RF S +SP+SP++ TSP+YSPTSPSY +SP+YSP+SP S +SP+YSPSSP S
Sbjct: 1599 RFVTSPGFSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLS 1658
Query: 404 STGYSPSQPGYSPSS-----TSQYTPKTN 333
S +SP+ P YSP+S T Q++ T+
Sbjct: 1659 SPAFSPTSPTYSPTSPAIGGTRQFSSPTS 1687
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 25/104 (24%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-------YNSGTSPDYSPS 423
+SP+SP +SP+SP+YSP+SP+ S +SP++SP+SPTYSP+SP ++S TSP YSP+
Sbjct: 1634 YSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPA 1693
Query: 422 SPQFSPSTGY-----------SPSQP---GYSPS---STSQYTP 342
SP +SP++ SP+ P G SPS ++ QY P
Sbjct: 1694 SPAWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNP 1737
Score = 76.3 bits (186), Expect = 2e-12
Identities = 47/112 (41%), Positives = 59/112 (52%), Gaps = 39/112 (34%)
Frame = -2
Query: 581 RFSPSSP---------------YSPTSPSYSPTSPSY-------SPTSPSYSPSSPTY-- 474
RFSPSSP +SPTSP+YSPTSP+ SPTSP YSP+SP +
Sbjct: 1640 RFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSP 1699
Query: 473 ---------------SPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPS 363
SP+SP GTSP YSP+SPQ++P+ Y + PG P+
Sbjct: 1700 TSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNPT--YVYTNPGEVPA 1749
Score = 72.8 bits (177), Expect = 2e-11
Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 24/99 (24%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSP-------TSPSYSPTSPSYSPSSPTYSPSSP----- 459
+SP+SP YSPTSP +SP +SP+ S +SP++SP+SPTYSP+SP
Sbjct: 1620 YSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGT 1679
Query: 458 --YNSGTSPDYSPSSPQFSPSTG--YSPSQPGYSPSSTS 354
++S TSP YSP+SP +SP++ YSP+ P S TS
Sbjct: 1680 RQFSSPTSPKYSPASPAWSPTSPEIYSPTSPNIHGSPTS 1718
Score = 59.3 bits (142), Expect = 2e-07
Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPS-YSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
SP+SP YSP SP++SPTSP YSPTSP+ SP+SP +SP S TSP Y+P+ +
Sbjct: 1684 SPTSPKYSPASPAWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNPTYVYTN 1743
Query: 407 PSTGYSP 387
P +P
Sbjct: 1744 PGEVPAP 1750
[184][TOP]
>UniRef100_Q0D054 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0D054_ASPTN
Length = 1742
Score = 97.8 bits (242), Expect = 5e-19
Identities = 51/93 (54%), Positives = 63/93 (67%), Gaps = 14/93 (15%)
Frame = -2
Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417
+SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP SP+SP S TSP YSP+SP
Sbjct: 1620 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPSYSPTSPAL 1679
Query: 416 ----QFSP----STGYSPSQPGYSPSSTSQYTP 342
SP S Y+P+ PG+SP+S Y+P
Sbjct: 1680 GAGRNMSPTSPTSPKYTPTSPGWSPTSPQSYSP 1712
Score = 90.9 bits (224), Expect = 7e-17
Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 17/90 (18%)
Frame = -2
Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSG 447
+SP+SP +SP SP++ PTSP+YSPTSP+Y SP+SP+YSP+SP S
Sbjct: 1587 YSPTSPGMGITSPRMTSPGFSPASPAFGPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSP 1646
Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
TSP+YSP+SP SP S +SP+ P YSP+S
Sbjct: 1647 TSPNYSPTSPNLSPASPVFSPTSPSYSPTS 1676
Score = 86.3 bits (212), Expect = 2e-15
Identities = 51/95 (53%), Positives = 64/95 (67%), Gaps = 16/95 (16%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTY---------SPSSPYNSGTSPDYS 429
FSP+SP YSPTSP+ SP SP +SPTSPSYSP+SP SP+SP + TSP +S
Sbjct: 1644 FSPTSPNYSPTSPNLSPASPVFSPTSPSYSPTSPALGAGRNMSPTSPTSPKYTPTSPGWS 1703
Query: 428 PSSPQF----SPSTGYSPSQPG--YSPSSTSQYTP 342
P+SPQ SP+ G SP+ PG YSP+S + Y+P
Sbjct: 1704 PTSPQSYSPTSPNIGGSPTSPGGAYSPTSPT-YSP 1737
Score = 77.4 bits (189), Expect = 7e-13
Identities = 43/79 (54%), Positives = 54/79 (68%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SPSS YSPTSP TSP TSP +SP+SP + P+SP S TSP Y +SP SPS
Sbjct: 1581 YSPSSSYSPTSPGMGITSPRM--TSPGFSPASPAFGPTSPAYSPTSPAYGQASPT-SPS- 1636
Query: 398 GYSPSQPGYSPSSTSQYTP 342
YSP+ PG+SP+S + Y+P
Sbjct: 1637 -YSPTSPGFSPTSPN-YSP 1653
Score = 75.5 bits (184), Expect = 3e-12
Identities = 47/88 (53%), Positives = 56/88 (63%), Gaps = 13/88 (14%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSY------SPTSPSYSPSSPTYSPSSPYNSGTSP-DYSPSS 420
SP+SP +SPTSPSYSPTSP+ SPT SP+SP Y+P+SP S TSP YSP+S
Sbjct: 1659 SPASPVFSPTSPSYSPTSPALGAGRNMSPT----SPTSPKYTPTSPGWSPTSPQSYSPTS 1714
Query: 419 PQF-----SPSTGYSPSQPGYSPSSTSQ 351
P SP YSP+ P YSP+S Q
Sbjct: 1715 PNIGGSPTSPGGAYSPTSPTYSPTSPRQ 1742
[185][TOP]
>UniRef100_A6SI63 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6SI63_BOTFB
Length = 1742
Score = 97.4 bits (241), Expect = 7e-19
Identities = 56/103 (54%), Positives = 68/103 (66%), Gaps = 19/103 (18%)
Frame = -2
Query: 578 FSPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTY-----------SPSSPYNSGTS 441
+SP+SP SPTSPSYSPTSPSYSPTSP+YSP+SP Y SP+SP S TS
Sbjct: 1640 YSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTS 1699
Query: 440 PDYSPSSPQF---SPSTGYSPSQPGYSPSST--SQYTPKTNDN 327
P++SPSSPQ S S YSP+ P YSP+S S +P+ +N
Sbjct: 1700 PNWSPSSPQHQGNSTSPKYSPTSPSYSPTSPNFSPTSPRGGNN 1742
Score = 94.4 bits (233), Expect = 6e-18
Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 16/104 (15%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
+SP+SP SPTSPSYSPTSP+YSPTSP+ SP+SP+YSP+SP S TSP+YSP+SP +
Sbjct: 1618 YSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNY 1677
Query: 410 -----SPSTG-------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP +G YSP+ P +SPSS P+ N P
Sbjct: 1678 AGNKVSPGSGLSPTSPVYSPTSPNWSPSS-----PQHQGNSTSP 1716
Score = 90.5 bits (223), Expect = 8e-17
Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 17/96 (17%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TS 441
+SP+SP YSPTSP+ SPTSPSYSPTSPSYSP+SP YSP+SP +G TS
Sbjct: 1633 YSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTS 1692
Query: 440 PDYSPSSPQFSPSTGY---SPSQPGYSPSSTSQYTP 342
P YSP+SP +SPS+ + + P YSP+S S Y+P
Sbjct: 1693 PVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPS-YSP 1727
Score = 87.4 bits (215), Expect = 7e-16
Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 36/126 (28%)
Frame = -2
Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPT---------------------SPSYSPSSPTYSP 468
+SP+SP+ SP+SP++SP+SP YSPT SP+++P+SP YSP
Sbjct: 1561 YSPTSPFNASPSSPNFSPSSPGYSPTSPMMGGGASPGYAVSPRFSPVSPAFTPTSPAYSP 1620
Query: 467 SSP-YNSGTSPDYSPSSPQFSP----------STGYSPSQPGYSPSST--SQYTPKTNDN 327
+SP + S TSP YSP+SP +SP S YSP+ P YSP+S S +P N
Sbjct: 1621 TSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGN 1680
Query: 326 KDDPGT 309
K PG+
Sbjct: 1681 KVSPGS 1686
Score = 70.1 bits (170), Expect = 1e-10
Identities = 33/58 (56%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
+ SP S SPTSP YSPTSP++SP+SP + + +SP YSP+SP S TSP++SP+SP+
Sbjct: 1681 KVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPSYSPTSPNFSPTSPR 1738
[186][TOP]
>UniRef100_C6F1F1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F1_PLAVI
Length = 211
Score = 96.7 bits (239), Expect = 1e-18
Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SPS+
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 112
Query: 392 -SPSQPGYSP 366
+PS P YSP
Sbjct: 113 NNPSSPHYSP 122
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 15/94 (15%)
Frame = -2
Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
+SP+SP +S SP YS TSP YSPTSP YSP+SP YSP+SP S TS
Sbjct: 29 YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 88
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SP++SP S YSPS P + S+ Y+P
Sbjct: 89 PKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 122
Score = 82.8 bits (203), Expect = 2e-14
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP P++P +SP YSP +SP+
Sbjct: 76 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 129
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
FSP S YS S P Y S ++
Sbjct: 130 FSPTSPAYSISSPVYDQSGNAR 151
Score = 79.0 bits (193), Expect = 3e-13
Identities = 46/99 (46%), Positives = 55/99 (55%), Gaps = 21/99 (21%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 450
SS + T YSPTSP+ YS TSP YSP+SP YSP+SP S
Sbjct: 19 SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYS 78
Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
TSP YSP+SP++SP S YSP+ P YSPSS P +
Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 117
[187][TOP]
>UniRef100_A5K7P4 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K7P4_PLAVI
Length = 2379
Score = 96.7 bits (239), Expect = 1e-18
Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SPS+
Sbjct: 2221 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 2280
Query: 392 -SPSQPGYSP 366
+PS P YSP
Sbjct: 2281 NNPSSPHYSP 2290
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 15/94 (15%)
Frame = -2
Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
+SP+SP +S SP YS TSP YSPTSP YSP+SP YSP+SP S TS
Sbjct: 2197 YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 2256
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SP++SP S YSPS P + S+ Y+P
Sbjct: 2257 PKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 2290
Score = 82.8 bits (203), Expect = 2e-14
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP P++P +SP YSP +SP+
Sbjct: 2244 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 2297
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
FSP S YS S P Y S ++
Sbjct: 2298 FSPTSPAYSISSPVYDQSGNAR 2319
Score = 62.4 bits (150), Expect = 2e-08
Identities = 50/139 (35%), Positives = 62/139 (44%), Gaps = 59/139 (42%)
Frame = -2
Query: 575 SPSSPYSPTSPS--YSPT--------SPSYSPTSPS---------------------YSP 489
SP+ YSP +SP SPSYSPTSP+ YSP
Sbjct: 2140 SPAMLYSPNRALDLFSPKQQTQNNIYSPSYSPTSPTYHLTNPASGGGSSGLNGTKAYYSP 2199
Query: 488 SSPT---------------------------YSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
+SPT YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 2200 TSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2259
Query: 392 SPSQPGYSPSSTSQYTPKT 336
SP+ P YSP+S QY+P +
Sbjct: 2260 SPTSPKYSPTS-PQYSPSS 2277
[188][TOP]
>UniRef100_UPI000023F34A hypothetical protein FG00916.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F34A
Length = 1758
Score = 96.3 bits (238), Expect = 2e-18
Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 29/121 (23%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSP---SYSPSSPTYSPSSP-------------YN 453
R+ P+SP +SP+SPS+SPTSP PTSP SYSP+SP+YSP+SP +N
Sbjct: 1601 RYGPTSPSFSPSSPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFN 1660
Query: 452 SGTSPDYSPSSPQFSP------------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
S TSP YSP+SP +SP S YSP+ P +SP+S Y+P + + P T
Sbjct: 1661 SPTSPSYSPASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTT 1720
Query: 308 Q 306
Q
Sbjct: 1721 Q 1721
Score = 93.2 bits (230), Expect = 1e-17
Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 20/98 (20%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSY-------------SPTSPSYSPSSPTYSPSSPYNSG--- 447
SP+SP YSPTSPSYSPTSPS SPTSPSYSP+SP YSP+SP G
Sbjct: 1627 SPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPTSPSYSPASPNYSPTSPNVHGAGG 1686
Query: 446 -TSPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 342
TSP YSP+SP +SP++ YSP+ P + S T+Q +P
Sbjct: 1687 PTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSP 1724
Score = 92.0 bits (227), Expect = 3e-17
Identities = 54/100 (54%), Positives = 70/100 (70%), Gaps = 10/100 (10%)
Frame = -2
Query: 578 FSPSSPY---SPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPD-YSPS 423
+SP+SP SPTSPSYSP SP+YSPTSP+ P+SP+YSP+SP S TSP+ YSP+
Sbjct: 1651 YSPTSPAQFNSPTSPSYSPASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPT 1710
Query: 422 SPQF--SPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
SP F SP+T SP+ P YSP+S + ++P+T PGT
Sbjct: 1711 SPTFQRSPTTQQSPTSPSYSPTSPA-FSPRT----PGPGT 1745
Score = 67.0 bits (162), Expect = 1e-09
Identities = 46/113 (40%), Positives = 58/113 (51%), Gaps = 25/113 (22%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPT--YSPSSPYNSG--------TSPDY 432
F ++P SP + + S SPTSP SYSP+SP YSP+SP G TSP +
Sbjct: 1550 FGGTTPMSPYNRGAASPFSSTSPTSPFSYSPTSPNMGYSPTSPLIDGGGMGRYGPTSPSF 1609
Query: 431 SPSSPQFSP-----------STGYSPSQPGYSPSSTS---QYTPKTNDNKDDP 315
SPSSP FSP S YSP+ P YSP+S S Y+P + + P
Sbjct: 1610 SPSSPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSP 1662
Score = 64.3 bits (155), Expect = 7e-09
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 10/64 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSP-SYSPTSPSY--------SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429
+SP+SP +SPTSP +YSPTSP++ SPTSPSYSP+SP +SP +P + YS
Sbjct: 1692 YSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSPTSPSYSPTSPAFSPRTPGPGTSGNQYS 1751
Query: 428 PSSP 417
P+SP
Sbjct: 1752 PNSP 1755
Score = 63.5 bits (153), Expect = 1e-08
Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 10/68 (14%)
Frame = -2
Query: 572 PSSP-YSPTSPSYSPTSP-SYSPTSPSY--------SPSSPTYSPSSPYNSGTSPDYSPS 423
P+SP YSP SPS+SPTSP +YSPTSP++ SP+SP+YSP+SP S +P S
Sbjct: 1687 PTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSPTSPSYSPTSPAFSPRTPGPGTS 1746
Query: 422 SPQFSPST 399
Q+SP++
Sbjct: 1747 GNQYSPNS 1754
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN 453
SP++ SPTSPSYSPTSP++SP +P S YSP+SP N
Sbjct: 1717 SPTTQQSPTSPSYSPTSPAFSPRTPGPGTSGNQYSPNSPSN 1757
[189][TOP]
>UniRef100_C6F0A4 RNA polymerase II (Fragment) n=2 Tax=Plasmodium (Laverania)
RepID=C6F0A4_PLAFA
Length = 202
Score = 96.3 bits (238), Expect = 2e-18
Identities = 47/76 (61%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP+
Sbjct: 40 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 99
Query: 401 T--GYSPSQPGYSPSS 360
+ + + P YSP S
Sbjct: 100 SPVAQNIASPNYSPYS 115
Score = 94.4 bits (233), Expect = 6e-18
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 96
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P ++ Y+P
Sbjct: 97 SPTSPVAQNIASPNYSP 113
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89
Query: 392 SPSQPGYSPSS 360
SP+ P YSP+S
Sbjct: 90 SPTSPKYSPTS 100
Score = 83.6 bits (205), Expect = 1e-14
Identities = 48/99 (48%), Positives = 61/99 (61%), Gaps = 20/99 (20%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPS------------------YSPTSPSYSPSSPTYSPSSPY 456
+SP+SP Y+ + YSPTSP YS TSP YSP+SP YSP+SP
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 455 NSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
S TSP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 98
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S TSP
Sbjct: 67 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 126
Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330
YS SSP + S + P P Y S Q D
Sbjct: 127 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 165
[190][TOP]
>UniRef100_A7EKT1 DNA-directed RNA polymerase n=2 Tax=Sclerotinia sclerotiorum
RepID=A7EKT1_SCLS1
Length = 1746
Score = 96.3 bits (238), Expect = 2e-18
Identities = 55/103 (53%), Positives = 68/103 (66%), Gaps = 19/103 (18%)
Frame = -2
Query: 578 FSPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTY-----------SPSSPYNSGTS 441
+SP+SP SPTSPSYSPTSPSYSPTSP+YSP+SP Y SP+SP S TS
Sbjct: 1644 YSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTS 1703
Query: 440 PDYSPSSPQF---SPSTGYSPSQPGYSPSST--SQYTPKTNDN 327
P++SPSSPQ + S YSP+ P YSP+S S +P+ +N
Sbjct: 1704 PNWSPSSPQHQGNNTSPKYSPTSPSYSPTSPNFSPTSPRGGNN 1746
Score = 94.4 bits (233), Expect = 6e-18
Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 16/104 (15%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
+SP+SP SPTSPSYSPTSP+YSPTSP+ SP+SP+YSP+SP S TSP+YSP+SP +
Sbjct: 1622 YSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNY 1681
Query: 410 -----SPSTG-------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP +G YSP+ P +SPSS P+ N P
Sbjct: 1682 AGNKVSPGSGLSPTSPVYSPTSPNWSPSS-----PQHQGNNTSP 1720
Score = 90.1 bits (222), Expect = 1e-16
Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 17/96 (17%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TS 441
+SP+SP YSPTSP+ SPTSPSYSPTSPSYSP+SP YSP+SP +G TS
Sbjct: 1637 YSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTS 1696
Query: 440 PDYSPSSPQFSPSTGY---SPSQPGYSPSSTSQYTP 342
P YSP+SP +SPS+ + + P YSP+S S Y+P
Sbjct: 1697 PVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPS-YSP 1731
Score = 88.6 bits (218), Expect = 3e-16
