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[1][TOP] >UniRef100_Q99367 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max RepID=Q99367_SOYBN Length = 494 Score = 177 bits (450), Expect = 4e-43 Identities = 84/92 (91%), Positives = 88/92 (95%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 R SPSSPYSPTSP+YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG SPDYSPSSPQFSPS Sbjct: 404 RLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPS 463 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306 TGYSPSQPGYSPSSTSQYTP+T+D KDD GT+ Sbjct: 464 TGYSPSQPGYSPSSTSQYTPQTSD-KDDGGTR 494 Score = 118 bits (295), Expect = 4e-25 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 301 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 360 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S GYSP+ P YSP+S S Y+P Sbjct: 361 SPGYSPTSPSYSPTSPS-YSP 380 Score = 117 bits (293), Expect = 6e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 294 YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 353 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ PGYSP+S S Y+P Sbjct: 354 SPAYSPTSPGYSPTSPS-YSP 373 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 252 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 311 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 312 SPAYSPTSPSYSPTSPS-YSP 331 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 273 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 332 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 333 SPSYSPTSPSYSPTSPS-YSP 352 Score = 116 bits (291), Expect = 1e-24 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 266 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPT 325 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 326 SPSYSPTSPSYSPTSPS-YSP 345 Score = 116 bits (290), Expect = 1e-24 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 259 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPT 318 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 319 SPSYSPTSPSYSPTSPS-YSP 338 Score = 115 bits (288), Expect = 2e-24 Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP Sbjct: 217 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 276 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 277 SPSYSPTSPSYSPTSPS-YSP 296 Score = 115 bits (288), Expect = 2e-24 Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 315 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 374 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P Y+P S ++Y+P + P Sbjct: 375 SPSYSPTSPSYNPQS-AKYSPSLAYSPSSP 403 Score = 113 bits (282), Expect = 1e-23 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 245 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 304 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 305 SPAYSPTSPAYSPTSPS-YSP 324 Score = 111 bits (278), Expect = 4e-23 Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+P S ++SPS Sbjct: 336 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 395 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSPS P SPS S Y+P Sbjct: 396 LAYSPSSPRLSPS--SPYSP 413 Score = 110 bits (276), Expect = 6e-23 Identities = 53/81 (65%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 238 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 297 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 298 SPSYSPTSPAYSPTSPA-YSP 317 Score = 105 bits (263), Expect = 2e-21 Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 3/82 (3%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 FSP+S YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP Sbjct: 202 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 261 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 262 TSPAYSPTSPSYSPTSPS-YSP 282 Score = 89.0 bits (219), Expect = 2e-16 Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 12/90 (13%) Frame = -2 Query: 575 SPSSPYSPTSPS----------YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 SP+ SPTS + +SPTS P YSP+SP YSPSSP YSP+SP S TSP YS Sbjct: 180 SPNLRLSPTSDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYS 239 Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P+SP +SP S YSPS PGYSP+S + Y+P Sbjct: 240 PTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 268 [2][TOP] >UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA binding / DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=UPI0001985649 Length = 1848 Score = 162 bits (411), Expect = 1e-38 Identities = 76/92 (82%), Positives = 83/92 (90%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 R SPSSPYSPTSP+YSPTSPSYSPTSPSYSP+SPTYSP+SPYNSG SPDYSPSSPQ+SPS Sbjct: 1758 RLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPS 1817 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306 GYSPS PGYSPSSTSQYTP+ + NKD+ Q Sbjct: 1818 AGYSPSAPGYSPSSTSQYTPQMS-NKDNGSPQ 1848 Score = 118 bits (295), Expect = 4e-25 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1655 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1714 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S GYSP+ P YSP+S S Y+P Sbjct: 1715 SPGYSPTSPSYSPTSPS-YSP 1734 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPT 1665 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1666 SPAYSPTSPSYSPTSPS-YSP 1685 Score = 117 bits (293), Expect = 6e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1648 YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1707 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ PGYSP+S S Y+P Sbjct: 1708 SPAYSPTSPGYSPTSPS-YSP 1727 Score = 117 bits (292), Expect = 8e-25 Identities = 58/90 (64%), Positives = 71/90 (78%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1728 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P Y+PSS ++Y+P + P Sbjct: 1729 SPSYSPTSPSYNPSS-AKYSPSLAYSPSSP 1757 Score = 115 bits (288), Expect = 2e-24 Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP Sbjct: 1550 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 1609 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1610 SPSYSPTSPSYSPTSPS-YSP 1629 Score = 115 bits (288), Expect = 2e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1651 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1652 SPSYSPTSPAYSPTSPA-YSP 1671 Score = 115 bits (287), Expect = 3e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1585 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1645 SPVYSPTSPSYSPTSPA-YSP 1664 Score = 114 bits (286), Expect = 4e-24 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1686 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1687 SPSYSPTSPSYSPTSPS-YSP 1706 Score = 113 bits (282), Expect = 1e-23 Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+PSS ++SPS Sbjct: 1690 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPS 1749 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSPS P SPS S Y+P Sbjct: 1750 LAYSPSSPRLSPS--SPYSP 1767 Score = 112 bits (279), Expect = 3e-23 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1578 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1638 SPSYSPTSPVYSPTSPS-YSP 1657 Score = 109 bits (273), Expect = 1e-22 Identities = 51/75 (68%), Positives = 63/75 (84%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1571 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630 Query: 404 STGYSPSQPGYSPSS 360 S YSP+ P YSP+S Sbjct: 1631 SPSYSPTSPSYSPTS 1645 Score = 105 bits (263), Expect = 2e-21 Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 3/82 (3%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 FSP+S YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP Sbjct: 1535 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 1594 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1595 TSPAYSPTSPSYSPTSPS-YSP 1615 Score = 87.0 bits (214), Expect = 9e-16 Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 2/69 (2%) Frame = -2 Query: 542 SYSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369 ++SPTS P YSP+SP YSPSSP YSP+SP S TSP YSP+SP +SP S YSPS PGYS Sbjct: 1534 AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 1593 Query: 368 PSSTSQYTP 342 P+S + Y+P Sbjct: 1594 PTSPA-YSP 1601 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 54/87 (62%), Gaps = 7/87 (8%) Frame = -2 Query: 575 SPSSPYSP-TSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQ 414 SP+ SP T +SP ++SPTS SP YSPSSP G +SP YSP+SP Sbjct: 1513 SPNLRLSPITDAQFSPYVGGMAFSPTS------SPGYSPSSP---GYSPSSPGYSPTSPG 1563 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKT 336 +SP S GYSP+ PGYSP+S + Y+P + Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPT-YSPSS 1589 [3][TOP] >UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9SXC0_RICCO Length = 1855 Score = 162 bits (409), Expect = 2e-38 Identities = 77/96 (80%), Positives = 82/96 (85%), Gaps = 1/96 (1%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 R SPSSPYSPTSP+YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG PDYSPSSPQ+SPS Sbjct: 1751 RLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVGPDYSPSSPQYSPS 1810 Query: 401 TGYSPSQPGYSPSSTSQYT-PKTNDNKDDPGTQ*AR 297 GYSPS PGYSPSSTSQYT T D++ D G + R Sbjct: 1811 AGYSPSAPGYSPSSTSQYTQTSTKDDRTDKGDRNGR 1846 Score = 118 bits (295), Expect = 4e-25 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1648 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1707 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S GYSP+ P YSP+S S Y+P Sbjct: 1708 SPGYSPTSPSYSPTSPS-YSP 1727 Score = 117 bits (293), Expect = 6e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1641 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ PGYSP+S S Y+P Sbjct: 1701 SPAYSPTSPGYSPTSPS-YSP 1720 Score = 116 bits (291), Expect = 1e-24 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1651 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1652 SPAYSPTSPAYSPTSPS-YSP 1671 Score = 116 bits (290), Expect = 1e-24 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPT 1672 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1673 SPSYSPTSPSYSPTSPS-YSP 1692 Score = 115 bits (288), Expect = 2e-24 Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP Sbjct: 1550 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 1609 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1610 SPSYSPTSPSYSPTSPS-YSP 1629 Score = 115 bits (288), Expect = 2e-24 Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1721 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P Y+P S ++Y+P + P Sbjct: 1722 SPSYSPTSPSYNPQS-AKYSPSLAYSPSSP 1750 Score = 115 bits (287), Expect = 3e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1585 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1645 SPVYSPTSPAYSPTSPA-YSP 1664 Score = 114 bits (286), Expect = 4e-24 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1679 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1680 SPSYSPTSPSYSPTSPS-YSP 1699 Score = 111 bits (278), Expect = 4e-23 Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+P S ++SPS Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 1742 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSPS P SPS S Y+P Sbjct: 1743 LAYSPSSPRLSPS--SPYSP 1760 Score = 110 bits (276), Expect = 6e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1578 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1638 SPSYSPTSPVYSPTSPA-YSP 1657 Score = 109 bits (273), Expect = 1e-22 Identities = 51/75 (68%), Positives = 63/75 (84%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1571 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630 Query: 404 STGYSPSQPGYSPSS 360 S YSP+ P YSP+S Sbjct: 1631 SPSYSPTSPSYSPTS 1645 Score = 107 bits (267), Expect = 7e-22 Identities = 64/117 (54%), Positives = 72/117 (61%), Gaps = 28/117 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSY-------------SPSSPTYSPSSPYNSGTS 441 +SP+SP YSPTSPSYSPTSPSYSPTSPSY SPSSP SPSSPY S TS Sbjct: 1704 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPY-SPTS 1762 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPS-------------STSQYTPKTNDNKDDPG 312 P+YSP+SP +SP S YSPS P YSPS S+ QY+P + PG Sbjct: 1763 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVGPDYSPSSPQYSPSAGYSPSAPG 1819 Score = 104 bits (260), Expect = 4e-21 Identities = 55/82 (67%), Positives = 64/82 (78%), Gaps = 3/82 (3%) Frame = -2 Query: 578 FSPS-SP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 FSP+ SP YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP Sbjct: 1535 FSPTLSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 1594 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1595 TSPAYSPTSPSYSPTSPS-YSP 1615 Score = 89.7 bits (221), Expect = 1e-16 Identities = 52/87 (59%), Positives = 61/87 (70%), Gaps = 7/87 (8%) Frame = -2 Query: 581 RFSPS-----SPYSPTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 R SP+ SPY P +SPT SP YSP+SP YSPSSP YSP+SP S TSP YSP+S Sbjct: 1517 RLSPTTDAQFSPYVSGMP-FSPTLSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTS 1575 Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTP 342 P +SP S YSPS PGYSP+S + Y+P Sbjct: 1576 PGYSPTSPTYSPSSPGYSPTSPA-YSP 1601 Score = 72.0 bits (175), Expect = 3e-11 Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 5/85 (5%) Frame = -2 Query: 575 SPSSPYSPTSPS-YSP--TSPSYSPT-SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 SPS SPT+ + +SP + +SPT SP YSPSSP YSPSSP YSP+SP +S Sbjct: 1513 SPSLRLSPTTDAQFSPYVSGMPFSPTLSPGYSPSSPGYSPSSP-------GYSPTSPGYS 1565 Query: 407 P-STGYSPSQPGYSPSSTSQYTPKT 336 P S GYSP+ PGYSP+S + Y+P + Sbjct: 1566 PTSPGYSPTSPGYSPTSPT-YSPSS 1589 [4][TOP] >UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max RepID=Q99368_SOYBN Length = 977 Score = 157 bits (396), Expect = 7e-37 Identities = 74/87 (85%), Positives = 80/87 (91%), Gaps = 1/87 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SPSSP SPTSP+YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG SPDYSP+SPQFSPS Sbjct: 891 YSPSSPRLSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPTSPQFSPS 950 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKD 321 GYSPSQPGYSPSSTSQ TP+T+D + Sbjct: 951 AGYSPSQPGYSPSSTSQDTPQTSDKDE 977 Score = 110 bits (276), Expect = 6e-23 Identities = 56/81 (69%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP YSPTSP YSPTSP+YSPSSP YSP+SP S TSP YSP+SP +SP Sbjct: 738 YSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPT 797 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YS + P YSP+S S Y+P Sbjct: 798 SPAYSSTSPAYSPTSPS-YSP 817 Score = 110 bits (276), Expect = 6e-23 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YS TSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 787 YSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPT 846 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 847 SPSYSPTSPAYSPTSPS-YSP 866 Score = 109 bits (273), Expect = 1e-22 Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSP+SP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP Sbjct: 731 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 790 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YS S++ Y+P Sbjct: 791 SPAYSPTSPAYS-STSPAYSP 810 Score = 109 bits (273), Expect = 1e-22 Identities = 56/90 (62%), Positives = 68/90 (75%), Gaps = 9/90 (10%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTSPSYSPTSP+YSPTSPSYS +SP+YSP+SP S TSP YSP+ Sbjct: 794 YSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPT 853 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 SP +SP S YSP+ P YSP+S S Y P++ Sbjct: 854 SPAYSPTSPSYSPTSPSYSPTSPS-YNPQS 882 Score = 108 bits (271), Expect = 2e-22 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 759 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPT 818 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YS +S S Y+P Sbjct: 819 SPAYSPTSPSYSLTSPS-YSP 838 Score = 105 bits (263), Expect = 2e-21 Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYS TSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 815 YSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 874 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S Y+P YSPS Y+P + Sbjct: 875 SPSYNPQSAKYSPSLA--YSPSS 895 Score = 102 bits (255), Expect = 2e-20 Identities = 50/76 (65%), Positives = 59/76 (77%), Gaps = 3/76 (3%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 FSPSS YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S +SP YSP+SP +SP Sbjct: 723 FSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 782 Query: 404 -STGYSPSQPGYSPSS 360 S YSP+ P YSP+S Sbjct: 783 TSPSYSPTSPAYSPTS 798 Score = 99.0 bits (245), Expect = 2e-19 Identities = 56/88 (63%), Positives = 65/88 (73%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP+YSPTSPSYSPTSP+YSP+SP YS +SP S TSP YSP+SP +SP Sbjct: 766 YSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPT 825 Query: 404 STGYS---PSQP----GYSPSSTSQYTP 342 S YS PS YSP+S S Y+P Sbjct: 826 SPSYSLTSPSYSPTSPSYSPTSPS-YSP 852 Score = 90.1 bits (222), Expect = 1e-16 Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 6/86 (6%) Frame = -2 Query: 581 RFSPSSP--YSPT--SPSYSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 R SPSS +SP ++SP+S P YSP+SP YSPSSP YSP+SP S TSP YSP+SP Sbjct: 705 RLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 764 Query: 416 QFSPST-GYSPSQPGYSPSSTSQYTP 342 +SPS+ GYSP+ P YSP+S S Y+P Sbjct: 765 TYSPSSPGYSPTSPAYSPTSPS-YSP 789 Score = 64.3 bits (155), Expect = 7e-09 Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 4/82 (4%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPT--SPSYSPSS-PTYSPSSPYNSGTSPDYSPSSPQFSP 405 SPS SP + +SP ++SPSS P YSPSSP S +SP YSP+SP +SP Sbjct: 695 SPSYLLSPNLRLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSP 754 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S GYSP+ P YSPSS Y+P Sbjct: 755 TSPGYSPTSPTYSPSSPG-YSP 775 Score = 55.1 bits (131), Expect = 4e-06 Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Frame = -2 Query: 527 SPSY--SPT---SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYSP 366 SPSY SP SPS Y ++ +SP YSPSSP +SPS+ GYSP+ PGYSP Sbjct: 695 SPSYLLSPNLRLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSP 754 Query: 365 SSTSQYTPKTNDNKDDPG 312 +S + PG Sbjct: 755 TSPGYSPTSPTYSPSSPG 772 [5][TOP] >UniRef100_Q56Z04 DNA-directed RNA polymerase II largest chain (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q56Z04_ARATH Length = 99 Score = 143 bits (360), Expect = 1e-32 Identities = 68/90 (75%), Positives = 73/90 (81%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 R SP+SPYSPTSP+YSPTSPSYSPTSPSYSPSSPTYSPSSPY+SG SPDYSPS+ Sbjct: 5 RLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA------ 58 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 GYSP+ PGYSPSST QYTP D KD G Sbjct: 59 -GYSPTLPGYSPSSTGQYTPHEGDKKDKTG 87 [6][TOP] >UniRef100_A7NVN8 Chromosome chr18 scaffold_1, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7NVN8_VITVI Length = 89 Score = 136 bits (342), Expect = 1e-30 Identities = 65/82 (79%), Positives = 72/82 (87%) Frame = -2 Query: 551 TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGY 372 +S S SPTSPSYSPTSPSYSP+SPTYSP+SPYNSG SPDYSPSSPQ+SPS GYSPS PGY Sbjct: 9 SSYSCSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGY 68 Query: 371 SPSSTSQYTPKTNDNKDDPGTQ 306 SPSSTSQYTP+ + NKD+ Q Sbjct: 69 SPSSTSQYTPQMS-NKDNGSPQ 89 Score = 54.3 bits (129), Expect = 7e-06 Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Frame = -2 Query: 578 FSPSSPY-SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SPY S SP YSP+SP YSP S YSPS+P YSPSS S +PQ S Sbjct: 34 YSPTSPYNSGVSPDYSPSSPQYSP-SAGYSPSAPGYSPSST---------SQYTPQMSNK 83 Query: 401 TGYSP 387 SP Sbjct: 84 DNGSP 88 [7][TOP] >UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata RepID=Q6FQS9_CANGA Length = 1715 Score = 123 bits (309), Expect = 9e-27 Identities = 61/89 (68%), Positives = 71/89 (79%), Gaps = 2/89 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1686 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 S YSP+ P YSP S + Y+PK D K D Sbjct: 1687 SPSYSPTSPSYSPGSPT-YSPKDEDEKKD 1714 Score = 118 bits (296), Expect = 3e-25 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1543 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1602 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1603 SPSYSPTSPSYSPTSPS-YSP 1622 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1564 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1623 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1624 SPSYSPTSPSYSPTSPS-YSP 1643 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1585 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1645 SPSYSPTSPSYSPTSPS-YSP 1664 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1665 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1666 SPSYSPTSPSYSPTSPS-YSP 1685 Score = 110 bits (275), Expect = 8e-23 Identities = 55/78 (70%), Positives = 65/78 (83%), Gaps = 2/78 (2%) Frame = -2 Query: 569 SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396 SSP +SPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1539 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598 Query: 395 YSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1599 YSPTSPSYSPTSPS-YSP 1615 Score = 77.0 bits (188), Expect = 1e-12 Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 6/84 (7%) Frame = -2 Query: 575 SPSSPY--SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +P+SP +SP +SPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +S Sbjct: 1529 APASPGFGGVSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-- 1586 Query: 401 TGYSPSQP----GYSPSSTSQYTP 342 YSP+S S Y+P Sbjct: 1587 --------PTSPSYSPTSPS-YSP 1601 [8][TOP] >UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium discoideum RepID=RPB1_DICDI Length = 1727 Score = 122 bits (307), Expect = 2e-26 Identities = 62/90 (68%), Positives = 73/90 (81%), Gaps = 5/90 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP +SPS Sbjct: 1637 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPS 1696 Query: 401 T-GYSPSQPGYSPSS---TSQYTPKTNDNK 324 + YSPS P YSPSS T++Y + N+ K Sbjct: 1697 SPSYSPSSPSYSPSSPTFTNKYNYQPNNKK 1726 Score = 120 bits (302), Expect = 6e-26 Identities = 60/83 (72%), Positives = 70/83 (84%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1630 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1689 Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336 + YSPS P YSPSS S Y+P + Sbjct: 1690 SPSYSPSSPSYSPSSPS-YSPSS 1711 Score = 120 bits (300), Expect = 1e-25 Identities = 60/83 (72%), Positives = 69/83 (83%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1623 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1682 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P YSPSS S Y+P + Sbjct: 1683 SPSYSPSSPSYSPSSPS-YSPSS 1704 Score = 119 bits (298), Expect = 2e-25 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP+ S TSP YSP+SP +SP Sbjct: 1560 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPT 1619 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1620 SPSYSPTSPSYSPTSPS-YSP 1639 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1602 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1661 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1662 SPSYSPTSPSYSPTSPS-YSP 1681 Score = 115 bits (287), Expect = 3e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1581 YSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1640 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1641 SPSYSPTSPSYSPTSPS-YSP 1660 Score = 114 bits (284), Expect = 7e-24 Identities = 57/82 (69%), Positives = 67/82 (81%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++ P SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1545 QYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSP 1604 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1605 TSPSYSPTSPSYSPTSPS-YSP 1625 Score = 106 bits (264), Expect = 1e-21 Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 + S Y P SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1540 YGSSYQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1599 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1600 PFYSPTSPSYSPTSPS-YSP 1618 Score = 68.9 bits (167), Expect = 3e-10 Identities = 50/129 (38%), Positives = 60/129 (46%), Gaps = 52/129 (40%) Frame = -2 Query: 572 PSSPYSPTSPSYS----PTSPS-------------------------------------- 519 P +P S T PSYS T+P Sbjct: 1485 PDTPGSQT-PSYSYGDGSTTPFHNPYDAPLSPFNETFRGDFSPSAMNSPGYNANKSYGSS 1543 Query: 518 ---------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369 YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YS Sbjct: 1544 YQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYS 1603 Query: 368 PSSTSQYTP 342 P+S S Y+P Sbjct: 1604 PTSPS-YSP 1611 [9][TOP] >UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium gossypii RepID=RPB1_ASHGO Length = 1745 Score = 122 bits (307), Expect = 2e-26 Identities = 64/96 (66%), Positives = 75/96 (78%), Gaps = 6/96 (6%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDN----KDDPGT 309 S YSP+ P YSP S S Y+P N+N KD+ GT Sbjct: 1710 SPSYSPTSPQYSPRSPS-YSPSFNNNDKEQKDENGT 1744 Score = 118 bits (296), Expect = 3e-25 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1545 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1605 SPSYSPTSPSYSPTSPS-YSP 1624 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1647 SPSYSPTSPSYSPTSPS-YSP 1666 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 110 bits (275), Expect = 8e-23 Identities = 55/78 (70%), Positives = 65/78 (83%), Gaps = 2/78 (2%) Frame = -2 Query: 569 SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396 SSP +SPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1541 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1600 Query: 395 YSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1601 YSPTSPSYSPTSPS-YSP 1617 [10][TOP] >UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor RepID=C5YGY9_SORBI Length = 1857 Score = 121 bits (304), Expect = 3e-26 Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 6/90 (6%) Frame = -2 Query: 578 FSPSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS--GTSPDYSPSSP 417 +SPSSP YS TSPSYSPTSP+YSPTSPSYS SP+YSP+SP+N+ G SPDYSP+SP Sbjct: 1766 YSPSSPRMTPYSQTSPSYSPTSPTYSPTSPSYSQPSPSYSPTSPFNTSGGPSPDYSPTSP 1825 Query: 416 QFSPSTGYSPSQPGYSPSSTSQYTPKTNDN 327 +SPS YSP+ PGYSPSST Q K +++ Sbjct: 1826 NYSPSGSYSPTAPGYSPSSTGQGNDKDDES 1855 Score = 119 bits (299), Expect = 1e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1662 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1721 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ PGYSP+S S Y+P Sbjct: 1722 SPAYSPTSPGYSPTSPS-YSP 1741 Score = 116 bits (291), Expect = 1e-24 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1599 YSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1658 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1659 SPAYSPTSPAYSPTSPS-YSP 1678 Score = 116 bits (291), Expect = 1e-24 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1742 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y+PSS ++Y+P Sbjct: 1743 SPSYSPTSPSYNPSS-AKYSP 1762 Score = 116 bits (290), Expect = 1e-24 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPT 1679 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1680 SPSYSPTSPSYSPTSPS-YSP 1699 Score = 114 bits (284), Expect = 7e-24 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1592 YSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1652 SPVYSPTSPAYSPTSPA-YSP 1671 Score = 114 bits (284), Expect = 7e-24 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1648 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1707 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1708 SPSYSPTSPSYSPTSPA-YSP 1727 Score = 112 bits (281), Expect = 2e-23 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1641 YSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1701 SPSYSPTSPSYSPTSPS-YSP 1720 Score = 112 bits (279), Expect = 3e-23 Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 F+P YSP SPSYSP SPSYSPTSPSY+P SPTYSP+SP S TSP YSP+SP +SP S Sbjct: 1558 FTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTS 1617 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1618 PSYSPTSPSYSPTSPS-YSP 1636 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1585 YTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1645 SPSYSPTSPVYSPTSPA-YSP 1664 Score = 109 bits (273), Expect = 1e-22 Identities = 53/82 (64%), Positives = 65/82 (79%), Gaps = 3/82 (3%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+PSS ++SPS Sbjct: 1704 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPS 1763 Query: 401 TGYSPSQPGYSPSS--TSQYTP 342 YSPS P +P S + Y+P Sbjct: 1764 HAYSPSSPRMTPYSQTSPSYSP 1785 Score = 107 bits (268), Expect = 5e-22 Identities = 50/75 (66%), Positives = 63/75 (84%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP Y+P SP+YSPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1578 YSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637 Query: 404 STGYSPSQPGYSPSS 360 S YSP+ P YSP+S Sbjct: 1638 SPSYSPTSPSYSPTS 1652 Score = 107 bits (267), Expect = 7e-22 Identities = 54/75 (72%), Positives = 63/75 (84%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP S TSP YSP+SP ++PS Sbjct: 1697 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPS 1756 Query: 401 TG-YSPSQPGYSPSS 360 + YSPS YSPSS Sbjct: 1757 SAKYSPSH-AYSPSS 1770 Score = 104 bits (260), Expect = 4e-21 Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 9/90 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+ Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1728 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 SP +SP S YSP+ P YSP+S S Y P + Sbjct: 1729 SPGYSPTSPSYSPTSPSYSPTSPS-YNPSS 1757 Score = 100 bits (249), Expect = 8e-20 Identities = 49/80 (61%), Positives = 59/80 (73%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +SPSSP YSP SPSYSP SPSYSP+SP+Y+P SP S TSP+YSP+SP +SP S Sbjct: 1551 YSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTS 1610 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1611 PSYSPTSPSYSPTSPS-YSP 1629 Score = 89.4 bits (220), Expect = 2e-16 Identities = 51/89 (57%), Positives = 62/89 (69%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSP-SSP--YSPTSPSYSPTSP------SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 FSP SP YSP+S YSP+SP YSP SPSYSP+SP+YSP+SP + SP YSP Sbjct: 1535 FSPFPSPGGYSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSP 1594 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1595 TSPNYSPTSPTYSPTSPSYSPTSPS-YSP 1622 Score = 59.3 bits (142), Expect = 2e-07 Identities = 36/79 (45%), Positives = 45/79 (56%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 FSP + SP SP YSP+S YSPSSP ++P Y S SP YSP+SP Sbjct: 1526 FSPYVGHMAFSPFPSPGG--YSPSSGGYSPSSPVFTPEKGY-SPLSPSYSPASPS----- 1577 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P Y+P S + Y+P Sbjct: 1578 -YSPTSPSYTPGSPT-YSP 1594 Score = 58.9 bits (141), Expect = 3e-07 Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 7/87 (8%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGTSPDYSPSS 420 R SP + + SP + S P+ YSPSS YSPSSP S SP YSP+S Sbjct: 1516 RASPINTDASFSPYVGHMAFSPFPSPGGYSPSSGGYSPSSPVFTPEKGYSPLSPSYSPAS 1575 Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTP 342 P +SP S Y+P P YSP+S + Y+P Sbjct: 1576 PSYSPTSPSYTPGSPTYSPTSPN-YSP 1601 [11][TOP] >UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus RepID=B0XAQ9_CULQU Length = 1874 Score = 121 bits (304), Expect = 3e-26 Identities = 57/80 (71%), Positives = 68/80 (85%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP+SPYSPTSPSYSPTSP+YSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T Sbjct: 1648 YSPTSPYSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPAT 1707 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSPSS Y+P Sbjct: 1708 PSYSPTSPNYSPSS-PHYSP 1726 Score = 113 bits (283), Expect = 9e-24 Identities = 55/83 (66%), Positives = 70/83 (84%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSP+SPSYSP+SP+YSP+SP S TSP+Y+P++P +SP Sbjct: 1654 YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPT 1713 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P YSP+S S Y+P + Sbjct: 1714 SPNYSPSSPHYSPTSPS-YSPSS 1735 Score = 113 bits (282), Expect = 1e-23 Identities = 57/97 (58%), Positives = 67/97 (69%), Gaps = 18/97 (18%) Frame = -2 Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438 +SPSSP YSPTSPSYSPTSP+YSPTSP YSP+SP YSP+SP S TSP Sbjct: 1560 YSPSSPNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPNYSPTSPNYSPTSP 1619 Query: 437 DYSPSSPQFSPSTGYSPSQPGYSPSS-----TSQYTP 342 YSP+SP +SP+ Y+PS P YSP+S TS Y+P Sbjct: 1620 SYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPYSP 1656 Score = 112 bits (279), Expect = 3e-23 Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP+Y+P +PSYSP+SP YSPSSP+ S TSP YSPSSP++SP Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPT 1741 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y S QYTP Sbjct: 1742 SPSYSPTSPSYGGS--PQYTP 1760 Score = 111 bits (278), Expect = 4e-23 Identities = 54/81 (66%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SPSYSPTSPSYSP+SP+YSP+SP + +P YSP+SP +SPS Sbjct: 1661 YSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPS 1720 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 + YSP+ P YSPSS +Y+P Sbjct: 1721 SPHYSPTSPSYSPSS-PKYSP 1740 Score = 108 bits (271), Expect = 2e-22 Identities = 55/83 (66%), Positives = 68/83 (81%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSPSYSPTSP+YSP+SP+YSPSSP S TSP YSP+SP +SP Sbjct: 1641 YSPTSPSYSPTSP-YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPT 1699 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S Y+P+ P YSP+S + Y+P + Sbjct: 1700 SPNYTPATPSYSPTSPN-YSPSS 1721 Score = 107 bits (267), Expect = 7e-22 Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S +SP YSP+SP +SP Sbjct: 1634 YAPSSPAYSPTSPSYSPTSP-YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPT 1692 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P Y+P++ S N + P Sbjct: 1693 SPSYSPTSPNYTPATPSYSPTSPNYSPSSP 1722 Score = 105 bits (263), Expect = 2e-21 Identities = 53/81 (65%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP YSPTSPSYSP+SP YSP+SP+YSP+SP + G SP Y+P+SPQ+SP Sbjct: 1710 YSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSP-SYGGSPQYTPASPQYSPT 1768 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPSS Q++P Sbjct: 1769 SPKYSPTSPSYSPSS-PQHSP 1788 Score = 105 bits (262), Expect = 3e-21 Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+P +PSYSPTSP+YSP+SP YSP+SP+YSPSSP S TSP YSP+SP + S Sbjct: 1696 YSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYGGS 1755 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S +Y+P Sbjct: 1756 PQYTPASPQYSPTS-PKYSP 1774 Score = 103 bits (258), Expect = 7e-21 Identities = 58/95 (61%), Positives = 68/95 (71%), Gaps = 14/95 (14%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPT------SPSYSPTSPS------YSPSSPTYSPSSPYNSGTSP 438 +SP+SP YSPTSP YSPT SP+YSPTSPS YSP+SP+YSP+SP S TSP Sbjct: 1614 YSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPYSPTSPSYSPTSPAYSPTSP 1673 Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 YSPSSP +SP S YSP+ P YSP+S + YTP T Sbjct: 1674 SYSPSSPSYSPTSPSYSPTSPSYSPTSPN-YTPAT 1707 Score = 101 bits (252), Expect = 4e-20 Identities = 57/106 (53%), Positives = 70/106 (66%), Gaps = 15/106 (14%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSPSYSP+SP YSPTSPSYSP+SP+Y SP + SP YSP+SP++SP Sbjct: 1717 YSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYG-GSPQYTPASPQYSPTSPKYSPT 1775 Query: 404 STGYSPSQPGYSPSSTSQ--------YTPKT-----NDNKDDPGTQ 306 S YSPS P +SP S+ Y+P T N + PG+Q Sbjct: 1776 SPSYSPSSPQHSPGSSGSNFMVNSPTYSPTTARYSPNMSSYSPGSQ 1821 Score = 94.7 bits (234), Expect = 5e-18 Identities = 56/98 (57%), Positives = 68/98 (69%), Gaps = 18/98 (18%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSP-------------SYSPSSPTYSPSSPYNSGT 444 R+SP+SP YSPTSP+YSPTSPSYSPTSP +YSP+SP+YSP+SPY S T Sbjct: 1599 RYSPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPY-SPT 1657 Query: 443 SPDYSPSSPQFSPSTGYSPSQP----GYSPSSTSQYTP 342 SP YSP+SP +SP+ SPS YSP+S S Y+P Sbjct: 1658 SPSYSPTSPAYSPT---SPSYSPSSPSYSPTSPS-YSP 1691 Score = 92.0 bits (227), Expect = 3e-17 Identities = 52/96 (54%), Positives = 64/96 (66%), Gaps = 17/96 (17%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY------SPTSPSYSPSSPTYSPSSPYNSGTSPDYSP-- 426 +SPSSP YSPTSPSYSPTSPSY +P SP YSP+SP YSP+SP S +SP +SP Sbjct: 1731 YSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASPQYSPTSPKYSPTSPSYSPSSPQHSPGS 1790 Query: 425 -------SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 +SP +SP+T YSP+ YSP S +Y+P Sbjct: 1791 SGSNFMVNSPTYSPTTARYSPNMSSYSPGS-QKYSP 1825 Score = 90.1 bits (222), Expect = 1e-16 Identities = 56/123 (45%), Positives = 67/123 (54%), Gaps = 35/123 (28%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSP------------------------------SY 495 +++P+SP YSPTSP YSPTSPSYSP+SP SY Sbjct: 1757 QYTPASPQYSPTSPKYSPTSPSYSPSSPQHSPGSSGSNFMVNSPTYSPTTARYSPNMSSY 1816 Query: 494 SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPG---YSPSSTSQYTPKTNDN 327 SP S YSP+SP + TSP YSPSSP +SP+ GYSPS P YSP+S P D+ Sbjct: 1817 SPGSQKYSPTSPVYTPTSPHYSPSSPAYSPTGQGYSPSSPASPTYSPTS-----PSYEDS 1871 Query: 326 KDD 318 DD Sbjct: 1872 VDD 1874 Score = 89.7 bits (221), Expect = 1e-16 Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 12/92 (13%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSPS-----YSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP P SP+ SPSYSP+SP+Y+ SP YSP+SP+YSP+SP S TSP YSP+SP Sbjct: 1547 SPYFPSSPSASPSYSPSSPNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPN 1606 Query: 413 FSP-STGYSPSQPGYSPSS-----TSQYTPKT 336 +SP S YSP+ P YSP+S T+ Y P + Sbjct: 1607 YSPTSPNYSPTSPSYSPTSPLYSPTATYAPSS 1638 Score = 79.3 bits (194), Expect = 2e-13 Identities = 44/78 (56%), Positives = 52/78 (66%), Gaps = 1/78 (1%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396 P SP SP PS SP PS SPSYSPSSP Y+ +SP G SP YSP+SP +SP S Sbjct: 1536 PGSPSSP-GPSMSPYFPSSPSASPSYSPSSPNYAAASP--GGASPGYSPTSPSYSPTSPN 1592 Query: 395 YSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S + Y+P Sbjct: 1593 YSPTSPRYSPTSPN-YSP 1609 Score = 65.9 bits (159), Expect = 2e-09 Identities = 41/96 (42%), Positives = 53/96 (55%), Gaps = 17/96 (17%) Frame = -2 Query: 578 FSPSSPYS---PTSPSYSPT--------SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432 +SPS P S P PS+SP+ SPS+SP S S P+ SP P + SP Y Sbjct: 1501 WSPSGPPSGMTPGGPSFSPSAQSDASGMSPSWSPMPGSPSSPGPSMSPYFPSSPSASPSY 1560 Query: 431 SPSSPQFS------PSTGYSPSQPGYSPSSTSQYTP 342 SPSSP ++ S GYSP+ P YSP+S + Y+P Sbjct: 1561 SPSSPNYAAASPGGASPGYSPTSPSYSPTSPN-YSP 1595 [12][TOP] >UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis thaliana RepID=RPB1_ARATH Length = 1840 Score = 121 bits (304), Expect = 3e-26 Identities = 61/96 (63%), Positives = 72/96 (75%), Gaps = 6/96 (6%) Frame = -2 Query: 581 RFSPSSPYSPT----SPS--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 ++SPS YSP+ SP+ YSPTSP+YSPTSPSYSP+SP+YSPSSP S +SP S +S Sbjct: 1733 KYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 1792 Query: 419 PQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 P +SPS GYSP+ PGYSPSST QYTP D KD G Sbjct: 1793 PDYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTG 1828 Score = 117 bits (293), Expect = 6e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ PGYSP+S S Y+P Sbjct: 1696 SPAYSPTSPGYSPTSPS-YSP 1715 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1587 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1646 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1647 SPAYSPTSPAYSPTSPS-YSP 1666 Score = 117 bits (292), Expect = 8e-25 Identities = 56/77 (72%), Positives = 66/77 (85%), Gaps = 2/77 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1643 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1702 Query: 404 STGYSPSQPGYSPSSTS 354 S GYSP+ P YSP+S S Sbjct: 1703 SPGYSPTSPSYSPTSPS 1719 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1580 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1640 SPAYSPTSPAYSPTSPA-YSP 1659 Score = 116 bits (290), Expect = 1e-24 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 115 bits (289), Expect = 2e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1674 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694 Score = 115 bits (288), Expect = 2e-24 Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP Sbjct: 1545 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 1604 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1605 SPSYSPTSPSYSPTSPS-YSP 1624 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y P+ P Y+P S ++Y+P Sbjct: 1717 SPSYGPTSPSYNPQS-AKYSP 1736 Score = 112 bits (279), Expect = 3e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1573 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1633 SPSYSPTSPAYSPTSPA-YSP 1652 Score = 110 bits (276), Expect = 6e-23 Identities = 53/81 (65%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1566 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1626 SPSYSPTSPSYSPTSPA-YSP 1645 Score = 106 bits (265), Expect = 1e-21 Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 3/82 (3%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 FSPSS YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S +SP YSP+SP +SP Sbjct: 1537 FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 1596 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1597 TSPSYSPTSPSYSPTSPS-YSP 1617 Score = 105 bits (261), Expect = 3e-21 Identities = 55/100 (55%), Positives = 67/100 (67%), Gaps = 21/100 (21%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP S TSP Y P+SP + Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQ 1730 Query: 410 -----------------SPSTGYSPSQPGYSPSSTSQYTP 342 SP++ YSP+ P YSP+S S Y+P Sbjct: 1731 SAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-YSP 1769 Score = 87.4 bits (215), Expect = 7e-16 Identities = 47/81 (58%), Positives = 58/81 (71%), Gaps = 1/81 (1%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +FSP SPS +SP YSP+SP YSP+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1527 QFSPYVGGMAFSPS---SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 1583 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 + GYSP+ P YSP+S S Y+P Sbjct: 1584 SPGYSPTSPAYSPTSPS-YSP 1603 Score = 60.8 bits (146), Expect = 7e-08 Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 4/84 (4%) Frame = -2 Query: 575 SPSSPYSPTSPS-YSPT--SPSYSPTS-PSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 SP+ SP S + +SP ++SP+S P YSPSSP YSP TSP YSP+SP Sbjct: 1515 SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSP-------TSPGYSPTSP--- 1564 Query: 407 PSTGYSPSQPGYSPSSTSQYTPKT 336 GYSP+ PGYSP+S + Y+P + Sbjct: 1565 ---GYSPTSPGYSPTSPT-YSPSS 1584 Score = 54.7 bits (130), Expect = 5e-06 Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 7/92 (7%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG------TSPDYSPSSPQFSP 405 SP S T SP+Y SP+ S + + SPY G +SP YSPSSP +SP Sbjct: 1496 SPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSP 1554 Query: 404 -STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 S GYSP+ PGYSP+S + PG Sbjct: 1555 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG 1586 [13][TOP] >UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA Length = 1943 Score = 121 bits (303), Expect = 4e-26 Identities = 60/82 (73%), Positives = 70/82 (85%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1689 RYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSP 1748 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ PGYSPSS +Y+P Sbjct: 1749 TSPSYSPASPGYSPSS-PRYSP 1769 Score = 118 bits (295), Expect = 4e-25 Identities = 60/83 (72%), Positives = 69/83 (83%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSPSSP S TSP YSP+SP +SPS Sbjct: 1774 YSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPTYSPTSPAYSPS 1833 Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336 + YSPS P YSPSS QYTP + Sbjct: 1834 SPQYSPSSPQYSPSS-PQYTPSS 1855 Score = 117 bits (292), Expect = 8e-25 Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP+YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP YSPSSP++SP Sbjct: 1760 YSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPT 1819 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSPSS QY+P + Sbjct: 1820 SPTYSPTSPAYSPSS-PQYSPSS 1841 Score = 115 bits (288), Expect = 2e-24 Identities = 59/81 (72%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPSSP S TSP YSP+SP +SP Sbjct: 1725 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPT 1784 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1785 SPAYSPTSPTYSPTSPS-YSP 1804 Score = 113 bits (282), Expect = 1e-23 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSPSSP++SP Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPT 1770 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1771 SPAYSPTSPTYSPTSPA-YSP 1790 Score = 112 bits (279), Expect = 3e-23 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP SP YSP+SP YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP Sbjct: 1746 YSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPA 1805 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S GYSPS P YSP+S + Y+P Sbjct: 1806 SPGYSPSSPRYSPTSPT-YSP 1825 Score = 110 bits (276), Expect = 6e-23 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP Sbjct: 1718 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPT 1777 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1778 SPTYSPTSPAYSPTSPT-YSP 1797 Score = 108 bits (271), Expect = 2e-22 Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 1/82 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSP+SP YSPTSP+YSPTSP+YSPSSP YSPSSP S +SP Y+PSSP S Sbjct: 1802 YSPASPGYSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDAS 1861 Query: 401 TGYSPSQPGYSPSSTSQYTPKT 336 YSP+ P YSPSS +Y+P + Sbjct: 1862 PAYSPTSPQYSPSS-PRYSPSS 1882 Score = 108 bits (271), Expect = 2e-22 Identities = 58/93 (62%), Positives = 68/93 (73%), Gaps = 13/93 (13%) Frame = -2 Query: 581 RFSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS-----P 438 +++PSSP YSPTSP YSP+SP YSP+SP YSP+SP YSPSSP +GTS P Sbjct: 1850 QYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSP 1909 Query: 437 DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSPSSPQ+SPS+ YSPS P YSPSS QY+P Sbjct: 1910 QYSPSSPQYSPSSPQYSPSSPQYSPSS-PQYSP 1941 Score = 108 bits (269), Expect = 4e-22 Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 8/89 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GTSPDYSPSS 420 +SPSSP YSPTSP+YSPTSP+YSP+SP YSPSSP YSPSSP + SP YSP+S Sbjct: 1809 YSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTS 1868 Query: 419 PQFSPST-GYSPSQPGYSPSSTSQYTPKT 336 PQ+SPS+ YSPS P YSP+S QY+P + Sbjct: 1869 PQYSPSSPRYSPSSPQYSPTS-PQYSPSS 1896 Score = 106 bits (265), Expect = 1e-21 Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 SP+SPY +SP+Y SP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1671 SPASPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1730 Query: 398 GYSPSQPGYSPSSTSQYTP 342 GYSP+ P YSP+S S Y+P Sbjct: 1731 GYSPTSPSYSPTSPS-YSP 1748 Score = 102 bits (254), Expect = 2e-20 Identities = 59/102 (57%), Positives = 69/102 (67%), Gaps = 20/102 (19%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP- 426 ++SPSSP YSP+SP Y+P+SP+ YSPTSP YSPSSP YSPSSP S TSP YSP Sbjct: 1836 QYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPS 1895 Query: 425 -----------SSPQFSPST-GYSPSQPGYSPSSTSQYTPKT 336 SSPQ+SPS+ YSPS P YSPSS QY+P + Sbjct: 1896 SPGGAGTSYSRSSPQYSPSSPQYSPSSPQYSPSS-PQYSPSS 1936 Score = 102 bits (253), Expect = 3e-20 Identities = 55/94 (58%), Positives = 67/94 (71%), Gaps = 13/94 (13%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPT------SPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 +SPSSP YSP+SP YSP+SP Y+P+ SP+YSP+SP YSPSSP S +SP YSP+S Sbjct: 1830 YSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTS 1889 Query: 419 PQFSPS------TGYSPSQPGYSPSSTSQYTPKT 336 PQ+SPS T YS S P YSPSS QY+P + Sbjct: 1890 PQYSPSSPGGAGTSYSRSSPQYSPSS-PQYSPSS 1922 Score = 92.8 bits (229), Expect = 2e-17 Identities = 49/80 (61%), Positives = 60/80 (75%), Gaps = 4/80 (5%) Frame = -2 Query: 569 SSP-YSPTSPS--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SSP YSPTSP+ Y +SP+Y SP YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1663 SSPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1722 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ PGYSP+S S Y+P Sbjct: 1723 PSYSPTSPGYSPTSPS-YSP 1741 Score = 75.5 bits (184), Expect = 3e-12 Identities = 43/86 (50%), Positives = 52/86 (60%), Gaps = 8/86 (9%) Frame = -2 Query: 575 SPSSPYSPTSPSYSP-----TSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSP 417 S + YSP + Y +SP YSPTSP+ Y SSP Y SP S TSP YSP+SP Sbjct: 1643 SGAGAYSPAASDYGSGLEGLSSPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSP 1702 Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S YSP+ P YSP+S S Y+P Sbjct: 1703 SYSPTSPSYSPTSPSYSPTSPS-YSP 1727 [14][TOP] >UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis RepID=A3GID7_PICST Length = 1739 Score = 120 bits (302), Expect = 6e-26 Identities = 62/98 (63%), Positives = 74/98 (75%), Gaps = 11/98 (11%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1700 Query: 404 STGYSPSQPGYSPSST---------SQYTPKTNDNKDD 318 S YSP+ P YSP+S S +PKT D K++ Sbjct: 1701 SPSYSPTSPQYSPTSPQYSPGSPEYSPNSPKTEDKKNE 1738 Score = 119 bits (297), Expect = 2e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1693 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1694 SPQYSPTSPSYSPTS-PQYSP 1713 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1673 SPSYSPTSPSYSPTS-PQYSP 1692 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1571 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1652 SPSYSPTSPSYSPTSPS-YSP 1671 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1564 YSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1623 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1624 SPSYSPTSPSYSPTSPS-YSP 1643 Score = 112 bits (280), Expect = 2e-23 Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1547 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1606 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1607 SPTSPSYSPTSPS-YSP 1622 Score = 108 bits (269), Expect = 4e-22 Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 S S Y TSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1538 SVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1597 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1598 SYSPTSPSYSPTSPS-YSP 1615 Score = 89.0 bits (219), Expect = 2e-16 Identities = 53/94 (56%), Positives = 62/94 (65%), Gaps = 17/94 (18%) Frame = -2 Query: 572 PSSPYSPTSP-SYSP---------------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 P+SP S TSP SY TSPSYSPTSPSYSP+SP+YSP+SP S TS Sbjct: 1517 PTSP-SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1575 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1576 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1608 Score = 88.6 bits (218), Expect = 3e-16 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 4/82 (4%) Frame = -2 Query: 575 SPSSPYS--PTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 S +SP+S TSPS+ + SP Y TSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1521 SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSP 1580 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1581 TSPSYSPTSPSYSPTSPS-YSP 1601 Score = 62.8 bits (151), Expect = 2e-08 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 3/73 (4%) Frame = -2 Query: 551 TSPSYSPTSPSYSPTSP-SYSPSSPTYSPS-SPYNSGTSPDYSPSSPQFSP-STGYSPSQ 381 TS PTSPS TSP SY +SP++ S SP GTSP YSP+SP +SP S YSP+ Sbjct: 1511 TSYGGQPTSPS--ATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTS 1568 Query: 380 PGYSPSSTSQYTP 342 P YSP+S + Y+P Sbjct: 1569 PSYSPTSPA-YSP 1580 [15][TOP] >UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1 Tax=Pichia guilliermondii RepID=RPB1_PICGU Length = 1579 Score = 120 bits (302), Expect = 6e-26 Identities = 61/94 (64%), Positives = 73/94 (77%), Gaps = 8/94 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1483 YSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1542 Query: 404 STGYSPSQPGYSPSS------TSQYTPKTNDNKD 321 S YSP+ P YSP+S + Y+P ND+KD Sbjct: 1543 SPAYSPTSPQYSPNSPQYSPRSPLYSPDQNDDKD 1576 Score = 118 bits (295), Expect = 4e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1462 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPT 1521 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1522 SPSYSPTSPSYSPTS-PQYSP 1541 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1399 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1458 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1459 SPSYSPTSPSYSPTSPS-YSP 1478 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1420 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1479 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1480 SPSYSPTSPSYSPTSPS-YSP 1499 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+ Sbjct: 1441 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1500 Query: 401 TG-YSPSQPGYSPSSTSQYTP 342 + YSP+ P YSP+S S Y+P Sbjct: 1501 SPLYSPTSPSYSPTSPS-YSP 1520 Score = 112 bits (281), Expect = 2e-23 Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1382 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1441 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1442 SPTSPSYSPTSPS-YSP 1457 Score = 106 bits (264), Expect = 1e-21 Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S Y TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1375 SPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1434 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1435 SPTSPSYSPTSPS-YSP 1450 Score = 98.6 bits (244), Expect = 3e-19 Identities = 51/88 (57%), Positives = 61/88 (69%), Gaps = 10/88 (11%) Frame = -2 Query: 575 SPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 SP+SP Y SP Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+ Sbjct: 1357 SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1416 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1417 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1443 Score = 88.2 bits (217), Expect = 4e-16 Identities = 47/79 (59%), Positives = 56/79 (70%), Gaps = 2/79 (2%) Frame = -2 Query: 572 PSSPYSPTSP-SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 P SP SPTSP +Y TSP+Y SP Y +SPTYSP+SP S TSP YSP+SP +SP S Sbjct: 1353 PGSP-SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 1411 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1412 SYSPTSPSYSPTSPS-YSP 1429 [16][TOP] >UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1 isoform 2 n=1 Tax=Hydra magnipapillata RepID=UPI00019270E9 Length = 2014 Score = 120 bits (301), Expect = 8e-26 Identities = 61/81 (75%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSPSSPQ+SP Sbjct: 1699 YSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP P YSPSS S Y+P Sbjct: 1759 SPAYSPQSPSYSPSSPS-YSP 1778 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1615 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1682 SPSYSPTSPSYSPTSPS-YSP 1701 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1724 SPSYSPTSPKYSPTSPS-YSP 1743 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+ Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702 Query: 401 TG-YSPSQPGYSPSSTSQYTP 342 + YSP+ P YSP+S S Y+P Sbjct: 1703 SPIYSPTSPSYSPTSPS-YSP 1722 Score = 115 bits (289), Expect = 2e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1601 YSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1661 SPSYSPTSPSYSPTSPS-YSP 1680 Score = 115 bits (289), Expect = 2e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 115 bits (288), Expect = 2e-24 Identities = 57/84 (67%), Positives = 69/84 (82%), Gaps = 2/84 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSPSYSP+SP YSPTSP+YSP SP+YSPSSP S TSP YSP+SP++SP Sbjct: 1733 KYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSP 1792 Query: 404 -STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSPSS S Y+P + Sbjct: 1793 TSPKYSPTSPSYSPSSPS-YSPSS 1815 Score = 115 bits (287), Expect = 3e-24 Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1692 YSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPS 1751 Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336 + YSP+ P YSP S S Y+P + Sbjct: 1752 SPQYSPTSPAYSPQSPS-YSPSS 1773 Score = 114 bits (286), Expect = 4e-24 Identities = 57/83 (68%), Positives = 69/83 (83%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPT 1744 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P YSP+S + Y+P++ Sbjct: 1745 SPSYSPSSPQYSPTSPA-YSPQS 1766 Score = 114 bits (286), Expect = 4e-24 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSPSYSPSSP+YSPSSP S TSP YSP+SP +SP Sbjct: 1776 YSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPT 1835 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1836 SPAYSPTSPAYSPTSPA-YSP 1855 Score = 113 bits (282), Expect = 1e-23 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP YSPTSP+YSP SPSYSPSSP+YSP+SP S TSP YSP+SP++SP Sbjct: 1741 YSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPT 1800 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSPS P YSPSS + Y+P Sbjct: 1801 SPSYSPSSPSYSPSSPN-YSP 1820 Score = 113 bits (282), Expect = 1e-23 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SPSSP YSPTSP+YSP SPSYSP+SPSYSP+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1748 YSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPS 1807 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 + YSPS P YSP+S + Y+P Sbjct: 1808 SPSYSPSSPNYSPTSPT-YSP 1827 Score = 112 bits (280), Expect = 2e-23 Identities = 57/80 (71%), Positives = 64/80 (80%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SPSSP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S Sbjct: 1588 SPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTS 1647 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1648 PSYSPTSPSYSPTSPS-YSP 1666 Score = 112 bits (280), Expect = 2e-23 Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSPSSP +SP Sbjct: 1720 YSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPT 1779 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1780 SPKYSPTSPKYSPTS-PKYSP 1799 Score = 111 bits (278), Expect = 4e-23 Identities = 55/82 (67%), Positives = 67/82 (81%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSP SPSYSP+SPSYSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP Sbjct: 1754 QYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSP 1813 Query: 404 ST-GYSPSQPGYSPSSTSQYTP 342 S+ YSP+ P YSP+S + Y+P Sbjct: 1814 SSPNYSPTSPTYSPTSPT-YSP 1834 Score = 110 bits (276), Expect = 6e-23 Identities = 54/82 (65%), Positives = 69/82 (84%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSP+SPSYSP+SP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP Sbjct: 1796 KYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSP 1855 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1856 TSPVYSPTSPAYSPTS-PKYSP 1876 Score = 110 bits (276), Expect = 6e-23 Identities = 59/108 (54%), Positives = 71/108 (65%), Gaps = 29/108 (26%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP++SP Sbjct: 1818 YSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPT 1877 Query: 404 ---------------------STGYSPSQPGYSPSS------TSQYTP 342 STGYSP+ P YSPSS T QY+P Sbjct: 1878 SPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSP 1925 Score = 107 bits (266), Expect = 9e-22 Identities = 54/97 (55%), Positives = 63/97 (64%), Gaps = 17/97 (17%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP+YSPTS YSPTSP YSPSSP YSP++P S TSP YSP+SP +SP Sbjct: 1880 KYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSP 1939 Query: 404 ST----------------GYSPSQPGYSPSSTSQYTP 342 ST YSP P YSP T Y+P Sbjct: 1940 STPTDKSVGSINYSPLEPDYSPGTPTYSPDGTPTYSP 1976 Score = 106 bits (265), Expect = 1e-21 Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F+P SP SP+SP YSPTSP YSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1580 FNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPT 1639 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1640 SPSYSPTSPSYSPTSPS-YSP 1659 Score = 103 bits (258), Expect = 7e-21 Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+ Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPT 1709 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S YSP+ P YSP+S +Y+P Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTS-PKYSP 1736 Score = 103 bits (258), Expect = 7e-21 Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSPTSP YSPTSPSYSP+SP+YSPSSP S TSP YSP Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQ 1765 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ YSP+ P YSP+S +Y+P Sbjct: 1766 SPSYSPSSPSYSPTSPKYSPTS-PKYSP 1792 Score = 103 bits (257), Expect = 1e-20 Identities = 56/99 (56%), Positives = 69/99 (69%), Gaps = 9/99 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP+YSP+S YSP+SP S +SP YSP++PQ+SP Sbjct: 1867 YSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPT 1926 Query: 404 STGYSPSQPGYSPSSTS-------QYTPKTNDNKDDPGT 309 S YSP+ P YSPS+ + Y+P D PGT Sbjct: 1927 SPKYSPASPTYSPSTPTDKSVGSINYSPLEPDY--SPGT 1963 Score = 101 bits (251), Expect = 5e-20 Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP ++P SP+ SP+SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1573 YSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPT 1632 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1633 SPSYSPTSPSYSPTSPS-YSP 1652 Score = 96.3 bits (238), Expect = 2e-18 Identities = 49/86 (56%), Positives = 62/86 (72%), Gaps = 7/86 (8%) Frame = -2 Query: 578 FSPSSPYSP------TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 FSP+ +SP + PSYSP SP+++P SP+ SPSSP YSP+SP S TSP YSP+SP Sbjct: 1554 FSPAGGFSPAWSPQDSIPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSP 1613 Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S GYSP+ P YSP+S S Y+P Sbjct: 1614 SYSPTSPGYSPTSPSYSPTSPS-YSP 1638 Score = 82.4 bits (202), Expect = 2e-14 Identities = 47/99 (47%), Positives = 57/99 (57%), Gaps = 24/99 (24%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP----------------YNS 450 +SP+SP YSP+SP YSPT+P YSPTSP YSP+SPTYSPS+P Y+ Sbjct: 1902 YSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSP 1961 Query: 449 GT-------SPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 354 GT +P YSP FS + + S YSPSS S Sbjct: 1962 GTPTYSPDGTPTYSPDGRGFSGTAAKNISPMDYSPSSPS 2000 Score = 54.7 bits (130), Expect = 5e-06 Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 9/94 (9%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPS----YSPT---SPSYSP--SSPTYSPSSPYNSGTSPDYSPSSPQ 414 S +P + S+SP++ S +SP SP++SP S P+YSP+SP + SP SPSSP Sbjct: 1534 SGMTPGAASFSPSAHSDASGFSPAGGFSPAWSPQDSIPSYSPNSPAFNPQSPAMSPSSP- 1592 Query: 413 FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 GYSP+ P YSP+S + + PG Sbjct: 1593 -----GYSPTSPLYSPTSPGYSPTSPSYSPTSPG 1621 [17][TOP] >UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1 isoform 1 n=1 Tax=Hydra magnipapillata RepID=UPI00019270BB Length = 2041 Score = 120 bits (301), Expect = 8e-26 Identities = 61/81 (75%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSPSSPQ+SP Sbjct: 1726 YSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPT 1785 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP P YSPSS S Y+P Sbjct: 1786 SPAYSPQSPSYSPSSPS-YSP 1805 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1642 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSP 1721 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1709 SPSYSPTSPSYSPTSPS-YSP 1728 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPT 1750 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1751 SPSYSPTSPKYSPTSPS-YSP 1770 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+ Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729 Query: 401 TG-YSPSQPGYSPSSTSQYTP 342 + YSP+ P YSP+S S Y+P Sbjct: 1730 SPIYSPTSPSYSPTSPS-YSP 1749 Score = 115 bits (289), Expect = 2e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1628 YSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707 Score = 115 bits (289), Expect = 2e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1635 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714 Score = 115 bits (288), Expect = 2e-24 Identities = 57/84 (67%), Positives = 69/84 (82%), Gaps = 2/84 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSPSYSP+SP YSPTSP+YSP SP+YSPSSP S TSP YSP+SP++SP Sbjct: 1760 KYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSP 1819 Query: 404 -STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSPSS S Y+P + Sbjct: 1820 TSPKYSPTSPSYSPSSPS-YSPSS 1842 Score = 115 bits (287), Expect = 3e-24 Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1719 YSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPS 1778 Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336 + YSP+ P YSP S S Y+P + Sbjct: 1779 SPQYSPTSPAYSPQSPS-YSPSS 1800 Score = 114 bits (286), Expect = 4e-24 Identities = 57/83 (68%), Positives = 69/83 (83%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPT 1771 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P YSP+S + Y+P++ Sbjct: 1772 SPSYSPSSPQYSPTSPA-YSPQS 1793 Score = 114 bits (286), Expect = 4e-24 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSPSYSPSSP+YSPSSP S TSP YSP+SP +SP Sbjct: 1803 YSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPT 1862 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1863 SPAYSPTSPAYSPTSPA-YSP 1882 Score = 113 bits (282), Expect = 1e-23 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP YSPTSP+YSP SPSYSPSSP+YSP+SP S TSP YSP+SP++SP Sbjct: 1768 YSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPT 1827 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSPS P YSPSS + Y+P Sbjct: 1828 SPSYSPSSPSYSPSSPN-YSP 1847 Score = 113 bits (282), Expect = 1e-23 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SPSSP YSPTSP+YSP SPSYSP+SPSYSP+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1775 YSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPS 1834 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 + YSPS P YSP+S + Y+P Sbjct: 1835 SPSYSPSSPNYSPTSPT-YSP 1854 Score = 112 bits (280), Expect = 2e-23 Identities = 57/80 (71%), Positives = 64/80 (80%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SPSSP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S Sbjct: 1615 SPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTS 1674 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1675 PSYSPTSPSYSPTSPS-YSP 1693 Score = 112 bits (280), Expect = 2e-23 Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSPSSP +SP Sbjct: 1747 YSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPT 1806 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1807 SPKYSPTSPKYSPTS-PKYSP 1826 Score = 111 bits (278), Expect = 4e-23 Identities = 55/82 (67%), Positives = 67/82 (81%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSP SPSYSP+SPSYSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP Sbjct: 1781 QYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSP 1840 Query: 404 ST-GYSPSQPGYSPSSTSQYTP 342 S+ YSP+ P YSP+S + Y+P Sbjct: 1841 SSPNYSPTSPTYSPTSPT-YSP 1861 Score = 110 bits (276), Expect = 6e-23 Identities = 54/82 (65%), Positives = 69/82 (84%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSP+SPSYSP+SP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP Sbjct: 1823 KYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSP 1882 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1883 TSPVYSPTSPAYSPTS-PKYSP 1903 Score = 110 bits (276), Expect = 6e-23 Identities = 59/108 (54%), Positives = 71/108 (65%), Gaps = 29/108 (26%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP++SP Sbjct: 1845 YSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPT 1904 Query: 404 ---------------------STGYSPSQPGYSPSS------TSQYTP 342 STGYSP+ P YSPSS T QY+P Sbjct: 1905 SPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSP 1952 Score = 107 bits (266), Expect = 9e-22 Identities = 54/97 (55%), Positives = 63/97 (64%), Gaps = 17/97 (17%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP+YSPTS YSPTSP YSPSSP YSP++P S TSP YSP+SP +SP Sbjct: 1907 KYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSP 1966 Query: 404 ST----------------GYSPSQPGYSPSSTSQYTP 342 ST YSP P YSP T Y+P Sbjct: 1967 STPTDKSVGSINYSPLEPDYSPGTPTYSPDGTPTYSP 2003 Score = 106 bits (265), Expect = 1e-21 Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F+P SP SP+SP YSPTSP YSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1607 FNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPT 1666 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686 Score = 103 bits (258), Expect = 7e-21 Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+ Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPT 1736 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S YSP+ P YSP+S +Y+P Sbjct: 1737 SPSYSPTSPSYSPTSPSYSPTS-PKYSP 1763 Score = 103 bits (258), Expect = 7e-21 Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSPTSP YSPTSPSYSP+SP+YSPSSP S TSP YSP Sbjct: 1733 YSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQ 1792 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ YSP+ P YSP+S +Y+P Sbjct: 1793 SPSYSPSSPSYSPTSPKYSPTS-PKYSP 1819 Score = 103 bits (257), Expect = 1e-20 Identities = 56/99 (56%), Positives = 69/99 (69%), Gaps = 9/99 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP+YSP+S YSP+SP S +SP YSP++PQ+SP Sbjct: 1894 YSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPT 1953 Query: 404 STGYSPSQPGYSPSSTS-------QYTPKTNDNKDDPGT 309 S YSP+ P YSPS+ + Y+P D PGT Sbjct: 1954 SPKYSPASPTYSPSTPTDKSVGSINYSPLEPDY--SPGT 1990 Score = 101 bits (251), Expect = 5e-20 Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP ++P SP+ SP+SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1600 YSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPT 1659 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1660 SPSYSPTSPSYSPTSPS-YSP 1679 Score = 97.4 bits (241), Expect = 7e-19 Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 7/83 (8%) Frame = -2 Query: 569 SSPYSPT------SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 SSPY P+ SPSYSP SP+++P SP+ SPSSP YSP+SP S TSP YSP+SP +S Sbjct: 1584 SSPYIPSPSRNVMSPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYS 1643 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S GYSP+ P YSP+S S Y+P Sbjct: 1644 PTSPGYSPTSPSYSPTSPS-YSP 1665 Score = 95.5 bits (236), Expect = 3e-18 Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YSP SP+++P SP+ SP+SP YSP+SP YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1597 SPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSY 1656 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1657 SPTSPSYSPTSPS-YSP 1672 Score = 82.4 bits (202), Expect = 2e-14 Identities = 47/99 (47%), Positives = 57/99 (57%), Gaps = 24/99 (24%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP----------------YNS 450 +SP+SP YSP+SP YSPT+P YSPTSP YSP+SPTYSPS+P Y+ Sbjct: 1929 YSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSP 1988 Query: 449 GT-------SPDYSPSSPQFSPSTGYSPSQPGYSPSSTS 354 GT +P YSP FS + + S YSPSS S Sbjct: 1989 GTPTYSPDGTPTYSPDGRGFSGTAAKNISPMDYSPSSPS 2027 Score = 58.9 bits (141), Expect = 3e-07 Identities = 41/94 (43%), Positives = 51/94 (54%), Gaps = 5/94 (5%) Frame = -2 Query: 578 FSPSSPYSPT-SP--SYSPTSPSYSP--TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 FSP+ +SP SP S S SP SP SPS + SP+YSP+SP + SP SPSSP Sbjct: 1561 FSPAGGFSPAWSPQDSMSLGSPDSSPYIPSPSRNVMSPSYSPNSPAFNPQSPAMSPSSP- 1619 Query: 413 FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 GYSP+ P YSP+S + + PG Sbjct: 1620 -----GYSPTSPLYSPTSPGYSPTSPSYSPTSPG 1648 [18][TOP] >UniRef100_UPI000051AA8E PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) n=1 Tax=Apis mellifera RepID=UPI000051AA8E Length = 452 Score = 120 bits (301), Expect = 8e-26 Identities = 61/81 (75%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P+SP S TSP YSPSSPQ+SP Sbjct: 251 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPA 310 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSPS P YSP+S S Y+P Sbjct: 311 SPSYSPSSPKYSPTSPS-YSP 330 Score = 119 bits (297), Expect = 2e-25 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 209 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 268 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPSS + YTP Sbjct: 269 SPSYSPTSPSYSPSSPN-YTP 288 Score = 117 bits (294), Expect = 5e-25 Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 202 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 261 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP+S S Y+P + Sbjct: 262 SPSYSPTSPSYSPTSPS-YSPSS 283 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 160 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 219 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 220 SPSYSPTSPSYSPTSPS-YSP 239 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 167 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 226 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 227 SPSYSPTSPSYSPTSPS-YSP 246 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 188 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 247 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 248 SPSYSPTSPSYSPTSPS-YSP 267 Score = 117 bits (293), Expect = 6e-25 Identities = 57/83 (68%), Positives = 70/83 (84%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 223 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 282 Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336 + Y+P+ P YSP+S S Y+P + Sbjct: 283 SPNYTPASPSYSPTSPS-YSPSS 304 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 153 YSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 212 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 213 SPSYSPTSPSYSPTSPS-YSP 232 Score = 114 bits (284), Expect = 7e-24 Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +PSSP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 147 TPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 206 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 207 PSYSPTSPSYSPTSPS-YSP 225 Score = 110 bits (276), Expect = 6e-23 Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 9/90 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--S 408 +SPSSP YSPTSPSYSPTSPS++ TSP Y+P+SPTYSP+SP S TSP YSPSSPQ S Sbjct: 314 YSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPTYSPTSPTYSPTSPSYSPSSPQHTAS 373 Query: 407 PSTGYSPSQPGYSPSS------TSQYTPKT 336 ST YSPS P YSP+S + QY+P + Sbjct: 374 GSTRYSPSSPNYSPTSPTYSPTSPQYSPSS 403 Score = 104 bits (260), Expect = 4e-21 Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 9/90 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTSPSYSPTSPSYSPTSPSYS P+SP+YSP+SP S +SP+Y+P+ Sbjct: 230 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPA 289 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 SP +SP S YSPS P YSP+S S Y+P + Sbjct: 290 SPSYSPTSPSYSPSSPQYSPASPS-YSPSS 318 Score = 104 bits (259), Expect = 6e-21 Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 10/88 (11%) Frame = -2 Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 +SPSSP YSP+SP+YSPTSP+YSPTSP YSPSS YSP+SP + TSP YSP Sbjct: 363 YSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPTYTPTSPSYSP 422 Query: 425 SSPQFSPST-GYSPSQPGYSPSSTSQYT 345 +SP +SP GYSP+ P YSP+S + T Sbjct: 423 TSPTYSPPVPGYSPTSPTYSPASPAYET 450 Score = 103 bits (258), Expect = 7e-21 Identities = 50/77 (64%), Positives = 61/77 (79%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YSPTSP+Y PTSPS +P+SP+YSP+SPTYSP+SP S TSP YSP+SP +SP S Y Sbjct: 129 SPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 188 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 189 SPTSPSYSPTSPS-YSP 204 Score = 103 bits (257), Expect = 1e-20 Identities = 52/88 (59%), Positives = 66/88 (75%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP+Y+P SPSYSPTSPSYSPSSP YSP+SP S +SP YSP+SP +SP Sbjct: 272 YSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPT 331 Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 332 SPSFAGTSPQYTPASPTYSPTSPT-YSP 358 Score = 101 bits (252), Expect = 4e-20 Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 1/78 (1%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396 P SP SPSYSPTSP+Y PTSPS +PSSP YSP+SP S TSP+YSP+SP +SP S Sbjct: 121 PMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPS 180 Query: 395 YSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 181 YSPTSPSYSPTSPS-YSP 197 Score = 101 bits (251), Expect = 5e-20 Identities = 53/90 (58%), Positives = 67/90 (74%), Gaps = 10/90 (11%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPS--------YSPSSPTYSPSSPYNSGTSPDYS 429 +++P+SP YSPTSP+YSPTSPSYSP+SP YSPSSP YSP+SP S TSP YS Sbjct: 341 QYTPASPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYS 400 Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 PSS ++SP S Y+P+ P YSP+S + Y+P Sbjct: 401 PSSTKYSPTSPTYTPTSPSYSPTSPT-YSP 429 Score = 98.6 bits (244), Expect = 3e-19 Identities = 53/97 (54%), Positives = 70/97 (72%), Gaps = 16/97 (16%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTSPSYSP+SP YSP SPSYS P+SP+YSP+SP +GTSP Y+P+ Sbjct: 286 YTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPA 345 Query: 422 SPQFSP-STGYSPSQPGYSPSS-------TSQYTPKT 336 SP +SP S YSP+ P YSPSS +++Y+P + Sbjct: 346 SPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSS 382 Score = 58.2 bits (139), Expect = 5e-07 Identities = 42/86 (48%), Positives = 51/86 (59%), Gaps = 7/86 (8%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSY-SPTSPSYSPSSPTYSPS---SPYNSGTSPDYSPSSP 417 FSPS S S SP+YS SP SP SP S S SP+ SP S TSP Y P+SP Sbjct: 85 FSPSGASDASGLSPAYSAYSPQPGSPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSP 144 Query: 416 QFSPST-GYSPSQPGYSPSSTSQYTP 342 +PS+ YSP+ P YSP+S + Y+P Sbjct: 145 SITPSSPNYSPTSPTYSPTSPN-YSP 169 [19][TOP] >UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica RepID=Q6CBQ3_YARLI Length = 1750 Score = 120 bits (301), Expect = 8e-26 Identities = 61/94 (64%), Positives = 74/94 (78%), Gaps = 8/94 (8%) Frame = -2 Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSS 420 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSPSSP +N+G S YSP+S Sbjct: 1654 YSPTSPSYSPTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKFNAGASTSYSPTS 1713 Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKD 321 P +SP S YSP+ P YSP+S S Y+P + D+KD Sbjct: 1714 PSYSPTSPSYSPTSPSYSPTSPS-YSPGSGDSKD 1746 Score = 119 bits (297), Expect = 2e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1591 YSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S +P Sbjct: 1651 SPSYSPTSPSYSPTSYSPTSP 1671 Score = 115 bits (288), Expect = 2e-24 Identities = 59/88 (67%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 FSPSSP YSP+SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+ Sbjct: 1577 FSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1663 Score = 110 bits (275), Expect = 8e-23 Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 7/80 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YN----SGTSPDYSPSSP 417 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP Y+ S TSP YSP+SP Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSYSPTSPSYSPTSP 1678 Query: 416 QFSP-STGYSPSQPGYSPSS 360 +SP S YSP+ P YSPSS Sbjct: 1679 SYSPTSPSYSPTSPSYSPSS 1698 Score = 103 bits (257), Expect = 1e-20 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP----------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SPSSP +SP+SP+++ TSPSYSP+SPSYSP+SP+YSP+SP S TSP YS Sbjct: 1561 YSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYS 1620 Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1649 Score = 100 bits (249), Expect = 8e-20 Identities = 58/95 (61%), Positives = 69/95 (72%), Gaps = 14/95 (14%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSP----- 438 +SP+SP YSPTSPSYSPTSPSYSPTSPSYS P+SP+YSP+SP S TSP Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1664 Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 YSP+SP +SP S YSP+ P YSP+S S Y+P + Sbjct: 1665 SYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPSS 1698 Score = 90.1 bits (222), Expect = 1e-16 Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSP---------SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 F +SP ++ TSPSYSP+SP S+SP+SP+++ +SP+YSPSSP S TSP YS Sbjct: 1547 FGAASPGFAATSPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYS 1606 Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1607 PTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635 Score = 89.7 bits (221), Expect = 1e-16 Identities = 51/106 (48%), Positives = 64/106 (60%), Gaps = 27/106 (25%) Frame = -2 Query: 578 FSPSSPYSP---TSPSYSPTSPSYSP-----------------------TSPSYSPSSPT 477 ++P+SP+S SP ++ TSPSYSP TSPSYSPSSP+ Sbjct: 1538 YTPTSPFSSFGAASPGFAATSPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPS 1597 Query: 476 YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1642 [20][TOP] >UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis RepID=A7S8F9_NEMVE Length = 1929 Score = 120 bits (300), Expect = 1e-25 Identities = 58/83 (69%), Positives = 68/83 (81%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1765 Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336 + YSPS P YSP S S +P + Sbjct: 1766 SPSYSPSSPSYSPQSPSYASPSS 1788 Score = 117 bits (294), Expect = 5e-25 Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP+S S Y+P + Sbjct: 1745 SPSYSPTSPSYSPTSPS-YSPSS 1766 Score = 117 bits (294), Expect = 5e-25 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP +SPS Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPS 1772 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 + YSP P Y+ S+ +Y+P Sbjct: 1773 SPSYSPQSPSYASPSSPKYSP 1793 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1703 SPSYSPTSPSYSPTSPS-YSP 1722 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743 Score = 116 bits (291), Expect = 1e-24 Identities = 57/79 (72%), Positives = 65/79 (82%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 SPSS YSP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1624 SPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1684 SYSPTSPSYSPTSPS-YSP 1701 Score = 115 bits (288), Expect = 2e-24 Identities = 58/80 (72%), Positives = 65/80 (81%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SPSSP YSP SPSYSPTSP YSPTSP+YSP+SP+YSPSSP S TSP Y+P+SP +SP S Sbjct: 1785 SPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPAS 1844 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSPS P YSPSS +YTP Sbjct: 1845 PSYSPSSPSYSPSS-PRYTP 1863 Score = 112 bits (279), Expect = 3e-23 Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSPSSP +SP Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQ 1779 Query: 404 --------STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1780 SPSYASPSSPKYSPASPSYSPTS-PKYSP 1807 Score = 111 bits (277), Expect = 5e-23 Identities = 60/96 (62%), Positives = 69/96 (71%), Gaps = 17/96 (17%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP--------YNSGTSPDYSP 426 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP+YSPSSP Y S +SP YSP Sbjct: 1734 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSSPKYSP 1793 Query: 425 SSPQFSP--------STGYSPSQPGYSPSSTSQYTP 342 +SP +SP S YSP+ P YSPSS +Y+P Sbjct: 1794 ASPSYSPTSPKYSPTSPNYSPASPSYSPSS-PKYSP 1828 Score = 110 bits (275), Expect = 8e-23 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP YSPTSPSY+P SPSYSP+SP+YSPSSP S +SP Y+P+SPQ+SP Sbjct: 1812 YSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPT 1871 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T YTP Sbjct: 1872 SPKYSPASPNYSP-TTPSYTP 1891 Score = 110 bits (275), Expect = 8e-23 Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSPSY+P SPSYSP SPSYSPSSP+YSPSSP + TSP YSP+SP++SP Sbjct: 1819 YSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPA 1878 Query: 404 STGYSPSQPGYSPSS 360 S YSP+ P Y+P S Sbjct: 1879 SPNYSPTTPSYTPMS 1893 Score = 109 bits (273), Expect = 1e-22 Identities = 53/84 (63%), Positives = 69/84 (82%), Gaps = 2/84 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSP SPSYSP+SP YSPTSPSY+P+SP+YSP+SP S +SP YSPSSP+++P Sbjct: 1804 KYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTP 1863 Query: 404 -STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP+S + Y+P T Sbjct: 1864 TSPQYSPTSPKYSPASPN-YSPTT 1886 Score = 109 bits (272), Expect = 2e-22 Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 9/90 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+ Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1751 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 SP +SP S YSPS P YSPSS S Y+P++ Sbjct: 1752 SPSYSPTSPSYSPSSPSYSPSSPS-YSPQS 1780 Score = 108 bits (271), Expect = 2e-22 Identities = 56/83 (67%), Positives = 67/83 (80%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPS--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP YSP+SPS YSP SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +S Sbjct: 1613 YSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1672 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S S Y+P Sbjct: 1673 PTSPSYSPTSPSYSPTSPS-YSP 1694 Score = 106 bits (264), Expect = 1e-21 Identities = 55/82 (67%), Positives = 65/82 (79%), Gaps = 4/82 (4%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPS--YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 SP+SP YSPTSP YSP+SPS YSP SPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1607 SPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1667 TSPSYSPTSPSYSPTSPS-YSP 1687 Score = 106 bits (264), Expect = 1e-21 Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP+YSP SPSYSP+SP YSP+SP+Y+P+SP S SP YSPSSP +SPS Sbjct: 1798 YSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPS 1857 Query: 401 TG-YSPSQPGYSPSSTSQYTP 342 + Y+P+ P YSP+S +Y+P Sbjct: 1858 SPRYTPTSPQYSPTS-PKYSP 1877 Score = 104 bits (260), Expect = 4e-21 Identities = 55/83 (66%), Positives = 64/83 (77%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 F PSSP SP SPSYSPTSP YSP+SPS YSP+SP+YSP+SP S TSP YSP+SP +S Sbjct: 1599 FMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYS 1658 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S S Y+P Sbjct: 1659 PTSPSYSPTSPSYSPTSPS-YSP 1680 Score = 103 bits (256), Expect = 1e-20 Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPSSPQFS 408 +SPSSP + P+SPS SP SPSYSPTSP YSPSSP+ YSP+SP S TSP YSP+SP +S Sbjct: 1592 YSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYS 1651 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S S Y+P Sbjct: 1652 PTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 102 bits (255), Expect = 2e-20 Identities = 54/84 (64%), Positives = 64/84 (76%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP---Q 414 ++SP+SP YSPTSP YSPTSP+YSP SPSYSPSSP YSP+SP + SP YSP+SP Sbjct: 1790 KYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSP 1849 Query: 413 FSPSTGYSPSQPGYSPSSTSQYTP 342 SPS YSPS P Y+P+S QY+P Sbjct: 1850 SSPS--YSPSSPRYTPTS-PQYSP 1870 Score = 95.1 bits (235), Expect = 3e-18 Identities = 56/98 (57%), Positives = 69/98 (70%), Gaps = 17/98 (17%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY-SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +SPSSP YSP+SPSYSP SPSY SP+SP YSP+SP+YSP+SP S TSP+YSP+SP +SP Sbjct: 1762 YSPSSPSYSPSSPSYSPQSPSYASPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSP 1821 Query: 404 STG-YSPSQP--------------GYSPSSTSQYTPKT 336 S+ YSP+ P YSPSS S Y+P + Sbjct: 1822 SSPKYSPTSPSYTPASPSYSPASPSYSPSSPS-YSPSS 1858 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 3/79 (3%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN--SGTSPDYSPSSPQFSP-ST 399 S YSP+SP++ P+SPS SP SPSYSP+SP YSPSSP + S SP YSP+SP +SP S Sbjct: 1589 SPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSP 1648 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1649 SYSPTSPSYSPTSPS-YSP 1666 Score = 89.0 bits (219), Expect = 2e-16 Identities = 38/63 (60%), Positives = 53/63 (84%), Gaps = 1/63 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 ++P+SP YSP SPSYSP+SPSYSP+SP Y+P+SP YSP+SP S SP+YSP++P ++P Sbjct: 1833 YTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTTPSYTPM 1892 Query: 401 TGY 393 +G+ Sbjct: 1893 SGH 1895 Score = 84.0 bits (206), Expect = 8e-15 Identities = 43/74 (58%), Positives = 53/74 (71%) Frame = -2 Query: 563 PYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPS 384 P SP PS + SP YSP+SP++ PSSP+ SP+SP S TSP YSPS SPS+GYSP+ Sbjct: 1577 PTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPS----SPSSGYSPA 1632 Query: 383 QPGYSPSSTSQYTP 342 P YSP+S S Y+P Sbjct: 1633 SPSYSPTSPS-YSP 1645 Score = 81.3 bits (199), Expect = 5e-14 Identities = 37/59 (62%), Positives = 46/59 (77%), Gaps = 1/59 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +SP+SP YSP+SPSYSP+SP Y+PTSP YSP+SP YSP+SP S T+P Y+P S P Sbjct: 1840 YSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTTPSYTPMSGHIVP 1898 Score = 74.3 bits (181), Expect = 6e-12 Identities = 47/84 (55%), Positives = 54/84 (64%), Gaps = 5/84 (5%) Frame = -2 Query: 578 FSPS----SPYSPTSPS-YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 FSPS +P SP SP SP PS + SP YSPSSP + PSSP S SP YSP+SP Sbjct: 1560 FSPSWMSPTPGSPVSPGPTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPG 1619 Query: 413 FSPSTGYSPSQPGYSPSSTSQYTP 342 +SPS SPS GYSP+S S Y+P Sbjct: 1620 YSPS---SPSS-GYSPASPS-YSP 1638 Score = 60.8 bits (146), Expect = 7e-08 Identities = 41/91 (45%), Positives = 51/91 (56%), Gaps = 12/91 (13%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY---NSGTSPDYSPSSPQFS 408 FSPS+ + S SPS+ +P SP SP P+SPY + SP YSPSSP F Sbjct: 1544 FSPSAASDASGMSPGGFSPSWMSPTPG-SPVSP--GPTSPYIPSPAAASPGYSPSSPAFM 1600 Query: 407 PST--------GYSPSQPGYSPSS-TSQYTP 342 PS+ YSP+ PGYSPSS +S Y+P Sbjct: 1601 PSSPSMSPASPSYSPTSPGYSPSSPSSGYSP 1631 [21][TOP] >UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054 RepID=UPI0000F24379 Length = 1739 Score = 119 bits (299), Expect = 1e-25 Identities = 61/98 (62%), Positives = 75/98 (76%), Gaps = 11/98 (11%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP+ Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1700 Query: 401 TG-YSPSQPGYSPSST---------SQYTPKTNDNKDD 318 + YSP+ P YSP+S S +PKT D K++ Sbjct: 1701 SPLYSPTSPQYSPTSPQYSPGSPEYSPNSPKTEDKKNE 1738 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1673 SPSYSPTSPSYSPTS-PQYSP 1692 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1571 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1652 SPSYSPTSPSYSPTSPS-YSP 1671 Score = 117 bits (293), Expect = 6e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1693 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1694 SPQYSPTSPLYSPTS-PQYSP 1713 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1564 YSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1623 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1624 SPSYSPTSPSYSPTSPS-YSP 1643 Score = 112 bits (280), Expect = 2e-23 Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1547 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1606 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1607 SPTSPSYSPTSPS-YSP 1622 Score = 108 bits (269), Expect = 4e-22 Identities = 54/79 (68%), Positives = 62/79 (78%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 S S Y TSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1538 SVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1597 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1598 SYSPTSPSYSPTSPS-YSP 1615 Score = 89.0 bits (219), Expect = 2e-16 Identities = 53/94 (56%), Positives = 62/94 (65%), Gaps = 17/94 (18%) Frame = -2 Query: 572 PSSPYSPTSP-SYSP---------------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 P+SP S TSP SY TSPSYSPTSPSYSP+SP+YSP+SP S TS Sbjct: 1517 PTSP-SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1575 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1576 PAYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1608 Score = 88.6 bits (218), Expect = 3e-16 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 4/82 (4%) Frame = -2 Query: 575 SPSSPYS--PTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 S +SP+S TSPS+ + SP Y TSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1521 SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSP 1580 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1581 TSPSYSPTSPSYSPTSPS-YSP 1601 Score = 62.8 bits (151), Expect = 2e-08 Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 3/73 (4%) Frame = -2 Query: 551 TSPSYSPTSPSYSPTSP-SYSPSSPTYSPS-SPYNSGTSPDYSPSSPQFSP-STGYSPSQ 381 TS PTSPS TSP SY +SP++ S SP GTSP YSP+SP +SP S YSP+ Sbjct: 1511 TSYGGQPTSPS--ATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTS 1568 Query: 380 PGYSPSSTSQYTP 342 P YSP+S + Y+P Sbjct: 1569 PSYSPTSPA-YSP 1580 [22][TOP] >UniRef100_Q6ZJR1 DNA-directed RNA polymerase largest chain-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6ZJR1_ORYSJ Length = 138 Score = 119 bits (299), Expect = 1e-25 Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 7/90 (7%) Frame = -2 Query: 578 FSPSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY--NSGTSPDYSPSSP 417 +SPSSP YS TSP+YSPTSP+YSPTSPSYS SP+YSP+SPY + G SPDYSP+SP Sbjct: 42 YSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSP 101 Query: 416 QFSPSTGYSPSQPGYSPSST-SQYTPKTND 330 +SPS YSP+ PGYSPSST Q++P+ D Sbjct: 102 NYSPSGSYSPTAPGYSPSSTGQQFSPQAAD 131 [23][TOP] >UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FZ51_ORYSJ Length = 1526 Score = 119 bits (299), Expect = 1e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1326 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1385 