Identities = 53/126 (42%), Positives = 70/126 (55%), Gaps = 36/126 (28%)
Frame = -2
Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPT---------------------SPSYSPSSPTYSP 468
+SP+SP+ SPTSP +SP+SP YSPT SP+++P+SP YSP
Sbjct: 1565 YSPTSPFNASPTSPQFSPSSPGYSPTSPMMGGGASPGYSVSPRFSPVSPAFTPTSPAYSP 1624
Query: 467 SSP-YNSGTSPDYSPSSPQFSP----------STGYSPSQPGYSPSST--SQYTPKTNDN 327
+SP + S TSP YSP+SP +SP S YSP+ P YSP+S S +P N
Sbjct: 1625 TSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGN 1684
Query: 326 KDDPGT 309
K PG+
Sbjct: 1685 KVSPGS 1690
Score = 69.7 bits (169), Expect = 2e-10
Identities = 33/58 (56%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
+ SP S SPTSP YSPTSP++SP+SP + + +SP YSP+SP S TSP++SP+SP+
Sbjct: 1685 KVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPSYSPTSPNFSPTSPR 1742
[191][TOP]
>UniRef100_P14248 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Plasmodium
falciparum CDC/Honduras RepID=RPB1_PLAFD
Length = 2452
Score = 96.3 bits (238), Expect = 2e-18
Identities = 47/76 (61%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP+
Sbjct: 2290 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2349
Query: 401 T--GYSPSQPGYSPSS 360
+ + + P YSP S
Sbjct: 2350 SPVAQNIASPNYSPYS 2365
Score = 94.4 bits (233), Expect = 6e-18
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 2287 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2346
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P ++ Y+P
Sbjct: 2347 SPTSPVAQNIASPNYSP 2363
Score = 93.2 bits (230), Expect = 1e-17
Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 2280 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2339
Query: 392 SPSQPGYSPSS 360
SP+ P YSP+S
Sbjct: 2340 SPTSPKYSPTS 2350
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S TSP
Sbjct: 2317 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 2376
Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330
YS SSP + S + P P Y S Q D
Sbjct: 2377 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 2415
Score = 78.2 bits (191), Expect = 4e-13
Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 12/91 (13%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDY 432
+SPS YSPTSP+Y+ + YSPTSP Y+ SP YS +SP S TSP Y
Sbjct: 2247 YSPS--YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKY 2304
Query: 431 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 2305 SPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2334
Score = 77.4 bits (189), Expect = 7e-13
Identities = 47/110 (42%), Positives = 59/110 (53%), Gaps = 33/110 (30%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPS--------------------------------YSPTSPSYSP 489
P ++ SPSYSPTSP+ YS TSP YSP
Sbjct: 2240 PQINHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSP 2299
Query: 488 SSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
+SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+S +Y+P
Sbjct: 2300 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2348
[192][TOP]
>UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SR21_9PEZI
Length = 1756
Score = 95.5 bits (236), Expect = 3e-18
Identities = 56/113 (49%), Positives = 70/113 (61%), Gaps = 21/113 (18%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPS---YSPTSPSYSPSSPT----YSPSSP--YNSGTSPDY 432
+FSPSSP +SPTSP + PTSP+ YSPTSPSYSP+SPT YSP+SP +NS TSP Y
Sbjct: 1606 QFSPSSPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSY 1665
Query: 431 SPSSPQFSP-----------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
SP+SP +SP S YSP+ P +SP+S T+ + P Q
Sbjct: 1666 SPASPSYSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHSYSPTSPSFQRPAMQ 1718
Score = 90.1 bits (222), Expect = 1e-16
Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 20/109 (18%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPS---YSPSSPTYSPSSP-------------YNS 450
R++ S +SP+SPS+SPTSP + PTSP+ YSP+SP+YSP+SP +NS
Sbjct: 1600 RYATSPQFSPSSPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNS 1659
Query: 449 GTSPDYSPSSPQFSPST----GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
TSP YSP+SP +SP++ G P+ P YSP+S S ++P + ++ P
Sbjct: 1660 PTSPSYSPASPSYSPTSPNLHGAGPTSPSYSPASPS-WSPTSPEHSYSP 1707
Score = 88.2 bits (217), Expect = 4e-16
Identities = 51/107 (47%), Positives = 64/107 (59%), Gaps = 20/107 (18%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSY-------------SPTSPSYSPSSPTYSPSSPYNSG--- 447
SP+SP YSPTSPSYSPTSP+ SPTSPSYSP+SP+YSP+SP G
Sbjct: 1625 SPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYSPASPSYSPTSPNLHGAGP 1684
Query: 446 TSPDYSPSSPQFSPST---GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
TSP YSP+SP +SP++ YSP+ P + + Q N + P
Sbjct: 1685 TSPSYSPASPSWSPTSPEHSYSPTSPSFQRPAMQQSPTSPNYSPTSP 1731
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
SP+SP YSP SPSYSPTSP+ PTSPSYSP+SP++SP+SP +S YSP+SP F
Sbjct: 1659 SPTSPSYSPASPSYSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHS-----YSPTSPSFQ 1713
Query: 407 -PSTGYSPSQPGYSPSSTSQYTPKT 336
P+ SP+ P YSP+S S ++P+T
Sbjct: 1714 RPAMQQSPTSPNYSPTSPS-FSPRT 1737
Score = 62.0 bits (149), Expect = 3e-08
Identities = 42/89 (47%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Frame = -2
Query: 581 RFSPSSPY--SPTSPSYS-PTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSP 417
R +SP+ SPTSP S + YSPTSP YSP+SP + Y TSP +SPSSP
Sbjct: 1555 RAGATSPFTTSPTSPFSSFAGAGGYSPTSPGGGYSPTSPLMDGGARY--ATSPQFSPSSP 1612
Query: 416 QFSPSTGY----SPSQPGYSPSSTSQYTP 342
FSP++ SP+ P YSP+S S Y+P
Sbjct: 1613 SFSPTSPVHRPTSPASPNYSPTSPS-YSP 1640
Score = 59.7 bits (143), Expect = 2e-07
Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 10/55 (18%)
Frame = -2
Query: 578 FSPSSP-YSPTSP--SYSPTSPSY-------SPTSPSYSPSSPTYSPSSPYNSGT 444
+SP+SP +SPTSP SYSPTSPS+ SPTSP+YSP+SP++SP +P SG+
Sbjct: 1689 YSPASPSWSPTSPEHSYSPTSPSFQRPAMQQSPTSPNYSPTSPSFSPRTPGPSGS 1743
[193][TOP]
>UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W4S0_PYRTR
Length = 1742
Score = 94.7 bits (234), Expect = 5e-18
Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 8/88 (9%)
Frame = -2
Query: 581 RFSPSSP---YSPTSPSYSPTSPSY-SPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSP 417
RF+ +SP SPTSP YSPTSP Y SPTSPSYSP+SP YSP+SP S TSP+YSP+SP
Sbjct: 1595 RFAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSP 1654
Query: 416 QF---SPSTGYSPSQPGYSPSSTSQYTP 342
F + S YSP+ P YSP+S QY+P
Sbjct: 1655 TFMGGATSPAYSPTSPQYSPTS-PQYSP 1681
Score = 92.0 bits (227), Expect = 3e-17
Identities = 50/88 (56%), Positives = 61/88 (69%), Gaps = 15/88 (17%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
+SP+SP YSPTSP YSPTSP+YSPTSP++ +SP YSP+SP S TSP YSP+SPQ+
Sbjct: 1627 YSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTSPQY 1686
Query: 410 -------SP----STGYSPSQPGYSPSS 360
SP S YSP+ P YSP+S
Sbjct: 1687 QATSDRRSPTSPTSPQYSPTSPRYSPTS 1714
Score = 91.3 bits (225), Expect = 5e-17
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 5/78 (6%)
Frame = -2
Query: 578 FSPSSPY--SPTSPSYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSG--TSPDYSPSSPQ 414
+SP+SP SPTSPSYSPTSP+ YSPTSP YSP+SP YSP+SP G TSP YSP+SPQ
Sbjct: 1612 YSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQ 1671
Query: 413 FSPSTGYSPSQPGYSPSS 360
YSP+ P YSP+S
Sbjct: 1672 ------YSPTSPQYSPTS 1683
Score = 88.6 bits (218), Expect = 3e-16
Identities = 55/102 (53%), Positives = 64/102 (62%), Gaps = 25/102 (24%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPS---------YSPTSPSYSPTSPSYSPSSPTY----------SPSS 462
++SP+SP YSPTSP+ YSPTSP YSPTSP YSP+SP Y SP+S
Sbjct: 1641 QYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTSPQYQATSDRRSPTSPTS 1700
Query: 461 PYNSGTSPDYSPSSP--QFSP-STGYSPSQPG--YSPSSTSQ 351
P S TSP YSP+SP FSP S YSP+ PG YSP+S Q
Sbjct: 1701 PQYSPTSPRYSPTSPAGSFSPTSPRYSPTSPGPAYSPTSPKQ 1742
Score = 79.0 bits (193), Expect = 3e-13
Identities = 45/87 (51%), Positives = 53/87 (60%), Gaps = 15/87 (17%)
Frame = -2
Query: 557 SPTSPSYSPTSPSYSPTSPS--------------YSPSSPTYSPSSP-YNSGTSPDYSPS 423
SP SP +SPTSP YSPTSP SP+SP YSP+SP Y S TSP YSP+
Sbjct: 1571 SPVSPGFSPTSPGYSPTSPGTASPRFAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSPT 1630
Query: 422 SPQFSPSTGYSPSQPGYSPSSTSQYTP 342
SP GYSP+ P YSP+S + Y+P
Sbjct: 1631 SP-----AGYSPTSPQYSPTSPN-YSP 1651
[194][TOP]
>UniRef100_C7YI77 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YI77_NECH7
Length = 1750
Score = 94.0 bits (232), Expect = 8e-18
Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 27/119 (22%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPS---YSPSSPTYSPSSP-------------YNS 450
R++ S +SP+SPS+SPTSP PTSP+ YSPSSP YSP+SP +NS
Sbjct: 1596 RYATSPSFSPSSPSFSPTSPMVRPTSPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNS 1655
Query: 449 GTSPDYSPSSPQFSP-----------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
TSP+YSP+SP +SP S YSP+ P +SP+S Y+P T+ + PG Q
Sbjct: 1656 PTSPNYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSP-TSPYQRSPGAQ 1713
Score = 83.6 bits (205), Expect = 1e-14
Identities = 50/107 (46%), Positives = 63/107 (58%), Gaps = 22/107 (20%)
Frame = -2
Query: 578 FSPSSPY---SPTSPSYSPTSPSYSP----------TSPSYSPSSPT--------YSPSS 462
+SP+SP SPTSP+YSP SP+YSP TSPSYSP+SPT YSP+S
Sbjct: 1645 YSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSPTS 1704
Query: 461 PYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNK 324
PY SP+SP +SP S +SP PG SS +QY+P + N+
Sbjct: 1705 PYQRSPGAQQSPTSPSYSPTSPAFSPRTPG-PGSSGNQYSPNSPSNE 1750
Score = 82.8 bits (203), Expect = 2e-14
Identities = 49/96 (51%), Positives = 61/96 (63%), Gaps = 12/96 (12%)
Frame = -2
Query: 578 FSPSSPYSPTSPS-YSPTSPSYS-------PTSPSYSPSSPTYSPSSPY---NSGTSPDY 432
F P YSPTSP+ YSPTSP TSPS+SPSSP++SP+SP S SP+Y
Sbjct: 1568 FGPGGGYSPTSPNAYSPTSPLVDGGMGGRYATSPSFSPSSPSFSPTSPMVRPTSPASPNY 1627
Query: 431 SPSSPQFSPSTGYSPSQP-GYSPSSTSQYTPKTNDN 327
SPSSP +SP+ SPS P YSP+S +Q+ T+ N
Sbjct: 1628 SPSSPNYSPA---SPSSPRHYSPTSPAQFNSPTSPN 1660
[195][TOP]
>UniRef100_C6F1F6 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F6_PLAVI
Length = 211
Score = 93.6 bits (231), Expect = 1e-17
Identities = 46/70 (65%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393
S YS TSP SPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SPS+
Sbjct: 53 SPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 112
Query: 392 -SPSQPGYSP 366
+PS P YSP
Sbjct: 113 NNPSSPHYSP 122
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -2
Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
+SP+SP +S SP YS TSP SPTSP YSP+SP YSP+SP S TS
Sbjct: 29 YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTS 88
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SP++SP S YSPS P + S+ Y+P
Sbjct: 89 PKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 122
Score = 82.8 bits (203), Expect = 2e-14
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414
++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP P++P +SP YSP +SP+
Sbjct: 76 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 129
Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351
FSP S YS S P Y S ++
Sbjct: 130 FSPTSPAYSISSPVYDQSGNAR 151
Score = 75.9 bits (185), Expect = 2e-12
Identities = 45/99 (45%), Positives = 54/99 (54%), Gaps = 21/99 (21%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 450
SS + T YSPTSP+ YS TSP SP+SP YSP+SP S
Sbjct: 19 SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKXSPTSPKYSPTSPKYS 78
Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
TSP YSP+SP++SP S YSP+ P YSPSS P +
Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 117
[196][TOP]
>UniRef100_C6F1F5 RNA polymerase II (Fragment) n=1 Tax=Plasmodium fragile
RepID=C6F1F5_PLAFR
Length = 210
Score = 93.6 bits (231), Expect = 1e-17
Identities = 45/70 (64%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393
S YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S TSP YSP+SPQ+SP++
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIP 112
Query: 392 -SPSQPGYSP 366
+PS P YSP
Sbjct: 113 NNPSSPHYSP 122
Score = 92.4 bits (228), Expect = 2e-17
Identities = 49/83 (59%), Positives = 61/83 (73%), Gaps = 6/83 (7%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGTSPDYSP---SSP 417
++SP+SP Y PTSP YSPTSP YSPTSP YSP+SP YSP+SP N+ +SP YSP +SP
Sbjct: 69 KYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSPYAIASP 128
Query: 416 QFSP-STGYSPSQPGYSPSSTSQ 351
+FSP S YS S P Y S+ ++
Sbjct: 129 KFSPTSPAYSISSPVYDRSANAR 151
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -2
Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441
+SP+SP +S SP YS TSP YSPTSP YSP+SP Y P+SP S TS
Sbjct: 29 YSPTSPTNQLGEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTS 88
Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
P YSP+SP++SP S YSP+ P + S+ Y+P
Sbjct: 89 PKYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSP 122
Score = 75.1 bits (183), Expect = 4e-12
Identities = 47/117 (40%), Positives = 57/117 (48%), Gaps = 42/117 (35%)
Frame = -2
Query: 560 YSPTSPS---------------------YSPTSPS--------------------YSPTS 504
YSPTSP+ YSPTSP+ YS TS
Sbjct: 1 YSPTSPTYHLSNNANAGGSAGLNDPKSFYSPTSPTNQLGEMNPNMMKYHSVVSPVYSVTS 60
Query: 503 PSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336
P YSP+SP YSP+SP TSP YSP+SP++SP S YSP+ P YSP+S P +
Sbjct: 61 PKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSS 117
Score = 53.9 bits (128), Expect = 9e-06
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSP------------------SYSPTSPSYSPSSPTYSPSSP 459
++SP+SP YSPTSP YSPTSP +SPTSP+YS SSP Y S+
Sbjct: 90 KYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSPYAIASPKFSPTSPAYSISSPVYDRSA- 148
Query: 458 YNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDD 318
+ + + P SP + SP Q S ++P N D+
Sbjct: 149 --NARNKNQHPLSPAYILQ---SPVQVKQHIQDVSVFSPIQQANADE 190
[197][TOP]
>UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi
RepID=Q8MX30_NAEGR
Length = 1590
Score = 92.4 bits (228), Expect = 2e-17
Identities = 42/59 (71%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SPSSP YSPTSP+YSP+SP+YSPTSP+YSP+SP YSP+SP S TSP+YSP+SP +S
Sbjct: 1532 YSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSPNYSPTSPAYS 1590
Score = 87.0 bits (214), Expect = 9e-16
Identities = 45/75 (60%), Positives = 55/75 (73%), Gaps = 6/75 (8%)
Frame = -2
Query: 575 SPSSP-----YSPTSP-SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
SP+SP YSP+SP +YSPTSP+YSP+SP+YSP+SP YSP+SP S TSP YSP+SP
Sbjct: 1522 SPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSP- 1580
Query: 413 FSPSTGYSPSQPGYS 369
YSP+ P YS
Sbjct: 1581 -----NYSPTSPAYS 1590
Score = 85.1 bits (209), Expect = 4e-15
Identities = 47/78 (60%), Positives = 56/78 (71%), Gaps = 5/78 (6%)
Frame = -2
Query: 578 FSPSSPYSPTSPS----YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
FSP + SPTSP YSP+SP +YSPTSP+YSPSSP YSP+SP S TSP+YSP+SP
Sbjct: 1516 FSPVAS-SPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSP- 1573
Query: 413 FSPSTGYSPSQPGYSPSS 360
YSP+ P YSP+S
Sbjct: 1574 -----AYSPTSPNYSPTS 1586
Score = 75.9 bits (185), Expect = 2e-12
Identities = 47/85 (55%), Positives = 56/85 (65%), Gaps = 6/85 (7%)
Frame = -2
Query: 578 FSPSSPYSPTSP-SYSPTSPS----YSPTSP-SYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
FSPS S SP + SPTSP YSP+SP +YSP+SP YSPSSP S TSP YSP+SP
Sbjct: 1507 FSPSPYNSAFSPVASSPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSP 1566
Query: 416 QFSPSTGYSPSQPGYSPSSTSQYTP 342
YSP+ P YSP+S + Y+P
Sbjct: 1567 N------YSPTSPAYSPTSPN-YSP 1584
[198][TOP]
>UniRef100_C6F0A3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A3_PLAFA
Length = 195
Score = 91.3 bits (225), Expect = 5e-17
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--G 396
S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP++
Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA 96
Query: 395 YSPSQPGYSPSS 360
+ + P YSP S
Sbjct: 97 QNIASPNYSPYS 108
Score = 87.8 bits (216), Expect = 6e-16
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y
Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P ++ Y+P
Sbjct: 90 SPTSPVAQNIASPNYSP 106
Score = 82.4 bits (202), Expect = 2e-14
Identities = 46/93 (49%), Positives = 57/93 (61%), Gaps = 20/93 (21%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPS------------------YSPTSPSYSPSSPTYSPSSPY 456
+SP+SP Y+ + YSPTSP YS TSP YSP+SP YSP+SP
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 455 NSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360
S TSP YSP+SP++SP S YSP+ P YSP+S
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 93
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S TSP
Sbjct: 60 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 119
Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330
YS SSP + S + P P Y S Q D
Sbjct: 120 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 158
Score = 76.3 bits (186), Expect = 2e-12
Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 12/85 (14%)
Frame = -2
Query: 560 YSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
YSPTSP+Y+ + YSPTSP Y+ SP YS +SP S TSP YSP+SP+
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S YSP+ P YSP+S +Y+P
Sbjct: 61 YSPTSPKYSPTSPKYSPTS-PKYSP 84
[199][TOP]
>UniRef100_B0DB45 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DB45_LACBS
Length = 1742
Score = 91.3 bits (225), Expect = 5e-17
Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 7/77 (9%)
Frame = -2
Query: 569 SSPY------SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408
+SPY +PTSP+YSPTSP+ + TSP YSP+SP YSP+SP S TSP YSP SP FS
Sbjct: 1586 ASPYYDPSARNPTSPTYSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFS 1645
Query: 407 P-STGYSPSQPGYSPSS 360
P S YSP+ P +SP+S
Sbjct: 1646 PTSPRYSPTSPSFSPAS 1662
Score = 86.3 bits (212), Expect = 2e-15
Identities = 41/61 (67%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP+SP + TSP YSPTSP YSPTSPS+SP+SP YSP SP S TSP YSP+SP FSP+
Sbjct: 1602 YSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPA 1661
Query: 401 T 399
+
Sbjct: 1662 S 1662
Score = 80.5 bits (197), Expect = 9e-14
Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 32/107 (29%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSP----------------------SYSPTSPSYSPSSPT-- 477
+SPSSP YSPTSPS+ P SP + +PTSP+YSP+SP
Sbjct: 1551 YSPSSPNVYSPTSPSFVPQSPFGGATSPFGTSPYAASPYYDPSARNPTSPTYSPTSPALN 1610
Query: 476 -----YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 354
YSP+SP S TSP +SP+SP++SP S +SP+ P YSP+S S
Sbjct: 1611 LTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPS 1657
Score = 74.3 bits (181), Expect = 6e-12
Identities = 36/56 (64%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
+SP+SP YSPTSPS+SPTSP YSP SPS+SP+SP YSP TSP +SP+SP+
Sbjct: 1616 YSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSP-------TSPSFSPASPR 1664
Score = 69.7 bits (169), Expect = 2e-10
Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
R+SP+SP +SPTSP YSP SPS+SPTSP YSP+SP++SP+SP S Y P
Sbjct: 1622 RYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASPRCKFLSIIYEP 1674
[200][TOP]
>UniRef100_A5DCV1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DCV1_PICGU
Length = 224
Score = 91.3 bits (225), Expect = 5e-17
Identities = 47/81 (58%), Positives = 56/81 (69%), Gaps = 7/81 (8%)
Frame = -2
Query: 563 PYSPT---SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
P+ PT SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+
Sbjct: 124 PHHPTHLLSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPNVAQ 183
Query: 392 ----SPSQPGYSPSSTSQYTP 342
P+ Y PS + TP
Sbjct: 184 LLTNFPTVLTYFPSLLTHVTP 204
Score = 73.2 bits (178), Expect = 1e-11
Identities = 33/39 (84%), Positives = 38/39 (97%), Gaps = 1/39 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS 465
+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+
Sbjct: 142 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPN 180
Score = 69.7 bits (169), Expect = 2e-10
Identities = 40/73 (54%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Frame = -2
Query: 551 TSPSYSPT---SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQ 381
T + PT SPSYSPTSPSYSP+SP+YSP TSP YSP+SP YSP+
Sbjct: 121 THQPHHPTHLLSPSYSPTSPSYSPTSPSYSP-------TSPSYSPTSPS------YSPTS 167
Query: 380 PGYSPSSTSQYTP 342
P YSP+S S Y+P
Sbjct: 168 PSYSPTSPS-YSP 179
[201][TOP]
>UniRef100_UPI000151A8B4 hypothetical protein PGUG_01106 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B4
Length = 224
Score = 90.5 bits (223), Expect = 8e-17
Identities = 47/81 (58%), Positives = 55/81 (67%), Gaps = 7/81 (8%)
Frame = -2
Query: 563 PYSPT---SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
P+ PT SPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP+
Sbjct: 124 PHHPTHLLSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPNVAQ 183
Query: 392 ----SPSQPGYSPSSTSQYTP 342
P+ Y PS + TP
Sbjct: 184 LLTNFPTVLTYFPSLLTHVTP 204
Score = 70.9 bits (172), Expect = 7e-11
Identities = 32/39 (82%), Positives = 37/39 (94%), Gaps = 1/39 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS 465
+SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+
Sbjct: 142 YSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPN 180
[202][TOP]
>UniRef100_C6F0B0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0B0_PLAFA
Length = 188
Score = 84.7 bits (208), Expect = 5e-15
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--G 396
+S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP++
Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA 89
Query: 395 YSPSQPGYSPSS 360
+ + P YSP S
Sbjct: 90 QNIASPNYSPYS 101
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438
++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S TSP
Sbjct: 53 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 112
Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330
YS SSP + S + P P Y S Q D
Sbjct: 113 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 151
Score = 77.4 bits (189), Expect = 7e-13
Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 13/86 (15%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSP-----------SYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435
+SP+SP Y+ + YSPTSP Y+ SP YS +SP YSP+SP S TSP
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 434 YSPSSPQFSP-STGYSPSQPGYSPSS 360
YSP+SP++SP S YSP+ P YSP+S
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTS 86
Score = 76.3 bits (186), Expect = 2e-12
Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 12/85 (14%)
Frame = -2
Query: 560 YSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414
YSPTSP+Y+ + YSPTSP Y+ SP YS +SP S TSP YSP+SP+
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342
+SP S YSP+ P YSP+S +Y+P
Sbjct: 61 YSPTSPKYSPTSPKYSPTS-PKYSP 84
[203][TOP]
>UniRef100_A8N128 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
RepID=A8N128_COPC7
Length = 1642
Score = 84.7 bits (208), Expect = 5e-15
Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 5/79 (6%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSP-YNSGTSPDYSPSSPQFS 408
R + S YSPTSP TSP+YSPTSP +SP+SP YSP SP + S SP+YSP+SP +S
Sbjct: 1540 RQATSPTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSPASPSYS 1599
Query: 407 P---STGYSPSQPGYSPSS 360
P S YSPS P +SP+S
Sbjct: 1600 PAPASPNYSPSSPTWSPTS 1618
Score = 79.7 bits (195), Expect = 2e-13
Identities = 47/107 (43%), Positives = 61/107 (57%), Gaps = 17/107 (15%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSP-----SYSP--------SSPTYSPSSPYNSGT 444
+SPSSP YSPTSP P SP +PTSP + SP +SPTYSP+SP T
Sbjct: 1498 YSPSSPNAYSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRRQATSPTYSPTSPIAGLT 1557
Query: 443 SPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
SP YSP+SP FSP++ GYSP P + ++ Y+P + P +
Sbjct: 1558 SPAYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSPASPSYSPAPAS 1604
Score = 70.5 bits (171), Expect = 9e-11
Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 5/70 (7%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSY-SPTSPSYSPTSPSYSPS--SPTYSPSSPYNSGTSPDYSPSSPQ 414
FSP+SP YSP SP++ SP SP+YSP SPSYSP+ SP YSPSSP S TSP + + P
Sbjct: 1568 FSPTSPNGYSPQSPNFGSPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSPAHDQNGPT 1627
Query: 413 FSPSTGYSPS 384
+ S+ Y S
Sbjct: 1628 NNRSSAYQQS 1637
Score = 69.7 bits (169), Expect = 2e-10
Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 19/98 (19%)
Frame = -2
Query: 572 PSSPYSP----TSPSYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNS-------------G 447
P SP+ P YSP+SP+ YSPTSP P SP +P+SP+++
Sbjct: 1483 PQSPHGAGGMSPGPGYSPSSPNAYSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRRQA 1542
Query: 446 TSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQYTPKT 336
TSP YSP+SP S YSP+ PG+SP+S + Y+P++
Sbjct: 1543 TSPTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSPQS 1580
Score = 56.6 bits (135), Expect = 1e-06
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSP-DYSPS 423
SP+SP YSP SPSYSP SP+YSP+SP++SP+SP + + P N+ +S SPS
Sbjct: 1585 SPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSPAHDQNGPTNNRSSAYQQSPS 1639
[204][TOP]
>UniRef100_Q9FI54 Genomic DNA, chromosome 5, TAC clone:K3K7 n=1 Tax=Arabidopsis
thaliana RepID=Q9FI54_ARATH
Length = 314
Score = 83.6 bits (205), Expect = 1e-14
Identities = 48/104 (46%), Positives = 54/104 (51%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYS 390
S YSPTSPSYSPTSPSY P S S SP S +YSP SP +S SP YSP+S SP
Sbjct: 110 SPTYSPTSPSYSPTSPSYRPNSSSDSPDSHSYSPVSPDHSLVSPQYSPTSTHHSPILSSP 169
Query: 389 PSQPGYSPSSTSQYTPKTNDNKDDPGTQ*ARLICLRDGSDCADG 258
P GY P KT+ K+ + DGS DG
Sbjct: 170 PEDYGYGPDDIEAGKMKTDQLKE-----------IGDGSSHVDG 202
[205][TOP]
>UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii
RepID=B9PMD7_TOXGO
Length = 1892
Score = 80.1 bits (196), Expect = 1e-13
Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 10/88 (11%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSG---TSPDYSPSSPQFS 408
+P+SP SP SP+YSPTSP YSPTSP YSP+ YSP SP Y +G SP ++ SP++S
Sbjct: 1750 NPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYS 1809
Query: 407 PST--GYSPSQP----GYSPSSTSQYTP 342
PS+ YSP+ P SPS + P
Sbjct: 1810 PSSPAAYSPTSPMPNVAGSPSYEDSHAP 1837
Score = 73.2 bits (178), Expect = 1e-11
Identities = 44/91 (48%), Positives = 53/91 (58%), Gaps = 13/91 (14%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSP--SYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSS 420
+P SP+ S SYSPTSP +PTSP+ YSP+SP YSP+SP S T YSP S
Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQS 1787
Query: 419 PQFSPSTG-YSPS----QPGYSPSSTSQYTP 342
P + G SPS P YSPSS + Y+P
Sbjct: 1788 PSYGAGQGPLSPSFTVQSPRYSPSSPAAYSP 1818
Score = 68.6 bits (166), Expect = 3e-10
Identities = 50/112 (44%), Positives = 59/112 (52%), Gaps = 37/112 (33%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTS-----------------------PSYSPTSP------SYS 492
+SPSSP YSPTSP+YSPTS PS +P SP SYS
Sbjct: 1682 YSPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPMSPHFSASTSYS 1741
Query: 491 PSSPTY-----SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 354
P+SP SP+SPY SP YSP+SP++SP S YSP+ YSP S S
Sbjct: 1742 PTSPVQQSNPTSPTSPY----SPAYSPTSPRYSPTSPMYSPTFAPYSPQSPS 1789
Score = 68.2 bits (165), Expect = 5e-10
Identities = 43/90 (47%), Positives = 52/90 (57%), Gaps = 15/90 (16%)
Frame = -2
Query: 566 SPYSPT-SPSYSPTSP-SYSPTSPSYSPSSPTY-------------SPSSPYNSGTSPDY 432
SP SPT SPSYSP+SP SYSPTSP+YSP+S +P SP+ SP
Sbjct: 1672 SPTSPTLSPSYSPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPF----SPSN 1727
Query: 431 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
+P SP FS ST YSP+ P + TS +P
Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSP 1757
Score = 67.4 bits (163), Expect = 8e-10
Identities = 46/103 (44%), Positives = 60/103 (58%), Gaps = 24/103 (23%)
Frame = -2
Query: 578 FSPSSP-----YSPTSP-SYSPTSPSYSPTSP----------------SYSPSSPTYSPS 465
+SP+SP YSP+SP SYSPTSP+YSPTS SP SP+ +P
Sbjct: 1671 YSPTSPTLSPSYSPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPM 1730
Query: 464 SPYNSGTSPDYSPSSP--QFSPSTGYSPSQPGYSPSSTSQYTP 342
SP+ S S YSP+SP Q +P++ SP P YSP+S +Y+P
Sbjct: 1731 SPHFS-ASTSYSPTSPVQQSNPTSPTSPYSPAYSPTS-PRYSP 1771
Score = 60.1 bits (144), Expect = 1e-07
Identities = 41/108 (37%), Positives = 50/108 (46%), Gaps = 35/108 (32%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSP----SYSPSSPTYSPSSPYNS------------- 450
FSP +P SP SPS P +SPTSP + SSP+YSPSSP ++
Sbjct: 1595 FSPRNPLSPLSPS-GPPGGVFSPTSPILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDM 1653
Query: 449 ------------GTSPDYSPSSPQFSPS------TGYSPSQPGYSPSS 360
G YSP+SP SPS YSP+ P YSP+S
Sbjct: 1654 VISPGGVGSDGRGRGGSYSPTSPTLSPSYSPSSPPSYSPTSPAYSPTS 1701
[206][TOP]
>UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KEC6_TOXGO
Length = 1892
Score = 80.1 bits (196), Expect = 1e-13
Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 10/88 (11%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSG---TSPDYSPSSPQFS 408
+P+SP SP SP+YSPTSP YSPTSP YSP+ YSP SP Y +G SP ++ SP++S
Sbjct: 1750 NPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYS 1809
Query: 407 PST--GYSPSQP----GYSPSSTSQYTP 342
PS+ YSP+ P SPS + P
Sbjct: 1810 PSSPAAYSPTSPMPNVAGSPSYEDSHAP 1837
Score = 73.2 bits (178), Expect = 1e-11
Identities = 44/91 (48%), Positives = 53/91 (58%), Gaps = 13/91 (14%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSP--SYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSS 420
+P SP+ S SYSPTSP +PTSP+ YSP+SP YSP+SP S T YSP S
Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQS 1787
Query: 419 PQFSPSTG-YSPS----QPGYSPSSTSQYTP 342
P + G SPS P YSPSS + Y+P
Sbjct: 1788 PSYGAGQGPLSPSFTVQSPRYSPSSPAAYSP 1818
Score = 67.4 bits (163), Expect = 8e-10
Identities = 49/112 (43%), Positives = 59/112 (52%), Gaps = 37/112 (33%)
Frame = -2
Query: 578 FSPSSP--YSPTSPSYSPTS-----------------------PSYSPTSP------SYS 492
+SPS+P YSPTSP+YSPTS PS +P SP SYS
Sbjct: 1682 YSPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPMSPHFSASTSYS 1741
Query: 491 PSSPTY-----SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 354
P+SP SP+SPY SP YSP+SP++SP S YSP+ YSP S S
Sbjct: 1742 PTSPVQQSNPTSPTSPY----SPAYSPTSPRYSPTSPMYSPTFAPYSPQSPS 1789
Score = 67.0 bits (162), Expect = 1e-09
Identities = 42/90 (46%), Positives = 52/90 (57%), Gaps = 15/90 (16%)
Frame = -2
Query: 566 SPYSPT-SPSYSPTSP-SYSPTSPSYSPSSPTY-------------SPSSPYNSGTSPDY 432
SP SPT SPSYSP++P SYSPTSP+YSP+S +P SP+ SP
Sbjct: 1672 SPTSPTLSPSYSPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPF----SPSN 1727
Query: 431 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
+P SP FS ST YSP+ P + TS +P
Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSP 1757
Score = 66.2 bits (160), Expect = 2e-09
Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 24/103 (23%)
Frame = -2
Query: 578 FSPSSP-----YSPTSP-SYSPTSPSYSPTSP----------------SYSPSSPTYSPS 465
+SP+SP YSP++P SYSPTSP+YSPTS SP SP+ +P
Sbjct: 1671 YSPTSPTLSPSYSPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPM 1730
Query: 464 SPYNSGTSPDYSPSSP--QFSPSTGYSPSQPGYSPSSTSQYTP 342
SP+ S S YSP+SP Q +P++ SP P YSP+S +Y+P
Sbjct: 1731 SPHFS-ASTSYSPTSPVQQSNPTSPTSPYSPAYSPTS-PRYSP 1771
Score = 60.1 bits (144), Expect = 1e-07
Identities = 41/108 (37%), Positives = 50/108 (46%), Gaps = 35/108 (32%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSP----SYSPSSPTYSPSSPYNS------------- 450
FSP +P SP SPS P +SPTSP + SSP+YSPSSP ++
Sbjct: 1595 FSPRNPLSPLSPS-GPPGGVFSPTSPILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDM 1653
Query: 449 ------------GTSPDYSPSSPQFSPS------TGYSPSQPGYSPSS 360
G YSP+SP SPS YSP+ P YSP+S
Sbjct: 1654 VISPGGVGSDGRGRGGSYSPTSPTLSPSYSPSAPPSYSPTSPAYSPTS 1701
[207][TOP]
>UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma
polyspora DSM 70294 RepID=A7TTU2_VANPO
Length = 1311
Score = 80.1 bits (196), Expect = 1e-13
Identities = 39/68 (57%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Frame = -2
Query: 575 SPSSPY--SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
SPSSP +SP +SPTSP+YSPTSPSYSP+SP+YSP+S S TS YSP+SP +S +
Sbjct: 1211 SPSSPGFGGVSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSTSYSQTSSSYSPTSPSYSQN 1270
Query: 401 TGYSPSQP 378
++P P
Sbjct: 1271 LHHTPKIP 1278
Score = 56.2 bits (134), Expect = 2e-06
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Frame = -2
Query: 575 SPSSPY--SPTSPSYSP-TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS- 408
SP + Y SP+SP + +SP +SPTSP YSP+SP S TSP YSP+S +S
Sbjct: 1203 SPFTAYGESPSSPGFGGVSSPGFSPTSP-------AYSPTSPSYSPTSPSYSPTSTSYSQ 1255
Query: 407 PSTGYSPSQPGYSPSSTSQYTPK 339
S+ YSP+ P Y S +TPK
Sbjct: 1256 TSSSYSPTSPSY--SQNLHHTPK 1276
[208][TOP]
>UniRef100_UPI0000F3065A UPI0000F3065A related cluster n=1 Tax=Bos taurus
RepID=UPI0000F3065A
Length = 540