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ PGYSP+S S Y+P Sbjct: 1386 SPAYSPTSPGYSPTSPS-YSP 1405 Score = 119 bits (299), Expect = 1e-25 Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 7/90 (7%) Frame = -2 Query: 578 FSPSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY--NSGTSPDYSPSSP 417 +SPSSP YS TSP+YSPTSP+YSPTSPSYS SP+YSP+SPY + G SPDYSP+SP Sbjct: 1430 YSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSP 1489 Query: 416 QFSPSTGYSPSQPGYSPSST-SQYTPKTND 330 +SPS YSP+ PGYSPSST Q++P+ D Sbjct: 1490 NYSPSGSYSPTAPGYSPSSTGQQFSPQAAD 1519 Score = 116 bits (291), Expect = 1e-24 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1277 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPT 1336 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1337 SPSYSPTSPSYSPTSPS-YSP 1356 Score = 116 bits (291), Expect = 1e-24 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1347 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1406 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y+PSS ++Y+P Sbjct: 1407 SPNYSPTSPSYNPSS-AKYSP 1426 Score = 114 bits (285), Expect = 5e-24 Identities = 55/80 (68%), Positives = 63/80 (78%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +SP YSPTSPSYSP SPSYSPTSPSY+P SPTYSP+SP S TSP YSP+SP +SP S Sbjct: 1229 YSPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTS 1288 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1289 PSYSPTSPSYSPTSPS-YSP 1307 Score = 114 bits (284), Expect = 7e-24 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1312 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1371 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1372 SPSYSPTSPSYSPTSPA-YSP 1391 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1256 YTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1315 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1316 SPVYSPTSPAYSPTSPA-YSP 1335 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1298 YSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1357 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1358 SPSYSPTSPSYSPTSPS-YSP 1377 Score = 112 bits (281), Expect = 2e-23 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1305 YSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1364 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1365 SPSYSPTSPSYSPTSPS-YSP 1384 Score = 110 bits (276), Expect = 6e-23 Identities = 54/82 (65%), Positives = 65/82 (79%), Gaps = 3/82 (3%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+PSS ++SPS Sbjct: 1368 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPS 1427 Query: 401 TGYSPSQPGYSPSS--TSQYTP 342 YSPS P SP S + Y+P Sbjct: 1428 HAYSPSSPRLSPYSQTSPNYSP 1449 Score = 110 bits (274), Expect = 1e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP Y+P SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1249 YSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1308 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1309 SPSYSPTSPVYSPTSPA-YSP 1328 Score = 107 bits (268), Expect = 5e-22 Identities = 54/75 (72%), Positives = 64/75 (85%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP S TSP+YSP+SP ++PS Sbjct: 1361 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPS 1420 Query: 401 TG-YSPSQPGYSPSS 360 + YSPS YSPSS Sbjct: 1421 SAKYSPSH-AYSPSS 1434 Score = 105 bits (263), Expect = 2e-21 Identities = 51/80 (63%), Positives = 60/80 (75%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +SPSSP P YSPTSPSYSP SPSYSP+SP+Y+P SP S TSP YSP+SP +SP S Sbjct: 1222 YSPSSPVYSPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTS 1281 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1282 PSYSPTSPSYSPTSPS-YSP 1300 Score = 87.4 bits (215), Expect = 7e-16 Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 2/79 (2%) Frame = -2 Query: 572 PSSPYSPTSPS-YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 PS Y+P+S YSP+SP YSP P YSP+SP+YSP+SP S TSP Y+P SP +SP S Sbjct: 1210 PSPGYTPSSGGGYSPSSPVYSP-GPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSP 1268 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1269 SYSPTSPSYSPTSPS-YSP 1286 Score = 55.1 bits (131), Expect = 4e-06 Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 3/81 (3%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPT--SPSYSP-SSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 SPS SP + T +SP ++SP SP Y+PSS YSPSSP +SP Sbjct: 1178 SPSYLLSPNIRASPITDAQFSPYVGGMAFSPVPSPGYTPSS------GGGYSPSSPVYSP 1231 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 GYSP+ P YSP+S S Y+P Sbjct: 1232 GPGYSPTSPSYSPASPS-YSP 1251 [24][TOP] >UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115 RepID=C4R4Y0_PICPG Length = 1743 Score = 119 bits (299), Expect = 1e-25 Identities = 59/82 (71%), Positives = 69/82 (84%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1552 RYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1611 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1612 TSPSYSPTSPSYSPTS-PQYSP 1632 Score = 118 bits (296), Expect = 3e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1588 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPT 1647 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1648 SPQYSPTSPQYSPTS-PQYSP 1667 Score = 118 bits (295), Expect = 4e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1574 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1633 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1634 SPQYSPTSPQYSPTS-PQYSP 1653 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1560 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1619 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1620 SPSYSPTSPQYSPTS-PQYSP 1639 Score = 115 bits (289), Expect = 2e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F+P+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1546 FAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1605 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1606 SPSYSPTSPSYSPTSPS-YSP 1625 Score = 114 bits (286), Expect = 4e-24 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1609 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1668 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1669 SPQYSPTSPQYSPTS-PQYSP 1688 Score = 113 bits (283), Expect = 9e-24 Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1629 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1688 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1689 TSPQYSPTSPQYSPTS-PQYSP 1709 Score = 113 bits (283), Expect = 9e-24 Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1650 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1709 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1710 TSPQYSPTSPQYSPAS-PQYSP 1730 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F+P+SP ++PTSP YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1539 FAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1598 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1599 SPSYSPTSPSYSPTSPS-YSP 1618 Score = 110 bits (276), Expect = 6e-23 Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 2/78 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1657 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1716 Query: 404 -STGYSPSQPGYSPSSTS 354 S YSP+ P YSPS S Sbjct: 1717 TSPQYSPASPQYSPSRHS 1734 Score = 102 bits (255), Expect = 2e-20 Identities = 50/80 (62%), Positives = 63/80 (78%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 S +SP ++PTSP ++PTSP YSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1533 SATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1592 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1593 PSYSPTSPSYSPTSPS-YSP 1611 Score = 99.0 bits (245), Expect = 2e-19 Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1671 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPASPQYSP 1730 Query: 404 STGYSPS 384 S +SP+ Sbjct: 1731 SR-HSPN 1736 Score = 97.4 bits (241), Expect = 7e-19 Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 1/76 (1%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390 SPY PTSP S TSP ++PTSP ++P+SP YSP+SP S TSP YSP+SP +SP S YS Sbjct: 1523 SPYQPTSPGLSATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYS 1582 Query: 389 PSQPGYSPSSTSQYTP 342 P+ P YSP+S S Y+P Sbjct: 1583 PTSPSYSPTSPS-YSP 1597 Score = 70.9 bits (172), Expect = 7e-11 Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 1/50 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSPS +G S + Sbjct: 1692 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPASPQYSPSRHSPNGESKE 1741 [25][TOP] >UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus RepID=A5E6J4_LODEL Length = 1745 Score = 119 bits (298), Expect = 2e-25 Identities = 60/88 (68%), Positives = 68/88 (77%), Gaps = 2/88 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1659 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPT 1718 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKD 321 S YSP P YSP S +Y PK+ KD Sbjct: 1719 SPQYSPRSPNYSPKS-PEYKPKSPSKKD 1745 Score = 118 bits (296), Expect = 3e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1631 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1690 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1691 SPQYSPTSPSYSPTSPS-YSP 1710 Score = 118 bits (296), Expect = 3e-25 Identities = 58/83 (69%), Positives = 70/83 (84%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1645 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPT 1704 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP+S QY+P++ Sbjct: 1705 SPSYSPTSPQYSPTS-PQYSPRS 1726 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1554 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1613 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1614 SPSYSPTSPSYSPTSPS-YSP 1633 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1575 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1634 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1635 SPSYSPTSPSYSPTSPS-YSP 1654 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1596 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1655 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1656 SPSYSPTSPSYSPTSPS-YSP 1675 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1617 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1676 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1677 SPSYSPTSPQYSPTS-PQYSP 1696 Score = 114 bits (286), Expect = 4e-24 Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1535 SPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1594 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1595 SYSPTSPSYSPTSPS-YSP 1612 Score = 77.8 bits (190), Expect = 6e-13 Identities = 43/79 (54%), Positives = 53/79 (67%), Gaps = 3/79 (3%) Frame = -2 Query: 569 SSPYS-PTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP+S T+P Y TSP Y TSP Y SP+SP+YSP+SP S TSP YSP+SP Sbjct: 1513 TSPFSYGTTPGYGGTSPGYGGTSPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPS----- 1567 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1568 -YSPTSPSYSPTSPS-YSP 1584 [26][TOP] >UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 23 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B2C Length = 1888 Score = 119 bits (297), Expect = 2e-25 Identities = 59/83 (71%), Positives = 69/83 (83%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736 Query: 404 STGYSPSQPGYSPSS--TSQYTP 342 S YSP+ P YSPSS + +YTP Sbjct: 1737 SPSYSPTSPNYSPSSPTSPKYTP 1759 Score = 117 bits (294), Expect = 5e-25 Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S S N + P Sbjct: 1723 SPSYSPTSPSYSPTSPSYSPTSPNYSPSSP 1752 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1716 SPSYSPTSPSYSPTSPS-YSP 1735 Score = 117 bits (292), Expect = 8e-25 Identities = 58/84 (69%), Positives = 69/84 (82%), Gaps = 5/84 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1750 Query: 401 T----GYSPSQPGYSPSSTSQYTP 342 + Y+P+ P YSPSS +YTP Sbjct: 1751 SPTSPKYTPTSPSYSPSS-PEYTP 1773 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686 Score = 110 bits (276), Expect = 6e-23 Identities = 57/84 (67%), Positives = 69/84 (82%), Gaps = 5/84 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN---SGTSPDYSPSSPQF 411 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPSSP + + TSP YSPSSP++ Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEY 1771 Query: 410 SP-STGYSPSQPGYSPSSTSQYTP 342 +P S YSP+ P YSP+S +Y+P Sbjct: 1772 TPTSPKYSPTSPKYSPTS-PKYSP 1794 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1777 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1836 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1837 TSPKYSPTSPTYSPTSPKGSTYSP 1860 Score = 108 bits (270), Expect = 3e-22 Identities = 55/84 (65%), Positives = 70/84 (83%), Gaps = 5/84 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY---NSGTSPDYSPSSPQF 411 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP +S TSP Y+P+SP + Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSY 1764 Query: 410 SPST-GYSPSQPGYSPSSTSQYTP 342 SPS+ Y+P+ P YSP+S +Y+P Sbjct: 1765 SPSSPEYTPTSPKYSPTS-PKYSP 1787 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1764 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1823 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1824 SPKYSPTSPTYSPTS-PKYSP 1843 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1791 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1850 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1851 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1883 Score = 105 bits (263), Expect = 2e-21 Identities = 54/84 (64%), Positives = 68/84 (80%), Gaps = 5/84 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 +SP+SP YSPTSPSYSPTSP+Y SPTSP Y+P+SP+YSPSSP + TSP YSP+SP++ Sbjct: 1726 YSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKY 1785 Query: 410 SP-STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ P YSP +T +Y+P Sbjct: 1786 SPTSPKYSPTSPTYSP-TTPKYSP 1808 Score = 104 bits (259), Expect = 6e-21 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 5/84 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 +SP+SP YSPTSP+YSP TSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++ Sbjct: 1733 YSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKY 1792 Query: 410 SP-STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ P YSP+S + Y+P Sbjct: 1793 SPTSPTYSPTTPKYSPTSPT-YSP 1815 Score = 104 bits (259), Expect = 6e-21 Identities = 51/84 (60%), Positives = 66/84 (78%), Gaps = 5/84 (5%) Frame = -2 Query: 578 FSPSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 +SPSSP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++ Sbjct: 1747 YSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1806 Query: 410 SP-STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ P Y+P+S +Y+P Sbjct: 1807 SPTSPTYSPTSPVYTPTS-PKYSP 1829 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1805 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1864 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1865 YSPTSPTYSLTSPAISPDDSDE 1886 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1545 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1597 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1598 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1623 [27][TOP] >UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens RepID=B3RM26_TRIAD Length = 1784 Score = 119 bits (297), Expect = 2e-25 Identities = 59/82 (71%), Positives = 70/82 (85%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP++SP Sbjct: 1682 RYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSP 1741 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1742 TSPSYSPTSPRYSPTSPS-YSP 1762 Score = 116 bits (291), Expect = 1e-24 Identities = 58/82 (70%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1633 RYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSP 1692 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1693 TSPSYSPTSPSYSPTSPS-YSP 1713 Score = 115 bits (288), Expect = 2e-24 Identities = 57/82 (69%), Positives = 69/82 (84%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1675 KYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSP 1734 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1735 TSPRYSPTSPSYSPTS-PRYSP 1755 Score = 115 bits (287), Expect = 3e-24 Identities = 57/82 (69%), Positives = 67/82 (81%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R+SP+SP YSPTSPSYSPTSP YSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1654 RYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1713 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1714 TSPSYSPTSPRYSPTSPS-YSP 1734 Score = 115 bits (287), Expect = 3e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP++SP Sbjct: 1669 YSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPT 1728 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1729 SPSYSPTSPRYSPTSPS-YSP 1748 Score = 114 bits (284), Expect = 7e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP++SP Sbjct: 1599 YSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPT 1658 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1659 SPSYSPTSPSYSPTS-PKYSP 1678 Score = 114 bits (284), Expect = 7e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1613 YSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPT 1672 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1673 SPKYSPTSPRYSPTSPS-YSP 1692 Score = 113 bits (283), Expect = 9e-24 Identities = 56/82 (68%), Positives = 67/82 (81%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1591 KYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSP 1650 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1651 TSPRYSPTSPSYSPTSPS-YSP 1671 Score = 112 bits (280), Expect = 2e-23 Identities = 56/81 (69%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1704 YSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPT 1763 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S Y+P Sbjct: 1764 SPSYSPTSPSYSPTS-PDYSP 1783 Score = 108 bits (271), Expect = 2e-22 Identities = 54/76 (71%), Positives = 61/76 (80%), Gaps = 1/76 (1%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390 S YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S YS Sbjct: 1590 SKYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYS 1649 Query: 389 PSQPGYSPSSTSQYTP 342 P+ P YSP+S S Y+P Sbjct: 1650 PTSPRYSPTSPS-YSP 1664 Score = 102 bits (253), Expect = 3e-20 Identities = 50/73 (68%), Positives = 57/73 (78%), Gaps = 1/73 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP Sbjct: 1718 YSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSP----- 1772 Query: 401 TGYSPSQPGYSPS 363 YSP+ P YSP+ Sbjct: 1773 -SYSPTSPDYSPN 1784 Score = 65.5 bits (158), Expect = 3e-09 Identities = 46/98 (46%), Positives = 55/98 (56%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPY--SPTSPSYSPTSPS---------------YSPTSPSYS---PSSPTYSPSSPYN 453 PSSPY SPT ++ S YSPTSP P+SP YSP+SP Sbjct: 1557 PSSPYMQSPTDITFYVAFQSIILTVESKLLTDFSKYSPTSP---SYSPTSPRYSPTSPSY 1613 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1614 SPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPS-YSP 1650 [28][TOP] >UniRef100_C4Y5N3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y5N3_CLAL4 Length = 281 Score = 119 bits (297), Expect = 2e-25 Identities = 61/87 (70%), Positives = 68/87 (78%), Gaps = 2/87 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 195 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 254 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNK 324 S YSP P YSP S S Y K D K Sbjct: 255 SPQYSPGSPSYSPRSPS-YGDKKEDEK 280 Score = 118 bits (296), Expect = 3e-25 Identities = 61/92 (66%), Positives = 73/92 (79%), Gaps = 5/92 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 188 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 247 Query: 404 STGYSPSQPGYSPSSTSQYTPKT---NDNKDD 318 S YSP+ P YSP S S Y+P++ D K+D Sbjct: 248 SPQYSPTSPQYSPGSPS-YSPRSPSYGDKKED 278 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 97 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 156 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 157 SPSYSPTSPSYSPTSPS-YSP 176 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 118 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 177 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 178 SPSYSPTSPSYSPTSPS-YSP 197 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 139 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 198 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 199 SPSYSPTSPSYSPTSPS-YSP 218 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 160 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 219 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 220 SPSYSPTSPSYSPTSPS-YSP 239 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 181 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 240 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 241 SPSYSPTSPQYSPTS-PQYSP 260 Score = 112 bits (281), Expect = 2e-23 Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y Sbjct: 80 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 139 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 140 SPTSPSYSPTSPS-YSP 155 Score = 106 bits (264), Expect = 1e-21 Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S Y TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y Sbjct: 73 SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 132 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 133 SPTSPSYSPTSPS-YSP 148 Score = 100 bits (249), Expect = 8e-20 Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 11/89 (12%) Frame = -2 Query: 575 SPSSPYS----------PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 SP+SP+S TSP Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP Sbjct: 54 SPTSPFSYGGASPAFGGATSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 113 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP +SP S YSP+ P YSP+S S Y+P Sbjct: 114 TSPSYSPTSPSYSPTSPSYSPTSPS-YSP 141 [29][TOP] >UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36 RepID=B9WN64_CANDC Length = 1735 Score = 119 bits (297), Expect = 2e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1620 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1679 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1680 SPSYSPTSPQYSPTSPS-YSP 1699 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1693 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1694 SPSYSPTSPQYSPTS-PQYSP 1713 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1578 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPT 1637 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1638 SPSYSPTSPSYSPTSPS-YSP 1657 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1665 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1666 SPSYSPTSPQYSPTSPS-YSP 1685 Score = 116 bits (291), Expect = 1e-24 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1571 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPT 1630 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650 Score = 115 bits (288), Expect = 2e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1659 SPQYSPTSPSYSPTS-PQYSP 1678 Score = 115 bits (287), Expect = 3e-24 Identities = 56/89 (62%), Positives = 65/89 (73%), Gaps = 1/89 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1538 SPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1597 Query: 398 GYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 YSP+ P YSP+S S + + PG Sbjct: 1598 SYSPTSPSYSPTSPSYSPTSPSYSPTSPG 1626 Score = 114 bits (286), Expect = 4e-24 Identities = 57/83 (68%), Positives = 66/83 (79%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1648 YSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1707 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP S Y PK+ Sbjct: 1708 SPQYSPTSPRYSPGSPG-YEPKS 1729 Score = 112 bits (280), Expect = 2e-23 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPT 1700 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1701 SPQYSPTSPQYSPTS-PRYSP 1720 Score = 99.0 bits (245), Expect = 2e-19 Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S Y+ YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1533 SPGYASPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1592 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1593 SPTSPSYSPTSPS-YSP 1608 Score = 90.9 bits (224), Expect = 7e-17 Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 6/82 (7%) Frame = -2 Query: 569 SSPYS-----PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +SP+S TSP Y+ YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1521 TSPFSFGYNTATSPGYASPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1580 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1581 TSPSYSPTSPSYSPTSPS-YSP 1601 Score = 86.3 bits (212), Expect = 2e-15 Identities = 40/57 (70%), Positives = 46/57 (80%), Gaps = 1/57 (1%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 ++SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP YSP+SP S SP Y P SP+ Sbjct: 1675 QYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPRYSPGSPGYEPKSPK 1731 Score = 85.9 bits (211), Expect = 2e-15 Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 6/74 (8%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYS----PSSPTYSPSSPYNSGTSPDYSPSSP 417 ++SP+SP YSPTSP YSPTSPSYSPTSP YS +YSP+SP S TSP YSP+SP Sbjct: 1661 QYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSP----SYSPTSPQYSPTSPQYSPTSP 1716 Query: 416 QFSP-STGYSPSQP 378 ++SP S GY P P Sbjct: 1717 RYSPGSPGYEPKSP 1730 Score = 76.6 bits (187), Expect = 1e-12 Identities = 44/73 (60%), Positives = 49/73 (67%), Gaps = 5/73 (6%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS----PSSPTYSPSSPYNSGTSPDYSPSSPQ 414 +SP+SP YSPTSPSYSPTSP YSPTSPSYS YSP+SP S TSP YSP SP Sbjct: 1669 YSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSP----QYSPTSPQYSPTSPRYSPGSPG 1724 Query: 413 FSPSTGYSPSQPG 375 + P SP + G Sbjct: 1725 YEPK---SPKKDG 1734 Score = 70.9 bits (172), Expect = 7e-11 Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 1/46 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG 447 ++SP+SP YSPTSP YSPTSP YSPTSP YSP SP Y P SP G Sbjct: 1689 QYSPTSPSYSPTSPQYSPTSPQYSPTSPRYSPGSPGYEPKSPKKDG 1734 [30][TOP] >UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 1 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48673 Length = 1880 Score = 118 bits (296), Expect = 3e-25 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP++SP Sbjct: 1668 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPT 1727 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP S S Y+P Sbjct: 1728 SPSYSPTSPSYSPQSPS-YSP 1747 Score = 118 bits (295), Expect = 4e-25 Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1720 Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336 + YSP+ P YSP+S S Y+P++ Sbjct: 1721 SPKYSPTSPSYSPTSPS-YSPQS 1742 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1584 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1643 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1644 SPSYSPTSPSYSPTSPS-YSP 1663 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1664 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1665 SPSYSPTSPSYSPTSPS-YSP 1684 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1685 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1686 SPSYSPTSPSYSPTSPS-YSP 1705 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1647 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1706 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPSS +Y+P Sbjct: 1707 SPSYSPTSPSYSPSS-PKYSP 1726 Score = 117 bits (292), Expect = 8e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSPSYSPTSPSYSPTSP++SPSSPTYSP+SP S TSP YSPSSP++SP Sbjct: 1752 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPT 1811 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1812 SPTYSPTSPKYSPASPT-YSP 1831 Score = 115 bits (289), Expect = 2e-24 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSPSYSPTSPSYSP SPSYSP SP+YSPSSP S TSP YSP+SP +SP Sbjct: 1717 YSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPT 1776 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S +SPS P YSP+S S Y+P Sbjct: 1777 SPNFSPSSPTYSPASPS-YSP 1796 Score = 115 bits (287), Expect = 3e-24 Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPT 1734 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP P YSP S S Y+P + Sbjct: 1735 SPSYSPQSPSYSPGSPS-YSPSS 1756 Score = 113 bits (282), Expect = 1e-23 Identities = 55/79 (69%), Positives = 63/79 (79%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 SPS YSPTSPSYSPTSP YSP SPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1565 SPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1624 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1625 SYSPTSPSYSPTSPS-YSP 1642 Score = 110 bits (276), Expect = 6e-23 Identities = 56/92 (60%), Positives = 69/92 (75%), Gaps = 5/92 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP S TSP YSPSSP +SP+ Sbjct: 1787 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1846 Query: 401 ----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + YSP+ P YSP+S S Y+P + DD Sbjct: 1847 SPKGSTYSPTSPSYSPTSPS-YSPTSPGMGDD 1877 Score = 110 bits (275), Expect = 8e-23 Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP Sbjct: 1703 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1762 Query: 404 STGYSPSQPGYSPSS 360 S YSP+ P YSP+S Sbjct: 1763 SPSYSPTSPSYSPTS 1777 Score = 109 bits (273), Expect = 1e-22 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS Sbjct: 1745 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPS 1804 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 + YSP+ P YSP+S +Y+P Sbjct: 1805 SPKYSPTSPTYSPTS-PKYSP 1824 Score = 108 bits (269), Expect = 4e-22 Identities = 55/83 (66%), Positives = 65/83 (78%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP +SP+SP+YSP SPSYSPTSP YSPSSP YSP+SP S TSP YSP+SP +SP Sbjct: 1773 YSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPT 1832 Query: 404 STGYSPSQPGYSPSST--SQYTP 342 S YSPS P YSP+S S Y+P Sbjct: 1833 SPKYSPSSPTYSPTSPKGSTYSP 1855 Score = 107 bits (267), Expect = 7e-22 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP SP YSP SPSYSP+SP YSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP Sbjct: 1738 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPT 1797 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSPS P YSP+S + Y+P Sbjct: 1798 SPKYSPSSPKYSPTSPT-YSP 1817 Score = 100 bits (250), Expect = 6e-20 Identities = 55/97 (56%), Positives = 66/97 (68%), Gaps = 9/97 (9%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSPTSPSYSP+SP YSP+SP+YSP+SP S SP YSP Sbjct: 1689 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPG 1748 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP +SPS+ YSP+ P YSP+S S N + P Sbjct: 1749 SPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSP 1785 Score = 91.7 bits (226), Expect = 4e-17 Identities = 49/82 (59%), Positives = 57/82 (69%), Gaps = 3/82 (3%) Frame = -2 Query: 578 FSP--SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 FSP S +SP S SP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1548 FSPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSP 1607 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1608 TSPSYSPTSPSYSPTSPS-YSP 1628 Score = 62.8 bits (151), Expect = 2e-08 Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 5/80 (6%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSP--SSPTYSPSSPYN--SGTSPDYSPSSPQFSP-S 402 S +P P +SP + + SP+YSP S SP SP S TSP YSP+SP +SP S Sbjct: 1529 SGMTPGGPGFSPANSESTGFSPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPAS 1588 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607 Score = 60.8 bits (146), Expect = 7e-08 Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 4/38 (10%) Frame = -2 Query: 581 RFSPSSP-YSPTSP---SYSPTSPSYSPTSPSYSPSSP 480 ++SPSSP YSPTSP +YSPTSPSYSPTSPSYSP+SP Sbjct: 1835 KYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTSP 1872 [31][TOP] >UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 2 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48672 Length = 1913 Score = 118 bits (296), Expect = 3e-25 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP++SP Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPT 1760 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP S S Y+P Sbjct: 1761 SPSYSPTSPSYSPQSPS-YSP 1780 Score = 118 bits (295), Expect = 4e-25 Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1694 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1753 Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336 + YSP+ P YSP+S S Y+P++ Sbjct: 1754 SPKYSPTSPSYSPTSPS-YSPQS 1775 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1617 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1676 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1677 SPSYSPTSPSYSPTSPS-YSP 1696 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1697 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1698 SPSYSPTSPSYSPTSPS-YSP 1717 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1659 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1718 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1719 SPSYSPTSPSYSPTSPS-YSP 1738 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1680 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1739 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPSS +Y+P Sbjct: 1740 SPSYSPTSPSYSPSS-PKYSP 1759 Score = 117 bits (292), Expect = 8e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSPSYSPTSPSYSPTSP++SPSSPTYSP+SP S TSP YSPSSP++SP Sbjct: 1785 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPT 1844 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1845 SPTYSPTSPKYSPASPT-YSP 1864 Score = 115 bits (289), Expect = 2e-24 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSPSYSPTSPSYSP SPSYSP SP+YSPSSP S TSP YSP+SP +SP Sbjct: 1750 YSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPT 1809 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S +SPS P YSP+S S Y+P Sbjct: 1810 SPNFSPSSPTYSPASPS-YSP 1829 Score = 115 bits (288), Expect = 2e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1610 YSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1669 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1670 SPSYSPTSPSYSPTSPS-YSP 1689 Score = 115 bits (287), Expect = 3e-24 Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP Sbjct: 1708 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPT 1767 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP P YSP S S Y+P + Sbjct: 1768 SPSYSPQSPSYSPGSPS-YSPSS 1789 Score = 110 bits (276), Expect = 6e-23 Identities = 56/92 (60%), Positives = 69/92 (75%), Gaps = 5/92 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP S TSP YSPSSP +SP+ Sbjct: 1820 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1879 Query: 401 ----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + YSP+ P YSP+S S Y+P + DD Sbjct: 1880 SPKGSTYSPTSPSYSPTSPS-YSPTSPGMGDD 1910 Score = 110 bits (275), Expect = 8e-23 Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP Sbjct: 1736 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1795 Query: 404 STGYSPSQPGYSPSS 360 S YSP+ P YSP+S Sbjct: 1796 SPSYSPTSPSYSPTS 1810 Score = 109 bits (273), Expect = 1e-22 Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 + P+SP +P SP YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1590 YLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1649 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1650 PSYSPTSPSYSPTSPS-YSP 1668 Score = 109 bits (273), Expect = 1e-22 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS Sbjct: 1778 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPS 1837 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 + YSP+ P YSP+S +Y+P Sbjct: 1838 SPKYSPTSPTYSPTS-PKYSP 1857 Score = 108 bits (269), Expect = 4e-22 Identities = 55/83 (66%), Positives = 65/83 (78%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP +SP+SP+YSP SPSYSPTSP YSPSSP YSP+SP S TSP YSP+SP +SP Sbjct: 1806 YSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPT 1865 Query: 404 STGYSPSQPGYSPSST--SQYTP 342 S YSPS P YSP+S S Y+P Sbjct: 1866 SPKYSPSSPTYSPTSPKGSTYSP 1888 Score = 107 bits (267), Expect = 7e-22 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP SP YSP SPSYSP+SP YSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP Sbjct: 1771 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPT 1830 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSPS P YSP+S + Y+P Sbjct: 1831 SPKYSPSSPKYSPTSPT-YSP 1850 Score = 100 bits (250), Expect = 6e-20 Identities = 55/97 (56%), Positives = 66/97 (68%), Gaps = 9/97 (9%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSPTSPSYSP+SP YSP+SP+YSP+SP S SP YSP Sbjct: 1722 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPG 1781 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP +SPS+ YSP+ P YSP+S S N + P Sbjct: 1782 SPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSP 1818 Score = 99.4 bits (246), Expect = 2e-19 Identities = 53/85 (62%), Positives = 61/85 (71%), Gaps = 8/85 (9%) Frame = -2 Query: 572 PSSP-YSPTSPSY------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 P SP YSP SPSY +P SP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP Sbjct: 1578 PMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS 1637 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S YSP+ P YSP+S S Y+P Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPS-YSP 1661 Score = 77.8 bits (190), Expect = 6e-13 Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPTSPSYS-PTSPSYSPSSPTY---SPSSPYNSG---TSPDYS 429 +SP+ P SP SP+ SP PS + P SPSYSP+SP+Y SP++P + G TSP YS Sbjct: 1552 YSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYS 1611 Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1612 PTSPGYSPASPSYSPTSPSYSPTSPS-YSP 1640 Score = 73.6 bits (179), Expect = 1e-11 Identities = 48/90 (53%), Positives = 59/90 (65%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSPYSPT-SPS-YSPTSPSYS--------PTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 FSP+ YSP SP SP SP+ S P SPSYSP+SP+Y P+SP + SP YS Sbjct: 1548 FSPA--YSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASP-ATPQSPGYS 1604 Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P+SP +SP S GYSP+ P YSP+S S Y+P Sbjct: 1605 PTSPSYSPTSPGYSPASPSYSPTSPS-YSP 1633 Score = 60.8 bits (146), Expect = 7e-08 Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 4/38 (10%) Frame = -2 Query: 581 RFSPSSP-YSPTSP---SYSPTSPSYSPTSPSYSPSSP 480 ++SPSSP YSPTSP +YSPTSPSYSPTSPSYSP+SP Sbjct: 1868 KYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTSP 1905 [32][TOP] >UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 3 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48671 Length = 1921 Score = 118 bits (296), Expect = 3e-25 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP++SP Sbjct: 1709 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPT 1768 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP S S Y+P Sbjct: 1769 SPSYSPTSPSYSPQSPS-YSP 1788 Score = 118 bits (295), Expect = 4e-25 Identities = 58/83 (69%), Positives = 71/83 (85%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1702 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1761 Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336 + YSP+ P YSP+S S Y+P++ Sbjct: 1762 SPKYSPTSPSYSPTSPS-YSPQS 1783 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1625 YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1685 SPSYSPTSPSYSPTSPS-YSP 1704 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1706 SPSYSPTSPSYSPTSPS-YSP 1725 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1726 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1727 SPSYSPTSPSYSPTSPS-YSP 1746 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1747 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPSS +Y+P Sbjct: 1748 SPSYSPTSPSYSPSS-PKYSP 1767 Score = 117 bits (292), Expect = 8e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSPSYSPTSPSYSPTSP++SPSSPTYSP+SP S TSP YSPSSP++SP Sbjct: 1793 YSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPT 1852 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1853 SPTYSPTSPKYSPASPT-YSP 1872 Score = 115 bits (289), Expect = 2e-24 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSPSYSPTSPSYSP SPSYSP SP+YSPSSP S TSP YSP+SP +SP Sbjct: 1758 YSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPT 1817 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S +SPS P YSP+S S Y+P Sbjct: 1818 SPNFSPSSPTYSPASPS-YSP 1837 Score = 115 bits (288), Expect = 2e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1618 YSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1677 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1678 SPSYSPTSPSYSPTSPS-YSP 1697 Score = 115 bits (287), Expect = 3e-24 Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP Sbjct: 1716 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPT 1775 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP P YSP S S Y+P + Sbjct: 1776 SPSYSPQSPSYSPGSPS-YSPSS 1797 Score = 110 bits (276), Expect = 6e-23 Identities = 56/92 (60%), Positives = 69/92 (75%), Gaps = 5/92 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP YSP+SP YSPTSP+YSP+SP YSP+SP S TSP YSPSSP +SP+ Sbjct: 1828 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1887 Query: 401 ----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + YSP+ P YSP+S S Y+P + DD Sbjct: 1888 SPKGSTYSPTSPSYSPTSPS-YSPTSPGMGDD 1918 Score = 110 bits (275), Expect = 8e-23 Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSP+SP YSPTSPSYSP+SP+YSP SP S SP YSPSSP++SP Sbjct: 1744 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1803 Query: 404 STGYSPSQPGYSPSS 360 S YSP+ P YSP+S Sbjct: 1804 SPSYSPTSPSYSPTS 1818 Score = 109 bits (273), Expect = 1e-22 Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 + P+SP +P SP YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1598 YLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1657 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1658 PSYSPTSPSYSPTSPS-YSP 1676 Score = 109 bits (273), Expect = 1e-22 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP SP YSP+SP YSPTSPSYSPTSPSYSP+SP +SPSSP S SP YSP+SP++SPS Sbjct: 1786 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPS 1845 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 + YSP+ P YSP+S +Y+P Sbjct: 1846 SPKYSPTSPTYSPTS-PKYSP 1865 Score = 108 bits (269), Expect = 4e-22 Identities = 55/83 (66%), Positives = 65/83 (78%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP +SP+SP+YSP SPSYSPTSP YSPSSP YSP+SP S TSP YSP+SP +SP Sbjct: 1814 YSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPT 1873 Query: 404 STGYSPSQPGYSPSST--SQYTP 342 S YSPS P YSP+S S Y+P Sbjct: 1874 SPKYSPSSPTYSPTSPKGSTYSP 1896 Score = 107 bits (267), Expect = 7e-22 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP SP YSP SPSYSP+SP YSPTSPSYSP+SP+YSP+SP S +SP YSP+SP +SP Sbjct: 1779 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPT 1838 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSPS P YSP+S + Y+P Sbjct: 1839 SPKYSPSSPKYSPTSPT-YSP 1858 Score = 100 bits (250), Expect = 6e-20 Identities = 55/97 (56%), Positives = 66/97 (68%), Gaps = 9/97 (9%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSPTSPSYSP+SP YSP+SP+YSP+SP S SP YSP Sbjct: 1730 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPG 1789 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP +SPS+ YSP+ P YSP+S S N + P Sbjct: 1790 SPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSP 1826 Score = 99.4 bits (246), Expect = 2e-19 Identities = 53/85 (62%), Positives = 61/85 (71%), Gaps = 8/85 (9%) Frame = -2 Query: 572 PSSP-YSPTSPSY------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 P SP YSP SPSY +P SP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP Sbjct: 1586 PMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPS 1645 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S YSP+ P YSP+S S Y+P Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPS-YSP 1669 Score = 77.8 bits (190), Expect = 6e-13 Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPTSPSYS-PTSPSYSPSSPTY---SPSSPYNSG---TSPDYS 429 +SP+ P SP SP+ SP PS + P SPSYSP+SP+Y SP++P + G TSP YS Sbjct: 1560 YSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYS 1619 Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1620 PTSPGYSPASPSYSPTSPSYSPTSPS-YSP 1648 Score = 73.6 bits (179), Expect = 1e-11 Identities = 48/90 (53%), Positives = 59/90 (65%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSPYSPT-SPS-YSPTSPSYS--------PTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 FSP+ YSP SP SP SP+ S P SPSYSP+SP+Y P+SP + SP YS Sbjct: 1556 FSPA--YSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASP-ATPQSPGYS 1612 Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P+SP +SP S GYSP+ P YSP+S S Y+P Sbjct: 1613 PTSPSYSPTSPGYSPASPSYSPTSPS-YSP 1641 Score = 60.8 bits (146), Expect = 7e-08 Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 4/38 (10%) Frame = -2 Query: 581 RFSPSSP-YSPTSP---SYSPTSPSYSPTSPSYSPSSP 480 ++SPSSP YSPTSP +YSPTSPSYSPTSPSYSP+SP Sbjct: 1876 KYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTSP 1913 [33][TOP] >UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum RepID=UPI0000D5670C Length = 2007 Score = 118 bits (296), Expect = 3e-25 Identities = 60/81 (74%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P+SP S TSP YSPSSPQ+SP Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPA 1770 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S +SPS P YSP+S S Y+P Sbjct: 1771 SPSFSPSSPKYSPTSPS-YSP 1790 Score = 117 bits (294), Expect = 5e-25 Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1721 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP+S S Y+P + Sbjct: 1722 SPSYSPTSPSYSPTSPS-YSPSS 1743 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1613 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1673 SPSYSPTSPSYSPTSPS-YSP 1692 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1679 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1680 SPSYSPTSPSYSPTSPS-YSP 1699 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1701 SPSYSPTSPSYSPTSPS-YSP 1720 Score = 117 bits (292), Expect = 8e-25 Identities = 59/88 (67%), Positives = 69/88 (78%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1742 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + YSP+ P YSPSS QY+P Sbjct: 1743 SPRYTPASPSYSPTSPSYSPSS-PQYSP 1769 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1606 YSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1665 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1666 SPSYSPTSPSYSPTSPS-YSP 1685 Score = 111 bits (278), Expect = 4e-23 Identities = 56/88 (63%), Positives = 66/88 (75%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 F P+SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+ Sbjct: 1592 FQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1652 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1678 Score = 108 bits (271), Expect = 2e-22 Identities = 49/83 (59%), Positives = 68/83 (81%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP YSP SPS+SP+SP YSP+SP+YSP+SP +G SP YSP+SP +SP Sbjct: 1753 YSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPT 1812 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P ++P+++S+Y+P + Sbjct: 1813 SPNYSPSSPQHTPAASSRYSPSS 1835 Score = 108 bits (270), Expect = 3e-22 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 3/83 (3%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP +SP+SP YSPTSPSYSPTSPS++ SP YSP+SP S TSP+YSPSSPQ +P Sbjct: 1766 QYSPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTP 1825 Query: 404 --STGYSPSQPGYSPSSTSQYTP 342 S+ YSPS P YSPSS S Y+P Sbjct: 1826 AASSRYSPSSPNYSPSSPS-YSP 1847 Score = 105 bits (263), Expect = 2e-21 Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP + PTSPS +P SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1585 YSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1644 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1645 SPSYSPTSPSYSPTSPS-YSP 1664 Score = 104 bits (260), Expect = 4e-21 Identities = 55/95 (57%), Positives = 65/95 (68%), Gaps = 16/95 (16%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SPSYSPTSPSYSPSSP YSP+SP S +SP YSP+SP +SP Sbjct: 1732 YSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPT 1791 Query: 404 --------------STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPSS Q+TP Sbjct: 1792 SPSFAGGSPQYSPTSPSYSPTSPNYSPSS-PQHTP 1825 Score = 102 bits (255), Expect = 2e-20 Identities = 60/96 (62%), Positives = 67/96 (69%), Gaps = 17/96 (17%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYN--------SG 447 FSPSSP YSPTSPSYSPTSPS YSPTSPSYSP+SP YSPSSP + S Sbjct: 1774 FSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAASSRYSP 1833 Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP+YSPSSP +SP S YSP YSP+S + YTP Sbjct: 1834 SSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPT-YTP 1868 Score = 99.4 bits (246), Expect = 2e-19 Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YSP+SPS+ PTSPS +P SP YSP+SP YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1582 SPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 1641 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1642 SPTSPSYSPTSPS-YSP 1657 Score = 97.4 bits (241), Expect = 7e-19 Identities = 50/89 (56%), Positives = 59/89 (66%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 +SPSSP YSP+SP+YSP+SPSYSPTSP YSP S YSP+SP + TSP YSP Sbjct: 1816 YSPSSPQHTPAASSRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSP 1875 Query: 425 SSPQFSPS-TGYSPSQPGYSPSSTSQYTP 342 +SP +S YSPS P YSP+S P Sbjct: 1876 ASPAYSSQPPRYSPSSPSYSPTSPITLPP 1904 Score = 94.7 bits (234), Expect = 5e-18 Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 2/85 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SPSSP YSPTSP YSP S YSPTSP+Y+P+SP+YSP+SP S P YSPSSP +SP+ Sbjct: 1838 YSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPT 1897 Query: 401 TGYS-PSQPGYSPSSTSQYTPKTND 330 + + P P YS SS S YT + D Sbjct: 1898 SPITLPPSPYYSRSS-STYTFSSRD 1921 Score = 81.6 bits (200), Expect = 4e-14 Identities = 43/80 (53%), Positives = 55/80 (68%), Gaps = 8/80 (10%) Frame = -2 Query: 557 SPTSPSYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +P SP+ SP SPSYSP+SPS+ P+SP+ +P SP S TSP YSP+SP +SP S Sbjct: 1565 TPQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTS 1624 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1625 PSYSPTSPSYSPTSPS-YSP 1643 Score = 77.0 bits (188), Expect = 1e-12 Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 17/108 (15%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYNSGTSP---- 438 ++SP+SP Y+PTSPSYSP SP+YS P+SPSYSP+SP P SPY S +S Sbjct: 1858 KYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTSPITLPPSPYYSRSSSTYTF 1917 Query: 437 ---DYSPSSPQFSPSTGYSP--SQPGYSPSSTSQYTPKTNDNKDDPGT 309 DY+ SSP +SP+ + P YSP+ + N N+ + T Sbjct: 1918 SSRDYTYSSPPYSPTIPQDEMFTSPVYSPTIPKYFRSDINRNRTESPT 1965 Score = 69.7 bits (169), Expect = 2e-10 Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSY-----SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 FSPS S S SP Y +P SP+ SP S SP+YSPSSP TSP +P S Sbjct: 1544 FSPSAASDASGMSPGYGAWSPTPQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVS 1603 Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTP 342 P +SP S GYSP+ P YSP+S S Y+P Sbjct: 1604 PGYSPTSPGYSPTSPNYSPTSPS-YSP 1629 Score = 63.9 bits (154), Expect = 9e-09 Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 16/91 (17%) Frame = -2 Query: 566 SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 S +P P++SP+ SP Y SP+ P SP SP G SP YSPSSP F Sbjct: 1535 SGMTPGGPAFSPSAASDASGMSPGYGAWSPT--PQSPAMSPFMASPHGQSPSYSPSSPSF 1592 Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342 P S GYSP+ PGYSP+S + Y+P Sbjct: 1593 QPTSPSMTPVSPGYSPTSPGYSPTSPN-YSP 1622 [34][TOP] >UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii CBS767 RepID=UPI00003BD271 Length = 1749 Score = 118 bits (296), Expect = 3e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1687 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1688 SPQYSPTSPSYSPTSPS-YSP 1707 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1572 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1631 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1632 SPSYSPTSPSYSPTSPS-YSP 1651 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1593 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1674 SPSYSPTSPQYSPTS-PQYSP 1693 Score = 115 bits (289), Expect = 2e-24 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPT 1708 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1709 SPQYSPTSPQYSPTS-PQYSP 1728 Score = 112 bits (281), Expect = 2e-23 Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1555 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1614 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1615 SPTSPSYSPTSPS-YSP 1630 Score = 107 bits (267), Expect = 7e-22 Identities = 56/88 (63%), Positives = 63/88 (71%), Gaps = 1/88 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ Sbjct: 1670 YSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQ---- 1725 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 YSP P YSP S S K+ D K D Sbjct: 1726 --YSPGSPLYSPESES----KSKDEKKD 1747 Score = 106 bits (264), Expect = 1e-21 Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S Y TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1548 SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1607 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1608 SPTSPSYSPTSPS-YSP 1623 Score = 100 bits (248), Expect = 1e-19 Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 11/89 (12%) Frame = -2 Query: 575 SPSSPYS----------PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 SP+SP+S TSP Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP Sbjct: 1529 SPTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1588 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1589 TSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1616 [35][TOP] >UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis RepID=Q6CL79_KLULA Length = 1720 Score = 118 bits (296), Expect = 3e-25 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1543 FSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1602 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1603 SPSYSPTSPSYSPTSPS-YSP 1622 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1609 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1610 SPSYSPTSPSYSPTSPS-YSP 1629 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1571 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1592 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1652 SPSYSPTSPSYSPTSPS-YSP 1671 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1673 SPSYSPTSPSYSPTSPS-YSP 1692 Score = 111 bits (277), Expect = 5e-23 Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 1/88 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP----- 1688 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 YSP+ P YSP S S PK ++ ++ Sbjct: 1689 -SYSPTSPQYSPGSYSPAEPKQQESDEE 1715 Score = 110 bits (274), Expect = 1e-22 Identities = 55/78 (70%), Positives = 64/78 (82%), Gaps = 2/78 (2%) Frame = -2 Query: 569 SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396 SSP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1539 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598 Query: 395 YSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1599 YSPTSPSYSPTSPS-YSP 1615 [36][TOP] >UniRef100_O94231 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kluyveromyces lactis RepID=O94231_KLULA Length = 414 Score = 118 bits (296), Expect = 3e-25 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 237 FSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 296 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 297 SPSYSPTSPSYSPTSPS-YSP 316 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 244 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 303 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 304 SPSYSPTSPSYSPTSPS-YSP 323 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 265 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 324 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 325 SPSYSPTSPSYSPTSPS-YSP 344 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 286 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 345 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 346 SPSYSPTSPSYSPTSPS-YSP 365 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 307 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 366 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 367 SPSYSPTSPSYSPTSPS-YSP 386 Score = 111 bits (277), Expect = 5e-23 Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 1/88 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP Sbjct: 328 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP----- 382 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 YSP+ P YSP S S PK ++ ++ Sbjct: 383 -SYSPTSPQYSPGSYSPAEPKQQESDEE 409 Score = 110 bits (274), Expect = 1e-22 Identities = 55/78 (70%), Positives = 64/78 (82%), Gaps = 2/78 (2%) Frame = -2 Query: 569 SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396 SSP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 233 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 292 Query: 395 YSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 293 YSPTSPSYSPTSPS-YSP 309 [37][TOP] >UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5E245_LACTC Length = 1740 Score = 118 bits (296), Expect = 3e-25 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1544 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1603 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1604 SPSYSPTSPSYSPTSPS-YSP 1623 Score = 118 bits (296), Expect = 3e-25 Identities = 57/89 (64%), Positives = 68/89 (76%), Gaps = 2/89 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 S YSP P YSP S + N+N ++ Sbjct: 1709 SPSYSPGSPSYSPGSPKKENDNDNNNNNN 1737 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1565 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1624 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1625 SPSYSPTSPSYSPTSPS-YSP 1644 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1586 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1645 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1646 SPSYSPTSPSYSPTSPS-YSP 1665 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1607 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707 Score = 109 bits (273), Expect = 1e-22 Identities = 53/77 (68%), Positives = 63/77 (81%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S +SPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1541 SPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1600 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1601 SPTSPSYSPTSPS-YSP 1616 Score = 66.2 bits (160), Expect = 2e-09 Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 2/78 (2%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPT-SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396 SSP+S + PTSP + SP +SP+SP YSP TSP YSP+SP +SP S Sbjct: 1521 SSPFSGYGDA--PTSPGFGGVASPGFSPTSPAYSP-------TSPSYSPTSPSYSPTSPS 1571 Query: 395 YSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1572 YSPTSPSYSPTSPS-YSP 1588 [38][TOP] >UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JYP8_SCHJY Length = 1748 Score = 118 bits (296), Expect = 3e-25 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1555 YSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1614 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1615 SPSYSPTSPSYSPTSPS-YSP 1634 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1576 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1635 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1636 SPSYSPTSPSYSPTSPS-YSP 1655 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1597 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1657 SPSYSPTSPSYSPTSPS-YSP 1676 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1618 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1677 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1678 SPSYSPTSPSYSPTSPS-YSP 1697 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSPSSP YSP+SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1548 FSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1607 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1608 SPSYSPTSPSYSPTSPS-YSP 1627 Score = 111 bits (277), Expect = 5e-23 Identities = 58/94 (61%), Positives = 68/94 (72%), Gaps = 15/94 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPG 1705 Query: 404 -------------STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1706 HSAQNAQGRMSPRSPVYSPTSPSYSPTSPS-YSP 1738 Score = 107 bits (267), Expect = 7e-22 Identities = 53/78 (67%), Positives = 65/78 (83%), Gaps = 2/78 (2%) Frame = -2 Query: 569 SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396 SSP +SP+SPSYSP+SP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1544 SSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1603 Query: 395 YSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1604 YSPTSPSYSPTSPS-YSP 1620 Score = 106 bits (264), Expect = 1e-21 Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684 Query: 404 STGYSPSQP---GYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P SPS + ++ + + P Sbjct: 1685 SPSYSPTSPSYSPTSPSYSPGHSAQNAQGRMSP 1717 Score = 95.1 bits (235), Expect = 3e-18 Identities = 51/86 (59%), Positives = 58/86 (67%), Gaps = 14/86 (16%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS-------------SPYNSGTS 441 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP SP S TS Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGHSAQNAQGRMSPRSPVYSPTS 1726 Query: 440 PDYSPSSPQFSPSTGYSPSQPGYSPS 363 P YSP+SP YSP+ P YSP+ Sbjct: 1727 PSYSPTSP------SYSPTSPRYSPN 1746 Score = 87.4 bits (215), Expect = 7e-16 Identities = 43/70 (61%), Positives = 52/70 (74%), Gaps = 1/70 (1%) Frame = -2 Query: 548 SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 372 SP +SP +SP+SPSYSPSSP YSP+SP S TSP YSP+SP +SP S YSP+ P Y Sbjct: 1538 SPFSGASSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1597 Query: 371 SPSSTSQYTP 342 SP+S S Y+P Sbjct: 1598 SPTSPS-YSP 1606 Score = 80.9 bits (198), Expect = 7e-14 Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 +SPY + S SP +SP +SPSSP+YSPSSP S TSP YSP+SP +SP S Y Sbjct: 1524 ASPYGADARSPGYMSPFSGASSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSY 1583 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1584 SPTSPSYSPTSPS-YSP 1599 [39][TOP] >UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii RepID=B5RSM9_DEBHA Length = 1749 Score = 118 bits (296), Expect = 3e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1687 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1688 SPQYSPTSPSYSPTSPS-YSP 1707 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1572 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1631 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1632 SPSYSPTSPSYSPTSPS-YSP 1651 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1593 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1674 SPSYSPTSPQYSPTS-PQYSP 1693 Score = 115 bits (289), Expect = 2e-24 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPT 1708 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1709 SPQYSPTSPQYSPTS-PQYSP 1728 Score = 112 bits (281), Expect = 2e-23 Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1555 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1614 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1615 SPTSPSYSPTSPS-YSP 1630 Score = 108 bits (271), Expect = 2e-22 Identities = 56/88 (63%), Positives = 63/88 (71%), Gaps = 1/88 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ Sbjct: 1670 YSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQ---- 1725 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 YSP P YSP S S K+ D K D Sbjct: 1726 --YSPGSPSYSPESES----KSKDEKKD 1747 Score = 106 bits (264), Expect = 1e-21 Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S Y TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1548 SPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1607 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1608 SPTSPSYSPTSPS-YSP 1623 Score = 100 bits (248), Expect = 1e-19 Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 11/89 (12%) Frame = -2 Query: 575 SPSSPYS----------PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 SP+SP+S TSP Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP Sbjct: 1529 SPTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1588 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1589 TSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1616 [40][TOP] >UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii RepID=A1YIA7_ISSOR Length = 1647 Score = 118 bits (296), Expect = 3e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1526 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPT 1585 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1586 SPQYSPTSPQYSPTS-PQYSP 1605 Score = 118 bits (295), Expect = 4e-25 Identities = 59/81 (72%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1519 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1578 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1579 SPQYSPTSPQYSPTS-PQYSP 1598 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1512 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1571 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1572 SPQYSPTSPQYSPTS-PQYSP 1591 Score = 114 bits (286), Expect = 4e-24 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1547 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1606 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1607 SPQYSPTSPQYSPTS-PQYSP 1626 Score = 114 bits (284), Expect = 7e-24 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1505 YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1564 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1565 SPQYSPTSPQYSPTS-PQYSP 1584 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1484 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1543 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1544 SPSYSPTSPSYSPTSPS-YSP 1563 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1498 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1557 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1558 SPSYSPTSPQYSPTS-PQYSP 1577 Score = 113 bits (282), Expect = 1e-23 Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1567 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1626 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1627 TSPQYSPTSPQYSPTSPS-YSP 1647 Score = 112 bits (281), Expect = 2e-23 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1477 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPT 1536 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1537 SPSYSPTSPSYSPTSPS-YSP 1556 Score = 110 bits (276), Expect = 6e-23 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 + P+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1470 YGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1529 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1530 SPSYSPTSPSYSPTSPS-YSP 1549 Score = 110 bits (275), Expect = 8e-23 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 + P+SP Y PTSPSYSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1463 YGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1522 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1523 SPAYSPTSPSYSPTSPS-YSP 1542 Score = 107 bits (266), Expect = 9e-22 Identities = 52/77 (67%), Positives = 60/77 (77%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S Y PTSPSY PTSPSYSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1460 SPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1519 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1520 SPTSPAYSPTSPS-YSP 1535 Score = 105 bits (261), Expect = 3e-21 Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 3/82 (3%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 + P+SP Y TSPSY PTSPSY PTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1448 YQPTSPFGYGATSPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1507 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1508 TSPAYSPTSPAYSPTSPA-YSP 1528 [41][TOP] >UniRef100_Q99366 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max RepID=Q99366_SOYBN Length = 625 Score = 118 bits (295), Expect = 4e-25 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 461 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 520 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S GYSP+ P YSP+S S Y+P Sbjct: 521 SPGYSPTSPSYSPTSPS-YSP 540 Score = 117 bits (293), Expect = 6e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 454 YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 513 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ PGYSP+S S Y+P Sbjct: 514 SPAYSPTSPGYSPTSPS-YSP 533 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 405 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 464 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 465 SPAYSPTSPAYSPTSPS-YSP 484 Score = 116 bits (290), Expect = 1e-24 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 412 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPT 471 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 472 SPAYSPTSPSYSPTSPS-YSP 491 Score = 115 bits (289), Expect = 2e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 433 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 492 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 493 SPSYSPTSPSYSPTSPS-YSP 512 Score = 115 bits (288), Expect = 2e-24 Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 475 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 534 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P Y+P S ++Y+P + P Sbjct: 535 SPSYSPTSPSYNPQS-AKYSPSLAYSPSSP 563 Score = 114 bits (285), Expect = 5e-24 Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP YSPTSP YSPTSP+YSPSSP YSP+SP S TSP YSP+SP +SP Sbjct: 377 YSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPT 436 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 437 SPSYSPTSPSYSPTSPS-YSP 456 Score = 114 bits (284), Expect = 7e-24 Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSP+SP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP Sbjct: 370 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 429 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 430 SPSYSPTSPSYSPTSPS-YSP 449 Score = 112 bits (279), Expect = 3e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 398 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 457 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 458 SPAYSPTSPAYSPTSPA-YSP 477 Score = 111 bits (278), Expect = 4e-23 Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+P S ++SPS Sbjct: 496 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 555 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSPS P SPS S Y+P Sbjct: 556 LAYSPSSPRLSPS--SPYSP 573 Score = 105 bits (263), Expect = 2e-21 Identities = 59/89 (66%), Positives = 64/89 (71%), Gaps = 15/89 (16%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSY-------------SPSSPTYSPSSPYNSGTS 441 +SP+SP YSPTSPSYSPTSPSYSPTSPSY SPSSP SPSSPY S TS Sbjct: 517 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPY-SPTS 575 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSST 357 P+YSP+SP +SP S YSPS P YSPS T Sbjct: 576 PNYSPTSPSYSPTSPSYSPSSPTYSPSRT 604 Score = 103 bits (258), Expect = 7e-21 Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 3/82 (3%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 FSP+S YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S +SP YSP+SP +SP Sbjct: 362 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 421 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 422 TSPSYSPTSPSYSPTSPS-YSP 442 Score = 89.7 bits (221), Expect = 1e-16 Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 12/90 (13%) Frame = -2 Query: 575 SPSSPYSPTSPS----------YSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 SP+ SPT+ + +SPTS P YSP+SP YSPSSP YSP+SP S TSP YS Sbjct: 340 SPNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYS 399 Query: 428 PSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 P+SP +SPS+ GYSP+ P YSP+S S Y+P Sbjct: 400 PTSPTYSPSSPGYSPTSPAYSPTSPS-YSP 428 Score = 82.4 bits (202), Expect = 2e-14 Identities = 37/39 (94%), Positives = 38/39 (97%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS 465 R SPSSPYSPTSP+YSPTSPSYSPTSPSYSPSSPTYSPS Sbjct: 564 RLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 602 Score = 79.0 bits (193), Expect = 3e-13 Identities = 49/89 (55%), Positives = 58/89 (65%), Gaps = 9/89 (10%) Frame = -2 Query: 581 RFSP---SSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPT----YSPSSPYNSGTSPDYSP 426 +FSP +SPTS P YSP+SP YSP+SP YS YSP+SP S TSP YSP Sbjct: 352 QFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYS----PTSPGYSPTSPGYSPTSPTYSP 407 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SSP +SP S YSP+ P YSP+S S Y+P Sbjct: 408 SSPGYSPTSPAYSPTSPSYSPTSPS-YSP 435 Score = 69.7 bits (169), Expect = 2e-10 Identities = 36/59 (61%), Positives = 42/59 (71%), Gaps = 6/59 (10%) Frame = -2 Query: 581 RFSPSSPYSPTSPS------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++SPS YSP+SP YSPTSP+YSPTSPSYSP+SP+YSPS SP YSPS Sbjct: 551 KYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPS-------SPTYSPS 602 Score = 58.5 bits (140), Expect = 4e-07 Identities = 42/85 (49%), Positives = 50/85 (58%), Gaps = 7/85 (8%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPT--SPSYSP-SSPTYSPSSPYNSG---TSPDYSPSSPQ 414 SPS SP T +SP ++SP SSP YSPSSP G +SP YSP+SP Sbjct: 334 SPSYLLSPNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSP---GYSPSSPGYSPTSPG 390 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S GYSP+ P YSPSS Y+P Sbjct: 391 YSPTSPGYSPTSPTYSPSSPG-YSP 414 Score = 58.2 bits (139), Expect = 5e-07 Identities = 39/92 (42%), Positives = 47/92 (51%), Gaps = 7/92 (7%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG------TSPDYSPSSPQFSP 405 SP S T SPSY SP+ S T + SPY G +SP YSPSSP +SP Sbjct: 321 SPISGTPYHEGLMSPSYL-LSPNLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSPGYSP 379 Query: 404 ST-GYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 S+ GYSP+ PGYSP+S + PG Sbjct: 380 SSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG 411 [42][TOP] >UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum RepID=Q30BD9_9EUKA Length = 1852 Score = 118 bits (295), Expect = 4e-25 Identities = 62/87 (71%), Positives = 68/87 (78%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPS SPTSPSYSPTSPSYSP+SP+YSPSSP S SP YSPSSP +SPS Sbjct: 1700 YSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPS 1759 Query: 401 T-GYSPSQPGYSPSSTS------QYTP 342 + YSPS P YSPSS S QYTP Sbjct: 1760 SPSYSPSSPSYSPSSPSYSPSSPQYTP 1786 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1602 YSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPT 1661 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S GYSP+ P YSP+S S Y+P Sbjct: 1662 SPGYSPTSPSYSPTSPS-YSP 1681 Score = 115 bits (287), Expect = 3e-24 Identities = 59/89 (66%), Positives = 68/89 (76%), Gaps = 9/89 (10%) Frame = -2 Query: 581 RFSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 R+SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP Sbjct: 1573 RYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSP 1632 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1633 TSPSYSPTSPRYSPTSPSYSPTSPS-YSP 1660 Score = 115 bits (287), Expect = 3e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1623 YSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPT 1682 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1683 SPSYSPTSPSYSPTSPS-YSP 1702 Score = 114 bits (286), Expect = 4e-24 Identities = 55/77 (71%), Positives = 64/77 (83%), Gaps = 2/77 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1637 YSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1696 Query: 404 STGYSPSQPGYSPSSTS 354 S YSP+ P YSP+S S Sbjct: 1697 SPSYSPTSPSYSPTSPS 1713 Score = 114 bits (285), Expect = 5e-24 Identities = 57/82 (69%), Positives = 67/82 (81%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R+SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1643 RYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1702 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P SP+S S Y+P Sbjct: 1703 TSPSYSPTSPSCSPTSPS-YSP 1723 Score = 114 bits (284), Expect = 7e-24 Identities = 56/77 (72%), Positives = 64/77 (83%), Gaps = 2/77 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP SP+SP +SP Sbjct: 1665 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPT 1724 Query: 404 STGYSPSQPGYSPSSTS 354 S YSP+ P YSPSS S Sbjct: 1725 SPSYSPTSPSYSPSSPS 1741 Score = 114 bits (284), Expect = 7e-24 Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1672 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPT 1731 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P SP+S + Y+P + Sbjct: 1732 SPSYSPSSPSCSPASPT-YSPSS 1753 Score = 112 bits (281), Expect = 2e-23 Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 SP+SP YSPTSPSYSPTSPSYSP+SPS SP+SPTYSPSSP S +SP YSPSSP +SPS+ Sbjct: 1715 SPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSS 1774 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSPS P Y+P+S + Y+P Sbjct: 1775 PSYSPSSPQYTPAS-ANYSP 1793 Score = 108 bits (271), Expect = 2e-22 Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTSP YS +SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+ Sbjct: 1560 YSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1619 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S GYSP+ P YSP+S +Y+P Sbjct: 1620 SPSYSPTSPGYSPTSPSYSPTS-PRYSP 1646 Score = 107 bits (267), Expect = 7e-22 Identities = 61/90 (67%), Positives = 68/90 (75%), Gaps = 9/90 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP +YSP+SP S TSP YSPS Sbjct: 1679 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPS 1738 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 SP SP S YSPS P YSPSS S Y+P + Sbjct: 1739 SPSCSPASPTYSPSSPSYSPSSPS-YSPSS 1767 Score = 103 bits (258), Expect = 7e-21 Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 13/95 (13%) Frame = -2 Query: 578 FSPSSPY-SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP-------- 426 +SPSSP SP SP+YSP+SPSYSP+SPSYSPSSP+YSPSSP S +SP Y+P Sbjct: 1735 YSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPASANYSPP 1794 Query: 425 ----SSPQFSPSTGYSPSQPGYSPSSTSQYTPKTN 333 SSP +SP++ YSP+ P Y SS + YTP++N Sbjct: 1795 SPLHSSPAYSPTSQYSPTSPAYGASSPA-YTPQSN 1828 Score = 101 bits (251), Expect = 5e-20 Identities = 51/87 (58%), Positives = 60/87 (68%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-- 405 ++ S YSP SPSYS SP YSPTSP YS SSP+YSP+SP S TSP YSP+SP +SP Sbjct: 1554 YAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1613 Query: 404 ------STGYSPSQPGYSPSSTSQYTP 342 S YSP+ PGYSP+S S Y+P Sbjct: 1614 PAYSPTSPSYSPTSPGYSPTSPS-YSP 1639 Score = 96.7 bits (239), Expect = 1e-18 Identities = 50/98 (51%), Positives = 61/98 (62%), Gaps = 9/98 (9%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSP--------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 FSP YSP+SP YSP SPSYSP SPSYS +SP YSP+SP S +SP YSP+ Sbjct: 1532 FSPHRGYSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPT 1591 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 SP +SP S YSP+ P YSP+S + + + PG Sbjct: 1592 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPG 1629 Score = 60.5 bits (145), Expect = 9e-08 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 2/62 (3%) Frame = -2 Query: 521 SYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQY 348 S+SP YSPSSP YSP SP ++ SP YSP+SP +S S YSP+ PGYS SS S Y Sbjct: 1531 SFSPHR-GYSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPS-Y 1588 Query: 347 TP 342 +P Sbjct: 1589 SP 1590 Score = 60.1 bits (144), Expect = 1e-07 Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SPSSP Y+P S +YSP SP + SSP YSP+S Y S TSP Y SSP ++P Sbjct: 1777 YSPSSPQYTPASANYSPPSPLH---------SSPAYSPTSQY-SPTSPAYGASSPAYTPQ 1826 Query: 401 TGYSP-SQPGYSPSSTSQYTP 342 + SP S P + S SQ +P Sbjct: 1827 SNLSPASLPSPALSPVSQKSP 1847 [43][TOP] >UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NVN7_VITVI Length = 1010 Score = 118 bits (295), Expect = 4e-25 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 892 YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 951 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S GYSP+ P YSP+S S Y+P Sbjct: 952 SPGYSPTSPSYSPTSPS-YSP 971 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 843 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPT 902 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 903 SPAYSPTSPSYSPTSPS-YSP 922 Score = 117 bits (293), Expect = 6e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 885 YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 944 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ PGYSP+S S Y+P Sbjct: 945 SPAYSPTSPGYSPTSPS-YSP 964 Score = 117 bits (292), Expect = 8e-25 Identities = 58/90 (64%), Positives = 71/90 (78%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 906 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 965 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P Y+PSS ++Y+P + P Sbjct: 966 SPSYSPTSPSYNPSS-AKYSPSLAYSPSSP 994 Score = 115 bits (288), Expect = 2e-24 Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP Sbjct: 787 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 846 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 847 SPSYSPTSPSYSPTSPS-YSP 866 Score = 115 bits (288), Expect = 2e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 829 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 888 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 889 SPSYSPTSPAYSPTSPA-YSP 908 Score = 115 bits (287), Expect = 3e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 822 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 881 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 882 SPVYSPTSPSYSPTSPA-YSP 901 Score = 114 bits (286), Expect = 4e-24 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 864 YSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 923 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 924 SPSYSPTSPSYSPTSPS-YSP 943 Score = 113 bits (282), Expect = 1e-23 Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSP+YSPTSP YSP+SP+YSP+SP S TSP Y+PSS ++SPS Sbjct: 927 YSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPS 986 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSPS P SPS S Y+P Sbjct: 987 LAYSPSSPRLSPS--SPYSP 1004 Score = 112 bits (279), Expect = 3e-23 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 815 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 874 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 875 SPSYSPTSPVYSPTSPS-YSP 894 Score = 109 bits (273), Expect = 1e-22 Identities = 51/75 (68%), Positives = 63/75 (84%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 808 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 867 Query: 404 STGYSPSQPGYSPSS 360 S YSP+ P YSP+S Sbjct: 868 SPSYSPTSPSYSPTS 882 Score = 105 bits (263), Expect = 2e-21 Identities = 54/82 (65%), Positives = 63/82 (76%), Gaps = 3/82 (3%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 FSP+S YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP Sbjct: 772 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 831 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 832 TSPAYSPTSPSYSPTSPS-YSP 852 Score = 87.4 bits (215), Expect = 7e-16 Identities = 47/70 (67%), Positives = 52/70 (74%), Gaps = 1/70 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSY+PSS YSPS Y S +SP SPSSP Sbjct: 948 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAY-SPSSPRLSPSSP----- 1001 Query: 401 TGYSPSQPGY 372 YSP+ P Y Sbjct: 1002 --YSPTSPNY 1009 Score = 87.0 bits (214), Expect = 9e-16 Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 2/69 (2%) Frame = -2 Query: 542 SYSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369 ++SPTS P YSP+SP YSPSSP YSP+SP S TSP YSP+SP +SP S YSPS PGYS Sbjct: 771 AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 830 Query: 368 PSSTSQYTP 342 P+S + Y+P Sbjct: 831 PTSPA-YSP 838 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 54/87 (62%), Gaps = 7/87 (8%) Frame = -2 Query: 575 SPSSPYSP-TSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQ 414 SP+ SP T +SP ++SPTS SP YSPSSP G +SP YSP+SP Sbjct: 750 SPNLRLSPITDAQFSPYVGGMAFSPTS------SPGYSPSSP---GYSPSSPGYSPTSPG 800 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKT 336 +SP S GYSP+ PGYSP+S + Y+P + Sbjct: 801 YSPTSPGYSPTSPGYSPTSPT-YSPSS 826 [44][TOP] >UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=Q5ACI7_CANAL Length = 1728 Score = 118 bits (295), Expect = 4e-25 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1606 YSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPT 1665 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1666 SPSYSPTSPQYSPTSPS-YSP 1685 Score = 118 bits (295), Expect = 4e-25 Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1634 YSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1693 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S QY+P + + +P Sbjct: 1694 SPQYSPTSPQYSPTS-PQYSPGSPGYEPEP 1722 Score = 115 bits (288), Expect = 2e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1599 YSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1658 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1659 SPQYSPTSPSYSPTS-PQYSP 1678 Score = 114 bits (286), Expect = 4e-24 Identities = 58/88 (65%), Positives = 69/88 (78%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1679 Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1680 SPSYSPTSPQYSPTSPQYSPTS-PQYSP 1706 Score = 114 bits (285), Expect = 5e-24 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSY+PTSP+YSPTSPSY+P+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1557 YAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPT 1616 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1617 SPSYSPTSPSYSPTSPS-YSP 1636 Score = 114 bits (285), Expect = 5e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1592 YSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1651 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1652 SPSYSPTSPQYSPTSPS-YSP 1671 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1585 YAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1644 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1645 SPSYSPTSPSYSPTS-PQYSP 1664 Score = 113 bits (282), Expect = 1e-23 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP Y+PTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1578 YSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPT 1637 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1638 SPAYSPTSPSYSPTSPS-YSP 1657 Score = 110 bits (274), Expect = 1e-22 Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 SP YSPTSPSYSPTSPSY+PTSP+YSP+SP+Y+P+SP S TSP Y+P+SP +SP S Sbjct: 1538 SPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSP 1597 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S QY+P Sbjct: 1598 AYSPTSPSYSPTS-PQYSP 1615 Score = 102 bits (253), Expect = 3e-20 Identities = 56/93 (60%), Positives = 65/93 (69%), Gaps = 9/93 (9%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS P YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+ Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPT 1700 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDN 327 SPQ+SP S YSP PGY P PK ++N Sbjct: 1701 SPQYSPTSPQYSPGSPGYEPE-----PPKKDEN 1728 Score = 94.4 bits (233), Expect = 6e-18 Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S Y+ YSPTSPSYSPTSPSY+P+SP YSP+SP + TSP YSP+SP ++P S Y Sbjct: 1533 SPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAY 1592 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1593 SPTSPAYSPTSPS-YSP 1608 Score = 85.5 bits (210), Expect = 3e-15 Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 1/73 (1%) Frame = -2 Query: 557 SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 381 S TSP Y+ YSPTSPSYSP+SP+Y+P+SP S TSP Y+P+SP +SP S Y+P+ Sbjct: 1530 SITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTS 1589 Query: 380 PGYSPSSTSQYTP 342 P YSP+S + Y+P Sbjct: 1590 PAYSPTSPA-YSP 1601 [45][TOP] >UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=C4YN85_CANAL Length = 1742 Score = 118 bits (295), Expect = 4e-25 Identities = 59/81 (72%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1620 YSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPT 1679 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1680 SPSYSPTSPQYSPTSPS-YSP 1699 Score = 118 bits (295), Expect = 4e-25 Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1648 YSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1707 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S QY+P + + +P Sbjct: 1708 SPQYSPTSPQYSPTS-PQYSPGSPGYEPEP 1736 Score = 115 bits (288), Expect = 2e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1613 YSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1672 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1673 SPQYSPTSPSYSPTS-PQYSP 1692 Score = 114 bits (286), Expect = 4e-24 Identities = 58/88 (65%), Positives = 69/88 (78%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SPQ+SP Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPT 1693 Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1694 SPSYSPTSPQYSPTSPQYSPTS-PQYSP 1720 Score = 114 bits (285), Expect = 5e-24 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSY+PTSP+YSPTSPSY+P+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1571 YAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPT 1630 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650 Score = 114 bits (285), Expect = 5e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1606 YSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1665 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1666 SPSYSPTSPQYSPTSPS-YSP 1685 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1599 YAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1658 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1659 SPSYSPTSPSYSPTS-PQYSP 1678 Score = 113 bits (282), Expect = 1e-23 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP Y+PTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1592 YSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPT 1651 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1652 SPAYSPTSPSYSPTSPS-YSP 1671 Score = 109 bits (272), Expect = 2e-22 Identities = 53/81 (65%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSY+PTSP+YSPTSPSY+P+SP YSP+SP + TSP YSP+SP +SP Sbjct: 1557 YAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPT 1616 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1617 SPSYSPTSPQYSPTSPS-YSP 1636 Score = 107 bits (267), Expect = 7e-22 Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 SP YSPTSPSYSPTSPSY+PTSP+YSP+SP+Y+P+SP S TSP Y+P+SP +SP S Sbjct: 1538 SPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSP 1597 Query: 398 GYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S + Y+P Sbjct: 1598 SYAPTSPAYSPTSPA-YSP 1615 Score = 102 bits (253), Expect = 3e-20 Identities = 56/93 (60%), Positives = 65/93 (69%), Gaps = 9/93 (9%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS P YSPTSPSYSPTSP YSP+SP+YSP+SP S TSP YSP+ Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPT 1714 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDN 327 SPQ+SP S YSP PGY P PK ++N Sbjct: 1715 SPQYSPTSPQYSPGSPGYEPE-----PPKKDEN 1742 Score = 92.0 bits (227), Expect = 3e-17 Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S Y+ YSPTSPSYSPTSPSY+P+SP YSP+SP + TSP YSP+SP ++P S Y Sbjct: 1533 SPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAY 1592 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P Y+P+S + Y+P Sbjct: 1593 SPTSPSYAPTSPA-YSP 1608 Score = 86.3 bits (212), Expect = 2e-15 Identities = 42/73 (57%), Positives = 53/73 (72%), Gaps = 1/73 (1%) Frame = -2 Query: 557 SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQ 381 S TSP Y+ YSPTSPSYSP+SP+Y+P+SP S TSP Y+P+SP +SP S Y+P+ Sbjct: 1530 SITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTS 1589 Query: 380 PGYSPSSTSQYTP 342 P YSP+S S Y P Sbjct: 1590 PAYSPTSPS-YAP 1601 [46][TOP] >UniRef100_Q8SSC4 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Encephalitozoon cuniculi RepID=RPB1_ENCCU Length = 1599 Score = 118 bits (295), Expect = 4e-25 Identities = 59/82 (71%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1465 RLSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1524 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1525 TSPSYSPTSPSYSPTSPS-YSP 1545 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1487 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1546 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1547 SPSYSPTSPSYSPTSPS-YSP 1566 Score = 106 bits (265), Expect = 1e-21 Identities = 54/87 (62%), Positives = 64/87 (73%), Gaps = 1/87 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP Sbjct: 1508 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP----- 1562 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKD 321 YSP+ P YS S +S + N+D Sbjct: 1563 -SYSPTSPSYSVSMSSFSNKNKSKNQD 1588 Score = 80.9 bits (198), Expect = 7e-14 Identities = 49/109 (44%), Positives = 62/109 (56%), Gaps = 30/109 (27%) Frame = -2 Query: 578 FSPSSPYSP-----TSPSYSPTSP------------------------SYSPTSPSYSPS 486 F P+ P +P +S S+S +S SYSPTSPSYSP+ Sbjct: 1424 FKPNEPATPVISTPSSDSFSISSGNWSPTHLEMAYSRDLGERLSPTSPSYSPTSPSYSPT 1483 Query: 485 SPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP+YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1484 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1531 [47][TOP] >UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1 (RNA polymerase II subunit B1) (DNA-directed RNA polymerase II subunit A) (DNA-directed RNA polymerase III largest subunit) n=1 Tax=Equus caballus RepID=UPI0001796DD3 Length = 1834 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 112 bits (281), Expect = 2e-23 Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 2/91 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 S YSP+ P YSP++ S + + PG Sbjct: 1780 SPNYSPTSPSYSPTTPSYSPTSPSYSPTSPG 1810 Score = 112 bits (281), Expect = 2e-23 Identities = 53/81 (65%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP+YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP+ Sbjct: 1734 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPT 1793 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 T YSP+ P YSP+S Y+P Sbjct: 1794 TPSYSPTSPSYSPTSPG-YSP 1813 Score = 112 bits (281), Expect = 2e-23 Identities = 54/89 (60%), Positives = 68/89 (76%), Gaps = 2/89 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP++P +SP Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPT 1800 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 S YSP+ PGYSP+S + + DD Sbjct: 1801 SPSYSPTSPGYSPTSPTYSLTSPAISPDD 1829 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 100 bits (248), Expect = 1e-19 Identities = 47/78 (60%), Positives = 62/78 (79%), Gaps = 2/78 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSP+Y+PTSP+YSP+SP+YSP++P S TSP YSP+SP +SP Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSPTSPGYSPT 1814 Query: 404 STGYSPSQPGYSPSSTSQ 351 S YS + P SP + + Sbjct: 1815 SPTYSLTSPAISPDDSDE 1832 Score = 96.7 bits (239), Expect = 1e-18 Identities = 52/92 (56%), Positives = 68/92 (73%), Gaps = 6/92 (6%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSP----SSPYNSGTSPDYSPSSPQ 414 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP SP T+P YSP+SP Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP----TTPSYSPTSPS 1803 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTNDNKD 321 +SP S GYSP+ P YS +S + +P +D ++ Sbjct: 1804 YSPTSPGYSPTSPTYSLTSPA-ISPDDSDEEN 1834 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624 [48][TOP] >UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis domestica RepID=UPI0000F2BF13 Length = 1932 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1700 SPSYSPTSPNYSPTSPN-YTP 1719 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1591 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1651 SPSYSPTSPSYSPTSPS-YSP 1670 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1658 SPSYSPTSPSYSPTSPS-YSP 1677 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1679 SPSYSPTSPSYSPTSPS-YSP 1698 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1685 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1686 SPSYSPTSPSYSPTSPS-YSP 1705 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1720 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1721 SPSYSPTSPSYSPTSPN-YTP 1740 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1692 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1693 SPSYSPTSPSYSPTSPN-YSP 1712 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1654 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1713 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1714 SPNYTPTSPSYSPTSPS-YSP 1733 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1570 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1741 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1742 SPNYSPTSPSYSPTSPS-YSP 1761 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 1738 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1797 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1798 SPKYTPTSPSYSPSS-PEYTP 1817 Score = 113 bits (282), Expect = 1e-23 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP Sbjct: 1703 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1762 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P Y+P S + YTP + Sbjct: 1763 SPSYSPSSPRYTPQSPT-YTPSS 1784 Score = 112 bits (279), Expect = 3e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1710 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1769 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 1770 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1796 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1821 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1880 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1881 TSPKYSPTSPTYSPTSPKGSTYSP 1904 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1780 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1839 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1840 SPTYSPTTPKYSPTSPT-YSP 1859 Score = 108 bits (270), Expect = 3e-22 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 1772 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1831 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1832 TSPKYSPTSPTYSP-TTPKYSP 1852 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1808 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1867 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1868 SPKYSPTSPTYSPTS-PKYSP 1887 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1835 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1894 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1895 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1927 Score = 104 bits (260), Expect = 4e-21 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 1759 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1818 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1819 SPKYSPTSPKYSPTS-PKYSP 1838 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1800 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1859 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1860 TSPVYTPTSPKYSPTSPT-YSP 1880 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1539 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1598 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1599 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P Sbjct: 1717 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1776 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 1777 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1803 Score = 94.7 bits (234), Expect = 5e-18 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+ Sbjct: 1745 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1804 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ Y+P+ P YSP+S +Y+P Sbjct: 1805 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1831 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1849 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1908 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1909 YSPTSPTYSLTSPAISPDDSDE 1930 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1508 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1560 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1561 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1586 [49][TOP] >UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Monodelphis domestica RepID=UPI0000F2BF12 Length = 1970 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855 Score = 113 bits (282), Expect = 1e-23 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P Y+P S + YTP + Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822 Score = 112 bits (279), Expect = 3e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897 Score = 108 bits (270), Expect = 3e-22 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965 Score = 104 bits (260), Expect = 4e-21 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841 Score = 94.7 bits (234), Expect = 5e-18 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+ Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ Y+P+ P YSP+S +Y+P Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624 [50][TOP] >UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2 Length = 1970 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855 Score = 113 bits (282), Expect = 1e-23 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P Y+P S + YTP + Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822 Score = 112 bits (279), Expect = 3e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897 Score = 108 bits (270), Expect = 3e-22 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965 Score = 104 bits (260), Expect = 4e-21 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841 Score = 94.7 bits (234), Expect = 5e-18 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+ Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ Y+P+ P YSP+S +Y+P Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869 Score = 67.0 bits (162), Expect = 1e-09 Identities = 36/54 (66%), Positives = 42/54 (77%), Gaps = 4/54 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSP---SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SP+SP YSPTSP+YSPTSP +YSPTSP YSP+SPTYS +SP SPD S Sbjct: 1916 YSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISPDDS 1966 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624 [51][TOP] >UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide A isoform 13 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B22 Length = 1722 Score = 117 bits (294), Expect = 5e-25 Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1528 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1587 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S S N + P Sbjct: 1588 SPSYSPTSPSYSPTSPSYSPTSPNYSPSSP 1617 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1493 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1552 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1553 SPSYSPTSPSYSPTSPS-YSP 1572 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1500 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1559 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1560 SPSYSPTSPSYSPTSPS-YSP 1579 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1521 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1580 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1581 SPSYSPTSPSYSPTSPS-YSP 1600 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1542 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPSS +Y+P Sbjct: 1602 SPSYSPTSPNYSPSS-PKYSP 1621 Score = 117 bits (292), Expect = 8e-25 Identities = 58/83 (69%), Positives = 70/83 (84%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1615 Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336 + YSP+ P YSP+S + Y+P T Sbjct: 1616 SPKYSPTSPKYSPTSPT-YSPTT 1637 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 70/81 (86%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPSSP++SP Sbjct: 1563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPT 1622 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1623 SPKYSPTSPTYSP-TTPKYSP 1642 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1472 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1531 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1532 SPSYSPTSPSYSPTSPS-YSP 1551 Score = 111 bits (277), Expect = 5e-23 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPSSP YSP+SP S TSP YSP++P++SP Sbjct: 1584 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1643 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y+P+S +Y+P Sbjct: 1644 SPTYSPTSPVYTPTS-PKYSP 1663 Score = 110 bits (276), Expect = 6e-23 Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1612 YSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1671 Query: 404 STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1672 SPKYSPTSPTYSPTSPKGSTYSP 1694 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1625 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1684 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1685 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1717 Score = 105 bits (261), Expect = 3e-21 Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP YSPTSP YSPTSP+YSP++P YSP+SP S TSP Y+P+SP++SP Sbjct: 1605 YSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1664 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1665 SPTYSPTSPKYSPTSPT-YSP 1684 Score = 102 bits (254), Expect = 2e-20 Identities = 55/92 (59%), Positives = 62/92 (67%), Gaps = 16/92 (17%) Frame = -2 Query: 569 SSPYSPTS---------------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435 S YSPTS PSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1513 Query: 434 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1544 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1639 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1698 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1699 YSPTSPTYSLTSPAISPDDSDE 1720 [52][TOP] >UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio RepID=UPI0000546D90 Length = 1972 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1741 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1742 SPSYSPTSPSYSPTSPN-YTP 1761 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1633 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1692 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1693 SPSYSPTSPSYSPTSPS-YSP 1712 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1700 SPSYSPTSPSYSPTSPS-YSP 1719 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1720 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1721 SPSYSPTSPSYSPTSPS-YSP 1740 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1734 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1735 SPSYSPTSPSYSPTSPS-YSP 1754 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP Sbjct: 1710 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPT 1769 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1770 SPSYSPTSPSYSPTSPN-YTP 1789 Score = 116 bits (291), Expect = 1e-24 Identities = 56/83 (67%), Positives = 71/83 (85%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP+Y+PTSPSYSP+SP+YSP+SP S TSP+Y+P+SP +SP Sbjct: 1738 YSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1797 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSPSS +YTP++ Sbjct: 1798 SPSYSPTSPSYSPSS-PRYTPQS 1819 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1679 SPSYSPTSPSYSPTSPS-YSP 1698 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP ++P Sbjct: 1703 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPT 1762 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1763 SPSYSPTSPSYSPTSPS-YSP 1782 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1612 YTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1671 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691 Score = 113 bits (282), Expect = 1e-23 Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SPS Sbjct: 1752 YSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPS 1811 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 1812 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1838 Score = 112 bits (280), Expect = 2e-23 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP Y+PTSP+YSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 1780 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1839 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1840 SPKYTPTSPSYSPSS-PEYTP 1859 Score = 111 bits (277), Expect = 5e-23 Identities = 54/100 (54%), Positives = 74/100 (74%), Gaps = 12/100 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP+YSPT+P YSPTSP+YSP+SPTY+P+SP S TSP YSP+SP++SP Sbjct: 1870 KYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSP 1929 Query: 404 S-----------TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + Y+P + + D Sbjct: 1930 TSPTYSPTSPKGSTYSPTSPGYSPTSPT-YSPAISPDDSD 1968 Score = 110 bits (274), Expect = 1e-22 Identities = 53/79 (67%), Positives = 61/79 (77%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 SP Y+P SP YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP S Sbjct: 1607 SPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1666 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1667 SYSPTSPSYSPTSPS-YSP 1684 Score = 110 bits (274), Expect = 1e-22 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1863 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSP 1922 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1923 TSPKYSPTSPTYSPTSPKGSTYSP 1946 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1822 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1881 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1882 SPTYSPTTPKYSPTSPT-YSP 1901 Score = 108 bits (270), Expect = 3e-22 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 1814 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1873 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1874 TSPKYSPTSPTYSP-TTPKYSP 1894 Score = 108 bits (270), Expect = 3e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1850 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPT 1909 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1910 SPKYSPTSPTYSPTS-PKYSP 1929 Score = 104 bits (260), Expect = 4e-21 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 1801 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1860 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1861 SPKYSPTSPKYSPTS-PKYSP 1880 Score = 103 bits (257), Expect = 1e-20 Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTSPSYSPTSPSYSPTSPSYS P+SP Y+P+SP S TSP YSP+ Sbjct: 1717 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPT 1776 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S Y+P+ P YSP+S S Y+P Sbjct: 1777 SPSYSPTSPNYTPTSPNYSPTSPS-YSP 1803 Score = 103 bits (256), Expect = 1e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1842 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1901 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1902 TSPTYTPTSPKYSPTSPT-YSP 1922 Score = 102 bits (253), Expect = 3e-20 Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPS--YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP Y P SP Y+P SP YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +S Sbjct: 1596 YSPTSPAYEPRSPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYS 1655 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S S Y+P Sbjct: 1656 PTSPSYSPTSPSYSPTSPS-YSP 1677 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS PSYSPTSP+Y+PTSP+YSP+SP+YSP+SP S +SP Y+P Sbjct: 1759 YTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQ 1818 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 1819 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1845 Score = 93.6 bits (231), Expect = 1e-17 Identities = 50/88 (56%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+ Sbjct: 1787 YTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1846 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ Y+P+ P YSP+S +Y+P Sbjct: 1847 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1873 Score = 83.2 bits (204), Expect = 1e-14 Identities = 46/90 (51%), Positives = 56/90 (62%), Gaps = 13/90 (14%) Frame = -2 Query: 572 PSSPYSPT-----------SPSYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDY 432 P+SPY P+ SP+YSPTSP+Y P SP Y+P SP YSP+SP S TSP Y Sbjct: 1574 PASPYIPSPGYITLHFGALSPNYSPTSPAYEPRSPGGGYTPQSPGYSPTSPSYSPTSPSY 1633 Query: 431 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342 SP+SP YSP+ P YSP+S S Y+P Sbjct: 1634 SPTSPN------YSPTSPSYSPTSPS-YSP 1656 [53][TOP] >UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus RepID=UPI0001B7A25C Length = 1968 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1680 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1739 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1740 SPSYSPTSPNYSPTSPN-YTP 1759 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1631 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1690 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1691 SPSYSPTSPSYSPTSPS-YSP 1710 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1697 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1698 SPSYSPTSPSYSPTSPS-YSP 1717 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1659 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1718 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1719 SPSYSPTSPSYSPTSPS-YSP 1738 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1666 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1725 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1726 SPSYSPTSPSYSPTSPS-YSP 1745 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1760 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1761 SPSYSPTSPSYSPTSPN-YTP 1780 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1673 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1732 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1733 SPSYSPTSPSYSPTSPN-YSP 1752 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1694 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1753 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1754 SPNYTPTSPSYSPTSPS-YSP 1773 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1610 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1669 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1670 SPSYSPTSPSYSPTSPS-YSP 1689 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P Sbjct: 1722 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1781 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1782 SPNYSPTSPSYSPTSPS-YSP 1801 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 1778 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1837 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1838 SPKYTPTSPSYSPSS-PEYTP 1857 Score = 113 bits (282), Expect = 1e-23 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP Sbjct: 1743 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1802 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P Y+P S + YTP + Sbjct: 1803 SPSYSPSSPRYTPQSPT-YTPSS 1824 Score = 112 bits (279), Expect = 3e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1750 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1809 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 1810 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1836 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1861 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1920 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1921 TSPKYSPTSPTYSPTSPKGSTYSP 1944 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1820 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1879 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1880 SPTYSPTTPKYSPTSPT-YSP 1899 Score = 108 bits (270), Expect = 3e-22 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 1812 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1871 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1872 TSPKYSPTSPTYSP-TTPKYSP 1892 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1848 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1907 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1908 SPKYSPTSPTYSPTS-PKYSP 1927 Score = 107 bits (266), Expect = 9e-22 Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 5/79 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1875 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1934 Query: 404 S----TGYSPSQPGYSPSS 360 + + YSP+ PGYSP+S Sbjct: 1935 TSPKGSTYSPTSPGYSPTS 1953 Score = 104 bits (260), Expect = 4e-21 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 1799 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1858 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1859 SPKYSPTSPKYSPTS-PKYSP 1878 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1840 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1899 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1900 TSPVYTPTSPKYSPTSPT-YSP 1920 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1579 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1638 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1639 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1675 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P Sbjct: 1757 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1816 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 1817 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1843 Score = 94.7 bits (234), Expect = 5e-18 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+ Sbjct: 1785 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1844 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ Y+P+ P YSP+S +Y+P Sbjct: 1845 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1871 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1548 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1600 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1601 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1626 [54][TOP] >UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus RepID=UPI0001B7A25B Length = 1932 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1700 SPSYSPTSPNYSPTSPN-YTP 1719 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1591 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1651 SPSYSPTSPSYSPTSPS-YSP 1670 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1658 SPSYSPTSPSYSPTSPS-YSP 1677 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1679 SPSYSPTSPSYSPTSPS-YSP 1698 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1685 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1686 SPSYSPTSPSYSPTSPS-YSP 1705 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1720 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1721 SPSYSPTSPSYSPTSPN-YTP 1740 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1692 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1693 SPSYSPTSPSYSPTSPN-YSP 1712 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1654 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1713 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1714 SPNYTPTSPSYSPTSPS-YSP 1733 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1570 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1741 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1742 SPNYSPTSPSYSPTSPS-YSP 1761 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 1738 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1797 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1798 SPKYTPTSPSYSPSS-PEYTP 1817 Score = 113 bits (282), Expect = 1e-23 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP Sbjct: 1703 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1762 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P Y+P S + YTP + Sbjct: 1763 SPSYSPSSPRYTPQSPT-YTPSS 1784 Score = 112 bits (279), Expect = 3e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1710 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1769 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 1770 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1796 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1821 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1880 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1881 TSPKYSPTSPTYSPTSPKGSTYSP 1904 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1780 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1839 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1840 SPTYSPTTPKYSPTSPT-YSP 1859 Score = 108 bits (270), Expect = 3e-22 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 1772 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1831 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1832 TSPKYSPTSPTYSP-TTPKYSP 1852 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1808 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1867 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1868 SPKYSPTSPTYSPTS-PKYSP 1887 Score = 107 bits (266), Expect = 9e-22 Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 5/79 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1835 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1894 Query: 404 S----TGYSPSQPGYSPSS 360 + + YSP+ PGYSP+S Sbjct: 1895 TSPKGSTYSPTSPGYSPTS 1913 Score = 104 bits (260), Expect = 4e-21 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 1759 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1818 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1819 SPKYSPTSPKYSPTS-PKYSP 1838 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1800 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1859 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1860 TSPVYTPTSPKYSPTSPT-YSP 1880 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1539 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1598 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1599 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1635 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P Sbjct: 1717 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1776 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 1777 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1803 Score = 94.7 bits (234), Expect = 5e-18 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+ Sbjct: 1745 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1804 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ Y+P+ P YSP+S +Y+P Sbjct: 1805 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1831 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1849 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1908 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1909 YSPTSPTYSLTSPAISPEDSDE 1930 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1508 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1560 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1561 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1586 [55][TOP] >UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) n=1 Tax=Rattus norvegicus RepID=UPI0000DA33D8 Length = 1970 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855 Score = 113 bits (282), Expect = 1e-23 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P Y+P S + YTP + Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822 Score = 112 bits (279), Expect = 3e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897 Score = 108 bits (270), Expect = 3e-22 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925 Score = 107 bits (266), Expect = 9e-22 Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 5/79 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932 Query: 404 S----TGYSPSQPGYSPSS 360 + + YSP+ PGYSP+S Sbjct: 1933 TSPKGSTYSPTSPGYSPTS 1951 Score = 104 bits (260), Expect = 4e-21 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841 Score = 94.7 bits (234), Expect = 5e-18 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+ Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ Y+P+ P YSP+S +Y+P Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1947 YSPTSPTYSLTSPAISPEDSDE 1968 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624 [56][TOP] >UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus RepID=O35559_CRIGR Length = 1970 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855 Score = 113 bits (282), Expect = 1e-23 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P Y+P S + YTP + Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822 Score = 112 bits (279), Expect = 3e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897 Score = 108 bits (270), Expect = 3e-22 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965 Score = 104 bits (260), Expect = 4e-21 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841 Score = 94.7 bits (234), Expect = 5e-18 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+ Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ Y+P+ P YSP+S +Y+P Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624 [57][TOP] >UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE Length = 1966 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855 Score = 113 bits (282), Expect = 1e-23 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P Y+P S + YTP + Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822 Score = 112 bits (279), Expect = 3e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPT 1877 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897 Score = 107 bits (267), Expect = 7e-22 Identities = 53/94 (56%), Positives = 71/94 (75%), Gaps = 7/94 (7%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932 Query: 404 S----TGYSPSQPGYSPSST--SQYTPKTNDNKD 321 + + YSP+ PGYSP+S S +P +D ++ Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISDEEN 1966 Score = 106 bits (265), Expect = 1e-21 Identities = 51/82 (62%), Positives = 67/82 (81%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSP 1869 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890 Score = 106 bits (264), Expect = 1e-21 Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+P SP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1846 YSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925 Score = 105 bits (262), Expect = 3e-21 Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSP YSPTSP YSPTSP+YSP++P YSP+SP S TSP Y+P+SP++SP Sbjct: 1853 YTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1913 SPTYSPTSPKYSPTSPT-YSP 1932 Score = 104 bits (260), Expect = 4e-21 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPA 1856 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876 Score = 100 bits (250), Expect = 6e-20 Identities = 48/82 (58%), Positives = 64/82 (78%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+P SP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1838 KYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841 Score = 94.7 bits (234), Expect = 5e-18 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+ Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ Y+P+ P YSP+S +Y+P Sbjct: 1843 SPSYSPSSPEYTPASPKYSPTS-PKYSP 1869 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624 [58][TOP] >UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis RepID=B7PJA3_IXOSC Length = 1937 Score = 117 bits (294), Expect = 5e-25 Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP+S S Y+P + Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSPSS 1723 Score = 117 bits (294), Expect = 5e-25 Identities = 58/83 (69%), Positives = 69/83 (83%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P+SP S TSP YSP+SP +SP Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPT 1750 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSPSS + Y+P++ Sbjct: 1751 SPSYSPTSPSYSPSSPN-YSPQS 1772 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSPS P Y+P+S S Y+P Sbjct: 1716 SPSYSPSSPNYTPASPS-YSP 1735 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1722 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 + Y+P+ P YSP+S S Y+P Sbjct: 1723 SPNYTPASPSYSPTSPS-YSP 1742 Score = 116 bits (291), Expect = 1e-24 Identities = 59/89 (66%), Positives = 69/89 (77%), Gaps = 8/89 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSPSSP S SP YSP SP +SPS Sbjct: 1726 YTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPS 1785 Query: 401 T-GYSPSQPGYSPSSTS------QYTPKT 336 + YSP+ P YSP+S S QYTP + Sbjct: 1786 SPKYSPTSPSYSPTSPSYSPGSPQYTPSS 1814 Score = 115 bits (289), Expect = 2e-24 Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP YSP+SP +SP Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPT 1743 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP+S S Y+P + Sbjct: 1744 SPSYSPTSPSYSPTSPS-YSPSS 1765 Score = 114 bits (285), Expect = 5e-24 Identities = 56/82 (68%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSPSYSP+SP YSPTSP YSP+SPTY+PSSP S TSP YSP+SPQ+SP Sbjct: 1816 KYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSP 1875 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1876 TSPKYSPTSPKYSPTSPT-YSP 1896 Score = 114 bits (284), Expect = 7e-24 Identities = 56/80 (70%), Positives = 67/80 (83%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +P+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1608 TPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1668 PSYSPTSPSYSPTSPS-YSP 1686 Score = 112 bits (280), Expect = 2e-23 Identities = 56/83 (67%), Positives = 66/83 (79%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP SP YSP+SP YSPTSPSYSPTSPSYSP SP Y+PSSP S TSP YSP+SP +SPS Sbjct: 1775 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPS 1834 Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336 + YSP+ P YSP+S + YTP + Sbjct: 1835 SPKYSPTSPKYSPTSPT-YTPSS 1856 Score = 112 bits (279), Expect = 3e-23 Identities = 54/83 (65%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SP+Y+P SPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1705 YSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1764 Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336 + YSP P YSP S S Y+P + Sbjct: 1765 SPNYSPQSPSYSPGSPS-YSPSS 1786 Score = 112 bits (279), Expect = 3e-23 Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 5/84 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 ++PSSP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP+ Sbjct: 1852 YTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1911 Query: 401 ----TGYSPSQPGYSPSSTSQYTP 342 + YSP+ PGYSPSS + Y+P Sbjct: 1912 SPKGSSYSPTSPGYSPSSPT-YSP 1934 Score = 109 bits (273), Expect = 1e-22 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP +P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1600 YAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1659 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1660 SPSYSPTSPSYSPTSPS-YSP 1679 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP SP Y+P+SP YSPTSP+YSPTSPSYSPSSP YSP+SP S TSP Y+PSSP++SP Sbjct: 1803 YSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPT 1862 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1863 SPQYSPTSPQYSPTS-PKYSP 1882 Score = 108 bits (270), Expect = 3e-22 Identities = 53/81 (65%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+P+SPS +P SP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1593 YSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPT 1652 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672 Score = 107 bits (268), Expect = 5e-22 Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP+Y+P+SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1837 KYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSP 1896 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1897 TSPKYSPTSPTYSPTSPKGSSYSP 1920 Score = 107 bits (267), Expect = 7e-22 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSP SPSYSP SPSYSP+SP YSP+SP+YSP+SP S SP Y+PSSP++SP Sbjct: 1761 YSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPT 1820 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPSS +Y+P Sbjct: 1821 SPTYSPTSPSYSPSS-PKYSP 1840 Score = 107 bits (266), Expect = 9e-22 Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP SP YSP SPSYSP+SP YSPTSPSYSP+SP+YSP SP + +SP YSP+SP +SP Sbjct: 1768 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPT 1827 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSPS P YSP+S +Y+P Sbjct: 1828 SPSYSPSSPKYSPTS-PKYSP 1847 Score = 102 bits (255), Expect = 2e-20 Identities = 50/80 (62%), Positives = 65/80 (81%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SP SP YSP+SP+Y+P+SPS +P SP+YSP+SP+YSP+SP S TSP+YSP+SP +SP S Sbjct: 1587 SPVSPNYSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTS 1646 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1647 PSYSPTSPSYSPTSPS-YSP 1665 Score = 100 bits (250), Expect = 6e-20 Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423 +SPSSP YSPTSPSYSPTSPSYSP SP Y+ P+SPTYSP+SP S +SP YSP+ Sbjct: 1782 YSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPT 1841 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP++SP S Y+PS P YSP+S QY+P Sbjct: 1842 SPKYSPTSPTYTPSSPKYSPTS-PQYSP 1868 Score = 99.4 bits (246), Expect = 2e-19 Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTSPSYSP +SP+YSP SPSYSP SP+YSPSSP S TSP YSP+ Sbjct: 1740 YSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPT 1799 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S Y+PS P YSP+S + Y+P Sbjct: 1800 SPSYSPGSPQYTPSSPKYSPTSPT-YSP 1826 Score = 99.4 bits (246), Expect = 2e-19 Identities = 51/78 (65%), Positives = 59/78 (75%), Gaps = 4/78 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1865 QYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSP- 1923 Query: 413 FSPSTGYSPSQPGYSPSS 360 GYSPS P YSP+S Sbjct: 1924 -----GYSPSSPTYSPTS 1936 Score = 95.9 bits (237), Expect = 2e-18 Identities = 49/80 (61%), Positives = 59/80 (73%), Gaps = 12/80 (15%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ--- 414 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SPTYSP+SP S TSP YSP+SP+ Sbjct: 1858 KYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSS 1917 Query: 413 -------FSPSTG-YSPSQP 378 +SPS+ YSP+ P Sbjct: 1918 YSPTSPGYSPSSPTYSPTSP 1937 Score = 64.7 bits (156), Expect = 5e-09 Identities = 44/86 (51%), Positives = 52/86 (60%), Gaps = 7/86 (8%) Frame = -2 Query: 578 FSPS-----SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTY-SPSSPYNSGTSPDYSPSSP 417 FSPS S YSP S SP S P SP+ SP+SP SP SP S +SP Y+PSSP Sbjct: 1547 FSPSAASDASGYSPASAGLSP-GWSPQPGSPASSPASPYIPSPVSPNYSPSSPAYAPSSP 1605 Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342 +P S YSP+ P YSP+S S Y+P Sbjct: 1606 SMTPASPTYSPTSPSYSPTSPS-YSP 1630 [59][TOP] >UniRef100_B4DET1 cDNA FLJ53860, highly similar to DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6) n=1 Tax=Homo sapiens RepID=B4DET1_HUMAN Length = 855 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 636 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 637 SPSYSPTSPNYSPTSPN-YTP 656 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 528 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 587 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 588 SPSYSPTSPSYSPTSPS-YSP 607 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 535 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 594 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 595 SPSYSPTSPSYSPTSPS-YSP 614 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 615 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 616 SPSYSPTSPSYSPTSPS-YSP 635 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 622 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 623 SPSYSPTSPSYSPTSPS-YSP 642 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 657 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 658 SPSYSPTSPSYSPTSPN-YTP 677 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 629 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 630 SPSYSPTSPSYSPTSPN-YSP 649 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 650 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 651 SPNYTPTSPSYSPTSPS-YSP 670 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 507 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 566 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 567 SPSYSPTSPSYSPTSPS-YSP 586 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P Sbjct: 619 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 678 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 679 SPNYSPTSPSYSPTSPS-YSP 698 Score = 113 bits (282), Expect = 1e-23 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP Sbjct: 640 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 699 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P Y+P S + YTP + Sbjct: 700 SPSYSPSSPRYTPQSPT-YTPSS 721 Score = 112 bits (279), Expect = 3e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 647 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 706 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 707 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 733 Score = 109 bits (273), Expect = 1e-22 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 675 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 734 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S +Y+P Sbjct: 735 SPKYTPTSPKYSPTS-PKYSP 754 Score = 108 bits (271), Expect = 2e-22 Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+ P +SP Sbjct: 744 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSP 803 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 804 TSPKYSPTSPTYSPTSPKGSTYSP 827 Score = 108 bits (269), Expect = 4e-22 Identities = 53/82 (64%), Positives = 66/82 (80%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 709 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 768 Query: 404 ST-GYSPSQPGYSPSSTSQYTP 342 +T YSP+ P YSP+S YTP Sbjct: 769 TTPKYSPTSPTYSPTS-PVYTP 789 Score = 106 bits (264), Expect = 1e-21 Identities = 52/81 (64%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 731 YSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 790 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 791 SPKYSPTGPTYSPTS-PKYSP 810 Score = 105 bits (263), Expect = 2e-21 Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+ P S TSP YSP+SP +SP Sbjct: 758 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSP 817 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 818 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 850 Score = 104 bits (259), Expect = 6e-21 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSP+SP++SP Sbjct: 696 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPT 755 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 756 SPKYSPTSPTYSP-TTPKYSP 775 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 476 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 535 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 536 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 572 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P Sbjct: 654 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 713 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 714 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 740 Score = 92.4 bits (228), Expect = 2e-17 Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPT P+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 772 KYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 831 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 832 YSPTSPTYSLTSPAISPDDSDE 853 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 445 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 497 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 498 AYEPRSPGGYTPQSPSYSPTSPS-YSP 523 [60][TOP] >UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN Length = 1970 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPA 1835 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855 Score = 113 bits (282), Expect = 1e-23 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P Y+P S + YTP + Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822 Score = 112 bits (279), Expect = 3e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925 Score = 107 bits (267), Expect = 7e-22 Identities = 53/81 (65%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSP SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1818 YTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965 Score = 106 bits (265), Expect = 1e-21 Identities = 51/82 (62%), Positives = 67/82 (81%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSP SP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890 Score = 104 bits (260), Expect = 4e-21 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPT 1856 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPAS-PKYTP 1841 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968 Score = 92.8 bits (229), Expect = 2e-17 Identities = 50/88 (56%), Positives = 66/88 (75%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P+ Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPT 1842 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ Y+P+ P YSP+S +Y+P Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624 [61][TOP] >UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DXL0_ZYGRC Length = 1744 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP +SP Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPT 1681 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1682 SPSYSPTSPSYSPTSPS-YSP 1701 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1640 SPSYSPTSPSYSPTSPS-YSP 1659 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1647 SPSYSPTSPSYSPTSPS-YSP 1666 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1661 SPSYSPTSPNYSPTSPS-YSP 1680 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 116 bits (291), Expect = 1e-24 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1559 YSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1619 SPSYSPTSPSYSPTSPS-YSP 1638 Score = 116 bits (290), Expect = 1e-24 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSPSSP YSPTSPSYSPTSPSYSP SP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1538 FSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1598 SPSYSPTSPSYSPTSPS-YSP 1617 Score = 115 bits (289), Expect = 2e-24 Identities = 59/98 (60%), Positives = 72/98 (73%), Gaps = 11/98 (11%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702 Query: 404 STGYSPSQPGYSPSST---------SQYTPKTNDNKDD 318 S YSP+ P YSP+S S +PK +D + D Sbjct: 1703 SPSYSPTSPSYSPTSPNYSPGSPTYSPSSPKQDDREKD 1740 Score = 107 bits (268), Expect = 5e-22 Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 2/78 (2%) Frame = -2 Query: 569 SSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396 SSP +SP+SP+YSPTSPSYSPTSPSYSP SP YSP+SP S TSP YSP+SP +SP S Sbjct: 1534 SSPGFSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1593 Query: 395 YSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1594 YSPTSPSYSPTSPS-YSP 1610 [62][TOP] >UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus RepID=RPB1_MOUSE Length = 1970 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855 Score = 113 bits (282), Expect = 1e-23 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P Y+P S + YTP + Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822 Score = 112 bits (279), Expect = 3e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPT 1877 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965 Score = 106 bits (265), Expect = 1e-21 Identities = 51/82 (62%), Positives = 67/82 (81%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + SP YSP+SP++SP Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSP 1869 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890 Score = 106 bits (264), Expect = 1e-21 Identities = 52/81 (64%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+P SP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1846 YSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925 Score = 105 bits (262), Expect = 3e-21 Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSP YSPTSP YSPTSP+YSP++P YSP+SP S TSP Y+P+SP++SP Sbjct: 1853 YTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1913 SPTYSPTSPKYSPTSPT-YSP 1932 Score = 104 bits (260), Expect = 4e-21 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPA 1856 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876 Score = 100 bits (250), Expect = 6e-20 Identities = 48/82 (58%), Positives = 64/82 (78%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+P SP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1838 KYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841 Score = 94.7 bits (234), Expect = 5e-18 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+ Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ Y+P+ P YSP+S +Y+P Sbjct: 1843 SPSYSPSSPEYTPASPKYSPTS-PKYSP 1869 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624 [63][TOP] >UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Euarchontoglires RepID=RPB1_HUMAN Length = 1970 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1738 SPSYSPTSPNYSPTSPN-YTP 1757 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1731 SPSYSPTSPSYSPTSPN-YSP 1750 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1752 SPNYTPTSPSYSPTSPS-YSP 1771 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1780 SPNYSPTSPSYSPTSPS-YSP 1799 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1836 SPKYTPTSPSYSPSS-PEYTP 1855 Score = 113 bits (282), Expect = 1e-23 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P Y+P S + YTP + Sbjct: 1801 SPSYSPSSPRYTPQSPT-YTPSS 1822 Score = 112 bits (279), Expect = 3e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1748 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1807 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 1808 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1834 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1859 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1918 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1919 TSPKYSPTSPTYSPTSPKGSTYSP 1942 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1878 SPTYSPTTPKYSPTSPT-YSP 1897 Score = 108 bits (270), Expect = 3e-22 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 1810 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1869 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1870 TSPKYSPTSPTYSP-TTPKYSP 1890 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1846 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1905 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1906 SPKYSPTSPTYSPTS-PKYSP 1925 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1933 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1965 Score = 104 bits (260), Expect = 4e-21 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 1797 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1856 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1857 SPKYSPTSPKYSPTS-PKYSP 1876 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1838 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1897 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1898 TSPVYTPTSPKYSPTSPT-YSP 1918 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1814 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 1815 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1841 Score = 94.7 bits (234), Expect = 5e-18 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+ Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ Y+P+ P YSP+S +Y+P Sbjct: 1843 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 1869 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1887 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1946 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1947 YSPTSPTYSLTSPAISPDDSDE 1968 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624 [64][TOP] >UniRef100_P11414 DNA-directed RNA polymerase II subunit RPB1 (Fragment) n=1 Tax=Cricetulus griseus RepID=RPB1_CRIGR Length = 467 Score = 117 bits (294), Expect = 5e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 175 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 234 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 235 SPSYSPTSPNYSPTSPN-YTP 254 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 126 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 185 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 186 SPSYSPTSPSYSPTSPS-YSP 205 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 133 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 192 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 193 SPSYSPTSPSYSPTSPS-YSP 212 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 154 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 213 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 214 SPSYSPTSPSYSPTSPS-YSP 233 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 161 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 220 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 221 SPSYSPTSPSYSPTSPS-YSP 240 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 196 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 255 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 256 SPSYSPTSPSYSPTSPN-YTP 275 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 168 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 227 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 228 SPSYSPTSPSYSPTSPN-YSP 247 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 189 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 248 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 249 SPNYTPTSPSYSPTSPS-YSP 268 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 105 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 164 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 165 SPSYSPTSPSYSPTSPS-YSP 184 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP Y+P+SP S TSP YSP+SP ++P Sbjct: 217 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 276 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 277 SPNYSPTSPSYSPTSPS-YSP 296 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 273 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 332 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 333 SPKYTPTSPSYSPSS-PEYTP 352 Score = 113 bits (282), Expect = 1e-23 Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+Y+PTSPSYSPTSPSYSP+SP Y+P+SP S TSP YSP+SP +SP Sbjct: 238 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 297 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P Y+P S + YTP + Sbjct: 298 SPSYSPSSPRYTPQSPT-YTPSS 319 Score = 112 bits (279), Expect = 3e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 245 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 304 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 305 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 331 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 356 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 415 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 416 TSPKYSPTSPTYSPTSPKGSTYSP 439 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 315 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 374 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 375 SPTYSPTTPKYSPTSPT-YSP 394 Score = 108 bits (270), Expect = 3e-22 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 307 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 366 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 367 TSPKYSPTSPTYSP-TTPKYSP 387 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 343 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 402 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 403 SPKYSPTSPTYSPTS-PKYSP 422 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 370 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 429 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 430 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 462 Score = 104 bits (260), Expect = 4e-21 Identities = 50/81 (61%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 294 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 353 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 354 SPKYSPTSPKYSPTS-PKYSP 373 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 335 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 394 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 395 TSPVYTPTSPKYSPTSPT-YSP 415 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 74 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 133 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 134 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 170 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P Sbjct: 252 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 311 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 312 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 338 Score = 94.7 bits (234), Expect = 5e-18 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+ Sbjct: 280 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 339 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ Y+P+ P YSP+S +Y+P Sbjct: 340 SPSYSPSSPEYTPTSPKYSPTS-PKYSP 366 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 384 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 443 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 444 YSPTSPTYSLTSPAISPDDSDE 465 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 43 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 95 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 96 AYEPRSPGGYTPQSPSYSPTSPS-YSP 121 [65][TOP] >UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis RepID=UPI000186D846 Length = 1885 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1601 YSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1661 SPSYSPTSPSYSPTSPS-YSP 1680 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694 Score = 116 bits (291), Expect = 1e-24 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1594 YSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673 Score = 116 bits (291), Expect = 1e-24 Identities = 55/80 (68%), Positives = 68/80 (85%), Gaps = 2/80 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPS 1716 Query: 401 T-GYSPSQPGYSPSSTSQYT 345 + Y+P+ P +SP+S S Y+ Sbjct: 1717 SPNYTPASPSFSPTSPSLYS 1736 Score = 116 bits (290), Expect = 1e-24 Identities = 56/77 (72%), Positives = 65/77 (84%), Gaps = 2/77 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681 Query: 404 STGYSPSQPGYSPSSTS 354 S YSP+ P YSP+S S Sbjct: 1682 SPSYSPTSPSYSPTSPS 1698 Score = 115 bits (289), Expect = 2e-24 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-P 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +S Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRT 1702 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPSS + YTP Sbjct: 1703 SPSYSPTSPSYSPSSPN-YTP 1722 Score = 114 bits (285), Expect = 5e-24 Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YS + P YSP+S S Y+P + Sbjct: 1696 SPSYSRTSPSYSPTSPS-YSPSS 1717 Score = 110 bits (274), Expect = 1e-22 Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 F+P+SP YSPTSPSYSP+SP+YSP SPSYSP+SP+YSP+SP S TSP YSP+ Sbjct: 1573 FAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1633 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1659 Score = 108 bits (269), Expect = 4e-22 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP ++PTSPS +PTS +YSPTSPSYSPSSP YSP+SP S TSP YSP+SP +SP Sbjct: 1566 YSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPT 1625 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645 Score = 108 bits (269), Expect = 4e-22 Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYS +SP+YSP+SP S +SP+Y+P+SP FSP Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPT 1730 Query: 404 ------STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP S +Y+P Sbjct: 1731 SPSLYSSPRYSPASPSYSPGS-PKYSP 1756 Score = 107 bits (267), Expect = 7e-22 Identities = 59/93 (63%), Positives = 67/93 (72%), Gaps = 14/93 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD------YSPSS 420 +SP+SP YSPTSPSYS TSPSYSPTSPSYSPSSP Y+P+SP S TSP YSP+S Sbjct: 1685 YSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPAS 1744 Query: 419 PQFSP-STGYSPSQPGYSPSSTS------QYTP 342 P +SP S YSP+ P YSP+S S QYTP Sbjct: 1745 PSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTP 1777 Score = 107 bits (266), Expect = 9e-22 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 9/91 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP SP YSPTSPSYSPTSPSY+ SP Y+P+SP YSP+SP S TSP YSPSSP +P Sbjct: 1747 YSPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPG 1806 Query: 404 -STGYSPSQPGYSPSSTS------QYTPKTN 333 ST YSP+ P YSP+S S QY+P ++ Sbjct: 1807 ASTRYSPTSPKYSPTSLSYSPASPQYSPSSS 1837 Score = 102 bits (254), Expect = 2e-20 Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 FSP+SP +SP YSP SPSYSP SP YSP+SP+YSP+SP + SP Y+P+SPQ+SP S Sbjct: 1727 FSPTSPSLYSSPRYSPASPSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTS 1786 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSPSS S +TP Sbjct: 1787 PTYSPTSPSYSPSSPS-HTP 1805 Score = 99.0 bits (245), Expect = 2e-19 Identities = 54/99 (54%), Positives = 67/99 (67%), Gaps = 8/99 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 +SPSSP Y+P SPS+SPTSPS YSP SPSYSP SP YSP+SP S TSP Y+ S Sbjct: 1713 YSPSSPNYTPASPSFSPTSPSLYSSPRYSPASPSYSPGSPKYSPTSPSYSPTSPSYASVS 1772 Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306 PQ++P S YSP+ P YSP+S S Y+P + + T+ Sbjct: 1773 PQYTPTSPQYSPTSPTYSPTSPS-YSPSSPSHTPGASTR 1810 Score = 98.2 bits (243), Expect = 4e-19 Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YSP+SP+++PTSPS +PTS +YSP+SP+YSPSSP S SP YSP+SP +SP S Y Sbjct: 1563 SPSYSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSY 1622 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1623 SPTSPSYSPTSPS-YSP 1638 Score = 98.2 bits (243), Expect = 4e-19 Identities = 51/84 (60%), Positives = 58/84 (69%), Gaps = 11/84 (13%) Frame = -2 Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 +SPSSP YSPTSP YSPTS SYSP SP YSPSS YSP+SP + TSPDYS Sbjct: 1796 YSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSA 1855 Query: 425 SSPQFSPS--TGYSPSQPGYSPSS 360 SSP +SP+ YSP+ P YSP+S Sbjct: 1856 SSPTYSPTGPPSYSPTSPTYSPTS 1879 Score = 96.7 bits (239), Expect = 1e-18 Identities = 56/101 (55%), Positives = 69/101 (68%), Gaps = 17/101 (16%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYS-------PTSPSYSPTSPSYSPSSPTYSPSSPYN--------S 450 ++SP+SP YSPTSPSY+ PTSP YSPTSP+YSP+SP+YSPSSP + S Sbjct: 1753 KYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYS 1812 Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTND 330 TSP YSP+S +SP S YSPS YSP+S + YTP + D Sbjct: 1813 PTSPKYSPTSLSYSPASPQYSPSSSKYSPTSPT-YTPTSPD 1852 Score = 96.7 bits (239), Expect = 1e-18 Identities = 54/110 (49%), Positives = 65/110 (59%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPT--------YSPSSPYNSG 447 +SP+SP Y+PTSP YSPTSP+YSPTSPSYSPSSP+ YSP+SP S Sbjct: 1761 YSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSP 1820 Query: 446 TSPDYSPSSPQFSPSTG---------------YSPSQPGYSPSSTSQYTP 342 TS YSP+SPQ+SPS+ YS S P YSP+ Y+P Sbjct: 1821 TSLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSP 1870 Score = 80.1 bits (196), Expect = 1e-13 Identities = 38/58 (65%), Positives = 48/58 (82%), Gaps = 2/58 (3%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGTSPDYSPSSPQF 411 +SP+SP YSP+S YSPTSP+Y+PTSP YS SSPTYSP+ P + S TSP YSP+SP++ Sbjct: 1825 YSPASPQYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPTYSPTSPEY 1882 Score = 68.9 bits (167), Expect = 3e-10 Identities = 33/52 (63%), Positives = 43/52 (82%), Gaps = 2/52 (3%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-TYSPSSPYNSGTSPDY 432 ++SPSS YSPTSP+Y+PTSP YS +SP+YSP+ P +YSP+SP S TSP+Y Sbjct: 1831 QYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPTYSPTSPEY 1882 Score = 65.9 bits (159), Expect = 2e-09 Identities = 45/92 (48%), Positives = 53/92 (57%), Gaps = 11/92 (11%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSY-SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 FSPS S S SP YSP SP SP+SP PS+ Y PS G SP YSPSSP F+ Sbjct: 1519 FSPSGSSDASGLSPGYSPWSPQPGSPSSPG--PSNSPYVPSP--GGGMSPSYSPSSPAFA 1574 Query: 407 P--------STGYSPSQPGYSPSSTSQYTPKT 336 P S+ YSP+ P YSPSS + Y+P + Sbjct: 1575 PTSPSMTPTSSNYSPTSPSYSPSSPN-YSPNS 1605 [66][TOP] >UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma floridae RepID=UPI000186501C Length = 1956 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 70/81 (86%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP++SP Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1759 SPSYSPTSPSYSPASPS-YSP 1778 Score = 116 bits (290), Expect = 1e-24 Identities = 57/83 (68%), Positives = 69/83 (83%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP + TSP YSP+SP +SP Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPT 1765 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP+S S Y+P + Sbjct: 1766 SPSYSPASPSYSPTSPS-YSPSS 1787 Score = 115 bits (288), Expect = 2e-24 Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPT 1779 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSPS P YSP S S Y+P + Sbjct: 1780 SPSYSPSSPNYSPQSPS-YSPSS 1801 Score = 115 bits (287), Expect = 3e-24 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y+P+S +Y+P Sbjct: 1738 SPSYSPTSPNYTPTS-PKYSP 1757 Score = 114 bits (285), Expect = 5e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSP SP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1615 YSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694 Score = 114 bits (285), Expect = 5e-24 Identities = 59/89 (66%), Positives = 68/89 (76%), Gaps = 9/89 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTSPSYSPTSP+ YSPTSPSYSP+SP+YSP+SP S TSP YSPS Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPS 1786 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPK 339 SP +SP S YSPS P YSPSS + +PK Sbjct: 1787 SPNYSPQSPSYSPSSPSYSPSSPNPSSPK 1815 Score = 111 bits (278), Expect = 4e-23 Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +P SP YSPTSPSYSPTSPSYSP SP+YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1609 TPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687 Score = 110 bits (276), Expect = 6e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 7/88 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 ++P+SP YSPTSPSYSPTSPSYSP SPSYSP+SP+YSPSSP S SP YSPSSP +SPS Sbjct: 1748 YTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPSSPSYSPS 1807 Query: 401 T------GYSPSQPGYSPSSTSQYTPKT 336 + Y+P+ P YSPSS +Y+P + Sbjct: 1808 SPNPSSPKYTPTSPKYSPSS-PKYSPSS 1834 Score = 105 bits (262), Expect = 3e-21 Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 7/86 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPS-----YSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SPSSP YSP SPSYSP+SPSYSP+SP+ Y+P+SP YSPSSP S +SP YSP+SP Sbjct: 1783 YSPSSPNYSPQSPSYSPSSPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSP 1842 Query: 416 QFSPSTG-YSPSQPGYSPSSTSQYTP 342 +SPS+ YSP+ P YSP ST +YTP Sbjct: 1843 TYSPSSAKYSPASPSYSP-STPKYTP 1867 Score = 103 bits (258), Expect = 7e-21 Identities = 51/85 (60%), Positives = 65/85 (76%), Gaps = 4/85 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSS YSP SPSYSP++P Y+PTSP YSP+SPTY+P+SP S TSP Y+P +P++SP Sbjct: 1844 YSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPT 1903 Query: 404 STGYSPSQPGYSPSST--SQYTPKT 336 S YSP+ P YSP+S S Y+P T Sbjct: 1904 SPKYSPTSPTYSPTSPKGSTYSPTT 1928 Score = 103 bits (256), Expect = 1e-20 Identities = 49/87 (56%), Positives = 69/87 (79%), Gaps = 1/87 (1%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP SP+Y+PTSP YSPTSPSY+P +P YSP+SP S TSP YSP+SP+ S Sbjct: 1864 KYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGST 1923 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNK 324 YSP+ PGYSP+S + Y+P++ +++ Sbjct: 1924 ---YSPTTPGYSPASPT-YSPESPESR 1946 Score = 102 bits (254), Expect = 2e-20 Identities = 53/95 (55%), Positives = 65/95 (68%), Gaps = 14/95 (14%) Frame = -2 Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SPSSP Y+PTSP YSP+SP YSP+SP YSP+SPTYSPSS S SP YSPS+P Sbjct: 1804 YSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTP 1863 Query: 416 QFSP--------STGYSPSQPGYSPSSTSQYTPKT 336 +++P S Y+P+ P YSP+S S YTP T Sbjct: 1864 KYTPTSPKYSPASPTYTPTSPKYSPTSPS-YTPDT 1897 Score = 96.3 bits (238), Expect = 2e-18 Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 453 P+SPY P+ SPSYSP SP+ YSPTSPSYSP+SP+YSP+SP Sbjct: 1577 PASPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNY 1636 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 95.5 bits (236), Expect = 3e-18 Identities = 51/86 (59%), Positives = 63/86 (73%), Gaps = 7/86 (8%) Frame = -2 Query: 578 FSPSSPY---S---PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SPSSP S P+SP Y+PTSP YSP+SP YSPSSP YSP+SP S +S YSP+SP Sbjct: 1797 YSPSSPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASP 1856 Query: 416 QFSPST-GYSPSQPGYSPSSTSQYTP 342 +SPST Y+P+ P YSP+S + YTP Sbjct: 1857 SYSPSTPKYTPTSPKYSPASPT-YTP 1881 Score = 89.4 bits (220), Expect = 2e-16 Identities = 47/89 (52%), Positives = 65/89 (73%), Gaps = 9/89 (10%) Frame = -2 Query: 581 RFSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 +++P+SP YSP+S P YSPTSP+YSP+S YSP+SP+YSPS+P + TSP YSP Sbjct: 1815 KYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSP 1874 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP ++P S YSP+ P Y+P T +Y+P Sbjct: 1875 ASPTYTPTSPKYSPTSPSYTP-DTPKYSP 1902 Score = 70.9 bits (172), Expect = 7e-11 Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 4/58 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSP---SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 ++SP+SP YSPTSP+YSPTSP +YSPT+P YSP+SPTYSP SP + T + S Sbjct: 1899 KYSPTSPKYSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSPESPESRATQEEEEDES 1956 Score = 58.2 bits (139), Expect = 5e-07 Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 13/92 (14%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQF 411 FSPS+ + S + SP++SPT S P SP P+SPY SP YSP+SP + Sbjct: 1545 FSPSAASDASGMSPAGYSPAWSPTPGS--PGSP--GPASPYIPSPGGPMSPSYSPASPAY 1600 Query: 410 SP---------STGYSPSQPGYSPSSTSQYTP 342 P S GYSP+ P YSP+S S Y+P Sbjct: 1601 MPRSPGGMTPQSPGYSPTSPSYSPTSPS-YSP 1631 [67][TOP] >UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1 (RNA polymerase II subunit B1) (DNA-directed RNA polymerase III largest subunit) n=1 Tax=Acyrthosiphon pisum RepID=UPI000179348F Length = 1862 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1709 SPSYSPTSPSYSPTSPS-YSP 1728 Score = 116 bits (290), Expect = 1e-24 Identities = 59/81 (72%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSPS P Y+ SS S YTP Sbjct: 1730 SPSYSPSSPQYAASSPS-YTP 1749 Score = 111 bits (277), Expect = 5e-23 Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 7/86 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYS-----PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SP+SP YSPTSPSYS PTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP Sbjct: 1630 YSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689 Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S YSP+ P YSP+S S Y+P Sbjct: 1690 SYSPTSPSYSPTSPSYSPTSPS-YSP 1714 Score = 106 bits (265), Expect = 1e-21 Identities = 59/117 (50%), Positives = 73/117 (62%), Gaps = 28/117 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSPQ++ S Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAAS 1743 Query: 401 TG---------------------------YSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 + YSP+ P YSPS+ S Y+P + + + G Sbjct: 1744 SPSYTPSATSGTSNYKYSPTSPSLAVSPTYSPTSPMYSPSNAS-YSPSSLQHTPNAG 1799 Score = 102 bits (254), Expect = 2e-20 Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 SP+ YSPTSPSYSPTSPSYS TS YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1625 SPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700 Score = 86.3 bits (212), Expect = 2e-15 Identities = 49/101 (48%), Positives = 60/101 (59%), Gaps = 21/101 (20%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSS-------------PTYSPSSPYNSGT- 444 ++SP+SP SP+YSPTSP YSP++ SYSPSS +YSPSSP S T Sbjct: 1759 KYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTN 1818 Query: 443 ----SPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTP 342 SP YSP+SP +SP G YSPS P YSP+S + P Sbjct: 1819 FSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSGP 1859 Score = 82.4 bits (202), Expect = 2e-14 Identities = 52/115 (45%), Positives = 64/115 (55%), Gaps = 35/115 (30%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSP---------------------------TSPSYSPSS 483 +SP+SP YSPTSPSYSPTSPSYSP TSPS + S Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTPSATSGTSNYKYSPTSPSLA-VS 1770 Query: 482 PTYSPSSPYNSGTSPDYSPSSPQFSPSTG-------YSPSQPGYSPSSTSQYTPK 339 PTYSP+SP S ++ YSPSS Q +P+ G YSPS P YSP++ S +P+ Sbjct: 1771 PTYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTNFSMASPR 1825 Score = 63.9 bits (154), Expect = 9e-09 Identities = 38/58 (65%), Positives = 42/58 (72%), Gaps = 8/58 (13%) Frame = -2 Query: 578 FSPSSP-YSPT-----SPSYSPTSPSYSP--TSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SPSSP YSPT SP YSPTSP+YSP SP YSPSSP+YSP+SP SG PD S Sbjct: 1807 YSPSSPVYSPTNFSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSG--PDES 1862 Score = 58.5 bits (140), Expect = 4e-07 Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 5/77 (6%) Frame = -2 Query: 569 SSPYSPT----SPSYS-PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +SPY P+ SP+Y+ P+SP + SPS +P++ YSP+SP S T + +P SP Sbjct: 1570 TSPYVPSPSSMSPNYNYPSSPQFGSLSPSMTPTN--YSPTSPQYSATQQN-TPKYSSMSP 1626 Query: 404 STGYSPSQPGYSPSSTS 354 + YSP+ P YSP+S S Sbjct: 1627 NYNYSPTSPSYSPTSPS 1643 [68][TOP] >UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1 (RNA polymerase II subunit B1) (DNA-directed RNA polymerase III largest subunit) n=1 Tax=Acyrthosiphon pisum RepID=UPI000179338A Length = 1862 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1709 SPSYSPTSPSYSPTSPS-YSP 1728 Score = 116 bits (290), Expect = 1e-24 Identities = 59/81 (72%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSPS P Y+ SS S YTP Sbjct: 1730 SPSYSPSSPQYTASSPS-YTP 1749 Score = 111 bits (277), Expect = 5e-23 Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 7/86 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYS-----PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SP+SP YSPTSPSYS PTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP Sbjct: 1630 YSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689 Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S YSP+ P YSP+S S Y+P Sbjct: 1690 SYSPTSPSYSPTSPSYSPTSPS-YSP 1714 Score = 104 bits (259), Expect = 6e-21 Identities = 56/110 (50%), Positives = 71/110 (64%), Gaps = 21/110 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP Y+ SSP ++PS Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSYTPS 1750 Query: 401 T--------------------GYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 YSP+ P YSPS+ S Y+P + + + G Sbjct: 1751 ATSGASNYKYSPTSPSLAVSPTYSPTSPMYSPSNAS-YSPSSVQHTPNAG 1799 Score = 102 bits (254), Expect = 2e-20 Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 SP+ YSPTSPSYSPTSPSYS TS YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1625 SPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1683 SYSPTSPSYSPTSPS-YSP 1700 Score = 86.7 bits (213), Expect = 1e-15 Identities = 49/102 (48%), Positives = 61/102 (59%), Gaps = 21/102 (20%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSS-------------PTYSPSSPYNSGT- 444 ++SP+SP SP+YSPTSP YSP++ SYSPSS +YSPSSP S T Sbjct: 1759 KYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSVQHTPNAGVTQYNQSYSPSSPVYSPTN 1818 Query: 443 ----SPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTPK 339 SP YSP+SP +SP G YSPS P YSP+S + P+ Sbjct: 1819 FSLASPRYSPTSPTYSPGVGSPNYSPSSPSYSPTSPNYSGPE 1860 Score = 82.0 bits (201), Expect = 3e-14 Identities = 52/115 (45%), Positives = 64/115 (55%), Gaps = 35/115 (30%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSP---------------------------TSPSYSPSS 483 +SP+SP YSPTSPSYSPTSPSYSP TSPS + S Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSYTPSATSGASNYKYSPTSPSLA-VS 1770 Query: 482 PTYSPSSPYNSGTSPDYSPSSPQFSPSTG-------YSPSQPGYSPSSTSQYTPK 339 PTYSP+SP S ++ YSPSS Q +P+ G YSPS P YSP++ S +P+ Sbjct: 1771 PTYSPTSPMYSPSNASYSPSSVQHTPNAGVTQYNQSYSPSSPVYSPTNFSLASPR 1825 Score = 64.7 bits (156), Expect = 5e-09 Identities = 35/56 (62%), Positives = 38/56 (67%), Gaps = 7/56 (12%) Frame = -2 Query: 560 YSPTSPSYSPT-----SPSYSPTSPSYSPS--SPTYSPSSPYNSGTSPDYSPSSPQ 414 YSP+SP YSPT SP YSPTSP+YSP SP YSPSSP S TSP+YS Q Sbjct: 1807 YSPSSPVYSPTNFSLASPRYSPTSPTYSPGVGSPNYSPSSPSYSPTSPNYSGPEEQ 1862 Score = 58.5 bits (140), Expect = 4e-07 Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 5/77 (6%) Frame = -2 Query: 569 SSPYSPT----SPSYS-PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +SPY P+ SP+Y+ P+SP + SPS +P++ YSP+SP S T + +P SP Sbjct: 1570 TSPYVPSPNSMSPNYNYPSSPQFGSMSPSMTPTN--YSPTSPQYSATQQN-TPKYSSMSP 1626 Query: 404 STGYSPSQPGYSPSSTS 354 + YSP+ P YSP+S S Sbjct: 1627 NYNYSPTSPSYSPTSPS 1643 [69][TOP] >UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151A8B3 Length = 1018 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 833 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 892 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 893 SPSYSPTSPSYSPTSPS-YSP 912 Score = 113 bits (283), Expect = 9e-24 Identities = 54/74 (72%), Positives = 63/74 (85%), Gaps = 2/74 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 840 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 899 Query: 404 STGYSPSQPGYSPS 363 S YSP+ P YSP+ Sbjct: 900 SPSYSPTSPSYSPT 913 Score = 112 bits (281), Expect = 2e-23 Identities = 55/77 (71%), Positives = 63/77 (81%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y Sbjct: 816 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 875 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 876 SPTSPSYSPTSPS-YSP 891 Score = 106 bits (264), Expect = 1e-21 Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S Y TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Y Sbjct: 809 SPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 868 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 869 SPTSPSYSPTSPS-YSP 884 Score = 102 bits (255), Expect = 2e-20 Identities = 49/71 (69%), Positives = 60/71 (84%), Gaps = 1/71 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+ Sbjct: 854 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 913 Query: 401 TGYSPSQPGYS 369 ++ QP +S Sbjct: 914 --FAKLQPNFS 922 Score = 98.6 bits (244), Expect = 3e-19 Identities = 51/88 (57%), Positives = 61/88 (69%), Gaps = 10/88 (11%) Frame = -2 Query: 575 SPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 SP+SP Y SP Y TSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+ Sbjct: 791 SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 850 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S YSP+ P YSP+S S Y+P Sbjct: 851 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 877 Score = 88.2 bits (217), Expect = 4e-16 Identities = 47/79 (59%), Positives = 56/79 (70%), Gaps = 2/79 (2%) Frame = -2 Query: 572 PSSPYSPTSP-SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 P SP SPTSP +Y TSP+Y SP Y +SPTYSP+SP S TSP YSP+SP +SP S Sbjct: 787 PGSP-SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 845 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 846 SYSPTSPSYSPTSPS-YSP 863 [70][TOP] >UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) n=1 Tax=Pan troglodytes RepID=UPI0000E24648 Length = 1913 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 114 bits (286), Expect = 4e-24 Identities = 59/96 (61%), Positives = 70/96 (72%), Gaps = 15/96 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723 Query: 404 -------------STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSPSS +YTP++ Sbjct: 1724 SQSYHPTVVDSSTSPSYSPTSPSYSPSS-PRYTPQS 1758 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1802 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1861 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1862 TSPKYSPTSPTYSPTSPKGSTYSP 1885 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1761 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1820 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1821 SPTYSPTTPKYSPTSPT-YSP 1840 Score = 108 bits (271), Expect = 2e-22 Identities = 59/101 (58%), Positives = 70/101 (69%), Gaps = 22/101 (21%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-------------YNSGTS 441 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP +S TS Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTS 1737 Query: 440 PDYSPSSPQFSPST--------GYSPSQPGYSPSSTSQYTP 342 P YSP+SP +SPS+ Y+PS P YSPSS S Y+P Sbjct: 1738 PSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPS-YSP 1777 Score = 108 bits (270), Expect = 3e-22 Identities = 58/96 (60%), Positives = 69/96 (71%), Gaps = 8/96 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702 Query: 404 STGYSPSQP---GYSPS---STSQYTPKTNDNKDDP 315 S YSP+ P SPS ++ Y P D+ P Sbjct: 1703 SPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSP 1738 Score = 108 bits (270), Expect = 3e-22 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 1753 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1812 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1813 TSPKYSPTSPTYSP-TTPKYSP 1833 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1789 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1848 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1849 SPKYSPTSPTYSPTS-PKYSP 1868 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1816 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1875 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1876 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1908 Score = 105 bits (262), Expect = 3e-21 Identities = 57/94 (60%), Positives = 66/94 (70%), Gaps = 15/94 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSP-------------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 +SP+SP YSPTSPSYSP TSPSYSPTSPSYSPSSP Y+P SP + +S Sbjct: 1706 YSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPSYSPSSPRYTPQSPTYTPSS 1765 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSPSSP +SP S Y+P+ P YSPSS +YTP Sbjct: 1766 PSYSPSSPSYSPTSPKYTPTSPSYSPSS-PEYTP 1798 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1781 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1840 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1841 TSPVYTPTSPKYSPTSPT-YSP 1861 Score = 102 bits (254), Expect = 2e-20 Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399 S S YSPTSPSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+SP +SPS+ Sbjct: 1735 STSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSP 1794 Query: 398 GYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S +Y+P Sbjct: 1795 EYTPTSPKYSPTS-PKYSP 1812 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 100 bits (249), Expect = 8e-20 Identities = 53/94 (56%), Positives = 67/94 (71%), Gaps = 15/94 (15%) Frame = -2 Query: 578 FSPSSP-YSPTS-------------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 +SP+SP YSPTS PSYSPTSPSYSP+SP Y+P SPTY+PSSP S +S Sbjct: 1713 YSPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSS 1772 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SP+++P S YSPS P Y+P+S +Y+P Sbjct: 1773 PSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSP 1805 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1830 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1889 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1890 YSPTSPTYSLTSPAISPDDSDE 1911 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624 [71][TOP] >UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 22 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B2B Length = 1892 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1614 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1674 SPSYSPTSPSYSPTSPS-YSP 1693 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1681 SPSYSPTSPSYSPTSPS-YSP 1700 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSP 1721 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1709 SPSYSPTSPSYSPTSPS-YSP 1728 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1723 SPSYSPTSPNYSPSRPN-YTP 1742 Score = 116 bits (291), Expect = 1e-24 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S + + N P Sbjct: 1716 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1745 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1736 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S S Y+P Sbjct: 1737 RPNYTPTSPSYSPTSPS-YSP 1756 Score = 115 bits (287), Expect = 3e-24 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1757 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1758 SPKYTPTSPSYSPSS-PEYTP 1777 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1593 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1781 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1840 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1841 TSPKYSPTSPTYSPTSPKGSTYSP 1864 Score = 109 bits (273), Expect = 1e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1740 YTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1799 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1800 SPTYSPTTPKYSPTSPT-YSP 1819 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1768 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1827 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1828 SPKYSPTSPTYSPTS-PKYSP 1847 Score = 107 bits (267), Expect = 7e-22 Identities = 51/81 (62%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + TSP YSPSSP+++P Sbjct: 1719 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1778 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1779 SPKYSPTSPKYSPTS-PKYSP 1798 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1795 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1854 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1855 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1887 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1760 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1819 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1820 TSPVYTPTSPKYSPTSPT-YSP 1840 Score = 99.8 bits (247), Expect = 1e-19 Identities = 54/94 (57%), Positives = 62/94 (65%), Gaps = 16/94 (17%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 SP SP SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP S TS Sbjct: 1566 SPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1625 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1626 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1658 Score = 99.0 bits (245), Expect = 2e-19 Identities = 55/104 (52%), Positives = 63/104 (60%), Gaps = 26/104 (25%) Frame = -2 Query: 575 SPSSPYS-------------------------PTSPSYSPTSPSYSPTSPSYSPSSPTYS 471 +P SP S P SPSYSPTSPSYSPTSPSYSP+SP YS Sbjct: 1563 TPGSPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYS 1622 Query: 470 PSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P+SP S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1623 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1665 Score = 98.2 bits (243), Expect = 4e-19 Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423 +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP +YSPSSP + TSP YSP+ Sbjct: 1726 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPT 1785 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP++SP S YSP+ P YSP +T +Y+P Sbjct: 1786 SPKYSPTSPKYSPTSPTYSP-TTPKYSP 1812 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1809 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1868 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1869 YSPTSPTYSLTSPAISPDDSDE 1890 Score = 56.2 bits (134), Expect = 2e-06 Identities = 41/92 (44%), Positives = 48/92 (52%), Gaps = 13/92 (14%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPT-----------SPSYSPSSPTYSPSSPYNSGTSP 438 FSPS S S SP YSP ++SPT SPSYSP+SP Y P SP Sbjct: 1541 FSPSAASDASGFSPGYSP---AWSPTPGSPGSPGGAMSPSYSPTSPAYEPRSPGG----- 1592 Query: 437 DYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342 Y+P SP YSP+ P YSP+S S Y+P Sbjct: 1593 -YTPQSPS------YSPTSPSYSPTSPS-YSP 1616 [72][TOP] >UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 21 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B2A Length = 1896 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1618 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1677 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1678 SPSYSPTSPSYSPTSPS-YSP 1697 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1685 SPSYSPTSPSYSPTSPS-YSP 1704 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1706 SPSYSPTSPSYSPTSPS-YSP 1725 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1653 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1712 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1713 SPSYSPTSPSYSPTSPS-YSP 1732 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1726 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1727 SPSYSPTSPNYSPSRPN-YTP 1746 Score = 116 bits (291), Expect = 1e-24 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1719 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S + + N P Sbjct: 1720 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1749 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1681 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1740 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S S Y+P Sbjct: 1741 RPNYTPTSPSYSPTSPS-YSP 1760 Score = 115 bits (287), Expect = 3e-24 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP Sbjct: 1702 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1761 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1762 SPKYTPTSPSYSPSS-PEYTP 1781 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1597 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1657 SPSYSPTSPSYSPTSPS-YSP 1676 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1785 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1844 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1845 TSPKYSPTSPTYSPTSPKGSTYSP 1868 Score = 109 bits (273), Expect = 1e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1744 YTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1803 