Score = 78.2 bits (191), Expect = 4e-13
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F P SP + P SP + P SP + SP + P SP ++P SP + SPD+ P SP++ P
Sbjct: 65 FGPQSPEFEPQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSPRYEPQ 124
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S GY P PGY P S T +P
Sbjct: 125 SPGYEPKSPGYEPRSPGYGTQSPEYEPQNP 154
Score = 57.8 bits (138), Expect = 6e-07
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 15/81 (18%)
Frame = -2
Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399
P SP + P SP + P SP + P SP SP + P SP+F+P S
Sbjct: 60 PQSPGFGPQSPEFEPQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSP 119
Query: 398 GYSPSQPGYSPSSTSQYTPKT 336
Y P PGY P S Y P++
Sbjct: 120 RYEPQSPGYEPKSPG-YEPRS 139
Score = 57.0 bits (136), Expect = 1e-06
Identities = 26/75 (34%), Positives = 36/75 (48%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
PS ++P SP SP + P SP Y P SP Y P SP SP Y SP++ P
Sbjct: 96 PSPEFAPRSPESDSQSPDFEPQSPRYEPQSPGYEPKSPGYEPRSPGYGTQSPEYEPQNPE 155
Query: 392 SPSQPGYSPSSTSQY 348
+Q + +S++
Sbjct: 156 FKTQSPEFEAESSKF 170
Score = 56.6 bits (135), Expect = 1e-06
Identities = 24/55 (43%), Positives = 29/55 (52%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
S S + P SP Y P SP Y P SP Y P SP Y SP +P++ SP+F
Sbjct: 109 SQSPDFEPQSPRYEPQSPGYEPKSPGYEPRSPGYGTQSPEYEPQNPEFKTQSPEF 163
[209][TOP]
>UniRef100_UPI00004C0623 PREDICTED: similar to zinc finger protein 239 (predicted) isoform 1
n=1 Tax=Canis lupus familiaris RepID=UPI00004C0623
Length = 554
Score = 74.7 bits (182), Expect = 5e-12
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F P SP + SP + P SP + SP + P SP ++P SP + SP++ P SP++ P
Sbjct: 65 FEPQSPGFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQ 124
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S GY P PGY P S Y PK+
Sbjct: 125 SPGYEPRSPGYEPKSPG-YEPKS 146
Score = 70.9 bits (172), Expect = 7e-11
Identities = 38/95 (40%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Frame = -2
Query: 581 RFSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426
RF P SP + P SP ++P SP SP + P SP Y P SP SP Y P
Sbjct: 78 RFEPESPGFESRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEP 137
Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNK 324
SP + P S GY P PGY S + Y P+ + K
Sbjct: 138 KSPGYEPKSPGYEPRSPGYE-SQSPGYEPQNPEFK 171
Score = 63.5 bits (153), Expect = 1e-08
Identities = 31/72 (43%), Positives = 33/72 (45%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
S S + P SP Y P SP Y P SP Y P SP Y P SP SP Y SP G
Sbjct: 109 SQSPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSP------G 162
Query: 395 YSPSQPGYSPSS 360
Y P P + S
Sbjct: 163 YEPQNPEFKTQS 174
Score = 61.6 bits (148), Expect = 4e-08
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
R+ P SP Y P SP Y P SP Y P SP Y P SP Y SP +P++ SP+F
Sbjct: 120 RYEPQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSPGYEPQNPEFKTQSPEF 177
Score = 56.2 bits (134), Expect = 2e-06
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
+ P SP Y P SP Y P SP Y P SP Y SP Y P +P SP++ S +F
Sbjct: 128 YEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSPGYEPQNPEFKTQSPEFEAQSSKF 184
[210][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
uvarioides RepID=Q9AXN1_9FLOR
Length = 1712
Score = 74.7 bits (182), Expect = 5e-12
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 19/95 (20%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSP--------------SYSPTSPSY-SPSSPTYSPSSPYNSGTS 441
SP + YSPTSP+++PTSP +YSPT PSY + +SP Y Y+ G+
Sbjct: 1598 SPGAQYSPTSPAFTPTSPGYSSATGPGRPGTGAYSPTGPSYNAAASPGYQSGINYSPGSP 1657
Query: 440 PDYSPSSPQFSPST----GYSPSQPGYSPSSTSQY 348
YSP+SP F+P + GYSPS P Y+P ++ Y
Sbjct: 1658 HTYSPNSPVFTPRSPAAHGYSPSTPQYNPQGSNPY 1692
[211][TOP]
>UniRef100_A9SW33 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SW33_PHYPA
Length = 284
Score = 74.3 bits (181), Expect = 6e-12
Identities = 42/77 (54%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS-------SPQF 411
S PYSP+ SP SP+YSP+ SP SPTYSPS Y S SP YSPS SP +
Sbjct: 158 SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTY 217
Query: 410 SPSTGY-SPSQPGYSPS 363
SPS Y SP P YSPS
Sbjct: 218 SPSPVYKSPPSPSYSPS 234
Score = 68.6 bits (166), Expect = 3e-10
Identities = 42/84 (50%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS-------SPQF 411
S PY+ SP Y SP YSP+ SP SPTYSPS Y S SP YSPS SP +
Sbjct: 146 SPPYASPSPVYE--SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTY 203
Query: 410 SPSTGY-SPSQPGYSPSSTSQYTP 342
SPS Y SP P YSPS + P
Sbjct: 204 SPSPVYKSPPSPTYSPSPVYKSPP 227
Score = 62.4 bits (150), Expect = 2e-08
Identities = 41/85 (48%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS-------SPQ 414
PS P P SP Y SP Y+ SP Y SP YSPS Y S SP YSPS SP
Sbjct: 133 PSCPPPPESPVYE--SPPYASPSPVYE--SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPT 188
Query: 413 FSPSTGY-SPSQPGYSPSSTSQYTP 342
+SPS Y SP P YSPS + P
Sbjct: 189 YSPSPVYKSPPSPTYSPSPVYKSPP 213
Score = 60.8 bits (146), Expect = 7e-08
Identities = 34/60 (56%), Positives = 38/60 (63%), Gaps = 8/60 (13%)
Frame = -2
Query: 578 FSPSSPY-SPTSPSYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGTSPDYSPS 423
+SPS Y SP SP+YSP+ SP SP+YSPS SPTYSPS Y S SP YSPS
Sbjct: 175 YSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPSYSPS 234
[212][TOP]
>UniRef100_Q4UCP5 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UCP5_THEAN
Length = 1678
Score = 74.3 bits (181), Expect = 6e-12
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 17/97 (17%)
Frame = -2
Query: 575 SPSSPYSPTS-------PSYSPTSP--------SYSPTSPSYSPSSPTYSPSSPYN--SG 447
SP+SP SPTS P+YSPTSP + SPTSP YSP+ YSP+SP + S
Sbjct: 1556 SPTSPMSPTSAISPVYSPAYSPTSPMSPTSPTSALSPTSPVYSPA---YSPTSPTSAMSP 1612
Query: 446 TSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKT 336
TSP YSP+ SP+ GY+P+ P YSP+ Y+P T
Sbjct: 1613 TSPVYSPAYSPTSPNLGYAPTSPVYSPA----YSPTT 1645
Score = 73.6 bits (179), Expect = 1e-11
Identities = 46/89 (51%), Positives = 60/89 (67%), Gaps = 10/89 (11%)
Frame = -2
Query: 578 FSPSSPYSPTSP--SYSPT----SPSYSPTSP--SYSPSSPTYSPSSPYNSGTSPD--YS 429
+SP+SP SPTSP + SPT SP+YSPTSP + SP+SP YSP+ S TSP+ Y+
Sbjct: 1575 YSPTSPMSPTSPTSALSPTSPVYSPAYSPTSPTSAMSPTSPVYSPA---YSPTSPNLGYA 1631
Query: 428 PSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
P+SP +SP+ YSP+ P Y S TS +P
Sbjct: 1632 PTSPVYSPA--YSPTTPNYGYSPTSPLSP 1658
Score = 67.0 bits (162), Expect = 1e-09
Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 11/96 (11%)
Frame = -2
Query: 575 SPSSP-----YSPTSPS--YSPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPS 423
SP+SP YSPTSP+ SPTSP Y SP+YSP+SP Y+P+SP SP YSP+
Sbjct: 1591 SPTSPVYSPAYSPTSPTSAMSPTSPVY---SPAYSPTSPNLGYAPTSPV---YSPAYSPT 1644
Query: 422 SPQ--FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKD 321
+P +SP++ SP+ P YSP T ++P ++ D
Sbjct: 1645 TPNYGYSPTSPLSPTSPAYSP--TDPFSPNPFEDID 1678
Score = 55.8 bits (133), Expect = 2e-06
Identities = 42/81 (51%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD--YSPSSPQFSPS 402
SP+SP SPTSP SPTSP SPTS SP YSP+SP S TSP SP+SP +SP+
Sbjct: 1544 SPTSPMSPTSPM-SPTSPM-SPTSAISPVYSPAYSPTSPM-SPTSPTSALSPTSPVYSPA 1600
Query: 401 TGYSPSQPGYSPSS-TSQYTP 342
YSP+S TS +P
Sbjct: 1601 ---------YSPTSPTSAMSP 1612
[213][TOP]
>UniRef100_UPI0001792AA2 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum
RepID=UPI0001792AA2
Length = 649
Score = 72.8 bits (177), Expect = 2e-11
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+ SSP Y +SPSY +SPSY +SPSY SS +Y SSP G+SP Y SSP + S
Sbjct: 460 YGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSS 519
Query: 401 TGYSPSQPGYSPSSTSQYTP 342
+ Y+ + P YS SS+S +P
Sbjct: 520 SLYAGNSPSYSGSSSSYGSP 539
Score = 65.9 bits (159), Expect = 2e-09
Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GY 393
SS Y +SPSY +SPSY +SPSY SSP+Y +SP G+S Y SSP + S+ Y
Sbjct: 380 SSSYGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSY 439
Query: 392 SPSQPGYSPSSTS 354
S P Y SS S
Sbjct: 440 GGSSPSYGGSSHS 452
Score = 65.5 bits (158), Expect = 3e-09
Identities = 35/73 (47%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPSTGY 393
S Y +SPSY +S SY +SPSY SSP+Y SSP G+SP Y SSP + S+ Y
Sbjct: 436 SHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSY 495
Query: 392 SPSQPGYSPSSTS 354
S P Y SS S
Sbjct: 496 GGSSPSYGGSSPS 508
Score = 63.2 bits (152), Expect = 1e-08
Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GY 393
SS Y +S SY +S SY +SPSY SSP+Y SSP G+SP Y +SP + S+ Y
Sbjct: 366 SSSYGGSSSSYGGSSSSYGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSY 425
Query: 392 SPSQPGYSPSSTS 354
S P Y SS S
Sbjct: 426 GGSSPSYGGSSHS 438
Score = 62.4 bits (150), Expect = 2e-08
Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GY 393
S Y +SPSY +S SY +SPSY SS +Y SSP G+SP Y SSP + S+ Y
Sbjct: 422 SHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSY 481
Query: 392 SPSQPGYSPSSTS 354
S P Y SS+S
Sbjct: 482 GGSSPSYGGSSSS 494
Score = 61.2 bits (147), Expect = 6e-08
Identities = 37/79 (46%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+ SSP Y +S SY +SPSY +SPSY SSP+Y SS Y +G SP YS SS +
Sbjct: 481 YGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSSSLY-AGNSPSYSGSSSSYGSP 539
Query: 401 TGYSPSQPGYSP-SSTSQY 348
+ Y PS SP S+S Y
Sbjct: 540 SPYKPSYGSPSPYKSSSSY 558
Score = 60.8 bits (146), Expect = 7e-08
Identities = 37/82 (45%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF---SP 405
S S Y +SPSY +SPSY +SPSY +SP+Y SS G+SP Y SS + SP
Sbjct: 385 SSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSP 444
Query: 404 STG-----YSPSQPGYSPSSTS 354
S G Y S P Y SS S
Sbjct: 445 SYGGSSHSYGGSSPSYGGSSPS 466
Score = 58.9 bits (141), Expect = 3e-07
Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--- 399
S Y +S SY +SPSY +S SY SSP+Y SS G+SP Y SSP + S+
Sbjct: 415 SPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSY 474
Query: 398 -GYSPSQPGYSPS---STSQY 348
G SPS G SPS S+S Y
Sbjct: 475 GGSSPSYGGSSPSYGGSSSSY 495
Score = 58.2 bits (139), Expect = 5e-07
Identities = 38/77 (49%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411
+ SSP Y SPSY +S SY +SPSY SS +Y SSP G+S Y SSP +
Sbjct: 404 YGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGS 463
Query: 410 SPS-TGYSPSQPGYSPS 363
SPS G SPS G SPS
Sbjct: 464 SPSYGGSSPSYGGSSPS 480
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/71 (47%), Positives = 40/71 (56%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP YS +SPS+ S SY +S SY SS +Y SSP G+SP Y SSP + G
Sbjct: 351 SPPQKYS-SSPSFGGGSSSYGGSSSSYGGSSSSYGSSSPSYGGSSPSYGGSSPSYG---G 406
Query: 395 YSPSQPGYSPS 363
SPS G SPS
Sbjct: 407 SSPSYGGNSPS 417
Score = 55.8 bits (133), Expect = 2e-06
Identities = 38/94 (40%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSS---PYNSGTSPDYSPSSP 417
+ SS Y+ SPSYS +S SY SP PSY SP S SS PY+S SPSS
Sbjct: 516 YGSSSLYAGNSPSYSGSSSSYGSPSPYKPSYGSPSPYKSSSSYKAPYSSSGPSFESPSSY 575
Query: 416 QFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
+ SP +G S + SP S Y ++ K P
Sbjct: 576 KLSPYSGGSSYEGSSSPYKYSSYEGSSSSYKSSP 609
[214][TOP]
>UniRef100_UPI0000E241DC PREDICTED: hypothetical protein n=1 Tax=Pan troglodytes
RepID=UPI0000E241DC
Length = 1156
Score = 72.0 bits (175), Expect = 3e-11
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P
Sbjct: 674 FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 733
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S GY P PGY P S Y P++
Sbjct: 734 SPGYEPRSPGYEPRSPG-YEPRS 755
Score = 65.1 bits (157), Expect = 4e-09
Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
RF P SP + SP P SP ++P SP SP + SP SP Y P SP + P
Sbjct: 687 RFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEP 746
Query: 404 -STGYSPSQPGYSPSSTSQYTPKTNDNK 324
S GY P PGY S +S+Y + + K
Sbjct: 747 RSPGYEPRSPGYE-SESSRYESQNTELK 773
Score = 55.8 bits (133), Expect = 2e-06
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Frame = -2
Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399
P SP + P SP + P SP + P SP SP P SP+F+P S
Sbjct: 669 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 728
Query: 398 GYSPSQPGYSPSSTSQYTPKT 336
Y P PGY P S Y P++
Sbjct: 729 RYEPQSPGYEPRSPG-YEPRS 748
[215][TOP]
>UniRef100_Q01K81 H0525C06.3 protein n=2 Tax=Oryza sativa RepID=Q01K81_ORYSA
Length = 350
Score = 72.0 bits (175), Expect = 3e-11
Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 15/95 (15%)
Frame = -2
Query: 575 SPSSPYSPT----SPSYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGTSPDYS 429
+PS P+SP+ SP YSP++P SP YSPS SP Y+PS+P+ SPDY+
Sbjct: 162 APSPPWSPSRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYA 221
Query: 428 PSSPQFSP----STGYSPSQPGYSPSSTSQYTPKT 336
PS+P P S YSPS P +S + YTP T
Sbjct: 222 PSTPWSPPRRASSPDYSPSTPPRRAASPN-YTPST 255
Score = 64.7 bits (156), Expect = 5e-09
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 12/83 (14%)
Frame = -2
Query: 578 FSPSSPYSP----TSPSYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGTSPDY 432
++PS+P+SP +SP YSP++P SP+Y+PS SP YSPSSP SP+Y
Sbjct: 220 YAPSTPWSPPRRASSPDYSPSTPPRRAASPNYTPSTPPRRAASPDYSPSSPPRRAASPEY 279
Query: 431 SP-SSPQFSPSTGYSPSQPGYSP 366
+ S P+ + S Y+PS P SP
Sbjct: 280 TQLSPPRRAASPDYNPSTPPPSP 302
Score = 63.5 bits (153), Expect = 1e-08
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 19/92 (20%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN---SGTSPDY 432
+SPS+P YSP++P SP Y+P++P +SP Y+PS+P++ +SPDY
Sbjct: 178 YSPSTPPRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYAPSTPWSPPRRASSPDY 237
Query: 431 SPSS-PQFSPSTGYSPS-------QPGYSPSS 360
SPS+ P+ + S Y+PS P YSPSS
Sbjct: 238 SPSTPPRRAASPNYTPSTPPRRAASPDYSPSS 269
Score = 61.2 bits (147), Expect = 6e-08
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432
++PS+P Y+P++P P +SP YSP++P +SP Y+PS+P SPDY
Sbjct: 206 YTPSTPWRRAASPDYAPSTPWSPPRRASSPDYSPSTPPRRAASPNYTPSTPPRRAASPDY 265
Query: 431 SPSSPQFSPSTGYSPSQPGYSP---SSTSQYTPKT 336
SPSSP P SP SP +++ Y P T
Sbjct: 266 SPSSP---PRRAASPEYTQLSPPRRAASPDYNPST 297
Score = 60.8 bits (146), Expect = 7e-08
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 16/106 (15%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSP---SSPTYSPSSPYNSGTSPDY 432
+SPS+P Y+P++P SP Y+P++P P SSP YSPS+P SP+Y
Sbjct: 192 YSPSTPPRRAASPDYTPSTPWRRAASPDYAPSTPWSPPRRASSPDYSPSTPPRRAASPNY 251
Query: 431 SPSS-PQFSPSTGYSPSQP---GYSPSSTSQYTPKTNDNKD-DPGT 309
+PS+ P+ + S YSPS P SP T P+ + D +P T
Sbjct: 252 TPSTPPRRAASPDYSPSSPPRRAASPEYTQLSPPRRAASPDYNPST 297
Score = 58.2 bits (139), Expect = 5e-07
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 17/90 (18%)
Frame = -2
Query: 554 PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS----------SPQFSP 405
P P + SP Y+P++P +SP Y+PS+P+ SPD++PS SP +SP
Sbjct: 121 PPPPPRTAASPEYTPSTPWRRAASPDYTPSTPWRRAASPDHAPSPPWSPSRRAASPDYSP 180
Query: 404 ST-GYSPSQPGYSPS------STSQYTPKT 336
ST + P YSPS ++ YTP T
Sbjct: 181 STPPRRAASPDYSPSTPPRRAASPDYTPST 210
[216][TOP]
>UniRef100_Q4N0F9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N0F9_THEPA
Length = 1681
Score = 72.0 bits (175), Expect = 3e-11
Identities = 44/88 (50%), Positives = 54/88 (61%), Gaps = 17/88 (19%)
Frame = -2
Query: 575 SPSSPYSPTS-------PSYSPTSP--------SYSPTSPSYSPSSPTYSPSSPYN--SG 447
SP SP SPTS P+YSPTSP + SPTSP YSP+ YSP+SP + S
Sbjct: 1559 SPMSPMSPTSAMSPVYSPAYSPTSPMSPTSPANALSPTSPVYSPA---YSPTSPTSAMSP 1615
Query: 446 TSPDYSPSSPQFSPSTGYSPSQPGYSPS 363
TSP YSP+ SP+ GY+P+ P YSP+
Sbjct: 1616 TSPVYSPAYSPTSPNLGYAPTSPVYSPA 1643
Score = 71.2 bits (173), Expect = 5e-11
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 20/99 (20%)
Frame = -2
Query: 578 FSPSSPYSPTSPS--YSPTSP----SYSPTSPS--YSPSSPTYSPS----------SPYN 453
+SP+SP SPTSP+ SPTSP +YSPTSP+ SP+SP YSP+ +P +
Sbjct: 1578 YSPTSPMSPTSPANALSPTSPVYSPAYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTS 1637
Query: 452 SGTSPDYSPSSPQF--SPSTGYSPSQPGYSPSSTSQYTP 342
SP YSP+SP + SP++ SP+ P YSP T ++P
Sbjct: 1638 PVYSPAYSPTSPNYGYSPTSPLSPTSPAYSP--TDPFSP 1674
Score = 67.4 bits (163), Expect = 8e-10
Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 13/85 (15%)
Frame = -2
Query: 578 FSPSSPYSPTSPS--YSPTSP--SYSPT-------SPSYSPSSPTYSPSSPYN--SGTSP 438
FSP+SP SP SP+ SPTSP SPT SP+YSP+SP SP+SP N S TSP
Sbjct: 1540 FSPTSPTSPMSPTSPMSPTSPMSPMSPTSAMSPVYSPAYSPTSP-MSPTSPANALSPTSP 1598
Query: 437 DYSPSSPQFSPSTGYSPSQPGYSPS 363
YSP+ SP++ SP+ P YSP+
Sbjct: 1599 VYSPAYSPTSPTSAMSPTSPVYSPA 1623
Score = 60.5 bits (145), Expect = 9e-08
Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 9/67 (13%)
Frame = -2
Query: 575 SPSSP-----YSPTSPS--YSPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPS 423
SP+SP YSPTSP+ Y+PTSP Y SP+YSP+SP YSP+SP S TSP YSP+
Sbjct: 1614 SPTSPVYSPAYSPTSPNLGYAPTSPVY---SPAYSPTSPNYGYSPTSPL-SPTSPAYSPT 1669
Query: 422 SPQFSPS 402
P FSP+
Sbjct: 1670 DP-FSPN 1675
Score = 55.5 bits (132), Expect = 3e-06
Identities = 43/82 (52%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--SPSTGY 393
SP SPTSP SPTSP SPTSP SP SPT + S Y SP YSP+SP SP+
Sbjct: 1541 SPTSPTSPM-SPTSPM-SPTSPM-SPMSPTSAMSPVY----SPAYSPTSPMSPTSPANAL 1593
Query: 392 SPSQP----GYSPSS-TSQYTP 342
SP+ P YSP+S TS +P
Sbjct: 1594 SPTSPVYSPAYSPTSPTSAMSP 1615
[217][TOP]
>UniRef100_B7Z2Y7 cDNA FLJ59521, moderately similar to Zinc finger and SCAN
domain-containing protein 2 n=1 Tax=Homo sapiens
RepID=B7Z2Y7_HUMAN
Length = 453
Score = 70.9 bits (172), Expect = 7e-11
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P
Sbjct: 34 FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 93
Query: 404 STGYSPSQPGYSPSS 360
S GY P PGY P S
Sbjct: 94 SPGYEPRSPGYEPRS 108
Score = 55.8 bits (133), Expect = 2e-06
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Frame = -2
Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399
P SP + P SP + P SP + P SP SP P SP+F+P S
Sbjct: 29 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 88
Query: 398 GYSPSQPGYSPSSTSQYTPKT 336
Y P PGY P S Y P++
Sbjct: 89 RYEPQSPGYEPRSPG-YEPRS 108
[218][TOP]
>UniRef100_B2RD90 cDNA, FLJ96507 n=1 Tax=Homo sapiens RepID=B2RD90_HUMAN
Length = 520
Score = 70.9 bits (172), Expect = 7e-11
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P
Sbjct: 45 FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 104
Query: 404 STGYSPSQPGYSPSS 360
S GY P PGY P S
Sbjct: 105 SPGYEPRSPGYEPRS 119
Score = 55.8 bits (133), Expect = 2e-06
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Frame = -2
Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399
P SP + P SP + P SP + P SP SP P SP+F+P S
Sbjct: 40 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 99
Query: 398 GYSPSQPGYSPSSTSQYTPKT 336
Y P PGY P S Y P++
Sbjct: 100 RYEPQSPGYEPRSPG-YEPRS 119
[219][TOP]
>UniRef100_Q9H5H4 Zinc finger protein 768 n=1 Tax=Homo sapiens RepID=ZN768_HUMAN
Length = 540
Score = 70.9 bits (172), Expect = 7e-11
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P
Sbjct: 65 FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 124
Query: 404 STGYSPSQPGYSPSS 360
S GY P PGY P S
Sbjct: 125 SPGYEPRSPGYEPRS 139
Score = 55.8 bits (133), Expect = 2e-06
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Frame = -2
Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399
P SP + P SP + P SP + P SP SP P SP+F+P S
Sbjct: 60 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 119
Query: 398 GYSPSQPGYSPSSTSQYTPKT 336
Y P PGY P S Y P++
Sbjct: 120 RYEPQSPGYEPRSPG-YEPRS 139
[220][TOP]
>UniRef100_UPI00005878B7 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI00005878B7
Length = 374
Score = 70.1 bits (170), Expect = 1e-10
Identities = 30/76 (39%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -2
Query: 560 YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 384
Y+ T+PSY+ ++PSY+ ++PSY+ S P+Y+ S PY + T+ Y+ S+P ++ ST Y+ +
Sbjct: 148 YTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTSTTSSYTASTPSYTESTASYTTT 207
Query: 383 QPGYSPSSTSQYTPKT 336
QP +P +T +P+T
Sbjct: 208 QPSAAPPTTMTSSPRT 223
Score = 65.5 bits (158), Expect = 3e-09
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GY 393
+S Y+ ++PSY+ + PSY+ + PSY+ S+P+Y S+PY T+P Y+ ++P ++ ST Y
Sbjct: 103 TSSYTASTPSYTESRPSYATSRPSYTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSY 162
Query: 392 SPSQPGYSPSSTSQYTPK 339
+ S P Y+ S S T +
Sbjct: 163 ATSTPSYATSRPSYATSR 180
Score = 65.1 bits (157), Expect = 4e-09
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = -2
Query: 563 PYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYS 390
PY TS P Y+ ++PSY ++P Y+ S+P+Y S+PY + + P Y+ S+P ++ ST Y+
Sbjct: 20 PYYTTSRPPYTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYT 79
Query: 389 PSQPGYSPSSTSQYTPKT 336
S+P Y P+ST YT T
Sbjct: 80 ESRPSY-PTSTPYYTTST 96
Score = 63.9 bits (154), Expect = 9e-09
Identities = 29/74 (39%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = -2
Query: 563 PYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSP 387
PY+ ++PSY+ ++PSY+ + PSY S+P Y+ S+PY + T+ Y+ S+P ++ S Y+
Sbjct: 63 PYTTSTPSYTASTPSYTESRPSYPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYAT 122
Query: 386 SQPGYSPSSTSQYT 345
S+P Y+ S+ S T
Sbjct: 123 SRPSYTTSTPSYPT 136
Score = 63.2 bits (152), Expect = 1e-08
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Frame = -2
Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
++ S+P PTS P Y T+P Y+ T+PSY+ S+P+Y+ S+P + + P Y+ S P F+ +
Sbjct: 127 YTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTST 186
Query: 401 T-GYSPSQPGYSPSSTSQYT 345
T Y+ S P Y+ ST+ YT
Sbjct: 187 TSSYTASTPSYT-ESTASYT 205
Score = 61.6 bits (148), Expect = 4e-08
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = -2
Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
++ S+P PTS P Y+ ++PSY ++P Y+ S P Y+ S+P + ++P Y+ S P + S
Sbjct: 29 YTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPTS 88
Query: 401 TGYSPSQPGYSPSSTSQYTPKT 336
T Y + Y +TS YT T
Sbjct: 89 TPYYTTSTPYYTLTTSSYTAST 110
Score = 60.1 bits (144), Expect = 1e-07
Identities = 27/77 (35%), Positives = 47/77 (61%)
Frame = -2
Query: 563 PYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPS 384
PY+ ++PSY ++P Y+ ++PSY S+P Y+ S P + ++P Y+ S+P ++ S P+
Sbjct: 28 PYTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPT 87
Query: 383 QPGYSPSSTSQYTPKTN 333
Y +ST YT T+
Sbjct: 88 STPYYTTSTPYYTLTTS 104
Score = 58.9 bits (141), Expect = 3e-07
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = -2
Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
++ S P PTS P Y+ ++P Y+ T+ SY+ S+P+Y+ S P + + P Y+ S+P + S
Sbjct: 78 YTESRPSYPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYATSRPSYTTSTPSYPTS 137
Query: 401 TGYSPSQPGYSPSSTSQYTPKT 336
T Y + Y S+T YT T
Sbjct: 138 TPYYRTTTPYYTSTTPSYTAST 159
Score = 57.0 bits (136), Expect = 1e-06
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
++ S P Y+ ++PSY ++P Y T+P Y+ ++P+Y+ S+P + ++P Y+ S P ++ S
Sbjct: 120 YATSRPSYTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYATS 179
Query: 401 TGYSPSQPGYSPSSTSQYTPKT 336
Y S +ST YT T
Sbjct: 180 RPYFTSTTSSYTASTPSYTEST 201
Score = 56.6 bits (135), Expect = 1e-06
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Frame = -2
Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+ S+PY TS PSY ++P Y+ + P Y+ S+P+Y+ S+P + + P Y S+P ++ S
Sbjct: 36 YPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPTSTPYYTTS 95
Query: 401 T--------GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
T Y+ S P Y+ S S T + + P
Sbjct: 96 TPYYTLTTSSYTASTPSYTESRPSYATSRPSYTTSTP 132
Score = 56.6 bits (135), Expect = 1e-06
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 29/110 (26%)
Frame = -2
Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPS--------------------- 465
+ S+PY TS P Y+ T+ SY+ ++PSY+ S P+Y+ S
Sbjct: 85 YPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYATSRPSYTTSTPSYPTSTPYYRTT 144
Query: 464 SPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYS------PSSTSQYTPKT 336
+PY + T+P Y+ S+P ++ ST Y+ S+P Y+ S+TS YT T
Sbjct: 145 TPYYTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTSTTSSYTAST 194
Score = 54.3 bits (129), Expect = 7e-06
Identities = 28/83 (33%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
++ S+P Y+ ++PSY+ + PSY ++P Y+ S+P Y+ ++ + ++P Y+ S P ++ S
Sbjct: 64 YTTSTPSYTASTPSYTESRPSYPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYATS 123
Query: 401 -TGYSPSQPGYSPSSTSQYTPKT 336
Y+ S P Y P+ST Y T
Sbjct: 124 RPSYTTSTPSY-PTSTPYYRTTT 145
[221][TOP]
>UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4RMP1_MAGGR
Length = 1757
Score = 70.1 bits (170), Expect = 1e-10
Identities = 50/108 (46%), Positives = 64/108 (59%), Gaps = 17/108 (15%)
Frame = -2
Query: 578 FSPSSP------YSPTSPSY---SPTSPSYSPTSPSYSP---SSPTYSPSSP-YNSGTSP 438
+ P SP YSPTSP+ SPTSP YSP SPS+SP +SP Y SP + S TSP
Sbjct: 1640 YQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSP 1699
Query: 437 D--YSPSSPQFSPSTGY-SPSQPG-YSPSSTSQYTPKTNDNKDDPGTQ 306
+ YSP+SP F S SP+ PG YSP+S S ++P++ + G Q
Sbjct: 1700 NAHYSPTSPSFQRSPAQASPTSPGPYSPTSPS-FSPRSPGRNNRSGGQ 1746
Score = 69.3 bits (168), Expect = 2e-10
Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 33/107 (30%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSP--SYSPT------------SPSYSPSSPTYSPSSP---YNSG 447
SP+SP+S SYSPTSP YSPT SPS+SPSSP++ P+SP + +G
Sbjct: 1569 SPTSPFSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSFSPSSPSFQPTSPIMRHGAG 1628
Query: 446 TSPDYSPSSPQFSPST----------------GYSPSQPGYSPSSTS 354
S YSP+SP + P + G SP+ P YSP+S S
Sbjct: 1629 DSMGYSPTSPTYQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPS 1675
Score = 63.5 bits (153), Expect = 1e-08
Identities = 50/110 (45%), Positives = 56/110 (50%), Gaps = 26/110 (23%)
Frame = -2
Query: 566 SPY-SPTSPSYSPTSP-SYSPTSP------SYSPSSPT--YSPSSPYNSG-----TSPDY 432
+PY S TSP PTSP S SPTSP SYSP+SP YSP+SP G +SP +
Sbjct: 1552 NPYGSGTSPR--PTSPFSTSPTSPFSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSF 1609
Query: 431 SPSSPQFSP-----------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SPSSP F P S GYSP+ P Y P S P DN P
Sbjct: 1610 SPSSPSFQPTSPIMRHGAGDSMGYSPTSPTYQPGS-----PTGGDNHYSP 1654
Score = 62.8 bits (151), Expect = 2e-08
Identities = 43/94 (45%), Positives = 53/94 (56%), Gaps = 26/94 (27%)
Frame = -2
Query: 575 SPSSP-YSPTSPSYSP---TSPSY--------SPTSPS--YSPSSPTYSPSSPYNSGTSP 438
SP+SP YSP SPS+SP TSP Y SPTSP+ YSP+SP++ S S TSP
Sbjct: 1663 SPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSPNAHYSPTSPSFQRSPAQASPTSP 1722
Query: 437 D-YSPSSPQFSPST-----------GYSPSQPGY 372
YSP+SP FSP + YSP+ P +
Sbjct: 1723 GPYSPTSPSFSPRSPGRNNRSGGQDSYSPTSPSH 1756
[222][TOP]
>UniRef100_B9G524 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9G524_ORYSJ
Length = 536
Score = 68.6 bits (166), Expect = 3e-10
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = -2
Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-T 399
PS P P+ PSY P+ PSY P+ P Y+P P Y+P P + P+YSP P + PS
Sbjct: 330 PSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPP 389
Query: 398 GYSPSQPGYSPSSTSQYTPK 339
Y+P P Y P S +Y P+
Sbjct: 390 QYAPQPPSYVP-SPPEYAPE 408
Score = 67.4 bits (163), Expect = 8e-10
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+ PS P Y+P P Y+P P P+ P YSP P+Y PS P + P Y PS P+++P
Sbjct: 349 YEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPE 408
Query: 401 TG-YSPSQPGYSPSSTSQYTPK 339
Y+P PG +P S +Y P+
Sbjct: 409 PPVYAPYPPGITP-SPPEYAPE 429
Score = 66.2 bits (160), Expect = 2e-09
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYS 390
+PY P+ P P+ PSY P+ PSY PS P Y+P P + P PS P++SP Y
Sbjct: 327 TPY-PSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYV 385
Query: 389 PSQPGYSPSSTSQYTPKTNDNKDDP 315
PS P Y+P S Y P + +P
Sbjct: 386 PSPPQYAPQPPS-YVPSPPEYAPEP 409
Score = 62.4 bits (150), Expect = 2e-08
Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = -2
Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
PS P YSP PSY P+ P Y+P PSY PS P Y+P P + P +PS P+++P
Sbjct: 372 PSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEP- 430
Query: 395 YSPSQPG 375
P PG
Sbjct: 431 -PPGPPG 436
Score = 57.8 bits (138), Expect = 6e-07
Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = -2
Query: 572 PSSP-YSPTSPSYSP--TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
PS P +P+ P +P + P P+ PSY PS P+Y PS P + P Y+P P PS
Sbjct: 314 PSPPEVTPSPPEITPYPSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPS 373
Query: 401 -TGYSPSQPGYSPSSTSQYTPK 339
YSP P Y P S QY P+
Sbjct: 374 PPEYSPEPPSYVP-SPPQYAPQ 394
Score = 57.8 bits (138), Expect = 6e-07
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+SP P Y P+ P Y+P PSY P+ P Y+P P Y+P P + + P+Y+P P P
Sbjct: 377 YSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEPPPGPPG 436
Query: 401 TGYSPSQPGYSPSS 360
+ G P++
Sbjct: 437 RWWRVPAAGGVPAA 450
[223][TOP]
>UniRef100_B4MT78 GK20106 n=1 Tax=Drosophila willistoni RepID=B4MT78_DROWI
Length = 175
Score = 68.6 bits (166), Expect = 3e-10
Identities = 36/80 (45%), Positives = 56/80 (70%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
+P+SP +PT+P SPT+P+ PTSP+ P+SPT +P++P S TSP +P++P SP+T
Sbjct: 25 TPTSPTTPTTPPTSPTTPTTPPTSPTTPPTSPT-TPTTPPTSPTSPT-TPTTPPTSPTT- 81
Query: 395 YSPSQPGYSPSSTSQYTPKT 336
P+ P SP++ ++ TP T
Sbjct: 82 --PTTPPTSPTTPAETTPTT 99
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSPST 399
P+SP +PT+P SPT+P SPT+P+ P+SPT +P++P S T+P P+
Sbjct: 36 PTSPTTPTTPPTSPTTPPTSPTTPTTPPTSPTSPTTPTTPPTSPTTPTTPPT-------- 87
Query: 398 GYSPSQPGYSPSSTSQYTPKTN 333
SP+ P + +T+Q TPK +
Sbjct: 88 --SPTTPAETTPTTTQATPKAS 107
[224][TOP]
>UniRef100_P13983 Extensin n=1 Tax=Nicotiana tabacum RepID=EXTN_TOBAC
Length = 620
Score = 68.2 bits (165), Expect = 5e-10
Identities = 41/87 (47%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPS--YSPTSPSYSPS-----SPTYSPSSPYNSGTSPDYSPSSPQ 414
PS YSP P+YSP PS YSP P+YSPS +PT+SP P S P YSP P
Sbjct: 278 PSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTPTPTFSPPPPAYS-PPPTYSPPPPT 336
Query: 413 FSP---STGYSPSQPGYSPSSTSQYTP 342
+ P S YSP P YSP Y+P
Sbjct: 337 YLPLPSSPIYSPPPPVYSPPPPPSYSP 363
Score = 65.5 bits (158), Expect = 3e-09
Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Frame = -2
Query: 572 PSSPYSPT-SPSYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
P+ SP SP+YSP P+YSP PS YSP P YSPS P +P +SP P +SP
Sbjct: 270 PAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPP--PTPTPTFSPPPPAYSPP 327
Query: 401 TGYSPSQPGYSPSSTSQ-YTP 342
YSP P Y P +S Y+P
Sbjct: 328 PTYSPPPPTYLPLPSSPIYSP 348
Score = 63.2 bits (152), Expect = 1e-08
Identities = 38/91 (41%), Positives = 45/91 (49%), Gaps = 16/91 (17%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYS---PSSPTYSPSSP-YNSGTSPDYSPSSPQFS--- 408
SP P P+YSP P+YSP P+Y+ P PTYSP P Y+ P YSP P +S
Sbjct: 400 SPPLPAPPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPP 459
Query: 407 --------PSTGYSPSQPGYSPSSTSQ-YTP 342
P YSP P YSP S Y+P
Sbjct: 460 PAYAQPPPPPPTYSPPPPAYSPPPPSPIYSP 490
Score = 61.2 bits (147), Expect = 6e-08
Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS--P 405
+SPS P +PT P++SP P+YSP P+YSP PTY P +SP YSP P +S P
Sbjct: 305 YSPSPPPTPT-PTFSPPPPAYSP-PPTYSPPPPTYLPLP-----SSPIYSPPPPVYSPPP 357
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
YSP P Y P P + + P
Sbjct: 358 PPSYSPPPPTYLPPPPPSSPPPPSFSPPPP 387
Score = 60.1 bits (144), Expect = 1e-07
Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Frame = -2
Query: 554 PTSPSYSPTSPSYSPTSPSYSPS---SPTYSPSSPYNS--GTSPDYSPSSPQFSPS---- 402
P SP P P+YSP P+Y+ S SPTYSP P S SP YSP P +SPS
Sbjct: 253 PPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPT 312
Query: 401 --TGYSPSQPGYSPSSTSQYTPKT 336
+SP P YSP T P T
Sbjct: 313 PTPTFSPPPPAYSPPPTYSPPPPT 336
Score = 58.9 bits (141), Expect = 3e-07
Identities = 41/105 (39%), Positives = 46/105 (43%), Gaps = 26/105 (24%)
Frame = -2
Query: 578 FSPSSP-YSPTSP-SYSPTSPSY-------SPTSPSYSPSSPTYSPSSPYNSGTS----- 441
+SP P YSP P SYSP P+Y SP PS+SP PTY S P S
Sbjct: 346 YSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPA 405
Query: 440 -PDYSPSSPQFSP-----------STGYSPSQPGYSPSSTSQYTP 342
P YSP P +SP YSP P YSP Y+P
Sbjct: 406 PPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSP 450
Score = 58.5 bits (140), Expect = 4e-07
Identities = 36/91 (39%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSP--SSPTYSPSSP-YNSGTSPDYSPSSPQF-- 411
+P+ +SP P+YSP P+YSP P+Y P SSP YSP P Y+ P YSP P +
Sbjct: 312 TPTPTFSPPPPAYSPP-PTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLP 370
Query: 410 ------SPSTGYSPSQPGY--SPSSTSQYTP 342
P +SP P Y SP Y+P
Sbjct: 371 PPPPSSPPPPSFSPPPPTYEQSPPPPPAYSP 401
Score = 58.5 bits (140), Expect = 4e-07
Identities = 36/88 (40%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Frame = -2