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1804 SPTYSPTTPKYSPTSPT-YSP 1823 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1772 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1831 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1832 SPKYSPTSPTYSPTS-PKYSP 1851 Score = 107 bits (267), Expect = 7e-22 Identities = 51/81 (62%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + TSP YSPSSP+++P Sbjct: 1723 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1782 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1783 SPKYSPTSPKYSPTS-PKYSP 1802 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1799 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1858 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1859 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1891 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1764 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1823 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1824 TSPVYTPTSPKYSPTSPT-YSP 1844 Score = 99.8 bits (247), Expect = 1e-19 Identities = 54/94 (57%), Positives = 62/94 (65%), Gaps = 16/94 (17%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 SP SP SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP S TS Sbjct: 1570 SPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1629 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1630 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1662 Score = 99.0 bits (245), Expect = 2e-19 Identities = 55/104 (52%), Positives = 63/104 (60%), Gaps = 26/104 (25%) Frame = -2 Query: 575 SPSSPYS-------------------------PTSPSYSPTSPSYSPTSPSYSPSSPTYS 471 +P SP S P SPSYSPTSPSYSPTSPSYSP+SP YS Sbjct: 1567 TPGSPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYS 1626 Query: 470 PSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P+SP S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1627 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1669 Score = 98.2 bits (243), Expect = 4e-19 Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423 +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP +YSPSSP + TSP YSP+ Sbjct: 1730 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPT 1789 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP++SP S YSP+ P YSP +T +Y+P Sbjct: 1790 SPKYSPTSPKYSPTSPTYSP-TTPKYSP 1816 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1813 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1872 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1873 YSPTSPTYSLTSPAISPDDSDE 1894 Score = 58.2 bits (139), Expect = 5e-07 Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 12/91 (13%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPS-YSPTSPSYSPS-SPTY-SPSSPYNSGTSPDYSPSSPQFS 408 +SP S +P + +SP++ S S SP YSP+ SPT SP SP SP YSP+SP + Sbjct: 1532 WSPRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSP-GGAMSPSYSPTSPAYE 1590 Query: 407 P---------STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S S Y+P Sbjct: 1591 PRSPGGYTPQSPSYSPTSPSYSPTSPS-YSP 1620 [73][TOP] >UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 20 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B29 Length = 1891 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1597 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1657 SPSYSPTSPSYSPTSPS-YSP 1676 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1604 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1664 SPSYSPTSPSYSPTSPS-YSP 1683 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1685 SPSYSPTSPSYSPTSPS-YSP 1704 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1706 SPSYSPTSPNYSPSRPN-YTP 1725 Score = 116 bits (291), Expect = 1e-24 Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1719 Query: 401 -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315 Y+P+ P YSP+S S YTP + + P Sbjct: 1720 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1755 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1576 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1635 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1636 SPSYSPTSPSYSPTSPS-YSP 1655 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1780 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1839 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1840 TSPKYSPTSPTYSPTSPKGSTYSP 1863 Score = 109 bits (272), Expect = 2e-22 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1747 Query: 404 ---------STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1748 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1776 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1767 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1826 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1827 SPKYSPTSPTYSPTS-PKYSP 1846 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1794 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1853 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1854 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1886 Score = 103 bits (258), Expect = 7e-21 Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408 +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++ Sbjct: 1716 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1775 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S +Y+P Sbjct: 1776 PTSPKYSPTSPKYSPTS-PKYSP 1797 Score = 102 bits (253), Expect = 3e-20 Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S Sbjct: 1754 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1813 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P Y+P+S +Y+P Sbjct: 1814 PTYSPTSPVYTPTS-PKYSP 1832 Score = 101 bits (251), Expect = 5e-20 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP Y+P SP+YSPT SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++S Sbjct: 1737 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1796 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S + Y+P Sbjct: 1797 PTSPTYSPTTPKYSPTSPT-YSP 1818 Score = 100 bits (250), Expect = 6e-20 Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399 SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T Sbjct: 1748 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1807 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S YTP Sbjct: 1808 KYSPTSPTYSPTS-PVYTP 1825 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1545 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1604 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1605 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1641 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1808 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1867 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1868 YSPTSPTYSLTSPAISPDDSDE 1889 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1514 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1566 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1567 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1592 [74][TOP] >UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 19 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B28 Length = 1908 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1614 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1674 SPSYSPTSPSYSPTSPS-YSP 1693 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1681 SPSYSPTSPSYSPTSPS-YSP 1700 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSP 1721 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1723 SPSYSPTSPNYSPSRPN-YTP 1742 Score = 116 bits (291), Expect = 1e-24 Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1736 Query: 401 -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315 Y+P+ P YSP+S S YTP + + P Sbjct: 1737 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1772 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1593 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1653 SPSYSPTSPSYSPTSPS-YSP 1672 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1797 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1856 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1857 TSPKYSPTSPTYSPTSPKGSTYSP 1880 Score = 109 bits (272), Expect = 2e-22 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1764 Query: 404 ---------STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1765 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1793 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1784 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1843 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1844 SPKYSPTSPTYSPTS-PKYSP 1863 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1811 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1870 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1871 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1903 Score = 103 bits (258), Expect = 7e-21 Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408 +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++ Sbjct: 1733 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1792 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S +Y+P Sbjct: 1793 PTSPKYSPTSPKYSPTS-PKYSP 1814 Score = 102 bits (253), Expect = 3e-20 Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S Sbjct: 1771 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1830 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P Y+P+S +Y+P Sbjct: 1831 PTYSPTSPVYTPTS-PKYSP 1849 Score = 101 bits (251), Expect = 5e-20 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP Y+P SP+YSPT SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++S Sbjct: 1754 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1813 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S + Y+P Sbjct: 1814 PTSPTYSPTTPKYSPTSPT-YSP 1835 Score = 100 bits (250), Expect = 6e-20 Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399 SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T Sbjct: 1765 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1824 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S YTP Sbjct: 1825 KYSPTSPTYSPTS-PVYTP 1842 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1562 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1621 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1622 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1658 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1825 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1884 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1885 YSPTSPTYSLTSPAISPDDSDE 1906 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1531 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1583 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1584 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1609 [75][TOP] >UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide A isoform 18 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B27 Length = 1831 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1547 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1606 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1607 SPSYSPTSPSYSPTSPS-YSP 1626 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1554 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1613 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1614 SPSYSPTSPSYSPTSPS-YSP 1633 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1575 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1634 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1635 SPSYSPTSPSYSPTSPS-YSP 1654 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1596 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1655 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1656 SPSYSPTSPNYSPSRPN-YTP 1675 Score = 116 bits (291), Expect = 1e-24 Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1610 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1669 Query: 401 -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315 Y+P+ P YSP+S S YTP + + P Sbjct: 1670 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1705 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1526 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1585 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1586 SPSYSPTSPSYSPTSPS-YSP 1605 Score = 110 bits (275), Expect = 8e-23 Identities = 50/80 (62%), Positives = 67/80 (83%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSP+YSP+ P+Y+P+SP+YSP+SP S TSP+Y+P SP +SP+ Sbjct: 1645 YSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1704 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSPS P Y+P+S +Y+P Sbjct: 1705 PSYSPSSPEYTPTS-PKYSP 1723 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1720 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1779 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1780 TSPKYSPTSPTYSPTSPKGSTYSP 1803 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1734 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1793 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1794 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1826 Score = 103 bits (258), Expect = 7e-21 Identities = 52/83 (62%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+ Y S +SP+Y+P+SP++SP Sbjct: 1666 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSY-SPSSPEYTPTSPKYSPT 1724 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP+S + Y+P T Sbjct: 1725 SPKYSPTSPKYSPTSPT-YSPTT 1746 Score = 102 bits (255), Expect = 2e-20 Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +SP+ YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP S Sbjct: 1701 YSPTPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTS 1760 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S + Y+P Sbjct: 1761 PVYTPTSPKYSPTSPT-YSP 1779 Score = 100 bits (248), Expect = 1e-19 Identities = 50/87 (57%), Positives = 67/87 (77%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY------NSGTSPDYSPSS 420 +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP N +P YSPSS Sbjct: 1652 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSS 1711 Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTP 342 P+++P S YSP+ P YSP+S +Y+P Sbjct: 1712 PEYTPTSPKYSPTSPKYSPTS-PKYSP 1737 Score = 97.4 bits (241), Expect = 7e-19 Identities = 49/81 (60%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPT PSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP Sbjct: 1694 YTPMSPNYSPT-PSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1752 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y+P+S +Y+P Sbjct: 1753 SPTYSPTSPVYTPTS-PKYSP 1772 Score = 94.4 bits (233), Expect = 6e-18 Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 16/94 (17%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 +P + SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP S TS Sbjct: 1499 TPGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1558 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1559 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1591 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1748 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1807 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1808 YSPTSPTYSLTSPAISPDDSDE 1829 Score = 92.0 bits (227), Expect = 3e-17 Identities = 53/88 (60%), Positives = 65/88 (73%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS P+YSPT PSYSP+SP Y+P+SP YSP+SP S TSP YSP+ Sbjct: 1680 YSPTSPSYSPTSPNYTPMSPNYSPT-PSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1738 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SP+T YSP+ P YSP+S YTP Sbjct: 1739 SPTYSPTTPKYSPTSPTYSPTS-PVYTP 1765 [76][TOP] >UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide A isoform 17 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B26 Length = 1684 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1524 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1583 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1584 SPSYSPTSPSYSPTSPS-YSP 1603 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1531 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1590 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1591 SPSYSPTSPSYSPTSPS-YSP 1610 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1612 SPSYSPTSPSYSPTSPS-YSP 1631 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1559 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1619 SPSYSPTSPSYSPTSPS-YSP 1638 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1633 SPSYSPTSPNYSPSRPN-YTP 1652 Score = 116 bits (291), Expect = 1e-24 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S + + N P Sbjct: 1626 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1655 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1646 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S S Y+P Sbjct: 1647 RPNYTPTSPSYSPTSPS-YSP 1666 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1653 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1654 SPSYSPTSPSYSPTSPN-YTP 1673 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1503 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1562 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1563 SPSYSPTSPSYSPTSPS-YSP 1582 Score = 110 bits (276), Expect = 6e-23 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSS 360 S Y+P P YSP+S Sbjct: 1668 SPNYTPMSPNYSPTS 1682 Score = 92.8 bits (229), Expect = 2e-17 Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 9/79 (11%) Frame = -2 Query: 551 TSPSYS--------PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 TSP+Y P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1491 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1550 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1551 SYSPTSPSYSPTSPS-YSP 1568 Score = 84.3 bits (207), Expect = 6e-15 Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP Sbjct: 1629 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1683 Score = 75.1 bits (183), Expect = 4e-12 Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435 +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+ Sbjct: 1636 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1684 [77][TOP] >UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide A isoform 16 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B25 Length = 1752 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1524 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1583 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1584 SPSYSPTSPSYSPTSPS-YSP 1603 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1531 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1590 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1591 SPSYSPTSPSYSPTSPS-YSP 1610 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1612 SPSYSPTSPSYSPTSPS-YSP 1631 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1633 SPSYSPTSPNYSPSRPN-YTP 1652 Score = 116 bits (291), Expect = 1e-24 Identities = 58/92 (63%), Positives = 72/92 (78%), Gaps = 2/92 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1646 Query: 401 -TGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309 Y+P+ P YSP+S S Y+P + + P + Sbjct: 1647 RPNYTPTSPSYSPTSPS-YSPTSPNYTYSPSS 1677 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1503 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1562 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1563 SPSYSPTSPSYSPTSPS-YSP 1582 Score = 113 bits (283), Expect = 9e-24 Identities = 56/84 (66%), Positives = 68/84 (80%), Gaps = 5/84 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP+ Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1667 Query: 401 T---GYSPSQPGYSPSSTS-QYTP 342 + YSPS P YSP+S + +Y+P Sbjct: 1668 SPNYTYSPSSPSYSPTSPNPKYSP 1691 Score = 97.4 bits (241), Expect = 7e-19 Identities = 56/89 (62%), Positives = 68/89 (76%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPD--YSPSSPQ 414 +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP TYSPSSP S TSP+ YSP+SP Sbjct: 1636 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPN 1695 Query: 413 --FSP-STGYSPSQPGYSPSST--SQYTP 342 +SP S YSP+ P YSP+S S Y+P Sbjct: 1696 PTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1724 Score = 96.7 bits (239), Expect = 1e-18 Identities = 50/87 (57%), Positives = 66/87 (75%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP--YNSGTSPDYSPSSPQ-- 414 +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP S +SP YSP+SP Sbjct: 1629 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPK 1688 Query: 413 ---FSPSTGYSPSQPGYSPSSTSQYTP 342 SP+ YSP+ P YSP+S + Y+P Sbjct: 1689 YSPTSPNPTYSPTSPKYSPTSPT-YSP 1714 Score = 94.7 bits (234), Expect = 5e-18 Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 14/101 (13%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY--SPTSPSYSPSSP-----------TYSPSSPYNSGTS 441 ++P+SP YSPTSPSYSPTSP+Y SP+SPSYSP+SP TYSP+SP S TS Sbjct: 1650 YTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTSPKYSPTS 1709 Query: 440 PDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 P YSP+SP+ S YSP+ PGYSP+S + + DD Sbjct: 1710 PTYSPTSPKGST---YSPTSPGYSPTSPTYSLTSPAISPDD 1747 Score = 92.8 bits (229), Expect = 2e-17 Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 9/79 (11%) Frame = -2 Query: 551 TSPSYS--------PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 TSP+Y P SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1491 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1550 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1551 SYSPTSPSYSPTSPS-YSP 1568 Score = 84.7 bits (208), Expect = 5e-15 Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 11/87 (12%) Frame = -2 Query: 578 FSPSSP---YSPTSPSYSPTSPS--YSPTSPS--YSPSSPTYSPSSPYNSGTSP---DYS 429 +SP+SP YSP+SPSYSPTSP+ YSPTSP+ YSP+SP YSP+SP S TSP YS Sbjct: 1664 YSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTSPKYSPTSPTYSPTSPKGSTYS 1723 Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQ 351 P+SP +SP S YS + P SP + + Sbjct: 1724 PTSPGYSPTSPTYSLTSPAISPDDSDE 1750 Score = 74.3 bits (181), Expect = 6e-12 Identities = 38/62 (61%), Positives = 46/62 (74%), Gaps = 3/62 (4%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSP---TYSPSSPYNSGTSPDYSPSSPQF 411 ++SP+SP P+YSPTSP YSPTSP+YSP+SP TYSP+SP S TSP YS +SP Sbjct: 1688 KYSPTSPN----PTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1743 Query: 410 SP 405 SP Sbjct: 1744 SP 1745 [78][TOP] >UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 15 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B24 Length = 1924 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1630 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1689 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1690 SPSYSPTSPSYSPTSPS-YSP 1709 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1637 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1696 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1697 SPSYSPTSPSYSPTSPS-YSP 1716 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1658 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1717 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1718 SPSYSPTSPSYSPTSPS-YSP 1737 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1679 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1738 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1739 SPSYSPTSPNYSPSRPN-YTP 1758 Score = 116 bits (291), Expect = 1e-24 Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1693 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1752 Query: 401 -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315 Y+P+ P YSP+S S YTP + + P Sbjct: 1753 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1788 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1609 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1668 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1669 SPSYSPTSPSYSPTSPS-YSP 1688 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1813 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1872 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1873 TSPKYSPTSPTYSPTSPKGSTYSP 1896 Score = 109 bits (272), Expect = 2e-22 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P Sbjct: 1721 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1780 Query: 404 ---------STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1781 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1809 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1800 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1859 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1860 SPKYSPTSPTYSPTS-PKYSP 1879 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1827 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1886 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1887 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1919 Score = 103 bits (258), Expect = 7e-21 Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408 +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++ Sbjct: 1749 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1808 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S +Y+P Sbjct: 1809 PTSPKYSPTSPKYSPTS-PKYSP 1830 Score = 102 bits (253), Expect = 3e-20 Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S Sbjct: 1787 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1846 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P Y+P+S +Y+P Sbjct: 1847 PTYSPTSPVYTPTS-PKYSP 1865 Score = 101 bits (251), Expect = 5e-20 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP Y+P SP+YSPT SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++S Sbjct: 1770 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1829 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S + Y+P Sbjct: 1830 PTSPTYSPTTPKYSPTSPT-YSP 1851 Score = 100 bits (250), Expect = 6e-20 Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399 SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T Sbjct: 1781 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1840 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S YTP Sbjct: 1841 KYSPTSPTYSPTS-PVYTP 1858 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1578 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1637 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1638 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1674 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1841 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1900 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1901 YSPTSPTYSLTSPAISPDDSDE 1922 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1547 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1599 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1600 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1625 [79][TOP] >UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide A isoform 14 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B23 Length = 1653 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1493 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1552 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1553 SPSYSPTSPSYSPTSPS-YSP 1572 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1500 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1559 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1560 SPSYSPTSPSYSPTSPS-YSP 1579 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1521 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1580 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1581 SPSYSPTSPSYSPTSPS-YSP 1600 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1528 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1587 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1588 SPSYSPTSPSYSPTSPS-YSP 1607 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1542 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1602 SPSYSPTSPNYSPSRPN-YTP 1621 Score = 116 bits (291), Expect = 1e-24 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1535 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S + + N P Sbjct: 1595 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1624 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1615 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S S Y+P Sbjct: 1616 RPNYTPTSPSYSPTSPS-YSP 1635 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P Sbjct: 1563 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1622 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1623 SPSYSPTSPSYSPTSPN-YTP 1642 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1472 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1531 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1532 SPSYSPTSPSYSPTSPS-YSP 1551 Score = 110 bits (276), Expect = 6e-23 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1636 Query: 404 STGYSPSQPGYSPSS 360 S Y+P P YSP+S Sbjct: 1637 SPNYTPMSPNYSPTS 1651 Score = 102 bits (254), Expect = 2e-20 Identities = 55/92 (59%), Positives = 62/92 (67%), Gaps = 16/92 (17%) Frame = -2 Query: 569 SSPYSPTS---------------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435 S YSPTS PSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1513 Query: 434 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1544 Score = 84.3 bits (207), Expect = 6e-15 Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP Sbjct: 1598 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1652 Score = 75.1 bits (183), Expect = 4e-12 Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435 +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+ Sbjct: 1605 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1653 [80][TOP] >UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 12 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B21 Length = 1922 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1716 SPSYSPTSPSYSPTSPS-YSP 1735 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1737 SPSYSPTSPNYSPSRPN-YTP 1756 Score = 116 bits (291), Expect = 1e-24 Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1750 Query: 401 -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315 Y+P+ P YSP+S S YTP + + P Sbjct: 1751 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1786 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1811 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1870 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1871 TSPKYSPTSPTYSPTSPKGSTYSP 1894 Score = 109 bits (272), Expect = 2e-22 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P Sbjct: 1719 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1778 Query: 404 ---------STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1779 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1807 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1798 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1857 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1858 SPKYSPTSPTYSPTS-PKYSP 1877 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1825 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1884 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1885 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1917 Score = 103 bits (258), Expect = 7e-21 Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408 +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++ Sbjct: 1747 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1806 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S +Y+P Sbjct: 1807 PTSPKYSPTSPKYSPTS-PKYSP 1828 Score = 102 bits (253), Expect = 3e-20 Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S Sbjct: 1785 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1844 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P Y+P+S +Y+P Sbjct: 1845 PTYSPTSPVYTPTS-PKYSP 1863 Score = 101 bits (251), Expect = 5e-20 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP Y+P SP+YSPT SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++S Sbjct: 1768 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1827 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S + Y+P Sbjct: 1828 PTSPTYSPTTPKYSPTSPT-YSP 1849 Score = 100 bits (250), Expect = 6e-20 Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399 SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T Sbjct: 1779 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1838 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S YTP Sbjct: 1839 KYSPTSPTYSPTS-PVYTP 1856 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1839 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1898 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1899 YSPTSPTYSLTSPAISPDDSDE 1920 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1545 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1597 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1598 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1623 [81][TOP] >UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 11 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B20 Length = 1923 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1738 SPSYSPTSPNYSPSRPN-YTP 1757 Score = 116 bits (291), Expect = 1e-24 Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1751 Query: 401 -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315 Y+P+ P YSP+S S YTP + + P Sbjct: 1752 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1787 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1812 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1871 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1872 TSPKYSPTSPTYSPTSPKGSTYSP 1895 Score = 109 bits (272), Expect = 2e-22 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1779 Query: 404 ---------STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1780 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1808 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1799 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1858 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1859 SPKYSPTSPTYSPTS-PKYSP 1878 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1826 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1885 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1886 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1918 Score = 103 bits (258), Expect = 7e-21 Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408 +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++ Sbjct: 1748 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1807 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S +Y+P Sbjct: 1808 PTSPKYSPTSPKYSPTS-PKYSP 1829 Score = 102 bits (253), Expect = 3e-20 Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S Sbjct: 1786 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1845 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P Y+P+S +Y+P Sbjct: 1846 PTYSPTSPVYTPTS-PKYSP 1864 Score = 101 bits (251), Expect = 5e-20 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP Y+P SP+YSPT SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++S Sbjct: 1769 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1828 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S + Y+P Sbjct: 1829 PTSPTYSPTTPKYSPTSPT-YSP 1850 Score = 100 bits (250), Expect = 6e-20 Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399 SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T Sbjct: 1780 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1839 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S YTP Sbjct: 1840 KYSPTSPTYSPTS-PVYTP 1857 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1840 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1899 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1900 YSPTSPTYSLTSPAISPDDSDE 1921 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624 [82][TOP] >UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide A isoform 10 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B1F Length = 1840 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1562 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1621 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1622 SPSYSPTSPSYSPTSPS-YSP 1641 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1569 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1628 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1629 SPSYSPTSPSYSPTSPS-YSP 1648 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1590 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1649 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1650 SPSYSPTSPSYSPTSPS-YSP 1669 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1597 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1657 SPSYSPTSPSYSPTSPS-YSP 1676 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1611 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1670 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1671 SPSYSPTSPNYSPSRPN-YTP 1690 Score = 116 bits (291), Expect = 1e-24 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1604 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S + + N P Sbjct: 1664 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1693 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1684 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S S Y+P Sbjct: 1685 RPNYTPTSPSYSPTSPS-YSP 1704 Score = 115 bits (287), Expect = 3e-24 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1705 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1706 SPKYTPTSPSYSPSS-PEYTP 1725 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1541 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1600 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1601 SPSYSPTSPSYSPTSPS-YSP 1620 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1729 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1788 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1789 TSPKYSPTSPTYSPTSPKGSTYSP 1812 Score = 109 bits (273), Expect = 1e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1688 YTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1747 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1748 SPTYSPTTPKYSPTSPT-YSP 1767 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1716 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1775 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1776 SPKYSPTSPTYSPTS-PKYSP 1795 Score = 107 bits (267), Expect = 7e-22 Identities = 51/81 (62%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + TSP YSPSSP+++P Sbjct: 1667 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1726 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1727 SPKYSPTSPKYSPTS-PKYSP 1746 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1743 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1802 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1803 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1835 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1708 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1767 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1768 TSPVYTPTSPKYSPTSPT-YSP 1788 Score = 98.2 bits (243), Expect = 4e-19 Identities = 53/88 (60%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423 +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP +YSPSSP + TSP YSP+ Sbjct: 1674 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPT 1733 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP++SP S YSP+ P YSP +T +Y+P Sbjct: 1734 SPKYSPTSPKYSPTSPTYSP-TTPKYSP 1760 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1757 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1816 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1817 YSPTSPTYSLTSPAISPDDSDE 1838 Score = 68.2 bits (165), Expect = 5e-10 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSPYSPTSP-SYSPTSPSYSPTSPSYSPSSPT--------YSPSSPYNSGTSPDYSP 426 +SP+ +P SP S P+SP YSP+SP Y+P SP S TSP YSP Sbjct: 1498 YSPAWSPTPGSPGSPGPSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSP 1557 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1558 TSPSYSPTSPNYSPTSPSYSPTSPS-YSP 1585 Score = 54.3 bits (129), Expect = 7e-06 Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 2/71 (2%) Frame = -2 Query: 548 SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPG 375 SP YSP ++SPT S P SP PSSPY YSP+SP + P + GY+P P Sbjct: 1495 SPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPS 1547 Query: 374 YSPSSTSQYTP 342 YSP+S S Y+P Sbjct: 1548 YSPTSPS-YSP 1557 [83][TOP] >UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide A isoform 9 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B1E Length = 1851 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1566 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1633 SPSYSPTSPSYSPTSPS-YSP 1652 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1661 SPSYSPTSPSYSPTSPS-YSP 1680 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1675 SPSYSPTSPNYSPSRPN-YTP 1694 Score = 116 bits (291), Expect = 1e-24 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S + + N P Sbjct: 1668 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1697 Score = 116 bits (291), Expect = 1e-24 Identities = 57/83 (68%), Positives = 69/83 (83%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1688 Query: 401 -TGYSPSQPGYSPSSTSQYTPKT 336 Y+P+ P YSP+S S Y+P + Sbjct: 1689 RPNYTPTSPSYSPTSPS-YSPSS 1710 Score = 115 bits (287), Expect = 3e-24 Identities = 57/81 (70%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSPSSP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1717 SPKYTPTSPSYSPSS-PEYTP 1736 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1545 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1605 SPSYSPTSPSYSPTSPS-YSP 1624 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1740 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1799 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1800 TSPKYSPTSPTYSPTSPKGSTYSP 1823 Score = 109 bits (273), Expect = 1e-22 Identities = 53/81 (65%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 1678 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1738 SPKYSPTSPKYSPTS-PKYSP 1757 Score = 109 bits (273), Expect = 1e-22 Identities = 53/81 (65%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 1692 YTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1751 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1752 SPKYSPTSPTYSP-TTPKYSP 1771 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1727 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1786 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1787 SPKYSPTSPTYSPTS-PKYSP 1806 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1754 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1813 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1814 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1846 Score = 104 bits (259), Expect = 6e-21 Identities = 50/81 (61%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP Sbjct: 1713 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1772 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y+P+S +Y+P Sbjct: 1773 SPTYSPTSPVYTPTS-PKYSP 1792 Score = 103 bits (257), Expect = 1e-20 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSPTSPSYSPTSPSYSP+SP+YSP+SP S + P+Y+P+ Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1695 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S YSPS P YSP+S +YTP Sbjct: 1696 SPSYSPTSPSYSPSSPSYSPTS-PKYTP 1722 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1514 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1573 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1574 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1610 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1768 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1827 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1828 YSPTSPTYSLTSPAISPDDSDE 1849 Score = 60.1 bits (144), Expect = 1e-07 Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 23/92 (25%) Frame = -2 Query: 548 SPSYSPTSPSYSPTSPS--YSPS-----SPTYSPS---------------SPYNSGTSPD 435 SP++SPT S PS Y PS SP+YSP+ SP S TSP Sbjct: 1499 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1558 Query: 434 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1559 YSPTSPSYSPTSPNYSPTSPSYSPTSPS-YSP 1589 Score = 56.2 bits (134), Expect = 2e-06 Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 6/75 (8%) Frame = -2 Query: 548 SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--GYSP 387 SP YSP ++SPT S P SP PSSPY SP YSP+SP + P + GY+P Sbjct: 1495 SPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTP 1547 Query: 386 SQPGYSPSSTSQYTP 342 P YSP+S S Y+P Sbjct: 1548 QSPSYSPTSPS-YSP 1561 [84][TOP] >UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 1 n=2 Tax=Canis lupus familiaris RepID=UPI00005A0B1D Length = 1764 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1604 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1664 SPSYSPTSPSYSPTSPS-YSP 1683 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1611 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1670 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1671 SPSYSPTSPSYSPTSPS-YSP 1690 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1632 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1691 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1692 SPSYSPTSPSYSPTSPS-YSP 1711 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1639 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1698 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1699 SPSYSPTSPSYSPTSPS-YSP 1718 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1653 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1712 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1713 SPSYSPTSPNYSPSRPN-YTP 1732 Score = 116 bits (291), Expect = 1e-24 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S + + N P Sbjct: 1706 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1735 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1726 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S S Y+P Sbjct: 1727 RPNYTPTSPSYSPTSPS-YSP 1746 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P Sbjct: 1674 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1733 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1734 SPSYSPTSPSYSPTSPN-YTP 1753 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1583 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1642 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1643 SPSYSPTSPSYSPTSPS-YSP 1662 Score = 110 bits (276), Expect = 6e-23 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1747 Query: 404 STGYSPSQPGYSPSS 360 S Y+P P YSP+S Sbjct: 1748 SPNYTPMSPNYSPTS 1762 Score = 102 bits (254), Expect = 2e-20 Identities = 55/92 (59%), Positives = 62/92 (67%), Gaps = 16/92 (17%) Frame = -2 Query: 569 SSPYSPTS---------------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435 S YSPTS PSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP Sbjct: 1565 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1624 Query: 434 YSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1655 Score = 84.3 bits (207), Expect = 6e-15 Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP Sbjct: 1709 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1763 Score = 75.1 bits (183), Expect = 4e-12 Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435 +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+ Sbjct: 1716 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1764 [85][TOP] >UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide A isoform 8 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B1C Length = 1719 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1559 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1619 SPSYSPTSPSYSPTSPS-YSP 1638 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1647 SPSYSPTSPSYSPTSPS-YSP 1666 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1668 SPSYSPTSPNYSPSRPN-YTP 1687 Score = 116 bits (291), Expect = 1e-24 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S + + N P Sbjct: 1661 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1690 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1681 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S S Y+P Sbjct: 1682 RPNYTPTSPSYSPTSPS-YSP 1701 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1689 SPSYSPTSPSYSPTSPN-YTP 1708 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1538 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1598 SPSYSPTSPSYSPTSPS-YSP 1617 Score = 110 bits (276), Expect = 6e-23 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1702 Query: 404 STGYSPSQPGYSPSS 360 S Y+P P YSP+S Sbjct: 1703 SPNYTPMSPNYSPTS 1717 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1507 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1566 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1567 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603 Score = 84.3 bits (207), Expect = 6e-15 Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP Sbjct: 1664 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1718 Score = 75.1 bits (183), Expect = 4e-12 Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435 +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+ Sbjct: 1671 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1719 Score = 61.2 bits (147), Expect = 6e-08 Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 24/100 (24%) Frame = -2 Query: 569 SSPYSPT-SPSYSPTSPSYSPTSPS--YSPS-----SPTYSPS---------------SP 459 +S +SP SP++SPT S PS Y PS SP+YSP+ SP Sbjct: 1484 ASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSP 1543 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1544 SYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS-YSP 1582 Score = 57.0 bits (136), Expect = 1e-06 Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 7/78 (8%) Frame = -2 Query: 554 PTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--G 396 P + +SP SP++SPT S P SP PSSPY SP YSP+SP + P + G Sbjct: 1482 PDASGFSPGYSPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGG 1537 Query: 395 YSPSQPGYSPSSTSQYTP 342 Y+P P YSP+S S Y+P Sbjct: 1538 YTPQSPSYSPTSPS-YSP 1554 [86][TOP] >UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide A isoform 7 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B1B Length = 1858 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1559 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1619 SPSYSPTSPSYSPTSPS-YSP 1638 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1626 SPSYSPTSPSYSPTSPS-YSP 1645 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1647 SPSYSPTSPSYSPTSPS-YSP 1666 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1668 SPSYSPTSPNYSPSRPN-YTP 1687 Score = 116 bits (291), Expect = 1e-24 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S + + N P Sbjct: 1661 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1690 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1681 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S S Y+P Sbjct: 1682 RPNYTPTSPSYSPTSPS-YSP 1701 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1689 SPSYSPTSPSYSPTSPN-YTP 1708 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1538 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1598 SPSYSPTSPSYSPTSPS-YSP 1617 Score = 113 bits (282), Expect = 1e-23 Identities = 56/81 (69%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1702 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P P YSP+S S Y+P Sbjct: 1703 SPNYTPMSPNYSPTSPS-YSP 1722 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1747 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1806 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1807 TSPKYSPTSPTYSPTSPKGSTYSP 1830 Score = 108 bits (271), Expect = 2e-22 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1706 YTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1765 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1766 SPTYSPTTPKYSPTSPT-YSP 1785 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1734 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1793 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1794 SPKYSPTSPTYSPTS-PKYSP 1813 Score = 107 bits (268), Expect = 5e-22 Identities = 52/81 (64%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP Y+P SP+YSPTSPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 1699 YSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1759 SPKYSPTSPTYSP-TTPKYSP 1778 Score = 107 bits (267), Expect = 7e-22 Identities = 51/81 (62%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1724 SPKYTPTSPSYSPSS-PEYTP 1743 Score = 107 bits (267), Expect = 7e-22 Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+SP S TSP Y+P+SP +SPS Sbjct: 1678 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPS 1737 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 + Y+P+ P YSP+S +Y+P Sbjct: 1738 SPEYTPTSPKYSPTS-PKYSP 1757 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1761 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1820 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1821 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1853 Score = 106 bits (265), Expect = 1e-21 Identities = 51/81 (62%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP YSP+SP+++P Sbjct: 1671 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPT 1730 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSPS P Y+P+S +Y+P Sbjct: 1731 SPSYSPSSPEYTPTS-PKYSP 1750 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1726 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1785 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1786 TSPVYTPTSPKYSPTSPT-YSP 1806 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1507 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1566 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1567 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1603 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1775 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1834 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1835 YSPTSPTYSLTSPAISPDDSDE 1856 Score = 61.2 bits (147), Expect = 6e-08 Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 24/100 (24%) Frame = -2 Query: 569 SSPYSPT-SPSYSPTSPSYSPTSPS--YSPS-----SPTYSPS---------------SP 459 +S +SP SP++SPT S PS Y PS SP+YSP+ SP Sbjct: 1484 ASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSP 1543 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1544 SYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS-YSP 1582 Score = 57.0 bits (136), Expect = 1e-06 Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 7/78 (8%) Frame = -2 Query: 554 PTSPSYSPT-SPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQFSPST--G 396 P + +SP SP++SPT S P SP PSSPY SP YSP+SP + P + G Sbjct: 1482 PDASGFSPGYSPAWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGG 1537 Query: 395 YSPSQPGYSPSSTSQYTP 342 Y+P P YSP+S S Y+P Sbjct: 1538 YTPQSPSYSPTSPS-YSP 1554 [87][TOP] >UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 6 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B1A Length = 1767 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1607 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1674 SPSYSPTSPSYSPTSPS-YSP 1693 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1701 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1702 SPSYSPTSPSYSPTSPS-YSP 1721 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1716 SPSYSPTSPNYSPSRPN-YTP 1735 Score = 116 bits (291), Expect = 1e-24 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S + + N P Sbjct: 1709 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1738 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1729 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S S Y+P Sbjct: 1730 RPNYTPTSPSYSPTSPS-YSP 1749 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1736 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1737 SPSYSPTSPSYSPTSPN-YTP 1756 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1586 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1645 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1646 SPSYSPTSPSYSPTSPS-YSP 1665 Score = 110 bits (276), Expect = 6e-23 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1750 Query: 404 STGYSPSQPGYSPSS 360 S Y+P P YSP+S Sbjct: 1751 SPNYTPMSPNYSPTS 1765 Score = 84.3 bits (207), Expect = 6e-15 Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP Sbjct: 1712 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1766 Score = 75.1 bits (183), Expect = 4e-12 Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435 +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+ Sbjct: 1719 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1767 Score = 73.9 bits (180), Expect = 8e-12 Identities = 44/86 (51%), Positives = 51/86 (59%), Gaps = 9/86 (10%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPT--------YSPSSPYNSGTSPDYSPSSP 417 PSSPY P SP S SPSYSP+SP Y+P SP S TSP YSP+SP Sbjct: 1551 PSSPYIP-----SPGELSCGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSP 1605 Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S YSP+ P YSP+S S Y+P Sbjct: 1606 SYSPTSPNYSPTSPSYSPTSPS-YSP 1630 Score = 55.8 bits (133), Expect = 2e-06 Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 5/86 (5%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPS-YSPTSPSYSPS-SPTYSPSSPYNSGTSPDYSPSSPQFS- 408 +SP S +P + +SP++ S S SP YSP+ SPT P SP + G S Y PS + S Sbjct: 1507 WSPRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGSPGSPGPSSPYIPSPGELSC 1564 Query: 407 --PSTGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P Y P S YTP++ Sbjct: 1565 GAMSPSYSPTSPAYEPRSPGGYTPQS 1590 [88][TOP] >UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide A isoform 5 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B19 Length = 1693 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1533 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1592 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1593 SPSYSPTSPSYSPTSPS-YSP 1612 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1540 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1599 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1600 SPSYSPTSPSYSPTSPS-YSP 1619 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1561 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1620 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1621 SPSYSPTSPSYSPTSPS-YSP 1640 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1568 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1627 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1628 SPSYSPTSPSYSPTSPS-YSP 1647 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1582 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1641 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1642 SPSYSPTSPNYSPSRPN-YTP 1661 Score = 116 bits (291), Expect = 1e-24 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1575 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1634 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S + + N P Sbjct: 1635 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1664 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1596 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1655 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S S Y+P Sbjct: 1656 RPNYTPTSPSYSPTSPS-YSP 1675 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P Sbjct: 1603 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1662 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1663 SPSYSPTSPSYSPTSPN-YTP 1682 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1512 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1571 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1572 SPSYSPTSPSYSPTSPS-YSP 1591 Score = 110 bits (276), Expect = 6e-23 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP Sbjct: 1617 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1676 Query: 404 STGYSPSQPGYSPSS 360 S Y+P P YSP+S Sbjct: 1677 SPNYTPMSPNYSPTS 1691 Score = 94.4 bits (233), Expect = 6e-18 Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 16/94 (17%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 +P + SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP S TS Sbjct: 1485 TPGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1544 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1545 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1577 Score = 84.3 bits (207), Expect = 6e-15 Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP Sbjct: 1638 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1692 Score = 75.1 bits (183), Expect = 4e-12 Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435 +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+ Sbjct: 1645 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1693 [89][TOP] >UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 3 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B17 Length = 1788 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1716 SPSYSPTSPSYSPTSPS-YSP 1735 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1723 SPSYSPTSPSYSPTSPS-YSP 1742 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1737 SPSYSPTSPNYSPSRPN-YTP 1756 Score = 116 bits (291), Expect = 1e-24 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S + + N P Sbjct: 1730 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1759 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1750 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S S Y+P Sbjct: 1751 RPNYTPTSPSYSPTSPS-YSP 1770 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1757 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1758 SPSYSPTSPSYSPTSPN-YTP 1777 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686 Score = 110 bits (276), Expect = 6e-23 Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1771 Query: 404 STGYSPSQPGYSPSS 360 S Y+P P YSP+S Sbjct: 1772 SPNYTPMSPNYSPTS 1786 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672 Score = 84.3 bits (207), Expect = 6e-15 Identities = 37/55 (67%), Positives = 49/55 (89%), Gaps = 1/55 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SP+SP YSPTSP+YSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+SP Sbjct: 1733 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1787 Score = 75.1 bits (183), Expect = 4e-12 Identities = 34/49 (69%), Positives = 42/49 (85%), Gaps = 1/49 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435 +SP+SP YSP+ P+Y+PTSPSYSPTSPSYSP+SP Y+P SP S TSP+ Sbjct: 1740 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1788 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1545 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1597 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1598 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1623 [90][TOP] >UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit (RPB1) isoform 2 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0B16 Length = 1922 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1688 SPSYSPTSPSYSPTSPS-YSP 1707 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1695 SPSYSPTSPSYSPTSPS-YSP 1714 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1716 SPSYSPTSPSYSPTSPS-YSP 1735 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1736 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1737 SPSYSPTSPNYSPSRPN-YTP 1756 Score = 116 bits (291), Expect = 1e-24 Identities = 59/96 (61%), Positives = 71/96 (73%), Gaps = 8/96 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1750 Query: 401 -TGYSPSQPGYSPSSTS------QYTPKTNDNKDDP 315 Y+P+ P YSP+S S YTP + + P Sbjct: 1751 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTP 1786 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1667 SPSYSPTSPSYSPTSPS-YSP 1686 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1811 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1870 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1871 TSPKYSPTSPTYSPTSPKGSTYSP 1894 Score = 109 bits (272), Expect = 2e-22 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P Sbjct: 1719 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1778 Query: 404 ---------STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1779 SPNYSPTPTSPKYTPTSPSYSPSS-PEYTP 1807 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1798 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1857 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1858 SPKYSPTSPTYSPTS-PKYSP 1877 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1825 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1884 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1885 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1917 Score = 103 bits (258), Expect = 7e-21 Identities = 53/83 (63%), Positives = 66/83 (79%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--SPYNSGTSPDYSPSSPQFS 408 +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+ SP + TSP YSPSSP+++ Sbjct: 1747 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYT 1806 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S +Y+P Sbjct: 1807 PTSPKYSPTSPKYSPTS-PKYSP 1828 Score = 102 bits (253), Expect = 3e-20 Identities = 49/80 (61%), Positives = 65/80 (81%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +P+SP Y+PTSPSYSP+SP Y+PTSP YSP+SP YSP+SP S TSP YSP++P++SP S Sbjct: 1785 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1844 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P Y+P+S +Y+P Sbjct: 1845 PTYSPTSPVYTPTS-PKYSP 1863 Score = 101 bits (251), Expect = 5e-20 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP Y+P SP+YSPT SP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++S Sbjct: 1768 YSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1827 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S + Y+P Sbjct: 1828 PTSPTYSPTTPKYSPTSPT-YSP 1849 Score = 100 bits (250), Expect = 6e-20 Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST- 399 SP+ +PTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S TSP YSP+SP +SP+T Sbjct: 1779 SPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 1838 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S YTP Sbjct: 1839 KYSPTSPTYSPTS-PVYTP 1856 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1576 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1635 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1636 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1672 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1839 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1898 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1899 YSPTSPTYSLTSPAISPDDSDE 1920 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1545 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1597 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1598 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1623 [91][TOP] >UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis lupus familiaris RepID=UPI0001951285 Length = 1969 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743 Score = 117 bits (292), Expect = 8e-25 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPS + YTP Sbjct: 1738 SPSYSPTSPNYSPSRPN-YTP 1757 Score = 116 bits (291), Expect = 1e-24 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S + + N P Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSP 1760 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1751 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 Y+P+ P YSP+S S Y+P Sbjct: 1752 RPNYTPTSPSYSPTSPS-YSP 1771 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSPS P ++P Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1759 SPSYSPTSPSYSPTSPN-YTP 1778 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1668 SPSYSPTSPSYSPTSPS-YSP 1687 Score = 111 bits (278), Expect = 4e-23 Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSPS P + TSP YSP+SP +SP Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1772 Query: 404 STGYSPSQPGYSPSSTSQYT 345 S Y+P P YSP+S + T Sbjct: 1773 SPNYTPMSPNYSPTSPNSPT 1792 Score = 110 bits (276), Expect = 6e-23 Identities = 52/80 (65%), Positives = 66/80 (82%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +SP+SP SPTSPSYSPTSPSYSP+SP Y+P SPTY+PSSP S +SP YSP+SP+++P S Sbjct: 1783 YSPTSPNSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTS 1842 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSPS P Y+P+S +Y+P Sbjct: 1843 PSYSPSSPEYTPTS-PKYSP 1861 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1858 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1917 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1918 TSPKYSPTSPTYSPTSPKGSTYSP 1941 Score = 110 bits (274), Expect = 1e-22 Identities = 56/96 (58%), Positives = 68/96 (70%), Gaps = 15/96 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSPS P Y+P+SP S TSP YSP+SP ++P Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPM 1779 Query: 404 -------------STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSPSS +YTP++ Sbjct: 1780 SPNYSPTSPNSPTSPSYSPTSPSYSPSS-PRYTPQS 1814 Score = 109 bits (273), Expect = 1e-22 Identities = 57/88 (64%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SPS P Y+PTSPSYSPTSPSYSPTSP+Y+P SP YSP+SP NS TSP YSP+SP +SPS Sbjct: 1748 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP-NSPTSPSYSPTSPSYSPS 1806 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 1807 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1833 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 1817 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1876 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1877 SPTYSPTTPKYSPTSPT-YSP 1896 Score = 108 bits (270), Expect = 3e-22 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 1809 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 1868 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1869 TSPKYSPTSPTYSP-TTPKYSP 1889 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 1845 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1904 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 1905 SPKYSPTSPTYSPTS-PKYSP 1924 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1872 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1931 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1932 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1964 Score = 105 bits (261), Expect = 3e-21 Identities = 50/83 (60%), Positives = 69/83 (83%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+P SP+Y+P+SPSYSP+SPSYSP+SP Y+P+SP S +SP+Y+P+SP++SP Sbjct: 1803 YSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPT 1862 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP+S + Y+P T Sbjct: 1863 SPKYSPTSPKYSPTSPT-YSPTT 1884 Score = 104 bits (259), Expect = 6e-21 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSP+ SPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 1776 YTPMSPNYSPTSPN-SPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1834 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1835 SPKYTPTSPSYSPSS-PEYTP 1854 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 1837 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1896 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 1897 TSPVYTPTSPKYSPTSPT-YSP 1917 Score = 100 bits (249), Expect = 8e-20 Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 100 bits (248), Expect = 1e-19 Identities = 50/83 (60%), Positives = 65/83 (78%), Gaps = 5/83 (6%) Frame = -2 Query: 575 SPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 SP+SP SPTSPSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+SP +S Sbjct: 1787 SPNSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYS 1846 Query: 407 PST-GYSPSQPGYSPSSTSQYTP 342 PS+ Y+P+ P YSP+S +Y+P Sbjct: 1847 PSSPEYTPTSPKYSPTS-PKYSP 1868 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1886 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 1945 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1946 YSPTSPTYSLTSPAISPDDSDE 1967 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1546 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1598 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1599 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1624 [92][TOP] >UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae RepID=C3ZES3_BRAFL Length = 1934 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPS-YSP 1715 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1717 SPSYSPTSPSYSPTSPS-YSP 1736 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1724 SPSYSPTSPSYSPTSPS-YSP 1743 Score = 117 bits (293), Expect = 6e-25 Identities = 58/86 (67%), Positives = 71/86 (82%), Gaps = 2/86 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+Y+P+SP++SP Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDN 327 S YSP+ P YSP+S S Y+P N Sbjct: 1759 SPSYSPTSPSYSPASPS-YSPTILSN 1783 Score = 115 bits (287), Expect = 3e-24 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y+P+S +Y+P Sbjct: 1738 SPSYSPTSPNYTPTS-PKYSP 1757 Score = 114 bits (285), Expect = 5e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSP SP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1615 YSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694 Score = 111 bits (278), Expect = 4e-23 Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +P SP YSPTSPSYSPTSPSYSP SP+YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1609 TPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1669 PSYSPTSPSYSPTSPS-YSP 1687 Score = 103 bits (258), Expect = 7e-21 Identities = 51/85 (60%), Positives = 65/85 (76%), Gaps = 4/85 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSS YSP SPSYSP++P Y+PTSP YSP+SPTY+P+SP S TSP Y+P +P++SP Sbjct: 1822 YSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPT 1881 Query: 404 STGYSPSQPGYSPSST--SQYTPKT 336 S YSP+ P YSP+S S Y+P T Sbjct: 1882 SPKYSPTSPTYSPTSPKGSTYSPTT 1906 Score = 103 bits (256), Expect = 1e-20 Identities = 49/87 (56%), Positives = 69/87 (79%), Gaps = 1/87 (1%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP SP+Y+PTSP YSPTSPSY+P +P YSP+SP S TSP YSP+SP+ S Sbjct: 1842 KYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGST 1901 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNK 324 YSP+ PGYSP+S + Y+P++ +++ Sbjct: 1902 ---YSPTTPGYSPASPT-YSPESPESR 1924 Score = 102 bits (254), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SPSSP YSP+SP YSPTSP+YSP+S YSP+SP+YSPS+P + TSP YSP+SP ++P Sbjct: 1800 QYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTP 1859 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y+P T +Y+P Sbjct: 1860 TSPKYSPTSPSYTP-DTPKYSP 1880 Score = 99.8 bits (247), Expect = 1e-19 Identities = 57/113 (50%), Positives = 68/113 (60%), Gaps = 34/113 (30%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT-------------- 444 +SP+SP YSPTSP+Y+PTSP YSPTSPSYSP+SP+YSP+SP S T Sbjct: 1734 YSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTILSNLTQLQPHLTP 1793 Query: 443 -----------SPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTP 342 SP YSPSSP++SP S YSP+ P YSP ST +YTP Sbjct: 1794 VHSHVTQYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSP-STPKYTP 1845 Score = 96.7 bits (239), Expect = 1e-18 Identities = 59/113 (52%), Positives = 68/113 (60%), Gaps = 34/113 (30%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------PSSPTYSPSSPYNSGT 444 +SP+SP YSPTSPSYSPTSPSYSPTSPSYS P+SP YSP+SP S T Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPT 1765 Query: 443 SPDYSPSSPQFSPS-------------------TGYSPSQPGYSPSSTSQYTP 342 SP YSP+SP +SP+ T YSPS P YSPSS +Y+P Sbjct: 1766 SPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSS-PKYSP 1817 Score = 96.3 bits (238), Expect = 2e-18 Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 453 P+SPY P+ SPSYSP SP+ YSPTSPSYSP+SP+YSP+SP Sbjct: 1577 PASPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNY 1636 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1673 Score = 93.2 bits (230), Expect = 1e-17 Identities = 56/122 (45%), Positives = 67/122 (54%), Gaps = 40/122 (32%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPT-------------------------SPSYSPSSP 480 ++SP+SP YSPTSPSYSP SPSYSPT SP YSPSSP Sbjct: 1754 KYSPTSPSYSPTSPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSSP 1813 Query: 479 TYSPSSPYNSGTSPDYSPSSPQFSPSTG--------YSPSQPGYSPSS------TSQYTP 342 YSP+SP S +S YSP+SP +SPST YSP+ P Y+P+S + YTP Sbjct: 1814 KYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTP 1873 Query: 341 KT 336 T Sbjct: 1874 DT 1875 Score = 70.9 bits (172), Expect = 7e-11 Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 4/58 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSP---SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 ++SP+SP YSPTSP+YSPTSP +YSPT+P YSP+SPTYSP SP + T + S Sbjct: 1877 KYSPTSPKYSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSPESPESRATQEEEEDES 1934 Score = 58.2 bits (139), Expect = 5e-07 Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 13/92 (14%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSPQF 411 FSPS+ + S + SP++SPT S P SP P+SPY SP YSP+SP + Sbjct: 1545 FSPSAASDASGMSPAGYSPAWSPTPGS--PGSP--GPASPYIPSPGGPMSPSYSPASPAY 1600 Query: 410 SP---------STGYSPSQPGYSPSSTSQYTP 342 P S GYSP+ P YSP+S S Y+P Sbjct: 1601 MPRSPGGMTPQSPGYSPTSPSYSPTSPS-YSP 1631 [93][TOP] >UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN Length = 1935 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1675 SPSYSPTSPSYSPTSPS-YSP 1694 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1689 SPSYSPTSPSYSPTSPS-YSP 1708 Score = 117 bits (292), Expect = 8e-25 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP+YSP+SP ++P Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1723 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + YTP Sbjct: 1724 SPSYSPTSPSYSPTSPN-YTP 1743 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1696 SPSYSPTSPSYSPTSPN-YSP 1715 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1716 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1717 SPNYTPTSPSYSPTSPS-YSP 1736 Score = 115 bits (288), Expect = 2e-24 Identities = 55/83 (66%), Positives = 71/83 (85%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+Y+PTSPSYSP+SP+YSP+SP + TSP+YSP+SP +SP Sbjct: 1699 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSPSS +YTP++ Sbjct: 1759 SPSYSPTSPSYSPSS-PRYTPQS 1780 Score = 115 bits (287), Expect = 3e-24 Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSP-SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP SS YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1594 YSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1654 SPSYSPTSPSYSPTSPS-YSP 1673 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP YSP+SP + TSP YSP+SP +SP Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1737 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1738 SPNYTPTSPNYSPTSPS-YSP 1757 Score = 112 bits (281), Expect = 2e-23 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP Y+P SP + +SP YSPSSP +SP Sbjct: 1741 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1800 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSPSS +YTP Sbjct: 1801 SPKYTPTSPPYSPSS-PEYTP 1820 Score = 112 bits (279), Expect = 3e-23 Identities = 56/88 (63%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP Y+PTSPSYSPTSPSYSPTSP+Y+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1713 YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS 1772 Query: 401 T--------GYSPSQPGYSPSSTSQYTP 342 + Y+PS P YSPSS S Y+P Sbjct: 1773 SPRYTPQSPTYTPSSPSYSPSSPS-YSP 1799 Score = 111 bits (278), Expect = 4e-23 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++P SP YSPTSPSYSPTSPSYSPTS +YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1573 YTPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1633 SPSYSPTSPSYSPTSPS-YSP 1652 Score = 110 bits (274), Expect = 1e-22 Identities = 54/84 (64%), Positives = 66/84 (78%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +FSP+SP YSPTSP YSPT P+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 1824 KFSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1883 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1884 TSPQYSPTSPTYSPTSPKGSTYSP 1907 Score = 107 bits (266), Expect = 9e-22 Identities = 52/100 (52%), Positives = 69/100 (69%), Gaps = 12/100 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT P+YSPT+P YSPTSP+YSP+SP Y+P+SP S TSP YSP+SPQ+SP Sbjct: 1831 KYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSP 1890 Query: 404 S-----------TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 1891 TSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 1930 Score = 105 bits (263), Expect = 2e-21 Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 ++PSSP YSP+SPSYSPTSP Y+PTSP YSPSSP Y+P+SP S TSP YSP+SP++SP+ Sbjct: 1783 YTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPT 1842 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S + Y+P Sbjct: 1843 GPTYSPTTPKYSPTSPT-YSP 1862 Score = 105 bits (262), Expect = 3e-21 Identities = 51/82 (62%), Positives = 67/82 (81%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP YSPSSP + TSP +SP+SP++SP Sbjct: 1775 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSP 1834 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 1835 TSPKYSPTGPTYSP-TTPKYSP 1855 Score = 102 bits (255), Expect = 2e-20 Identities = 49/81 (60%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P Sbjct: 1762 YSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPT 1821 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S +SP+ P YSP+S +Y+P Sbjct: 1822 SPKFSPTSPKYSPTS-PKYSP 1841 Score = 100 bits (248), Expect = 1e-19 Identities = 49/89 (55%), Positives = 64/89 (71%), Gaps = 9/89 (10%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP +SPTSP YSP+SP YSP+ P S T+P YSP+SP +SP Sbjct: 1803 KYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSP 1862 Query: 404 --------STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1863 TSPVYTPTSPKYSPTSPTYSPTS-PQYSP 1890 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++P+SP YSPTS P+Y+PTSP+YSPTSPSYSP+SP+YSP+SP S +SP Y+P Sbjct: 1720 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ 1779 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP ++PS+ YSPS P YSP+S +YTP Sbjct: 1780 SPTYTPSSPSYSPSSPSYSPTS-PKYTP 1806 Score = 97.4 bits (241), Expect = 7e-19 Identities = 55/98 (56%), Positives = 64/98 (65%), Gaps = 21/98 (21%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYN 453 PSSPY P+ SPSYSPT SPSYSPTSPSYSP+SP+YSP+S Sbjct: 1542 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSSNY 1601 Query: 452 SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1602 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1638 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1852 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSPTSPG 1911 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 1912 YSPTSPTYSLTSPAISPDDSDE 1933 Score = 92.8 bits (229), Expect = 2e-17 Identities = 50/88 (56%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTS-------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTS PSYSP+SP Y+P SP+Y+PSSP+YSPSSP S TSP Y+P+ Sbjct: 1748 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1807 Query: 422 SPQFSPST-GYSPSQPGYSPSSTSQYTP 342 SP +SPS+ Y+P+ P +SP+S +Y+P Sbjct: 1808 SPPYSPSSPEYTPTSPKFSPTS-PKYSP 1834 Score = 59.7 bits (143), Expect = 2e-07 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP PSSPY SP YSP+SP Sbjct: 1511 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPSSPYIPSPGGAMSPSYSPTSP 1563 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P P YSP+S S Y+P Sbjct: 1564 AYEPRSPGGYTPQSPSYSPTSPS-YSP 1589 [94][TOP] >UniRef100_O96446 DNA-directed RNA polymerase n=1 Tax=Vairimorpha necatrix RepID=O96446_9MICR Length = 1605 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1502 YSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1561 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1562 SPSYSPTSPSYSPTSPS-YSP 1581 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1495 YSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1554 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1555 SPSYSPTSPSYSPTSPS-YSP 1574 Score = 115 bits (288), Expect = 2e-24 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP Sbjct: 1467 YSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPT 1526 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1527 SPSYSPTSPSYSPTSPS-YSP 1546 Score = 115 bits (287), Expect = 3e-24 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1488 YSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1547 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1548 SPSYSPTSPSYSPTSPS-YSP 1567 Score = 112 bits (279), Expect = 3e-23 Identities = 55/82 (67%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSP-SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P +S YSPTSP+YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP Sbjct: 1459 RYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSP 1518 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1519 TSPSYSPTSPSYSPTSPS-YSP 1539 Score = 107 bits (267), Expect = 7e-22 Identities = 58/90 (64%), Positives = 67/90 (74%), Gaps = 5/90 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1509 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1568 Query: 404 STGYSPSQP---GYSPSSTSQYTPKTNDNK 324 S YSP+ P SPS + Y ND K Sbjct: 1569 SPSYSPTSPSYSPTSPSYSPTY---DNDEK 1595 Score = 86.7 bits (213), Expect = 1e-15 Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S Y Y+P + YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SP S Y Sbjct: 1450 SPAYLVEGNRYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTY 1509 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1510 SPTSPSYSPTSPS-YSP 1525 Score = 55.5 bits (132), Expect = 3e-06 Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%) Frame = -2 Query: 560 YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 384 +SP S + S +S ++SP +Y Y+P + S TSP YSP+SP +SP S YSP+ Sbjct: 1435 HSPVSENLSISSGNWSP---AYLVEGNRYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPT 1491 Query: 383 QPGYSPSSTSQYTP 342 P YSP+S + Y+P Sbjct: 1492 SPTYSPTSPT-YSP 1504 [95][TOP] >UniRef100_C8Z6G2 Rpo21p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z6G2_YEAST Length = 1733 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSP 1628 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1651 SPSYSPTSPAYSPTSPS-YSP 1670 Score = 116 bits (291), Expect = 1e-24 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691 Score = 116 bits (291), Expect = 1e-24 Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 2/91 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 S YSP+ P YSP+S + + + PG Sbjct: 1679 SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709 Score = 110 bits (276), Expect = 6e-23 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F SSP +SPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1595 SPSYSPTSPSYSPTSPS-YSP 1614 Score = 110 bits (274), Expect = 1e-22 Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 1/87 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP----- 1708 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKD 321 GYSP P YSP Q K N+N++ Sbjct: 1709 -GYSPGSPAYSPKQDEQ---KHNENEN 1731 Score = 101 bits (252), Expect = 4e-20 Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607 Score = 56.2 bits (134), Expect = 2e-06 Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 450 +SP+SP YSPTSPSYSPTSP YSP SP+YSP + NS Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732 [96][TOP] >UniRef100_C7GKZ2 Rpo21p n=2 Tax=Saccharomyces cerevisiae RepID=C7GKZ2_YEAS2 Length = 1733 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSP 1628 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1651 SPSYSPTSPAYSPTSPS-YSP 1670 Score = 116 bits (291), Expect = 1e-24 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691 Score = 116 bits (291), Expect = 1e-24 Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 2/91 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 S YSP+ P YSP+S + + + PG Sbjct: 1679 SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709 Score = 110 bits (276), Expect = 6e-23 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F SSP +SPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1595 SPSYSPTSPSYSPTSPS-YSP 1614 Score = 110 bits (274), Expect = 1e-22 Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 1/87 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP----- 1708 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKD 321 GYSP P YSP Q K N+N++ Sbjct: 1709 -GYSPGSPAYSPKQDEQ---KHNENEN 1731 Score = 101 bits (252), Expect = 4e-20 Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607 Score = 56.2 bits (134), Expect = 2e-06 Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 450 +SP+SP YSPTSPSYSPTSP YSP SP+YSP + NS Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732 [97][TOP] >UniRef100_C4VAM1 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01 RepID=C4VAM1_NOSCE Length = 1612 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1472 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1531 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1532 SPSYSPTSPSYSPTSPS-YSP 1551 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1493 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1552 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1553 SPSYSPTSPSYSPTSPS-YSP 1572 Score = 115 bits (287), Expect = 3e-24 Identities = 57/94 (60%), Positives = 68/94 (72%), Gaps = 9/94 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1573 Query: 404 -------STGYSPSQPGYSPSSTSQYTPKTNDNK 324 S YSP+ P YSP+ + K N+ K Sbjct: 1574 SPSYSPTSLSYSPTSPSYSPTGYKKDKDKKNERK 1607 Score = 114 bits (284), Expect = 7e-24 Identities = 56/79 (70%), Positives = 64/79 (81%), Gaps = 1/79 (1%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 S S YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1453 SASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1512 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1513 SYSPTSPSYSPTSPS-YSP 1530 Score = 108 bits (269), Expect = 4e-22 Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FS SP Y SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1444 FSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1503 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1504 SPSYSPTSPSYSPTSPS-YSP 1523 Score = 99.8 bits (247), Expect = 1e-19 Identities = 51/82 (62%), Positives = 62/82 (75%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP S +S SPSY SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1436 KYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1495 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1496 TSPSYSPTSPSYSPTSPS-YSP 1516 Score = 89.0 bits (219), Expect = 2e-16 Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390 S YSP +S SPSY SPSYSP+SP+YSP+SP S TSP YSP+SP +SP S YS Sbjct: 1435 SKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1494 Query: 389 PSQPGYSPSSTSQYTP 342 P+ P YSP+S S Y+P Sbjct: 1495 PTSPSYSPTSPS-YSP 1509 Score = 68.2 bits (165), Expect = 5e-10 Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Frame = -2 Query: 548 SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGY 372 SP+Y YSP +S SP+Y +SP S TSP YSP+SP +SP S YSP+ P Y Sbjct: 1427 SPAYLAEESKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1486 Query: 371 SPSSTSQYTP 342 SP+S S Y+P Sbjct: 1487 SPTSPS-YSP 1495 Score = 54.7 bits (130), Expect = 5e-06 Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 1/74 (1%) Frame = -2 Query: 560 YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 384 YSP S S S +S ++SP +Y YSP S SP Y +SP +SP S YSP+ Sbjct: 1412 YSPVSESQSISSGNWSP---AYLAEESKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPT 1468 Query: 383 QPGYSPSSTSQYTP 342 P YSP+S S Y+P Sbjct: 1469 SPSYSPTSPS-YSP 1481 [98][TOP] >UniRef100_B3LH31 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a RepID=B3LH31_YEAS1 Length = 1733 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSP 1628 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1651 SPSYSPTSPAYSPTSPS-YSP 1670 Score = 116 bits (291), Expect = 1e-24 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691 Score = 116 bits (291), Expect = 1e-24 Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 2/91 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 S YSP+ P YSP+S + + + PG Sbjct: 1679 SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709 Score = 110 bits (276), Expect = 6e-23 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F SSP +SPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1595 SPSYSPTSPSYSPTSPS-YSP 1614 Score = 110 bits (274), Expect = 1e-22 Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 1/87 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP----- 1708 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKD 321 GYSP P YSP Q K N+N++ Sbjct: 1709 -GYSPGSPAYSPKQDEQ---KHNENEN 1731 Score = 101 bits (251), Expect = 5e-20 Identities = 49/79 (62%), Positives = 63/79 (79%), Gaps = 2/79 (2%) Frame = -2 Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1589 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1590 SYSPTSPSYSPTSPS-YSP 1607 Score = 79.0 bits (193), Expect = 3e-13 Identities = 44/80 (55%), Positives = 53/80 (66%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSPYS--PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 SP Y PTSP + +SP +SPTSP+YSP+SP YSP+SP S TSP YS SPS Sbjct: 1521 SPFGAYGEPPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYS----PTSPS 1576 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1577 --YSPTSPSYSPTSPS-YSP 1593 Score = 56.2 bits (134), Expect = 2e-06 Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 450 +SP+SP YSPTSPSYSPTSP YSP SP+YSP + NS Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732 [99][TOP] >UniRef100_P04050 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Saccharomyces cerevisiae RepID=RPB1_YEAST Length = 1733 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1549 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSP 1628 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1630 SPSYSPTSPSYSPTSPS-YSP 1649 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1651 SPSYSPTSPAYSPTSPS-YSP 1670 Score = 116 bits (291), Expect = 1e-24 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1672 SPSYSPTSPSYSPTSPS-YSP 1691 Score = 116 bits (291), Expect = 1e-24 Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 2/91 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1678 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 S YSP+ P YSP+S + + + PG Sbjct: 1679 SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709 Score = 110 bits (276), Expect = 6e-23 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F SSP +SPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1595 SPSYSPTSPSYSPTSPS-YSP 1614 Score = 110 bits (274), Expect = 1e-22 Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 1/87 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP----- 1708 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKD 321 GYSP P YSP Q K N+N++ Sbjct: 1709 -GYSPGSPAYSPKQDEQ---KHNENEN 1731 Score = 101 bits (252), Expect = 4e-20 Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 +P+SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1589 PSYSPTSPSYSPTSPS-YSP 1607 Score = 56.2 bits (134), Expect = 2e-06 Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS 450 +SP+SP YSPTSPSYSPTSP YSP SP+YSP + NS Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENS 1732 [100][TOP] >UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO Length = 1752 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1686 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1687 SPSYSPTSPSYSPTSPS-YSP 1706 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1707 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1708 SPSYSPTSPSYSPTSPS-YSP 1727 Score = 117 bits (293), Expect = 6e-25 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1728 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1729 SPSYSPTSPSYSPTSPS-YSP 1748 Score = 116 bits (290), Expect = 1e-24 Identities = 56/77 (72%), Positives = 65/77 (84%), Gaps = 2/77 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1676 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1735 Query: 404 STGYSPSQPGYSPSSTS 354 S YSP+ P YSP+S S Sbjct: 1736 SPSYSPTSPSYSPTSPS 1752 Score = 114 bits (286), Expect = 4e-24 Identities = 58/88 (65%), Positives = 68/88 (77%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+ Sbjct: 1599 YSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1659 SPSYSPTSPSYSPTSPSYSPTSPS-YSP 1685 Score = 114 bits (285), Expect = 5e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYS TSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1585 YSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1645 SPSYSPTSPSYSPTSPS-YSP 1664 Score = 113 bits (283), Expect = 9e-24 Identities = 57/87 (65%), Positives = 67/87 (77%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 +SPSSP Y P+SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+S Sbjct: 1558 YSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTS 1617 Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTP 342 P +SP S YSP+ P YSP+S S Y+P Sbjct: 1618 PSYSPTSPSYSPTSPSYSPTSPS-YSP 1643 Score = 94.7 bits (234), Expect = 5e-18 Identities = 48/77 (62%), Positives = 59/77 (76%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-PSTGY 393 S YSP+SP YS TSP+Y P+SPSYSP+SP+YSP+SP S TSP YSP+SP +S S Y Sbjct: 1555 SPSYSPSSPGYS-TSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSY 1613 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S S Y+P Sbjct: 1614 SPTSPSYSPTSPS-YSP 1629 Score = 79.3 bits (194), Expect = 2e-13 Identities = 50/89 (56%), Positives = 56/89 (62%), Gaps = 13/89 (14%) Frame = -2 Query: 569 SSPY----SP--TSPSYSPTSPSYSPTSPSYSPSSPTYS------PSSPYNSGTSPDYSP 426 +SPY SP TSP S SP Y TSPSYSPSSP YS PSSP S TSP YSP Sbjct: 1528 ASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSP 1587 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP +SP S YSP+ P YS +S S Y+P Sbjct: 1588 TSPSYSPTSPSYSPTSPSYSATSPS-YSP 1615 [101][TOP] >UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR Length = 1706 Score = 117 bits (292), Expect = 8e-25 Identities = 57/89 (64%), Positives = 71/89 (79%), Gaps = 2/89 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1615 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1674 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 S YSP+ P YSP+S + Y+P D+K D Sbjct: 1675 SPAYSPTSPAYSPTSPA-YSPSGGDDKKD 1702 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1517 YSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1576 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1577 SPAYSPTSPAYSPTSPA-YSP 1596 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1538 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1597 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1598 SPAYSPTSPAYSPTSPA-YSP 1617 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1559 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1618 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1619 SPAYSPTSPAYSPTSPA-YSP 1638 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1580 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1639 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1640 SPAYSPTSPAYSPTSPA-YSP 1659 Score = 106 bits (264), Expect = 1e-21 Identities = 51/77 (66%), Positives = 61/77 (79%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1514 SPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1573 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S + Y+P Sbjct: 1574 SPTSPAYSPTSPA-YSP 1589 Score = 100 bits (248), Expect = 1e-19 Identities = 54/88 (61%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTSP+YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+ Sbjct: 1587 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1646 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S YSP+ P YSP+S + Y+P Sbjct: 1647 SPAYSPTSPAYSPTSPAYSPTSPA-YSP 1673 Score = 97.4 bits (241), Expect = 7e-19 Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 F+ S + SP+YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S Sbjct: 1504 FASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1563 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S + Y+P Sbjct: 1564 PAYSPTSPAYSPTSPA-YSP 1582 Score = 87.4 bits (215), Expect = 7e-16 Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 18/97 (18%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSP-----------------TSPSYSPTSPSYSPSSPTYSPSSPYNS 450 FSP+ + SP+YSP SP+YSPTSP YSP+SP YSP+SP S Sbjct: 1480 FSPAVGAASFSPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPAYS 1539 Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 TSP YSP+SP +SP S YSP+ P YSP+S + Y+P Sbjct: 1540 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1575 Score = 62.8 bits (151), Expect = 2e-08 Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 4/80 (5%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSP-S 402 +SP+ ++SP + S SP+YSP S +Y S Y +G SP YSP+SPQ+SP S Sbjct: 1470 ASPFVDGGAAFSPAVGAAS-FSPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTS 1528 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S + Y+P Sbjct: 1529 PAYSPTSPAYSPTSPA-YSP 1547 [102][TOP] >UniRef100_Q9BMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis RepID=Q9BMP3_MONBE Length = 1743 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1620 YSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPT 1679 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1680 SPSYSPTSPNYSPTSPS-YSP 1699 Score = 116 bits (290), Expect = 1e-24 Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP Sbjct: 1655 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1714 Query: 404 --------STGYSPSQPGYSPSSTSQYTP 342 S GYSP+ PGYSP+S Y+P Sbjct: 1715 ANGTSGPTSPGYSPTSPGYSPTSPG-YSP 1742 Score = 115 bits (288), Expect = 2e-24 Identities = 58/91 (63%), Positives = 69/91 (75%), Gaps = 9/91 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP Sbjct: 1627 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1686 Query: 404 -------STGYSPSQPGYSPSSTSQYTPKTN 333 S YSP+ P YSP+S S Y+P N Sbjct: 1687 SPNYSPTSPSYSPTSPNYSPTSPS-YSPTAN 1716 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SPSYSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP Sbjct: 1613 YSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1672 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1673 SPNYSPTSPSYSPTSPN-YSP 1692 Score = 112 bits (279), Expect = 3e-23 Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SP+SP YSPTSP YSP+SPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1607 SPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTS 1666 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1667 PSYSPTSPNYSPTSPS-YSP 1685 Score = 107 bits (266), Expect = 9e-22 Identities = 58/96 (60%), Positives = 67/96 (69%), Gaps = 17/96 (17%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPS--------YSPTSPSYSPSSPTYSPSSPYNSG 447 +SPSSP YSPTSPSYSPTSP+ YSPTSP YSPSSP+YSP+SP S Sbjct: 1577 YSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSP 1636 Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1637 TSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPS-YSP 1671 Score = 106 bits (265), Expect = 1e-21 Identities = 58/98 (59%), Positives = 68/98 (69%), Gaps = 19/98 (19%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSP--------SYSPSSPTYSPSSPYNSGTSPDYS 429 FSP+SP ++PTSP YSPTSPSYSPTSP SYSP+SP+YSPSSP + SP YS Sbjct: 1533 FSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYS 1592 Query: 428 PSSPQFSP---------STGYSPSQPGYSPSSTSQYTP 342 P+SP +SP S GYSP+ PGYSPSS S Y+P Sbjct: 1593 PTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPS-YSP 1629 Score = 100 bits (248), Expect = 1e-19 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYS 429 +SP+SP YSPTSPSYSP+SP+Y+ SP+YSP+SP+YSP+SP S TSP YS Sbjct: 1555 YSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYS 1614 Query: 428 PSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 P+SP +SPS+ YSP+ P YSP+S S Y+P Sbjct: 1615 PTSPGYSPSSPSYSPTSPNYSPTSPS-YSP 1643 Score = 95.5 bits (236), Expect = 3e-18 Identities = 48/78 (61%), Positives = 58/78 (74%), Gaps = 5/78 (6%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQF- 411 + PSSP YSPTSPSYSPTSP SPTSP +SP+SP ++P+SP+ S TSP YSP+SP Sbjct: 1504 YDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVG 1563 Query: 410 -SPSTGYSPSQPGYSPSS 360 + S YSP+ P YSPSS Sbjct: 1564 GAQSPSYSPTSPSYSPSS 1581 Score = 92.4 bits (228), Expect = 2e-17 Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 18/97 (18%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYNSGT-SPDYS 429 +SP+SP YSPTSP SPTSP +SP TSP YSP+SP+YSP+SP G SP YS Sbjct: 1512 YSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYS 1571 Query: 428 PSSPQFSPST--------GYSPSQPGYSPSSTSQYTP 342 P+SP +SPS+ YSP+ P YSP+S + +P Sbjct: 1572 PTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSP 1608 Score = 90.1 bits (222), Expect = 1e-16 Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 9/68 (13%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--------SPYNSGTSPDYSP 426 +SP+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+ SP S TSP YSP Sbjct: 1676 YSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPGYSP 1735 Query: 425 SSPQFSPS 402 +SP +SPS Sbjct: 1736 TSPGYSPS 1743 Score = 72.0 bits (175), Expect = 3e-11 Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 3/72 (4%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPS-YSPSSPTYSPSSPYNSGTSPDYSPSSPQ-FSP-STG 396 SP SP SP Y P+SP+ YSP+SP+YSP+SP S TSP +SP+SP F+P S Sbjct: 1488 SPGGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPH 1547 Query: 395 YSPSQPGYSPSS 360 YSP+ P YSP+S Sbjct: 1548 YSPTSPSYSPTS 1559 [103][TOP] >UniRef100_A9V5W6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis RepID=A9V5W6_MONBE Length = 1307 Score = 116 bits (290), Expect = 1e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1184 YSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPT 1243 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1244 SPSYSPTSPNYSPTSPS-YSP 1263 Score = 116 bits (290), Expect = 1e-24 Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP Sbjct: 1219 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1278 Query: 404 --------STGYSPSQPGYSPSSTSQYTP 342 S GYSP+ PGYSP+S Y+P Sbjct: 1279 ANGTSGPTSPGYSPTSPGYSPTSPG-YSP 1306 Score = 115 bits (288), Expect = 2e-24 Identities = 58/91 (63%), Positives = 69/91 (75%), Gaps = 9/91 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP Sbjct: 1191 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1250 Query: 404 -------STGYSPSQPGYSPSSTSQYTPKTN 333 S YSP+ P YSP+S S Y+P N Sbjct: 1251 SPNYSPTSPSYSPTSPNYSPTSPS-YSPTAN 1280 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SPSYSPTSP+YSPTSPSYSP+SP YSP+SP S TSP+YSP+SP +SP Sbjct: 1177 YSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1236 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1237 SPNYSPTSPSYSPTSPN-YSP 1256 Score = 112 bits (279), Expect = 3e-23 Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SP+SP YSPTSP YSP+SPSYSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1171 SPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTS 1230 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S S Y+P Sbjct: 1231 PSYSPTSPNYSPTSPS-YSP 1249 Score = 107 bits (266), Expect = 9e-22 Identities = 58/96 (60%), Positives = 67/96 (69%), Gaps = 17/96 (17%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPS--------YSPTSPSYSPSSPTYSPSSPYNSG 447 +SPSSP YSPTSPSYSPTSP+ YSPTSP YSPSSP+YSP+SP S Sbjct: 1141 YSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSP 1200 Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 TSP YSP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1201 TSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPS-YSP 1235 Score = 106 bits (265), Expect = 1e-21 Identities = 58/98 (59%), Positives = 68/98 (69%), Gaps = 19/98 (19%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSP--------SYSPSSPTYSPSSPYNSGTSPDYS 429 FSP+SP ++PTSP YSPTSPSYSPTSP SYSP+SP+YSPSSP + SP YS Sbjct: 1097 FSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYS 1156 Query: 428 PSSPQFSP---------STGYSPSQPGYSPSSTSQYTP 342 P+SP +SP S GYSP+ PGYSPSS S Y+P Sbjct: 1157 PTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPS-YSP 1193 Score = 100 bits (248), Expect = 1e-19 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYS 429 +SP+SP YSPTSPSYSP+SP+Y+ SP+YSP+SP+YSP+SP S TSP YS Sbjct: 1119 YSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYS 1178 Query: 428 PSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 P+SP +SPS+ YSP+ P YSP+S S Y+P Sbjct: 1179 PTSPGYSPSSPSYSPTSPNYSPTSPS-YSP 1207 Score = 95.5 bits (236), Expect = 3e-18 Identities = 48/78 (61%), Positives = 58/78 (74%), Gaps = 5/78 (6%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQF- 411 + PSSP YSPTSPSYSPTSP SPTSP +SP+SP ++P+SP+ S TSP YSP+SP Sbjct: 1068 YDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVG 1127 Query: 410 -SPSTGYSPSQPGYSPSS 360 + S YSP+ P YSPSS Sbjct: 1128 GAQSPSYSPTSPSYSPSS 1145 Score = 92.4 bits (228), Expect = 2e-17 Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 18/97 (18%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYNSGT-SPDYS 429 +SP+SP YSPTSP SPTSP +SP TSP YSP+SP+YSP+SP G SP YS Sbjct: 1076 YSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYS 1135 Query: 428 PSSPQFSPST--------GYSPSQPGYSPSSTSQYTP 342 P+SP +SPS+ YSP+ P YSP+S + +P Sbjct: 1136 PTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSP 1172 Score = 90.1 bits (222), Expect = 1e-16 Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 9/68 (13%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS--------SPYNSGTSPDYSP 426 +SP+SP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+ SP S TSP YSP Sbjct: 1240 YSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPGYSP 1299 Query: 425 SSPQFSPS 402 +SP +SPS Sbjct: 1300 TSPGYSPS 1307 Score = 72.0 bits (175), Expect = 3e-11 Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 3/72 (4%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPS-YSPSSPTYSPSSPYNSGTSPDYSPSSPQ-FSP-STG 396 SP SP SP Y P+SP+ YSP+SP+YSP+SP S TSP +SP+SP F+P S Sbjct: 1052 SPGGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPH 1111 Query: 395 YSPSQPGYSPSS 360 YSP+ P YSP+S Sbjct: 1112 YSPTSPSYSPTS 1123 [104][TOP] >UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis elegans RepID=RPB1_CAEEL Length = 1852 Score = 116 bits (290), Expect = 1e-24 Identities = 59/80 (73%), Positives = 67/80 (83%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 SP SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP +SPS+ Sbjct: 1606 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSS 1665 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSPS P YSP+S + Y+P Sbjct: 1666 PSYSPSSPRYSPTSPT-YSP 1684 Score = 114 bits (286), Expect = 4e-24 Identities = 57/77 (74%), Positives = 65/77 (84%), Gaps = 2/77 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSP+SPSYSPSSP+YSPSSP S TSP YSP+SP +SP Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPT 1692 Query: 404 STGYSPSQPGYSPSSTS 354 S YSP+ P YSP+S S Sbjct: 1693 SPTYSPTSPTYSPTSPS 1709 Score = 114 bits (285), Expect = 5e-24 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP+YSPSSP S +SP YSP+SP +SP Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPT 1685 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1686 SPTYSPTSPTYSPTSPT-YSP 1705 Score = 114 bits (285), Expect = 5e-24 Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SPSSP YSP+SPSYSP+SP YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP + Sbjct: 1654 YSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESG 1713 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 GYSPS P YSPSS + Y+P Sbjct: 1714 GGYSPSSPKYSPSSPT-YSP 1732 Score = 113 bits (283), Expect = 9e-24 Identities = 57/83 (68%), Positives = 67/83 (80%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP SP SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +S Sbjct: 1596 YSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1655 Query: 407 PST-GYSPSQPGYSPSSTSQYTP 342 PS+ YSPS P YSPSS +Y+P Sbjct: 1656 PSSPSYSPSSPSYSPSS-PRYSP 1677 Score = 110 bits (276), Expect = 6e-23 Identities = 61/99 (61%), Positives = 69/99 (69%), Gaps = 18/99 (18%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSP---------SYSPTSPSYSPSSPTYSPSSPYNS 450 +SPSSP YSPTSPSYSPTSP SYSPTSPSYSP+SP+YSP+SP S Sbjct: 1575 YSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYS 1634 Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 TSP YSP+SP +SP S YSPS P YSPSS S Y+P + Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS-YSPSS 1672 Score = 110 bits (274), Expect = 1e-22 Identities = 59/87 (67%), Positives = 67/87 (77%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSS 420 +SP+SP YSPTSP+YSPTSP+YSPTSPS YSPSSP YSPSSP S TSP YSP+S Sbjct: 1682 YSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTS 1741 Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTP 342 PQ+SP S YSPS P Y+PSS + Y P Sbjct: 1742 PQYSPTSPQYSPSSPTYTPSSPT-YNP 1767 Score = 109 bits (273), Expect = 1e-22 Identities = 57/87 (65%), Positives = 69/87 (79%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD------YSPSS 420 +SPSSP YSP+SP YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSPSS Sbjct: 1661 YSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSS 1720 Query: 419 PQFSPST-GYSPSQPGYSPSSTSQYTP 342 P++SPS+ YSP+ P YSP+S QY+P Sbjct: 1721 PKYSPSSPTYSPTSPSYSPTS-PQYSP 1746 Score = 108 bits (271), Expect = 2e-22 Identities = 57/90 (63%), Positives = 70/90 (77%), Gaps = 8/90 (8%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------YSPSSPYNSGTSPDYSPS 423 R+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP+ YSPSSP S +SP YSP+ Sbjct: 1674 RYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPT 1733 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 SP +SP S YSP+ P YSPSS + YTP + Sbjct: 1734 SPSYSPTSPQYSPTSPQYSPSSPT-YTPSS 1762 Score = 108 bits (270), Expect = 3e-22 Identities = 60/102 (58%), Positives = 72/102 (70%), Gaps = 12/102 (11%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP------SS 420 +SPSSP YSP+SP+YSPTSPSYSPTSP YSP+SP YSPSSP + +SP Y+P SS Sbjct: 1716 YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSS 1775 Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTPK----TNDNKDDPGT 309 PQ+SP S YSP+ P Y+PSS QY+P T + PGT Sbjct: 1776 PQYSPTSPTYSPTSPSYTPSS-PQYSPTSPTYTPSPSEQPGT 1816 Score = 103 bits (256), Expect = 1e-20 Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 8/89 (8%) Frame = -2 Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 ++P+SP YSPTSP+YSPTSPSY+P+SP YSP+SPTY+PS GTS YSP+S Sbjct: 1765 YNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTS 1824 Query: 419 PQFSPST-GYSPSQPGYSPSSTSQYTPKT 336 P +SPS+ YSP+ P YSPSS + Y P + Sbjct: 1825 PTYSPSSPTYSPASPSYSPSSPT-YDPNS 1852 Score = 101 bits (251), Expect = 5e-20 Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 21/102 (20%) Frame = -2 Query: 578 FSPSSP-YSPTSPSY------SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 +SP+SP YSPTSPSY SP+SP YSP+SP+YSP+SP+YSP+SP S TSP YSPSS Sbjct: 1696 YSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSS 1755 Query: 419 PQFSPST--------------GYSPSQPGYSPSSTSQYTPKT 336 P ++PS+ YSP+ P YSP+S S YTP + Sbjct: 1756 PTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPS-YTPSS 1796 Score = 69.3 bits (168), Expect = 2e-10 Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 1/55 (1%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSP-TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 ++SP+SP SPS P TS YSPTSP+YSPSSPTYSP+SP S +SP Y P+S Sbjct: 1798 QYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPTYSPASPSYSPSSPTYDPNS 1852 Score = 67.0 bits (162), Expect = 1e-09 Identities = 45/98 (45%), Positives = 56/98 (57%), Gaps = 20/98 (20%) Frame = -2 Query: 575 SPSSPYSPT-------SP----SYSPTSP-----SYSPTSPSYSPSSP-TYSPSSPYNSG 447 SP + +SP SP +SP SP + SP +PSY SP YSPSSP S Sbjct: 1525 SPGAGFSPAGNTDGGASPFNEGGWSPASPGDPLGALSPRTPSYGGMSPGVYSPSSPQFSM 1584 Query: 446 TSPDYSPSSPQFSPST---GYSPSQPGYSPSSTSQYTP 342 TSP YSP+SP +SP++ G SP P YSP+S S Y+P Sbjct: 1585 TSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPS-YSP 1621 [105][TOP] >UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis briggsae RepID=RPB1_CAEBR Length = 1853 Score = 116 bits (290), Expect = 1e-24 Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSPSSP++SP Sbjct: 1623 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPT 1682 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1683 SPTYSPTSPTYSPTSPT-YSP 1702 Score = 115 bits (288), Expect = 2e-24 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SPS Sbjct: 1616 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPS 1675 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 + YSP+ P YSP+S + Y+P Sbjct: 1676 SPRYSPTSPTYSPTSPT-YSP 1695 Score = 115 bits (288), Expect = 2e-24 Identities = 60/91 (65%), Positives = 69/91 (75%), Gaps = 12/91 (13%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSPSSP YSP+SP S TSP YSP+SP +SP+ Sbjct: 1644 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPT 1703 Query: 401 T-----------GYSPSQPGYSPSSTSQYTP 342 + GYSPS P YSPSS + Y+P Sbjct: 1704 SPTYSPTSPSYEGYSPSSPKYSPSSPT-YSP 1733 Score = 114 bits (285), Expect = 5e-24 Identities = 58/80 (72%), Positives = 66/80 (82%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SP SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1610 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1669 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSPS P YSP+S + Y+P Sbjct: 1670 PSYSPSSPRYSPTSPT-YSP 1688 Score = 110 bits (274), Expect = 1e-22 Identities = 57/87 (65%), Positives = 70/87 (80%), Gaps = 5/87 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT---YSPSSPYNSGTSPDYSPSSPQ 414 R+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP+ YSPSSP S +SP YSP+SP Sbjct: 1678 RYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPS 1737 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKT 336 +SP S YSP+ P YSPSS + YTP + Sbjct: 1738 YSPTSPQYSPTSPQYSPSSPT-YTPSS 1763 Score = 109 bits (273), Expect = 1e-22 Identities = 56/84 (66%), Positives = 69/84 (82%), Gaps = 5/84 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD---YSPSSPQF 411 +SP+SP YSP+SP YSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSPSSP++ Sbjct: 1665 YSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKY 1724 Query: 410 SPST-GYSPSQPGYSPSSTSQYTP 342 SPS+ YSP+ P YSP+S QY+P Sbjct: 1725 SPSSPTYSPTSPSYSPTS-PQYSP 1747 Score = 109 bits (273), Expect = 1e-22 Identities = 57/89 (64%), Positives = 70/89 (78%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 +SP+SP YSPTSP+YSPTSPSY SP+SP YSPSSPTYSP+SP S TSP YSP+SPQ+ Sbjct: 1693 YSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQY 1752 Query: 410 SPST-GYSPSQPGYSPS-----STSQYTP 342 SPS+ Y+PS P Y+P+ S+ QY+P Sbjct: 1753 SPSSPTYTPSSPTYNPTSPRAFSSPQYSP 1781 Score = 109 bits (273), Expect = 1e-22 Identities = 61/102 (59%), Positives = 72/102 (70%), Gaps = 12/102 (11%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP------SS 420 +SPSSP YSP+SP+YSPTSPSYSPTSP YSP+SP YSPSSP + +SP Y+P SS Sbjct: 1717 YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSS 1776 Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTPK----TNDNKDDPGT 309 PQ+SP S YSP+ P Y+PSS QY+P T D PGT Sbjct: 1777 PQYSPTSPTYSPTSPSYTPSS-PQYSPTSPTYTPSPADQPGT 1817 Score = 107 bits (267), Expect = 7e-22 Identities = 55/86 (63%), Positives = 68/86 (79%), Gaps = 5/86 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSY---SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 +SP+SP YSPTSP++ SP SPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP + Sbjct: 1592 YSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1651 Query: 410 SP-STGYSPSQPGYSPSSTSQYTPKT 336 SP S YSP+ P YSP+S S Y+P + Sbjct: 1652 SPTSPSYSPTSPSYSPTSPS-YSPSS 1676 Score = 105 bits (263), Expect = 2e-21 Identities = 63/116 (54%), Positives = 70/116 (60%), Gaps = 36/116 (31%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YN--------------- 453 ++SPSSP YSPTSPSYSPTSP YSPTSP YSPSSPTY+PSSP YN Sbjct: 1723 KYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSPT 1782 Query: 452 ----SGTSPDYSPSSPQFSP---------------STGYSPSQPGYSPSSTSQYTP 342 S TSP Y+PSSPQ+SP S YSPS P YSPSS + Y+P Sbjct: 1783 SPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPT-YSP 1837 Score = 103 bits (257), Expect = 1e-20 Identities = 52/88 (59%), Positives = 65/88 (73%), Gaps = 8/88 (9%) Frame = -2 Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 ++P+SP YSPTSP+YSPTSPSY+P+SP YSP+SPTY+PS GTS YSPSS Sbjct: 1766 YNPTSPRAFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSS 1825 Query: 419 PQFSPST-GYSPSQPGYSPSSTSQYTPK 339 P +SPS+ YSP+ P YSPSS + Y P+ Sbjct: 1826 PTYSPSSPTYSPASPSYSPSSPT-YDPQ 1852 Score = 102 bits (254), Expect = 2e-20 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 12/91 (13%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPT----------SPSYSPSSPTYSPSSPYNSGTSPDY 432 +SP+SP +S TSP YSPTSPSYSPT SPSYSP+SP+YSP+SP S TSP Y Sbjct: 1578 YSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSY 1637 Query: 431 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP+SP +SP S YSP+ P YSP+S S Y+P Sbjct: 1638 SPTSPSYSPTSPSYSPTSPSYSPTSPS-YSP 1667 Score = 72.4 bits (176), Expect = 2e-11 Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 8/61 (13%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 ++PSSP YSPTSP+Y+P TS YSP+SP+YSPSSPTYSP+SP S +SP Y P Sbjct: 1793 YTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPTYSPASPSYSPSSPTYDPQ 1852 Query: 422 S 420 + Sbjct: 1853 N 1853 Score = 65.1 bits (157), Expect = 4e-09 Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 21/99 (21%) Frame = -2 Query: 575 SPSSPYSPT-------SP----SYSPTSP-----SYSPTSPSYSPSSP-TYSPSSPYNSG 447 SPS+ +SP SP +SP SP + SP +P+Y SP YSP+SP S Sbjct: 1528 SPSAGFSPAGNLDGGASPFNEGGWSPASPGDPLGALSPRTPAYGGMSPGVYSPASPGFSM 1587 Query: 446 TSPDYSPSSPQFSPST----GYSPSQPGYSPSSTSQYTP 342 TSP YSP+SP +SP++ G SP P YSP+S S Y+P Sbjct: 1588 TSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPS-YSP 1625 [106][TOP] >UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351 Length = 2085 Score = 115 bits (289), Expect = 2e-24 Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TS YSP+SP +S Sbjct: 1692 YSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYS 1751 Query: 407 P-STGYSPSQPGYSPSSTS------QYTP 342 P S GYSP+ P YSPSS S +YTP Sbjct: 1752 PTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1780 Score = 111 bits (278), Expect = 4e-23 Identities = 58/85 (68%), Positives = 69/85 (81%), Gaps = 4/85 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP YSPTSPSY SPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+S +S Sbjct: 1685 YSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYS 1744 Query: 407 P-STGYSPSQPGYSPSSTSQYTPKT 336 P S YSP+ PGYSP+S S Y+P + Sbjct: 1745 PTSPAYSPTSPGYSPTSPS-YSPSS 1768 Score = 109 bits (273), Expect = 1e-22 Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTS +YSP+SP YSP+SP S TSP YSPSSP ++PS Sbjct: 1715 YSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPS 1774 Query: 401 T-------GYSPSQPGYSPSSTSQYTP 342 + YSPS P Y S++ Y+P Sbjct: 1775 SVKYTPSHAYSPSSPNYYSSTSPTYSP 1801 Score = 106 bits (265), Expect = 1e-21 Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 5/83 (6%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYS--PTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFS 408 SPS YSPTSPSYSPTSPSYS PTSPSYSP+SP+Y SP+SP S TSP YSP+SP +S Sbjct: 1664 SPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYS 1723 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S S Y+P Sbjct: 1724 PTSPSYSPTSPSYSPTS-SAYSP 1745 Score = 97.4 bits (241), Expect = 7e-19 Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP--DYSPSSPQ 414 +SP+SP YSPTSP Y+PTS +YSPTSPSY+P+SP +YSP+SP S TSP YSP+SP Sbjct: 1632 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPS 1691 Query: 413 F---SPSTGYSPSQPGYSPSSTSQYTP 342 + SPS YSP+ P YSP+S S Y+P Sbjct: 1692 YSPTSPSYNYSPTSPSYSPTSPS-YSP 1717 Score = 97.4 bits (241), Expect = 7e-19 Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 22/104 (21%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSP----------------- 459 +SP+SP Y+PTS +YSPTSPSY+PTSP SYSP+SP+YSP+SP Sbjct: 1639 YSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPS 1698 Query: 458 YN-SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTN 333 YN S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P ++ Sbjct: 1699 YNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1741 Score = 94.4 bits (233), Expect = 6e-18 Identities = 53/88 (60%), Positives = 63/88 (71%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGT-----SPDYSPSS 420 +SP+SP YSPTS +YSPTSP+YSPTSP YSP+SP+YSPSSP YN + S YSPSS Sbjct: 1729 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSS 1788 Query: 419 PQFSPSTG--YSPSQPGYSPSSTSQYTP 342 P + ST YSP+ P YS S S Y+P Sbjct: 1789 PNYYSSTSPTYSPTSPSYSQPSPS-YSP 1815 Score = 94.0 bits (232), Expect = 8e-18 Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 14/93 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411 +S +SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S TSP Y+P+SP + Sbjct: 1611 YSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYS 1670 Query: 410 ---------SPSTGYSPSQPGYSPSSTS-QYTP 342 SPS YSP+ P YSP+S S Y+P Sbjct: 1671 PTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1703 Score = 93.2 bits (230), Expect = 1e-17 Identities = 50/85 (58%), Positives = 59/85 (69%), Gaps = 8/85 (9%) Frame = -2 Query: 572 PSSPYSP----TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-- 411 P SP SP TSP YSP+SP YSPTS SYSP+SP YSP+SP + TS YSP+SP + Sbjct: 1603 PHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNP 1662 Query: 410 -SPSTGYSPSQPGYSPSSTS-QYTP 342 SPS YSP+ P YSP+S S Y+P Sbjct: 1663 TSPSYSYSPTSPSYSPTSPSYSYSP 1687 Score = 90.9 bits (224), Expect = 7e-17 Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 9/75 (12%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPS------SPTYSPSSP-YNSGTSPDYSPS 423 +SP+SP YSPTSP YSPTSPSYSP+SPSY+PS S YSPSSP Y S TSP YSP+ Sbjct: 1743 YSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPT 1802 Query: 422 SPQFS-PSTGYSPSQ 381 SP +S PS YSP++ Sbjct: 1803 SPSYSQPSPSYSPTR 1817 Score = 89.7 bits (221), Expect = 1e-16 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 +SP+SP Y PTS +SPTSP YS TSP YSPSSP YSP+S S TSP YSP Sbjct: 1582 YSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSP 1641 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTS-QYTP 342 +SP ++P S+ YSP+ P Y+P+S S Y+P Sbjct: 1642 TSPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1671 Score = 85.5 bits (210), Expect = 3e-15 Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSP-TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F+ SSPY+P SP YSP SP P TSPSY P+S +SP+SP S TSP YSPSSP +SP Sbjct: 1569 FTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPT 1628 Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y+P+S S Y+P Sbjct: 1629 SLSYSPTSPVYSPTSPVYNPTS-SAYSP 1655 Score = 69.7 bits (169), Expect = 2e-10 Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 2/63 (3%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQFSP 405 +SP+SP YSP+SPSY+P+S Y+P S +YSPSSP YS +SP S TSP YS SP +SP Sbjct: 1757 YSPTSPSYSPSSPSYNPSSVKYTP-SHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSP 1815 Query: 404 STG 396 + G Sbjct: 1816 TRG 1818 Score = 58.2 bits (139), Expect = 5e-07 Identities = 26/40 (65%), Positives = 34/40 (85%), Gaps = 1/40 (2%) Frame = -2 Query: 581 RFSPSSPYSPTSPS-YSPTSPSYSPTSPSYSPSSPTYSPS 465 +++PS YSP+SP+ YS TSP+YSPTSPSYS SP+YSP+ Sbjct: 1777 KYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSPT 1816 [107][TOP] >UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q5WMZ9_ORYSJ Length = 1741 Score = 115 bits (289), Expect = 2e-24 Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TS YSP+SP +S Sbjct: 1639 YSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYS 1698 Query: 407 P-STGYSPSQPGYSPSSTS------QYTP 342 P S GYSP+ P YSPSS S +YTP Sbjct: 1699 PTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1727 Score = 111 bits (278), Expect = 4e-23 Identities = 58/85 (68%), Positives = 69/85 (81%), Gaps = 4/85 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP YSPTSPSY SPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+S +S Sbjct: 1632 YSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYS 1691 Query: 407 P-STGYSPSQPGYSPSSTSQYTPKT 336 P S YSP+ PGYSP+S S Y+P + Sbjct: 1692 PTSPAYSPTSPGYSPTSPS-YSPSS 1715 Score = 106 bits (265), Expect = 1e-21 Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 5/83 (6%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYS--PTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFS 408 SPS YSPTSPSYSPTSPSYS PTSPSYSP+SP+Y SP+SP S TSP YSP+SP +S Sbjct: 1611 SPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYS 1670 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S S Y+P Sbjct: 1671 PTSPSYSPTSPSYSPTS-SAYSP 1692 Score = 106 bits (264), Expect = 1e-21 Identities = 54/79 (68%), Positives = 64/79 (81%), Gaps = 2/79 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTS +YSP+SP YSP+SP S TSP YSPSSP ++PS Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPS 1721 Query: 401 T-GYSPSQPGYSPSSTSQY 348 + Y+PS YSPSS + Y Sbjct: 1722 SVKYTPSH-AYSPSSPNYY 1739 Score = 97.4 bits (241), Expect = 7e-19 Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP--DYSPSSPQ 414 +SP+SP YSPTSP Y+PTS +YSPTSPSY+P+SP +YSP+SP S TSP YSP+SP Sbjct: 1579 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPS 1638 Query: 413 F---SPSTGYSPSQPGYSPSSTSQYTP 342 + SPS YSP+ P YSP+S S Y+P Sbjct: 1639 YSPTSPSYNYSPTSPSYSPTSPS-YSP 1664 Score = 97.4 bits (241), Expect = 7e-19 Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 22/104 (21%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSP----------------- 459 +SP+SP Y+PTS +YSPTSPSY+PTSP SYSP+SP+YSP+SP Sbjct: 1586 YSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPS 1645 Query: 458 YN-SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTN 333 YN S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P ++ Sbjct: 1646 YNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1688 Score = 94.0 bits (232), Expect = 8e-18 Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 14/93 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411 +S +SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S TSP Y+P+SP + Sbjct: 1558 YSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYS 1617 Query: 410 ---------SPSTGYSPSQPGYSPSSTS-QYTP 342 SPS YSP+ P YSP+S S Y+P Sbjct: 1618 PTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1650 Score = 93.2 bits (230), Expect = 1e-17 Identities = 50/85 (58%), Positives = 59/85 (69%), Gaps = 8/85 (9%) Frame = -2 Query: 572 PSSPYSP----TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-- 411 P SP SP TSP YSP+SP YSPTS SYSP+SP YSP+SP + TS YSP+SP + Sbjct: 1550 PHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNP 1609 Query: 410 -SPSTGYSPSQPGYSPSSTS-QYTP 342 SPS YSP+ P YSP+S S Y+P Sbjct: 1610 TSPSYSYSPTSPSYSPTSPSYSYSP 1634 Score = 89.7 bits (221), Expect = 1e-16 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 +SP+SP Y PTS +SPTSP YS TSP YSPSSP YSP+S S TSP YSP Sbjct: 1529 YSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSP 1588 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTS-QYTP 342 +SP ++P S+ YSP+ P Y+P+S S Y+P Sbjct: 1589 TSPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1618 Score = 85.5 bits (210), Expect = 3e-15 Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSP-TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F+ SSPY+P SP YSP SP P TSPSY P+S +SP+SP S TSP YSPSSP +SP Sbjct: 1516 FTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPT 1575 Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y+P+S S Y+P Sbjct: 1576 SLSYSPTSPVYSPTSPVYNPTS-SAYSP 1602 [108][TOP] >UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q0DKN9_ORYSJ Length = 1834 Score = 115 bits (289), Expect = 2e-24 Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TS YSP+SP +S Sbjct: 1692 YSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYS 1751 Query: 407 P-STGYSPSQPGYSPSSTS------QYTP 342 P S GYSP+ P YSPSS S +YTP Sbjct: 1752 PTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1780 Score = 111 bits (278), Expect = 4e-23 Identities = 58/85 (68%), Positives = 69/85 (81%), Gaps = 4/85 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP YSPTSPSY SPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+S +S Sbjct: 1685 YSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYS 1744 Query: 407 P-STGYSPSQPGYSPSSTSQYTPKT 336 P S YSP+ PGYSP+S S Y+P + Sbjct: 1745 PTSPAYSPTSPGYSPTSPS-YSPSS 1768 Score = 109 bits (273), Expect = 1e-22 Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPTS +YSP+SP YSP+SP S TSP YSPSSP ++PS Sbjct: 1715 YSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPS 1774 Query: 401 T-------GYSPSQPGYSPSSTSQYTP 342 + YSPS P Y S++ Y+P Sbjct: 1775 SVKYTPSHAYSPSSPNYYSSTSPTYSP 1801 Score = 106 bits (265), Expect = 1e-21 Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 5/83 (6%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYS--PTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFS 408 SPS YSPTSPSYSPTSPSYS PTSPSYSP+SP+Y SP+SP S TSP YSP+SP +S Sbjct: 1664 SPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYS 1723 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S S Y+P Sbjct: 1724 PTSPSYSPTSPSYSPTS-SAYSP 1745 Score = 97.4 bits (241), Expect = 7e-19 Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP--DYSPSSPQ 414 +SP+SP YSPTSP Y+PTS +YSPTSPSY+P+SP +YSP+SP S TSP YSP+SP Sbjct: 1632 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPS 1691 Query: 413 F---SPSTGYSPSQPGYSPSSTSQYTP 342 + SPS YSP+ P YSP+S S Y+P Sbjct: 1692 YSPTSPSYNYSPTSPSYSPTSPS-YSP 1717 Score = 97.4 bits (241), Expect = 7e-19 Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 22/104 (21%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSP----------------- 459 +SP+SP Y+PTS +YSPTSPSY+PTSP SYSP+SP+YSP+SP Sbjct: 1639 YSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPS 1698 Query: 458 YN-SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTN 333 YN S TSP YSP+SP +SP S YSP+ P YSP+S S Y+P ++ Sbjct: 1699 YNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-YSPTSS 1741 Score = 94.0 bits (232), Expect = 8e-18 Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 14/93 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411 +S +SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S TSP Y+P+SP + Sbjct: 1611 YSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYS 1670 Query: 410 ---------SPSTGYSPSQPGYSPSSTS-QYTP 342 SPS YSP+ P YSP+S S Y+P Sbjct: 1671 PTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1703 Score = 93.2 bits (230), Expect = 1e-17 Identities = 50/85 (58%), Positives = 59/85 (69%), Gaps = 8/85 (9%) Frame = -2 Query: 572 PSSPYSP----TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-- 411 P SP SP TSP YSP+SP YSPTS SYSP+SP YSP+SP + TS YSP+SP + Sbjct: 1603 PHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNP 1662 Query: 410 -SPSTGYSPSQPGYSPSSTS-QYTP 342 SPS YSP+ P YSP+S S Y+P Sbjct: 1663 TSPSYSYSPTSPSYSPTSPSYSYSP 1687 Score = 92.0 bits (227), Expect = 3e-17 Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSPSYSP+SPSY+PSS Y+PS Y+ + YS +SP +SP Sbjct: 1743 YSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPT 1802 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YS P YSP+S + +++P Sbjct: 1803 SPSYSQPSPSYSPTSRVEEEAHEEAEEEEP 1832 Score = 89.7 bits (221), Expect = 1e-16 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 +SP+SP Y PTS +SPTSP YS TSP YSPSSP YSP+S S TSP YSP Sbjct: 1582 YSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSP 1641 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTS-QYTP 342 +SP ++P S+ YSP+ P Y+P+S S Y+P Sbjct: 1642 TSPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1671 Score = 85.5 bits (210), Expect = 3e-15 Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSP-TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F+ SSPY+P SP YSP SP P TSPSY P+S +SP+SP S TSP YSPSSP +SP Sbjct: 1569 FTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPT 1628 Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y+P+S S Y+P Sbjct: 1629 SLSYSPTSPVYSPTSPVYNPTS-SAYSP 1655 Score = 59.7 bits (143), Expect = 2e-07 Identities = 27/41 (65%), Positives = 35/41 (85%), Gaps = 1/41 (2%) Frame = -2 Query: 581 RFSPSSPYSPTSPS-YSPTSPSYSPTSPSYSPSSPTYSPSS 462 +++PS YSP+SP+ YS TSP+YSPTSPSYS SP+YSP+S Sbjct: 1777 KYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSPTS 1817 [109][TOP] >UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U396_PHYPA Length = 1742 Score = 115 bits (289), Expect = 2e-24 Identities = 57/81 (70%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSY+PTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1592 YSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y P Sbjct: 1652 SPSYSPTSPAYSPTSPS-YAP 1671 Score = 115 bits (288), Expect = 2e-24 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTSP+YSP+SP+Y+P+SP S TSP YSP+SP +SP Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPT 1693 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSPS P YSP+S S Y+P Sbjct: 1694 SPSYSPSSPSYSPTSPS-YSP 1713 Score = 114 bits (286), Expect = 4e-24 Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSP YSPTSPSYSP+SP+Y+P+SP S TSP YSP+SP +SP Sbjct: 1578 YSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPT 1637 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1638 SPSYSPTSPSYSPTSPS-YSP 1657 Score = 114 bits (285), Expect = 5e-24 Identities = 55/91 (60%), Positives = 69/91 (75%), Gaps = 2/91 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSY+PTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1599 YSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 S YSP+ P Y+P+S + + + PG Sbjct: 1659 SPAYSPTSPSYAPTSPAYSPTSPSYSPTSPG 1689 Score = 114 bits (284), Expect = 7e-24 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSP+YSPTSPSY+P+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPS 1700 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 + YSP+ P YSP+S + Y+P Sbjct: 1701 SPSYSPTSPSYSPTSPA-YSP 1720 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSPSYSPTSPSY+P+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1585 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1644 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1645 SPSYSPTSPSYSPTSPA-YSP 1664 Score = 113 bits (283), Expect = 9e-24 Identities = 55/77 (71%), Positives = 64/77 (83%), Gaps = 2/77 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP Y+PTSP+YSPTSPSYSPTSP YSP+SP+YSPSSP S TSP YSP+SP +SP Sbjct: 1662 YSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPT 1721 Query: 404 STGYSPSQPGYSPSSTS 354 S YSPS P YSP+S S Sbjct: 1722 SPRYSPSSPSYSPTSPS 1738 Score = 113 bits (282), Expect = 1e-23 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP + TSP YSP+SP +SP Sbjct: 1571 YSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPT 1630 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1631 SPSYSPTSPSYSPTSPS-YSP 1650 Score = 112 bits (279), Expect = 3e-23 Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S TSP Y+P+SP +SP Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPT 1623 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1624 SPSYSPTSPSYSPTSPS-YSP 1643 Score = 111 bits (277), Expect = 5e-23 Identities = 56/81 (69%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSPSSP YSP+SP YSP SP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1536 FSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPT 1595 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S GYSP+ P YSP+S S Y P Sbjct: 1596 SPGYSPTSPSYSPTSPS-YAP 1615 Score = 108 bits (271), Expect = 2e-22 Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1550 YSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPT 1609 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1610 SPSYAPTSPSYSPTSPS-YSP 1629 Score = 108 bits (269), Expect = 4e-22 Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSP SP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1543 YSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPT 1602 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y+P+S S Y+P Sbjct: 1603 SPSYSPTSPSYAPTSPS-YSP 1622 Score = 107 bits (268), Expect = 5e-22 Identities = 51/71 (71%), Positives = 61/71 (85%), Gaps = 2/71 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 ++P+SP YSPTSPSYSPTSP YSPTSPSYSPSSP+YSP+SP S TSP YSP+SP++SPS Sbjct: 1669 YAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPS 1728 Query: 401 T-GYSPSQPGY 372 + YSP+ P Y Sbjct: 1729 SPSYSPTSPSY 1739 Score = 104 bits (259), Expect = 6e-21 Identities = 52/84 (61%), Positives = 64/84 (76%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSP---SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 +FSP + P+SP+SP YSP+SP YSP SP YSP+SP YSP+SP S TSP YSP+SP + Sbjct: 1526 QFSPYVGNMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGY 1585 Query: 410 SP-STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ PGYSP+S S Y+P Sbjct: 1586 SPTSPSYSPTSPGYSPTSPS-YSP 1608 Score = 92.0 bits (227), Expect = 3e-17 Identities = 47/66 (71%), Positives = 53/66 (80%), Gaps = 4/66 (6%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP---QF 411 +SP+SP YSPTSP YSPTSPSYSP+SPSYSP+SP+YSP+SP S TSP YSPSSP Sbjct: 1676 YSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPT 1735 Query: 410 SPSTGY 393 SPS Y Sbjct: 1736 SPSYRY 1741 Score = 83.2 bits (204), Expect = 1e-14 Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 4/82 (4%) Frame = -2 Query: 575 SPSSPYSPTSPS-YSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 SPS SP S + +SP + +SP+SP YSPSSP YSP SP S TSP YSP+SP +SP Sbjct: 1514 SPSLRASPLSDAQFSPYVGNMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSP 1573 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S GYSP+ PGYSP+S S Y+P Sbjct: 1574 TSPGYSPTSPGYSPTSPS-YSP 1594 [110][TOP] >UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata RepID=Q9AXN0_9RHOD Length = 1746 Score = 115 bits (288), Expect = 2e-24 Identities = 59/93 (63%), Positives = 70/93 (75%), Gaps = 12/93 (12%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSP+YSPTSP+YSP+SPTYSP+SP S TSP YSP+SP +SPS Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPS 1665 Query: 401 T-----------GYSPSQPGYSPSSTSQYTPKT 336 + YSPS P YSPSS QY+P + Sbjct: 1666 SPAMSPARAGGVSYSPSSPHYSPSS-PQYSPSS 1697 Score = 109 bits (273), Expect = 1e-22 Identities = 59/93 (63%), Positives = 70/93 (75%), Gaps = 12/93 (12%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP----------YNSGTSPDY 432 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSPSSP S +SP Y Sbjct: 1627 YSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHY 1686 Query: 431 SPSSPQFSPST-GYSPSQPGYSPSSTSQYTPKT 336 SPSSPQ+SPS+ YSPS P YSPSS QY+P + Sbjct: 1687 SPSSPQYSPSSPHYSPSSPHYSPSS-PQYSPSS 1718 Score = 109 bits (272), Expect = 2e-22 Identities = 56/81 (69%), Positives = 62/81 (76%), Gaps = 9/81 (11%) Frame = -2 Query: 575 SPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+S Sbjct: 1586 SPSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTS 1645 Query: 419 PQFSP-STGYSPSQPGYSPSS 360 P +SP S YSP+ P YSPSS Sbjct: 1646 PTYSPTSPTYSPTSPMYSPSS 1666 Score = 106 bits (264), Expect = 1e-21 Identities = 58/93 (62%), Positives = 68/93 (73%), Gaps = 12/93 (12%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSP----------SYSPSSPTYSPSSPYNSGTSPDY 432 +SP+SP YSPTSP+YSPTSP YSP+SP SYSPSSP YSPSSP S +SP Y Sbjct: 1641 YSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHY 1700 Query: 431 SPSSPQFSPST-GYSPSQPGYSPSSTSQYTPKT 336 SPSSP +SPS+ YSPS P YSPSS + Y+P + Sbjct: 1701 SPSSPHYSPSSPQYSPSSPQYSPSSPA-YSPSS 1732 Score = 106 bits (264), Expect = 1e-21 Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 12/85 (14%) Frame = -2 Query: 578 FSPSSP-YSPTSP----------SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432 +SP+SP YSP+SP SYSP+SP YSP+SP YSPSSP YSPSSP+ S +SP Y Sbjct: 1655 YSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQY 1714 Query: 431 SPSSPQFSPST-GYSPSQPGYSPSS 360 SPSSPQ+SPS+ YSPS P YSPSS Sbjct: 1715 SPSSPQYSPSSPAYSPSSPAYSPSS 1739 Score = 95.5 bits (236), Expect = 3e-18 Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SPSSP YSP+SP YSP+SP YSP+SP YSPSSP YSPSSP S +SP YSPSSP +SPS Sbjct: 1679 YSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPS 1738 Query: 401 TGYSPS 384 + PS Sbjct: 1739 SPAHPS 1744 Score = 92.0 bits (227), Expect = 3e-17 Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 1/76 (1%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390 SP SP+SP SP YSPTSP+YSP+SP+YSP+SP S TSP YSP+SP +SP S YS Sbjct: 1583 SPRSPSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYS 1642 Query: 389 PSQPGYSPSSTSQYTP 342 P+ P YSP+S + Y+P Sbjct: 1643 PTSPTYSPTSPT-YSP 1657 Score = 72.8 bits (177), Expect = 2e-11 Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 1/46 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT 444 +SPSSP YSP+SP YSP+SP YSP+SP+YSPSSP YSPSSP + T Sbjct: 1700 YSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPSSPAHPST 1745 Score = 71.6 bits (174), Expect = 4e-11 Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 5/81 (6%) Frame = -2 Query: 569 SSPYSPTSPSY----SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPYS ++ SP+SP SP YSP+SPTYSP TSP YSP+SP +SP Sbjct: 1571 ASPYSRAGNAFYSPRSPSSPGGVAASPGYSPTSPTYSP-------TSPSYSPTSPSYSPT 1623 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1624 SPAYSPTSPAYSPTSPT-YSP 1643 Score = 62.0 bits (149), Expect = 3e-08 Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 25/105 (23%) Frame = -2 Query: 581 RFSP--SSPYSPTSPSYSPTSPSY--------SPTSPSYSPSSPT----YSPSSPYNSG- 447 +FSP +SPY + S +PTSP+Y SP + SP S YSP SP + G Sbjct: 1533 QFSPFAASPYGDAAFSPTPTSPAYASPYGTAASPFNAMASPYSRAGNAFYSPRSPSSPGG 1592 Query: 446 ---------TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 TSP YSP+SP +SP S YSP+ P YSP+S + Y+P Sbjct: 1593 VAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPA-YSP 1636 [111][TOP] >UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S3M0_OSTLU Length = 1646 Score = 115 bits (287), Expect = 3e-24 Identities = 55/89 (61%), Positives = 71/89 (79%), Gaps = 2/89 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1558 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1617 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 S YSP+ P YSP+S + Y+PK + ++ Sbjct: 1618 SPAYSPTSPAYSPTSPA-YSPKEEEENEE 1645 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1523 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1582 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1583 SPAYSPTSPAYSPTSPA-YSP 1602 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1544 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1603 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1604 SPAYSPTSPAYSPTSPA-YSP 1623 [112][TOP] >UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q5I6_MALGO Length = 1607 Score = 115 bits (287), Expect = 3e-24 Identities = 57/85 (67%), Positives = 67/85 (78%), Gaps = 2/85 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1499 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1558 Query: 404 -STGYSPSQPGYSPSSTSQYTPKTN 333 S YSP+ P YSP+S QY+P N Sbjct: 1559 TSPQYSPTSPQYSPTS-PQYSPSGN 1582 Score = 114 bits (284), Expect = 7e-24 Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1478 KYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1537 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1538 TSPQYSPTSPQYSPTS-PQYSP 1558 Score = 104 bits (259), Expect = 6e-21 Identities = 56/94 (59%), Positives = 66/94 (70%), Gaps = 15/94 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPS-------------YSPTSPSYSPSSPTYSPSSPYNSGTS 441 +SP+SP YSPTSP YSPTSP+ YSPTSP YSP+SP YSP+SP S TS Sbjct: 1445 YSPTSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTS 1504 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SPQ+SP S YSP+ P YSP+S QY+P Sbjct: 1505 PQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1537 Score = 104 bits (259), Expect = 6e-21 Identities = 56/94 (59%), Positives = 66/94 (70%), Gaps = 15/94 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 +SP+SP YSPTSP+ YSPTSP YSPTSP YSP+SP YSP+SP S TS Sbjct: 1452 YSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1511 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SPQ+SP S YSP+ P YSP+S QY+P Sbjct: 1512 PQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1544 Score = 99.4 bits (246), Expect = 2e-19 Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 3/75 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1520 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1579 Query: 404 S--TGYSPSQPGYSP 366 S G S + SP Sbjct: 1580 SGNVGASAASGAASP 1594 Score = 95.5 bits (236), Expect = 3e-18 Identities = 55/107 (51%), Positives = 65/107 (60%), Gaps = 28/107 (26%) Frame = -2 Query: 578 FSPSSPY--------------SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN---- 453 +SPSSP SP SP+YSPTSP YSPTSP+YSP+SP YSP+SP Sbjct: 1411 YSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYSPTSPAGPRGR 1470 Query: 452 ---------SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SPQ+SP S YSP+ P YSP+S QY+P Sbjct: 1471 RLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS-PQYSP 1516 Score = 84.7 bits (208), Expect = 5e-15 Identities = 53/116 (45%), Positives = 65/116 (56%), Gaps = 37/116 (31%) Frame = -2 Query: 578 FSPSSP----------YSPTSPSYSPTSP-------------SYSPTSPSYSPSSPTYSP 468 +SP+SP YSPTSPSYSP+SP SP SP+YSP+SP YSP Sbjct: 1388 YSPTSPRIFAGATSPSYSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSP 1447 Query: 467 SSPYNSGTSPDYSPSS-------------PQFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S TSP YSP+S P++SP S YSP+ P YSP+S QY+P Sbjct: 1448 TSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTS-PQYSP 1502 Score = 72.8 bits (177), Expect = 2e-11 Identities = 46/119 (38%), Positives = 57/119 (47%), Gaps = 47/119 (39%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYS---------------------------------PTSPSY 495 SP ++PTSP Y PTSP+Y+ TSPSY Sbjct: 1345 SPGYGFAPTSPGYVPTSPAYNATSPALGAMSPWVGAAGATSPAYSPTSPRIFAGATSPSY 1404 Query: 494 SPSSPTYSPSSPY-------------NSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360 SP+SP+YSPSSP S SP+YSP+SP +SP S YSP+ P YSP+S Sbjct: 1405 SPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYSPTS 1463 [113][TOP] >UniRef100_Q5CUJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cryptosporidium parvum Iowa II RepID=Q5CUJ2_CRYPV Length = 1902 Score = 114 bits (286), Expect = 4e-24 Identities = 55/94 (58%), Positives = 72/94 (76%), Gaps = 5/94 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP YSPTSP YSPTSP YSPSSP YSP+SP S TSP+Y+P+SP +SP+ Sbjct: 1766 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPT 1825 Query: 401 TGYSPSQPGYSPSSTSQYTPKT----NDNKDDPG 312 + YSP+ P Y+P+S + Y+P + ++N PG Sbjct: 1826 SHYSPTSPNYNPTSPN-YSPSSPNYISNNSGSPG 1858 Score = 112 bits (279), Expect = 3e-23 Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 3/91 (3%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP Sbjct: 1731 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1790 Query: 404 STGYSPSQPGYSPSSTSQYTPKT-NDNKDDP 315 S YSPS P YSP+S QY+P + N N P Sbjct: 1791 SPHYSPSSPHYSPTS-PQYSPTSPNYNPASP 1820 Score = 108 bits (271), Expect = 2e-22 Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP Sbjct: 1717 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1776 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP+S Y+P + Sbjct: 1777 SPHYSPTSPHYSPTS-PHYSPSS 1798 Score = 108 bits (270), Expect = 3e-22 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP Sbjct: 1689 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1748 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S Y+P Sbjct: 1749 SPHYSPTSPHYSPTS-PHYSP 1768 Score = 108 bits (270), Expect = 3e-22 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP Sbjct: 1696 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1755 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S Y+P Sbjct: 1756 SPHYSPTSPHYSPTS-PHYSP 1775 Score = 108 bits (270), Expect = 3e-22 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP Sbjct: 1703 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1762 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S Y+P Sbjct: 1763 SPHYSPTSPHYSPTS-PHYSP 1782 Score = 108 bits (270), Expect = 3e-22 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP Sbjct: 1710 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1769 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S Y+P Sbjct: 1770 SPHYSPTSPHYSPTS-PHYSP 1789 Score = 107 bits (267), Expect = 7e-22 Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S Sbjct: 1683 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1742 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S Y+P Sbjct: 1743 PHYSPTSPHYSPTS-PHYSP 1761 Score = 102 bits (253), Expect = 3e-20 Identities = 54/93 (58%), Positives = 63/93 (67%), Gaps = 14/93 (15%) Frame = -2 Query: 578 FSPSSPY-------------SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438 +SPSSP SPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP Sbjct: 1663 YSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1722 Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 YSP+SP +SP S YSP+ P YSP+S Y+P Sbjct: 1723 HYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1754 Score = 100 bits (249), Expect = 8e-20 Identities = 57/98 (58%), Positives = 69/98 (70%), Gaps = 10/98 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTSP YSPTSP YSPTSP YS P+SP YSP+SP+ S +SP YSP+ Sbjct: 1745 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPT 1804 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT-NDNKDDP 315 SPQ+SP S Y+P+ P YSP TS Y+P + N N P Sbjct: 1805 SPQYSPTSPNYNPASPNYSP--TSHYSPTSPNYNPTSP 1840 Score = 97.8 bits (242), Expect = 5e-19 Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP------YNSGTSPDYSPSS 420 +SP+SP YSPTSP YSP+SP YSPTSP YSP+SP Y+P+SP + S TSP+Y+P+S Sbjct: 1780 YSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTS 1839 Query: 419 PQFSPST----GYSPSQPGYSPSSTSQYTP 342 P +SPS+ + PGYSPSS QY P Sbjct: 1840 PNYSPSSPNYISNNSGSPGYSPSS-PQYDP 1868 Score = 87.8 bits (216), Expect = 6e-16 Identities = 50/101 (49%), Positives = 62/101 (61%), Gaps = 20/101 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY-------------SPTSPSYSPSSPTYSPSSP---YNS 450 +SPSSP YSPTSP YSPTSP+Y SPTSP+Y+P+SP YSPSSP N+ Sbjct: 1794 YSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPNYSPSSPNYISNN 1853 Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSS--TSQYTPKT 336 SP YSPSSPQ+ P + P P YS ++Y+P + Sbjct: 1854 SGSPGYSPSSPQYDPIAVASVPRSPSYSVGKMVDAEYSPSS 1894 Score = 73.2 bits (178), Expect = 1e-11 Identities = 51/119 (42%), Positives = 60/119 (50%), Gaps = 39/119 (32%) Frame = -2 Query: 581 RFSPSSPYSPTSPS-------YSPTSPS-----YSPTSPSYSPSSPT------------- 477 + +P SP SP SP YSP SPS Y+PTSP Y+ SSPT Sbjct: 1595 QMTPRSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKY 1654 Query: 476 --------YSPSSPYN-----SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 YSPSSP N S SPD SP+SP +SP S YSP+ P YSP+S Y+P Sbjct: 1655 KVNNTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1712 Score = 65.5 bits (158), Expect = 3e-09 Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 20/74 (27%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSP---------------YN 453 +SP+S YSPTSP+Y+PTSP+YSP+SP+Y + SP YSPSSP Y+ Sbjct: 1822 YSPTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVASVPRSPSYS 1881 Query: 452 SGTSPD--YSPSSP 417 G D YSPSSP Sbjct: 1882 VGKMVDAEYSPSSP 1895 [114][TOP] >UniRef100_Q5CH45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis RepID=Q5CH45_CRYHO Length = 1895 Score = 114 bits (286), Expect = 4e-24 Identities = 55/94 (58%), Positives = 72/94 (76%), Gaps = 5/94 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP YSPTSP YSPTSP YSPSSP YSP+SP S TSP+Y+P+SP +SP+ Sbjct: 1759 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPT 1818 Query: 401 TGYSPSQPGYSPSSTSQYTPKT----NDNKDDPG 312 + YSP+ P Y+P+S + Y+P + ++N PG Sbjct: 1819 SHYSPTSPNYNPTSPN-YSPSSPNYISNNSGSPG 1851 Score = 112 bits (279), Expect = 3e-23 Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 3/91 (3%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP Sbjct: 1724 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1783 Query: 404 STGYSPSQPGYSPSSTSQYTPKT-NDNKDDP 315 S YSPS P YSP+S QY+P + N N P Sbjct: 1784 SPHYSPSSPHYSPTS-PQYSPTSPNYNPASP 1813 Score = 108 bits (271), Expect = 2e-22 Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP Sbjct: 1710 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1769 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP+S Y+P + Sbjct: 1770 SPHYSPTSPHYSPTS-PHYSPSS 1791 Score = 108 bits (270), Expect = 3e-22 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP Sbjct: 1682 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1741 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S Y+P Sbjct: 1742 SPHYSPTSPHYSPTS-PHYSP 1761 Score = 108 bits (270), Expect = 3e-22 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP Sbjct: 1689 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1748 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S Y+P Sbjct: 1749 SPHYSPTSPHYSPTS-PHYSP 1768 Score = 108 bits (270), Expect = 3e-22 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP Sbjct: 1696 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1755 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S Y+P Sbjct: 1756 SPHYSPTSPHYSPTS-PHYSP 1775 Score = 108 bits (270), Expect = 3e-22 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP Sbjct: 1703 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1762 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S Y+P Sbjct: 1763 SPHYSPTSPHYSPTS-PHYSP 1782 Score = 107 bits (267), Expect = 7e-22 Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP S Sbjct: 1676 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1735 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S Y+P Sbjct: 1736 PHYSPTSPHYSPTS-PHYSP 1754 Score = 102 bits (253), Expect = 3e-20 Identities = 54/93 (58%), Positives = 63/93 (67%), Gaps = 14/93 (15%) Frame = -2 Query: 578 FSPSSPY-------------SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438 +SPSSP SPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP Sbjct: 1656 YSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1715 Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 YSP+SP +SP S YSP+ P YSP+S Y+P Sbjct: 1716 HYSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1747 Score = 100 bits (249), Expect = 8e-20 Identities = 57/98 (58%), Positives = 69/98 (70%), Gaps = 10/98 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTSP YSPTSP YSPTSP YS P+SP YSP+SP+ S +SP YSP+ Sbjct: 1738 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPT 1797 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT-NDNKDDP 315 SPQ+SP S Y+P+ P YSP TS Y+P + N N P Sbjct: 1798 SPQYSPTSPNYNPASPNYSP--TSHYSPTSPNYNPTSP 1833 Score = 97.8 bits (242), Expect = 5e-19 Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP------YNSGTSPDYSPSS 420 +SP+SP YSPTSP YSP+SP YSPTSP YSP+SP Y+P+SP + S TSP+Y+P+S Sbjct: 1773 YSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTS 1832 Query: 419 PQFSPST----GYSPSQPGYSPSSTSQYTP 342 P +SPS+ + PGYSPSS QY P Sbjct: 1833 PNYSPSSPNYISNNSGSPGYSPSS-PQYDP 1861 Score = 87.8 bits (216), Expect = 6e-16 Identities = 51/101 (50%), Positives = 62/101 (61%), Gaps = 20/101 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY-------------SPTSPSYSPSSPTYSPSSP---YNS 450 +SPSSP YSPTSP YSPTSP+Y SPTSP+Y+P+SP YSPSSP N+ Sbjct: 1787 YSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPNYSPSSPNYISNN 1846 Query: 449 GTSPDYSPSSPQFSPSTGYS-PSQPGYSPSS--TSQYTPKT 336 SP YSPSSPQ+ P S P P YS ++Y+P + Sbjct: 1847 SGSPGYSPSSPQYDPIAVTSVPRSPSYSVGKMVDAEYSPSS 1887 Score = 73.2 bits (178), Expect = 1e-11 Identities = 51/119 (42%), Positives = 60/119 (50%), Gaps = 39/119 (32%) Frame = -2 Query: 581 RFSPSSPYSPTSPS-------YSPTSPS-----YSPTSPSYSPSSPT------------- 477 + +P SP SP SP YSP SPS Y+PTSP Y+ SSPT Sbjct: 1588 QMTPRSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKY 1647 Query: 476 --------YSPSSPYN-----SGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 YSPSSP N S SPD SP+SP +SP S YSP+ P YSP+S Y+P Sbjct: 1648 KVNNTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTS-PHYSP 1705 Score = 65.5 bits (158), Expect = 3e-09 Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 20/74 (27%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSP---------------YN 453 +SP+S YSPTSP+Y+PTSP+YSP+SP+Y + SP YSPSSP Y+ Sbjct: 1815 YSPTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVTSVPRSPSYS 1874 Query: 452 SGTSPD--YSPSSP 417 G D YSPSSP Sbjct: 1875 VGKMVDAEYSPSSP 1888 [115][TOP] >UniRef100_C5LSN8 P35 antigen, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LSN8_9ALVE Length = 170 Score = 114 bits (286), Expect = 4e-24 Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 9/97 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 57 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPT 116 Query: 404 -------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S + Y P + + P Sbjct: 117 SPAYSPTSPAYSPTSPAYSPTSPAYYHPLVTSSDEGP 153 Score = 111 bits (278), Expect = 4e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 50 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPT 109 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 110 SPAYSPTSPAYSPTSPA-YSP 129 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 60 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 61 SPAYSPTSPAYSPTSPA-YSP 80 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 22 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 81 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 82 SPAYSPTSPAYSPTSPA-YSP 101 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 43 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 102 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 103 SPSYSPTSPAYSPTSPA-YSP 122 Score = 101 bits (252), Expect = 4e-20 Identities = 52/93 (55%), Positives = 64/93 (68%), Gaps = 18/93 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP+ Sbjct: 78 YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 137 Query: 401 T-----------------GYSPSQPGYSPSSTS 354 + YSP+ P YS +S S Sbjct: 138 SPAYYHPLVTSSDEGPVVRYSPTSPAYSNTSPS 170 [116][TOP] >UniRef100_B6AG69 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66 RepID=B6AG69_9CRYT Length = 1927 Score = 114 bits (286), Expect = 4e-24 Identities = 56/90 (62%), Positives = 67/90 (74%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP+YSPTSP YSP+SP YSP+SP+ S TSP+YSP+SP +SP Sbjct: 1734 YSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPT 1793 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSPS P YSP+S S N + P Sbjct: 1794 SPNYSPSSPHYSPTSPSYNPASPNYSPSSP 1823 Score = 113 bits (283), Expect = 9e-24 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP+YSPTSP YSP+SP YSP+SP+ S TSP+YSPSSP +SP Sbjct: 1748 YSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPT 1807 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S Y+P+ P YSPSS N + P Sbjct: 1808 SPSYNPASPNYSPSSPHYNPASPNYSPSSP 1837 Score = 113 bits (283), Expect = 9e-24 Identities = 55/81 (67%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP YSPTSP+YSPTSP YSP+SP YSPSSP+ S TSP Y+P+SP +SPS Sbjct: 1762 YSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPS 1821 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 + Y+P+ P YSPSS QY P Sbjct: 1822 SPHYNPASPNYSPSS-PQYNP 1841 Score = 112 bits (279), Expect = 3e-23 Identities = 56/96 (58%), Positives = 73/96 (76%), Gaps = 8/96 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP+YSP+SP YSPTSPSY+P+SP YSPSSP+ + SP+YSPSSPQ++P+ Sbjct: 1783 YSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPSSPHYNPASPNYSPSSPQYNPA 1842 Query: 401 -TGYSPSQPGYSPSSTSQYTPK------TNDNKDDP 315 YSPS P Y+P+S + Y+P +N N D P Sbjct: 1843 LPNYSPSSPQYNPTSPN-YSPSSPNYVLSNGNIDSP 1877 Score = 111 bits (278), Expect = 4e-23 Identities = 54/83 (65%), Positives = 67/83 (80%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP+YSP+SP +SP Sbjct: 1720 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPT 1779 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP+S + Y+P + Sbjct: 1780 SPNYSPTSPHYSPTSPN-YSPSS 1801 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S TSP+YSP+SP +SP Sbjct: 1706 YSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPT 1765 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1766 SPNYSPTSPHYSPTSPN-YSP 1785 Score = 110 bits (276), Expect = 6e-23 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP YSP+SP YSP+SP+ S TSP YSP+SP +SP Sbjct: 1699 YSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPT 1758 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S Y+P Sbjct: 1759 SPHYSPTSPNYSPTS-PHYSP 1778 Score = 109 bits (273), Expect = 1e-22 Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1727 YSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPT 1786 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPSS Y+P Sbjct: 1787 SPHYSPTSPNYSPSS-PHYSP 1806 Score = 108 bits (269), Expect = 4e-22 Identities = 53/79 (67%), Positives = 65/79 (82%), Gaps = 2/79 (2%) Frame = -2 Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 P SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP+ S TSP YSP+SP +SP S Sbjct: 1694 PLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1753 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S + Y+P Sbjct: 1754 NYSPTSPHYSPTSPN-YSP 1771 Score = 107 bits (268), Expect = 5e-22 Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1713 YSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPT 1772 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S Y+P Sbjct: 1773 SPHYSPTSPNYSPTS-PHYSP 1792 Score = 97.4 bits (241), Expect = 7e-19 Identities = 49/78 (62%), Positives = 60/78 (76%), Gaps = 2/78 (2%) Frame = -2 Query: 569 SSPY-SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396 SSP+ SPTSP P SP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S Sbjct: 1681 SSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPH 1740 Query: 395 YSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S + Y+P Sbjct: 1741 YSPTSPHYSPTSPN-YSP 1757 Score = 84.3 bits (207), Expect = 6e-15 Identities = 46/83 (55%), Positives = 55/83 (66%), Gaps = 7/83 (8%) Frame = -2 Query: 569 SSPYSPTSPSYS------PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +S YSPTSP YS +SP SPTSP P SP YSP+SP S TSP+YSP+SP +S Sbjct: 1662 TSAYSPTSPVYSGDKDGDSSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYS 1721 Query: 407 P-STGYSPSQPGYSPSSTSQYTP 342 P S YSP+ P YSP+S Y+P Sbjct: 1722 PTSPHYSPTSPHYSPTS-PHYSP 1743 Score = 76.3 bits (186), Expect = 2e-12 Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 13/94 (13%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTY------------SPSSPYNSGTSP 438 +SPSSP Y+P P+YSP+SP Y+PTSP+YSPSSP Y SPSSP+ + Sbjct: 1832 YSPSSPQYNPALPNYSPSSPQYNPTSPNYSPSSPNYVLSNGNIDSPQYSPSSPHYDQSVA 1891 Query: 437 DYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKT 336 Y P+SP ++ ST + + YSP+S T K+ Sbjct: 1892 AYHPTSPSYT-STNMAAEEAEYSPTSPLGGTTKS 1924 Score = 65.5 bits (158), Expect = 3e-09 Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 37/114 (32%) Frame = -2 Query: 572 PSSPYSPTSP--SYSPTSPSYSPTSPSYSP--------------SSPTYSPSSPYNSG-- 447 P SP SPTSP Y+PTSP Y+ SP+Y ++ YSP+SP SG Sbjct: 1617 PYSPASPTSPLIDYTPTSPIYAVRSPAYGHETEERTKKRYKANIATSAYSPTSPVYSGDK 1676 Query: 446 ------------------TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP+YSP+SP +SP S YSP+ P YSP+S Y+P Sbjct: 1677 DGDSSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTS-PHYSP 1729 [117][TOP] >UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299 RepID=C1EA31_9CHLO Length = 1720 Score = 113 bits (283), Expect = 9e-24 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1611 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPT 1670 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1671 SPQYSPTSPQYSPTS-PQYSP 1690 Score = 112 bits (281), Expect = 2e-23 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1590 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1649 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S QY+P Sbjct: 1650 SPAYSPTSPAYSPTS-PQYSP 1669 Score = 112 bits (281), Expect = 2e-23 Identities = 58/102 (56%), Positives = 72/102 (70%), Gaps = 16/102 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 1618 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPT 1677 Query: 404 STGYSPSQPGYSPSS--------------TSQYTPKTNDNKD 321 S YSP+ P YSP+S + QY+P T + D Sbjct: 1678 SPQYSPTSPQYSPTSLGLSDADAPTRSPTSPQYSPSTEADGD 1719 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1527 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1586 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1587 SPAYSPTSPAYSPTSPA-YSP 1606 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1548 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1607 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1608 SPAYSPTSPAYSPTSPA-YSP 1627 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1569 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1628 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1629 SPAYSPTSPAYSPTSPA-YSP 1648 Score = 106 bits (264), Expect = 1e-21 Identities = 51/77 (66%), Positives = 62/77 (80%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S Y Sbjct: 1524 SPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1583 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S + Y+P Sbjct: 1584 SPTSPAYSPTSPA-YSP 1599 [118][TOP] >UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK89_PHYPA Length = 1646 Score = 113 bits (283), Expect = 9e-24 Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSPSYSPTSP YSP+SP YSP+SP S TSP Y+P+SP +SP Sbjct: 1549 YSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPT 1608 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP+ P YSP+S S Y+P + K P Sbjct: 1609 SPSYSPTSPSYSPTSPS-YSPTSPAYKHKP 1637 Score = 111 bits (278), Expect = 4e-23 Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S TSP YSP+SP ++P Sbjct: 1542 YSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPT 1601 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 1602 SPSYSPTSPSYSPTSPS-YSP 1621 Score = 109 bits (273), Expect = 1e-22 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP SP YSPTSP YSPTSP YSPTSP YSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 1535 YSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPT 1594 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S S Y+P Sbjct: 1595 SPSYAPTSPSYSPTSPS-YSP 1614 Score = 108 bits (270), Expect = 3e-22 Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSP---SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 +FSP S P+SP+SP YSP+SP YSP SP YSP+SP YSP+SP S TSP YSP+SP + Sbjct: 1511 QFSPYVGSMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSY 1570 Query: 410 SP-STGYSPSQPGYSPSSTSQYTP 342 SP S GYSP+ PGYSP+S S Y+P Sbjct: 1571 SPTSPGYSPTSPGYSPTSPS-YSP 1593 Score = 108 bits (269), Expect = 4e-22 Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSP SP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1528 YSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPT 1587 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y+P+S S Y+P Sbjct: 1588 SPSYSPTSPSYAPTSPS-YSP 1607 Score = 105 bits (262), Expect = 3e-21 Identities = 50/76 (65%), Positives = 59/76 (77%), Gaps = 2/76 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSPSYSP+SP+Y+P+SP S TSP YSP+SP +SP Sbjct: 1563 YSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPT 1622 Query: 404 STGYSPSQPGYSPSST 357 S YSP+ P Y T Sbjct: 1623 SPSYSPTSPAYKHKPT 1638 Score = 80.5 bits (197), Expect = 9e-14 Identities = 47/82 (57%), Positives = 56/82 (68%), Gaps = 4/82 (4%) Frame = -2 Query: 575 SPSSPYSPTSPS-YSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 SPS SP S + +SP S +SP+SP YSPSSP YSP SP S TSP YSP+SP +SP Sbjct: 1499 SPSLRASPLSEAQFSPYVGSMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSP 1558 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S GYSP+ P YSP+S Y+P Sbjct: 1559 TSPGYSPTSPSYSPTSPG-YSP 1579 Score = 64.3 bits (155), Expect = 7e-09 Identities = 39/90 (43%), Positives = 49/90 (54%), Gaps = 2/90 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPT--SPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 SPS SP+ + + +SP S +SPSSP YSPSSP S SP YSP+SP Sbjct: 1493 SPSYLLSPSLRASPLSEAQFSPYVGSMPFSPSSPGYSPSSPGYSPLSPGYSPTSP----- 1547 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 GYSP+ PGYSP+S + + PG Sbjct: 1548 -GYSPTSPGYSPTSPGYSPTSPSYSPTSPG 1576 [119][TOP] >UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii RepID=A8IRZ2_CHLRE Length = 1789 Score = 113 bits (282), Expect = 1e-23 Identities = 55/82 (67%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R+SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1563 RYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1622 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1623 TSPAYSPTSPAYSPTSPA-YSP 1643 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1557 YSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1616 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1617 SPAYSPTSPAYSPTSPA-YSP 1636 Score = 111 bits (277), Expect = 5e-23 Identities = 54/84 (64%), Positives = 68/84 (80%), Gaps = 5/84 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1585 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1644 Query: 404 STGYSPSQPGYSPS---STSQYTP 342 S YSP+ P YSP+ ++ QY+P Sbjct: 1645 SPAYSPTSPAYSPAYSPTSPQYSP 1668 Score = 110 bits (275), Expect = 8e-23 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1550 YSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1609 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1610 SPAYSPTSPAYSPTSPA-YSP 1629 Score = 109 bits (272), Expect = 2e-22 Identities = 52/76 (68%), Positives = 64/76 (84%), Gaps = 1/76 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP+ Sbjct: 1599 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPA 1658 Query: 401 TGYSPSQPGYSPSSTS 354 YSP+ P YSP+S S Sbjct: 1659 --YSPTSPQYSPTSPS 1672 Score = 106 bits (265), Expect = 1e-21 Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 2/79 (2%) Frame = -2 Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 P SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S Sbjct: 1545 PMSPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1604 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S + Y+P Sbjct: 1605 AYSPTSPAYSPTSPA-YSP 1622 Score = 104 bits (259), Expect = 6e-21 Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 2/87 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+ S TSP YSP+SP SP Sbjct: 1620 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPA---YSPTSPQYSPTSPSMSPT 1676 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNK 324 S YSP+ P YSP+S + Y+P T + Sbjct: 1677 SPRYSPTSPNYSPTSPN-YSPSTRQRR 1702 Score = 85.5 bits (210), Expect = 3e-15 Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 5/84 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSP----TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 +SP+SP YSPTSP+YSP TSP YSPTSPS SP+SP YSP+SP S TSP+YSPS+ Q Sbjct: 1641 YSPTSPAYSPTSPAYSPAYSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPTSPNYSPSTRQ 1700 Query: 413 FSPSTGYSPSQPGYSPSSTSQYTP 342 ST P+ G ++ Q P Sbjct: 1701 RRRSTRPRPTSLGRRRAARVQAAP 1724 Score = 76.3 bits (186), Expect = 2e-12 Identities = 47/124 (37%), Positives = 61/124 (49%), Gaps = 53/124 (42%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSP----TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 +SP+SP YSPTSP+YSPTSP+YSP TSP YSP+SP+ SP+SP S TSP+YSP+SP Sbjct: 1634 YSPTSPAYSPTSPAYSPTSPAYSPAYSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPTSPN 1693 Query: 413 FSPST------------------------------------------------GYSPSQP 378 +SPST + P++P Sbjct: 1694 YSPSTRQRRRSTRPRPTSLGRRRAARVQAAPTPAPPTAPPRMSAPSTHLAPPSAHPPTRP 1753 Query: 377 GYSP 366 +P Sbjct: 1754 RRAP 1757 Score = 73.2 bits (178), Expect = 1e-11 Identities = 41/79 (51%), Positives = 52/79 (65%), Gaps = 4/79 (5%) Frame = -2 Query: 566 SPYSPTSP-SYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-ST 399 S +SP P ++SP P SP YSP+SP YSP+SP S TSP YSP+SP +SP S Sbjct: 1524 SGFSPMHPGAFSPAHGGGVGGPMSPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSP 1583 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S + Y+P Sbjct: 1584 AYSPTSPAYSPTSPA-YSP 1601 [120][TOP] >UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae RepID=Q7Q3C6_ANOGA Length = 1878 Score = 113 bits (282), Expect = 1e-23 Identities = 57/86 (66%), Positives = 68/86 (79%), Gaps = 7/86 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SPSSP YSPTSPSYSPTSPSYSPTSP+++P +P+YSPSSP S TSP YSP+SP +SPS Sbjct: 1679 YSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPS 1738 Query: 401 T-GYSPSQPGYSPSSTS-----QYTP 342 + YSP+ P YSP+S S YTP Sbjct: 1739 SPKYSPTSPSYSPTSPSYIGSPHYTP 1764 Score = 112 bits (281), Expect = 2e-23 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SP +SPTSPSYSPSSP+YSP+SP S TSP YSP+SP F+P Sbjct: 1651 YSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPV 1710 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 T YSPS P YSP+S Y+P Sbjct: 1711 TPSYSPSSPNYSPTS-PHYSP 1730 Score = 111 bits (277), Expect = 5e-23 Identities = 55/81 (67%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP +SPTSPSYSP+SPSYSPTSPSYSP+SP+YSP+SP + +P YSPSSP +SP Sbjct: 1665 YSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPT 1724 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSPSS +Y+P Sbjct: 1725 SPHYSPASPSYSPSS-PKYSP 1744 Score = 106 bits (264), Expect = 1e-21 Identities = 51/83 (61%), Positives = 69/83 (83%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSP+SP +SPTSPSYSP+SPSYSP+SP+YSP+SP S TSP+++P +P +SPS Sbjct: 1658 YSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPS 1717 Query: 401 T-GYSPSQPGYSPSSTSQYTPKT 336 + YSP+ P YSP+S S Y+P + Sbjct: 1718 SPNYSPTSPHYSPASPS-YSPSS 1739 Score = 101 bits (251), Expect = 5e-20 Identities = 51/88 (57%), Positives = 62/88 (70%), Gaps = 7/88 (7%) Frame = -2 Query: 578 FSPSSPYSPTS------PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SP SP PTS P YSPTSPSYSPTSPSYSPSSP +SP+SP S +SP YSP+SP Sbjct: 1632 YSPMSPMHPTSASNFASPGYSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSP 1691 Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTPKT 336 +SP S YSP+ P ++P T Y+P + Sbjct: 1692 SYSPTSPSYSPTSPNFTP-VTPSYSPSS 1718 Score = 101 bits (251), Expect = 5e-20 Identities = 53/99 (53%), Positives = 69/99 (69%), Gaps = 15/99 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411 +SP+SP ++P +PSYSP+SP+YSPTSP YSP+SP+YSPSSP S TSP YSP+SP + Sbjct: 1700 YSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSPKYSPTSPSYSPTSPSYIGS 1759 Query: 410 ------SPSTG-----YSPSQPGYSPSSTSQYTPKTNDN 327 SP G YSP+ P YSPSS Q++P ++ N Sbjct: 1760 PHYTPASPQYGQASPNYSPTSPSYSPSS-PQHSPGSSSN 1797 Score = 94.7 bits (234), Expect = 5e-18 Identities = 47/79 (59%), Positives = 59/79 (74%), Gaps = 2/79 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP SPSYSP+SP YSPTSPSYSP+SP+Y SP+ + SP Y +SP +SP Sbjct: 1721 YSPTSPHYSPASPSYSPSSPKYSPTSPSYSPTSPSYI-GSPHYTPASPQYGQASPNYSPT 1779 Query: 404 STGYSPSQPGYSPSSTSQY 348 S YSPS P +SP S+S + Sbjct: 1780 SPSYSPSSPQHSPGSSSNH 1798 Score = 92.8 bits (229), Expect = 2e-17 Identities = 53/103 (51%), Positives = 63/103 (61%), Gaps = 24/103 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSY------SPSSPTYSPSSPYNSGTSPDYSPSS 420 +SP+SP YSP+SP YSPTSPSYSPTSPSY +P+SP Y +SP S TSP YSPSS Sbjct: 1728 YSPASPSYSPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSS 1787 Query: 419 PQFSPSTG-----------------YSPSQPGYSPSSTSQYTP 342 PQ SP + YSP+ YSPSS +Y+P Sbjct: 1788 PQHSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYSPSS-PKYSP 1829 Score = 92.0 bits (227), Expect = 3e-17 Identities = 51/100 (51%), Positives = 61/100 (61%), Gaps = 19/100 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSP-----SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SPSSP Y+P SP SYSPTSP YSP SP YSP S YSPSSP + +YSP+SP Sbjct: 1571 YSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPNIHSATQNYSPTSP 1630 Query: 416 QFSP-------------STGYSPSQPGYSPSSTSQYTPKT 336 +SP S GYSP+ P YSP+S S Y+P + Sbjct: 1631 SYSPMSPMHPTSASNFASPGYSPTSPSYSPTSPS-YSPSS 1669 Score = 87.0 bits (214), Expect = 9e-16 Identities = 53/122 (43%), Positives = 67/122 (54%), Gaps = 35/122 (28%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSP------------------------------SYS 492 ++P+SP Y SP+YSPTSPSYSP+SP SYS Sbjct: 1762 YTPASPQYGQASPNYSPTSPSYSPSSPQHSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYS 1821 Query: 491 PSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSPSQPG---YSPSSTSQYTPKTNDNK 324 PSSP YSP+SP + +SP YSPSSP +SP+ GYSPS P YSP+S P +D+ Sbjct: 1822 PSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPSSPASPTYSPTS-----PSYDDSN 1876 Query: 323 DD 318 +D Sbjct: 1877 ED 1878 Score = 84.3 bits (207), Expect = 6e-15 Identities = 47/88 (53%), Positives = 56/88 (63%), Gaps = 7/88 (7%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP P SP+ SPSYSP+SP+Y+P SP SYSP+SP YSP SP S S +YSPSSP Sbjct: 1558 SPYPPSSPSMSPSYSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPN 1617 Query: 413 FSPST-GYSPSQPGYSPSSTSQYTPKTN 333 +T YSP+ P YSP S T +N Sbjct: 1618 IHSATQNYSPTSPSYSPMSPMHPTSASN 1645 Score = 80.1 bits (196), Expect = 1e-13 Identities = 46/90 (51%), Positives = 54/90 (60%), Gaps = 1/90 (1%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-P 405 R SPSSP PS SP PS SPSYSPSSP Y+P+SP G SP YSP+SP +S P Sbjct: 1547 RGSPSSP----GPSMSPYPPSSPSMSPSYSPSSPNYAPNSP--GGASPSYSPTSPGYSPP 1600 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S YSP YSPSS + ++ N + P Sbjct: 1601 SPQYSPGSSNYSPSSPNIHSATQNYSPTSP 1630 Score = 65.9 bits (159), Expect = 2e-09 Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 18/101 (17%) Frame = -2 Query: 578 FSPSSPYS---PTSPSYSPTSPS---------YSPTSPSYSPSSPTYSPSSPYNSGTSPD 435 +SPS P S P PS+SP++ S +SP S S P+ SP P + SP Sbjct: 1511 WSPSGPASGMTPGGPSFSPSAQSDASGMSPSSWSPIRGSPSSPGPSMSPYPPSSPSMSPS 1570 Query: 434 YSPSSPQFSP------STGYSPSQPGYSPSSTSQYTPKTND 330 YSPSSP ++P S YSP+ PGYSP S QY+P +++ Sbjct: 1571 YSPSSPNYAPNSPGGASPSYSPTSPGYSPPS-PQYSPGSSN 1610 [121][TOP] >UniRef100_Q4QZ03 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum tuberosum RepID=Q4QZ03_SOLTU Length = 361 Score = 112 bits (280), Expect = 2e-23 Identities = 57/81 (70%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S TSP YSP+SP +SP Sbjct: 130 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 189 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ YSP+S S Y+P Sbjct: 190 SPSYSPTSSSYSPTSPS-YSP 209 Score = 111 bits (278), Expect = 4e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP+YSPTSP+YSPT PSYSP+ P+YSP+SP S TSP YSP+SP +SP+ Sbjct: 214 YSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPT 273 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 YSP+ PGYSP+S S Y+P Sbjct: 274 FPAYSPTSPGYSPTSPS-YSP 293 Score = 110 bits (275), Expect = 8e-23 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSPTSP+YSPTSPSYSPTSPSYSP+S +YSP+SP S TSP YSP+SP +SP Sbjct: 165 YSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPT 224 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+ S Y+P Sbjct: 225 SPAYSPTSPAYSPTLPS-YSP 244 Score = 110 bits (275), Expect = 8e-23 Identities = 56/81 (69%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSPSYSPTSPSYSPTS SYSP+SP+YSP+SP S TSP YSP+SP +SP Sbjct: 172 YSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPT 231 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+ S Y+P Sbjct: 232 SPAYSPTLPSYSPTLPS-YSP 251 Score = 108 bits (270), Expect = 3e-22 Identities = 56/92 (60%), Positives = 67/92 (72%), Gaps = 13/92 (14%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS------- 423 +SP+SP YSPTSPSYSPT P+YSPTSP YSP+SP+YSP+SP S TSP Y+PS Sbjct: 256 YSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSL 315 Query: 422 -----SPQFSPSTGYSPSQPGYSPSSTSQYTP 342 SP+ SPS+ YSPS P YSP+S S Y+P Sbjct: 316 AYSPTSPKLSPSSPYSPSSPSYSPTSPS-YSP 346 Score = 108 bits (269), Expect = 4e-22 Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 6/87 (6%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSPTSPSYSPT P+YSP+SP YSP+SP S TSP YSP+SP ++PS Sbjct: 249 YSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPS 308 Query: 401 TGYSPSQPGYSPSS-----TSQYTPKT 336 YSPS YSP+S +S Y+P + Sbjct: 309 ARYSPSL-AYSPTSPKLSPSSPYSPSS 334 Score = 107 bits (268), Expect = 5e-22 Identities = 53/81 (65%), Positives = 66/81 (81%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP+SP YSPTSP+YSPTSPSYSP+SP+YSP+S S TSP YSP+SP +SP Sbjct: 158 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPT 217 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 218 SPAYSPTSPAYSPTSPA-YSP 237 Score = 107 bits (268), Expect = 5e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+ P YSPT PSYSPTSPSYSPTSPSYSP+SP+YSP+ P S TSP YSP+SP +SP Sbjct: 235 YSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPT 294 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P Y+PS ++Y+P Sbjct: 295 SPSYSPTSPSYNPS--ARYSP 313 Score = 107 bits (266), Expect = 9e-22 Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSP-SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP SS YSPTSPSYSPTSP YSPTSP+YSP+SP YSP+SP S T P YSP+ P +SP Sbjct: 193 YSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPT 252 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 253 SPSYSPTSPSYSPTSPS-YSP 272 Score = 106 bits (265), Expect = 1e-21 Identities = 51/81 (62%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP+SP S TS YSP+SP +SP+ Sbjct: 151 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPT 210 Query: 401 TG-YSPSQPGYSPSSTSQYTP 342 + YSP+ P YSP+S + Y+P Sbjct: 211 SPIYSPTSPAYSPTSPA-YSP 230 Score = 106 bits (264), Expect = 1e-21 Identities = 54/85 (63%), Positives = 65/85 (76%), Gaps = 3/85 (3%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 FSP+S YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S TSP YSPSSP +SP Sbjct: 115 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 174 Query: 404 -STGYSPSQPGYSPSSTSQYTPKTN 333 S YSP+ P YSP+S S Y+P ++ Sbjct: 175 TSPAYSPTSPSYSPTSPS-YSPTSS 198 Score = 101 bits (252), Expect = 4e-20 Identities = 56/86 (65%), Positives = 62/86 (72%), Gaps = 14/86 (16%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPS------------SPTYSPSSPYNSGTSP 438 +SP+SP YSPTSPSYSPTSPSYSPTSPSY+PS SP SPSSPY S +SP Sbjct: 277 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPY-SPSSP 335 Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPS 363 YSP+SP +SP S YSPS P YSPS Sbjct: 336 SYSPTSPSYSPTSPSYSPSSPTYSPS 361 Score = 96.3 bits (238), Expect = 2e-18 Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSP-------TYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTSP+YSPT PSYSPT PSYSP+SP +YSP+SP S T P YSP+ Sbjct: 221 YSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPT 280 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S YSP+ P YSP+S S Y P Sbjct: 281 SPGYSPTSPSYSPTSPSYSPTSPS-YNP 307 Score = 87.0 bits (214), Expect = 9e-16 Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 2/69 (2%) Frame = -2 Query: 542 SYSPTS-PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369 ++SPTS P YSP+SP YSPSSP YSP+SP S TSP YSP+SP +SP S YSPS PGYS Sbjct: 114 AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 173 Query: 368 PSSTSQYTP 342 P+S + Y+P Sbjct: 174 PTSPA-YSP 181 Score = 80.9 bits (198), Expect = 7e-14 Identities = 36/39 (92%), Positives = 38/39 (97%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS 465 + SPSSPYSP+SPSYSPTSPSYSPTSPSYSPSSPTYSPS Sbjct: 323 KLSPSSPYSPSSPSYSPTSPSYSPTSPSYSPSSPTYSPS 361 Score = 72.4 bits (176), Expect = 2e-11 Identities = 38/59 (64%), Positives = 42/59 (71%), Gaps = 6/59 (10%) Frame = -2 Query: 581 RFSPSSPYSPTSPS------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 R+SPS YSPTSP YSP+SPSYSPTSPSYSP+SP+YSPS SP YSPS Sbjct: 310 RYSPSLAYSPTSPKLSPSSPYSPSSPSYSPTSPSYSPTSPSYSPS-------SPTYSPS 361 Score = 60.1 bits (144), Expect = 1e-07 Identities = 42/87 (48%), Positives = 54/87 (62%), Gaps = 7/87 (8%) Frame = -2 Query: 575 SPSSPYSP-TSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQ 414 SP+ SP T +SP ++SPTS SP YSPSSP G +SP YSP+SP Sbjct: 93 SPNMRMSPITDAQFSPYVGGMAFSPTS------SPGYSPSSP---GYSPSSPGYSPTSPG 143 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKT 336 +SP S GYSP+ PGYSP+S + Y+P + Sbjct: 144 YSPTSPGYSPTSPGYSPTSPT-YSPSS 169 [122][TOP] >UniRef100_Q58EF0 Polr2a protein (Fragment) n=2 Tax=Danio rerio RepID=Q58EF0_DANRE Length = 161 Score = 111 bits (277), Expect = 5e-23 Identities = 54/100 (54%), Positives = 74/100 (74%), Gaps = 12/100 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP+YSPT+P YSPTSP+YSP+SPTY+P+SP S TSP YSP+SP++SP Sbjct: 59 KYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSP 118 Query: 404 S-----------TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + Y+P + + D Sbjct: 119 TSPTYSPTSPKGSTYSPTSPGYSPTSPT-YSPAISPDDSD 157 Score = 110 bits (274), Expect = 1e-22 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 52 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSP 111 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 112 TSPKYSPTSPTYSPTSPKGSTYSP 135 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 11 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 70 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 71 SPTYSPTTPKYSPTSPT-YSP 90 Score = 108 bits (270), Expect = 3e-22 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 3 RYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 62 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 63 TSPKYSPTSPTYSP-TTPKYSP 83 Score = 108 bits (270), Expect = 3e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 39 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPT 98 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 99 SPKYSPTSPTYSPTS-PKYSP 118 Score = 103 bits (256), Expect = 1e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 31 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 90 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 91 TSPTYTPTSPKYSPTSPT-YSP 111 Score = 90.5 bits (223), Expect = 8e-17 Identities = 42/69 (60%), Positives = 56/69 (81%), Gaps = 1/69 (1%) Frame = -2 Query: 545 PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369 P Y+P SP+Y+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YS Sbjct: 2 PRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 61 Query: 368 PSSTSQYTP 342 P+S +Y+P Sbjct: 62 PTS-PKYSP 69 Score = 79.7 bits (195), Expect = 2e-13 Identities = 42/80 (52%), Positives = 59/80 (73%), Gaps = 5/80 (6%) Frame = -2 Query: 560 YSPTSPSYSPTSP----SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STG 396 Y+P SP+Y+ SYSP+SPSYSP+SP Y+P+SP S +SP+Y+P+SP++SP S Sbjct: 4 YTPQSPTYT----PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPK 59 Query: 395 YSPSQPGYSPSSTSQYTPKT 336 YSP+ P YSP+S + Y+P T Sbjct: 60 YSPTSPKYSPTSPT-YSPTT 78 [123][TOP] >UniRef100_O96452 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae RepID=O96452_ANTLO Length = 1553 Score = 111 bits (277), Expect = 5e-23 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1439 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1498 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1499 SPAYSPTSPAYSPTSPA-YSP 1518 Score = 107 bits (267), Expect = 7e-22 Identities = 51/78 (65%), Positives = 64/78 (82%), Gaps = 2/78 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1460 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1519 Query: 404 STGYSPSQPGYSPSSTSQ 351 S YSP+ P Y PS+ ++ Sbjct: 1520 SPAYSPTSPVYRPSTRAK 1537 Score = 106 bits (265), Expect = 1e-21 Identities = 51/76 (67%), Positives = 62/76 (81%), Gaps = 1/76 (1%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYS 390 S YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP S YS Sbjct: 1437 SVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYS 1496 Query: 389 PSQPGYSPSSTSQYTP 342 P+ P YSP+S + Y+P Sbjct: 1497 PTSPAYSPTSPA-YSP 1511 Score = 97.4 bits (241), Expect = 7e-19 Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 1/71 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP + PS Sbjct: 1474 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPVYRPS 1533 Query: 401 TGYSPSQPGYS 369 T G++ Sbjct: 1534 TRAKDQDQGFN 1544 Score = 96.7 bits (239), Expect = 1e-18 Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 11/89 (12%) Frame = -2 Query: 575 SPSSPYSP---------TSPS-YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 S S P+SP T+PS YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP Sbjct: 1417 SSSVPFSPIAAHGYAAGTTPSVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1476 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP +SP S YSP+ P YSP+S + Y+P Sbjct: 1477 TSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1504 Score = 71.6 bits (174), Expect = 4e-11 Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 19/91 (20%) Frame = -2 Query: 557 SPTSP-SYSPTSPS-----------------YSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432 SP S Y +S YSPTSP+YSP+SP YSP+SP S TSP Y Sbjct: 1408 SPVSDVRYGSSSVPFSPIAAHGYAAGTTPSVYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1467 Query: 431 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP+SP +SP S YSP+ P YSP+S + Y+P Sbjct: 1468 SPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1497 [124][TOP] >UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis macrandra RepID=Q9C428_9FUNG Length = 1603 Score = 110 bits (276), Expect = 6e-23 Identities = 53/72 (73%), Positives = 61/72 (84%), Gaps = 2/72 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SP+SP YSPTSPSYSPTSPSY+PTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP S Sbjct: 1532 SPTSPGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1591 Query: 401 TGYSPSQPGYSP 366 YSP+ P YSP Sbjct: 1592 PSYSPTSPSYSP 1603 Score = 94.4 bits (233), Expect = 6e-18 Identities = 49/76 (64%), Positives = 58/76 (76%), Gaps = 4/76 (5%) Frame = -2 Query: 557 SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQP 378 SPTSP YSPTSPSYSPTSPSY+P+SP+YSP+SP S TSP YSP+SP +SP+ SPS Sbjct: 1532 SPTSPGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPSYS 1588 Query: 377 ----GYSPSSTSQYTP 342 YSP+S S Y+P Sbjct: 1589 PTSPSYSPTSPS-YSP 1603 [125][TOP] >UniRef100_UPI00006A20E2 DNA-directed RNA polymerase II subunit RPB1 (EC 2.7.7.6) (RNA polymerase II subunit B1) (DNA-directed RNA polymerase II subunit A) (DNA-directed RNA polymerase III largest subunit). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A20E2 Length = 162 Score = 110 bits (275), Expect = 8e-23 Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 4/84 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + TSP YSP+SP +SP Sbjct: 51 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 110 Query: 404 -STGYSPSQPGYSPSST--SQYTP 342 S YSP+ P YSP+S S Y+P Sbjct: 111 TSPKYSPTSPTYSPTSPKGSTYSP 134 Score = 109 bits (272), Expect = 2e-22 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 ++PSSP YSP+SPSYSPTSP Y+PTSPSYSPSSP Y+P+SP S TSP YSP+SP++SP Sbjct: 10 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 69 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 70 SPTYSPTTPKYSPTSPT-YSP 89 Score = 108 bits (270), Expect = 3e-22 Identities = 52/82 (63%), Positives = 68/82 (82%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 R++P SP Y+P+SPSYSP+SPSYSPTSP Y+P+SP+YSPSSP + TSP YSP+SP++SP Sbjct: 2 RYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSP 61 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP +T +Y+P Sbjct: 62 TSPKYSPTSPTYSP-TTPKYSP 82 Score = 108 bits (269), Expect = 4e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP Y+PTSP YSPTSP YSPTSP YSP+SPTYSP++P S TSP YSP+SP ++P Sbjct: 38 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 97 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 98 SPKYSPTSPTYSPTS-PKYSP 117 Score = 107 bits (267), Expect = 7e-22 Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S TSP YSP+SP +SP Sbjct: 65 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 124 Query: 404 S----TGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + YSP+ PGYSP+S + + DD Sbjct: 125 TSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDD 157 Score = 102 bits (255), Expect = 2e-20 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +++P+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S T+P YSP+SP +SP Sbjct: 30 KYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 89 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ P YSP+S + Y+P Sbjct: 90 TSPVYTPTSPKYSPTSPT-YSP 110 Score = 94.0 bits (232), Expect = 8e-18 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP---DYSPSSPQ 414 ++SP+SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 79 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPG 138 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 +SP S YS + P SP + + Sbjct: 139 YSPTSPTYSLTSPAISPDDSDE 160 Score = 91.7 bits (226), Expect = 4e-17 Identities = 43/69 (62%), Positives = 56/69 (81%), Gaps = 1/69 (1%) Frame = -2 Query: 545 PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYS 369 P Y+P SPSY+P+SPSYSPSSP+YSP+SP + TSP YSPSSP+++P S YSP+ P YS Sbjct: 1 PRYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 60 Query: 368 PSSTSQYTP 342 P+S +Y+P Sbjct: 61 PTS-PKYSP 68 [126][TOP] >UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor RepID=C5Y387_SORBI Length = 1874 Score = 109 bits (272), Expect = 2e-22 Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP S SYSPTSP YSPTSPSYSP+S +YSP+SP+ S TSP YSPSSP +SP Sbjct: 1673 YSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPSYSPT 1732 Query: 404 -------STGYSPSQPGYSPSSTSQYTP 342 S GYSP+ PGYSP+S + Y+P Sbjct: 1733 SPTYSPTSLGYSPTSPGYSPTSPT-YSP 1759 Score = 102 bits (255), Expect = 2e-20 Identities = 55/91 (60%), Positives = 65/91 (71%), Gaps = 11/91 (12%) Frame = -2 Query: 581 RFSPSSP----------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432 R++PSSP YSP S SYSPTSP YSPTSPSYSP+S +YSP+SP+ S TSP Y Sbjct: 1642 RYNPSSPSFSPTSTSPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSY 1701 Query: 431 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP+S +SP S YSP+ P YSPSS S Y+P Sbjct: 1702 SPASLSYSPTSPFYSPTSPSYSPSSPS-YSP 1731 Score = 101 bits (252), Expect = 4e-20 Identities = 53/90 (58%), Positives = 63/90 (70%), Gaps = 9/90 (10%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSPTSP YSPTSPSYSP+SPSYSP+SPTYSP+S S TSP YSP+ Sbjct: 1694 YSPTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPT 1753 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 SP +SP S YSP+ P Y+ S T + T Sbjct: 1754 SPTYSPTSPNYSPTSPSYNLSYTEYNSSNT 1783 Score = 95.9 bits (237), Expect = 2e-18 Identities = 52/112 (46%), Positives = 67/112 (59%), Gaps = 24/112 (21%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411 +SP+SP YSP+SPSYSPTSP+YSPTS YSP+SP YSP+SP S TSP+YSP+SP + Sbjct: 1715 YSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLS 1774 Query: 410 --------------------SPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S + YSP+ P YSP+S S P + + + P Sbjct: 1775 YTEYNSSNTYSPTRPRITLDSQAPDYSPTSPTYSPTSPSYSLPSLSYSPNRP 1826 Score = 88.2 bits (217), Expect = 4e-16 Identities = 55/122 (45%), Positives = 65/122 (53%), Gaps = 39/122 (31%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY-------------SPT---------SPSYSPSSPTYSP 468 +SP+SP YSPTSP+YSPTSPSY SPT +P YSP+SPTYSP Sbjct: 1750 YSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSSNTYSPTRPRITLDSQAPDYSPTSPTYSP 1809 Query: 467 SSPYNS----------------GTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKT 336 +SP S SPDYSP+SP FSP+ SP+ YSPSST Q K Sbjct: 1810 TSPSYSLPSLSYSPNRPTDDSGRPSPDYSPTSPNFSPNRSDSPTAADYSPSSTGQAIEKD 1869 Query: 335 ND 330 + Sbjct: 1870 GE 1871 Score = 85.5 bits (210), Expect = 3e-15 Identities = 54/132 (40%), Positives = 64/132 (48%), Gaps = 54/132 (40%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP---------------YNSG 447 +SPSSP YSPTSP+YSPTS YSPTSP YSP+SPTYSP+SP YNS Sbjct: 1722 YSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSS 1781 Query: 446 ---------------------TSPDYSPSSPQFS-----------------PSTGYSPSQ 381 TSP YSP+SP +S PS YSP+ Sbjct: 1782 NTYSPTRPRITLDSQAPDYSPTSPTYSPTSPSYSLPSLSYSPNRPTDDSGRPSPDYSPTS 1841 Query: 380 PGYSPSSTSQYT 345 P +SP+ + T Sbjct: 1842 PNFSPNRSDSPT 1853 Score = 81.6 bits (200), Expect = 4e-14 Identities = 50/106 (47%), Positives = 63/106 (59%), Gaps = 27/106 (25%) Frame = -2 Query: 578 FSPSSP-YSPTSP------SYSPTSPSYSP-------------------TSPSYSPSSPT 477 ++P SP YSPT+P SYS SP Y+P TSPSYSP+S + Sbjct: 1606 YTPMSPVYSPTTPVSSQIQSYSSASPIYNPISPNSSRYNPSSPSFSPTSTSPSYSPASAS 1665 Query: 476 YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 YSP+SP+ S TSP YSP+S +SP S YSP+ P YSP+S S Y+P Sbjct: 1666 YSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLS-YSP 1710 Score = 78.2 bits (191), Expect = 4e-13 Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 19/97 (19%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSP------TYSPSSPYNSGTSPD---YSPS 423 S S+ Y+P SP YSPT+P Y+P SP YSP++P +YS +SP + SP+ Y+PS Sbjct: 1587 STSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNPISPNSSRYNPS 1646 Query: 422 SPQFSP----------STGYSPSQPGYSPSSTSQYTP 342 SP FSP S YSP+ P YSP+S S Y+P Sbjct: 1647 SPSFSPTSTSPSYSPASASYSPTSPFYSPTSPS-YSP 1682 Score = 73.9 bits (180), Expect = 8e-12 Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 11/86 (12%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP------DYSPSSPQFSP 405 +PY+ SP + TS SY+P SP YSP++P Y+P SP S T+P YS +SP ++P Sbjct: 1576 TPYNAASPVNASTSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNP 1635 Query: 404 ----STGYSPSQPGYSPSSTS-QYTP 342 S+ Y+PS P +SP+STS Y+P Sbjct: 1636 ISPNSSRYNPSSPSFSPTSTSPSYSP 1661 Score = 62.4 bits (150), Expect = 2e-08 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 5/80 (6%) Frame = -2 Query: 560 YSPTSPSYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYS 390 Y SP Y+P SP + TS SY+P SP YSP++P + SP YSP++P S YS Sbjct: 1568 YMAVSPIYTPYNAASPVNASTSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYS 1627 Query: 389 PSQPGYSPSS--TSQYTPKT 336 + P Y+P S +S+Y P + Sbjct: 1628 SASPIYNPISPNSSRYNPSS 1647 [127][TOP] >UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MI48_9CHLO Length = 1694 Score = 109 bits (272), Expect = 2e-22 Identities = 54/86 (62%), Positives = 67/86 (77%), Gaps = 7/86 (8%) Frame = -2 Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1556 YSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1615 Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S YSP+ P YSP+S + Y+P Sbjct: 1616 AYSPTSPAYSPTSPAYSPTSPA-YSP 1640 Score = 109 bits (272), Expect = 2e-22 Identities = 52/75 (69%), Positives = 63/75 (84%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1582 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1641 Query: 404 STGYSPSQPGYSPSS 360 S YSP+ P YSP+S Sbjct: 1642 SPAYSPTSPQYSPTS 1656 Score = 106 bits (264), Expect = 1e-21 Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 7/86 (8%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-----PSSPTYSPSSPYNSGTSPDYSPSSP 417 FSP+SP YSPTSP+YSPTSP+YSPTSP+YS P+SP YSP+SP S TSP YSP+SP Sbjct: 1528 FSPTSPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSP 1587 Query: 416 QFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S YSP+ P YSP+S + Y+P Sbjct: 1588 AYSPTSPAYSPTSPAYSPTSPA-YSP 1612 Score = 103 bits (257), Expect = 1e-20 Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 11/98 (11%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SPQ+SP+ Sbjct: 1596 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPT 1655 Query: 401 T----------GYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + SP+ P YSP+ ++P K++ Sbjct: 1656 SVGLSDVENAPTRSPTSPQYSPTE-GAFSPMETTEKEE 1692 Score = 94.0 bits (232), Expect = 8e-18 Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 14/93 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPS-----YSPTSPSYS-------PSSPTYSPSSPYNSGTSP 438 +SP+SP YSPTSP+YSPTSP+ YSPTSP+YS P+SP YSP+SP S TSP Sbjct: 1542 YSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1601 Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 YSP+SP +SP S YSP+ P YSP+S + Y+P Sbjct: 1602 AYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1633 [128][TOP] >UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba castellanii RepID=O00820_ACACA Length = 1569 Score = 109 bits (272), Expect = 2e-22 Identities = 52/74 (70%), Positives = 60/74 (81%), Gaps = 2/74 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SPSSP YSP SP YSP+SP+YSPTSP YSP+SP+YSP+SP S TSP YSPSSP +SP Sbjct: 1496 YSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPSSPSYSPT 1555 Query: 404 STGYSPSQPGYSPS 363 S YSP+ P YSPS Sbjct: 1556 SPSYSPTSPSYSPS 1569 Score = 108 bits (270), Expect = 3e-22 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SPSSP YSP+SP YSP SP YSP+SP+YSP+SP YSP+SP S TSP YSP+SP +SPS Sbjct: 1489 YSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPS 1548 Query: 401 T-GYSPSQPGYSPSSTSQYTP 342 + YSP+ P YSP+S S Y+P Sbjct: 1549 SPSYSPTSPSYSPTSPS-YSP 1568 Score = 106 bits (264), Expect = 1e-21 Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP YSP+SP YSP+SP YSP+SP YSP+SP YSPSSP S TSP YSP+ Sbjct: 1468 YSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPA 1527 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S YSP+ P YSPSS S Y+P Sbjct: 1528 SPSYSPTSPAYSPTSPSYSPSSPS-YSP 1554 Score = 100 bits (248), Expect = 1e-19 Identities = 52/80 (65%), Positives = 58/80 (72%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SPSSP YSP SP YSP YSP+SP YSPSSP YSPSSP S SP YSPSSP +SP S Sbjct: 1462 SPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTS 1521 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S + Y+P Sbjct: 1522 PKYSPASPSYSPTSPA-YSP 1540 Score = 93.6 bits (231), Expect = 1e-17 Identities = 49/80 (61%), Positives = 55/80 (68%), Gaps = 5/80 (6%) Frame = -2 Query: 566 SPYSPTS----PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SP SP P YSP+SP YSP SP YSPSSP YSP+SP S SP YSP+SP +SP S Sbjct: 1483 SPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTS 1542 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSPS P YSP+S S Y+P Sbjct: 1543 PSYSPSSPSYSPTSPS-YSP 1561 Score = 87.4 bits (215), Expect = 7e-16 Identities = 48/85 (56%), Positives = 57/85 (67%), Gaps = 6/85 (7%) Frame = -2 Query: 578 FSPSSPYSPTSP-----SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 +SP + SP S SP+SPSYSP SP YSP+ YSPSSP S +SP YSPSSP Sbjct: 1443 YSPYVDFGEFSPGRGSFSPSPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPG 1502 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S GYSPS P YSP+S +Y+P Sbjct: 1503 YSPASPGYSPSSPAYSPTS-PKYSP 1526 Score = 58.9 bits (141), Expect = 3e-07 Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 3/84 (3%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 F ++P SP +P + SYSP +SP ++SPS +SP YSP+SP +SP Sbjct: 1424 FFHTTPMYRMSPGATPAA-SYSPYVDFGEFSPGRGSFSPSP-----SSPSYSPASPGYSP 1477 Query: 404 S-TGYSPSQPGYSPSSTSQYTPKT 336 + GYSPS PGYSPSS Y+P + Sbjct: 1478 AGAGYSPSSPGYSPSSPG-YSPSS 1500 [129][TOP] >UniRef100_A7AWJ0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AWJ0_BABBO Length = 1746 Score = 108 bits (271), Expect = 2e-22 Identities = 54/81 (66%), Positives = 65/81 (80%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1602 YSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1661 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1662 SPAYSPTSPAYSPTSPA-YSP 1681 Score = 108 bits (269), Expect = 4e-22 Identities = 52/83 (62%), Positives = 67/83 (80%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP+ Sbjct: 1623 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1682 Query: 401 T---GYSPSQPGYSPSSTSQYTP 342 + GY P+ P Y P+S + Y+P Sbjct: 1683 SPNLGYLPTSPAYRPTSPA-YSP 1704 Score = 105 bits (262), Expect = 3e-21 Identities = 54/83 (65%), Positives = 66/83 (79%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1616 YSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1675 Query: 404 STGYSPSQP--GYSPSSTSQYTP 342 S YSP+ P GY P+S + Y P Sbjct: 1676 SPAYSPTSPNLGYLPTSPA-YRP 1697 Score = 103 bits (258), Expect = 7e-21 Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 5/93 (5%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG---TSPDYSPSSPQF 411 +SP+SP YSPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP N G TSP Y P+SP + Sbjct: 1644 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP-NLGYLPTSPAYRPTSPAY 1702 Query: 410 SP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP S YSP+ P YSP+S + +DP Sbjct: 1703 SPTSPAYSPTSPAYSPTSPVYSPTSPEYSPEDP 1735 Score = 97.4 bits (241), Expect = 7e-19 Identities = 49/83 (59%), Positives = 61/83 (73%), Gaps = 4/83 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP YSPTSP+YSPTSP+YSPTSP+ Y P+SP Y P+SP S TSP YSP+SP +S Sbjct: 1658 YSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSPAYSPTSPAYSPTSPAYS 1717 Query: 407 PSTG-YSPSQPGYSPSSTSQYTP 342 P++ YSP+ P YSP P Sbjct: 1718 PTSPVYSPTSPEYSPEDPFSPNP 1740 Score = 94.4 bits (233), Expect = 6e-18 Identities = 48/80 (60%), Positives = 58/80 (72%), Gaps = 2/80 (2%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SP+SP YSPTSP Y YSP SP+YSP+SP YSP+SP S TSP YSP+SP +SP S Sbjct: 1582 SPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTS 1641 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S + Y+P Sbjct: 1642 PAYSPTSPAYSPTSPA-YSP 1660 Score = 87.0 bits (214), Expect = 9e-16 Identities = 54/109 (49%), Positives = 63/109 (57%), Gaps = 30/109 (27%) Frame = -2 Query: 578 FSPS--SPYSPTSPSY--------------------SPTSPSYSPTSP-------SYSPS 486 FSP+ SP SP SPSY SPTSP YSPTSP YSP+ Sbjct: 1546 FSPTIMSPQSPVSPSYAPLSPNPLSPNPLSPSMGMMSPTSPVYSPTSPVYGQAGGVYSPA 1605 Query: 485 SPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP YSP+SP S TSP YSP+SP +SP S YSP+ P YSP+S + Y+P Sbjct: 1606 SPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1653 [130][TOP] >UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura RepID=Q9XZU9_DROSU Length = 1889 Score = 107 bits (266), Expect = 9e-22 Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SPSYSPTSP YSPSSP+YSP+SP + +P YSP+SP +S S Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776 Score = 103 bits (258), Expect = 7e-21 Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S +SP YSP+SP ++P+T Sbjct: 1667 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPAT 1726 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S Y+P Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744 Score = 91.3 bits (225), Expect = 5e-17 Identities = 53/110 (48%), Positives = 68/110 (61%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462 +SPSSP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S Sbjct: 1708 YSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPS 1767 Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815 Score = 90.5 bits (223), Expect = 8e-17 Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P Sbjct: 1566 SPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPN 1625 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333 F+P STGYSPS GYSP+S Y+P +N Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652 Score = 90.1 bits (222), Expect = 1e-16 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801 Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342 PSSPQ SPS TG YSPS YSP+S + YTP Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850 Score = 89.4 bits (220), Expect = 2e-16 Identities = 55/102 (53%), Positives = 62/102 (60%), Gaps = 21/102 (20%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459 F+P S YSP++ YSPTSP YSPTS PS YSPSS YSP+SP Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 S TSP YSPSSP +SP S YSPS P YSP+S + YTP T Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPN-YTPAT 1726 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438 SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832 Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++P+ YSP+ P YSP++ S Y+P Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872 Score = 87.8 bits (216), Expect = 6e-16 Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692 Query: 458 YNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SPS+ YSP+ P Y+P +T Y+P + + P Sbjct: 1693 SYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1740 Score = 87.0 bits (214), Expect = 9e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1868 SHYSPTSPAYSPSS 1881 Score = 86.3 bits (212), Expect = 2e-15 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 ++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+ Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813 Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ YSPSST +Y+P Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885 Query: 407 PS 402 S Sbjct: 1886 ES 1887 Score = 65.9 bits (159), Expect = 2e-09 Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 19/98 (19%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSP 1577 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++ S+ YSPS P YSP+S P Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615 [131][TOP] >UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis RepID=Q9XZS2_DROMD Length = 1889 Score = 107 bits (266), Expect = 9e-22 Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SPSYSPTSP YSPSSP+YSP+SP + +P YSP+SP +S S Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776 Score = 103 bits (258), Expect = 7e-21 Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S +SP YSP+SP ++P+T Sbjct: 1667 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPAT 1726 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S Y+P Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744 Score = 91.3 bits (225), Expect = 5e-17 Identities = 53/110 (48%), Positives = 68/110 (61%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462 +SPSSP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S Sbjct: 1708 YSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPS 1767 Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815 Score = 90.5 bits (223), Expect = 8e-17 Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P Sbjct: 1566 SPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPN 1625 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333 F+P STGYSPS GYSP+S Y+P +N Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652 Score = 90.1 bits (222), Expect = 1e-16 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801 Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342 PSSPQ SPS TG YSPS YSP+S + YTP Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850 Score = 89.4 bits (220), Expect = 2e-16 Identities = 55/102 (53%), Positives = 62/102 (60%), Gaps = 21/102 (20%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459 F+P S YSP++ YSPTSP YSPTS PS YSPSS YSP+SP Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 S TSP YSPSSP +SP S YSPS P YSP+S + YTP T Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPN-YTPAT 1726 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438 SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832 Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++P+ YSP+ P YSP++ S Y+P Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872 Score = 87.8 bits (216), Expect = 6e-16 Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692 Query: 458 YNSGTSPDYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SPS+ YSP+ P Y+P +T Y+P + + P Sbjct: 1693 SYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1740 Score = 87.0 bits (214), Expect = 9e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1868 SHYSPTSPAYSPSS 1881 Score = 86.3 bits (212), Expect = 2e-15 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 ++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+ Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813 Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ YSPSST +Y+P Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885 Query: 407 PS 402 S Sbjct: 1886 ES 1887 Score = 65.9 bits (159), Expect = 2e-09 Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 19/98 (19%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSP 1577 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++ S+ YSPS P YSP+S P Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615 [132][TOP] >UniRef100_Q5EXZ8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Periplaneta americana RepID=Q5EXZ8_PERAM Length = 97 Score = 107 bits (266), Expect = 9e-22 Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 10/83 (12%) Frame = -2 Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 +SPSSP YSP+SPSYSPTSP+YSPTSP YSPSS YSP+SP + TSP+YSP Sbjct: 8 YSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTPTSPNYSP 67 Query: 425 SSPQFSPST-GYSPSQPGYSPSS 360 SSP +SP+ GYSP+ P YSP+S Sbjct: 68 SSPTYSPAVPGYSPTSPTYSPTS 90 Score = 100 bits (249), Expect = 8e-20 Identities = 53/89 (59%), Positives = 67/89 (75%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP-YSPTSPS--------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 +SP+SP YSP+SP YSP+SPSYSPTSP+YSP+SP YSPSS S TSP Y+P Sbjct: 1 YSPTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTP 60 Query: 425 SSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 +SP +SPS+ YSP+ PGYSP+S + Y+P Sbjct: 61 TSPNYSPSSPTYSPAVPGYSPTSPT-YSP 88 Score = 85.9 bits (211), Expect = 2e-15 Identities = 43/70 (61%), Positives = 56/70 (80%), Gaps = 2/70 (2%) Frame = -2 Query: 539 YSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSPQFSPSTG-YSPSQPGYSP 366 YSPTSPSYSP+SP ++PS+ T YSPSSP S TSP YSP+SPQ+SPS+ YSP+ P Y+P Sbjct: 1 YSPTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTP 60 Query: 365 SSTSQYTPKT 336 +S + Y+P + Sbjct: 61 TSPN-YSPSS 69 Score = 85.1 bits (209), Expect = 4e-15 Identities = 39/57 (68%), Positives = 48/57 (84%), Gaps = 1/57 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 +SP+SP YSP+S YSPTSP+Y+PTSP+YSPSSPTYSP+ P S TSP YSP+SP + Sbjct: 37 YSPTSPQYSPSSSKYSPTSPTYTPTSPNYSPSSPTYSPAVPGYSPTSPTYSPTSPAY 93 [133][TOP] >UniRef100_B4R347 RNA polymerase II 215kD subunit n=1 Tax=Drosophila simulans RepID=B4R347_DROSI Length = 552 Score = 106 bits (264), Expect = 1e-21 Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T Sbjct: 330 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 389 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S QY+P Sbjct: 390 PSYSPTSPNYSAS--PQYSP 407 Score = 105 bits (263), Expect = 2e-21 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 343 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 402 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 403 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 439 Score = 90.5 bits (223), Expect = 8e-17 Identities = 57/111 (51%), Positives = 65/111 (58%), Gaps = 31/111 (27%) Frame = -2 Query: 581 RFSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDY 432 ++SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP Y Sbjct: 404 QYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY 463 Query: 431 SPSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342 SPSSPQ SPS TG YSPS YSP+S + YTP Sbjct: 464 SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 513 Score = 90.1 bits (222), Expect = 1e-16 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462 +SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S Sbjct: 371 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 430 Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P Sbjct: 431 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 478 Score = 87.0 bits (214), Expect = 9e-16 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPSS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP Sbjct: 296 YSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 355 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P Sbjct: 356 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 403 Score = 86.3 bits (212), Expect = 2e-15 Identities = 48/108 (44%), Positives = 59/108 (54%), Gaps = 28/108 (25%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-------------SGTSPD 435 SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S TSP Sbjct: 430 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 489 Query: 434 YSPSSPQFSPST---------------GYSPSQPGYSPSSTSQYTPKT 336 YSP+ +SPS+ YSP+ P YSP++ S Y+PK+ Sbjct: 490 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKS 537 Score = 85.5 bits (210), Expect = 3e-15 Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 12/90 (13%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPY-----NSGTSPDYS 429 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + T+P+++ Sbjct: 231 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPRYASTTPNFN 290 Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P S +SP S+GYSP+ PGYSP++ Q +P Sbjct: 291 PQSTGYSPSSSGYSPTSPGYSPTAQFQSSP 320 Score = 82.0 bits (201), Expect = 3e-14 Identities = 48/97 (49%), Positives = 59/97 (60%), Gaps = 23/97 (23%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSP-------------TSPSYSPSSPTYSPSSPYNSGT 444 ++SP+SP YSPTSP YSP+SP +SP TSP YSP+ YSPSS S T Sbjct: 448 QYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 507 Query: 443 SP-------DYSPSSPQFSPS--TGYSPSQPGYSPSS 360 SP +YSP+SP +SP+ + YSP P YSPSS Sbjct: 508 SPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSS 544 Score = 77.4 bits (189), Expect = 7e-13 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 40/121 (33%) Frame = -2 Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSP--------------------- 480 +SP+SP Y+ T+P+++P S YSP+S YSP+SP Sbjct: 270 YSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNI 329 Query: 479 ------------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPK 339 YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+S + YTP Sbjct: 330 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPV 388 Query: 338 T 336 T Sbjct: 389 T 389 Score = 77.0 bits (188), Expect = 1e-12 Identities = 47/96 (48%), Positives = 54/96 (56%), Gaps = 20/96 (20%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP----- 405 SSP SP PS SP P+ SPSYSP+SP Y+ SSP G SP+YSPSSP +SP Sbjct: 221 SSPSSP-GPSMSPYFPASPSVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLY 277 Query: 404 ---------------STGYSPSQPGYSPSSTSQYTP 342 STGYSPS GYSP+S Y+P Sbjct: 278 ASPRYASTTPNFNPQSTGYSPSSSGYSPTSPG-YSP 312 Score = 74.3 bits (181), Expect = 6e-12 Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S SP YSPSSP F Sbjct: 489 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSSPTFE 548 Query: 407 PS 402 S Sbjct: 549 ES 550 Score = 67.0 bits (162), Expect = 1e-09 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 19/99 (19%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 183 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 242 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTPK 339 YSP+SP ++ S+ YSPS P YSP+S +P+ Sbjct: 243 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPR 281 [134][TOP] >UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia RepID=B4IK28_DROSE Length = 1887 Score = 106 bits (264), Expect = 1e-21 Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S QY+P Sbjct: 1725 PSYSPTSPNYSAS--PQYSP 1742 Score = 105 bits (263), Expect = 2e-21 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1738 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1774 Score = 90.5 bits (223), Expect = 8e-17 Identities = 57/111 (51%), Positives = 65/111 (58%), Gaps = 31/111 (27%) Frame = -2 Query: 581 RFSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDY 432 ++SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP Y Sbjct: 1739 QYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY 1798 Query: 431 SPSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342 SPSSPQ SPS TG YSPS YSP+S + YTP Sbjct: 1799 SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1848 Score = 90.1 bits (222), Expect = 1e-16 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462 +SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S Sbjct: 1706 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 1765 Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438 SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830 Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++P+ YSP+ P YSP++ S Y+P Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1870 Score = 87.0 bits (214), Expect = 9e-16 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPSS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP Sbjct: 1631 YSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 1690 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P Sbjct: 1691 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1738 Score = 87.0 bits (214), Expect = 9e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ Sbjct: 1806 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1865 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1866 SHYSPTSPAYSPSS 1879 Score = 85.5 bits (210), Expect = 3e-15 Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 12/90 (13%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPY-----NSGTSPDYS 429 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + T+P+++ Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPRYASTTPNFN 1625 Query: 428 PSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P S +SP S+GYSP+ PGYSP++ Q +P Sbjct: 1626 PQSTGYSPSSSGYSPTSPGYSPTAQFQSSP 1655 Score = 77.4 bits (189), Expect = 7e-13 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 40/121 (33%) Frame = -2 Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSP--------------------- 480 +SP+SP Y+ T+P+++P S YSP+S YSP+SP Sbjct: 1605 YSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNI 1664 Query: 479 ------------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPK 339 YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+S + YTP Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPV 1723 Query: 338 T 336 T Sbjct: 1724 T 1724 Score = 77.0 bits (188), Expect = 1e-12 Identities = 47/96 (48%), Positives = 54/96 (56%), Gaps = 20/96 (20%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP----- 405 SSP SP PS SP P+ SPSYSP+SP Y+ SSP G SP+YSPSSP +SP Sbjct: 1556 SSPSSP-GPSMSPYFPASPSVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLY 1612 Query: 404 ---------------STGYSPSQPGYSPSSTSQYTP 342 STGYSPS GYSP+S Y+P Sbjct: 1613 ASPRYASTTPNFNPQSTGYSPSSSGYSPTSPG-YSP 1647 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F Sbjct: 1824 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1883 Query: 407 PS 402 S Sbjct: 1884 ES 1885 Score = 67.0 bits (162), Expect = 1e-09 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 19/99 (19%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTPK 339 YSP+SP ++ S+ YSPS P YSP+S +P+ Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616 [135][TOP] >UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster RepID=A9UNH9_DROME Length = 1887 Score = 106 bits (264), Expect = 1e-21 Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S QY+P Sbjct: 1725 PSYSPTSPNYSAS--PQYSP 1742 Score = 105 bits (263), Expect = 2e-21 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1738 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1774 Score = 91.7 bits (226), Expect = 4e-17 Identities = 58/120 (48%), Positives = 67/120 (55%), Gaps = 31/120 (25%) Frame = -2 Query: 581 RFSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDY 432 ++SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP Y Sbjct: 1739 QYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY 1798 Query: 431 SPSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SPSSPQ SPS TG YSPS YSP+S + YTP + P Sbjct: 1799 SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTPTARNYSPTP 1857 Score = 90.1 bits (222), Expect = 1e-16 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462 +SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S Sbjct: 1706 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 1765 Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813 Score = 89.4 bits (220), Expect = 2e-16 Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSP 417 SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP YSP+ Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830 Query: 416 QFSPST---------------GYSPSQPGYSPSSTSQYTP 342 +SPS+ YSP+ P YSP++ S Y+P Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSP 1870 Score = 86.3 bits (212), Expect = 2e-15 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPSS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP Sbjct: 1631 YSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 1690 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P Sbjct: 1691 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1738 Score = 85.1 bits (209), Expect = 4e-15 Identities = 41/74 (55%), Positives = 52/74 (70%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+ P +SP+ Sbjct: 1806 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAP 1865 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1866 SHYSPTSPAYSPSS 1879 Score = 84.0 bits (206), Expect = 8e-15 Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 7/79 (8%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYA--SPRYASTTPN 1623 Query: 413 FSP-STGYSPSQPGYSPSS 360 F+P STGYSPS GYSP+S Sbjct: 1624 FNPQSTGYSPSSSGYSPTS 1642 Score = 77.4 bits (189), Expect = 7e-13 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 40/121 (33%) Frame = -2 Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSP--------------------- 480 +SP+SP Y+ T+P+++P S YSP+S YSP+SP Sbjct: 1605 YSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNI 1664 Query: 479 ------------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPK 339 YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+S + YTP Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPV 1723 Query: 338 T 336 T Sbjct: 1724 T 1724 Score = 74.7 bits (182), Expect = 5e-12 Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+ P YSP++P + S TSP YSPSSP F Sbjct: 1824 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSSPTFE 1883 Query: 407 PS 402 S Sbjct: 1884 ES 1885 Score = 67.0 bits (162), Expect = 1e-09 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 19/99 (19%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTPK 339 YSP+SP ++ S+ YSPS P YSP+S +P+ Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616 [136][TOP] >UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila melanogaster RepID=RPB1_DROME Length = 1887 Score = 106 bits (264), Expect = 1e-21 Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1724 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S QY+P Sbjct: 1725 PSYSPTSPNYSAS--PQYSP 1742 Score = 105 bits (263), Expect = 2e-21 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1738 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1774 Score = 90.5 bits (223), Expect = 8e-17 Identities = 57/111 (51%), Positives = 65/111 (58%), Gaps = 31/111 (27%) Frame = -2 Query: 581 RFSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDY 432 ++SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP Y Sbjct: 1739 QYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLY 1798 Query: 431 SPSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342 SPSSPQ SPS TG YSPS YSP+S + YTP Sbjct: 1799 SPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1848 Score = 90.1 bits (222), Expect = 1e-16 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462 +SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S Sbjct: 1706 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPS 1765 Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P Sbjct: 1766 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1813 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438 SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830 Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++P+ YSP+ P YSP++ S Y+P Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1870 Score = 87.0 bits (214), Expect = 9e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ Sbjct: 1806 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1865 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1866 SHYSPTSPAYSPSS 1879 Score = 86.3 bits (212), Expect = 2e-15 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPSS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP Sbjct: 1631 YSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 1690 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P Sbjct: 1691 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1738 Score = 84.0 bits (206), Expect = 8e-15 Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 7/79 (8%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYA--SPRYASTTPN 1623 Query: 413 FSP-STGYSPSQPGYSPSS 360 F+P STGYSPS GYSP+S Sbjct: 1624 FNPQSTGYSPSSSGYSPTS 1642 Score = 77.4 bits (189), Expect = 7e-13 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 40/121 (33%) Frame = -2 Query: 578 FSPSSP------YSPTSPSYSPTSPSYSPTSPSYSPSSP--------------------- 480 +SP+SP Y+ T+P+++P S YSP+S YSP+SP Sbjct: 1605 YSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNI 1664 Query: 479 ------------TYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPK 339 YSP+SP S TSP YSPSSP +SP S YSP+ P YSP+S + YTP Sbjct: 1665 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPV 1723 Query: 338 T 336 T Sbjct: 1724 T 1724 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F Sbjct: 1824 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1883 Query: 407 PS 402 S Sbjct: 1884 ES 1885 Score = 67.0 bits (162), Expect = 1e-09 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 19/99 (19%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTPK 339 YSP+SP ++ S+ YSPS P YSP+S +P+ Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPR 1616 [137][TOP] >UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS Length = 1811 Score = 105 bits (263), Expect = 2e-21 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 1602 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1661 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1662 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1698 Score = 105 bits (262), Expect = 3e-21 Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T Sbjct: 1589 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1648 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S Y+P Sbjct: 1649 PSYSPTSPNYSAS--PHYSP 1666 Score = 95.5 bits (236), Expect = 3e-18 Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 18/97 (18%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-- 408 +SPSSP YSPTSP YSPTSPSYSPTSP+Y+P++P+YSP+SP N SP YSP+SP +S Sbjct: 1616 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQT 1674 Query: 407 -------------PSTGY--SPSQPGYSPSSTSQYTP 342 PS Y SP P Y+P S QY+P Sbjct: 1675 GAKYSPTSPTYSPPSPSYDGSPGSPQYTPGS-PQYSP 1710 Score = 90.9 bits (224), Expect = 7e-17 Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P Sbjct: 1488 SPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPN 1547 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333 F+P STGYSPS GYSP+S Y+P +N Sbjct: 1548 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1574 Score = 90.1 bits (222), Expect = 1e-16 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426 +SP+SP YSP SP+YS T YSPTSP+YSP SP+Y SP SP + SP YSP Sbjct: 1651 YSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1710 Query: 425 SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 +SP++SP++ YSPS P +SPS +QY+P Sbjct: 1711 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1737 Score = 90.1 bits (222), Expect = 1e-16 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS Sbjct: 1664 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1723 Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342 PSSPQ SPS TG YSPS YSP+S + YTP Sbjct: 1724 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1772 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438 SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP Sbjct: 1695 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1754 Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++P+ YSP+ P YSP++ S Y+P Sbjct: 1755 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1794 Score = 88.2 bits (217), Expect = 4e-16 Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 21/102 (20%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459 F+P S YSP++ YSPTSP YSPTS PS YSPSS YSP+SP Sbjct: 1548 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1607 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 S TSP YSPSSP +SP S YSP+ P YSP+S + YTP T Sbjct: 1608 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1648 Score = 87.0 bits (214), Expect = 9e-16 Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP Sbjct: 1555 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1614 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SP S YSP+ P Y+P +T Y+P + + P Sbjct: 1615 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1662 Score = 87.0 bits (214), Expect = 9e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ Sbjct: 1730 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1789 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1790 SHYSPTSPAYSPSS 1803 Score = 86.3 bits (212), Expect = 2e-15 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 ++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+ Sbjct: 1677 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1735 Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ YSPSST +Y+P Sbjct: 1736 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1765 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F Sbjct: 1748 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1807 Query: 407 PS 402 S Sbjct: 1808 ES 1809 Score = 65.5 bits (158), Expect = 3e-09 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 1440 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSP 1499 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360 YSP+SP ++ S+ YSPS P YSP+S Sbjct: 1500 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1531 [138][TOP] >UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche RepID=Q9XZS1_DROGU Length = 1889 Score = 105 bits (263), Expect = 2e-21 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776 Score = 105 bits (262), Expect = 3e-21 Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T Sbjct: 1667 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S Y+P Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744 Score = 95.5 bits (236), Expect = 3e-18 Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 18/97 (18%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-- 408 +SPSSP YSPTSP YSPTSPSYSPTSP+Y+P++P+YSP+SP N SP YSP+SP +S Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQT 1752 Query: 407 -------------PSTGY--SPSQPGYSPSSTSQYTP 342 PS Y SP P Y+P S QY+P Sbjct: 1753 GAKYSPTSPTYSPPSPSYDGSPGSPQYTPGS-PQYSP 1788 Score = 90.5 bits (223), Expect = 8e-17 Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P Sbjct: 1566 SPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPN 1625 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333 F+P STGYSPS GYSP+S Y+P +N Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652 Score = 90.1 bits (222), Expect = 1e-16 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426 +SP+SP YSP SP+YS T YSPTSP+YSP SP+Y SP SP + SP YSP Sbjct: 1729 YSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1788 Query: 425 SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 +SP++SP++ YSPS P +SPS +QY+P Sbjct: 1789 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815 Score = 90.1 bits (222), Expect = 1e-16 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801 Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342 PSSPQ SPS TG YSPS YSP+S + YTP Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438 SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832 Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++P+ YSP+ P YSP++ S Y+P Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872 Score = 88.2 bits (217), Expect = 4e-16 Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 21/102 (20%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459 F+P S YSP++ YSPTSP YSPTS PS YSPSS YSP+SP Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 S TSP YSPSSP +SP S YSP+ P YSP+S + YTP T Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1726 Score = 87.0 bits (214), Expect = 9e-16 Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SP S YSP+ P Y+P +T Y+P + + P Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1740 Score = 87.0 bits (214), Expect = 9e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1868 SHYSPTSPAYSPSS 1881 Score = 86.3 bits (212), Expect = 2e-15 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 ++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+ Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813 Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ YSPSST +Y+P Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885 Query: 407 PS 402 S Sbjct: 1886 ES 1887 Score = 65.9 bits (159), Expect = 2e-09 Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 19/98 (19%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSP 1577 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++ S+ YSPS P YSP+S P Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615 [139][TOP] >UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=Q29IN2_DROPS Length = 1889 Score = 105 bits (263), Expect = 2e-21 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1776 Score = 105 bits (262), Expect = 3e-21 Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T Sbjct: 1667 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S Y+P Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744 Score = 95.5 bits (236), Expect = 3e-18 Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 18/97 (18%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-- 408 +SPSSP YSPTSP YSPTSPSYSPTSP+Y+P++P+YSP+SP N SP YSP+SP +S Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQT 1752 Query: 407 -------------PSTGY--SPSQPGYSPSSTSQYTP 342 PS Y SP P Y+P S QY+P Sbjct: 1753 GAKYSPTSPTYSPPSPSYDGSPGSPQYTPGS-PQYSP 1788 Score = 90.9 bits (224), Expect = 7e-17 Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P Sbjct: 1566 SPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPN 1625 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333 F+P STGYSPS GYSP+S Y+P +N Sbjct: 1626 FNPQSTGYSPSASGYSPTS-PVYSPTSN 1652 Score = 90.1 bits (222), Expect = 1e-16 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426 +SP+SP YSP SP+YS T YSPTSP+YSP SP+Y SP SP + SP YSP Sbjct: 1729 YSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1788 Query: 425 SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 +SP++SP++ YSPS P +SPS +QY+P Sbjct: 1789 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815 Score = 90.1 bits (222), Expect = 1e-16 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS Sbjct: 1742 YSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801 Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342 PSSPQ SPS TG YSPS YSP+S + YTP Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438 SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832 Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++P+ YSP+ P YSP++ S Y+P Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872 Score = 88.2 bits (217), Expect = 4e-16 Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 21/102 (20%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459 F+P S YSP++ YSPTSP YSPTS PS YSPSS YSP+SP Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 S TSP YSPSSP +SP S YSP+ P YSP+S + YTP T Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1726 Score = 87.0 bits (214), Expect = 9e-16 Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP Sbjct: 1633 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1692 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SP S YSP+ P Y+P +T Y+P + + P Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1740 Score = 87.0 bits (214), Expect = 9e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1868 SHYSPTSPAYSPSS 1881 Score = 86.3 bits (212), Expect = 2e-15 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 ++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+ Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813 Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ YSPSST +Y+P Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885 Query: 407 PS 402 S Sbjct: 1886 ES 1887 Score = 65.5 bits (158), Expect = 3e-09 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSP 1577 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360 YSP+SP ++ S+ YSPS P YSP+S Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609 [140][TOP] >UniRef100_C6F1E9 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax RepID=C6F1E9_PLAVI Length = 225 Score = 105 bits (263), Expect = 2e-21 Identities = 51/75 (68%), Positives = 60/75 (80%), Gaps = 3/75 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 62 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSP 121 Query: 404 STGY--SPSQPGYSP 366 S+ +PS P YSP Sbjct: 122 SSPVPNNPSSPHYSP 136 Score = 102 bits (253), Expect = 3e-20 Identities = 51/81 (62%), Positives = 61/81 (75%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 115 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSPS P + S+ Y+P Sbjct: 116 SPQYSPSSPVPNNPSSPHYSP 136 Score = 101 bits (252), Expect = 4e-20 Identities = 50/79 (63%), Positives = 57/79 (72%), Gaps = 1/79 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112 Query: 392 SPSQPGYSPSSTSQYTPKT 336 SP+ P YSPSS P + Sbjct: 113 SPTSPQYSPSSPVPNNPSS 131 Score = 94.7 bits (234), Expect = 5e-18 Identities = 51/96 (53%), Positives = 63/96 (65%), Gaps = 15/96 (15%) Frame = -2 Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 +SP+SP +S SP YS TSP YSPTSP YSP+SP YSP+SP S TS Sbjct: 29 YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 88 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 P YSP+SP++SP S YSP+ P YSP+S QY+P + Sbjct: 89 PKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSPSS 123 Score = 82.8 bits (203), Expect = 2e-14 Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414 ++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP P++P +SP YSP +SP+ Sbjct: 90 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 143 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 FSP S YS S P Y S ++ Sbjct: 144 FSPTSPAYSISSPVYDQSGNAR 165 [141][TOP] >UniRef100_C6F0A2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum RepID=C6F0A2_PLAFA Length = 223 Score = 105 bits (263), Expect = 2e-21 Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP Sbjct: 40 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 99 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S +Y+P Sbjct: 100 SPKYSPTSPKYSPTS-PKYSP 119 Score = 100 bits (250), Expect = 6e-20 Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 96 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S +Y+P Sbjct: 97 SPTSPKYSPTS-PKYSP 112 Score = 100 bits (249), Expect = 8e-20 Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 3/77 (3%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP Sbjct: 60 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 119 Query: 404 ST--GYSPSQPGYSPSS 360 ++ + + P YSP S Sbjct: 120 TSPVAQNIASPNYSPYS 136 Score = 94.4 bits (233), Expect = 6e-18 Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 +S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S +Y+P Sbjct: 90 SPTSPKYSPTS-PKYSP 105 Score = 92.4 bits (228), Expect = 2e-17 Identities = 50/89 (56%), Positives = 62/89 (69%), Gaps = 9/89 (10%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPDYSP 426 ++SP+SP YSPTSP YSPTSP YSPTSP YS P+SP YSP+SP S TSP YSP Sbjct: 46 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 105 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP++SP S YSP+ P ++ Y+P Sbjct: 106 TSPKYSPTSPKYSPTSPVAQNIASPNYSP 134 Score = 80.1 bits (196), Expect = 1e-13 Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S TSP Sbjct: 88 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 147 Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330 YS SSP + S + P P Y S Q D Sbjct: 148 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 186 Score = 76.3 bits (186), Expect = 2e-12 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 12/85 (14%) Frame = -2 Query: 560 YSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 YSPTSP+Y+ + YSPTSP Y+ SP YS +SP S TSP YSP+SP+ Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S YSP+ P YSP+S +Y+P Sbjct: 61 YSPTSPKYSPTSPKYSPTS-PKYSP 84 [142][TOP] >UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba RepID=B4PY98_DROYA Length = 1889 Score = 105 bits (263), Expect = 2e-21 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776 Score = 104 bits (259), Expect = 6e-21 Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T Sbjct: 1667 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S Y+P Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744 Score = 90.5 bits (223), Expect = 8e-17 Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 7/88 (7%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPN 1625 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333 F+P STGYSPS GYSP+S Y+P N Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTPN 1652 Score = 90.1 bits (222), Expect = 1e-16 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462 +SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767 Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815 Score = 90.1 bits (222), Expect = 1e-16 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801 Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342 PSSPQ SPS TG YSPS YSP+S + YTP Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438 SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832 Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++P+ YSP+ P YSP++ S Y+P Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872 Score = 87.0 bits (214), Expect = 9e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1868 SHYSPTSPAYSPSS 1881 Score = 86.3 bits (212), Expect = 2e-15 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPSS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP Sbjct: 1633 YSPSSSGYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 1692 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1740 Score = 86.3 bits (212), Expect = 2e-15 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 ++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+ Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813 Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ YSPSST +Y+P Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843 Score = 77.4 bits (189), Expect = 7e-13 Identities = 56/149 (37%), Positives = 66/149 (44%), Gaps = 68/149 (45%) Frame = -2 Query: 578 FSPSSP-------------YSPTSPSYSPTSP---------------------------- 522 +SP+SP YSP+SP+YSPTSP Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSS 1638 Query: 521 SYSPTSP--------------------------SYSPSSPTYSPSSPYNSGTSPDYSPSS 420 YSPTSP +YSPSS YSP+SP S TSP YSPSS Sbjct: 1639 GYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSS 1698 Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 P +SP S YSP+ P YSP+S + YTP T Sbjct: 1699 PSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885 Query: 407 PS 402 S Sbjct: 1886 ES 1887 Score = 65.5 bits (158), Expect = 3e-09 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360 YSP+SP ++ S+ YSPS P YSP+S Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609 [143][TOP] >UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis RepID=B4H2R8_DROPE Length = 1804 Score = 105 bits (263), Expect = 2e-21 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 1614 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1673 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1674 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGS 1710 Score = 105 bits (262), Expect = 3e-21 Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T Sbjct: 1601 YSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1660 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S Y+P Sbjct: 1661 PSYSPTSPNYSAS--PHYSP 1678 Score = 95.5 bits (236), Expect = 3e-18 Identities = 53/97 (54%), Positives = 64/97 (65%), Gaps = 18/97 (18%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-- 408 +SPSSP YSPTSP YSPTSPSYSPTSP+Y+P++P+YSP+SP N SP YSP+SP +S Sbjct: 1628 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSP-NYSASPHYSPASPAYSQT 1686 Query: 407 -------------PSTGY--SPSQPGYSPSSTSQYTP 342 PS Y SP P Y+P S QY+P Sbjct: 1687 GAKYSPTSPTYSPPSPSYDGSPGSPQYTPGS-PQYSP 1722 Score = 90.1 bits (222), Expect = 1e-16 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426 +SP+SP YSP SP+YS T YSPTSP+YSP SP+Y SP SP + SP YSP Sbjct: 1663 YSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1722 Query: 425 SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 +SP++SP++ YSPS P +SPS +QY+P Sbjct: 1723 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1749 Score = 88.2 bits (217), Expect = 4e-16 Identities = 54/102 (52%), Positives = 62/102 (60%), Gaps = 21/102 (20%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTS--PS-----------------YSPSSPTYSPSSP 459 F+P S YSP++ YSPTSP YSPTS PS YSPSS YSP+SP Sbjct: 1560 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1619 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 S TSP YSPSSP +SP S YSP+ P YSP+S + YTP T Sbjct: 1620 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPAT 1660 Score = 87.0 bits (214), Expect = 9e-16 Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPS-SPYSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPS S YSPTSP YSPTS PS YSP+S +YSP+SP+YSP+SP Sbjct: 1567 YSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSP 1626 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SP S YSP+ P Y+P +T Y+P + + P Sbjct: 1627 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSPTSPNYSASP 1674 Score = 86.3 bits (212), Expect = 2e-15 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 ++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+ Sbjct: 1689 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1747 Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ YSPSST +Y+P Sbjct: 1748 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1777 Score = 84.0 bits (206), Expect = 8e-15 Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 7/85 (8%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQ 414 SPS SP SP Y+P SP YSP SP YSP+SP YSPSSP + S T YS +SP+ Sbjct: 1701 SPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1760 Query: 413 FSPSTG-YSPSQPGYSPSSTSQYTP 342 +SP+ YSPS YSP+S + YTP Sbjct: 1761 YSPNMSIYSPSSTKYSPTSPT-YTP 1784 Score = 81.3 bits (199), Expect = 5e-14 Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 8/89 (8%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS---- 408 S + P +P SPSYSPTSP+Y+ +SP +SP YSPSSP S TSP Y+ +SP+++ Sbjct: 1501 SMTPPMTPVSPSYSPTSPNYTASSPG--GASPNYSPSSPNYSPTSPLYAAASPRYASTTP 1558 Query: 407 ----PSTGYSPSQPGYSPSSTSQYTPKTN 333 STGYSPS GYSP+S Y+P +N Sbjct: 1559 NFNPQSTGYSPSASGYSPTS-PVYSPTSN 1586 Score = 75.9 bits (185), Expect = 2e-12 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 2/82 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSP+SP +SP S YSP+ TYS +SP S YSPSS ++SP Sbjct: 1719 QYSPASPKYSPTSPLYSPSSPQHSP-SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSP 1777 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S Y+P+ YSP+S Y+P Sbjct: 1778 TSPTYTPTARNYSPTSL-MYSP 1798 Score = 68.6 bits (166), Expect = 3e-10 Identities = 32/58 (55%), Positives = 41/58 (70%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+S +SP+ Sbjct: 1742 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSLMYSPT 1799 [144][TOP] >UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta RepID=B3NUC1_DROER Length = 1889 Score = 105 bits (263), Expect = 2e-21 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776 Score = 104 bits (260), Expect = 4e-21 Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP++ YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T Sbjct: 1667 YSPANAYSPSSANYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S Y+P Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744 Score = 90.1 bits (222), Expect = 1e-16 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462 +SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767 Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815 Score = 90.1 bits (222), Expect = 1e-16 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801 Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342 PSSPQ SPS TG YSPS YSP+S + YTP Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850 Score = 89.0 bits (219), Expect = 2e-16 Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 7/79 (8%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPN 1625 Query: 413 FSP-STGYSPSQPGYSPSS 360 F+P STGYSPS GYSP+S Sbjct: 1626 FNPQSTGYSPSSSGYSPTS 1644 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438 SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832 Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++P+ YSP+ P YSP++ S Y+P Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872 Score = 87.0 bits (214), Expect = 9e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1868 SHYSPTSPAYSPSS 1881 Score = 86.3 bits (212), Expect = 2e-15 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPT-----SPS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPSS YSPTSP YSPT SPS YSP+S +YSP+SP+YSP+SP Sbjct: 1633 YSPSSSGYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPANAYSPSSANYSPNSPSYSPTSP 1692 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1740 Score = 86.3 bits (212), Expect = 2e-15 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 ++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+ Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813 Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ YSPSST +Y+P Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843 Score = 77.4 bits (189), Expect = 7e-13 Identities = 56/149 (37%), Positives = 66/149 (44%), Gaps = 68/149 (45%) Frame = -2 Query: 578 FSPSSP-------------YSPTSPSYSPTSP---------------------------- 522 +SP+SP YSP+SP+YSPTSP Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSS 1638 Query: 521 SYSPTSP--------------------------SYSPSSPTYSPSSPYNSGTSPDYSPSS 420 YSPTSP +YSPSS YSP+SP S TSP YSPSS Sbjct: 1639 GYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPANAYSPSSANYSPNSPSYSPTSPSYSPSS 1698 Query: 419 PQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 P +SP S YSP+ P YSP+S + YTP T Sbjct: 1699 PSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885 Query: 407 PS 402 S Sbjct: 1886 ES 1887 Score = 65.5 bits (158), Expect = 3e-09 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360 YSP+SP ++ S+ YSPS P YSP+S Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609 [145][TOP] >UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae RepID=B3MQ29_DROAN Length = 1889 Score = 105 bits (263), Expect = 2e-21 Identities = 51/97 (52%), Positives = 68/97 (70%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776 Score = 104 bits (259), Expect = 6e-21 Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YSP SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T Sbjct: 1667 YSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S Y+P Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744 Score = 92.4 bits (228), Expect = 2e-17 Identities = 50/88 (56%), Positives = 64/88 (72%), Gaps = 7/88 (7%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + TSP Y+ ++P Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYATTSPRYASTTPN 1625 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333 F+P STGYSPS GYSP+S Y+P +N Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTSN 1652 Score = 90.1 bits (222), Expect = 1e-16 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462 +SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767 Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815 Score = 90.1 bits (222), Expect = 1e-16 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801 Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342 PSSPQ SPS TG YSPS YSP+S + YTP Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850 Score = 89.0 bits (219), Expect = 2e-16 Identities = 55/102 (53%), Positives = 62/102 (60%), Gaps = 21/102 (20%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTS-----PS--------------YSPSSPTYSPSSP 459 F+P S YSP+S YSPTSP YSPTS PS YSPSS YSP+SP Sbjct: 1626 FNPQSTGYSPSSSGYSPTSPVYSPTSNYQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSP 1685 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 S TSP YSPSSP +SP S YSP+ P YSP+S + YTP T Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438 SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832 Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++P+ YSP+ P YSP++ S Y+P Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872 Score = 87.0 bits (214), Expect = 9e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1868 SHYSPTSPAYSPSS 1881 Score = 86.3 bits (212), Expect = 2e-15 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 ++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+ Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813 Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ YSPSST +Y+P Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843 Score = 83.2 bits (204), Expect = 1e-14 Identities = 49/93 (52%), Positives = 58/93 (62%), Gaps = 14/93 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP-----SSP 417 +SPSSP YSPTSP Y+ TSP Y+ T+P+++P S YSPSS S TSP YSP SSP Sbjct: 1598 YSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQSSP 1657 Query: 416 QF--------SPSTGYSPSQPGYSPSSTSQYTP 342 F SP YSPS YSP+S S Y+P Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSSNYSPNSPS-YSP 1689 Score = 77.8 bits (190), Expect = 6e-13 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 13/92 (14%) Frame = -2 Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438 +SP+SP YSP+SP+YSPTSP Y+ TSP Y+ ++P ++P S S +S Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSS 1638 Query: 437 DYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342 YSP+SP +SP++ Y S P ++ S ++ Y+P Sbjct: 1639 GYSPTSPVYSPTSNYQ-SSPSFAGSGSNMYSP 1669 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885 Query: 407 PS 402 S Sbjct: 1886 ES 1887 Score = 65.5 bits (158), Expect = 3e-09 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360 YSP+SP ++ S+ YSPS P YSP+S Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609 [146][TOP] >UniRef100_Q84KP6 DNA-directed RNA polymerase n=1 Tax=Cyanidioschyzon merolae RepID=Q84KP6_CYAME Length = 1819 Score = 105 bits (261), Expect = 3e-21 Identities = 55/89 (61%), Positives = 68/89 (76%), Gaps = 8/89 (8%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +SP+SP SPTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S TSP YSP+SP +SP Sbjct: 1636 YSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1695 Query: 404 ST---GYSPSQP--GYSPSSTS-QYTPKT 336 S+ YSPS P YSPSS + Y+P + Sbjct: 1696 SSPNVAYSPSSPNVAYSPSSPNVAYSPSS 1724 Score = 86.3 bits (212), Expect = 2e-15 Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 10/90 (11%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSY--------SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 SP+ + T ++SP+SP+Y SPTSP+YSP+SP YSP+SP S TSP YSP+S Sbjct: 1617 SPAGGGTGTLGAFSPSSPAYSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1676 Query: 419 PQFSP-STGYSPSQPGYSPSSTS-QYTPKT 336 P +SP S YSP+ P YSPSS + Y+P + Sbjct: 1677 PAYSPTSPAYSPTSPAYSPSSPNVAYSPSS 1706 Score = 85.9 bits (211), Expect = 2e-15 Identities = 56/102 (54%), Positives = 66/102 (64%), Gaps = 21/102 (20%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYNSGTSPD---- 435 +SP+SP YSPTSP+YSPTSP+YSPTSP+YS P+SP YSPSSP N SP Sbjct: 1651 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSP-NVAYSPSSPNV 1709 Query: 434 -YSPSSPQF-----SPSTGYSPSQP--GYSPSSTS-QYTPKT 336 YSPSSP SP+ YSPS P YSPSS + Y+P + Sbjct: 1710 AYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSS 1751 Score = 83.2 bits (204), Expect = 1e-14 Identities = 56/116 (48%), Positives = 65/116 (56%), Gaps = 35/116 (30%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPS--------------------YSPSSP--TYSP 468 +SP+SP YSPTSP+YSPTSP+YSP+SP+ YSPSSP YSP Sbjct: 1672 YSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSP 1731 Query: 467 SSPYNSGTSPD-----YSPSSPQF-----SPSTGYSPSQP--GYSPSSTSQYTPKT 336 SSP N SP YSPSSP SP+ YSPS P YSPSS Y+P + Sbjct: 1732 SSP-NVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSS 1786 Score = 72.8 bits (177), Expect = 2e-11 Identities = 56/107 (52%), Positives = 68/107 (63%), Gaps = 27/107 (25%) Frame = -2 Query: 578 FSPSSP---YSPTSPS--YSPTSPS--YSPTSPS--YSPSSPT--YSPSSPY--NSGTSP 438 +SPSSP YSP+SP+ YSP+SP+ YSP+SP+ YSPSSP YSPSSP S +SP Sbjct: 1711 YSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSP 1770 Query: 437 D--YSPSSP----QFSPSTGYSPSQP--GYSPS------STSQYTPK 339 + YSPSSP SP+ YSPS P YSPS S+ Y+PK Sbjct: 1771 NVAYSPSSPVAYSPSSPNVAYSPSSPNVAYSPSSPAFSPSSPVYSPK 1817 Score = 69.3 bits (168), Expect = 2e-10 Identities = 49/87 (56%), Positives = 60/87 (68%), Gaps = 14/87 (16%) Frame = -2 Query: 578 FSPSSP---YSPTSPS--YSPTSPS--YSPTSPS--YSPSSPT-YSPSSPY--NSGTSPD 435 +SPSSP YSP+SP+ YSP+SP+ YSP+SP+ YSPSSP YSPSSP S +SP+ Sbjct: 1738 YSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSSPNVAYSPSSPN 1797 Query: 434 --YSPSSPQFSPSTGYSPSQPGYSPSS 360 YSPSSP FSPS+ P YSP + Sbjct: 1798 VAYSPSSPAFSPSS------PVYSPKN 1818 Score = 54.7 bits (130), Expect = 5e-06 Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 9/85 (10%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 +SP++ S S S T+P+++P T ++SPSSP YSP+SP SP+SP Sbjct: 1599 TSPFA--SFSASATTPNWAPSPAGGGTGTLGAFSPSSPAYSPTSPRL------VSPTSPA 1650 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S YSP+ P YSP+S + Y+P Sbjct: 1651 YSPTSPAYSPTSPAYSPTSPA-YSP 1674 [147][TOP] >UniRef100_C6HNU4 DNA-directed RNA polymerase II n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HNU4_AJECH Length = 668 Score = 105 bits (261), Expect = 3e-21 Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 12/99 (12%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SPS SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP STG Sbjct: 545 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 604 Query: 395 ------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 Y+P+ PG+SP+S Y+P + + P Sbjct: 605 RHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 643 Score = 92.4 bits (228), Expect = 2e-17 Identities = 49/96 (51%), Positives = 66/96 (68%), Gaps = 16/96 (16%) Frame = -2 Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSG 447 R+SPSS YSPTSP +SP SP+++PTSP+YSP+SP+Y SP+SP S Sbjct: 500 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSP 559 Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 TSP +SP+SP +SP S +SP+ P +SP+S S Y+P Sbjct: 560 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 594 Score = 89.0 bits (219), Expect = 2e-16 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456 FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP Sbjct: 564 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPG 623 Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360 S TSP+ YSP+SP F SP++ P+ PGYSP+S Sbjct: 624 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 658 Score = 86.7 bits (213), Expect = 1e-15 Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 36/112 (32%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPD 435 +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP S TSP Sbjct: 557 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK 616 Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351 Y+P+SP +SP S GYSP+ P ++P S Q Sbjct: 617 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 668 Score = 66.6 bits (161), Expect = 1e-09 Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 2/84 (2%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP SP YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP Sbjct: 474 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 530 Query: 404 STGYSPSQPGYSPSSTSQYTPKTN 333 S ++P+ P YSP+S S T+ Sbjct: 531 SPAFAPTSPAYSPTSPSYQQSPTS 554 Score = 55.5 bits (132), Expect = 3e-06 Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 10/51 (19%) Frame = -2 Query: 581 RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSP 459 +++P+SP +SPTSP +YSPTSP++S PTSP YSP+SPT++P SP Sbjct: 616 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISP 666 [148][TOP] >UniRef100_C1GHL1 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb18 RepID=C1GHL1_PARBD Length = 1746 Score = 105 bits (261), Expect = 3e-21 Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 15/103 (14%) Frame = -2 Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP Sbjct: 1620 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1679 Query: 407 PSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 STG Y+P+ PG+SP+S Y+P + + P Sbjct: 1680 GSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1722 Score = 90.1 bits (222), Expect = 1e-16 Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 23/97 (23%) Frame = -2 Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSY---------SPSSPTYSP 468 R+SPSS YSPTSP +SP SP ++PTSP+Y SP+SP+YSP Sbjct: 1579 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSP 1638 Query: 467 SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360 +SP S TSP YSP+SP FSP S +SP+ P YSP+S Sbjct: 1639 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1675 Score = 89.0 bits (219), Expect = 2e-16 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456 FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP Sbjct: 1643 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPG 1702 Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360 S TSP+ YSP+SP F SP++ P+ PGYSP+S Sbjct: 1703 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1737 Score = 88.2 bits (217), Expect = 4e-16 Identities = 49/109 (44%), Positives = 64/109 (58%), Gaps = 36/109 (33%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435 +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP G TSP Sbjct: 1636 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPK 1695 Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPSS 360 Y+P+SP +SP S GYSP+ P +SP+S Sbjct: 1696 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTS 1744 Score = 81.6 bits (200), Expect = 4e-14 Identities = 51/90 (56%), Positives = 62/90 (68%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGTSPDYSPS 423 +SPSSP+ SPTSP YSP+S YSPTSP S SSP +SP+SP + TSP YSP+ Sbjct: 1565 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPT 1623 Query: 422 SP--QFSP-STGYSPSQPGYSPSSTSQYTP 342 SP Q SP S YSP+ PG+SP+S S Y+P Sbjct: 1624 SPGYQQSPTSPSYSPTSPGFSPTSPS-YSP 1652 Score = 66.2 bits (160), Expect = 2e-09 Identities = 34/59 (57%), Positives = 42/59 (71%), Gaps = 9/59 (15%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYS--------PSSPYNSGTSPDYSPSSP 417 SP SPTSP Y+PTSP +SPTSP +YSP+SP +S P+SP S TSP +SP+SP Sbjct: 1687 SPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTSP 1745 Score = 63.9 bits (154), Expect = 9e-09 Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 FSP SP YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP+ Sbjct: 1553 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1609 Query: 401 TG-YSPSQPGYSPSS 360 + ++P+ P YSP+S Sbjct: 1610 SPVFAPTSPAYSPTS 1624 Score = 59.7 bits (143), Expect = 2e-07 Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 10/56 (17%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSP-SYSPTSPSYS--------PSSPTYSPSSPYNSGTSP 438 SP+SP Y+PTSP +SPTSP +YSPTSP++S P+SP YSP+SP S TSP Sbjct: 1690 SPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTSP 1745 Score = 58.5 bits (140), Expect = 4e-07 Identities = 29/52 (55%), Positives = 41/52 (78%), Gaps = 10/52 (19%) Frame = -2 Query: 581 RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSPY 456 +++P+SP +SPTSP +YSPTSP++S PTSP YSP+SPT+SP+SP+ Sbjct: 1695 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTSPH 1746 [149][TOP] >UniRef100_C0SE75 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SE75_PARBP Length = 2106 Score = 105 bits (261), Expect = 3e-21 Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 15/103 (14%) Frame = -2 Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP Sbjct: 1620 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1679 Query: 407 PSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 STG Y+P+ PG+SP+S Y+P + + P Sbjct: 1680 GSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1722 Score = 90.1 bits (222), Expect = 1e-16 Identities = 49/97 (50%), Positives = 61/97 (62%), Gaps = 23/97 (23%) Frame = -2 Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSY---------SPSSPTYSP 468 R+SPSS YSPTSP +SP SP ++PTSP+Y SP+SP+YSP Sbjct: 1579 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSP 1638 Query: 467 SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360 +SP S TSP YSP+SP FSP S +SP+ P YSP+S Sbjct: 1639 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1675 Score = 89.0 bits (219), Expect = 2e-16 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456 FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP Sbjct: 1643 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPG 1702 Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360 S TSP+ YSP+SP F SP++ P+ PGYSP+S Sbjct: 1703 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1737 Score = 86.7 bits (213), Expect = 1e-15 Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 36/108 (33%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435 +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP G TSP Sbjct: 1636 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPK 1695 Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPS 363 Y+P+SP +SP S GYSP+ P +SP+ Sbjct: 1696 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPT 1743 Score = 81.6 bits (200), Expect = 4e-14 Identities = 51/90 (56%), Positives = 62/90 (68%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGTSPDYSPS 423 +SPSSP+ SPTSP YSP+S YSPTSP S SSP +SP+SP + TSP YSP+ Sbjct: 1565 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPT 1623 Query: 422 SP--QFSP-STGYSPSQPGYSPSSTSQYTP 342 SP Q SP S YSP+ PG+SP+S S Y+P Sbjct: 1624 SPGYQQSPTSPSYSPTSPGFSPTSPS-YSP 1652 Score = 63.9 bits (154), Expect = 9e-09 Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 FSP SP YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP+ Sbjct: 1553 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1609 Query: 401 TG-YSPSQPGYSPSS 360 + ++P+ P YSP+S Sbjct: 1610 SPVFAPTSPAYSPTS 1624 [150][TOP] >UniRef100_C0NEY2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0NEY2_AJECG Length = 1234 Score = 105 bits (261), Expect = 3e-21 Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 12/99 (12%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SPS SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP STG Sbjct: 1111 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 1170 Query: 395 ------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 Y+P+ PG+SP+S Y+P + + P Sbjct: 1171 RHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1209 Score = 92.4 bits (228), Expect = 2e-17 Identities = 49/96 (51%), Positives = 66/96 (68%), Gaps = 16/96 (16%) Frame = -2 Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSG 447 R+SPSS YSPTSP +SP SP+++PTSP+YSP+SP+Y SP+SP S Sbjct: 1066 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSP 1125 Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 TSP +SP+SP +SP S +SP+ P +SP+S S Y+P Sbjct: 1126 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 1160 Score = 89.0 bits (219), Expect = 2e-16 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456 FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP Sbjct: 1130 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPG 1189 Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360 S TSP+ YSP+SP F SP++ P+ PGYSP+S Sbjct: 1190 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1224 Score = 86.7 bits (213), Expect = 1e-15 Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 36/112 (32%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPD 435 +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP S TSP Sbjct: 1123 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK 1182 Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351 Y+P+SP +SP S GYSP+ P ++P S Q Sbjct: 1183 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 1234 Score = 66.6 bits (161), Expect = 1e-09 Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 2/84 (2%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP SP YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP Sbjct: 1040 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1096 Query: 404 STGYSPSQPGYSPSSTSQYTPKTN 333 S ++P+ P YSP+S S T+ Sbjct: 1097 SPAFAPTSPAYSPTSPSYQQSPTS 1120 Score = 55.5 bits (132), Expect = 3e-06 Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 10/51 (19%) Frame = -2 Query: 581 RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSP 459 +++P+SP +SPTSP +YSPTSP++S PTSP YSP+SPT++P SP Sbjct: 1182 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISP 1232 [151][TOP] >UniRef100_A6QYA7 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6QYA7_AJECN Length = 1747 Score = 105 bits (261), Expect = 3e-21 Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 12/99 (12%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SPS SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP STG Sbjct: 1624 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 1683 Query: 395 ------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 Y+P+ PG+SP+S Y+P + + P Sbjct: 1684 RHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1722 Score = 92.4 bits (228), Expect = 2e-17 Identities = 49/96 (51%), Positives = 66/96 (68%), Gaps = 16/96 (16%) Frame = -2 Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSG 447 R+SPSS YSPTSP +SP SP+++PTSP+YSP+SP+Y SP+SP S Sbjct: 1579 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSP 1638 Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 TSP +SP+SP +SP S +SP+ P +SP+S S Y+P Sbjct: 1639 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPS-YSP 1673 Score = 89.0 bits (219), Expect = 2e-16 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456 FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP Sbjct: 1643 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPG 1702 Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360 S TSP+ YSP+SP F SP++ P+ PGYSP+S Sbjct: 1703 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1737 Score = 86.7 bits (213), Expect = 1e-15 Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 36/112 (32%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPD 435 +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP S TSP Sbjct: 1636 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK 1695 Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351 Y+P+SP +SP S GYSP+ P ++P S Q Sbjct: 1696 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 1747 Score = 66.6 bits (161), Expect = 1e-09 Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 2/84 (2%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP SP YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP Sbjct: 1553 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1609 Query: 404 STGYSPSQPGYSPSSTSQYTPKTN 333 S ++P+ P YSP+S S T+ Sbjct: 1610 SPAFAPTSPAYSPTSPSYQQSPTS 1633 Score = 55.5 bits (132), Expect = 3e-06 Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 10/51 (19%) Frame = -2 Query: 581 RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSP 459 +++P+SP +SPTSP +YSPTSP++S PTSP YSP+SPT++P SP Sbjct: 1695 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISP 1745 [152][TOP] >UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni RepID=B4NDK9_DROWI Length = 1890 Score = 104 bits (260), Expect = 4e-21 Identities = 50/97 (51%), Positives = 68/97 (70%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 ++P+SP YSPTSPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 1681 YTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1740 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1741 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1777 Score = 103 bits (256), Expect = 1e-20 Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +Y+P SPSYSPTSPSYSPSSP+YSP+SP S TSP YSP+SP ++P T Sbjct: 1668 YSPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1727 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S Y+P Sbjct: 1728 PSYSPTSPNYSAS--PHYSP 1745 Score = 90.1 bits (222), Expect = 1e-16 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462 +SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S Sbjct: 1709 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1768 Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P Sbjct: 1769 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1816 Score = 90.1 bits (222), Expect = 1e-16 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS Sbjct: 1743 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1802 Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342 PSSPQ SPS TG YSPS YSP+S + YTP Sbjct: 1803 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1851 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438 SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP Sbjct: 1774 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1833 Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++P+ YSP+ P YSP++ S Y+P Sbjct: 1834 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1873 Score = 87.0 bits (214), Expect = 9e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ Sbjct: 1809 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1868 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1869 SHYSPTSPAYSPSS 1882 Score = 86.3 bits (212), Expect = 2e-15 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 ++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+ Sbjct: 1756 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1814 Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ YSPSST +Y+P Sbjct: 1815 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1844 Score = 85.9 bits (211), Expect = 2e-15 Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 14/92 (15%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPT-------------SPSYSPSSPTYSPSSPYNSGTSPDYSP 426 SPY PTSPS SPSYSPT SP+YSPSSP YSP+SP + TSP Y+ Sbjct: 1566 SPYFPTSPS---VSPSYSPTSPNYTASSPSGGASPNYSPSSPNYSPTSPLYAATSPRYAS 1622 Query: 425 SSPQFS-PSTGYSPSQPGYSPSSTSQYTPKTN 333 ++P F+ STGYSPS GYSP+S Y+P +N Sbjct: 1623 TTPNFNLQSTGYSPSSSGYSPTS-PVYSPTSN 1653 Score = 85.1 bits (209), Expect = 4e-15 Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPSS YSPTSP YSPTS PS YSP+S +Y+P+SP+YSP+SP Sbjct: 1634 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSP 1693 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P Sbjct: 1694 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1741 Score = 84.3 bits (207), Expect = 6e-15 Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 10/98 (10%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPS------YSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 S S YSPTSP+Y+ +SPS YSP+SP+YSP+SP Y+ +SP + T+P+++ S Sbjct: 1574 SVSPSYSPTSPNYTASSPSGGASPNYSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTG 1633 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPK---TNDNKDDPG 312 +SP S+GYSP+ P YSP+S Q +P + N PG Sbjct: 1634 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPG 1671 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F Sbjct: 1827 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1886 Query: 407 PS 402 S Sbjct: 1887 ES 1888 Score = 75.9 bits (185), Expect = 2e-12 Identities = 52/133 (39%), Positives = 61/133 (45%), Gaps = 55/133 (41%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSP----------------------------SYSPTSP--------- 501 S YSP+SP+YSPTSP YSPTSP Sbjct: 1596 SPNYSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSSSGYSPTSPVYSPTSNFQ 1655 Query: 500 -----------------SYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPG 375 +YSPSS Y+P+SP S TSP YSPSSP +SP S YSP+ P Sbjct: 1656 SSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPS 1715 Query: 374 YSPSSTSQYTPKT 336 YSP+S + YTP T Sbjct: 1716 YSPTSPN-YTPVT 1727 [153][TOP] >UniRef100_C5GKA7 DNA-directed RNA polymerase n=2 Tax=Ajellomyces dermatitidis RepID=C5GKA7_AJEDR Length = 1746 Score = 104 bits (260), Expect = 4e-21 Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 15/103 (14%) Frame = -2 Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP Sbjct: 1619 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1678 Query: 407 PSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 STG Y+P+ PG+SP+S Y+P + + P Sbjct: 1679 ISTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1721 Score = 91.3 bits (225), Expect = 5e-17 Identities = 49/97 (50%), Positives = 62/97 (63%), Gaps = 23/97 (23%) Frame = -2 Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSY---------SPSSPTYSP 468 R+SPSS YSPTSP +SP SP+++PTSP+Y SP+SP+YSP Sbjct: 1578 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPGYQQSPTSPSYSP 1637 Query: 467 SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360 +SP S TSP YSP+SP FSP S +SP+ P YSP+S Sbjct: 1638 TSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTS 1674 Score = 89.0 bits (219), Expect = 2e-16 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456 FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP Sbjct: 1642 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGISTGRHLSPTSPTSPKYTPTSPG 1701 Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360 S TSP+ YSP+SP F SP++ P+ PGYSP+S Sbjct: 1702 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1736 Score = 87.8 bits (216), Expect = 6e-16 Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 36/112 (32%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-----------NSGTSPD 435 +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP S TSP Sbjct: 1635 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGISTGRHLSPTSPTSPK 1694 Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351 Y+P+SP +SP S GYSP+ P ++P+S Q Sbjct: 1695 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1746 Score = 80.1 bits (196), Expect = 1e-13 Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPTSPSYS------PSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP+ SPTSP YSP+S YSPTSP S SSP +SP+SP + TSP YSP+ Sbjct: 1564 YSPTSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPT 1622 Query: 422 SP--QFSP-STGYSPSQPGYSPSSTSQYTP 342 SP Q SP S YSP+ PG+SP+S S Y+P Sbjct: 1623 SPGYQQSPTSPSYSPTSPGFSPTSPS-YSP 1651 Score = 66.6 bits (161), Expect = 1e-09 Identities = 43/75 (57%), Positives = 50/75 (66%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP SP YSPTSP + SPTSP YSPSS YSP+SP S TSP + SSP FSP Sbjct: 1552 FSPHGARSPGG-GYSPTSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1608 Query: 404 STGYSPSQPGYSPSS 360 S ++P+ P YSP+S Sbjct: 1609 SPAFAPTSPAYSPTS 1623 Score = 56.6 bits (135), Expect = 1e-06 Identities = 28/51 (54%), Positives = 40/51 (78%), Gaps = 10/51 (19%) Frame = -2 Query: 581 RFSPSSP-YSPTSP-SYSPTSPSYS--------PTSPSYSPSSPTYSPSSP 459 +++P+SP +SPTSP +YSPTSP++S PTSP YSP+SPT++P+SP Sbjct: 1694 KYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPTSP 1744 [154][TOP] >UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi RepID=B4JXA6_DROGR Length = 1889 Score = 104 bits (259), Expect = 6e-21 Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSP SPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 1680 YSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSAS 1739 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776 Score = 99.4 bits (246), Expect = 2e-19 Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YSP SPSYSP SPSYSPSSP+YSP+SP S TSP YSP+SP+++ T Sbjct: 1667 YSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVT 1726 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S Y+P Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744 Score = 90.1 bits (222), Expect = 1e-16 Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + TSP Y+ ++P Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSPRYASATPN 1625 Query: 413 F-SPSTGYSPSQPGYSPSSTSQYTPKTN 333 F + STGYSPS GYSP+S Y+P +N Sbjct: 1626 FNAQSTGYSPSSSGYSPTS-PVYSPTSN 1652 Score = 90.1 bits (222), Expect = 1e-16 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801 Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342 PSSPQ SPS TG YSPS YSP+S + YTP Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850 Score = 89.7 bits (221), Expect = 1e-16 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSP-------YSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSP 426 +SP+SP YSP SP+YS T YSPTSP+YSP SP+Y SP SP + SP YSP Sbjct: 1729 YSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1788 Query: 425 SSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 +SP++SP++ YSPS P +SPS +QY+P Sbjct: 1789 ASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815 Score = 89.4 bits (220), Expect = 2e-16 Identities = 51/103 (49%), Positives = 61/103 (59%), Gaps = 24/103 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG--------------- 447 +SPSSP YSPTSP YSPTSPSYSPTSP Y+ +P+YSP+SP S Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSASPHYSPASPAYSQTG 1753 Query: 446 -----TSPDYSPSSPQFSPSTG---YSPSQPGYSPSSTSQYTP 342 TSP YSP SP + S G Y+P P YSP+S +Y+P Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPAS-PKYSP 1795 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438 SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832 Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++P+ YSP+ P YSP++ S Y+P Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872 Score = 87.0 bits (214), Expect = 9e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1868 SHYSPTSPAYSPSS 1881 Score = 86.3 bits (212), Expect = 2e-15 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 ++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+ Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813 Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ YSPSST +Y+P Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843 Score = 82.4 bits (202), Expect = 2e-14 Identities = 51/109 (46%), Positives = 65/109 (59%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPSS YSPTSP YSPTS PS YSP+S +YSP+SP+YSP SP Sbjct: 1633 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNLYSPGNAYSPSSSNYSPNSPSYSPMSP 1692 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SP S YSP+ P Y+ + T Y+P + + P Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPKYT-AVTPSYSPTSPNYSASP 1740 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885 Query: 407 PS 402 S Sbjct: 1886 ES 1887 Score = 75.9 bits (185), Expect = 2e-12 Identities = 50/112 (44%), Positives = 60/112 (53%), Gaps = 33/112 (29%) Frame = -2 Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPT-------YSPSSP 459 +SP+SP YSP+SP+YSPTSP Y+ TSP Y+ ++P YSPSS Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSS 1638 Query: 458 YNSGTSPDYSP-----SSPQF--------SPSTGYSPSQPGYSPSSTSQYTP 342 S TSP YSP SSP F SP YSPS YSP+S S Y+P Sbjct: 1639 GYSPTSPVYSPTSNFQSSPSFAGSGSNLYSPGNAYSPSSSNYSPNSPS-YSP 1689 Score = 65.5 bits (158), Expect = 3e-09 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 1518 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360 YSP+SP ++ S+ YSPS P YSP+S Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609 [155][TOP] >UniRef100_C1H3Q4 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1H3Q4_PARBA Length = 1748 Score = 103 bits (258), Expect = 7e-21 Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%) Frame = -2 Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP Sbjct: 1625 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1684 Query: 407 PSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 STG Y+P+ PG+SP+S Y+P + + P Sbjct: 1685 GSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSP 1727 Score = 90.5 bits (223), Expect = 8e-17 Identities = 49/97 (50%), Positives = 62/97 (63%), Gaps = 23/97 (23%) Frame = -2 Query: 581 RFSPSSPYSPTSPS-------------YSPTSPSYSPTSPSY---------SPSSPTYSP 468 R+SPSS YSPTSP +SP SP ++PTSP+Y SP+SP+YSP Sbjct: 1584 RYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSP 1643 Query: 467 SSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360 +SP S TSP+YSP+SP FSP S +SP+ P YSP+S Sbjct: 1644 TSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1680 Score = 89.0 bits (219), Expect = 2e-16 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456 FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP Sbjct: 1648 FSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPG 1707 Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360 S TSP+ YSP+SP F SP++ P+ PGYSP+S Sbjct: 1708 WSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1742 Score = 83.2 bits (204), Expect = 1e-14 Identities = 48/93 (51%), Positives = 61/93 (65%), Gaps = 18/93 (19%) Frame = -2 Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPT-------------SPSYSPSSPTYSPSSPYNSGT 444 +SPSSP+ SPTSP YSP+S YSPT SP +SP+SP ++P+SP S T Sbjct: 1570 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPT 1628 Query: 443 SPDY--SPSSPQFSP-STGYSPSQPGYSPSSTS 354 SP Y SP+SP +SP S G+SP+ P YSP+S S Sbjct: 1629 SPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPS 1661 Score = 75.5 bits (184), Expect = 3e-12 Identities = 45/87 (51%), Positives = 54/87 (62%), Gaps = 28/87 (32%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPS------------------YSPTSPSYSPSSP-TYSPSSP 459 FSP+SP +SPTSPSYSPTSP+ Y+PTSP +SP+SP TYSP+SP Sbjct: 1662 FSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSP 1721 Query: 458 YNSG--------TSPDYSPSSPQFSPS 402 SG TSP YSP+SP FSP+ Sbjct: 1722 NFSGSPTSPGGPTSPGYSPTSPTFSPT 1748 Score = 63.9 bits (154), Expect = 9e-09 Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 FSP SP YSP+SP + SPTSP YSPSS YSP+SP S TSP + SSP FSP+ Sbjct: 1558 FSPHGARSPGG-GYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFM-SSPGFSPA 1614 Query: 401 TG-YSPSQPGYSPSS 360 + ++P+ P YSP+S Sbjct: 1615 SPVFAPTSPAYSPTS 1629 [156][TOP] >UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A92 Length = 1714 Score = 103 bits (257), Expect = 1e-20 Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GTSPDYSPS 423 + P SP Y+P SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+ Sbjct: 1577 YEPRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPT 1636 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP +SP S YSP+ P YSP+S + YTP Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPTSPN-YTP 1663 Score = 101 bits (252), Expect = 4e-20 Identities = 54/99 (54%), Positives = 66/99 (66%), Gaps = 20/99 (20%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-------------------- 459 +SP+SP PTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP Sbjct: 1620 YSPTSPSGPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPPHQLVPTSPYTPHISV 1679 Query: 458 YNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342 Y+ TSP YSP+SP+ S YSP+ PGYSP+S + Y+P Sbjct: 1680 YSPPTSPTYSPTSPKGST---YSPTSPGYSPTSPT-YSP 1714 Score = 100 bits (249), Expect = 8e-20 Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 13/92 (14%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSS 420 +SP+SP YSPTSPSYSPTSPSYSPTSPS YSP+SP+YSP+SP S TSP YSP+S Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1658 Query: 419 PQFS------PSTGYSPSQPGYSPSSTSQYTP 342 P ++ P++ Y+P YSP ++ Y+P Sbjct: 1659 PNYTPPHQLVPTSPYTPHISVYSPPTSPTYSP 1690 Score = 94.4 bits (233), Expect = 6e-18 Identities = 51/97 (52%), Positives = 62/97 (63%), Gaps = 20/97 (20%) Frame = -2 Query: 572 PSSPYSPT-----SPSYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYN 453 P+SPY P+ SP+YSPTSP+ YSPTSPSYSP+SP+YSP+SP Sbjct: 1554 PASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPSY 1613 Query: 452 SGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP S YSP+ P YSP+S S Y+P Sbjct: 1614 SPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPS-YSP 1649 Score = 61.2 bits (147), Expect = 6e-08 Identities = 42/87 (48%), Positives = 52/87 (59%), Gaps = 8/87 (9%) Frame = -2 Query: 578 FSPS--SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY----NSGTSPDYSPSSP 417 FSPS S S SP YSP ++SPT S P SP P+SPY SP+YSP+SP Sbjct: 1523 FSPSAASDASGFSPGYSP---AWSPTPGS--PGSP--GPASPYIPSPGGAMSPNYSPTSP 1575 Query: 416 QFSPST--GYSPSQPGYSPSSTSQYTP 342 + P + GY+P PGYSP+S S Y+P Sbjct: 1576 AYEPRSPGGYTPQSPGYSPTSPS-YSP 1601 [157][TOP] >UniRef100_O77165 DNA-directed RNA polymerase (Fragment) n=1 Tax=Breviata anathema RepID=O77165_9EUKA Length = 1690 Score = 103 bits (257), Expect = 1e-20 Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP Sbjct: 1506 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1565 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1566 SPAYSPASPAYSPASPA-YSP 1585 Score = 103 bits (257), Expect = 1e-20 Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP Sbjct: 1527 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1586 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1587 SPAYSPASPAYSPASPA-YSP 1606 Score = 103 bits (257), Expect = 1e-20 Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP Sbjct: 1548 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1607 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1608 SPAYSPASPAYSPASPA-YSP 1627 Score = 103 bits (257), Expect = 1e-20 Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP Sbjct: 1569 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1628 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1629 SPAYSPASPAYSPASPA-YSP 1648 Score = 102 bits (253), Expect = 3e-20 Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP Sbjct: 1590 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1649 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S Y P+ P YSP+S + Y+P Sbjct: 1650 SPAYGPASPAYSPASPA-YSP 1669 Score = 102 bits (253), Expect = 3e-20 Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP + P Sbjct: 1597 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPA 1656 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1657 SPAYSPASPAYSPASPA-YSP 1676 Score = 101 bits (251), Expect = 5e-20 Identities = 49/81 (60%), Positives = 61/81 (75%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP S SP Y P+SP +SP Sbjct: 1604 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPA 1663 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y P Sbjct: 1664 SPAYSPASPAYSPASPA-YDP 1683 Score = 97.8 bits (242), Expect = 5e-19 Identities = 45/74 (60%), Positives = 56/74 (75%), Gaps = 2/74 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +SP+SP YSP SP+YSP SP+YSP SP+YSP+SP YSP+SP SP YSP+SP +SP Sbjct: 1611 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPA 1670 Query: 404 STGYSPSQPGYSPS 363 S YSP+ P Y P+ Sbjct: 1671 SPAYSPASPAYDPA 1684 Score = 92.4 bits (228), Expect = 2e-17 Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 1/75 (1%) Frame = -2 Query: 563 PYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSP 387 P SP + YSP SP+YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP S YSP Sbjct: 1498 PGSPAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSP 1557 Query: 386 SQPGYSPSSTSQYTP 342 + P YSP+S + Y+P Sbjct: 1558 ASPAYSPASPA-YSP 1571 Score = 85.9 bits (211), Expect = 2e-15 Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 1/63 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSP SP+YSP SP+YSP SP+Y P+SP YSP+SP S SP YSP+SP + P+ Sbjct: 1625 YSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPA 1684 Query: 401 TGY 393 Y Sbjct: 1685 EPY 1687 Score = 80.5 bits (197), Expect = 9e-14 Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 5/82 (6%) Frame = -2 Query: 572 PSSP----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 PSSP Y P S P + YSP SP+YSP+SP YSP+SP S SP YSP+SP +SP Sbjct: 1486 PSSPGPFGYIPVPGS--PAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSP 1543 Query: 404 -STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P YSP+S + Y+P Sbjct: 1544 ASPAYSPASPAYSPASPA-YSP 1564 Score = 66.2 bits (160), Expect = 2e-09 Identities = 27/43 (62%), Positives = 35/43 (81%), Gaps = 1/43 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN 453 +SP+SP Y P SP+YSP SP+YSP SP+YSP+SP Y P+ PY+ Sbjct: 1646 YSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPAEPYD 1688 [158][TOP] >UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis RepID=B4L732_DROMO Length = 1889 Score = 103 bits (257), Expect = 1e-20 Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSP SPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 1680 YSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776 Score = 102 bits (253), Expect = 3e-20 Identities = 49/80 (61%), Positives = 60/80 (75%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YSP SPSYSP SPSYSPSSP+YSP+SP S TSP YSP+SP ++P T Sbjct: 1667 YSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVT 1726 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S Y+P Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744 Score = 93.2 bits (230), Expect = 1e-17 Identities = 50/88 (56%), Positives = 64/88 (72%), Gaps = 7/88 (7%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + TSP Y+ ++P Sbjct: 1566 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASTSPRYASTTPN 1625 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333 F+P STGYSPS GYSP+S Y+P +N Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTSN 1652 Score = 90.1 bits (222), Expect = 1e-16 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462 +SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S Sbjct: 1708 YSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767 Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPS--NQYSP 1815 Score = 90.1 bits (222), Expect = 1e-16 Identities = 57/110 (51%), Positives = 64/110 (58%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SP+SP YSPTSP+YSP SPSY SP SP Y+P SP YSP+SP S TSP YS Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801 Query: 428 PSSPQFSPS-----TG----------------YSPSQPGYSPSSTSQYTP 342 PSSPQ SPS TG YSPS YSP+S + YTP Sbjct: 1802 PSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPT-YTP 1850 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438 SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y+ S TSP Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832 Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++P+ YSP+ P YSP++ S Y+P Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872 Score = 87.0 bits (214), Expect = 9e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1868 SHYSPTSPAYSPSS 1881 Score = 86.7 bits (213), Expect = 1e-15 Identities = 54/102 (52%), Positives = 61/102 (59%), Gaps = 21/102 (20%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPT-----SPS--------------YSPSSPTYSPSSP 459 F+P S YSP+S YSPTSP YSPT SPS YSPSS YSP+SP Sbjct: 1626 FNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSP 1685 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 S SP YSPSSP +SP S YSP+ P YSP+S + YTP T Sbjct: 1686 SYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN-YTPVT 1726 Score = 86.3 bits (212), Expect = 2e-15 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 ++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+ Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-QY 1813 Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ YSPSST +Y+P Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843 Score = 85.5 bits (210), Expect = 3e-15 Identities = 52/109 (47%), Positives = 65/109 (59%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTS-----PS--------------YSPTSPSYSPSSPTYSPSSP 459 +SPSS YSPTSP YSPTS PS YSP+S +YSP+SP+YSP SP Sbjct: 1633 YSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPMSP 1692 Query: 458 YNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S +SP YSP+SP +SP S YSP+ P Y+P T Y+P + + P Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSPTSPNYSASP 1740 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885 Query: 407 PS 402 S Sbjct: 1886 ES 1887 Score = 76.3 bits (186), Expect = 2e-12 Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 13/92 (14%) Frame = -2 Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSP 438 +SP+SP YSP+SP+YSPTSP Y+ TSP Y+ ++P ++P S S +S Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASTSPRYASTTPNFNPQSTGYSPSSS 1638 Query: 437 DYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342 YSP+SP +SP++ + S P ++ S ++ Y+P Sbjct: 1639 GYSPTSPVYSPTSNFQ-SSPSFAGSGSNMYSP 1669 Score = 67.4 bits (163), Expect = 8e-10 Identities = 41/92 (44%), Positives = 52/92 (56%), Gaps = 19/92 (20%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSPS S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 1518 FSPSGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360 YSP+SP ++ S+ YSPS P YSP+S Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609 [159][TOP] >UniRef100_C6F1F2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi RepID=C6F1F2_9APIC Length = 232 Score = 103 bits (256), Expect = 1e-20 Identities = 51/83 (61%), Positives = 61/83 (73%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +S +SP YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP S TSP YSP+SP++SP Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 115 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S YSP+ P YSP+S P + Sbjct: 116 SPKYSPTSPQYSPTSPVPNNPSS 138 Score = 102 bits (254), Expect = 2e-20 Identities = 49/75 (65%), Positives = 59/75 (78%), Gaps = 3/75 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP Y PTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 69 KYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSP 128 Query: 404 STGY--SPSQPGYSP 366 ++ +PS P YSP Sbjct: 129 TSPVPNNPSSPHYSP 143 Score = 100 bits (248), Expect = 1e-19 Identities = 50/77 (64%), Positives = 58/77 (75%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S TSP YSP+SP++SP S Y Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S QY+P Sbjct: 113 SPTSPKYSPTS-PQYSP 128 Score = 90.5 bits (223), Expect = 8e-17 Identities = 49/94 (52%), Positives = 61/94 (64%), Gaps = 15/94 (15%) Frame = -2 Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 +SP+SP +S SP YS TSP YSPTSP YSP+SP Y P+SP S TS Sbjct: 29 YSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTS 88 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SP++SP S YSP+ P YSP+S +Y+P Sbjct: 89 PKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 121 Score = 81.6 bits (200), Expect = 4e-14 Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP P++P +SP YSP +SP+ Sbjct: 97 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPV--PNNP----SSPHYSPYAIASPK 150 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 FSP S YS S P Y S ++ Sbjct: 151 FSPTSPAYSISSPVYDQSGNAR 172 Score = 60.1 bits (144), Expect = 1e-07 Identities = 43/114 (37%), Positives = 53/114 (46%), Gaps = 25/114 (21%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSP------------------SYSPSSPTYSPSSP 459 ++SP+SP YSPTSP YSPTSP YSPTSP +SP+SP YS SSP Sbjct: 104 KYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSP 163 Query: 458 YNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTPKTNDN-----KDDP 315 + + S SP+ SP Q S ++P N DDP Sbjct: 164 VYDQSGNARNKSQHPLSPAYILQSPVQVKQHIQDVSVFSPIQQANAEGAQNDDP 217 [160][TOP] >UniRef100_Q1E2G9 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis RepID=Q1E2G9_COCIM Length = 1750 Score = 102 bits (255), Expect = 2e-20 Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 17/105 (16%) Frame = -2 Query: 578 FSPSSP-----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 +SP+SP SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP Sbjct: 1621 YSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPA 1680 Query: 413 FSPSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 +TG Y+P+ PG+SP+S Y+P + + P Sbjct: 1681 LGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFAGSP 1725 Score = 95.5 bits (236), Expect = 3e-18 Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 5/79 (6%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 R+ S +SP SP+++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP Sbjct: 1600 RYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1659 Query: 413 FSP-STGYSPSQPGYSPSS 360 FSP S +SP+ P YSP+S Sbjct: 1660 FSPASPAFSPTSPSYSPTS 1678 Score = 89.0 bits (219), Expect = 2e-16 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456 FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP Sbjct: 1646 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPG 1705 Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360 S TSP+ YSP+SP F SP++ P+ PGYSP+S Sbjct: 1706 WSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTS 1740 Score = 88.2 bits (217), Expect = 4e-16 Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 36/112 (32%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435 +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP G TSP Sbjct: 1639 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPK 1698 Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351 Y+P+SP +SP S GYSP+ P ++P+S Q Sbjct: 1699 YTPTSPGWSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1750 Score = 72.8 bits (177), Expect = 2e-11 Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 7/86 (8%) Frame = -2 Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +SP+SP+ SPTSP YSP+S YSPTSP S +SP Y TSP +SP+SP F+P Sbjct: 1566 YSPTSPFNTSPTSPGYSPSS-GYSPTSPGMSITSPRYM--------TSPGFSPASPTFAP 1616 Query: 404 -STGYSPSQPGY----SPSSTSQYTP 342 S YSP+ PGY SP+S S Y+P Sbjct: 1617 TSPAYSPTSPGYGQAQSPTSPS-YSP 1641 Score = 67.0 bits (162), Expect = 1e-09 Identities = 43/75 (57%), Positives = 51/75 (68%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP+ SP YSPTSP + SPTSP YSPSS YSP+SP S TSP Y +SP FSP Sbjct: 1555 FSPAGARSPGG--YSPTSPFNTSPTSPGYSPSSG-YSPTSPGMSITSPRYM-TSPGFSPA 1610 Query: 404 STGYSPSQPGYSPSS 360 S ++P+ P YSP+S Sbjct: 1611 SPTFAPTSPAYSPTS 1625 Score = 53.9 bits (128), Expect = 9e-06 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 8/84 (9%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTS--------PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 P S +SP + S T P + SP+ + S YSP+SP+N+ SP+SP Sbjct: 1526 PDSQFSPIGQTGSETPAGFTEYQPPGFGGFSPAGARSPGGYSPTSPFNT------SPTSP 1579 Query: 416 QFSPSTGYSPSQPGYSPSSTSQYT 345 +SPS+GYSP+ PG S +S T Sbjct: 1580 GYSPSSGYSPTSPGMSITSPRYMT 1603 [161][TOP] >UniRef100_C5PAJ4 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta SOWgp RepID=C5PAJ4_COCP7 Length = 1746 Score = 102 bits (255), Expect = 2e-20 Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 17/105 (16%) Frame = -2 Query: 578 FSPSSP-----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 +SP+SP SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP Sbjct: 1621 YSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPA 1680 Query: 413 FSPSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 +TG Y+P+ PG+SP+S Y+P + + P Sbjct: 1681 LGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFAGSP 1725 Score = 95.5 bits (236), Expect = 3e-18 Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 5/79 (6%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 R+ S +SP SP+++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP Sbjct: 1600 RYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1659 Query: 413 FSP-STGYSPSQPGYSPSS 360 FSP S +SP+ P YSP+S Sbjct: 1660 FSPASPAFSPTSPSYSPTS 1678 Score = 89.0 bits (219), Expect = 2e-16 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 22/95 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT------------------YSPSSPY 456 FSP+SP YSPTSPS+SP SP++SPTSPSYSP+SP Y+P+SP Sbjct: 1646 FSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPG 1705 Query: 455 NSGTSPD-YSPSSPQF--SPSTGYSPSQPGYSPSS 360 S TSP+ YSP+SP F SP++ P+ PGYSP+S Sbjct: 1706 WSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTS 1740 Score = 85.5 bits (210), Expect = 3e-15 Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 36/108 (33%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435 +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP G TSP Sbjct: 1639 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPK 1698 Query: 434 YSPSSPQFSP------------------------STGYSPSQPGYSPS 363 Y+P+SP +SP S GYSP+ P ++P+ Sbjct: 1699 YTPTSPGWSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTSPTFNPT 1746 Score = 72.8 bits (177), Expect = 2e-11 Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 7/86 (8%) Frame = -2 Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +SP+SP+ SPTSP YSP+S YSPTSP S +SP Y TSP +SP+SP F+P Sbjct: 1566 YSPTSPFNTSPTSPGYSPSS-GYSPTSPGMSITSPRYM--------TSPGFSPASPTFAP 1616 Query: 404 -STGYSPSQPGY----SPSSTSQYTP 342 S YSP+ PGY SP+S S Y+P Sbjct: 1617 TSPAYSPTSPGYGQAQSPTSPS-YSP 1641 Score = 67.0 bits (162), Expect = 1e-09 Identities = 43/75 (57%), Positives = 51/75 (68%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP+ SP YSPTSP + SPTSP YSPSS YSP+SP S TSP Y +SP FSP Sbjct: 1555 FSPAGARSPGG--YSPTSPFNTSPTSPGYSPSSG-YSPTSPGMSITSPRYM-TSPGFSPA 1610 Query: 404 STGYSPSQPGYSPSS 360 S ++P+ P YSP+S Sbjct: 1611 SPTFAPTSPAYSPTS 1625 Score = 53.9 bits (128), Expect = 9e-06 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 8/84 (9%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTS--------PSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 P S +SP + S T P + SP+ + S YSP+SP+N+ SP+SP Sbjct: 1526 PDSQFSPIGQTGSETPAGFTEYQPPGFGGFSPAGARSPGGYSPTSPFNT------SPTSP 1579 Query: 416 QFSPSTGYSPSQPGYSPSSTSQYT 345 +SPS+GYSP+ PG S +S T Sbjct: 1580 GYSPSSGYSPTSPGMSITSPRYMT 1603 [162][TOP] >UniRef100_C6F1F3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi RepID=C6F1F3_9APIC Length = 225 Score = 102 bits (254), Expect = 2e-20 Identities = 49/75 (65%), Positives = 59/75 (78%), Gaps = 3/75 (4%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP Y PTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP Sbjct: 62 KYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSP 121 Query: 404 STGY--SPSQPGYSP 366 ++ +PS P YSP Sbjct: 122 TSPVPNNPSSPHYSP 136 Score = 98.6 bits (244), Expect = 3e-19 Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +S +SP YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP S TSP YSP+SP++SP Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 115 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P + S+ Y+P Sbjct: 116 SPQYSPTSPVPNNPSSPHYSP 136 Score = 98.2 bits (243), Expect = 4e-19 Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 1/79 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S TSP YSP+SP++SP S Y Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112 Query: 392 SPSQPGYSPSSTSQYTPKT 336 SP+ P YSP+S P + Sbjct: 113 SPTSPQYSPTSPVPNNPSS 131 Score = 92.0 bits (227), Expect = 3e-17 Identities = 50/94 (53%), Positives = 61/94 (64%), Gaps = 15/94 (15%) Frame = -2 Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 +SP+SP +S SP YS TSP YSPTSP YSP+SP Y P+SP S TS Sbjct: 29 YSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTS 88 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SP++SP S YSP+ P YSP+S QY+P Sbjct: 89 PKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSP 121 Score = 81.6 bits (200), Expect = 4e-14 Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP P++P +SP YSP +SP+ Sbjct: 90 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPV--PNNP----SSPHYSPYAIASPK 143 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 FSP S YS S P Y S ++ Sbjct: 144 FSPTSPAYSISSPVYDQSGNAR 165 Score = 60.1 bits (144), Expect = 1e-07 Identities = 43/114 (37%), Positives = 53/114 (46%), Gaps = 25/114 (21%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSP------------------SYSPSSPTYSPSSP 459 ++SP+SP YSPTSP YSPTSP YSPTSP +SP+SP YS SSP Sbjct: 97 KYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSP 156 Query: 458 YNSGTSPDYSPSSPQFSPS-TGYSPSQPGYSPSSTSQYTPKTNDN-----KDDP 315 + + S SP+ SP Q S ++P N DDP Sbjct: 157 VYDQSGNARNKSQHPLSPAYILQSPVQVKQHIQDVSVFSPIQQANAEGAQNDDP 210 [163][TOP] >UniRef100_C6F1F0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax RepID=C6F1F0_PLAVI Length = 218 Score = 101 bits (252), Expect = 4e-20 Identities = 50/74 (67%), Positives = 58/74 (78%), Gaps = 3/74 (4%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SPS Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 115 Query: 401 TGY--SPSQPGYSP 366 + +PS P YSP Sbjct: 116 SPVPNNPSSPHYSP 129 Score = 97.1 bits (240), Expect = 9e-19 Identities = 48/77 (62%), Positives = 56/77 (72%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 112 Query: 392 SPSQPGYSPSSTSQYTP 342 SPS P + S+ Y+P Sbjct: 113 SPSSPVPNNPSSPHYSP 129 Score = 93.6 bits (231), Expect = 1e-17 Identities = 50/96 (52%), Positives = 60/96 (62%), Gaps = 15/96 (15%) Frame = -2 Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 +SP+SP +S SP YS TSP YSPTSP YSP+SP YSP+SP S TS Sbjct: 29 YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 88 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 P YSP+SP++SP S YSP+ P YSPSS P + Sbjct: 89 PKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 124 Score = 82.8 bits (203), Expect = 2e-14 Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414 ++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP P++P +SP YSP +SP+ Sbjct: 83 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 136 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 FSP S YS S P Y S ++ Sbjct: 137 FSPTSPAYSISSPVYDQSGNAR 158 Score = 80.1 bits (196), Expect = 1e-13 Identities = 47/99 (47%), Positives = 58/99 (58%), Gaps = 21/99 (21%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 450 SS + T YSPTSP+ YS TSP YSP+SP YSP+SP S Sbjct: 19 SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYS 78 Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 TSP YSP+SP++SP S YSP+ P YSP+S QY+P + Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PQYSPSS 116 [164][TOP] >UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa RepID=Q7SDN0_NEUCR Length = 1752 Score = 101 bits (252), Expect = 4e-20 Identities = 56/97 (57%), Positives = 70/97 (72%), Gaps = 7/97 (7%) Frame = -2 Query: 581 RFSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-YSPSSPQ 414 R+SP+SP +SPTSPSYSPTSPSYSP SP++ +SP+YSP+SP S TSPD YSP+SP Sbjct: 1653 RYSPTSPAQQFSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPTWSPTSPDAYSPTSPS 1712 Query: 413 F--SPSTGYSPSQP-GYSPSSTSQYTPKTNDNKDDPG 312 F SP SP+ P GYSP+S QY+P+T + G Sbjct: 1713 FQRSPGQQLSPTSPTGYSPTS-PQYSPRTPGRNNSGG 1748 Score = 95.9 bits (237), Expect = 2e-18 Identities = 55/115 (47%), Positives = 69/115 (60%), Gaps = 23/115 (20%) Frame = -2 Query: 581 RFSPSSPYSPTSPSY----------SPTSPSYSPTSPSYSPSSPT---YSPSSPYN--SG 447 RF+ S +SP+SPS+ SPTSPSYSPTSPSYSP+SP YSP+SP S Sbjct: 1606 RFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSP 1665 Query: 446 TSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306 TSP YSP+SP +SP S YSP+ P +SP+S Y+P + + PG Q Sbjct: 1666 TSPSYSPTSPSYSPASPAFQATSPSYSPASPTWSPTSPDAYSPTSPSFQRSPGQQ 1720 Score = 75.5 bits (184), Expect = 3e-12 Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 17/96 (17%) Frame = -2 Query: 578 FSPSSP---YSPTSPSYSP-----TSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDY 432 +SPSSP YSP+SP +SP +SP+SPS+SP+SP SP+SP S TSP Y Sbjct: 1585 YSPSSPAAGYSPSSPLLDSAGRFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSY 1644 Query: 431 SPSSP------QFSPSTGYSPSQPGYSPSSTSQYTP 342 SP+SP SP+ +SP+ P YSP+S S Y+P Sbjct: 1645 SPASPAAARYSPTSPAQQFSPTSPSYSPTSPS-YSP 1679 Score = 63.9 bits (154), Expect = 9e-09 Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 16/101 (15%) Frame = -2 Query: 569 SSPYSPTSP-SYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-- 405 +SP++PTSP SY YSP+SP+ YSPSSP + + S SP +SPSSP FSP Sbjct: 1571 TSPFTPTSPFSYG----GYSPSSPAAGYSPSSPLLDSAGRFAS--SPQFSPSSPSFSPTS 1624 Query: 404 ---------STGYSPSQPGYSPSS--TSQYTPKTNDNKDDP 315 S YSP+ P YSP+S ++Y+P + + P Sbjct: 1625 PMLRPGSPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSP 1665 [165][TOP] >UniRef100_C4JY44 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JY44_UNCRE Length = 1747 Score = 101 bits (252), Expect = 4e-20 Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 17/105 (16%) Frame = -2 Query: 578 FSPSSP-----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 +SP+SP SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP Sbjct: 1573 YSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPA 1632 Query: 413 FSPSTG------------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 TG Y+P+ PG+SP+S Y+P + + P Sbjct: 1633 LGGVTGRHLSPTSPTSPKYTPTSPGWSPTSPDAYSPTSPNFAGSP 1677 Score = 97.8 bits (242), Expect = 5e-19 Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 5/79 (6%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 RF S +SP SPS++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP Sbjct: 1552 RFMTSPGFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1611 Query: 413 FSP-STGYSPSQPGYSPSS 360 FSP S +SP+ P YSP+S Sbjct: 1612 FSPASPAFSPTSPSYSPTS 1630 Score = 89.0 bits (219), Expect = 2e-16 Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 30/109 (27%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TSPD 435 +SP+SP +SPTSPSYSPTSPS+SP SP++SP+SP+YSP+SP G TSP Sbjct: 1591 YSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGVTGRHLSPTSPTSPK 1650 Query: 434 YSPSSPQFSPST--GYSPSQ----------------PGYSPSSTSQYTP 342 Y+P+SP +SP++ YSP+ PGYSP+S + Y P Sbjct: 1651 YTPTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLLPPGYSPTSPT-YNP 1698 Score = 70.1 bits (170), Expect = 1e-10 Identities = 47/104 (45%), Positives = 57/104 (54%), Gaps = 25/104 (24%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPS-------------------SPTYSPSSP 459 FSP+ SP YSPTSP + SPTSP YSPS SP +SP+SP Sbjct: 1506 FSPAGARSPGG-GYSPTSPFNTSPTSPGYSPSSGYSPTSPGMGITSPRFMTSPGFSPASP 1564 Query: 458 YNSGTSPDYSPSSP-----QFSPSTGYSPSQPGYSPSSTSQYTP 342 + TSP YSP+SP Q S YSP+ PG+SP+S S Y+P Sbjct: 1565 SFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPS-YSP 1607 Score = 68.6 bits (166), Expect = 3e-10 Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 3/58 (5%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSPS 402 SP SPTSP Y+PTSP +SPTSP +YSP+SP + SP+SP S P YSP+SP ++P+ Sbjct: 1642 SPTSPTSPKYTPTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLLPPGYSPTSPTYNPN 1699 [166][TOP] >UniRef100_C5FCL2 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480 RepID=C5FCL2_NANOT Length = 1748 Score = 100 bits (250), Expect = 6e-20 Identities = 53/104 (50%), Positives = 68/104 (65%), Gaps = 16/104 (15%) Frame = -2 Query: 578 FSPSSP-----YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP- 417 +SP+SP SPTSPSYSPTSP +SPTSPSYSP+SP++SP+SP S TSP YSP+SP Sbjct: 1620 YSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSPTSPA 1679 Query: 416 ------QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP S Y+P+ PG+SP+S Y+P + + P Sbjct: 1680 LGGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFSGSP 1723 Score = 96.7 bits (239), Expect = 1e-18 Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 5/79 (6%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 RF S +SP SPS++PTSP+YSPTSP Y SP+SP+YSP+SP S TSP YSP+SP Sbjct: 1599 RFISSPAFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS 1658 Query: 413 FSP-STGYSPSQPGYSPSS 360 FSP S +SP+ P YSP+S Sbjct: 1659 FSPASPVFSPTSPSYSPTS 1677 Score = 82.4 bits (202), Expect = 2e-14 Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 14/90 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSP-YNSGTSPD 435 FSP+SP +SPTSPSYSPTSP+ SPTSP Y+P+SP +SP+SP S TSP+ Sbjct: 1659 FSPASPVFSPTSPSYSPTSPALGGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPN 1718 Query: 434 Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQ 351 + SP+SP S GYSP+ P ++P+S Q Sbjct: 1719 FSGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1748 Score = 71.6 bits (174), Expect = 4e-11 Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 6/84 (7%) Frame = -2 Query: 575 SPSSPYSPTSP-SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 SP YSP+SP + SPTSP+YSP+S YSP+SP S +SP +SP +SP+SP F+P S Sbjct: 1560 SPGGGYSPSSPFNTSPTSPAYSPSS-GYSPTSPGMSITSP-RFISSPAFSPASPSFAPTS 1617 Query: 401 TGYSPSQPGY----SPSSTSQYTP 342 YSP+ PGY SP+S S Y+P Sbjct: 1618 PAYSPTSPGYGQAQSPTSPS-YSP 1640 Score = 68.9 bits (167), Expect = 3e-10 Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 FSP P SP YSP+SP + SPTSP+YSPSS YSP+SP S TSP + SSP FSP Sbjct: 1553 FSPHEPRSPGG-GYSPSSPFNTSPTSPAYSPSSG-YSPTSPGMSITSPRFI-SSPAFSPA 1609 Query: 404 STGYSPSQPGYSPSS 360 S ++P+ P YSP+S Sbjct: 1610 SPSFAPTSPAYSPTS 1624 Score = 55.5 bits (132), Expect = 3e-06 Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 10/81 (12%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTS--------PSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPS 423 P S +SP + S + PSY SP + P SP YSPSSP+N+ SP+ Sbjct: 1524 PDSQFSPVRQAGSENAVGFADYQPPSYGGFSP-HEPRSPGGGYSPSSPFNT------SPT 1576 Query: 422 SPQFSPSTGYSPSQPGYSPSS 360 SP +SPS+GYSP+ PG S +S Sbjct: 1577 SPAYSPSSGYSPTSPGMSITS 1597 [167][TOP] >UniRef100_Q54LJ4 Type A von Willebrand factor domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q54LJ4_DICDI Length = 2563 Score = 100 bits (249), Expect = 8e-20 Identities = 48/73 (65%), Positives = 53/73 (72%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 F S PYSPTSP Y PTSPSYSPTSPSYSP+SP+YSP+SP S TSP YS S S S Sbjct: 1840 FQASQPYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQ 1899 Query: 398 GYSPSQPGYSPSS 360 YSP P Y+P+S Sbjct: 1900 SYSPVSPSYTPTS 1912 Score = 97.8 bits (242), Expect = 5e-19 Identities = 52/103 (50%), Positives = 66/103 (64%), Gaps = 15/103 (14%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNS------GTSPDYSPSS 420 +SP+SP Y PTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TS YSP S Sbjct: 1846 YSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVS 1905 Query: 419 PQFSPST--------GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 P ++P++ YSP P Y+P+ S+ T+ + P Sbjct: 1906 PSYTPTSLLYAPTIPSYSPVSPSYAPTKPSKLPVLTSYSPSSP 1948 Score = 89.4 bits (220), Expect = 2e-16 Identities = 45/77 (58%), Positives = 53/77 (68%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393 P S + S YSPTSP Y PTSPSYSP+SP+YSP+SP S TSP YSP+SP +S S Y Sbjct: 1835 PPSLFFQASQPYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLY 1894 Query: 392 SPSQPGYSPSSTSQYTP 342 + + YSP S S YTP Sbjct: 1895 ASTSQSYSPVSPS-YTP 1910 Score = 82.4 bits (202), Expect = 2e-14 Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 15/91 (16%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYS-------------PTSPSYSPSSPTYSPSSPYNSGTS 441 +SP+SP YSPTSPSYSPTSPSYS P SPSY+P+S Y+P+ P S S Sbjct: 1867 YSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTSLLYAPTIPSYSPVS 1926 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQ 351 P Y+P+ P P T YSPS P +S S + Sbjct: 1927 PSYAPTKPSKLPVLTSYSPSSPSFSKSKAKE 1957 Score = 74.7 bits (182), Expect = 5e-12 Identities = 42/89 (47%), Positives = 50/89 (56%), Gaps = 12/89 (13%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 S S YSP SPSY+PTS Y+PT PSYSP SP+Y+P+ P YSPSSP FS S Sbjct: 1896 STSQSYSPVSPSYTPTSLLYAPTIPSYSPVSPSYAPTKPSKLPVLTSYSPSSPSFSKSKA 1955 Query: 395 YS---------PSQP---GYSPSSTSQYT 345 PS+P GYS ST ++ Sbjct: 1956 KEESTLSEINLPSKPMVAGYSRMSTVSFS 1984 [168][TOP] >UniRef100_O77375 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7 RepID=O77375_PLAF7 Length = 2457 Score = 100 bits (249), Expect = 8e-20 Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 3/77 (3%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP Sbjct: 2294 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 2353 Query: 404 ST--GYSPSQPGYSPSS 360 ++ + + P YSP S Sbjct: 2354 TSPVAQNIASPNYSPYS 2370 Score = 99.8 bits (247), Expect = 1e-19 Identities = 48/71 (67%), Positives = 55/71 (77%), Gaps = 1/71 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y Sbjct: 2285 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2344 Query: 392 SPSQPGYSPSS 360 SP+ P YSP+S Sbjct: 2345 SPTSPKYSPTS 2355 Score = 99.4 bits (246), Expect = 2e-19 Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 +S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP Sbjct: 2288 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2347 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S YSP+ P ++ Y+P Sbjct: 2348 SPKYSPTSPVAQNIASPNYSP 2368 Score = 94.4 bits (233), Expect = 6e-18 Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 +S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y Sbjct: 2278 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2337 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S +Y+P Sbjct: 2338 SPTSPKYSPTS-PKYSP 2353 Score = 80.1 bits (196), Expect = 1e-13 Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S TSP Sbjct: 2322 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 2381 Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330 YS SSP + S + P P Y S Q D Sbjct: 2382 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 2420 Score = 78.2 bits (191), Expect = 4e-13 Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 12/91 (13%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDY 432 +SPS YSPTSP+Y+ + YSPTSP Y+ SP YS +SP S TSP Y Sbjct: 2245 YSPS--YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKY 2302 Query: 431 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP+SP++SP S YSP+ P YSP+S +Y+P Sbjct: 2303 SPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2332 [169][TOP] >UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis RepID=B4MAN9_DROVI Length = 1889 Score = 100 bits (249), Expect = 8e-20 Identities = 49/97 (50%), Positives = 66/97 (68%), Gaps = 7/97 (7%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +S +SP YSP SPSYSP+SPSYSPTSP YSP+SP+YSP+SP + +P YSP+SP +S S Sbjct: 1680 YSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739 Query: 401 TGYSPSQPGYSPS------STSQYTPKTNDNKDDPGT 309 YSP+ P YS + ++ Y+P + PG+ Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGS 1776 Score = 100 bits (248), Expect = 1e-19 Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP + YSP+S +YS SPSYSP SPSYSPSSP+YSP+SP S TSP YSP+SP ++P+T Sbjct: 1667 YSPGNAYSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726 Query: 398 -GYSPSQPGYSPSSTSQYTP 342 YSP+ P YS S Y+P Sbjct: 1727 PSYSPTSPNYSAS--PHYSP 1744 Score = 90.9 bits (224), Expect = 7e-17 Identities = 50/100 (50%), Positives = 62/100 (62%), Gaps = 22/100 (22%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSP------- 438 SP SP Y+P SP YSPTSP YSPTSP YSPSSP +SPS+ Y+ S TSP Sbjct: 1773 SPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832 Query: 437 -------DYSPSSPQFSPST-GYSPSQPGYSPSSTSQYTP 342 YSP+SP ++P+ YSP+ P YSP++ S Y+P Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872 Score = 90.1 bits (222), Expect = 1e-16 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 31/110 (28%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYS--------------------PSSPTYSPSS 462 +SP+SP YSPTSP+Y+P +PSYSPTSP+YS P+SPTYSP S Sbjct: 1708 YSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPS 1767 Query: 461 PYNSGT---------SPDYSPSSPQFSPSTG-YSPSQPGYSPSSTSQYTP 342 P G+ SP YSP+SP++SP++ YSPS P +SPS +QY+P Sbjct: 1768 PSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPS--NQYSP 1815 Score = 87.0 bits (214), Expect = 9e-16 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-- 402 SPS+ YSPT +YS TSP YSP YSPSS YSP+SP + T+ +YSP+SP +SP+ Sbjct: 1808 SPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAP 1867 Query: 401 TGYSPSQPGYSPSS 360 + YSP+ P YSPSS Sbjct: 1868 SHYSPTSPAYSPSS 1881 Score = 86.7 bits (213), Expect = 1e-15 Identities = 48/88 (54%), Positives = 62/88 (70%), Gaps = 7/88 (7%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + TS Y+ ++P Sbjct: 1566 SPHFSTSPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSLRYASATPN 1625 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTPKTN 333 F+P STGYSPS GYSP+S Y+P +N Sbjct: 1626 FNPQSTGYSPSSSGYSPTS-PVYSPTSN 1652 Score = 86.3 bits (212), Expect = 2e-15 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 11/91 (12%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 ++SP+SP YSP SPSY SP SP Y+P SP YSP+SP YSP+SP S +SP +SPS+ Q+ Sbjct: 1755 KYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSN-QY 1813 Query: 410 SP--------STGYSPSQPGYSPSSTSQYTP 342 SP S YSP+ YSPSST +Y+P Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843 Score = 85.9 bits (211), Expect = 2e-15 Identities = 47/85 (55%), Positives = 56/85 (65%), Gaps = 7/85 (8%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN------SGTSPDYSPSSPQ 414 SPS SP SP Y+P SP YSPTSP YSP+SP YSPSSP + S T YS +SP+ Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1826 Query: 413 FSPSTG-YSPSQPGYSPSSTSQYTP 342 +SP+ YSPS YSP+S + YTP Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPT-YTP 1850 Score = 76.6 bits (187), Expect = 1e-12 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -2 Query: 581 RFSPS-SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSGTSPDYSPSSPQFS 408 R+SP+ S YSP+S YSPTSP+Y+PT+ +YSP+SP YSP++P + S TSP YSPSSP F Sbjct: 1826 RYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFE 1885 Query: 407 PS 402 S Sbjct: 1886 ES 1887 Score = 73.6 bits (179), Expect = 1e-11 Identities = 56/148 (37%), Positives = 65/148 (43%), Gaps = 67/148 (45%) Frame = -2 Query: 578 FSPSSP-------------YSPTSPSYSPTSP---------------------------- 522 +SP+SP YSP+SP+YSPTSP Sbjct: 1579 YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSLRYASATPNFNPQSTGYSPSSS 1638 Query: 521 SYSPTSPSYSP-----SSPT--------------YSPSSPYNSGTSPDYSPSSPQFSPST 399 YSPTSP YSP SSP+ YSPSS S SP YSP SP +SPS+ Sbjct: 1639 GYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSSNSPSYSPMSPSYSPSS 1698 Query: 398 -GYSPSQPGYSPSSTS------QYTPKT 336 YSP+ P YSP+S S YTP T Sbjct: 1699 PSYSPTSPCYSPTSPSYSPTSPNYTPAT 1726 Score = 64.3 bits (155), Expect = 7e-09 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSPS S +P PS+SP+ SPS+SP P SPSSP + SP + SP Sbjct: 1518 FSPSGHVSGMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPHFSTSPSVSP 1577 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360 YSP+SP ++ S+ YSPS P YSP+S Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 1609 [170][TOP] >UniRef100_C8VQG7 DNA-directed RNA polymerase (EC 2.7.7.6) [Source:UniProtKB/TrEMBL;Acc:Q873Q6] n=2 Tax=Emericella nidulans RepID=C8VQG7_EMENI Length = 1745 Score = 100 bits (248), Expect = 1e-19 Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 21/109 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPSY---SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 F+P+SP YSPTSP+Y SPTSPSYSPTSP +SP+SP YSP+SP S TSP +SP+SP + Sbjct: 1612 FAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSY 1671 Query: 410 SP-----------------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP S Y+P+ PG+SP+S Y+P + + P Sbjct: 1672 SPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1720 Score = 99.0 bits (245), Expect = 2e-19 Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 4/78 (5%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 RF S +SP SPS++PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP F Sbjct: 1598 RFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSF 1657 Query: 410 SP-STGYSPSQPGYSPSS 360 SP S +SP+ P YSP+S Sbjct: 1658 SPTSPAFSPTSPSYSPTS 1675 Score = 91.7 bits (226), Expect = 4e-17 Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 34/110 (30%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG---------TSPDYS 429 +SP+SP +SPTSP+YSPTSPS+SPTSP++SP+SP+YSP+SP G TSP Y+ Sbjct: 1636 YSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYT 1695 Query: 428 PSSPQFSP------------------------STGYSPSQPGYSPSSTSQ 351 P+SP +SP S GYSP+ P +SP+S Q Sbjct: 1696 PTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPTSPRQ 1745 Score = 90.1 bits (222), Expect = 1e-16 Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 17/96 (17%) Frame = -2 Query: 578 FSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSG 447 +SP+S YSPTSP +SP SPS++PTSP+YSP+SP Y SP+SP S Sbjct: 1579 YSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSP 1638 Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 TSP +SP+SP +SP S +SP+ P +SP+S S Y+P Sbjct: 1639 TSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPS-YSP 1673 Score = 68.9 bits (167), Expect = 3e-10 Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 6/85 (7%) Frame = -2 Query: 578 FSPSSPYS--PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +SPSSP+S PTSP YSPTS SYSPTSP +SP + TSP +SP+SP F+P Sbjct: 1564 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFM--------TSPGFSPASPSFAP 1614 Query: 404 -STGYSPSQPG---YSPSSTSQYTP 342 S YSP+ P SP+S S Y+P Sbjct: 1615 TSPAYSPTSPAYGQASPTSPS-YSP 1638 [171][TOP] >UniRef100_B6QAY2 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QAY2_PENMQ Length = 1744 Score = 100 bits (248), Expect = 1e-19 Identities = 55/112 (49%), Positives = 65/112 (58%), Gaps = 24/112 (21%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 FSP SP YSPTSPS+ TSPSYSPTSP +SPSSP YSPSSP S SP +SPS Sbjct: 1607 FSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSPASPAFSPS 1666 Query: 422 SPQFSP----------------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP +SP S YSP+ PG+SP+S Y+P + + P Sbjct: 1667 SPTYSPTSPAIGGRQFSPSSPSSPKYSPASPGWSPTSPEIYSPTSPNIHGSP 1718 Score = 94.7 bits (234), Expect = 5e-18 Identities = 48/88 (54%), Positives = 66/88 (75%), Gaps = 6/88 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 RF +SP +SP SP+++ TSP+YSPTSPS+ +SP+YSP+SP S +SP+YSPSSP FSP Sbjct: 1599 RFMSTSPGFSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSP 1658 Query: 404 -STGYSPSQPGYSPSSTS----QYTPKT 336 S +SPS P YSP+S + Q++P + Sbjct: 1659 ASPAFSPSSPTYSPTSPAIGGRQFSPSS 1686 Score = 78.2 bits (191), Expect = 4e-13 Identities = 44/90 (48%), Positives = 60/90 (66%), Gaps = 9/90 (10%) Frame = -2 Query: 578 FSPSSPY--SPTSP------SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SP+SP+ SP SP SYSP+SP+ S TSP + +SP +SP SP + TSP YSP+ Sbjct: 1565 YSPTSPFNTSPVSPGYSPSSSYSPSSPNMSVTSPRFMSTSPGFSPQSPAFAITSPAYSPT 1624 Query: 422 SPQF-SPSTGYSPSQPGYSPSSTSQYTPKT 336 SP F + S YSP+ P +SPSS + Y+P + Sbjct: 1625 SPSFQATSPSYSPTSPRFSPSSPN-YSPSS 1653 Score = 77.8 bits (190), Expect = 6e-13 Identities = 50/104 (48%), Positives = 65/104 (62%), Gaps = 27/104 (25%) Frame = -2 Query: 581 RFSPSSP--------YSPTSPSYSPTSPSYSPTSPS-----YSPSSPTY---SPSSPYNS 450 RFSPSSP +SP SP++SP+SP+YSPTSP+ +SPSSP+ SP+SP S Sbjct: 1641 RFSPSSPNYSPSSPNFSPASPAFSPSSPTYSPTSPAIGGRQFSPSSPSSPKYSPASPGWS 1700 Query: 449 GTSPD-YSPSSPQF-----SPSTG-----YSPSQPGYSPSSTSQ 351 TSP+ YSP+SP SP+ G YSP+ P Y+P+S Q Sbjct: 1701 PTSPEIYSPTSPNIHGSPTSPARGATSPSYSPTSPQYNPTSPRQ 1744 [172][TOP] >UniRef100_B6H9U6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6H9U6_PENCW Length = 1733 Score = 100 bits (248), Expect = 1e-19 Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 14/102 (13%) Frame = -2 Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417 +SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP Sbjct: 1610 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1669 Query: 416 ----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP S Y+P+ PG+SP+S Y+P + + P Sbjct: 1670 GGARHLSPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNFSGSP 1711 Score = 95.9 bits (237), Expect = 2e-18 Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 13/86 (15%) Frame = -2 Query: 578 FSPSSP---------YSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPD 435 +SP+SP +SP SP++ PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+ Sbjct: 1581 YSPTSPGIGMMTSPGFSPASPTFQPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPN 1640 Query: 434 YSPSSPQFSP-STGYSPSQPGYSPSS 360 YSP+SP FSP S +SP+ P YSP+S Sbjct: 1641 YSPTSPSFSPASPAFSPTSPSYSPTS 1666 Score = 83.6 bits (205), Expect = 1e-14 Identities = 47/87 (54%), Positives = 59/87 (67%), Gaps = 11/87 (12%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY---------SPTSPSYSPSSPTYSPSSPYN-SGTSPDY 432 FSP+SP +SPTSPSYSPTSP+ SPTSP Y+P+SP +SP+SP + S TSP++ Sbjct: 1648 FSPASPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNF 1707 Query: 431 SPSSPQFSPSTGYSPSQPGYSPSSTSQ 351 S SP S YSP+ P YSP+S Q Sbjct: 1708 S-GSPTSPTSPAYSPTSPAYSPTSPRQ 1733 Score = 70.5 bits (171), Expect = 9e-11 Identities = 45/101 (44%), Positives = 55/101 (54%), Gaps = 26/101 (25%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSP-SYSPTSPSYSPS---------------------SPTYSPS 465 F SP + + YSPTSP + SPTSP YSPS SPT+ P+ Sbjct: 1547 FGGFSPAARSPGGYSPTSPFNTSPTSPGYSPSSSYSPTSPGIGMMTSPGFSPASPTFQPT 1606 Query: 464 SPYNSGTSPDY---SPSSPQFSP-STGYSPSQPGYSPSSTS 354 SP S TSP Y SP+SP +SP S G+SP+ P YSP+S S Sbjct: 1607 SPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPS 1647 [173][TOP] >UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina RepID=B2AA31_PODAN Length = 1748 Score = 99.8 bits (247), Expect = 1e-19 Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 6/87 (6%) Frame = -2 Query: 578 FSPSSP---YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-YSPSSPQF 411 +SP+SP SPTSPSYSPTSPSYSP SP++ +SP+YSP+SP S TSPD YSP+SP F Sbjct: 1652 YSPTSPAQFQSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTF 1711 Query: 410 --SPSTGYSPSQPGYSPSSTSQYTPKT 336 SP SP+ PGYSP+S S ++P+T Sbjct: 1712 QRSPGQQMSPTSPGYSPTSPS-FSPRT 1737 Score = 97.4 bits (241), Expect = 7e-19 Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 24/116 (20%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSP-------------YNS 450 RF+ S +SP+SPS+SPTSP SPTSPSYSP+SP+YSP+SP + S Sbjct: 1603 RFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQS 1662 Query: 449 GTSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306 TSP YSP+SP +SP S YSP+ P +SP+S Y+P + + PG Q Sbjct: 1663 PTSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPGQQ 1718 Score = 67.0 bits (162), Expect = 1e-09 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 10/71 (14%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSP-SYSPSSPTY--------SPSSPYNSGTSPDYS 429 +SP+SP + TSPSYSP SP++SPTSP +YSP+SPT+ SP+SP S TSP +S Sbjct: 1675 YSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPGQQMSPTSPGYSPTSPSFS 1734 Query: 428 PSSPQFSPSTG 396 P +P + +G Sbjct: 1735 PRTPGRAAGSG 1745 Score = 63.2 bits (152), Expect = 1e-08 Identities = 47/103 (45%), Positives = 57/103 (55%), Gaps = 25/103 (24%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSP-SYSPTSP---SYSPSSPT--YSPSSPY-----NSGTSPDYS 429 S +PY+ TSP PTSP + SPTSP YSP+SP YSP+SP +SP +S Sbjct: 1554 SSVNPYA-TSPG-RPTSPFTTSPTSPFSYGYSPTSPAAGYSPTSPLIDAGGRFASSPQFS 1611 Query: 428 PSSPQFSP-----------STGYSPSQPGYSPSS---TSQYTP 342 PSSP FSP S YSP+ P YSP+S T Y+P Sbjct: 1612 PSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAATRHYSP 1654 [174][TOP] >UniRef100_Q5KGG3 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans RepID=Q5KGG3_CRYNE Length = 1786 Score = 99.4 bits (246), Expect = 2e-19 Identities = 55/93 (59%), Positives = 64/93 (68%), Gaps = 13/93 (13%) Frame = -2 Query: 581 RFSPSSPYSP-----------TSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN-SGTSP 438 R SP SP SP TSP YSPTSP YSPTSP++SP+SP+YSP+SP TSP Sbjct: 1641 RASPYSPTSPAYSPTSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAPFQATSP 1700 Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 YSP+SPQFSP S YSP+ P YSP+S QY+P Sbjct: 1701 RYSPTSPQFSPTSPTYSPASPAYSPTS-PQYSP 1732 Score = 94.0 bits (232), Expect = 8e-18 Identities = 49/101 (48%), Positives = 60/101 (59%), Gaps = 27/101 (26%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSG------------------- 447 S YSPTSP YSPTSP +SPTSPS+SPSSPTYSP+SP G Sbjct: 1595 SPAYSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSP 1654 Query: 446 -------TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQY 348 TSP YSP+SP++SP S +SP+ P YSP+S + + Sbjct: 1655 TSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAPF 1695 Score = 92.0 bits (227), Expect = 3e-17 Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 9/98 (9%) Frame = -2 Query: 578 FSPSSP-YSPTSPS--------YSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 FSP+SP YSPTSP+ YSPTSP +SPTSP+YSP+SP YSP+SP S TSP YSP Sbjct: 1680 FSPTSPSYSPTSPAPFQATSPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSP 1739 Query: 425 SSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 +SP YSP+ P Y ++ + T + + + PG Sbjct: 1740 TSP------AYSPTSPAYGGAAPNGGTAQQQNGQARPG 1771 Score = 88.6 bits (218), Expect = 3e-16 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 35/114 (30%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSP----------------SYSPTSPSYSPSSPTYSPSSPYNSG 447 +SP+SP++ TSP+YSPTSP Y TSP+YSP+SP YSP+SP S Sbjct: 1555 YSPTSPFAVTSPAYSPTSPFAGAAAGAASPWVGRGGYGATSPAYSPTSPQYSPTSPQFSP 1614 Query: 446 TSPDYSPSSPQFSP-------------STGYSPSQPGYSPSS------TSQYTP 342 TSP +SPSSP +SP ++ YSP+ P YSP+S + QY+P Sbjct: 1615 TSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSPTSPMGGITSPQYSP 1668 Score = 71.2 bits (173), Expect = 5e-11 Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SP Y ++P + P + + Sbjct: 1716 YSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYGGAAPNGGTAQQQNGQARPGWGNT 1775 Query: 401 TGYSPS 384 GY S Sbjct: 1776 GGYGTS 1781 Score = 66.6 bits (161), Expect = 1e-09 Identities = 43/99 (43%), Positives = 56/99 (56%), Gaps = 26/99 (26%) Frame = -2 Query: 578 FSPSSPYSPTSPS-YSPTSPS-YSPTSPSYSPSSPTYSPSSPY----------------- 456 + S + SP+ YSP+SP+ YSPTSP ++ +SP YSP+SP+ Sbjct: 1533 YGQSPMHGGMSPAGYSPSSPAGYSPTSP-FAVTSPAYSPTSPFAGAAAGAASPWVGRGGY 1591 Query: 455 ------NSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360 S TSP YSP+SPQFSP S +SPS P YSP+S Sbjct: 1592 GATSPAYSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPAS 1630 [175][TOP] >UniRef100_Q9HGZ5 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=Q9HGZ5_ASPOR Length = 1748 Score = 99.0 bits (245), Expect = 2e-19 Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%) Frame = -2 Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417 +SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP Sbjct: 1621 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1680 Query: 416 -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP S Y+P+ PG+SP+S Y+P + + P Sbjct: 1681 GGAARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1723 Score = 94.4 bits (233), Expect = 6e-18 Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 25/98 (25%) Frame = -2 Query: 578 FSPSSPYSPT---------------------SPSYSPTSPSYSPTSPSY---SPSSPTYS 471 +SPSS YSPT SPS++PTSP+YSPTSP+Y SP+SP+YS Sbjct: 1580 YSPSSSYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYS 1639 Query: 470 PSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360 P+SP S TSP+YSP+SP FSP S +SP+ P YSP+S Sbjct: 1640 PTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1677 Score = 86.7 bits (213), Expect = 1e-15 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 14/90 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435 FSP+SP +SPTSPSYSPTSP+ SPTSP Y+P+SP +SP+SP S TSP+ Sbjct: 1659 FSPASPAFSPTSPSYSPTSPAIGGAARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1718 Query: 434 Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQ 351 + SP+SP S GYSP+ P +SPSS Q Sbjct: 1719 FAGSPTSPGGPTSPGYSPTSPAFSPSSPRQ 1748 Score = 83.2 bits (204), Expect = 1e-14 Identities = 49/91 (53%), Positives = 63/91 (69%), Gaps = 12/91 (13%) Frame = -2 Query: 578 FSPSSPYS--PTSP------SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SPSSP+S PTSP SYSPTSP + TSP +S +SP +SP+SP + TSP YSP+ Sbjct: 1565 YSPSSPFSANPTSPGYSPSSSYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPT 1624 Query: 422 SP---QFSP-STGYSPSQPGYSPSSTSQYTP 342 SP Q SP S YSP+ PG+SP+S + Y+P Sbjct: 1625 SPAYGQASPTSPSYSPTSPGFSPTSPN-YSP 1654 Score = 70.1 bits (170), Expect = 1e-10 Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 3/76 (3%) Frame = -2 Query: 578 FSPSSPYSPTSPS-YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 FSP++ TSP+ YSP+SP S +PTSP YSPSS +YSP+SP + TSP +S +SP FSP Sbjct: 1555 FSPAA----TSPAGYSPSSPFSANPTSPGYSPSS-SYSPTSPGMAMTSPRFSMTSPGFSP 1609 Query: 404 -STGYSPSQPGYSPSS 360 S ++P+ P YSP+S Sbjct: 1610 ASPSFAPTSPAYSPTS 1625 Score = 60.1 bits (144), Expect = 1e-07 Identities = 45/97 (46%), Positives = 57/97 (58%), Gaps = 24/97 (24%) Frame = -2 Query: 560 YSPTSP---SYSP--TSPS-YSPTSP-SYSPSSPTYSPSSPYN-------------SGTS 441 Y PT +SP TSP+ YSP+SP S +P+SP YSPSS Y+ S TS Sbjct: 1545 YQPTGGFGGGFSPAATSPAGYSPSSPFSANPTSPGYSPSSSYSPTSPGMAMTSPRFSMTS 1604 Query: 440 PDYSPSSPQFSP-STGYSPSQPGY---SPSSTSQYTP 342 P +SP+SP F+P S YSP+ P Y SP+S S Y+P Sbjct: 1605 PGFSPASPSFAPTSPAYSPTSPAYGQASPTSPS-YSP 1640 [176][TOP] >UniRef100_B0XMU6 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus RepID=B0XMU6_ASPFC Length = 1750 Score = 99.0 bits (245), Expect = 2e-19 Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 4/78 (5%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 RF S +SP SPS++PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP F Sbjct: 1599 RFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSF 1658 Query: 410 SP-STGYSPSQPGYSPSS 360 SP S +SP+ P YSP+S Sbjct: 1659 SPASPAFSPTSPSYSPTS 1676 Score = 99.0 bits (245), Expect = 2e-19 Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%) Frame = -2 Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417 +SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP Sbjct: 1620 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1679 Query: 416 -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP S Y+P+ PG+SP+S Y+P + + P Sbjct: 1680 GGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1722 Score = 90.1 bits (222), Expect = 1e-16 Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 17/96 (17%) Frame = -2 Query: 578 FSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSG 447 +SP+S YSPTSP +SP SPS++PTSP+YSP+SP Y SP+SP S Sbjct: 1580 YSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSP 1639 Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 TSP +SP+SP +SP S +SP+ P +SP+S S Y+P Sbjct: 1640 TSPGFSPTSPNYSPTSPSFSPASPAFSPTSPS-YSP 1674 Score = 84.3 bits (207), Expect = 6e-15 Identities = 49/96 (51%), Positives = 63/96 (65%), Gaps = 14/96 (14%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435 FSP+SP +SPTSPSYSPTSP+ SPTSP Y+P+SP +SP+SP S TSP+ Sbjct: 1658 FSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1717 Query: 434 Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTN 333 + SP+SP S GYSP+ P +SPS Y P ++ Sbjct: 1718 FAGSPTSPGGPTSPGYSPTSPAFSPS----YVPSSS 1749 Score = 68.9 bits (167), Expect = 3e-10 Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 6/85 (7%) Frame = -2 Query: 578 FSPSSPYS--PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +SPSSP+S PTSP YSPTS SYSPTSP +SP + TSP +SP+SP F+P Sbjct: 1565 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFM--------TSPGFSPASPSFAP 1615 Query: 404 -STGYSPSQPG---YSPSSTSQYTP 342 S YSP+ P SP+S S Y+P Sbjct: 1616 TSPAYSPTSPAYGQASPTSPS-YSP 1639 [177][TOP] >UniRef100_A2QAT7 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2QAT7_ASPNC Length = 1747 Score = 99.0 bits (245), Expect = 2e-19 Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%) Frame = -2 Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417 +SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP Sbjct: 1620 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAV 1679 Query: 416 -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP S Y+P+ PG+SP+S Y+P + + P Sbjct: 1680 GGVGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1722 Score = 93.2 bits (230), Expect = 1e-17 Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 25/98 (25%) Frame = -2 Query: 578 FSPSSPYSPT---------------------SPSYSPTSPSYSPTSPSY---SPSSPTYS 471 +SP+S YSPT SPS++PTSP+YSPTSP+Y SP+SP+YS Sbjct: 1579 YSPTSSYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYS 1638 Query: 470 PSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360 P+SP S TSP+YSP+SP FSP S +SP+ P YSP+S Sbjct: 1639 PTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1676 Score = 85.5 bits (210), Expect = 3e-15 Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 14/90 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435 FSP+SP +SPTSPSYSPTSP+ SPTSP Y+P+SP +SP+SP S TSP+ Sbjct: 1658 FSPASPAFSPTSPSYSPTSPAVGGVGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1717 Query: 434 Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQ 351 + SP+SP S GYSP+ P +SP+S Q Sbjct: 1718 FAGSPTSPGGPTSPGYSPTSPAFSPTSPRQ 1747 Score = 82.0 bits (201), Expect = 3e-14 Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 13/92 (14%) Frame = -2 Query: 578 FSPSSPYS--PTSPSYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYNSGTSPDYSP 426 +SPSSP+S PTSP YSPTS SYSPTSP + +SP +SP+SP + TSP YSP Sbjct: 1564 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSP 1622 Query: 425 SSP---QFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP Q SP S YSP+ PG+SP+S + Y+P Sbjct: 1623 TSPAYGQASPTSPSYSPTSPGFSPTSPN-YSP 1653 Score = 67.0 bits (162), Expect = 1e-09 Identities = 40/76 (52%), Positives = 55/76 (72%), Gaps = 3/76 (3%) Frame = -2 Query: 578 FSPSSPYSPTSPS-YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 FSP++ TSP+ YSP+SP S +PTSP YSP+S +YSP+SP + TSP + +SP FSP Sbjct: 1554 FSPAA----TSPAGYSPSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSP 1608 Query: 404 -STGYSPSQPGYSPSS 360 S ++P+ P YSP+S Sbjct: 1609 ASPSFAPTSPAYSPTS 1624 [178][TOP] >UniRef100_A1D1U9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D1U9_NEOFI Length = 1750 Score = 99.0 bits (245), Expect = 2e-19 Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 4/78 (5%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 RF S +SP SPS++PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP F Sbjct: 1599 RFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSF 1658 Query: 410 SP-STGYSPSQPGYSPSS 360 SP S +SP+ P YSP+S Sbjct: 1659 SPASPAFSPTSPSYSPTS 1676 Score = 99.0 bits (245), Expect = 2e-19 Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%) Frame = -2 Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417 +SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP Sbjct: 1620 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1679 Query: 416 -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP S Y+P+ PG+SP+S Y+P + + P Sbjct: 1680 GGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1722 Score = 90.1 bits (222), Expect = 1e-16 Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 17/96 (17%) Frame = -2 Query: 578 FSPSSPYSPTSPS-------------YSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSG 447 +SP+S YSPTSP +SP SPS++PTSP+YSP+SP Y SP+SP S Sbjct: 1580 YSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSP 1639 Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 TSP +SP+SP +SP S +SP+ P +SP+S S Y+P Sbjct: 1640 TSPGFSPTSPNYSPTSPSFSPASPAFSPTSPS-YSP 1674 Score = 84.3 bits (207), Expect = 6e-15 Identities = 49/96 (51%), Positives = 63/96 (65%), Gaps = 14/96 (14%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435 FSP+SP +SPTSPSYSPTSP+ SPTSP Y+P+SP +SP+SP S TSP+ Sbjct: 1658 FSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1717 Query: 434 Y--SPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTN 333 + SP+SP S GYSP+ P +SPS Y P ++ Sbjct: 1718 FAGSPTSPGGPTSPGYSPTSPAFSPS----YVPSSS 1749 Score = 68.9 bits (167), Expect = 3e-10 Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 6/85 (7%) Frame = -2 Query: 578 FSPSSPYS--PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 +SPSSP+S PTSP YSPTS SYSPTSP +SP + TSP +SP+SP F+P Sbjct: 1565 YSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFM--------TSPGFSPASPSFAP 1615 Query: 404 -STGYSPSQPG---YSPSSTSQYTP 342 S YSP+ P SP+S S Y+P Sbjct: 1616 TSPAYSPTSPAYGQASPTSPS-YSP 1639 [179][TOP] >UniRef100_A1CNZ4 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus RepID=A1CNZ4_ASPCL Length = 1765 Score = 99.0 bits (245), Expect = 2e-19 Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 15/103 (14%) Frame = -2 Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417 +SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP++SP+SP S TSP YSP+SP Sbjct: 1627 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAI 1686 Query: 416 -----QFSP----STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP S Y+P+ PG+SP+S Y+P + + P Sbjct: 1687 GGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSP 1729 Score = 97.1 bits (240), Expect = 9e-19 Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 4/77 (5%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 F S +SP SPS++PTSP+YSPTSP+Y SP+SP+YSP+SP S TSP+YSP+SP FS Sbjct: 1607 FMTSPGFSPVSPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFS 1666 Query: 407 P-STGYSPSQPGYSPSS 360 P S +SP+ P YSP+S Sbjct: 1667 PASPAFSPTSPSYSPTS 1683 Score = 87.4 bits (215), Expect = 7e-16 Identities = 44/80 (55%), Positives = 59/80 (73%), Gaps = 4/80 (5%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTY---SPSSPYNSGTSPDYSPSSPQFSP-S 402 +SP TSP +SP SPS++PTSP+YSP+SP Y SP+SP S TSP +SP+SP +SP S Sbjct: 1603 TSPGFMTSPGFSPVSPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTS 1662 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 +SP+ P +SP+S S Y+P Sbjct: 1663 PSFSPASPAFSPTSPS-YSP 1681 Score = 84.0 bits (206), Expect = 8e-15 Identities = 47/86 (54%), Positives = 59/86 (68%), Gaps = 14/86 (16%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYN-SGTSPD 435 FSP+SP +SPTSPSYSPTSP+ SPTSP Y+P+SP +SP+SP S TSP+ Sbjct: 1665 FSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPN 1724 Query: 434 Y--SPSSPQFSPSTGYSPSQPGYSPS 363 + SP+SP S GYSP+ P +SPS Sbjct: 1725 FAGSPTSPGGPTSPGYSPTSPAFSPS 1750 Score = 75.9 bits (185), Expect = 2e-12 Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 19/98 (19%) Frame = -2 Query: 578 FSPSSPYS--PTSPSYSPTSPSYSP-----------------TSPSYSPSSPTYSPSSPY 456 +SP+SP+S PTSP YSPT+ SYSP TSP +SP SP+++P+SP Sbjct: 1568 YSPTSPFSANPTSPGYSPTT-SYSPIAPGITSPRFNTSPGFMTSPGFSPVSPSFAPTSPA 1626 Query: 455 NSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342 S TSP Y +SP SPS YSP+ PG+SP+S + Y+P Sbjct: 1627 YSPTSPAYGQASPT-SPS--YSPTSPGFSPTSPN-YSP 1660 Score = 75.5 bits (184), Expect = 3e-12 Identities = 43/74 (58%), Positives = 50/74 (67%), Gaps = 3/74 (4%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP SPTSP Y+PTSP +SPTSP +YSP+SP + SP+SP TSP YSP+SP FSPS Sbjct: 1694 SPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSP-GGPTSPGYSPTSPAFSPS-- 1750 Query: 395 YSPSQPGYSPSSTS 354 Y P P TS Sbjct: 1751 YVPPPPCLIDDCTS 1764 Score = 58.5 bits (140), Expect = 4e-07 Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSPYSPTSPS-YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 FSP++ TSP+ YSPTSP S +PTSP YSP++ +YSP +P TSP ++ +SP F Sbjct: 1558 FSPAA----TSPAGYSPTSPFSANPTSPGYSPTT-SYSPIAP--GITSPRFN-TSPGFMT 1609 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 S G+SP P ++P+S + Y+P Sbjct: 1610 SPGFSPVSPSFAPTSPA-YSP 1629 [180][TOP] >UniRef100_B3L428 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H RepID=B3L428_PLAKH Length = 2353 Score = 98.6 bits (244), Expect = 3e-19 Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 2/70 (2%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393 S YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP S TSP YSP+SPQ+SP++ Sbjct: 2195 SPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVP 2254 Query: 392 -SPSQPGYSP 366 SPS P YSP Sbjct: 2255 NSPSSPHYSP 2264 Score = 93.6 bits (231), Expect = 1e-17 Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S Y+ TSP YSPTSP YSPTSP Y P+SP YSP+SP S TSP YSP+SP++SP S Y Sbjct: 2188 SPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 2247 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P + S+ Y+P Sbjct: 2248 SPTSPVPNSPSSPHYSP 2264 Score = 90.5 bits (223), Expect = 8e-17 Identities = 47/96 (48%), Positives = 61/96 (63%), Gaps = 15/96 (15%) Frame = -2 Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 +SP+SP +S SP+Y+ TSP YSPTSP YSP+SP Y P+SP S TS Sbjct: 2164 YSPTSPKNQMDEMNPNMMKYHSVLSPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTS 2223 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 P YSP+SP++SP S YSP+ P YSP+S +P + Sbjct: 2224 PKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNSPSS 2259 Score = 84.3 bits (207), Expect = 6e-15 Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP P+SP +SP YSP +SP+ Sbjct: 2218 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPV--PNSP----SSPHYSPYAIASPK 2271 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 FSP S YS S P Y SS ++ Sbjct: 2272 FSPTSPAYSISSPVYDQSSNAR 2293 Score = 59.3 bits (142), Expect = 2e-07 Identities = 48/137 (35%), Positives = 60/137 (43%), Gaps = 59/137 (43%) Frame = -2 Query: 575 SPSSPYSPTSPS--YSPT--------SPSYSPTSPS---------------------YSP 489 SP+ YSP P +SP SPSYSPTSP+ YSP Sbjct: 2107 SPAMLYSPNRPLDIFSPKQQTQNNIYSPSYSPTSPTYHLSSNVNAGGSSGLNDTKAFYSP 2166 Query: 488 ---------------------------SSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 +SP YSP+SP S TSP Y P+SP++SP S Y Sbjct: 2167 TSPKNQMDEMNPNMMKYHSVLSPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKY 2226 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+S +Y+P Sbjct: 2227 SPTSPKYSPTS-PKYSP 2242 Score = 55.1 bits (131), Expect = 4e-06 Identities = 39/107 (36%), Positives = 51/107 (47%), Gaps = 19/107 (17%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSP------------------SYSPTSPSYSPSSPTYSPSSP 459 ++SP+SP YSPTSP YSPTSP +SPTSP+YS SSP Y SS Sbjct: 2232 KYSPTSPKYSPTSPQYSPTSPVPNSPSSPHYSPYAIASPKFSPTSPAYSISSPVYDQSS- 2290 Query: 458 YNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + + P SP + SP Q S ++P N D+ Sbjct: 2291 --NARNRNQHPLSPAYILQ---SPVQVKQHIQDVSVFSPIQQANADE 2332 [181][TOP] >UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis RepID=Q4P7Q0_USTMA Length = 1774 Score = 98.6 bits (244), Expect = 3e-19 Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 10/83 (12%) Frame = -2 Query: 578 FSPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPT---YSPSSP---YNSGTSPDYSP 426 +SP+SP TSPSYSPTSPSYSP SP+YSPSSP YSPSSP Y + TSP YSP Sbjct: 1594 YSPTSPRIFGGATSPSYSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSP 1653 Query: 425 SSPQFSP-STGYSPSQPGYSPSS 360 +SP+FSP S YSP+ P Y+P+S Sbjct: 1654 ASPKFSPTSPNYSPASPAYTPTS 1676 Score = 89.7 bits (221), Expect = 1e-16 Identities = 47/93 (50%), Positives = 62/93 (66%), Gaps = 14/93 (15%) Frame = -2 Query: 578 FSPSSP-----------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS--P 438 +SPSSP YSP SP +SPTSP+YSP SP+Y+P+SP YSP+SP +G Sbjct: 1634 YSPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPASPAYTPTSPVYSPTSPAMAGRGGGK 1693 Query: 437 DYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP+SP +SP S YSP+ P +SP+S QY+P Sbjct: 1694 GFSPTSPAYSPTSPQYSPASPAFSPTS-PQYSP 1725 Score = 85.9 bits (211), Expect = 2e-15 Identities = 48/103 (46%), Positives = 61/103 (59%), Gaps = 24/103 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSP--------------------TSPSYSPTSPSYSPSSPTYSPSS 462 +SP+SP YSP SP+YSP TSP YSP SP +SP+SP YSP+S Sbjct: 1610 YSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPAS 1669 Query: 461 PYNSGTSPDYSPSSPQFS---PSTGYSPSQPGYSPSSTSQYTP 342 P + TSP YSP+SP + G+SP+ P YSP+S QY+P Sbjct: 1670 PAYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTS-PQYSP 1711 Score = 84.0 bits (206), Expect = 8e-15 Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 10/83 (12%) Frame = -2 Query: 578 FSPSSP----------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SP+SP +SPTSP+YSPTSP YSP SP++SP+SP YSP+SP S TSP YS Sbjct: 1679 YSPTSPAMAGRGGGKGFSPTSPAYSPTSPQYSPASPAFSPTSPQYSPASPQYSPTSPQYS 1738 Query: 428 PSSPQFSPSTGYSPSQPGYSPSS 360 P+SP G S PG + +S Sbjct: 1739 PTSPAMGMG-GASAGGPGAAAAS 1760 Score = 72.4 bits (176), Expect = 2e-11 Identities = 43/96 (44%), Positives = 50/96 (52%), Gaps = 24/96 (25%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPS------------------SPTYSPSSP--Y 456 +P SP +SP SP Y PTSP Y+ S SP YSP+SP + Sbjct: 1543 TPLGAQSPAGYGFSPVSPGYVPTSPGYATSPAGALGGMSPWTGNMGATSPAYSPTSPRIF 1602 Query: 455 NSGTSPDYSPSSPQFSP-STGYSPSQP---GYSPSS 360 TSP YSP+SP +SP S YSPS P GYSPSS Sbjct: 1603 GGATSPSYSPTSPSYSPASPNYSPSSPAGAGYSPSS 1638 [182][TOP] >UniRef100_Q2HDK0 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum RepID=Q2HDK0_CHAGB Length = 1756 Score = 98.2 bits (243), Expect = 4e-19 Identities = 53/87 (60%), Positives = 65/87 (74%), Gaps = 6/87 (6%) Frame = -2 Query: 578 FSPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD-YSPSSPQF 411 +SP+SP SPTSPSYSPTSPSYSP SP+ +SP+YSP+SP S TSPD YSP+SP F Sbjct: 1650 YSPTSPQQFNSPTSPSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSF 1709 Query: 410 --SPSTGYSPSQPGYSPSSTSQYTPKT 336 SP SP+ PGYSP+S S ++P+T Sbjct: 1710 HRSPGQQMSPTSPGYSPTSPS-FSPRT 1735 Score = 96.3 bits (238), Expect = 2e-18 Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 24/116 (20%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSP-------------YNS 450 R++ S +SP+SPS+SPTSP SPTSP+YSP+SP+YSP+SP +NS Sbjct: 1601 RYASSPQFSPSSPSFSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNS 1660 Query: 449 GTSPDYSPSSPQFSP--------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306 TSP YSP+SP +SP S YSP+ P +SP+S Y+P + PG Q Sbjct: 1661 PTSPSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQ 1716 Score = 91.7 bits (226), Expect = 4e-17 Identities = 51/105 (48%), Positives = 63/105 (60%), Gaps = 26/105 (24%) Frame = -2 Query: 578 FSPSSPY----SPTSPSYSPTSPSYSP--------------------TSPSYSPSSPTYS 471 FSP+SP SPTSP+YSPTSPSYSP TSPSYSP+SP+YS Sbjct: 1615 FSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNSPTSPSYSPTSPSYS 1674 Query: 470 PSSPYNSGTSPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 342 P+SP TSP YSP+SP +SP++ YSP+ P + S Q +P Sbjct: 1675 PASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSP 1719 Score = 64.7 bits (156), Expect = 5e-09 Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 21/88 (23%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSP-SYSPTSPSY--------SPSSPTYSPSSPYNS 450 +SP+SP YSP SP++SPTSP +YSPTSPS+ SP+SP YSP Sbjct: 1673 YSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSPTSPGYSP------ 1726 Query: 449 GTSPDYSPSSPQFSPSTG----YSPSQP 378 TSP +SP +P PS G YSP+ P Sbjct: 1727 -TSPSFSPRTPGRGPSGGSGDQYSPTSP 1753 [183][TOP] >UniRef100_B8M2Y2 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8M2Y2_TALSN Length = 1755 Score = 98.2 bits (243), Expect = 4e-19 Identities = 54/111 (48%), Positives = 65/111 (58%), Gaps = 23/111 (20%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 FSPSSP YSPTSPSY SPSYSPTSP +SPSSP YSPSSP S +SP +SP+ Sbjct: 1606 FSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPT 1665 Query: 422 SPQFSP---------------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP +SP S YSP+ P +SP+S Y+P + + P Sbjct: 1666 SPTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSPTSPEIYSPTSPNIHGSP 1716 Score = 90.5 bits (223), Expect = 8e-17 Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 6/89 (6%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS-P 405 RF S +SP+SP++ TSP+YSPTSPSY +SP+YSP+SP S +SP+YSPSSP S Sbjct: 1599 RFVTSPGFSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLS 1658 Query: 404 STGYSPSQPGYSPSS-----TSQYTPKTN 333 S +SP+ P YSP+S T Q++ T+ Sbjct: 1659 SPAFSPTSPTYSPTSPAIGGTRQFSSPTS 1687 Score = 80.1 bits (196), Expect = 1e-13 Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 25/104 (24%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-------YNSGTSPDYSPS 423 +SP+SP +SP+SP+YSP+SP+ S +SP++SP+SPTYSP+SP ++S TSP YSP+ Sbjct: 1634 YSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPA 1693 Query: 422 SPQFSPSTGY-----------SPSQP---GYSPS---STSQYTP 342 SP +SP++ SP+ P G SPS ++ QY P Sbjct: 1694 SPAWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNP 1737 Score = 76.3 bits (186), Expect = 2e-12 Identities = 47/112 (41%), Positives = 59/112 (52%), Gaps = 39/112 (34%) Frame = -2 Query: 581 RFSPSSP---------------YSPTSPSYSPTSPSY-------SPTSPSYSPSSPTY-- 474 RFSPSSP +SPTSP+YSPTSP+ SPTSP YSP+SP + Sbjct: 1640 RFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSP 1699 Query: 473 ---------------SPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPS 363 SP+SP GTSP YSP+SPQ++P+ Y + PG P+ Sbjct: 1700 TSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNPT--YVYTNPGEVPA 1749 Score = 72.8 bits (177), Expect = 2e-11 Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 24/99 (24%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSP-------TSPSYSPTSPSYSPSSPTYSPSSP----- 459 +SP+SP YSPTSP +SP +SP+ S +SP++SP+SPTYSP+SP Sbjct: 1620 YSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGT 1679 Query: 458 --YNSGTSPDYSPSSPQFSPSTG--YSPSQPGYSPSSTS 354 ++S TSP YSP+SP +SP++ YSP+ P S TS Sbjct: 1680 RQFSSPTSPKYSPASPAWSPTSPEIYSPTSPNIHGSPTS 1718 Score = 59.3 bits (142), Expect = 2e-07 Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 4/67 (5%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPS-YSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 SP+SP YSP SP++SPTSP YSPTSP+ SP+SP +SP S TSP Y+P+ + Sbjct: 1684 SPTSPKYSPASPAWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNPTYVYTN 1743 Query: 407 PSTGYSP 387 P +P Sbjct: 1744 PGEVPAP 1750 [184][TOP] >UniRef100_Q0D054 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0D054_ASPTN Length = 1742 Score = 97.8 bits (242), Expect = 5e-19 Identities = 51/93 (54%), Positives = 63/93 (67%), Gaps = 14/93 (15%) Frame = -2 Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-- 417 +SP+SP SPTSPSYSPTSP +SPTSP+YSP+SP SP+SP S TSP YSP+SP Sbjct: 1620 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPSYSPTSPAL 1679 Query: 416 ----QFSP----STGYSPSQPGYSPSSTSQYTP 342 SP S Y+P+ PG+SP+S Y+P Sbjct: 1680 GAGRNMSPTSPTSPKYTPTSPGWSPTSPQSYSP 1712 Score = 90.9 bits (224), Expect = 7e-17 Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 17/90 (18%) Frame = -2 Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSY---SPSSPTYSPSSPYNSG 447 +SP+SP +SP SP++ PTSP+YSPTSP+Y SP+SP+YSP+SP S Sbjct: 1587 YSPTSPGMGITSPRMTSPGFSPASPAFGPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSP 1646 Query: 446 TSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360 TSP+YSP+SP SP S +SP+ P YSP+S Sbjct: 1647 TSPNYSPTSPNLSPASPVFSPTSPSYSPTS 1676 Score = 86.3 bits (212), Expect = 2e-15 Identities = 51/95 (53%), Positives = 64/95 (67%), Gaps = 16/95 (16%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTY---------SPSSPYNSGTSPDYS 429 FSP+SP YSPTSP+ SP SP +SPTSPSYSP+SP SP+SP + TSP +S Sbjct: 1644 FSPTSPNYSPTSPNLSPASPVFSPTSPSYSPTSPALGAGRNMSPTSPTSPKYTPTSPGWS 1703 Query: 428 PSSPQF----SPSTGYSPSQPG--YSPSSTSQYTP 342 P+SPQ SP+ G SP+ PG YSP+S + Y+P Sbjct: 1704 PTSPQSYSPTSPNIGGSPTSPGGAYSPTSPT-YSP 1737 Score = 77.4 bits (189), Expect = 7e-13 Identities = 43/79 (54%), Positives = 54/79 (68%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SPSS YSPTSP TSP TSP +SP+SP + P+SP S TSP Y +SP SPS Sbjct: 1581 YSPSSSYSPTSPGMGITSPRM--TSPGFSPASPAFGPTSPAYSPTSPAYGQASPT-SPS- 1636 Query: 398 GYSPSQPGYSPSSTSQYTP 342 YSP+ PG+SP+S + Y+P Sbjct: 1637 -YSPTSPGFSPTSPN-YSP 1653 Score = 75.5 bits (184), Expect = 3e-12 Identities = 47/88 (53%), Positives = 56/88 (63%), Gaps = 13/88 (14%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSY------SPTSPSYSPSSPTYSPSSPYNSGTSP-DYSPSS 420 SP+SP +SPTSPSYSPTSP+ SPT SP+SP Y+P+SP S TSP YSP+S Sbjct: 1659 SPASPVFSPTSPSYSPTSPALGAGRNMSPT----SPTSPKYTPTSPGWSPTSPQSYSPTS 1714 Query: 419 PQF-----SPSTGYSPSQPGYSPSSTSQ 351 P SP YSP+ P YSP+S Q Sbjct: 1715 PNIGGSPTSPGGAYSPTSPTYSPTSPRQ 1742 [185][TOP] >UniRef100_A6SI63 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SI63_BOTFB Length = 1742 Score = 97.4 bits (241), Expect = 7e-19 Identities = 56/103 (54%), Positives = 68/103 (66%), Gaps = 19/103 (18%) Frame = -2 Query: 578 FSPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTY-----------SPSSPYNSGTS 441 +SP+SP SPTSPSYSPTSPSYSPTSP+YSP+SP Y SP+SP S TS Sbjct: 1640 YSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTS 1699 Query: 440 PDYSPSSPQF---SPSTGYSPSQPGYSPSST--SQYTPKTNDN 327 P++SPSSPQ S S YSP+ P YSP+S S +P+ +N Sbjct: 1700 PNWSPSSPQHQGNSTSPKYSPTSPSYSPTSPNFSPTSPRGGNN 1742 Score = 94.4 bits (233), Expect = 6e-18 Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 16/104 (15%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 +SP+SP SPTSPSYSPTSP+YSPTSP+ SP+SP+YSP+SP S TSP+YSP+SP + Sbjct: 1618 YSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNY 1677 Query: 410 -----SPSTG-------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP +G YSP+ P +SPSS P+ N P Sbjct: 1678 AGNKVSPGSGLSPTSPVYSPTSPNWSPSS-----PQHQGNSTSP 1716 Score = 90.5 bits (223), Expect = 8e-17 Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 17/96 (17%) Frame = -2 Query: 578 FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TS 441 +SP+SP YSPTSP+ SPTSPSYSPTSPSYSP+SP YSP+SP +G TS Sbjct: 1633 YSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTS 1692 Query: 440 PDYSPSSPQFSPSTGY---SPSQPGYSPSSTSQYTP 342 P YSP+SP +SPS+ + + P YSP+S S Y+P Sbjct: 1693 PVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPS-YSP 1727 Score = 87.4 bits (215), Expect = 7e-16 Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 36/126 (28%) Frame = -2 Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPT---------------------SPSYSPSSPTYSP 468 +SP+SP+ SP+SP++SP+SP YSPT SP+++P+SP YSP Sbjct: 1561 YSPTSPFNASPSSPNFSPSSPGYSPTSPMMGGGASPGYAVSPRFSPVSPAFTPTSPAYSP 1620 Query: 467 SSP-YNSGTSPDYSPSSPQFSP----------STGYSPSQPGYSPSST--SQYTPKTNDN 327 +SP + S TSP YSP+SP +SP S YSP+ P YSP+S S +P N Sbjct: 1621 TSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGN 1680 Query: 326 KDDPGT 309 K PG+ Sbjct: 1681 KVSPGS 1686 Score = 70.1 bits (170), Expect = 1e-10 Identities = 33/58 (56%), Positives = 45/58 (77%), Gaps = 2/58 (3%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 + SP S SPTSP YSPTSP++SP+SP + + +SP YSP+SP S TSP++SP+SP+ Sbjct: 1681 KVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPSYSPTSPNFSPTSPR 1738 [186][TOP] >UniRef100_C6F1F1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax RepID=C6F1F1_PLAVI Length = 211 Score = 96.7 bits (239), Expect = 1e-18 Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 2/70 (2%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393 S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SPS+ Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 112 Query: 392 -SPSQPGYSP 366 +PS P YSP Sbjct: 113 NNPSSPHYSP 122 Score = 89.0 bits (219), Expect = 2e-16 Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 15/94 (15%) Frame = -2 Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 +SP+SP +S SP YS TSP YSPTSP YSP+SP YSP+SP S TS Sbjct: 29 YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 88 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SP++SP S YSPS P + S+ Y+P Sbjct: 89 PKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 122 Score = 82.8 bits (203), Expect = 2e-14 Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414 ++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP P++P +SP YSP +SP+ Sbjct: 76 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 129 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 FSP S YS S P Y S ++ Sbjct: 130 FSPTSPAYSISSPVYDQSGNAR 151 Score = 79.0 bits (193), Expect = 3e-13 Identities = 46/99 (46%), Positives = 55/99 (55%), Gaps = 21/99 (21%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 450 SS + T YSPTSP+ YS TSP YSP+SP YSP+SP S Sbjct: 19 SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYS 78 Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 TSP YSP+SP++SP S YSP+ P YSPSS P + Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 117 [187][TOP] >UniRef100_A5K7P4 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax RepID=A5K7P4_PLAVI Length = 2379 Score = 96.7 bits (239), Expect = 1e-18 Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 2/70 (2%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393 S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SPS+ Sbjct: 2221 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 2280 Query: 392 -SPSQPGYSP 366 +PS P YSP Sbjct: 2281 NNPSSPHYSP 2290 Score = 89.0 bits (219), Expect = 2e-16 Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 15/94 (15%) Frame = -2 Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 +SP+SP +S SP YS TSP YSPTSP YSP+SP YSP+SP S TS Sbjct: 2197 YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 2256 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SP++SP S YSPS P + S+ Y+P Sbjct: 2257 PKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 2290 Score = 82.8 bits (203), Expect = 2e-14 Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414 ++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP P++P +SP YSP +SP+ Sbjct: 2244 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 2297 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 FSP S YS S P Y S ++ Sbjct: 2298 FSPTSPAYSISSPVYDQSGNAR 2319 Score = 62.4 bits (150), Expect = 2e-08 Identities = 50/139 (35%), Positives = 62/139 (44%), Gaps = 59/139 (42%) Frame = -2 Query: 575 SPSSPYSPTSPS--YSPT--------SPSYSPTSPS---------------------YSP 489 SP+ YSP +SP SPSYSPTSP+ YSP Sbjct: 2140 SPAMLYSPNRALDLFSPKQQTQNNIYSPSYSPTSPTYHLTNPASGGGSSGLNGTKAYYSP 2199 Query: 488 SSPT---------------------------YSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 +SPT YSP+SP S TSP YSP+SP++SP S Y Sbjct: 2200 TSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2259 Query: 392 SPSQPGYSPSSTSQYTPKT 336 SP+ P YSP+S QY+P + Sbjct: 2260 SPTSPKYSPTS-PQYSPSS 2277 [188][TOP] >UniRef100_UPI000023F34A hypothetical protein FG00916.