Query: 578 FSPSSPY----SPTSPSYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
FSP P P P+YSP P+YSP P+YSP PTY+ P P YSP
Sbjct: 382 FSPPPPTYEQSPPPPPAYSPPLPAPPTYSPPPPTYSPPPPTYAQPPP----LPPTYSPPP 437
Query: 419 PQFS--PSTGYSPSQPGYSPSSTSQYTP 342
P +S P YSP P YSP + P
Sbjct: 438 PAYSPPPPPTYSPPPPTYSPPPPAYAQP 465
Score = 56.2 bits (134), Expect = 2e-06
Identities = 35/82 (42%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Frame = -2
Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSP-SYSPSSPTYSPSSPYNS---GTSPDYSPS 423
+SP P P P+YSP P+YSP P +YSP PTYSP P + P YSP
Sbjct: 416 YSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPP 475
Query: 422 SPQFS---PSTGYSPSQPGYSP 366
P +S PS YSP P P
Sbjct: 476 PPAYSPPPPSPIYSPPPPQVQP 497
Score = 55.8 bits (133), Expect = 2e-06
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---SPDYSPSSPQFSP- 405
P+ ++P P++ P+ + P SP P PTYSP P + + SP YSP P +SP
Sbjct: 235 PTHRHAP--PTHQPSPLRHLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPP 292
Query: 404 --STGYSPSQPGYSPSSTSQYTP 342
S YSP P YSPS TP
Sbjct: 293 PPSPIYSPPPPAYSPSPPPTPTP 315
Score = 54.7 bits (130), Expect = 5e-06
Identities = 35/75 (46%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Frame = -2
Query: 578 FSPSSP-YSPTSP-SYSPTSPSYSPTSPSYS---PSSPTYSPSSPYNS--GTSPDYSPSS 420
+SP P YSP P +YSP P+YSP P+Y+ P PTYSP P S SP YSP
Sbjct: 433 YSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPIYSPPP 492
Query: 419 PQFSP-STGYSPSQP 378
PQ P +SP P
Sbjct: 493 PQVQPLPPTFSPPPP 507
Score = 54.7 bits (130), Expect = 5e-06
Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 20/96 (20%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYS---PTSPSYSPTSPSYSPS--SPTYSPSSPYNSGTSPDYSPSSP 417
+SP P YSP P+Y+ P P+YSP P+YSP SP YSP P P +SP P
Sbjct: 448 YSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPIYSPPPPQVQPLPPTFSPPPP 507
Query: 416 QF--------------SPSTGYSPSQPGYSPSSTSQ 351
+ +P+ G PS P +SP Q
Sbjct: 508 RRIHLPPPPHRQPRPPTPTYGQPPSPPTFSPPPPRQ 543
[225][TOP]
>UniRef100_UPI0001796FA8 PREDICTED: zinc finger protein 768 n=1 Tax=Equus caballus
RepID=UPI0001796FA8
Length = 547
Score = 67.8 bits (164), Expect = 6e-10
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F P +P + SP + P SP + SP + P SP ++P S + SP++ P SP++ P
Sbjct: 65 FEPQNPEFESQSPRFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSPRYEPQ 124
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S GY P PGY S +S+Y K+
Sbjct: 125 SPGYEPKSPGYE-SQSSRYESKS 146
Score = 55.1 bits (131), Expect = 4e-06
Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -2
Query: 578 FSPSSPYSPT-SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
F+P S S + SP + P SP Y P SP Y P SP Y S SP Y P +P F P
Sbjct: 100 FAPRSSESDSQSPEFEPQSPRYEPQSPGYEPKSPGYESQSSRYESKSPGYEPQNPVFEPQ 159
Query: 401 TGYSPSQPGYSPSSTSQ 351
+P SP +Q
Sbjct: 160 ---NPEFKTQSPEFEAQ 173
Score = 54.3 bits (129), Expect = 7e-06
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 15/89 (16%)
Frame = -2
Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399
P SP + P +P + SP + P SP SP + P SP+F+P S
Sbjct: 60 PQSPGFEPQNPEFESQSPRFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSP 119
Query: 398 GYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
Y P PGY P S + + PG
Sbjct: 120 RYEPQSPGYEPKSPGYESQSSRYESKSPG 148
Score = 53.9 bits (128), Expect = 9e-06
Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 15/89 (16%)
Frame = -2
Query: 581 RFSPSSP--------YSPTSPSYSPTS-------PSYSPTSPSYSPSSPTYSPSSPYNSG 447
RF P SP + P SP ++P S P + P SP Y P SP Y P SP
Sbjct: 78 RFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSPRYEPQSPGYEPKSPGYES 137
Query: 446 TSPDYSPSSPQFSPSTGYSPSQPGYSPSS 360
S Y SP GY P P + P +
Sbjct: 138 QSSRYESKSP------GYEPQNPVFEPQN 160
[226][TOP]
>UniRef100_Q3JTV6 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei
1710b RepID=Q3JTV6_BURP1
Length = 364
Score = 67.8 bits (164), Expect = 6e-10
Identities = 49/90 (54%), Positives = 61/90 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 252 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 304
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
SP+ P S TS +P +D D G Q
Sbjct: 305 TSPTSPTSPTSPTSPTSPGRSDQYDRRGRQ 334
Score = 65.9 bits (159), Expect = 2e-09
Identities = 47/88 (53%), Positives = 60/88 (68%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 243 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 295
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
SP+ P S TS +P + + PG
Sbjct: 296 TSPTSPTSPTSPTSPTSPTSPTSPTSPG 323
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 183 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 235
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 236 TSPTSPTSPTSPTSPTSPTSPTSPTSP 262
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 186 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 238
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 239 TSPTSPTSPTSPTSPTSPTSPTSPTSP 265
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 189 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 241
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 242 TSPTSPTSPTSPTSPTSPTSPTSPTSP 268
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 192 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 244
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 245 TSPTSPTSPTSPTSPTSPTSPTSPTSP 271
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 195 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 247
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 248 TSPTSPTSPTSPTSPTSPTSPTSPTSP 274
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 198 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 250
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 251 TSPTSPTSPTSPTSPTSPTSPTSPTSP 277
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 201 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 253
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 254 TSPTSPTSPTSPTSPTSPTSPTSPTSP 280
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 204 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 256
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 257 TSPTSPTSPTSPTSPTSPTSPTSPTSP 283
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 213 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 265
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 266 TSPTSPTSPTSPTSPTSPTSPTSPTSP 292
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 216 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 268
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 269 TSPTSPTSPTSPTSPTSPTSPTSPTSP 295
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 219 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 271
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 272 TSPTSPTSPTSPTSPTSPTSPTSPTSP 298
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 222 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 274
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 275 TSPTSPTSPTSPTSPTSPTSPTSPTSP 301
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 225 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 277
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 278 TSPTSPTSPTSPTSPTSPTSPTSPTSP 304
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 228 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 280
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 281 TSPTSPTSPTSPTSPTSPTSPTSPTSP 307
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 231 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 283
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 284 TSPTSPTSPTSPTSPTSPTSPTSPTSP 310
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 234 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 286
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 287 TSPTSPTSPTSPTSPTSPTSPTSPTSP 313
Score = 60.8 bits (146), Expect = 7e-08
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
P SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 181 PVSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 233
Query: 392 SPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 234 SPTSPTSPTSPTSPTSPTSPTSPTSP 259
Score = 60.1 bits (144), Expect = 1e-07
Identities = 45/89 (50%), Positives = 57/89 (64%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
R P P SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP+
Sbjct: 175 RRRPRRPVSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPT 227
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
+ SP+ P S TS +P + + P
Sbjct: 228 SPTSPTSPTSPTSPTSPTSPTSPTSPTSP 256
[227][TOP]
>UniRef100_B1HHT1 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei
S13 RepID=B1HHT1_BURPS
Length = 282
Score = 67.8 bits (164), Expect = 6e-10
Identities = 49/90 (54%), Positives = 61/90 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 170 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 222
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
SP+ P S TS +P +D D G Q
Sbjct: 223 TSPTSPTSPTSPTSPTSPGRSDQYDRRGRQ 252
Score = 65.1 bits (157), Expect = 4e-09
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN--SGTSPDYSPSSPQFSPS 402
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP + S TSP SP+SP SP+
Sbjct: 158 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSPTSPTSPTSPT-SPTSPT-SPT 211
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
+ SP+ P S TS +P + + PG
Sbjct: 212 SPTSPTSPTSPTSPTSPTSPTSPTSPTSPG 241
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 128 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 180
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 181 TSPTSPTSPTSPTSPTSPTSPTSPTSP 207
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 131 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 183
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 184 TSPTSPTSPTSPTSPTSPTSPTSPTSP 210
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 134 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 186
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 187 TSPTSPTSPTSPTSPTSPTSPTSPTSP 213
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 137 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 189
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 190 TSPTSPTSPTSPTSPTSPTSPTSPTSP 216
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 140 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 192
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 193 TSPTSPTSPTSPTSPTSPTSPTSPTSP 219
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 143 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 195
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 196 TSPTSPTSPTSPTSPTSPTSPTSPTSP 222
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 146 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 198
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 199 TSPTSPTSPTSPTSPTSPTSPTSPTSP 225
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 149 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 201
Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 202 TSPTSPTSPTSPTSPTSPTSPTSPTSP 228
Score = 60.8 bits (146), Expect = 7e-08
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
P SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++
Sbjct: 126 PVSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 178
Query: 392 SPSQPGYSPSSTSQYTPKTNDNKDDP 315
SP+ P S TS +P + + P
Sbjct: 179 SPTSPTSPTSPTSPTSPTSPTSPTSP 204
Score = 60.1 bits (144), Expect = 1e-07
Identities = 45/89 (50%), Positives = 57/89 (64%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
R P P SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP+
Sbjct: 120 RRRPRRPVSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPT 172
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
+ SP+ P S TS +P + + P
Sbjct: 173 SPTSPTSPTSPTSPTSPTSPTSPTSPTSP 201
[228][TOP]
>UniRef100_Q7XRB2 OSJNBa0006B20.10 protein n=3 Tax=Oryza sativa RepID=Q7XRB2_ORYSJ
Length = 335
Score = 67.8 bits (164), Expect = 6e-10
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ---F 411
R + S YSP SP SP Y+P SPS +SP Y+P SP SPDY+P+SP
Sbjct: 113 RRAASPDYSPESPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAA 172
Query: 410 SPSTGYSPSQPGYSPSSTSQYTPKT 336
+ S Y+P P +++ Y+P T
Sbjct: 173 ASSPDYTPESPPRRRAASPDYSPST 197
Score = 65.9 bits (159), Expect = 2e-09
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP----- 417
R + S YSP++P SP YSP++P +SP YSPS+P SPDY+P SP
Sbjct: 186 RRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAA 245
Query: 416 -----QFSP-----STGYSPSQPGYSPSSTSQYTPKT 336
Q +P S Y+PS P +++ YTP T
Sbjct: 246 SPDYTQMTPPRRAASPDYTPSTPPPPRAASPDYTPST 282
Score = 65.5 bits (158), Expect = 3e-09
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS-PQFSP 405
R + S Y+P SP SP YSP SP +SP Y+P SP SPDYSP S P+ +
Sbjct: 71 RRAASPDYTPESPPRRAASPDYSPASPPRRAASPDYTPESPPRRAASPDYSPESPPRRAA 130
Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336
S Y+P+ P +S YTP++
Sbjct: 131 SPDYTPASPSRRAAS-PDYTPES 152
Score = 65.1 bits (157), Expect = 4e-09
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 16/98 (16%)
Frame = -2
Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-QFSP 405
R + S YSP SP SP Y+P SP +SP YSP SP SPDY+P+SP + +
Sbjct: 85 RRAASPDYSPASPPRRAASPDYTPESPPRRAASPDYSPESPPRRAASPDYTPASPSRRAA 144
Query: 404 STGYSP-------SQPGYSPSSTSQ--------YTPKT 336
S Y+P + P Y+P+S S+ YTP++
Sbjct: 145 SPDYTPESPPRRAASPDYTPASPSRRAAASSPDYTPES 182
Score = 62.0 bits (149), Expect = 3e-08
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSP--------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420
SPS + +SP Y+P SP YSP++P +SP YSPS+P SPDYSPS+
Sbjct: 166 SPSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPST 225
Query: 419 -PQFSPSTGYSPSQP---GYSPSSTSQYTPKTNDNKD 321
P+ + S Y+P P SP T P+ + D
Sbjct: 226 PPRRAASPDYTPMSPPRRAASPDYTQMTPPRRAASPD 262
Score = 60.5 bits (145), Expect = 9e-08
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 25/106 (23%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSP-------SSPTYSPSSPYN--SGTSPDYS 429
+SP SP SP Y+P SPS SP Y+P +SP Y+P+SP + +SPDY+
Sbjct: 120 YSPESPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAAASSPDYT 179
Query: 428 PSSP--QFSPSTGYSPS-------QPGYSPS------STSQYTPKT 336
P SP + + S YSPS P YSPS ++ Y+P T
Sbjct: 180 PESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPST 225
Score = 57.8 bits (138), Expect = 6e-07
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 16/94 (17%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
+SPS+P YSP++P SP Y+P SP +SP Y+ +P SPDY+PS
Sbjct: 207 YSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDYTQMTPPRRAASPDYTPS 266
Query: 422 --------SPQFSPSTGYSPSQPGYSPSSTSQYT 345
SP ++PST PS P PS+ +T
Sbjct: 267 TPPPPRAASPDYTPST--PPSSP--LPSAAESFT 296
[229][TOP]
>UniRef100_Q7RJS0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RJS0_PLAYO
Length = 2312
Score = 67.8 bits (164), Expect = 6e-10
Identities = 48/101 (47%), Positives = 55/101 (54%), Gaps = 32/101 (31%)
Frame = -2
Query: 578 FSPSSPYSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSP 480
+SPS YSPTSP+ YSPTSP YS TSP YSP+SP
Sbjct: 2148 YSPS--YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSP 2205
Query: 479 TYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372
YSPSSP N+ +SP YSP +SP+FSP S YS S P Y
Sbjct: 2206 QYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 2246
Score = 66.2 bits (160), Expect = 2e-09
Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S TSP YS SSP + +
Sbjct: 2190 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN 2249
Query: 401 ---TGYSPSQPGYSPSSTSQ 351
G +P P Y S Q
Sbjct: 2250 ENMAGKNPLSPAYMLQSRVQ 2269
Score = 63.9 bits (154), Expect = 9e-09
Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 15/78 (19%)
Frame = -2
Query: 548 SPSYSPTSPSYSPTSPS-YSPSSP------------TYSPSSPYNSGTSPDYSPSSPQFS 408
SPSYSPTSP+Y+ + + YSP+SP Y+ SP S TSP YSP+SPQ+S
Sbjct: 2149 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYS 2208
Query: 407 PSTGY--SPSQPGYSPSS 360
PS+ +PS P YSP S
Sbjct: 2209 PSSPVPNNPSSPQYSPYS 2226
[230][TOP]
>UniRef100_B8BEN2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BEN2_ORYSI
Length = 519
Score = 67.4 bits (163), Expect = 8e-10
Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = -2
Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-T 399
PS P P+ PSY P+ PSY P+ P Y+P P Y+P P + P+YSP P + PS
Sbjct: 293 PSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPP 352
Query: 398 GYSPSQPGYSPS 363
Y+P P Y PS
Sbjct: 353 QYAPQPPSYVPS 364
Score = 65.9 bits (159), Expect = 2e-09
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
+ PS P Y P+ P Y+P P Y+P P PS P YSP P + P Y+P P + PS
Sbjct: 305 YEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPS 364
Query: 401 TG-YSPSQPGYSPSSTSQYTPK 339
Y+P PG +P S +Y P+
Sbjct: 365 PPVYAPYPPGITP-SPPEYAPE 385
Score = 64.7 bits (156), Expect = 5e-09
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = -2
Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYS 390
+PY P+ P P+ PSY P+ PSY PS P Y+P P + P PS P++SP Y
Sbjct: 290 TPY-PSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYV 348
Query: 389 PSQPGYSPSSTSQYTP 342
PS P Y+P S Y P
Sbjct: 349 PSPPQYAPQPPS-YVP 363
Score = 60.5 bits (145), Expect = 9e-08
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
++P P Y+P P P+ P YSP PSY PS P Y+P P + P Y+P P +PS
Sbjct: 319 YAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPVYAPYPPGITPS 378
Query: 401 -TGYSPSQPGYSPSSTSQYTP 342
Y+P P P Y P
Sbjct: 379 PPEYAPEPPPGPPGGGGGYLP 399
Score = 57.8 bits (138), Expect = 6e-07
Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = -2
Query: 572 PSSP-YSPTSPSYSP--TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402
PS P +P+ P +P + P P+ PSY PS P+Y PS P + P Y+P P PS
Sbjct: 277 PSPPEVTPSPPEITPYPSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPS 336
Query: 401 -TGYSPSQPGYSPSSTSQYTPK 339
YSP P Y P S QY P+
Sbjct: 337 PPEYSPEPPSYVP-SPPQYAPQ 357
[231][TOP]
>UniRef100_Q4Y307 Putative uncharacterized protein n=1 Tax=Plasmodium chabaudi
RepID=Q4Y307_PLACH
Length = 133
Score = 67.4 bits (163), Expect = 8e-10
Identities = 42/80 (52%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S TSP YS SSP + S
Sbjct: 11 SXVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 70
Query: 401 ---TGYSPSQPGYSPSSTSQ 351
G +P P Y S Q
Sbjct: 71 ENMAGKNPLSPAYMLQSRVQ 90
Score = 61.6 bits (148), Expect = 4e-08
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = -2
Query: 560 YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 384
Y+ S YS TSP YSPTSP YSPSSP P++P + SP YS +SP+FSP S YS S
Sbjct: 7 YNIMSXVYSVTSPKYSPTSPQYSPSSPV--PNNPSSPQYSP-YSITSPKFSPTSPAYSIS 63
Query: 383 QPGYSPS 363
P Y S
Sbjct: 64 SPVYDKS 70
[232][TOP]
>UniRef100_C6F1F7 DNA-directed RNA polymerase n=1 Tax=Plasmodium gallinaceum
RepID=C6F1F7_PLAGA
Length = 2200
Score = 67.4 bits (163), Expect = 8e-10
Identities = 49/109 (44%), Positives = 56/109 (51%), Gaps = 30/109 (27%)
Frame = -2
Query: 578 FSPSSPYSPTSPS-------YSPTSPS------------------YSPTSPSYSPSSPTY 474
+SPS YSPTSPS YSPTSP YS TSP YSP SP Y
Sbjct: 2039 YSPS--YSPTSPSYNADNVYYSPTSPKNQMDDVKSNIKYNVMSPVYSVTSPKYSPMSPQY 2096
Query: 473 SPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342
SP+SP N+ SP YSP +SP+FSP S YS S P Y ++ P
Sbjct: 2097 SPTSPVANNPGSPHYSPYSITSPKFSPTSPAYSISSPVYDKNAVLNNQP 2145
[233][TOP]
>UniRef100_C6F098 RNA polymerase II (Fragment) n=2 Tax=Plasmodium vinckei
RepID=C6F098_PLAVN
Length = 161
Score = 67.4 bits (163), Expect = 8e-10
Identities = 42/80 (52%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S TSP YS SSP + S
Sbjct: 39 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 98
Query: 401 ---TGYSPSQPGYSPSSTSQ 351
G +P P Y S Q
Sbjct: 99 ENMAGKNPLSPAYMLQSRVQ 118
Score = 67.0 bits (162), Expect = 1e-09
Identities = 46/98 (46%), Positives = 52/98 (53%), Gaps = 32/98 (32%)
Frame = -2
Query: 560 YSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 462
YSPTSP+ YSPTSP YS TSP YSP+SP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQAGDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 461 PY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGYSPS 363
P N+ +SP YSP +SP+FSP S YS S P Y S
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 98
[234][TOP]
>UniRef100_UPI0000D9F0D9 PREDICTED: similar to zinc finger protein 239 (predicted) n=1
Tax=Macaca mulatta RepID=UPI0000D9F0D9
Length = 650
Score = 67.0 bits (162), Expect = 1e-09
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
F P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P
Sbjct: 182 FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 241
Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNK 324
S GY P P Y S +S+Y + + K
Sbjct: 242 SPGYEPRSPSYE-SESSRYESQNPELK 267
Score = 63.5 bits (153), Expect = 1e-08
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = -2
Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPST 399
P SP + P SP + P SP + P SP + SP P SP + SP+ SP+F S S
Sbjct: 177 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 236
Query: 398 GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
Y P PGY P S S + + +P
Sbjct: 237 RYEPQSPGYEPRSPSYESESSRYESQNP 264
[235][TOP]
>UniRef100_Q1WKU0 Putative RNA polymerase II 215 kD subunit (Fragment) n=2
Tax=melanogaster subgroup RepID=Q1WKU0_DROYA
Length = 766
Score = 67.0 bits (162), Expect = 1e-09
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-Y 393
SSP SP PS SP P+ SPSYSP+SP Y+ SSP G SP+YSPSSP +SP++ Y
Sbjct: 698 SSPSSP-GPSMSPYFPASPSVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLY 754
Query: 392 SPSQPGYSPSS 360
+ + P Y+ ++
Sbjct: 755 ASASPRYASTT 765
Score = 65.5 bits (158), Expect = 3e-09
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 660 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 719
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360
YSP+SP ++ S+ YSPS P YSP+S
Sbjct: 720 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 751
Score = 63.2 bits (152), Expect = 1e-08
Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 6/59 (10%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSP 417
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P
Sbjct: 708 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTP 766
[236][TOP]
>UniRef100_C5Y8R4 Putative uncharacterized protein Sb06g017200 n=1 Tax=Sorghum
bicolor RepID=C5Y8R4_SORBI
Length = 367
Score = 66.6 bits (161), Expect = 1e-09
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 20/101 (19%)
Frame = -2
Query: 578 FSPSSP-YSPTSPS--------YSPTSPSYSPT---------SPSYSPSSPTYSPSSPYN 453
+SP++P Y+P +PS YSP SP Y+P SP YSP+SP Y+P +P +
Sbjct: 133 YSPATPEYTPLTPSSQRSGSPVYSPASPEYTPLLTPSSRRFGSPDYSPASPEYTPLTPSS 192
Query: 452 SGT-SPDYSPSSPQFSPSTGYSPS-QPGYSPSSTSQYTPKT 336
+ SP YSP SP+++P T S P Y+P++ + YTP++
Sbjct: 193 QRSGSPVYSPGSPEYTPLTPPKRSGSPAYTPAA-ANYTPRS 232
Score = 58.5 bits (140), Expect = 4e-07
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 28/103 (27%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSP---------SSPTYSPSSP---------YN 453
+SP++P T S SP YSP SP Y+P SP YSP++P
Sbjct: 90 YSPATPDPATPSSQRSGSPVYSPASPEYTPLLKPSSRRFGSPDYSPATPEYTPLTPSSQR 149
Query: 452 SGTSPDYSPSSPQFSP----------STGYSPSQPGYSPSSTS 354
SG SP YSP+SP+++P S YSP+ P Y+P + S
Sbjct: 150 SG-SPVYSPASPEYTPLLTPSSRRFGSPDYSPASPEYTPLTPS 191
Score = 57.4 bits (137), Expect = 8e-07
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 18/83 (21%)
Frame = -2
Query: 578 FSPSSP-YSPT---------SPSYSPTSPSYSPTSPS--------YSPSSPTYSPSSPYN 453
+SP+SP Y+P SP YSP SP Y+P +PS YSP SP Y+P +P
Sbjct: 155 YSPASPEYTPLLTPSSRRFGSPDYSPASPEYTPLTPSSQRSGSPVYSPGSPEYTPLTPPK 214
Query: 452 SGTSPDYSPSSPQFSPSTGYSPS 384
SP Y+P++ ++P + S S
Sbjct: 215 RSGSPAYTPAAANYTPRSPSSSS 237
[237][TOP]
>UniRef100_Q25655 RNA polymerase largest subunit (Fragment) n=1 Tax=Plasmodium
berghei RepID=Q25655_PLABE
Length = 204
Score = 66.6 bits (161), Expect = 1e-09
Identities = 47/101 (46%), Positives = 55/101 (54%), Gaps = 32/101 (31%)
Frame = -2
Query: 578 FSPSSPYSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSP 480
+SPS YSPTSP+ YSPTSP YS TSP YSP+SP
Sbjct: 40 YSPS--YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSP 97
Query: 479 TYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372
YSP+SP N+ +SP YSP +SP+FSP S YS S P Y
Sbjct: 98 KYSPTSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 138
Score = 64.7 bits (156), Expect = 5e-09
Identities = 44/103 (42%), Positives = 53/103 (51%), Gaps = 27/103 (26%)
Frame = -2
Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSG-- 447
+SP+SP Y+ SP YS TSP YSPTSP YSP+SP +PSSP S
Sbjct: 59 YSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYSPTSPVPNNPSSPQYSPYS 118
Query: 446 -TSPDYSPSSPQFSPS----------TGYSPSQPGYSPSSTSQ 351
TSP +SP+SP +S S TG +P P Y S Q
Sbjct: 119 ITSPKFSPTSPAYSISSPVYDKNENMTGKNPLSPAYMLQSRVQ 161
Score = 62.4 bits (150), Expect = 2e-08
Identities = 43/95 (45%), Positives = 50/95 (52%), Gaps = 32/95 (33%)
Frame = -2
Query: 548 SPSYSPTSPS--------YSPTSPS-------------------YSPSSPTYSPSSPYNS 450
SPSYSPTSP+ YSPTSP YS +SP YSP+SP S
Sbjct: 41 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYS 100
Query: 449 GTSP-DYSPSSPQFSP----STGYSPSQPGYSPSS 360
TSP +PSSPQ+SP S +SP+ P YS SS
Sbjct: 101 PTSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISS 135
[238][TOP]
>UniRef100_C6F096 RNA polymerase II (Fragment) n=1 Tax=Plasmodium yoelii nigeriensis
RepID=C6F096_9APIC
Length = 161
Score = 66.2 bits (160), Expect = 2e-09
Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S TSP YS SSP + +
Sbjct: 39 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKT 98
Query: 401 ---TGYSPSQPGYSPSSTSQ 351
G +P P Y S Q
Sbjct: 99 ENMAGKNPLSPAYMLQSRVQ 118
Score = 65.9 bits (159), Expect = 2e-09
Identities = 45/95 (47%), Positives = 51/95 (53%), Gaps = 32/95 (33%)
Frame = -2
Query: 560 YSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 462
YSPTSP+ YSPTSP YS TSP YSP+SP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 461 PY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372
P N+ +SP YSP +SP+FSP S YS S P Y
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95
[239][TOP]
>UniRef100_C6F093 RNA polymerase II (Fragment) n=2 Tax=Plasmodium yoelii
RepID=C6F093_PLAYO
Length = 161
Score = 66.2 bits (160), Expect = 2e-09
Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402
S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S TSP YS SSP + +
Sbjct: 39 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN 98
Query: 401 ---TGYSPSQPGYSPSSTSQ 351
G +P P Y S Q
Sbjct: 99 ENMAGKNPLSPAYMLQSRVQ 118
Score = 65.9 bits (159), Expect = 2e-09
Identities = 45/95 (47%), Positives = 51/95 (53%), Gaps = 32/95 (33%)
Frame = -2
Query: 560 YSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 462
YSPTSP+ YSPTSP YS TSP YSP+SP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 461 PY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372
P N+ +SP YSP +SP+FSP S YS S P Y
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95
[240][TOP]
>UniRef100_A9U3I4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9U3I4_PHYPA
Length = 291
Score = 65.9 bits (159), Expect = 2e-09
Identities = 46/80 (57%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPT----SPSYSPSSPTYS--PSSPYNSGTSPDYSPSSPQ 414
S SSP +P+SPSYS SP YSPT SPS +PSSPTYS P SP SG SP +PSSP
Sbjct: 185 SSSSPTTPSSPSYS--SPPYSPTPSDPSPS-TPSSPTYSSPPYSPTPSGPSPP-TPSSPT 240
Query: 413 FSPSTGYSPSQPGYSPSSTS 354
+S S YSP+ G SP++ S
Sbjct: 241 YS-SPPYSPTPSGSSPTTPS 259
Score = 64.7 bits (156), Expect = 5e-09
Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYS--PTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
S PYSPT SP+SP+YS P SP+ S SSPT +PSSP S +SP YSP+ SPST
Sbjct: 158 SPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPT-TPSSP--SYSSPPYSPTPSDPSPSTP 214
Query: 395 YSP--SQPGYSP--SSTSQYTPKTNDNKDDP 315
SP S P YSP S S TP + P
Sbjct: 215 SSPTYSSPPYSPTPSGPSPPTPSSPTYSSPP 245
Score = 64.3 bits (155), Expect = 7e-09
Identities = 43/79 (54%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYS--PSSPYNSGTSPDYSPSSPQFSPS 402
+PS P SP+SP+YS SP YSPT SPSSPTYS P SP S +SP +PSSP +S S
Sbjct: 145 APSGP-SPSSPTYS--SPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPT-TPSSPSYS-S 199
Query: 401 TGYSPSQPGYSPSSTSQYT 345
YSP+ SPS+ S T
Sbjct: 200 PPYSPTPSDPSPSTPSSPT 218
Score = 63.5 bits (153), Expect = 1e-08
Identities = 49/107 (45%), Positives = 57/107 (53%), Gaps = 20/107 (18%)
Frame = -2
Query: 575 SPSSPYSPTSPS-----YSPTSPSYSPTSPS-YSPSSPTYS--PSSPYNSGTSPD----- 435
S SSP +P+SP+ YSP S SPT+PS SPSSPTYS P SP SG+SP
Sbjct: 117 SSSSPTTPSSPTYSSPPYSPAPSSPSPTAPSGPSPSSPTYSSPPYSPTPSGSSPSSPTYS 176
Query: 434 ---YSPSSPQFSPSTGYSP--SQPGYS--PSSTSQYTPKTNDNKDDP 315
YSP+ SP+T SP S P YS PS S TP + P
Sbjct: 177 SPPYSPTPSSSSPTTPSSPSYSSPPYSPTPSDPSPSTPSSPTYSSPP 223
Score = 63.5 bits (153), Expect = 1e-08
Identities = 43/86 (50%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYS--PSSPTYSPSSPYN----SGTSPDYSPSSPQ 414
SPSSP + +SP YSPT SP+SP+YS P SPT S SSP S +SP YSP+
Sbjct: 150 SPSSP-TYSSPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPTTPSSPSYSSPPYSPTPSD 208
Query: 413 FSPSTGYSP--SQPGYSPSSTSQYTP 342
SPST SP S P YSP+ + P
Sbjct: 209 PSPSTPSSPTYSSPPYSPTPSGPSPP 234
Score = 62.8 bits (151), Expect = 2e-08
Identities = 45/90 (50%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Frame = -2
Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPTSPSYSP---SSPTYS--PSSPYNSGTSPDY---- 432
+SP +P SP +PS S +SP YSPT S SP SSPTYS P SP S SP
Sbjct: 90 YSPGTPSGGSPVTPSPSYSSPPYSPTPSSSSPTTPSSPTYSSPPYSPAPSSPSPTAPSGP 149
Query: 431 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342
SPSSP +S S YSP+ G SPSS + +P
Sbjct: 150 SPSSPTYS-SPPYSPTPSGSSPSSPTYSSP 178
Score = 62.4 bits (150), Expect = 2e-08
Identities = 43/78 (55%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Frame = -2
Query: 575 SPSSPYSPT--SPSYSPTSPSYSPTSPSYSPSSPTYS--PSSPYNSGTSPDYSPSSPQFS 408
SPS+P SPT SP YSPT SP +PSSPTYS P SP SG+SP +PSSP +S
Sbjct: 210 SPSTPSSPTYSSPPYSPTPSGPSPP----TPSSPTYSSPPYSPTPSGSSPT-TPSSPSYS 264
Query: 407 PSTGYSPSQPGYSPSSTS 354
S YSP+ G SPS S
Sbjct: 265 -SPPYSPTPSGGSPSGGS 281
Score = 60.8 bits (146), Expect = 7e-08
Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 11/96 (11%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPT--SPSYSPSSPTYSPSSPYN-SGTSPDYSPSSPQFSPS- 402
S PYSPT S SPT+PS SPT SP YSP+ + SP++P S +SP YS SP +SP+
Sbjct: 109 SPPYSPTPSSSSPTTPS-SPTYSSPPYSPAPSSPSPTAPSGPSPSSPTYS--SPPYSPTP 165
Query: 401 TGYSPSQPGYS-------PSSTSQYTPKTNDNKDDP 315
+G SPS P YS PSS+S TP + P
Sbjct: 166 SGSSPSSPTYSSPPYSPTPSSSSPTTPSSPSYSSPP 201
Score = 55.5 bits (132), Expect = 3e-06
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 8/81 (9%)
Frame = -2
Query: 572 PSSPYSPT-SPSY----SPTSPSYSPTSPSYSPSSPTY-SPSSPYNSGTSPDYSPSSPQF 411
P++PY+P+ SP SP +P+ +SP YSP +P+ SP +P S +SP YSP+
Sbjct: 60 PATPYTPSYSPPVASDPSPVTPTPVYSSPPYSPGTPSGGSPVTPSPSYSSPPYSPTPSSS 119
Query: 410 SPSTGYSP--SQPGYSPSSTS 354
SP+T SP S P YSP+ +S
Sbjct: 120 SPTTPSSPTYSSPPYSPAPSS 140
Score = 54.3 bits (129), Expect = 7e-06
Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Frame = -2
Query: 575 SPSSPYSPT----SPSYSPTSPSY-SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
S SP +PT SP YSP +PS SP +PS S SSP YSP+ +S T+P SSP +
Sbjct: 74 SDPSPVTPTPVYSSPPYSPGTPSGGSPVTPSPSYSSPPYSPTPSSSSPTTP----SSPTY 129
Query: 410 SPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315
S S YSP+ SP++ S +P + P
Sbjct: 130 S-SPPYSPAPSSPSPTAPSGPSPSSPTYSSPP 160
[241][TOP]
>UniRef100_C6F091 RNA polymerase II (Fragment) n=1 Tax=Plasmodium berghei
RepID=C6F091_PLABE
Length = 161
Score = 65.9 bits (159), Expect = 2e-09
Identities = 45/95 (47%), Positives = 51/95 (53%), Gaps = 32/95 (33%)
Frame = -2
Query: 560 YSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 462
YSPTSP+ YSPTSP YS TSP YSP+SP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 461 PY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372
P N+ +SP YSP +SP+FSP S YS S P Y
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95
Score = 65.9 bits (159), Expect = 2e-09
Identities = 45/103 (43%), Positives = 53/103 (51%), Gaps = 27/103 (26%)
Frame = -2
Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSG-- 447
+SP+SP Y+ SP YS TSP YSPTSP YSPSSP +PSSP S
Sbjct: 16 YSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYS 75
Query: 446 -TSPDYSPSSPQFSPS----------TGYSPSQPGYSPSSTSQ 351
TSP +SP+SP +S S TG +P P Y S Q
Sbjct: 76 ITSPKFSPTSPAYSISSPVYDKNENMTGKNPLSPAYMLQSRVQ 118
[242][TOP]
>UniRef100_A0E2M3 Chromosome undetermined scaffold_75, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0E2M3_PARTE
Length = 288
Score = 65.9 bits (159), Expect = 2e-09
Identities = 33/90 (36%), Positives = 36/90 (40%), Gaps = 10/90 (11%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPT----------SPSYSPSSPTYSPSSPYNSGTSPDYS 429
+ P PY P P Y PT P Y P P Y P P Y P P P Y
Sbjct: 154 YPPQQPYPPQQPGY-PTQPGYPPQPGYPAQPYPQQPGYPPQQPGYPPQQPGYPPQQPGYP 212
Query: 428 PSSPQFSPSTGYSPSQPGYSPSSTSQYTPK 339
P P + P GY P QPGY P Y P+
Sbjct: 213 PQQPGYPPQPGYPPQQPGYPPQQPG-YPPQ 241
Score = 60.8 bits (146), Expect = 7e-08
Identities = 32/82 (39%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = -2
Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405
+ P P Y P P Y P P Y P P Y P P Y P P P Y P P + P
Sbjct: 190 YPPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQ-PGYPPQQPGYPPQQPGYPPQQPGYPPQ 248
Query: 404 STGYSPSQPGYSPSSTSQYTPK 339
GY P QPGY QY P+
Sbjct: 249 QPGYPPQQPGY---PAQQYPPQ 267
Score = 56.6 bits (135), Expect = 1e-06
Identities = 27/69 (39%), Positives = 30/69 (43%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+ P P P P Y P P Y P P Y P P Y P P P Y + Q+ P
Sbjct: 211 YPPQQPGYPPQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGY--PAQQYPPQQ 268
Query: 398 GYSPSQPGY 372
GY P QPGY
Sbjct: 269 GY-PPQPGY 276
Score = 55.1 bits (131), Expect = 4e-06
Identities = 35/90 (38%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402
+ P Y P P Y P P Y PT P Y P P Y P+ PY P Y P P + P
Sbjct: 148 YPPQPGYPPQQP-YPPQQPGY-PTQPGYPPQ-PGY-PAQPYPQ--QPGYPPQQPGYPPQQ 201
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
GY P QPGY P Y P+ PG
Sbjct: 202 PGYPPQQPGYPPQQPG-YPPQPGYPPQQPG 230
[243][TOP]
>UniRef100_UPI0001B7BF92 zinc finger protein 768 n=1 Tax=Rattus norvegicus
RepID=UPI0001B7BF92
Length = 570
Score = 65.5 bits (158), Expect = 3e-09
Identities = 34/100 (34%), Positives = 42/100 (42%), Gaps = 9/100 (9%)
Frame = -2
Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423
F P SP + P SP + SP + P SP ++P SP P SP S Y P
Sbjct: 67 FEPQSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSSRYEPQ 126
Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306
SP + P S GY P P Y P S + PG +
Sbjct: 127 SPGYDPKSPGYEPGSPRYEPKSPGYGSKSPEFESQSPGCE 166
Score = 65.1 bits (157), Expect = 4e-09
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Frame = -2
Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPST 399
P SP + P SP + SP + P SP + SP + P SP + SP+ P SP+F S S+
Sbjct: 62 PQSPGFEPQSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSS 121
Query: 398 GYSPSQPGYSPSS------TSQYTPKT 336
Y P PGY P S + +Y PK+
Sbjct: 122 RYEPQSPGYDPKSPGYEPGSPRYEPKS 148
Score = 63.5 bits (153), Expect = 1e-08
Identities = 33/92 (35%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = -2
Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
RF P SP + SP + P SP ++P SP P SP + S SP Y P SP + P
Sbjct: 80 RFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSSRYEPQSPGYDPKSPGYEP 139
Query: 404 -STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
S Y P PGY S + PG
Sbjct: 140 GSPRYEPKSPGYGSKSPEFESQSPGCESQSPG 171
Score = 58.9 bits (141), Expect = 3e-07
Identities = 30/80 (37%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF------ 411
PS ++P SP P SP + S Y P SP Y P SP SP Y P SP +
Sbjct: 98 PSPEFAPRSPESDPQSPEFESQSSRYEPQSPGYDPKSPGYEPGSPRYEPKSPGYGSKSPE 157
Query: 410 --SPSTGYSPSQPGYSPSST 357
S S G PGY P ++
Sbjct: 158 FESQSPGCESQSPGYEPQNS 177
Score = 58.2 bits (139), Expect = 5e-07
Identities = 27/57 (47%), Positives = 28/57 (49%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
S SS Y P SP Y P SP Y P SP Y P SP Y SP SP SP + P
Sbjct: 118 SQSSRYEPQSPGYDPKSPGYEPGSPRYEPKSPGYGSKSPEFESQSPGCESQSPGYEP 174
[244][TOP]
>UniRef100_Q1WKU4 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila erecta RepID=Q1WKU4_DROER
Length = 760
Score = 65.5 bits (158), Expect = 3e-09
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
Frame = -2
Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438
FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP
Sbjct: 660 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 719
Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360
YSP+SP ++ S+ YSPS P YSP+S
Sbjct: 720 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 751
Score = 64.3 bits (155), Expect = 7e-09
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-Y 393
SSP SP PS SP P+ SPSYSP+SP Y+ SSP G SP+YSPSSP +SP++ Y
Sbjct: 698 SSPSSP-GPSMSPYFPASPSVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLY 754
Query: 392 SPSQP 378
+ + P
Sbjct: 755 ASASP 759
Score = 57.8 bits (138), Expect = 6e-07
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 6/52 (11%)
Frame = -2
Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSP 438
SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP
Sbjct: 708 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASP 759
[245][TOP]
>UniRef100_UPI000179248D PREDICTED: similar to RR2 cuticle protein 3 n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179248D
Length = 299
Score = 65.1 bits (157), Expect = 4e-09
Identities = 37/78 (47%), Positives = 54/78 (69%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SPSSP +P++PS +P++PSYSP +PSYSP+ P YSP+ Y+ +P Y P+ P +SP+
Sbjct: 29 SPSSPSAPSAPS-APSAPSYSP-APSYSPA-PLYSPAPSYSP--APAYKPA-PSYSPAPS 82
Query: 395 YSPSQPGYSPSSTSQYTP 342
YSP+ P Y P+ + P
Sbjct: 83 YSPA-PAYKPAPAYKPAP 99
Score = 61.6 bits (148), Expect = 4e-08
Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = -2
Query: 575 SPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
SPS+P +P++PSYSP +PSYSP +P YSP +P+YSP+ Y +P YSP +P +SP
Sbjct: 32 SPSAPSAPSAPSAPSYSP-APSYSP-APLYSP-APSYSPAPAYK--PAPSYSP-APSYSP 85
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
+ Y P+ P Y P+ + + +P
Sbjct: 86 APAYKPA-PAYKPAPSYKPSP 105
Score = 58.2 bits (139), Expect = 5e-07
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
PS P SP+SPS +P++PS +P++PSYSP +P+YSP+ Y+ +P YSP +P + P+ Y
Sbjct: 25 PSYP-SPSSPS-APSAPS-APSAPSYSP-APSYSPAPLYS--PAPSYSP-APAYKPAPSY 77
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+ + P
Sbjct: 78 SPA-PSYSPAPAYKPAP 93
Score = 55.8 bits (133), Expect = 2e-06
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP+ YSP +P YSP +PSYSP +P+Y P +P+YSP+ Y+ +P Y P +P + P+
Sbjct: 47 YSPAPSYSP-APLYSP-APSYSP-APAYKP-APSYSPAPSYS--PAPAYKP-APAYKPAP 99
Query: 398 GYSPSQPGYSPSSTS 354
Y PS P YS S S
Sbjct: 100 SYKPS-PSYSAPSYS 113
[246][TOP]
>UniRef100_C4WTF5 ACYPI006712 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WTF5_ACYPI
Length = 304
Score = 65.1 bits (157), Expect = 4e-09
Identities = 37/78 (47%), Positives = 54/78 (69%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SPSSP +P++PS +P++PSYSP +PSYSP+ P YSP+ Y+ +P Y P+ P +SP+
Sbjct: 29 SPSSPSAPSAPS-APSAPSYSP-APSYSPA-PLYSPAPSYSP--APAYKPA-PSYSPAPS 82
Query: 395 YSPSQPGYSPSSTSQYTP 342
YSP+ P Y P+ + P
Sbjct: 83 YSPA-PAYKPAPAYKPAP 99
Score = 61.6 bits (148), Expect = 4e-08
Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = -2
Query: 575 SPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
SPS+P +P++PSYSP +PSYSP +P YSP +P+YSP+ Y +P YSP +P +SP
Sbjct: 32 SPSAPSAPSAPSAPSYSP-APSYSP-APLYSP-APSYSPAPAYK--PAPSYSP-APSYSP 85
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
+ Y P+ P Y P+ + + +P
Sbjct: 86 APAYKPA-PAYKPAPSYKPSP 105
Score = 58.2 bits (139), Expect = 5e-07
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
PS P SP+SPS +P++PS +P++PSYSP +P+YSP+ Y+ +P YSP +P + P+ Y
Sbjct: 25 PSYP-SPSSPS-APSAPS-APSAPSYSP-APSYSPAPLYS--PAPSYSP-APAYKPAPSY 77
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+ + P
Sbjct: 78 SPA-PSYSPAPAYKPAP 93
Score = 55.8 bits (133), Expect = 2e-06
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP+ YSP +P YSP +PSYSP +P+Y P +P+YSP+ Y+ +P Y P +P + P+
Sbjct: 47 YSPAPSYSP-APLYSP-APSYSP-APAYKP-APSYSPAPSYS--PAPAYKP-APAYKPAP 99
Query: 398 GYSPSQPGYSPSSTS 354
Y PS P YS S S
Sbjct: 100 SYKPS-PSYSAPSYS 113
[247][TOP]
>UniRef100_C4WTF4 ACYPI006712 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WTF4_ACYPI
Length = 299
Score = 65.1 bits (157), Expect = 4e-09
Identities = 37/78 (47%), Positives = 54/78 (69%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396
SPSSP +P++PS +P++PSYSP +PSYSP+ P YSP+ Y+ +P Y P+ P +SP+
Sbjct: 29 SPSSPSAPSAPS-APSAPSYSP-APSYSPA-PLYSPAPSYSP--APAYKPA-PSYSPAPS 82
Query: 395 YSPSQPGYSPSSTSQYTP 342
YSP+ P Y P+ + P
Sbjct: 83 YSPA-PAYKPAPAYKPAP 99
Score = 61.6 bits (148), Expect = 4e-08
Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = -2
Query: 575 SPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405
SPS+P +P++PSYSP +PSYSP +P YSP +P+YSP+ Y +P YSP +P +SP
Sbjct: 32 SPSAPSAPSAPSAPSYSP-APSYSP-APLYSP-APSYSPAPAYK--PAPSYSP-APSYSP 85
Query: 404 STGYSPSQPGYSPSSTSQYTP 342
+ Y P+ P Y P+ + + +P
Sbjct: 86 APAYKPA-PAYKPAPSYKPSP 105
Score = 58.2 bits (139), Expect = 5e-07
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393
PS P SP+SPS +P++PS +P++PSYSP +P+YSP+ Y+ +P YSP +P + P+ Y
Sbjct: 25 PSYP-SPSSPS-APSAPS-APSAPSYSP-APSYSPAPLYS--PAPSYSP-APAYKPAPSY 77
Query: 392 SPSQPGYSPSSTSQYTP 342
SP+ P YSP+ + P
Sbjct: 78 SPA-PSYSPAPAYKPAP 93
Score = 55.8 bits (133), Expect = 2e-06
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = -2
Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399
+SP+ YSP +P YSP +PSYSP +P+Y P +P+YSP+ Y+ +P Y P +P + P+
Sbjct: 47 YSPAPSYSP-APLYSP-APSYSP-APAYKP-APSYSPAPSYS--PAPAYKP-APAYKPAP 99
Query: 398 GYSPSQPGYSPSSTS 354
Y PS P YS S S
Sbjct: 100 SYKPS-PSYSAPSYS 113
[248][TOP]
>UniRef100_O04142 DNA-directed RNA polymerase (Fragment) n=1 Tax=Porphyra yezoensis
RepID=O04142_PORYE
Length = 1685
Score = 64.7 bits (156), Expect = 5e-09
Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 23/105 (21%)
Frame = -2
Query: 581 RFSPSSP-YSPTSP---------------SYSPTSPSYSPTSPS--YSPSSPTYSPSSPY 456
R SP+SP Y+ SP +Y+P SP+Y TSP YSPS+P + SSP
Sbjct: 1548 RMSPASPGYAAMSPRFGGGLCGGPAGGAGAYAPASPAYMATSPGMGYSPSTPALAVSSP- 1606
Query: 455 NSGTSPDYSPSSPQFS----PSTGY-SPSQPGYSPSSTSQYTPKT 336
G SP YSP+SP P+ GY SP PGY P+S + P T
Sbjct: 1607 --GYSPGYSPTSPSVGARGGPAAGYASPQSPGYVPTSPAYARPGT 1649
Score = 61.2 bits (147), Expect = 6e-08
Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 21/94 (22%)
Frame = -2
Query: 578 FSPSSP-YSPTSPS--YSPTSPSYSPTSPSYSPSSPTYSPSSP-----------YNSGTS 441
++P+SP Y TSP YSP++P+ + +SP YSP YSP+SP Y S S
Sbjct: 1578 YAPASPAYMATSPGMGYSPSTPALAVSSPGYSPG---YSPTSPSVGARGGPAAGYASPQS 1634
Query: 440 PDYSPSSPQFS-PST------GYSPSQPGYSPSS 360
P Y P+SP ++ P T YSPS P YSPSS
Sbjct: 1635 PGYVPTSPAYARPGTVVAAANVYSPSSPAYSPSS 1668
Score = 61.2 bits (147), Expect = 6e-08
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 18/96 (18%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYS----PSSPYNSGTSPDYSPSSPQF- 411
SP YSP++P+ + +SP YSP YSP+SP+ P++ Y S SP Y P+SP +
Sbjct: 1589 SPGMGYSPSTPALAVSSPGYSP---GYSPTSPSVGARGGPAAGYASPQSPGYVPTSPAYA 1645
Query: 410 ------------SPST-GYSPSQPGYSPSSTSQYTP 342
SPS+ YSPS P Y+ +S+ Y P
Sbjct: 1646 RPGTVVAAANVYSPSSPAYSPSSPNYAAASSPAYQP 1681
[249][TOP]
>UniRef100_C4XYJ5 Predicted protein n=1 Tax=Clavispora lusitaniae ATCC 42720
RepID=C4XYJ5_CLAL4
Length = 953
Score = 64.7 bits (156), Expect = 5e-09
Identities = 49/95 (51%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSPYNSGT-----SPDYSPSSP 417
SP SP SP+SPS SP SPS SP+SP S SP SP SP SP SG+ SP SPSSP
Sbjct: 703 SPGSPGSPSSPSGSPGSPS-SPSSPGASGSPGSPG-SPGSPGASGSPGSPGSPG-SPSSP 759
Query: 416 QFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
SP + SPS PG S S S +P + PG
Sbjct: 760 SGSPGSPSSPSSPGASGSPGSPGSPGSPGASGAPG 794
Score = 58.9 bits (141), Expect = 3e-07
Identities = 49/113 (43%), Positives = 56/113 (49%), Gaps = 24/113 (21%)
Frame = -2
Query: 575 SPSSPYSPTSP--SYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGT------------ 444
SP SP SP SP S SP SP SP+SPS SP SP+ SPSSP SG+
Sbjct: 639 SPGSPGSPGSPGASGSPGSPGSPGSPSSPSGSPGSPS-SPSSPGASGSPGSPGSPGSPGA 697
Query: 443 --------SPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
SP SPSSP SP + SPS PG S S S +P + PG+
Sbjct: 698 SGSPGSPGSPG-SPSSPSGSPGSPSSPSSPGASGSPGSPGSPGSPGASGSPGS 749
Score = 58.2 bits (139), Expect = 5e-07
Identities = 50/94 (53%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Frame = -2
Query: 575 SPSSPYSPTSP--SYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGT--SPDYSPSSPQ 414
SP SP SP SP S SP SP SP+SPS SP SP+ SPSSP SG+ SP SP SP
Sbjct: 685 SPGSPGSPGSPGASGSPGSPGSPGSPSSPSGSPGSPS-SPSSPGASGSPGSPG-SPGSPG 742
Query: 413 FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312
S S G SP PG SPSS S +P + + PG
Sbjct: 743 ASGSPG-SPGSPG-SPSSPSG-SPGSPSSPSSPG 773
Score = 57.4 bits (137), Expect = 8e-07
Identities = 47/95 (49%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411
SP SP SP+SPS SP SP S SP SP SP SP SPSSP +S + SP SP
Sbjct: 521 SPGSPGSPSSPSGSPGSPGSPGASGSPGSPG-SPGSPG-SPSSPGSSESGSPGSPGSPGA 578
Query: 410 SPSTGY--SPSQPGYSPSSTSQYTPKTNDNKDDPG 312
S S G SP PG SPSS S +P + + PG
Sbjct: 579 SGSPGSPGSPGSPG-SPSSPSG-SPGSPSSPGSPG 611
Score = 56.2 bits (134), Expect = 2e-06
Identities = 41/91 (45%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPS 402
SP SP SP SP SP+SP S + SP SP + SP SP + G SP SPSSP SP
Sbjct: 546 SPGSPGSPGSPG-SPSSPGSSESGSPGSPGSPGASGSPGSPGSPG-SPG-SPSSPSGSPG 602
Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
+ SP PG S S S +P + PG+
Sbjct: 603 SPSSPGSPGASGSPGSPGSPGSPGASGAPGS 633
Score = 55.5 bits (132), Expect = 3e-06
Identities = 49/119 (41%), Positives = 55/119 (46%), Gaps = 30/119 (25%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSP--SYSPSSP-----------------------TYS 471
SP SP SP+SPS SP SPS SP SP S SP SP S
Sbjct: 587 SPGSPGSPSSPSGSPGSPS-SPGSPGASGSPGSPGSPGSPGASGAPGSPGSPGSPGSPGS 645
Query: 470 PSSPYNSGT-----SPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
P SP SG+ SP SPSSP SP + SPS PG S S S +P + PG+
Sbjct: 646 PGSPGASGSPGSPGSPG-SPSSPSGSPGSPSSPSSPGASGSPGSPGSPGSPGASGSPGS 703
Score = 55.1 bits (131), Expect = 4e-06
Identities = 46/95 (48%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Frame = -2
Query: 575 SPSSPYSPTSP--SYSPTSPSYSPTSP--SYSPSSP--TYSPSSPYNSGTSPDYSPSSPQ 414
SP SP SP+SP S SP SP SP SP S SP SP SPSSP S SP SPSSP
Sbjct: 716 SPGSPSSPSSPGASGSPGSPG-SPGSPGASGSPGSPGSPGSPSSPSGSPGSPS-SPSSPG 773
Query: 413 FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
S S G SP PG +S + P + + PG+
Sbjct: 774 ASGSPG-SPGSPGSPGASGAPGAPGSPGSPGSPGS 807
Score = 54.7 bits (130), Expect = 5e-06
Identities = 45/111 (40%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSP--SYSPSSPTY--------------------SPSS 462
SP SP SP+SPS SP SPS SP+SP S SP SP SP S
Sbjct: 749 SPGSPGSPSSPSGSPGSPS-SPSSPGASGSPGSPGSPGSPGASGAPGAPGSPGSPGSPGS 807
Query: 461 PYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309
P + G+S SPSSP S S SPS SPS++ +P ++ + PG+
Sbjct: 808 PSSPGSSESGSPSSP--SASESGSPS----SPSASESGSPGSSGSPGSPGS 852
[250][TOP]
>UniRef100_A9S7U4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9S7U4_PHYPA
Length = 296
Score = 64.3 bits (155), Expect = 7e-09
Identities = 41/82 (50%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Frame = -2
Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS----SPQFSP 405
PS P P SP Y SP Y+ SP Y SP YSPS Y S SP YSPS SP +SP
Sbjct: 215 PSCPPPPESPVYE--SPPYASPSPVYE--SPPYSPSPVYESPPSPTYSPSPVYKSPTYSP 270
Query: 404 STGY-SPSQPGYSPSSTSQYTP 342
S Y SP P YSPS + P
Sbjct: 271 SPVYKSPPSPSYSPSPVYKSPP 292
Score = 59.3 bits (142), Expect = 2e-07
Identities = 35/64 (54%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = -2
Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPS----SPTYSPSSPYNSGTSPDYSPSSPQFS 408
SPS Y SP YSP+ SP SP+YSPS SPTYSPS Y S SP YSPS S
Sbjct: 233 SPSPVYE--SPPYSPSPVYESPPSPTYSPSPVYKSPTYSPSPVYKSPPSPSYSPSPVYKS 290
Query: 407 PSTG 396
P G
Sbjct: 291 PPAG 294
Score = 58.2 bits (139), Expect = 5e-07
Identities = 38/71 (53%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Frame = -2
Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---SPDY-SPSSPQFSPS 402
S PY+ SP Y SP YSP+ SP SPTYSPS Y S T SP Y SP SP +SPS
Sbjct: 228 SPPYASPSPVYE--SPPYSPSPVYESPPSPTYSPSPVYKSPTYSPSPVYKSPPSPSYSPS 285
Query: 401 TGY-SPSQPGY 372
Y SP GY
Sbjct: 286 PVYKSPPAGGY 296