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023F34A Length = 1758 Score = 96.3 bits (238), Expect = 2e-18 Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 29/121 (23%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSP---SYSPSSPTYSPSSP-------------YN 453 R+ P+SP +SP+SPS+SPTSP PTSP SYSP+SP+YSP+SP +N Sbjct: 1601 RYGPTSPSFSPSSPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFN 1660 Query: 452 SGTSPDYSPSSPQFSP------------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309 S TSP YSP+SP +SP S YSP+ P +SP+S Y+P + + P T Sbjct: 1661 SPTSPSYSPASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTT 1720 Query: 308 Q 306 Q Sbjct: 1721 Q 1721 Score = 93.2 bits (230), Expect = 1e-17 Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 20/98 (20%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSY-------------SPTSPSYSPSSPTYSPSSPYNSG--- 447 SP+SP YSPTSPSYSPTSPS SPTSPSYSP+SP YSP+SP G Sbjct: 1627 SPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPTSPSYSPASPNYSPTSPNVHGAGG 1686 Query: 446 -TSPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTP 342 TSP YSP+SP +SP++ YSP+ P + S T+Q +P Sbjct: 1687 PTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSP 1724 Score = 92.0 bits (227), Expect = 3e-17 Identities = 54/100 (54%), Positives = 70/100 (70%), Gaps = 10/100 (10%) Frame = -2 Query: 578 FSPSSPY---SPTSPSYSPTSPSYSPTSPSY----SPSSPTYSPSSPYNSGTSPD-YSPS 423 +SP+SP SPTSPSYSP SP+YSPTSP+ P+SP+YSP+SP S TSP+ YSP+ Sbjct: 1651 YSPTSPAQFNSPTSPSYSPASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPT 1710 Query: 422 SPQF--SPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309 SP F SP+T SP+ P YSP+S + ++P+T PGT Sbjct: 1711 SPTFQRSPTTQQSPTSPSYSPTSPA-FSPRT----PGPGT 1745 Score = 67.0 bits (162), Expect = 1e-09 Identities = 46/113 (40%), Positives = 58/113 (51%), Gaps = 25/113 (22%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPT--YSPSSPYNSG--------TSPDY 432 F ++P SP + + S SPTSP SYSP+SP YSP+SP G TSP + Sbjct: 1550 FGGTTPMSPYNRGAASPFSSTSPTSPFSYSPTSPNMGYSPTSPLIDGGGMGRYGPTSPSF 1609 Query: 431 SPSSPQFSP-----------STGYSPSQPGYSPSSTS---QYTPKTNDNKDDP 315 SPSSP FSP S YSP+ P YSP+S S Y+P + + P Sbjct: 1610 SPSSPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSP 1662 Score = 64.3 bits (155), Expect = 7e-09 Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 10/64 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSP-SYSPTSPSY--------SPTSPSYSPSSPTYSPSSPYNSGTSPDYS 429 +SP+SP +SPTSP +YSPTSP++ SPTSPSYSP+SP +SP +P + YS Sbjct: 1692 YSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSPTSPSYSPTSPAFSPRTPGPGTSGNQYS 1751 Query: 428 PSSP 417 P+SP Sbjct: 1752 PNSP 1755 Score = 63.5 bits (153), Expect = 1e-08 Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 10/68 (14%) Frame = -2 Query: 572 PSSP-YSPTSPSYSPTSP-SYSPTSPSY--------SPSSPTYSPSSPYNSGTSPDYSPS 423 P+SP YSP SPS+SPTSP +YSPTSP++ SP+SP+YSP+SP S +P S Sbjct: 1687 PTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSPTSPSYSPTSPAFSPRTPGPGTS 1746 Query: 422 SPQFSPST 399 Q+SP++ Sbjct: 1747 GNQYSPNS 1754 Score = 54.3 bits (129), Expect = 7e-06 Identities = 24/41 (58%), Positives = 30/41 (73%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN 453 SP++ SPTSPSYSPTSP++SP +P S YSP+SP N Sbjct: 1717 SPTTQQSPTSPSYSPTSPAFSPRTPGPGTSGNQYSPNSPSN 1757 [189][TOP] >UniRef100_C6F0A4 RNA polymerase II (Fragment) n=2 Tax=Plasmodium (Laverania) RepID=C6F0A4_PLAFA Length = 202 Score = 96.3 bits (238), Expect = 2e-18 Identities = 47/76 (61%), Positives = 58/76 (76%), Gaps = 3/76 (3%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP+ Sbjct: 40 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 99 Query: 401 T--GYSPSQPGYSPSS 360 + + + P YSP S Sbjct: 100 SPVAQNIASPNYSPYS 115 Score = 94.4 bits (233), Expect = 6e-18 Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 96 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P ++ Y+P Sbjct: 97 SPTSPVAQNIASPNYSP 113 Score = 93.2 bits (230), Expect = 1e-17 Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 1/71 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 +S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89 Query: 392 SPSQPGYSPSS 360 SP+ P YSP+S Sbjct: 90 SPTSPKYSPTS 100 Score = 83.6 bits (205), Expect = 1e-14 Identities = 48/99 (48%), Positives = 61/99 (61%), Gaps = 20/99 (20%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPS------------------YSPTSPSYSPSSPTYSPSSPY 456 +SP+SP Y+ + YSPTSP YS TSP YSP+SP YSP+SP Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60 Query: 455 NSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 S TSP YSP+SP++SP S YSP+ P YSP+S +Y+P Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 98 Score = 80.1 bits (196), Expect = 1e-13 Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S TSP Sbjct: 67 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 126 Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330 YS SSP + S + P P Y S Q D Sbjct: 127 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 165 [190][TOP] >UniRef100_A7EKT1 DNA-directed RNA polymerase n=2 Tax=Sclerotinia sclerotiorum RepID=A7EKT1_SCLS1 Length = 1746 Score = 96.3 bits (238), Expect = 2e-18 Identities = 55/103 (53%), Positives = 68/103 (66%), Gaps = 19/103 (18%) Frame = -2 Query: 578 FSPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTY-----------SPSSPYNSGTS 441 +SP+SP SPTSPSYSPTSPSYSPTSP+YSP+SP Y SP+SP S TS Sbjct: 1644 YSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTS 1703 Query: 440 PDYSPSSPQF---SPSTGYSPSQPGYSPSST--SQYTPKTNDN 327 P++SPSSPQ + S YSP+ P YSP+S S +P+ +N Sbjct: 1704 PNWSPSSPQHQGNNTSPKYSPTSPSYSPTSPNFSPTSPRGGNN 1746 Score = 94.4 bits (233), Expect = 6e-18 Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 16/104 (15%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 +SP+SP SPTSPSYSPTSP+YSPTSP+ SP+SP+YSP+SP S TSP+YSP+SP + Sbjct: 1622 YSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNY 1681 Query: 410 -----SPSTG-------YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP +G YSP+ P +SPSS P+ N P Sbjct: 1682 AGNKVSPGSGLSPTSPVYSPTSPNWSPSS-----PQHQGNNTSP 1720 Score = 90.1 bits (222), Expect = 1e-16 Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 17/96 (17%) Frame = -2 Query: 578 FSPSSP-YSPTSPSY--SPTSPSYSPTSPSYSPSSPTYSPSSPYNSG-----------TS 441 +SP+SP YSPTSP+ SPTSPSYSPTSPSYSP+SP YSP+SP +G TS Sbjct: 1637 YSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTS 1696 Query: 440 PDYSPSSPQFSPSTGY---SPSQPGYSPSSTSQYTP 342 P YSP+SP +SPS+ + + P YSP+S S Y+P Sbjct: 1697 PVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPS-YSP 1731 Score = 88.6 bits (218), Expect = 3e-16 Identities = 53/126 (42%), Positives = 70/126 (55%), Gaps = 36/126 (28%) Frame = -2 Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPT---------------------SPSYSPSSPTYSP 468 +SP+SP+ SPTSP +SP+SP YSPT SP+++P+SP YSP Sbjct: 1565 YSPTSPFNASPTSPQFSPSSPGYSPTSPMMGGGASPGYSVSPRFSPVSPAFTPTSPAYSP 1624 Query: 467 SSP-YNSGTSPDYSPSSPQFSP----------STGYSPSQPGYSPSST--SQYTPKTNDN 327 +SP + S TSP YSP+SP +SP S YSP+ P YSP+S S +P N Sbjct: 1625 TSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGN 1684 Query: 326 KDDPGT 309 K PG+ Sbjct: 1685 KVSPGS 1690 Score = 69.7 bits (169), Expect = 2e-10 Identities = 33/58 (56%), Positives = 45/58 (77%), Gaps = 2/58 (3%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 + SP S SPTSP YSPTSP++SP+SP + + +SP YSP+SP S TSP++SP+SP+ Sbjct: 1685 KVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPSYSPTSPNFSPTSPR 1742 [191][TOP] >UniRef100_P14248 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Plasmodium falciparum CDC/Honduras RepID=RPB1_PLAFD Length = 2452 Score = 96.3 bits (238), Expect = 2e-18 Identities = 47/76 (61%), Positives = 58/76 (76%), Gaps = 3/76 (3%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +S +SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP+ Sbjct: 2290 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2349 Query: 401 T--GYSPSQPGYSPSS 360 + + + P YSP S Sbjct: 2350 SPVAQNIASPNYSPYS 2365 Score = 94.4 bits (233), Expect = 6e-18 Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y Sbjct: 2287 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2346 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P ++ Y+P Sbjct: 2347 SPTSPVAQNIASPNYSP 2363 Score = 93.2 bits (230), Expect = 1e-17 Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 1/71 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 +S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y Sbjct: 2280 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2339 Query: 392 SPSQPGYSPSS 360 SP+ P YSP+S Sbjct: 2340 SPTSPKYSPTS 2350 Score = 80.1 bits (196), Expect = 1e-13 Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S TSP Sbjct: 2317 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 2376 Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330 YS SSP + S + P P Y S Q D Sbjct: 2377 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 2415 Score = 78.2 bits (191), Expect = 4e-13 Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 12/91 (13%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDY 432 +SPS YSPTSP+Y+ + YSPTSP Y+ SP YS +SP S TSP Y Sbjct: 2247 YSPS--YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKY 2304 Query: 431 SPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP+SP++SP S YSP+ P YSP+S +Y+P Sbjct: 2305 SPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2334 Score = 77.4 bits (189), Expect = 7e-13 Identities = 47/110 (42%), Positives = 59/110 (53%), Gaps = 33/110 (30%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPS--------------------------------YSPTSPSYSP 489 P ++ SPSYSPTSP+ YS TSP YSP Sbjct: 2240 PQINHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSP 2299 Query: 488 SSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 +SP YSP+SP S TSP YSP+SP++SP S YSP+ P YSP+S +Y+P Sbjct: 2300 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS-PKYSP 2348 [192][TOP] >UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SR21_9PEZI Length = 1756 Score = 95.5 bits (236), Expect = 3e-18 Identities = 56/113 (49%), Positives = 70/113 (61%), Gaps = 21/113 (18%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPS---YSPTSPSYSPSSPT----YSPSSP--YNSGTSPDY 432 +FSPSSP +SPTSP + PTSP+ YSPTSPSYSP+SPT YSP+SP +NS TSP Y Sbjct: 1606 QFSPSSPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSY 1665 Query: 431 SPSSPQFSP-----------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306 SP+SP +SP S YSP+ P +SP+S T+ + P Q Sbjct: 1666 SPASPSYSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHSYSPTSPSFQRPAMQ 1718 Score = 90.1 bits (222), Expect = 1e-16 Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 20/109 (18%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPS---YSPSSPTYSPSSP-------------YNS 450 R++ S +SP+SPS+SPTSP + PTSP+ YSP+SP+YSP+SP +NS Sbjct: 1600 RYATSPQFSPSSPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNS 1659 Query: 449 GTSPDYSPSSPQFSPST----GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 TSP YSP+SP +SP++ G P+ P YSP+S S ++P + ++ P Sbjct: 1660 PTSPSYSPASPSYSPTSPNLHGAGPTSPSYSPASPS-WSPTSPEHSYSP 1707 Score = 88.2 bits (217), Expect = 4e-16 Identities = 51/107 (47%), Positives = 64/107 (59%), Gaps = 20/107 (18%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSY-------------SPTSPSYSPSSPTYSPSSPYNSG--- 447 SP+SP YSPTSPSYSPTSP+ SPTSPSYSP+SP+YSP+SP G Sbjct: 1625 SPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYSPASPSYSPTSPNLHGAGP 1684 Query: 446 TSPDYSPSSPQFSPST---GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 TSP YSP+SP +SP++ YSP+ P + + Q N + P Sbjct: 1685 TSPSYSPASPSWSPTSPEHSYSPTSPSFQRPAMQQSPTSPNYSPTSP 1731 Score = 86.7 bits (213), Expect = 1e-15 Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 5/85 (5%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 SP+SP YSP SPSYSPTSP+ PTSPSYSP+SP++SP+SP +S YSP+SP F Sbjct: 1659 SPTSPSYSPASPSYSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHS-----YSPTSPSFQ 1713 Query: 407 -PSTGYSPSQPGYSPSSTSQYTPKT 336 P+ SP+ P YSP+S S ++P+T Sbjct: 1714 RPAMQQSPTSPNYSPTSPS-FSPRT 1737 Score = 62.0 bits (149), Expect = 3e-08 Identities = 42/89 (47%), Positives = 53/89 (59%), Gaps = 9/89 (10%) Frame = -2 Query: 581 RFSPSSPY--SPTSPSYS-PTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSP 417 R +SP+ SPTSP S + YSPTSP YSP+SP + Y TSP +SPSSP Sbjct: 1555 RAGATSPFTTSPTSPFSSFAGAGGYSPTSPGGGYSPTSPLMDGGARY--ATSPQFSPSSP 1612 Query: 416 QFSPSTGY----SPSQPGYSPSSTSQYTP 342 FSP++ SP+ P YSP+S S Y+P Sbjct: 1613 SFSPTSPVHRPTSPASPNYSPTSPS-YSP 1640 Score = 59.7 bits (143), Expect = 2e-07 Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 10/55 (18%) Frame = -2 Query: 578 FSPSSP-YSPTSP--SYSPTSPSY-------SPTSPSYSPSSPTYSPSSPYNSGT 444 +SP+SP +SPTSP SYSPTSPS+ SPTSP+YSP+SP++SP +P SG+ Sbjct: 1689 YSPASPSWSPTSPEHSYSPTSPSFQRPAMQQSPTSPNYSPTSPSFSPRTPGPSGS 1743 [193][TOP] >UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2W4S0_PYRTR Length = 1742 Score = 94.7 bits (234), Expect = 5e-18 Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 8/88 (9%) Frame = -2 Query: 581 RFSPSSP---YSPTSPSYSPTSPSY-SPTSPSYSPSSPT-YSPSSPYNSGTSPDYSPSSP 417 RF+ +SP SPTSP YSPTSP Y SPTSPSYSP+SP YSP+SP S TSP+YSP+SP Sbjct: 1595 RFAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSP 1654 Query: 416 QF---SPSTGYSPSQPGYSPSSTSQYTP 342 F + S YSP+ P YSP+S QY+P Sbjct: 1655 TFMGGATSPAYSPTSPQYSPTS-PQYSP 1681 Score = 92.0 bits (227), Expect = 3e-17 Identities = 50/88 (56%), Positives = 61/88 (69%), Gaps = 15/88 (17%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSY--SPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 +SP+SP YSPTSP YSPTSP+YSPTSP++ +SP YSP+SP S TSP YSP+SPQ+ Sbjct: 1627 YSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTSPQY 1686 Query: 410 -------SP----STGYSPSQPGYSPSS 360 SP S YSP+ P YSP+S Sbjct: 1687 QATSDRRSPTSPTSPQYSPTSPRYSPTS 1714 Score = 91.3 bits (225), Expect = 5e-17 Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 5/78 (6%) Frame = -2 Query: 578 FSPSSPY--SPTSPSYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNSG--TSPDYSPSSPQ 414 +SP+SP SPTSPSYSPTSP+ YSPTSP YSP+SP YSP+SP G TSP YSP+SPQ Sbjct: 1612 YSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQ 1671 Query: 413 FSPSTGYSPSQPGYSPSS 360 YSP+ P YSP+S Sbjct: 1672 ------YSPTSPQYSPTS 1683 Score = 88.6 bits (218), Expect = 3e-16 Identities = 55/102 (53%), Positives = 64/102 (62%), Gaps = 25/102 (24%) Frame = -2 Query: 581 RFSPSSP-YSPTSPS---------YSPTSPSYSPTSPSYSPSSPTY----------SPSS 462 ++SP+SP YSPTSP+ YSPTSP YSPTSP YSP+SP Y SP+S Sbjct: 1641 QYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTSPQYQATSDRRSPTSPTS 1700 Query: 461 PYNSGTSPDYSPSSP--QFSP-STGYSPSQPG--YSPSSTSQ 351 P S TSP YSP+SP FSP S YSP+ PG YSP+S Q Sbjct: 1701 PQYSPTSPRYSPTSPAGSFSPTSPRYSPTSPGPAYSPTSPKQ 1742 Score = 79.0 bits (193), Expect = 3e-13 Identities = 45/87 (51%), Positives = 53/87 (60%), Gaps = 15/87 (17%) Frame = -2 Query: 557 SPTSPSYSPTSPSYSPTSPS--------------YSPSSPTYSPSSP-YNSGTSPDYSPS 423 SP SP +SPTSP YSPTSP SP+SP YSP+SP Y S TSP YSP+ Sbjct: 1571 SPVSPGFSPTSPGYSPTSPGTASPRFAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSPT 1630 Query: 422 SPQFSPSTGYSPSQPGYSPSSTSQYTP 342 SP GYSP+ P YSP+S + Y+P Sbjct: 1631 SP-----AGYSPTSPQYSPTSPN-YSP 1651 [194][TOP] >UniRef100_C7YI77 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YI77_NECH7 Length = 1750 Score = 94.0 bits (232), Expect = 8e-18 Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 27/119 (22%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPS---YSPSSPTYSPSSP-------------YNS 450 R++ S +SP+SPS+SPTSP PTSP+ YSPSSP YSP+SP +NS Sbjct: 1596 RYATSPSFSPSSPSFSPTSPMVRPTSPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNS 1655 Query: 449 GTSPDYSPSSPQFSP-----------STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306 TSP+YSP+SP +SP S YSP+ P +SP+S Y+P T+ + PG Q Sbjct: 1656 PTSPNYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSP-TSPYQRSPGAQ 1713 Score = 83.6 bits (205), Expect = 1e-14 Identities = 50/107 (46%), Positives = 63/107 (58%), Gaps = 22/107 (20%) Frame = -2 Query: 578 FSPSSPY---SPTSPSYSPTSPSYSP----------TSPSYSPSSPT--------YSPSS 462 +SP+SP SPTSP+YSP SP+YSP TSPSYSP+SPT YSP+S Sbjct: 1645 YSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSPTS 1704 Query: 461 PYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNK 324 PY SP+SP +SP S +SP PG SS +QY+P + N+ Sbjct: 1705 PYQRSPGAQQSPTSPSYSPTSPAFSPRTPG-PGSSGNQYSPNSPSNE 1750 Score = 82.8 bits (203), Expect = 2e-14 Identities = 49/96 (51%), Positives = 61/96 (63%), Gaps = 12/96 (12%) Frame = -2 Query: 578 FSPSSPYSPTSPS-YSPTSPSYS-------PTSPSYSPSSPTYSPSSPY---NSGTSPDY 432 F P YSPTSP+ YSPTSP TSPS+SPSSP++SP+SP S SP+Y Sbjct: 1568 FGPGGGYSPTSPNAYSPTSPLVDGGMGGRYATSPSFSPSSPSFSPTSPMVRPTSPASPNY 1627 Query: 431 SPSSPQFSPSTGYSPSQP-GYSPSSTSQYTPKTNDN 327 SPSSP +SP+ SPS P YSP+S +Q+ T+ N Sbjct: 1628 SPSSPNYSPA---SPSSPRHYSPTSPAQFNSPTSPN 1660 [195][TOP] >UniRef100_C6F1F6 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax RepID=C6F1F6_PLAVI Length = 211 Score = 93.6 bits (231), Expect = 1e-17 Identities = 46/70 (65%), Positives = 52/70 (74%), Gaps = 2/70 (2%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393 S YS TSP SPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SPQ+SPS+ Sbjct: 53 SPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP 112 Query: 392 -SPSQPGYSP 366 +PS P YSP Sbjct: 113 NNPSSPHYSP 122 Score = 85.9 bits (211), Expect = 2e-15 Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%) Frame = -2 Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 +SP+SP +S SP YS TSP SPTSP YSP+SP YSP+SP S TS Sbjct: 29 YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTS 88 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SP++SP S YSPS P + S+ Y+P Sbjct: 89 PKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 122 Score = 82.8 bits (203), Expect = 2e-14 Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP---SSPQ 414 ++SP+SP YSPTSP YSPTSP YSPTSP YSPSSP P++P +SP YSP +SP+ Sbjct: 76 KYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPV--PNNP----SSPHYSPYAIASPK 129 Query: 413 FSP-STGYSPSQPGYSPSSTSQ 351 FSP S YS S P Y S ++ Sbjct: 130 FSPTSPAYSISSPVYDQSGNAR 151 Score = 75.9 bits (185), Expect = 2e-12 Identities = 45/99 (45%), Positives = 54/99 (54%), Gaps = 21/99 (21%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPS--------------------YSPTSPSYSPSSPTYSPSSPYNS 450 SS + T YSPTSP+ YS TSP SP+SP YSP+SP S Sbjct: 19 SSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKXSPTSPKYSPTSPKYS 78 Query: 449 GTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 TSP YSP+SP++SP S YSP+ P YSPSS P + Sbjct: 79 PTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSS 117 [196][TOP] >UniRef100_C6F1F5 RNA polymerase II (Fragment) n=1 Tax=Plasmodium fragile RepID=C6F1F5_PLAFR Length = 210 Score = 93.6 bits (231), Expect = 1e-17 Identities = 45/70 (64%), Positives = 52/70 (74%), Gaps = 2/70 (2%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY- 393 S YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S TSP YSP+SPQ+SP++ Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIP 112 Query: 392 -SPSQPGYSP 366 +PS P YSP Sbjct: 113 NNPSSPHYSP 122 Score = 92.4 bits (228), Expect = 2e-17 Identities = 49/83 (59%), Positives = 61/83 (73%), Gaps = 6/83 (7%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPY-NSGTSPDYSP---SSP 417 ++SP+SP Y PTSP YSPTSP YSPTSP YSP+SP YSP+SP N+ +SP YSP +SP Sbjct: 69 KYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSPYAIASP 128 Query: 416 QFSP-STGYSPSQPGYSPSSTSQ 351 +FSP S YS S P Y S+ ++ Sbjct: 129 KFSPTSPAYSISSPVYDRSANAR 151 Score = 85.5 bits (210), Expect = 3e-15 Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 15/94 (15%) Frame = -2 Query: 578 FSPSSP--------------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTS 441 +SP+SP +S SP YS TSP YSPTSP YSP+SP Y P+SP S TS Sbjct: 29 YSPTSPTNQLGEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTS 88 Query: 440 PDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 P YSP+SP++SP S YSP+ P + S+ Y+P Sbjct: 89 PKYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSP 122 Score = 75.1 bits (183), Expect = 4e-12 Identities = 47/117 (40%), Positives = 57/117 (48%), Gaps = 42/117 (35%) Frame = -2 Query: 560 YSPTSPS---------------------YSPTSPS--------------------YSPTS 504 YSPTSP+ YSPTSP+ YS TS Sbjct: 1 YSPTSPTYHLSNNANAGGSAGLNDPKSFYSPTSPTNQLGEMNPNMMKYHSVVSPVYSVTS 60 Query: 503 PSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTSQYTPKT 336 P YSP+SP YSP+SP TSP YSP+SP++SP S YSP+ P YSP+S P + Sbjct: 61 PKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSS 117 Score = 53.9 bits (128), Expect = 9e-06 Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 19/107 (17%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSP------------------SYSPTSPSYSPSSPTYSPSSP 459 ++SP+SP YSPTSP YSPTSP +SPTSP+YS SSP Y S+ Sbjct: 90 KYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSPYAIASPKFSPTSPAYSISSPVYDRSA- 148 Query: 458 YNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDD 318 + + + P SP + SP Q S ++P N D+ Sbjct: 149 --NARNKNQHPLSPAYILQ---SPVQVKQHIQDVSVFSPIQQANADE 190 [197][TOP] >UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi RepID=Q8MX30_NAEGR Length = 1590 Score = 92.4 bits (228), Expect = 2e-17 Identities = 42/59 (71%), Positives = 52/59 (88%), Gaps = 2/59 (3%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SPSSP YSPTSP+YSP+SP+YSPTSP+YSP+SP YSP+SP S TSP+YSP+SP +S Sbjct: 1532 YSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSPNYSPTSPAYS 1590 Score = 87.0 bits (214), Expect = 9e-16 Identities = 45/75 (60%), Positives = 55/75 (73%), Gaps = 6/75 (8%) Frame = -2 Query: 575 SPSSP-----YSPTSP-SYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 SP+SP YSP+SP +YSPTSP+YSP+SP+YSP+SP YSP+SP S TSP YSP+SP Sbjct: 1522 SPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSP- 1580 Query: 413 FSPSTGYSPSQPGYS 369 YSP+ P YS Sbjct: 1581 -----NYSPTSPAYS 1590 Score = 85.1 bits (209), Expect = 4e-15 Identities = 47/78 (60%), Positives = 56/78 (71%), Gaps = 5/78 (6%) Frame = -2 Query: 578 FSPSSPYSPTSPS----YSPTSP-SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 FSP + SPTSP YSP+SP +YSPTSP+YSPSSP YSP+SP S TSP+YSP+SP Sbjct: 1516 FSPVAS-SPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSP- 1573 Query: 413 FSPSTGYSPSQPGYSPSS 360 YSP+ P YSP+S Sbjct: 1574 -----AYSPTSPNYSPTS 1586 Score = 75.9 bits (185), Expect = 2e-12 Identities = 47/85 (55%), Positives = 56/85 (65%), Gaps = 6/85 (7%) Frame = -2 Query: 578 FSPSSPYSPTSP-SYSPTSPS----YSPTSP-SYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 FSPS S SP + SPTSP YSP+SP +YSP+SP YSPSSP S TSP YSP+SP Sbjct: 1507 FSPSPYNSAFSPVASSPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSP 1566 Query: 416 QFSPSTGYSPSQPGYSPSSTSQYTP 342 YSP+ P YSP+S + Y+P Sbjct: 1567 N------YSPTSPAYSPTSPN-YSP 1584 [198][TOP] >UniRef100_C6F0A3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum RepID=C6F0A3_PLAFA Length = 195 Score = 91.3 bits (225), Expect = 5e-17 Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 2/72 (2%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--G 396 S YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP++ Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA 96 Query: 395 YSPSQPGYSPSS 360 + + P YSP S Sbjct: 97 QNIASPNYSPYS 108 Score = 87.8 bits (216), Expect = 6e-16 Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 1/77 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGY 393 +S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP S Y Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 89 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P ++ Y+P Sbjct: 90 SPTSPVAQNIASPNYSP 106 Score = 82.4 bits (202), Expect = 2e-14 Identities = 46/93 (49%), Positives = 57/93 (61%), Gaps = 20/93 (21%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPS------------------YSPTSPSYSPSSPTYSPSSPY 456 +SP+SP Y+ + YSPTSP YS TSP YSP+SP YSP+SP Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60 Query: 455 NSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSS 360 S TSP YSP+SP++SP S YSP+ P YSP+S Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 93 Score = 80.1 bits (196), Expect = 1e-13 Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S TSP Sbjct: 60 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 119 Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330 YS SSP + S + P P Y S Q D Sbjct: 120 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 158 Score = 76.3 bits (186), Expect = 2e-12 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 12/85 (14%) Frame = -2 Query: 560 YSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 YSPTSP+Y+ + YSPTSP Y+ SP YS +SP S TSP YSP+SP+ Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S YSP+ P YSP+S +Y+P Sbjct: 61 YSPTSPKYSPTSPKYSPTS-PKYSP 84 [199][TOP] >UniRef100_B0DB45 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DB45_LACBS Length = 1742 Score = 91.3 bits (225), Expect = 5e-17 Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 7/77 (9%) Frame = -2 Query: 569 SSPY------SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS 408 +SPY +PTSP+YSPTSP+ + TSP YSP+SP YSP+SP S TSP YSP SP FS Sbjct: 1586 ASPYYDPSARNPTSPTYSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFS 1645 Query: 407 P-STGYSPSQPGYSPSS 360 P S YSP+ P +SP+S Sbjct: 1646 PTSPRYSPTSPSFSPAS 1662 Score = 86.3 bits (212), Expect = 2e-15 Identities = 41/61 (67%), Positives = 49/61 (80%), Gaps = 1/61 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP+SP + TSP YSPTSP YSPTSPS+SP+SP YSP SP S TSP YSP+SP FSP+ Sbjct: 1602 YSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPA 1661 Query: 401 T 399 + Sbjct: 1662 S 1662 Score = 80.5 bits (197), Expect = 9e-14 Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 32/107 (29%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSP----------------------SYSPTSPSYSPSSPT-- 477 +SPSSP YSPTSPS+ P SP + +PTSP+YSP+SP Sbjct: 1551 YSPSSPNVYSPTSPSFVPQSPFGGATSPFGTSPYAASPYYDPSARNPTSPTYSPTSPALN 1610 Query: 476 -----YSPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 354 YSP+SP S TSP +SP+SP++SP S +SP+ P YSP+S S Sbjct: 1611 LTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPS 1657 Score = 74.3 bits (181), Expect = 6e-12 Identities = 36/56 (64%), Positives = 44/56 (78%), Gaps = 1/56 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 +SP+SP YSPTSPS+SPTSP YSP SPS+SP+SP YSP TSP +SP+SP+ Sbjct: 1616 YSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSP-------TSPSFSPASPR 1664 Score = 69.7 bits (169), Expect = 2e-10 Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 1/53 (1%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 R+SP+SP +SPTSP YSP SPS+SPTSP YSP+SP++SP+SP S Y P Sbjct: 1622 RYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASPRCKFLSIIYEP 1674 [200][TOP] >UniRef100_A5DCV1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii RepID=A5DCV1_PICGU Length = 224 Score = 91.3 bits (225), Expect = 5e-17 Identities = 47/81 (58%), Positives = 56/81 (69%), Gaps = 7/81 (8%) Frame = -2 Query: 563 PYSPT---SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393 P+ PT SPSYSPTSPSYSPTSPSYSP+SP+YSP+SP S TSP YSP+SP +SP+ Sbjct: 124 PHHPTHLLSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPNVAQ 183 Query: 392 ----SPSQPGYSPSSTSQYTP 342 P+ Y PS + TP Sbjct: 184 LLTNFPTVLTYFPSLLTHVTP 204 Score = 73.2 bits (178), Expect = 1e-11 Identities = 33/39 (84%), Positives = 38/39 (97%), Gaps = 1/39 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS 465 +SP+SP YSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+ Sbjct: 142 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPN 180 Score = 69.7 bits (169), Expect = 2e-10 Identities = 40/73 (54%), Positives = 47/73 (64%), Gaps = 3/73 (4%) Frame = -2 Query: 551 TSPSYSPT---SPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPSQ 381 T + PT SPSYSPTSPSYSP+SP+YSP TSP YSP+SP YSP+ Sbjct: 121 THQPHHPTHLLSPSYSPTSPSYSPTSPSYSP-------TSPSYSPTSPS------YSPTS 167 Query: 380 PGYSPSSTSQYTP 342 P YSP+S S Y+P Sbjct: 168 PSYSPTSPS-YSP 179 [201][TOP] >UniRef100_UPI000151A8B4 hypothetical protein PGUG_01106 n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151A8B4 Length = 224 Score = 90.5 bits (223), Expect = 8e-17 Identities = 47/81 (58%), Positives = 55/81 (67%), Gaps = 7/81 (8%) Frame = -2 Query: 563 PYSPT---SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393 P+ PT SPSYSPTSPSYSPTSPSYSP+SP YSP+SP S TSP YSP+SP +SP+ Sbjct: 124 PHHPTHLLSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPNVAQ 183 Query: 392 ----SPSQPGYSPSSTSQYTP 342 P+ Y PS + TP Sbjct: 184 LLTNFPTVLTYFPSLLTHVTP 204 Score = 70.9 bits (172), Expect = 7e-11 Identities = 32/39 (82%), Positives = 37/39 (94%), Gaps = 1/39 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPS 465 +SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+ Sbjct: 142 YSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPN 180 [202][TOP] >UniRef100_C6F0B0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum RepID=C6F0B0_PLAFA Length = 188 Score = 84.7 bits (208), Expect = 5e-15 Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 2/72 (2%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--G 396 +S Y+ SP YS TSP YSPTSP YSP+SP YSP+SP S TSP YSP+SP++SP++ Sbjct: 30 NSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA 89 Query: 395 YSPSQPGYSPSS 360 + + P YSP S Sbjct: 90 QNIASPNYSPYS 101 Score = 80.1 bits (196), Expect = 1e-13 Identities = 47/99 (47%), Positives = 54/99 (54%), Gaps = 15/99 (15%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPT-----------YSPSSPYNSGTSP 438 ++SP+SP YSPTSP YSPTSP YSPTSP YSP+SP YS +SP S TSP Sbjct: 53 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 112 Query: 437 DYSPSSPQFSPS---TGYSPSQPGYSPSSTSQYTPKTND 330 YS SSP + S + P P Y S Q D Sbjct: 113 AYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQD 151 Score = 77.4 bits (189), Expect = 7e-13 Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 13/86 (15%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSP-----------SYSPTSPSYSPSSPTYSPSSPYNSGTSPD 435 +SP+SP Y+ + YSPTSP Y+ SP YS +SP YSP+SP S TSP Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60 Query: 434 YSPSSPQFSP-STGYSPSQPGYSPSS 360 YSP+SP++SP S YSP+ P YSP+S Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTS 86 Score = 76.3 bits (186), Expect = 2e-12 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 12/85 (14%) Frame = -2 Query: 560 YSPTSPSYSPTSPSYSPTSPS-----------YSPSSPTYSPSSPYNSGTSPDYSPSSPQ 414 YSPTSP+Y+ + YSPTSP Y+ SP YS +SP S TSP YSP+SP+ Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60 Query: 413 FSP-STGYSPSQPGYSPSSTSQYTP 342 +SP S YSP+ P YSP+S +Y+P Sbjct: 61 YSPTSPKYSPTSPKYSPTS-PKYSP 84 [203][TOP] >UniRef100_A8N128 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8N128_COPC7 Length = 1642 Score = 84.7 bits (208), Expect = 5e-15 Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 5/79 (6%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSP-YNSGTSPDYSPSSPQFS 408 R + S YSPTSP TSP+YSPTSP +SP+SP YSP SP + S SP+YSP+SP +S Sbjct: 1540 RQATSPTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSPASPSYS 1599 Query: 407 P---STGYSPSQPGYSPSS 360 P S YSPS P +SP+S Sbjct: 1600 PAPASPNYSPSSPTWSPTS 1618 Score = 79.7 bits (195), Expect = 2e-13 Identities = 47/107 (43%), Positives = 61/107 (57%), Gaps = 17/107 (15%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTSPSYSPTSP-----SYSP--------SSPTYSPSSPYNSGT 444 +SPSSP YSPTSP P SP +PTSP + SP +SPTYSP+SP T Sbjct: 1498 YSPSSPNAYSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRRQATSPTYSPTSPIAGLT 1557 Query: 443 SPDYSPSSPQFSPST--GYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309 SP YSP+SP FSP++ GYSP P + ++ Y+P + P + Sbjct: 1558 SPAYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSPASPSYSPAPAS 1604 Score = 70.5 bits (171), Expect = 9e-11 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 5/70 (7%) Frame = -2 Query: 578 FSPSSP--YSPTSPSY-SPTSPSYSPTSPSYSPS--SPTYSPSSPYNSGTSPDYSPSSPQ 414 FSP+SP YSP SP++ SP SP+YSP SPSYSP+ SP YSPSSP S TSP + + P Sbjct: 1568 FSPTSPNGYSPQSPNFGSPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSPAHDQNGPT 1627 Query: 413 FSPSTGYSPS 384 + S+ Y S Sbjct: 1628 NNRSSAYQQS 1637 Score = 69.7 bits (169), Expect = 2e-10 Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 19/98 (19%) Frame = -2 Query: 572 PSSPYSP----TSPSYSPTSPS-YSPTSPSYSPSSPTYSPSSPYNS-------------G 447 P SP+ P YSP+SP+ YSPTSP P SP +P+SP+++ Sbjct: 1483 PQSPHGAGGMSPGPGYSPSSPNAYSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRRQA 1542 Query: 446 TSPDYSPSSPQFS-PSTGYSPSQPGYSPSSTSQYTPKT 336 TSP YSP+SP S YSP+ PG+SP+S + Y+P++ Sbjct: 1543 TSPTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSPQS 1580 Score = 56.6 bits (135), Expect = 1e-06 Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 4/55 (7%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSPT--SPSYSPTSPSYSPSSPTYSPSSPYNSGTSP-DYSPS 423 SP+SP YSP SPSYSP SP+YSP+SP++SP+SP + + P N+ +S SPS Sbjct: 1585 SPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSPAHDQNGPTNNRSSAYQQSPS 1639 [204][TOP] >UniRef100_Q9FI54 Genomic DNA, chromosome 5, TAC clone:K3K7 n=1 Tax=Arabidopsis thaliana RepID=Q9FI54_ARATH Length = 314 Score = 83.6 bits (205), Expect = 1e-14 Identities = 48/104 (46%), Positives = 54/104 (51%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYS 390 S YSPTSPSYSPTSPSY P S S SP S +YSP SP +S SP YSP+S SP Sbjct: 110 SPTYSPTSPSYSPTSPSYRPNSSSDSPDSHSYSPVSPDHSLVSPQYSPTSTHHSPILSSP 169 Query: 389 PSQPGYSPSSTSQYTPKTNDNKDDPGTQ*ARLICLRDGSDCADG 258 P GY P KT+ K+ + DGS DG Sbjct: 170 PEDYGYGPDDIEAGKMKTDQLKE-----------IGDGSSHVDG 202 [205][TOP] >UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii RepID=B9PMD7_TOXGO Length = 1892 Score = 80.1 bits (196), Expect = 1e-13 Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 10/88 (11%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSG---TSPDYSPSSPQFS 408 +P+SP SP SP+YSPTSP YSPTSP YSP+ YSP SP Y +G SP ++ SP++S Sbjct: 1750 NPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYS 1809 Query: 407 PST--GYSPSQP----GYSPSSTSQYTP 342 PS+ YSP+ P SPS + P Sbjct: 1810 PSSPAAYSPTSPMPNVAGSPSYEDSHAP 1837 Score = 73.2 bits (178), Expect = 1e-11 Identities = 44/91 (48%), Positives = 53/91 (58%), Gaps = 13/91 (14%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSP--SYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSS 420 +P SP+ S SYSPTSP +PTSP+ YSP+SP YSP+SP S T YSP S Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQS 1787 Query: 419 PQFSPSTG-YSPS----QPGYSPSSTSQYTP 342 P + G SPS P YSPSS + Y+P Sbjct: 1788 PSYGAGQGPLSPSFTVQSPRYSPSSPAAYSP 1818 Score = 68.6 bits (166), Expect = 3e-10 Identities = 50/112 (44%), Positives = 59/112 (52%), Gaps = 37/112 (33%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTS-----------------------PSYSPTSP------SYS 492 +SPSSP YSPTSP+YSPTS PS +P SP SYS Sbjct: 1682 YSPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPMSPHFSASTSYS 1741 Query: 491 PSSPTY-----SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 354 P+SP SP+SPY SP YSP+SP++SP S YSP+ YSP S S Sbjct: 1742 PTSPVQQSNPTSPTSPY----SPAYSPTSPRYSPTSPMYSPTFAPYSPQSPS 1789 Score = 68.2 bits (165), Expect = 5e-10 Identities = 43/90 (47%), Positives = 52/90 (57%), Gaps = 15/90 (16%) Frame = -2 Query: 566 SPYSPT-SPSYSPTSP-SYSPTSPSYSPSSPTY-------------SPSSPYNSGTSPDY 432 SP SPT SPSYSP+SP SYSPTSP+YSP+S +P SP+ SP Sbjct: 1672 SPTSPTLSPSYSPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPF----SPSN 1727 Query: 431 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342 +P SP FS ST YSP+ P + TS +P Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSP 1757 Score = 67.4 bits (163), Expect = 8e-10 Identities = 46/103 (44%), Positives = 60/103 (58%), Gaps = 24/103 (23%) Frame = -2 Query: 578 FSPSSP-----YSPTSP-SYSPTSPSYSPTSP----------------SYSPSSPTYSPS 465 +SP+SP YSP+SP SYSPTSP+YSPTS SP SP+ +P Sbjct: 1671 YSPTSPTLSPSYSPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPM 1730 Query: 464 SPYNSGTSPDYSPSSP--QFSPSTGYSPSQPGYSPSSTSQYTP 342 SP+ S S YSP+SP Q +P++ SP P YSP+S +Y+P Sbjct: 1731 SPHFS-ASTSYSPTSPVQQSNPTSPTSPYSPAYSPTS-PRYSP 1771 Score = 60.1 bits (144), Expect = 1e-07 Identities = 41/108 (37%), Positives = 50/108 (46%), Gaps = 35/108 (32%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSP----SYSPSSPTYSPSSPYNS------------- 450 FSP +P SP SPS P +SPTSP + SSP+YSPSSP ++ Sbjct: 1595 FSPRNPLSPLSPS-GPPGGVFSPTSPILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDM 1653 Query: 449 ------------GTSPDYSPSSPQFSPS------TGYSPSQPGYSPSS 360 G YSP+SP SPS YSP+ P YSP+S Sbjct: 1654 VISPGGVGSDGRGRGGSYSPTSPTLSPSYSPSSPPSYSPTSPAYSPTS 1701 [206][TOP] >UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49 RepID=B6KEC6_TOXGO Length = 1892 Score = 80.1 bits (196), Expect = 1e-13 Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 10/88 (11%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSP-YNSG---TSPDYSPSSPQFS 408 +P+SP SP SP+YSPTSP YSPTSP YSP+ YSP SP Y +G SP ++ SP++S Sbjct: 1750 NPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYS 1809 Query: 407 PST--GYSPSQP----GYSPSSTSQYTP 342 PS+ YSP+ P SPS + P Sbjct: 1810 PSSPAAYSPTSPMPNVAGSPSYEDSHAP 1837 Score = 73.2 bits (178), Expect = 1e-11 Identities = 44/91 (48%), Positives = 53/91 (58%), Gaps = 13/91 (14%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSP--SYSPTSPS------YSPSSPTYSPSSPYNSGTSPDYSPSS 420 +P SP+ S SYSPTSP +PTSP+ YSP+SP YSP+SP S T YSP S Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQS 1787 Query: 419 PQFSPSTG-YSPS----QPGYSPSSTSQYTP 342 P + G SPS P YSPSS + Y+P Sbjct: 1788 PSYGAGQGPLSPSFTVQSPRYSPSSPAAYSP 1818 Score = 67.4 bits (163), Expect = 8e-10 Identities = 49/112 (43%), Positives = 59/112 (52%), Gaps = 37/112 (33%) Frame = -2 Query: 578 FSPSSP--YSPTSPSYSPTS-----------------------PSYSPTSP------SYS 492 +SPS+P YSPTSP+YSPTS PS +P SP SYS Sbjct: 1682 YSPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPMSPHFSASTSYS 1741 Query: 491 PSSPTY-----SPSSPYNSGTSPDYSPSSPQFSP-STGYSPSQPGYSPSSTS 354 P+SP SP+SPY SP YSP+SP++SP S YSP+ YSP S S Sbjct: 1742 PTSPVQQSNPTSPTSPY----SPAYSPTSPRYSPTSPMYSPTFAPYSPQSPS 1789 Score = 67.0 bits (162), Expect = 1e-09 Identities = 42/90 (46%), Positives = 52/90 (57%), Gaps = 15/90 (16%) Frame = -2 Query: 566 SPYSPT-SPSYSPTSP-SYSPTSPSYSPSSPTY-------------SPSSPYNSGTSPDY 432 SP SPT SPSYSP++P SYSPTSP+YSP+S +P SP+ SP Sbjct: 1672 SPTSPTLSPSYSPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPF----SPSN 1727 Query: 431 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342 +P SP FS ST YSP+ P + TS +P Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSP 1757 Score = 66.2 bits (160), Expect = 2e-09 Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 24/103 (23%) Frame = -2 Query: 578 FSPSSP-----YSPTSP-SYSPTSPSYSPTSP----------------SYSPSSPTYSPS 465 +SP+SP YSP++P SYSPTSP+YSPTS SP SP+ +P Sbjct: 1671 YSPTSPTLSPSYSPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPM 1730 Query: 464 SPYNSGTSPDYSPSSP--QFSPSTGYSPSQPGYSPSSTSQYTP 342 SP+ S S YSP+SP Q +P++ SP P YSP+S +Y+P Sbjct: 1731 SPHFS-ASTSYSPTSPVQQSNPTSPTSPYSPAYSPTS-PRYSP 1771 Score = 60.1 bits (144), Expect = 1e-07 Identities = 41/108 (37%), Positives = 50/108 (46%), Gaps = 35/108 (32%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSP----SYSPSSPTYSPSSPYNS------------- 450 FSP +P SP SPS P +SPTSP + SSP+YSPSSP ++ Sbjct: 1595 FSPRNPLSPLSPS-GPPGGVFSPTSPILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDM 1653 Query: 449 ------------GTSPDYSPSSPQFSPS------TGYSPSQPGYSPSS 360 G YSP+SP SPS YSP+ P YSP+S Sbjct: 1654 VISPGGVGSDGRGRGGSYSPTSPTLSPSYSPSAPPSYSPTSPAYSPTS 1701 [207][TOP] >UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TTU2_VANPO Length = 1311 Score = 80.1 bits (196), Expect = 1e-13 Identities = 39/68 (57%), Positives = 50/68 (73%), Gaps = 2/68 (2%) Frame = -2 Query: 575 SPSSPY--SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 SPSSP +SP +SPTSP+YSPTSPSYSP+SP+YSP+S S TS YSP+SP +S + Sbjct: 1211 SPSSPGFGGVSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSTSYSQTSSSYSPTSPSYSQN 1270 Query: 401 TGYSPSQP 378 ++P P Sbjct: 1271 LHHTPKIP 1278 Score = 56.2 bits (134), Expect = 2e-06 Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 4/83 (4%) Frame = -2 Query: 575 SPSSPY--SPTSPSYSP-TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS- 408 SP + Y SP+SP + +SP +SPTSP YSP+SP S TSP YSP+S +S Sbjct: 1203 SPFTAYGESPSSPGFGGVSSPGFSPTSP-------AYSPTSPSYSPTSPSYSPTSTSYSQ 1255 Query: 407 PSTGYSPSQPGYSPSSTSQYTPK 339 S+ YSP+ P Y S +TPK Sbjct: 1256 TSSSYSPTSPSY--SQNLHHTPK 1276 [208][TOP] >UniRef100_UPI0000F3065A UPI0000F3065A related cluster n=1 Tax=Bos taurus RepID=UPI0000F3065A Length = 540 Score = 78.2 bits (191), Expect = 4e-13 Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F P SP + P SP + P SP + SP + P SP ++P SP + SPD+ P SP++ P Sbjct: 65 FGPQSPEFEPQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSPRYEPQ 124 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S GY P PGY P S T +P Sbjct: 125 SPGYEPKSPGYEPRSPGYGTQSPEYEPQNP 154 Score = 57.8 bits (138), Expect = 6e-07 Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 15/81 (18%) Frame = -2 Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399 P SP + P SP + P SP + P SP SP + P SP+F+P S Sbjct: 60 PQSPGFGPQSPEFEPQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSP 119 Query: 398 GYSPSQPGYSPSSTSQYTPKT 336 Y P PGY P S Y P++ Sbjct: 120 RYEPQSPGYEPKSPG-YEPRS 139 Score = 57.0 bits (136), Expect = 1e-06 Identities = 26/75 (34%), Positives = 36/75 (48%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393 PS ++P SP SP + P SP Y P SP Y P SP SP Y SP++ P Sbjct: 96 PSPEFAPRSPESDSQSPDFEPQSPRYEPQSPGYEPKSPGYEPRSPGYGTQSPEYEPQNPE 155 Query: 392 SPSQPGYSPSSTSQY 348 +Q + +S++ Sbjct: 156 FKTQSPEFEAESSKF 170 Score = 56.6 bits (135), Expect = 1e-06 Identities = 24/55 (43%), Positives = 29/55 (52%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 S S + P SP Y P SP Y P SP Y P SP Y SP +P++ SP+F Sbjct: 109 SQSPDFEPQSPRYEPQSPGYEPKSPGYEPRSPGYGTQSPEYEPQNPEFKTQSPEF 163 [209][TOP] >UniRef100_UPI00004C0623 PREDICTED: similar to zinc finger protein 239 (predicted) isoform 1 n=1 Tax=Canis lupus familiaris RepID=UPI00004C0623 Length = 554 Score = 74.7 bits (182), Expect = 5e-12 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F P SP + SP + P SP + SP + P SP ++P SP + SP++ P SP++ P Sbjct: 65 FEPQSPGFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQ 124 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S GY P PGY P S Y PK+ Sbjct: 125 SPGYEPRSPGYEPKSPG-YEPKS 146 Score = 70.9 bits (172), Expect = 7e-11 Identities = 38/95 (40%), Positives = 46/95 (48%), Gaps = 9/95 (9%) Frame = -2 Query: 581 RFSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSP 426 RF P SP + P SP ++P SP SP + P SP Y P SP SP Y P Sbjct: 78 RFEPESPGFESRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEP 137 Query: 425 SSPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNK 324 SP + P S GY P PGY S + Y P+ + K Sbjct: 138 KSPGYEPKSPGYEPRSPGYE-SQSPGYEPQNPEFK 171 Score = 63.5 bits (153), Expect = 1e-08 Identities = 31/72 (43%), Positives = 33/72 (45%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 S S + P SP Y P SP Y P SP Y P SP Y P SP SP Y SP G Sbjct: 109 SQSPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSP------G 162 Query: 395 YSPSQPGYSPSS 360 Y P P + S Sbjct: 163 YEPQNPEFKTQS 174 Score = 61.6 bits (148), Expect = 4e-08 Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 R+ P SP Y P SP Y P SP Y P SP Y P SP Y SP +P++ SP+F Sbjct: 120 RYEPQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSPGYEPQNPEFKTQSPEF 177 Score = 56.2 bits (134), Expect = 2e-06 Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 + P SP Y P SP Y P SP Y P SP Y SP Y P +P SP++ S +F Sbjct: 128 YEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSPGYEPQNPEFKTQSPEFEAQSSKF 184 [210][TOP] >UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia uvarioides RepID=Q9AXN1_9FLOR Length = 1712 Score = 74.7 bits (182), Expect = 5e-12 Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 19/95 (20%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSP--------------SYSPTSPSY-SPSSPTYSPSSPYNSGTS 441 SP + YSPTSP+++PTSP +YSPT PSY + +SP Y Y+ G+ Sbjct: 1598 SPGAQYSPTSPAFTPTSPGYSSATGPGRPGTGAYSPTGPSYNAAASPGYQSGINYSPGSP 1657 Query: 440 PDYSPSSPQFSPST----GYSPSQPGYSPSSTSQY 348 YSP+SP F+P + GYSPS P Y+P ++ Y Sbjct: 1658 HTYSPNSPVFTPRSPAAHGYSPSTPQYNPQGSNPY 1692 [211][TOP] >UniRef100_A9SW33 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SW33_PHYPA Length = 284 Score = 74.3 bits (181), Expect = 6e-12 Identities = 42/77 (54%), Positives = 46/77 (59%), Gaps = 8/77 (10%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS-------SPQF 411 S PYSP+ SP SP+YSP+ SP SPTYSPS Y S SP YSPS SP + Sbjct: 158 SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTY 217 Query: 410 SPSTGY-SPSQPGYSPS 363 SPS Y SP P YSPS Sbjct: 218 SPSPVYKSPPSPSYSPS 234 Score = 68.6 bits (166), Expect = 3e-10 Identities = 42/84 (50%), Positives = 46/84 (54%), Gaps = 8/84 (9%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS-------SPQF 411 S PY+ SP Y SP YSP+ SP SPTYSPS Y S SP YSPS SP + Sbjct: 146 SPPYASPSPVYE--SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTY 203 Query: 410 SPSTGY-SPSQPGYSPSSTSQYTP 342 SPS Y SP P YSPS + P Sbjct: 204 SPSPVYKSPPSPTYSPSPVYKSPP 227 Score = 62.4 bits (150), Expect = 2e-08 Identities = 41/85 (48%), Positives = 44/85 (51%), Gaps = 8/85 (9%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS-------SPQ 414 PS P P SP Y SP Y+ SP Y SP YSPS Y S SP YSPS SP Sbjct: 133 PSCPPPPESPVYE--SPPYASPSPVYE--SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPT 188 Query: 413 FSPSTGY-SPSQPGYSPSSTSQYTP 342 +SPS Y SP P YSPS + P Sbjct: 189 YSPSPVYKSPPSPTYSPSPVYKSPP 213 Score = 60.8 bits (146), Expect = 7e-08 Identities = 34/60 (56%), Positives = 38/60 (63%), Gaps = 8/60 (13%) Frame = -2 Query: 578 FSPSSPY-SPTSPSYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGTSPDYSPS 423 +SPS Y SP SP+YSP+ SP SP+YSPS SPTYSPS Y S SP YSPS Sbjct: 175 YSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPSYSPS 234 [212][TOP] >UniRef100_Q4UCP5 DNA-directed RNA polymerase n=1 Tax=Theileria annulata RepID=Q4UCP5_THEAN Length = 1678 Score = 74.3 bits (181), Expect = 6e-12 Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 17/97 (17%) Frame = -2 Query: 575 SPSSPYSPTS-------PSYSPTSP--------SYSPTSPSYSPSSPTYSPSSPYN--SG 447 SP+SP SPTS P+YSPTSP + SPTSP YSP+ YSP+SP + S Sbjct: 1556 SPTSPMSPTSAISPVYSPAYSPTSPMSPTSPTSALSPTSPVYSPA---YSPTSPTSAMSP 1612 Query: 446 TSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKT 336 TSP YSP+ SP+ GY+P+ P YSP+ Y+P T Sbjct: 1613 TSPVYSPAYSPTSPNLGYAPTSPVYSPA----YSPTT 1645 Score = 73.6 bits (179), Expect = 1e-11 Identities = 46/89 (51%), Positives = 60/89 (67%), Gaps = 10/89 (11%) Frame = -2 Query: 578 FSPSSPYSPTSP--SYSPT----SPSYSPTSP--SYSPSSPTYSPSSPYNSGTSPD--YS 429 +SP+SP SPTSP + SPT SP+YSPTSP + SP+SP YSP+ S TSP+ Y+ Sbjct: 1575 YSPTSPMSPTSPTSALSPTSPVYSPAYSPTSPTSAMSPTSPVYSPA---YSPTSPNLGYA 1631 Query: 428 PSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342 P+SP +SP+ YSP+ P Y S TS +P Sbjct: 1632 PTSPVYSPA--YSPTTPNYGYSPTSPLSP 1658 Score = 67.0 bits (162), Expect = 1e-09 Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 11/96 (11%) Frame = -2 Query: 575 SPSSP-----YSPTSPS--YSPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPS 423 SP+SP YSPTSP+ SPTSP Y SP+YSP+SP Y+P+SP SP YSP+ Sbjct: 1591 SPTSPVYSPAYSPTSPTSAMSPTSPVY---SPAYSPTSPNLGYAPTSPV---YSPAYSPT 1644 Query: 422 SPQ--FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKD 321 +P +SP++ SP+ P YSP T ++P ++ D Sbjct: 1645 TPNYGYSPTSPLSPTSPAYSP--TDPFSPNPFEDID 1678 Score = 55.8 bits (133), Expect = 2e-06 Identities = 42/81 (51%), Positives = 49/81 (60%), Gaps = 3/81 (3%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPD--YSPSSPQFSPS 402 SP+SP SPTSP SPTSP SPTS SP YSP+SP S TSP SP+SP +SP+ Sbjct: 1544 SPTSPMSPTSPM-SPTSPM-SPTSAISPVYSPAYSPTSPM-SPTSPTSALSPTSPVYSPA 1600 Query: 401 TGYSPSQPGYSPSS-TSQYTP 342 YSP+S TS +P Sbjct: 1601 ---------YSPTSPTSAMSP 1612 [213][TOP] >UniRef100_UPI0001792AA2 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792AA2 Length = 649 Score = 72.8 bits (177), Expect = 2e-11 Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 1/80 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 + SSP Y +SPSY +SPSY +SPSY SS +Y SSP G+SP Y SSP + S Sbjct: 460 YGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSS 519 Query: 401 TGYSPSQPGYSPSSTSQYTP 342 + Y+ + P YS SS+S +P Sbjct: 520 SLYAGNSPSYSGSSSSYGSP 539 Score = 65.9 bits (159), Expect = 2e-09 Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 1/73 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GY 393 SS Y +SPSY +SPSY +SPSY SSP+Y +SP G+S Y SSP + S+ Y Sbjct: 380 SSSYGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSY 439 Query: 392 SPSQPGYSPSSTS 354 S P Y SS S Sbjct: 440 GGSSPSYGGSSHS 452 Score = 65.5 bits (158), Expect = 3e-09 Identities = 35/73 (47%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPSTGY 393 S Y +SPSY +S SY +SPSY SSP+Y SSP G+SP Y SSP + S+ Y Sbjct: 436 SHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSY 495 Query: 392 SPSQPGYSPSSTS 354 S P Y SS S Sbjct: 496 GGSSPSYGGSSPS 508 Score = 63.2 bits (152), Expect = 1e-08 Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GY 393 SS Y +S SY +S SY +SPSY SSP+Y SSP G+SP Y +SP + S+ Y Sbjct: 366 SSSYGGSSSSYGGSSSSYGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSY 425 Query: 392 SPSQPGYSPSSTS 354 S P Y SS S Sbjct: 426 GGSSPSYGGSSHS 438 Score = 62.4 bits (150), Expect = 2e-08 Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GY 393 S Y +SPSY +S SY +SPSY SS +Y SSP G+SP Y SSP + S+ Y Sbjct: 422 SHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSY 481 Query: 392 SPSQPGYSPSSTS 354 S P Y SS+S Sbjct: 482 GGSSPSYGGSSSS 494 Score = 61.2 bits (147), Expect = 6e-08 Identities = 37/79 (46%), Positives = 46/79 (58%), Gaps = 2/79 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 + SSP Y +S SY +SPSY +SPSY SSP+Y SS Y +G SP YS SS + Sbjct: 481 YGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSSSLY-AGNSPSYSGSSSSYGSP 539 Query: 401 TGYSPSQPGYSP-SSTSQY 348 + Y PS SP S+S Y Sbjct: 540 SPYKPSYGSPSPYKSSSSY 558 Score = 60.8 bits (146), Expect = 7e-08 Identities = 37/82 (45%), Positives = 44/82 (53%), Gaps = 8/82 (9%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF---SP 405 S S Y +SPSY +SPSY +SPSY +SP+Y SS G+SP Y SS + SP Sbjct: 385 SSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSP 444 Query: 404 STG-----YSPSQPGYSPSSTS 354 S G Y S P Y SS S Sbjct: 445 SYGGSSHSYGGSSPSYGGSSPS 466 Score = 58.9 bits (141), Expect = 3e-07 Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 7/81 (8%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST--- 399 S Y +S SY +SPSY +S SY SSP+Y SS G+SP Y SSP + S+ Sbjct: 415 SPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSY 474 Query: 398 -GYSPSQPGYSPS---STSQY 348 G SPS G SPS S+S Y Sbjct: 475 GGSSPSYGGSSPSYGGSSSSY 495 Score = 58.2 bits (139), Expect = 5e-07 Identities = 38/77 (49%), Positives = 44/77 (57%), Gaps = 5/77 (6%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--- 411 + SSP Y SPSY +S SY +SPSY SS +Y SSP G+S Y SSP + Sbjct: 404 YGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGS 463 Query: 410 SPS-TGYSPSQPGYSPS 363 SPS G SPS G SPS Sbjct: 464 SPSYGGSSPSYGGSSPS 480 Score = 56.6 bits (135), Expect = 1e-06 Identities = 34/71 (47%), Positives = 40/71 (56%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP YS +SPS+ S SY +S SY SS +Y SSP G+SP Y SSP + G Sbjct: 351 SPPQKYS-SSPSFGGGSSSYGGSSSSYGGSSSSYGSSSPSYGGSSPSYGGSSPSYG---G 406 Query: 395 YSPSQPGYSPS 363 SPS G SPS Sbjct: 407 SSPSYGGNSPS 417 Score = 55.8 bits (133), Expect = 2e-06 Identities = 38/94 (40%), Positives = 47/94 (50%), Gaps = 6/94 (6%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSY---SPTSPSYSPSSPTYSPSS---PYNSGTSPDYSPSSP 417 + SS Y+ SPSYS +S SY SP PSY SP S SS PY+S SPSS Sbjct: 516 YGSSSLYAGNSPSYSGSSSSYGSPSPYKPSYGSPSPYKSSSSYKAPYSSSGPSFESPSSY 575 Query: 416 QFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 + SP +G S + SP S Y ++ K P Sbjct: 576 KLSPYSGGSSYEGSSSPYKYSSYEGSSSSYKSSP 609 [214][TOP] >UniRef100_UPI0000E241DC PREDICTED: hypothetical protein n=1 Tax=Pan troglodytes RepID=UPI0000E241DC Length = 1156 Score = 72.0 bits (175), Expect = 3e-11 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P Sbjct: 674 FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 733 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S GY P PGY P S Y P++ Sbjct: 734 SPGYEPRSPGYEPRSPG-YEPRS 755 Score = 65.1 bits (157), Expect = 4e-09 Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 RF P SP + SP P SP ++P SP SP + SP SP Y P SP + P Sbjct: 687 RFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEP 746 Query: 404 -STGYSPSQPGYSPSSTSQYTPKTNDNK 324 S GY P PGY S +S+Y + + K Sbjct: 747 RSPGYEPRSPGYE-SESSRYESQNTELK 773 Score = 55.8 bits (133), Expect = 2e-06 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%) Frame = -2 Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399 P SP + P SP + P SP + P SP SP P SP+F+P S Sbjct: 669 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 728 Query: 398 GYSPSQPGYSPSSTSQYTPKT 336 Y P PGY P S Y P++ Sbjct: 729 RYEPQSPGYEPRSPG-YEPRS 748 [215][TOP] >UniRef100_Q01K81 H0525C06.3 protein n=2 Tax=Oryza sativa RepID=Q01K81_ORYSA Length = 350 Score = 72.0 bits (175), Expect = 3e-11 Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 15/95 (15%) Frame = -2 Query: 575 SPSSPYSPT----SPSYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGTSPDYS 429 +PS P+SP+ SP YSP++P SP YSPS SP Y+PS+P+ SPDY+ Sbjct: 162 APSPPWSPSRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYA 221 Query: 428 PSSPQFSP----STGYSPSQPGYSPSSTSQYTPKT 336 PS+P P S YSPS P +S + YTP T Sbjct: 222 PSTPWSPPRRASSPDYSPSTPPRRAASPN-YTPST 255 Score = 64.7 bits (156), Expect = 5e-09 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 12/83 (14%) Frame = -2 Query: 578 FSPSSPYSP----TSPSYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYNSGTSPDY 432 ++PS+P+SP +SP YSP++P SP+Y+PS SP YSPSSP SP+Y Sbjct: 220 YAPSTPWSPPRRASSPDYSPSTPPRRAASPNYTPSTPPRRAASPDYSPSSPPRRAASPEY 279 Query: 431 SP-SSPQFSPSTGYSPSQPGYSP 366 + S P+ + S Y+PS P SP Sbjct: 280 TQLSPPRRAASPDYNPSTPPPSP 302 Score = 63.5 bits (153), Expect = 1e-08 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 19/92 (20%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN---SGTSPDY 432 +SPS+P YSP++P SP Y+P++P +SP Y+PS+P++ +SPDY Sbjct: 178 YSPSTPPRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYAPSTPWSPPRRASSPDY 237 Query: 431 SPSS-PQFSPSTGYSPS-------QPGYSPSS 360 SPS+ P+ + S Y+PS P YSPSS Sbjct: 238 SPSTPPRRAASPNYTPSTPPRRAASPDYSPSS 269 Score = 61.2 bits (147), Expect = 6e-08 Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 14/95 (14%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDY 432 ++PS+P Y+P++P P +SP YSP++P +SP Y+PS+P SPDY Sbjct: 206 YTPSTPWRRAASPDYAPSTPWSPPRRASSPDYSPSTPPRRAASPNYTPSTPPRRAASPDY 265 Query: 431 SPSSPQFSPSTGYSPSQPGYSP---SSTSQYTPKT 336 SPSSP P SP SP +++ Y P T Sbjct: 266 SPSSP---PRRAASPEYTQLSPPRRAASPDYNPST 297 Score = 60.8 bits (146), Expect = 7e-08 Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 16/106 (15%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSP---SSPTYSPSSPYNSGTSPDY 432 +SPS+P Y+P++P SP Y+P++P P SSP YSPS+P SP+Y Sbjct: 192 YSPSTPPRRAASPDYTPSTPWRRAASPDYAPSTPWSPPRRASSPDYSPSTPPRRAASPNY 251 Query: 431 SPSS-PQFSPSTGYSPSQP---GYSPSSTSQYTPKTNDNKD-DPGT 309 +PS+ P+ + S YSPS P SP T P+ + D +P T Sbjct: 252 TPSTPPRRAASPDYSPSSPPRRAASPEYTQLSPPRRAASPDYNPST 297 Score = 58.2 bits (139), Expect = 5e-07 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 17/90 (18%) Frame = -2 Query: 554 PTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS----------SPQFSP 405 P P + SP Y+P++P +SP Y+PS+P+ SPD++PS SP +SP Sbjct: 121 PPPPPRTAASPEYTPSTPWRRAASPDYTPSTPWRRAASPDHAPSPPWSPSRRAASPDYSP 180 Query: 404 ST-GYSPSQPGYSPS------STSQYTPKT 336 ST + P YSPS ++ YTP T Sbjct: 181 STPPRRAASPDYSPSTPPRRAASPDYTPST 210 [216][TOP] >UniRef100_Q4N0F9 DNA-directed RNA polymerase n=1 Tax=Theileria parva RepID=Q4N0F9_THEPA Length = 1681 Score = 72.0 bits (175), Expect = 3e-11 Identities = 44/88 (50%), Positives = 54/88 (61%), Gaps = 17/88 (19%) Frame = -2 Query: 575 SPSSPYSPTS-------PSYSPTSP--------SYSPTSPSYSPSSPTYSPSSPYN--SG 447 SP SP SPTS P+YSPTSP + SPTSP YSP+ YSP+SP + S Sbjct: 1559 SPMSPMSPTSAMSPVYSPAYSPTSPMSPTSPANALSPTSPVYSPA---YSPTSPTSAMSP 1615 Query: 446 TSPDYSPSSPQFSPSTGYSPSQPGYSPS 363 TSP YSP+ SP+ GY+P+ P YSP+ Sbjct: 1616 TSPVYSPAYSPTSPNLGYAPTSPVYSPA 1643 Score = 71.2 bits (173), Expect = 5e-11 Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 20/99 (20%) Frame = -2 Query: 578 FSPSSPYSPTSPS--YSPTSP----SYSPTSPS--YSPSSPTYSPS----------SPYN 453 +SP+SP SPTSP+ SPTSP +YSPTSP+ SP+SP YSP+ +P + Sbjct: 1578 YSPTSPMSPTSPANALSPTSPVYSPAYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTS 1637 Query: 452 SGTSPDYSPSSPQF--SPSTGYSPSQPGYSPSSTSQYTP 342 SP YSP+SP + SP++ SP+ P YSP T ++P Sbjct: 1638 PVYSPAYSPTSPNYGYSPTSPLSPTSPAYSP--TDPFSP 1674 Score = 67.4 bits (163), Expect = 8e-10 Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 13/85 (15%) Frame = -2 Query: 578 FSPSSPYSPTSPS--YSPTSP--SYSPT-------SPSYSPSSPTYSPSSPYN--SGTSP 438 FSP+SP SP SP+ SPTSP SPT SP+YSP+SP SP+SP N S TSP Sbjct: 1540 FSPTSPTSPMSPTSPMSPTSPMSPMSPTSAMSPVYSPAYSPTSP-MSPTSPANALSPTSP 1598 Query: 437 DYSPSSPQFSPSTGYSPSQPGYSPS 363 YSP+ SP++ SP+ P YSP+ Sbjct: 1599 VYSPAYSPTSPTSAMSPTSPVYSPA 1623 Score = 60.5 bits (145), Expect = 9e-08 Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 9/67 (13%) Frame = -2 Query: 575 SPSSP-----YSPTSPS--YSPTSPSYSPTSPSYSPSSPT--YSPSSPYNSGTSPDYSPS 423 SP+SP YSPTSP+ Y+PTSP Y SP+YSP+SP YSP+SP S TSP YSP+ Sbjct: 1614 SPTSPVYSPAYSPTSPNLGYAPTSPVY---SPAYSPTSPNYGYSPTSPL-SPTSPAYSPT 1669 Query: 422 SPQFSPS 402 P FSP+ Sbjct: 1670 DP-FSPN 1675 Score = 55.5 bits (132), Expect = 3e-06 Identities = 43/82 (52%), Positives = 49/82 (59%), Gaps = 7/82 (8%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF--SPSTGY 393 SP SPTSP SPTSP SPTSP SP SPT + S Y SP YSP+SP SP+ Sbjct: 1541 SPTSPTSPM-SPTSPM-SPTSPM-SPMSPTSAMSPVY----SPAYSPTSPMSPTSPANAL 1593 Query: 392 SPSQP----GYSPSS-TSQYTP 342 SP+ P YSP+S TS +P Sbjct: 1594 SPTSPVYSPAYSPTSPTSAMSP 1615 [217][TOP] >UniRef100_B7Z2Y7 cDNA FLJ59521, moderately similar to Zinc finger and SCAN domain-containing protein 2 n=1 Tax=Homo sapiens RepID=B7Z2Y7_HUMAN Length = 453 Score = 70.9 bits (172), Expect = 7e-11 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P Sbjct: 34 FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 93 Query: 404 STGYSPSQPGYSPSS 360 S GY P PGY P S Sbjct: 94 SPGYEPRSPGYEPRS 108 Score = 55.8 bits (133), Expect = 2e-06 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%) Frame = -2 Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399 P SP + P SP + P SP + P SP SP P SP+F+P S Sbjct: 29 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 88 Query: 398 GYSPSQPGYSPSSTSQYTPKT 336 Y P PGY P S Y P++ Sbjct: 89 RYEPQSPGYEPRSPG-YEPRS 108 [218][TOP] >UniRef100_B2RD90 cDNA, FLJ96507 n=1 Tax=Homo sapiens RepID=B2RD90_HUMAN Length = 520 Score = 70.9 bits (172), Expect = 7e-11 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P Sbjct: 45 FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 104 Query: 404 STGYSPSQPGYSPSS 360 S GY P PGY P S Sbjct: 105 SPGYEPRSPGYEPRS 119 Score = 55.8 bits (133), Expect = 2e-06 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%) Frame = -2 Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399 P SP + P SP + P SP + P SP SP P SP+F+P S Sbjct: 40 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 99 Query: 398 GYSPSQPGYSPSSTSQYTPKT 336 Y P PGY P S Y P++ Sbjct: 100 RYEPQSPGYEPRSPG-YEPRS 119 [219][TOP] >UniRef100_Q9H5H4 Zinc finger protein 768 n=1 Tax=Homo sapiens RepID=ZN768_HUMAN Length = 540 Score = 70.9 bits (172), Expect = 7e-11 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P Sbjct: 65 FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 124 Query: 404 STGYSPSQPGYSPSS 360 S GY P PGY P S Sbjct: 125 SPGYEPRSPGYEPRS 139 Score = 55.8 bits (133), Expect = 2e-06 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%) Frame = -2 Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399 P SP + P SP + P SP + P SP SP P SP+F+P S Sbjct: 60 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 119 Query: 398 GYSPSQPGYSPSSTSQYTPKT 336 Y P PGY P S Y P++ Sbjct: 120 RYEPQSPGYEPRSPG-YEPRS 139 [220][TOP] >UniRef100_UPI00005878B7 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI00005878B7 Length = 374 Score = 70.1 bits (170), Expect = 1e-10 Identities = 30/76 (39%), Positives = 53/76 (69%), Gaps = 1/76 (1%) Frame = -2 Query: 560 YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYSPS 384 Y+ T+PSY+ ++PSY+ ++PSY+ S P+Y+ S PY + T+ Y+ S+P ++ ST Y+ + Sbjct: 148 YTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTSTTSSYTASTPSYTESTASYTTT 207 Query: 383 QPGYSPSSTSQYTPKT 336 QP +P +T +P+T Sbjct: 208 QPSAAPPTTMTSSPRT 223 Score = 65.5 bits (158), Expect = 3e-09 Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GY 393 +S Y+ ++PSY+ + PSY+ + PSY+ S+P+Y S+PY T+P Y+ ++P ++ ST Y Sbjct: 103 TSSYTASTPSYTESRPSYATSRPSYTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSY 162 Query: 392 SPSQPGYSPSSTSQYTPK 339 + S P Y+ S S T + Sbjct: 163 ATSTPSYATSRPSYATSR 180 Score = 65.1 bits (157), Expect = 4e-09 Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 2/78 (2%) Frame = -2 Query: 563 PYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST-GYS 390 PY TS P Y+ ++PSY ++P Y+ S+P+Y S+PY + + P Y+ S+P ++ ST Y+ Sbjct: 20 PYYTTSRPPYTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYT 79 Query: 389 PSQPGYSPSSTSQYTPKT 336 S+P Y P+ST YT T Sbjct: 80 ESRPSY-PTSTPYYTTST 96 Score = 63.9 bits (154), Expect = 9e-09 Identities = 29/74 (39%), Positives = 50/74 (67%), Gaps = 1/74 (1%) Frame = -2 Query: 563 PYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYSP 387 PY+ ++PSY+ ++PSY+ + PSY S+P Y+ S+PY + T+ Y+ S+P ++ S Y+ Sbjct: 63 PYTTSTPSYTASTPSYTESRPSYPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYAT 122 Query: 386 SQPGYSPSSTSQYT 345 S+P Y+ S+ S T Sbjct: 123 SRPSYTTSTPSYPT 136 Score = 63.2 bits (152), Expect = 1e-08 Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 2/80 (2%) Frame = -2 Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 ++ S+P PTS P Y T+P Y+ T+PSY+ S+P+Y+ S+P + + P Y+ S P F+ + Sbjct: 127 YTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTST 186 Query: 401 T-GYSPSQPGYSPSSTSQYT 345 T Y+ S P Y+ ST+ YT Sbjct: 187 TSSYTASTPSYT-ESTASYT 205 Score = 61.6 bits (148), Expect = 4e-08 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Frame = -2 Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 ++ S+P PTS P Y+ ++PSY ++P Y+ S P Y+ S+P + ++P Y+ S P + S Sbjct: 29 YTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPTS 88 Query: 401 TGYSPSQPGYSPSSTSQYTPKT 336 T Y + Y +TS YT T Sbjct: 89 TPYYTTSTPYYTLTTSSYTAST 110 Score = 60.1 bits (144), Expect = 1e-07 Identities = 27/77 (35%), Positives = 47/77 (61%) Frame = -2 Query: 563 PYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGYSPS 384 PY+ ++PSY ++P Y+ ++PSY S+P Y+ S P + ++P Y+ S+P ++ S P+ Sbjct: 28 PYTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPT 87 Query: 383 QPGYSPSSTSQYTPKTN 333 Y +ST YT T+ Sbjct: 88 STPYYTTSTPYYTLTTS 104 Score = 58.9 bits (141), Expect = 3e-07 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Frame = -2 Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 ++ S P PTS P Y+ ++P Y+ T+ SY+ S+P+Y+ S P + + P Y+ S+P + S Sbjct: 78 YTESRPSYPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYATSRPSYTTSTPSYPTS 137 Query: 401 TGYSPSQPGYSPSSTSQYTPKT 336 T Y + Y S+T YT T Sbjct: 138 TPYYRTTTPYYTSTTPSYTAST 159 Score = 57.0 bits (136), Expect = 1e-06 Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 ++ S P Y+ ++PSY ++P Y T+P Y+ ++P+Y+ S+P + ++P Y+ S P ++ S Sbjct: 120 YATSRPSYTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYATS 179 Query: 401 TGYSPSQPGYSPSSTSQYTPKT 336 Y S +ST YT T Sbjct: 180 RPYFTSTTSSYTASTPSYTEST 201 Score = 56.6 bits (135), Expect = 1e-06 Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 9/97 (9%) Frame = -2 Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 + S+PY TS PSY ++P Y+ + P Y+ S+P+Y+ S+P + + P Y S+P ++ S Sbjct: 36 YPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPTSTPYYTTS 95 Query: 401 T--------GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 T Y+ S P Y+ S S T + + P Sbjct: 96 TPYYTLTTSSYTASTPSYTESRPSYATSRPSYTTSTP 132 Score = 56.6 bits (135), Expect = 1e-06 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 29/110 (26%) Frame = -2 Query: 578 FSPSSPYSPTS-PSYSPTSPSYSPTSPSYSPSSPTYSPS--------------------- 465 + S+PY TS P Y+ T+ SY+ ++PSY+ S P+Y+ S Sbjct: 85 YPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYATSRPSYTTSTPSYPTSTPYYRTT 144 Query: 464 SPYNSGTSPDYSPSSPQFSPST-GYSPSQPGYS------PSSTSQYTPKT 336 +PY + T+P Y+ S+P ++ ST Y+ S+P Y+ S+TS YT T Sbjct: 145 TPYYTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTSTTSSYTAST 194 Score = 54.3 bits (129), Expect = 7e-06 Identities = 28/83 (33%), Positives = 51/83 (61%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 ++ S+P Y+ ++PSY+ + PSY ++P Y+ S+P Y+ ++ + ++P Y+ S P ++ S Sbjct: 64 YTTSTPSYTASTPSYTESRPSYPTSTPYYTTSTPYYTLTTSSYTASTPSYTESRPSYATS 123 Query: 401 -TGYSPSQPGYSPSSTSQYTPKT 336 Y+ S P Y P+ST Y T Sbjct: 124 RPSYTTSTPSY-PTSTPYYRTTT 145 [221][TOP] >UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea RepID=A4RMP1_MAGGR Length = 1757 Score = 70.1 bits (170), Expect = 1e-10 Identities = 50/108 (46%), Positives = 64/108 (59%), Gaps = 17/108 (15%) Frame = -2 Query: 578 FSPSSP------YSPTSPSY---SPTSPSYSPTSPSYSP---SSPTYSPSSP-YNSGTSP 438 + P SP YSPTSP+ SPTSP YSP SPS+SP +SP Y SP + S TSP Sbjct: 1640 YQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSP 1699 Query: 437 D--YSPSSPQFSPSTGY-SPSQPG-YSPSSTSQYTPKTNDNKDDPGTQ 306 + YSP+SP F S SP+ PG YSP+S S ++P++ + G Q Sbjct: 1700 NAHYSPTSPSFQRSPAQASPTSPGPYSPTSPS-FSPRSPGRNNRSGGQ 1746 Score = 69.3 bits (168), Expect = 2e-10 Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 33/107 (30%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSP--SYSPT------------SPSYSPSSPTYSPSSP---YNSG 447 SP+SP+S SYSPTSP YSPT SPS+SPSSP++ P+SP + +G Sbjct: 1569 SPTSPFSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSFSPSSPSFQPTSPIMRHGAG 1628 Query: 446 TSPDYSPSSPQFSPST----------------GYSPSQPGYSPSSTS 354 S YSP+SP + P + G SP+ P YSP+S S Sbjct: 1629 DSMGYSPTSPTYQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPS 1675 Score = 63.5 bits (153), Expect = 1e-08 Identities = 50/110 (45%), Positives = 56/110 (50%), Gaps = 26/110 (23%) Frame = -2 Query: 566 SPY-SPTSPSYSPTSP-SYSPTSP------SYSPSSPT--YSPSSPYNSG-----TSPDY 432 +PY S TSP PTSP S SPTSP SYSP+SP YSP+SP G +SP + Sbjct: 1552 NPYGSGTSPR--PTSPFSTSPTSPFSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSF 1609 Query: 431 SPSSPQFSP-----------STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SPSSP F P S GYSP+ P Y P S P DN P Sbjct: 1610 SPSSPSFQPTSPIMRHGAGDSMGYSPTSPTYQPGS-----PTGGDNHYSP 1654 Score = 62.8 bits (151), Expect = 2e-08 Identities = 43/94 (45%), Positives = 53/94 (56%), Gaps = 26/94 (27%) Frame = -2 Query: 575 SPSSP-YSPTSPSYSP---TSPSY--------SPTSPS--YSPSSPTYSPSSPYNSGTSP 438 SP+SP YSP SPS+SP TSP Y SPTSP+ YSP+SP++ S S TSP Sbjct: 1663 SPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSPNAHYSPTSPSFQRSPAQASPTSP 1722 Query: 437 D-YSPSSPQFSPST-----------GYSPSQPGY 372 YSP+SP FSP + YSP+ P + Sbjct: 1723 GPYSPTSPSFSPRSPGRNNRSGGQDSYSPTSPSH 1756 [222][TOP] >UniRef100_B9G524 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9G524_ORYSJ Length = 536 Score = 68.6 bits (166), Expect = 3e-10 Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Frame = -2 Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-T 399 PS P P+ PSY P+ PSY P+ P Y+P P Y+P P + P+YSP P + PS Sbjct: 330 PSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPP 389 Query: 398 GYSPSQPGYSPSSTSQYTPK 339 Y+P P Y P S +Y P+ Sbjct: 390 QYAPQPPSYVP-SPPEYAPE 408 Score = 67.4 bits (163), Expect = 8e-10 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 2/82 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 + PS P Y+P P Y+P P P+ P YSP P+Y PS P + P Y PS P+++P Sbjct: 349 YEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPE 408 Query: 401 TG-YSPSQPGYSPSSTSQYTPK 339 Y+P PG +P S +Y P+ Sbjct: 409 PPVYAPYPPGITP-SPPEYAPE 429 Score = 66.2 bits (160), Expect = 2e-09 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYS 390 +PY P+ P P+ PSY P+ PSY PS P Y+P P + P PS P++SP Y Sbjct: 327 TPY-PSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYV 385 Query: 389 PSQPGYSPSSTSQYTPKTNDNKDDP 315 PS P Y+P S Y P + +P Sbjct: 386 PSPPQYAPQPPS-YVPSPPEYAPEP 409 Score = 62.4 bits (150), Expect = 2e-08 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Frame = -2 Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 PS P YSP PSY P+ P Y+P PSY PS P Y+P P + P +PS P+++P Sbjct: 372 PSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEP- 430 Query: 395 YSPSQPG 375 P PG Sbjct: 431 -PPGPPG 436 Score = 57.8 bits (138), Expect = 6e-07 Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Frame = -2 Query: 572 PSSP-YSPTSPSYSP--TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 PS P +P+ P +P + P P+ PSY PS P+Y PS P + P Y+P P PS Sbjct: 314 PSPPEVTPSPPEITPYPSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPS 373 Query: 401 -TGYSPSQPGYSPSSTSQYTPK 339 YSP P Y P S QY P+ Sbjct: 374 PPEYSPEPPSYVP-SPPQYAPQ 394 Score = 57.8 bits (138), Expect = 6e-07 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 +SP P Y P+ P Y+P PSY P+ P Y+P P Y+P P + + P+Y+P P P Sbjct: 377 YSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEPPPGPPG 436 Query: 401 TGYSPSQPGYSPSS 360 + G P++ Sbjct: 437 RWWRVPAAGGVPAA 450 [223][TOP] >UniRef100_B4MT78 GK20106 n=1 Tax=Drosophila willistoni RepID=B4MT78_DROWI Length = 175 Score = 68.6 bits (166), Expect = 3e-10 Identities = 36/80 (45%), Positives = 56/80 (70%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 +P+SP +PT+P SPT+P+ PTSP+ P+SPT +P++P S TSP +P++P SP+T Sbjct: 25 TPTSPTTPTTPPTSPTTPTTPPTSPTTPPTSPT-TPTTPPTSPTSPT-TPTTPPTSPTT- 81 Query: 395 YSPSQPGYSPSSTSQYTPKT 336 P+ P SP++ ++ TP T Sbjct: 82 --PTTPPTSPTTPAETTPTT 99 Score = 59.3 bits (142), Expect = 2e-07 Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTY--SPSSPYNSGTSPDYSPSSPQFSPST 399 P+SP +PT+P SPT+P SPT+P+ P+SPT +P++P S T+P P+ Sbjct: 36 PTSPTTPTTPPTSPTTPPTSPTTPTTPPTSPTSPTTPTTPPTSPTTPTTPPT-------- 87 Query: 398 GYSPSQPGYSPSSTSQYTPKTN 333 SP+ P + +T+Q TPK + Sbjct: 88 --SPTTPAETTPTTTQATPKAS 107 [224][TOP] >UniRef100_P13983 Extensin n=1 Tax=Nicotiana tabacum RepID=EXTN_TOBAC Length = 620 Score = 68.2 bits (165), Expect = 5e-10 Identities = 41/87 (47%), Positives = 47/87 (54%), Gaps = 10/87 (11%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPS--YSPTSPSYSPS-----SPTYSPSSPYNSGTSPDYSPSSPQ 414 PS YSP P+YSP PS YSP P+YSPS +PT+SP P S P YSP P Sbjct: 278 PSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTPTPTFSPPPPAYS-PPPTYSPPPPT 336 Query: 413 FSP---STGYSPSQPGYSPSSTSQYTP 342 + P S YSP P YSP Y+P Sbjct: 337 YLPLPSSPIYSPPPPVYSPPPPPSYSP 363 Score = 65.5 bits (158), Expect = 3e-09 Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 4/81 (4%) Frame = -2 Query: 572 PSSPYSPT-SPSYSPTSPSYSPTSPS--YSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 P+ SP SP+YSP P+YSP PS YSP P YSPS P +P +SP P +SP Sbjct: 270 PAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPP--PTPTPTFSPPPPAYSPP 327 Query: 401 TGYSPSQPGYSPSSTSQ-YTP 342 YSP P Y P +S Y+P Sbjct: 328 PTYSPPPPTYLPLPSSPIYSP 348 Score = 63.2 bits (152), Expect = 1e-08 Identities = 38/91 (41%), Positives = 45/91 (49%), Gaps = 16/91 (17%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYS---PSSPTYSPSSP-YNSGTSPDYSPSSPQFS--- 408 SP P P+YSP P+YSP P+Y+ P PTYSP P Y+ P YSP P +S Sbjct: 400 SPPLPAPPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPP 459 Query: 407 --------PSTGYSPSQPGYSPSSTSQ-YTP 342 P YSP P YSP S Y+P Sbjct: 460 PAYAQPPPPPPTYSPPPPAYSPPPPSPIYSP 490 Score = 61.2 bits (147), Expect = 6e-08 Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 2/90 (2%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFS--P 405 +SPS P +PT P++SP P+YSP P+YSP PTY P +SP YSP P +S P Sbjct: 305 YSPSPPPTPT-PTFSPPPPAYSP-PPTYSPPPPTYLPLP-----SSPIYSPPPPVYSPPP 357 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 YSP P Y P P + + P Sbjct: 358 PPSYSPPPPTYLPPPPPSSPPPPSFSPPPP 387 Score = 60.1 bits (144), Expect = 1e-07 Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 11/84 (13%) Frame = -2 Query: 554 PTSPSYSPTSPSYSPTSPSYSPS---SPTYSPSSPYNS--GTSPDYSPSSPQFSPS---- 402 P SP P P+YSP P+Y+ S SPTYSP P S SP YSP P +SPS Sbjct: 253 PPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPT 312 Query: 401 --TGYSPSQPGYSPSSTSQYTPKT 336 +SP P YSP T P T Sbjct: 313 PTPTFSPPPPAYSPPPTYSPPPPT 336 Score = 58.9 bits (141), Expect = 3e-07 Identities = 41/105 (39%), Positives = 46/105 (43%), Gaps = 26/105 (24%) Frame = -2 Query: 578 FSPSSP-YSPTSP-SYSPTSPSY-------SPTSPSYSPSSPTYSPSSPYNSGTS----- 441 +SP P YSP P SYSP P+Y SP PS+SP PTY S P S Sbjct: 346 YSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPA 405 Query: 440 -PDYSPSSPQFSP-----------STGYSPSQPGYSPSSTSQYTP 342 P YSP P +SP YSP P YSP Y+P Sbjct: 406 PPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSP 450 Score = 58.5 bits (140), Expect = 4e-07 Identities = 36/91 (39%), Positives = 46/91 (50%), Gaps = 13/91 (14%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSP--SSPTYSPSSP-YNSGTSPDYSPSSPQF-- 411 +P+ +SP P+YSP P+YSP P+Y P SSP YSP P Y+ P YSP P + Sbjct: 312 TPTPTFSPPPPAYSPP-PTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLP 370 Query: 410 ------SPSTGYSPSQPGY--SPSSTSQYTP 342 P +SP P Y SP Y+P Sbjct: 371 PPPPSSPPPPSFSPPPPTYEQSPPPPPAYSP 401 Score = 58.5 bits (140), Expect = 4e-07 Identities = 36/88 (40%), Positives = 42/88 (47%), Gaps = 9/88 (10%) Frame = -2 Query: 578 FSPSSPY----SPTSPSYSP---TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 FSP P P P+YSP P+YSP P+YSP PTY+ P P YSP Sbjct: 382 FSPPPPTYEQSPPPPPAYSPPLPAPPTYSPPPPTYSPPPPTYAQPPP----LPPTYSPPP 437 Query: 419 PQFS--PSTGYSPSQPGYSPSSTSQYTP 342 P +S P YSP P YSP + P Sbjct: 438 PAYSPPPPPTYSPPPPTYSPPPPAYAQP 465 Score = 56.2 bits (134), Expect = 2e-06 Identities = 35/82 (42%), Positives = 41/82 (50%), Gaps = 11/82 (13%) Frame = -2 Query: 578 FSPSSPY----SPTSPSYSPTSPSYSPTSP-SYSPSSPTYSPSSPYNS---GTSPDYSPS 423 +SP P P P+YSP P+YSP P +YSP PTYSP P + P YSP Sbjct: 416 YSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPP 475 Query: 422 SPQFS---PSTGYSPSQPGYSP 366 P +S PS YSP P P Sbjct: 476 PPAYSPPPPSPIYSPPPPQVQP 497 Score = 55.8 bits (133), Expect = 2e-06 Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 6/83 (7%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---SPDYSPSSPQFSP- 405 P+ ++P P++ P+ + P SP P PTYSP P + + SP YSP P +SP Sbjct: 235 PTHRHAP--PTHQPSPLRHLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPP 292 Query: 404 --STGYSPSQPGYSPSSTSQYTP 342 S YSP P YSPS TP Sbjct: 293 PPSPIYSPPPPAYSPSPPPTPTP 315 Score = 54.7 bits (130), Expect = 5e-06 Identities = 35/75 (46%), Positives = 41/75 (54%), Gaps = 8/75 (10%) Frame = -2 Query: 578 FSPSSP-YSPTSP-SYSPTSPSYSPTSPSYS---PSSPTYSPSSPYNS--GTSPDYSPSS 420 +SP P YSP P +YSP P+YSP P+Y+ P PTYSP P S SP YSP Sbjct: 433 YSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPIYSPPP 492 Query: 419 PQFSP-STGYSPSQP 378 PQ P +SP P Sbjct: 493 PQVQPLPPTFSPPPP 507 Score = 54.7 bits (130), Expect = 5e-06 Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 20/96 (20%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYS---PTSPSYSPTSPSYSPS--SPTYSPSSPYNSGTSPDYSPSSP 417 +SP P YSP P+Y+ P P+YSP P+YSP SP YSP P P +SP P Sbjct: 448 YSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPIYSPPPPQVQPLPPTFSPPPP 507 Query: 416 QF--------------SPSTGYSPSQPGYSPSSTSQ 351 + +P+ G PS P +SP Q Sbjct: 508 RRIHLPPPPHRQPRPPTPTYGQPPSPPTFSPPPPRQ 543 [225][TOP] >UniRef100_UPI0001796FA8 PREDICTED: zinc finger protein 768 n=1 Tax=Equus caballus RepID=UPI0001796FA8 Length = 547 Score = 67.8 bits (164), Expect = 6e-10 Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F P +P + SP + P SP + SP + P SP ++P S + SP++ P SP++ P Sbjct: 65 FEPQNPEFESQSPRFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSPRYEPQ 124 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S GY P PGY S +S+Y K+ Sbjct: 125 SPGYEPKSPGYE-SQSSRYESKS 146 Score = 55.1 bits (131), Expect = 4e-06 Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 1/77 (1%) Frame = -2 Query: 578 FSPSSPYSPT-SPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 F+P S S + SP + P SP Y P SP Y P SP Y S SP Y P +P F P Sbjct: 100 FAPRSSESDSQSPEFEPQSPRYEPQSPGYEPKSPGYESQSSRYESKSPGYEPQNPVFEPQ 159 Query: 401 TGYSPSQPGYSPSSTSQ 351 +P SP +Q Sbjct: 160 ---NPEFKTQSPEFEAQ 173 Score = 54.3 bits (129), Expect = 7e-06 Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 15/89 (16%) Frame = -2 Query: 533 PTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP---------------ST 399 P SP + P +P + SP + P SP SP + P SP+F+P S Sbjct: 60 PQSPGFEPQNPEFESQSPRFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSP 119 Query: 398 GYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 Y P PGY P S + + PG Sbjct: 120 RYEPQSPGYEPKSPGYESQSSRYESKSPG 148 Score = 53.9 bits (128), Expect = 9e-06 Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 15/89 (16%) Frame = -2 Query: 581 RFSPSSP--------YSPTSPSYSPTS-------PSYSPTSPSYSPSSPTYSPSSPYNSG 447 RF P SP + P SP ++P S P + P SP Y P SP Y P SP Sbjct: 78 RFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSPRYEPQSPGYEPKSPGYES 137 Query: 446 TSPDYSPSSPQFSPSTGYSPSQPGYSPSS 360 S Y SP GY P P + P + Sbjct: 138 QSSRYESKSP------GYEPQNPVFEPQN 160 [226][TOP] >UniRef100_Q3JTV6 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei 1710b RepID=Q3JTV6_BURP1 Length = 364 Score = 67.8 bits (164), Expect = 6e-10 Identities = 49/90 (54%), Positives = 61/90 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 252 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 304 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306 SP+ P S TS +P +D D G Q Sbjct: 305 TSPTSPTSPTSPTSPTSPGRSDQYDRRGRQ 334 Score = 65.9 bits (159), Expect = 2e-09 Identities = 47/88 (53%), Positives = 60/88 (68%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 243 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 295 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 SP+ P S TS +P + + PG Sbjct: 296 TSPTSPTSPTSPTSPTSPTSPTSPTSPG 323 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 183 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 235 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 236 TSPTSPTSPTSPTSPTSPTSPTSPTSP 262 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 186 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 238 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 239 TSPTSPTSPTSPTSPTSPTSPTSPTSP 265 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 189 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 241 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 242 TSPTSPTSPTSPTSPTSPTSPTSPTSP 268 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 192 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 244 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 245 TSPTSPTSPTSPTSPTSPTSPTSPTSP 271 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 195 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 247 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 248 TSPTSPTSPTSPTSPTSPTSPTSPTSP 274 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 198 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 250 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 251 TSPTSPTSPTSPTSPTSPTSPTSPTSP 277 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 201 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 253 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 254 TSPTSPTSPTSPTSPTSPTSPTSPTSP 280 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 204 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 256 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 257 TSPTSPTSPTSPTSPTSPTSPTSPTSP 283 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 213 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 265 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 266 TSPTSPTSPTSPTSPTSPTSPTSPTSP 292 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 216 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 268 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 269 TSPTSPTSPTSPTSPTSPTSPTSPTSP 295 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 219 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 271 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 272 TSPTSPTSPTSPTSPTSPTSPTSPTSP 298 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 222 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 274 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 275 TSPTSPTSPTSPTSPTSPTSPTSPTSP 301 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 225 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 277 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 278 TSPTSPTSPTSPTSPTSPTSPTSPTSP 304 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 228 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 280 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 281 TSPTSPTSPTSPTSPTSPTSPTSPTSP 307 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 231 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 283 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 284 TSPTSPTSPTSPTSPTSPTSPTSPTSP 310 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 234 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 286 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 287 TSPTSPTSPTSPTSPTSPTSPTSPTSP 313 Score = 60.8 bits (146), Expect = 7e-08 Identities = 45/86 (52%), Positives = 57/86 (66%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393 P SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 181 PVSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 233 Query: 392 SPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 234 SPTSPTSPTSPTSPTSPTSPTSPTSP 259 Score = 60.1 bits (144), Expect = 1e-07 Identities = 45/89 (50%), Positives = 57/89 (64%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 R P P SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP+ Sbjct: 175 RRRPRRPVSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPT 227 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 + SP+ P S TS +P + + P Sbjct: 228 SPTSPTSPTSPTSPTSPTSPTSPTSPTSP 256 [227][TOP] >UniRef100_B1HHT1 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HHT1_BURPS Length = 282 Score = 67.8 bits (164), Expect = 6e-10 Identities = 49/90 (54%), Positives = 61/90 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 170 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 222 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306 SP+ P S TS +P +D D G Q Sbjct: 223 TSPTSPTSPTSPTSPTSPGRSDQYDRRGRQ 252 Score = 65.1 bits (157), Expect = 4e-09 Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 2/90 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYN--SGTSPDYSPSSPQFSPS 402 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP + S TSP SP+SP SP+ Sbjct: 158 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSPTSPTSPTSPT-SPTSPT-SPT 211 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 + SP+ P S TS +P + + PG Sbjct: 212 SPTSPTSPTSPTSPTSPTSPTSPTSPTSPG 241 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 128 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 180 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 181 TSPTSPTSPTSPTSPTSPTSPTSPTSP 207 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 131 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 183 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 184 TSPTSPTSPTSPTSPTSPTSPTSPTSP 210 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 134 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 186 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 187 TSPTSPTSPTSPTSPTSPTSPTSPTSP 213 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 137 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 189 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 190 TSPTSPTSPTSPTSPTSPTSPTSPTSP 216 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 140 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 192 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 193 TSPTSPTSPTSPTSPTSPTSPTSPTSP 219 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 143 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 195 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 196 TSPTSPTSPTSPTSPTSPTSPTSPTSP 222 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 146 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 198 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 199 TSPTSPTSPTSPTSPTSPTSPTSPTSP 225 Score = 63.5 bits (153), Expect = 1e-08 Identities = 46/87 (52%), Positives = 59/87 (67%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SP+SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 149 SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSP 201 Query: 395 YSPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 202 TSPTSPTSPTSPTSPTSPTSPTSPTSP 228 Score = 60.8 bits (146), Expect = 7e-08 Identities = 45/86 (52%), Positives = 57/86 (66%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393 P SP SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP++ Sbjct: 126 PVSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPTSPT 178 Query: 392 SPSQPGYSPSSTSQYTPKTNDNKDDP 315 SP+ P S TS +P + + P Sbjct: 179 SPTSPTSPTSPTSPTSPTSPTSPTSP 204 Score = 60.1 bits (144), Expect = 1e-07 Identities = 45/89 (50%), Positives = 57/89 (64%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 R P P SPTSP+ SPTSP+ SPTSP+ SP+SPT SP+SP S TSP SP+SP SP+ Sbjct: 120 RRRPRRPVSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPT-SPT 172 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 + SP+ P S TS +P + + P Sbjct: 173 SPTSPTSPTSPTSPTSPTSPTSPTSPTSP 201 [228][TOP] >UniRef100_Q7XRB2 OSJNBa0006B20.10 protein n=3 Tax=Oryza sativa RepID=Q7XRB2_ORYSJ Length = 335 Score = 67.8 bits (164), Expect = 6e-10 Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 3/85 (3%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQ---F 411 R + S YSP SP SP Y+P SPS +SP Y+P SP SPDY+P+SP Sbjct: 113 RRAASPDYSPESPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAA 172 Query: 410 SPSTGYSPSQPGYSPSSTSQYTPKT 336 + S Y+P P +++ Y+P T Sbjct: 173 ASSPDYTPESPPRRRAASPDYSPST 197 Score = 65.9 bits (159), Expect = 2e-09 Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 15/97 (15%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP----- 417 R + S YSP++P SP YSP++P +SP YSPS+P SPDY+P SP Sbjct: 186 RRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAA 245 Query: 416 -----QFSP-----STGYSPSQPGYSPSSTSQYTPKT 336 Q +P S Y+PS P +++ YTP T Sbjct: 246 SPDYTQMTPPRRAASPDYTPSTPPPPRAASPDYTPST 282 Score = 65.5 bits (158), Expect = 3e-09 Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 1/83 (1%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS-PQFSP 405 R + S Y+P SP SP YSP SP +SP Y+P SP SPDYSP S P+ + Sbjct: 71 RRAASPDYTPESPPRRAASPDYSPASPPRRAASPDYTPESPPRRAASPDYSPESPPRRAA 130 Query: 404 STGYSPSQPGYSPSSTSQYTPKT 336 S Y+P+ P +S YTP++ Sbjct: 131 SPDYTPASPSRRAAS-PDYTPES 152 Score = 65.1 bits (157), Expect = 4e-09 Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 16/98 (16%) Frame = -2 Query: 581 RFSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSP-QFSP 405 R + S YSP SP SP Y+P SP +SP YSP SP SPDY+P+SP + + Sbjct: 85 RRAASPDYSPASPPRRAASPDYTPESPPRRAASPDYSPESPPRRAASPDYTPASPSRRAA 144 Query: 404 STGYSP-------SQPGYSPSSTSQ--------YTPKT 336 S Y+P + P Y+P+S S+ YTP++ Sbjct: 145 SPDYTPESPPRRAASPDYTPASPSRRAAASSPDYTPES 182 Score = 62.0 bits (149), Expect = 3e-08 Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 12/97 (12%) Frame = -2 Query: 575 SPSSPYSPTSPSYSP--------TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSS 420 SPS + +SP Y+P SP YSP++P +SP YSPS+P SPDYSPS+ Sbjct: 166 SPSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPST 225 Query: 419 -PQFSPSTGYSPSQP---GYSPSSTSQYTPKTNDNKD 321 P+ + S Y+P P SP T P+ + D Sbjct: 226 PPRRAASPDYTPMSPPRRAASPDYTQMTPPRRAASPD 262 Score = 60.5 bits (145), Expect = 9e-08 Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 25/106 (23%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSP-------SSPTYSPSSPYN--SGTSPDYS 429 +SP SP SP Y+P SPS SP Y+P +SP Y+P+SP + +SPDY+ Sbjct: 120 YSPESPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAAASSPDYT 179 Query: 428 PSSP--QFSPSTGYSPS-------QPGYSPS------STSQYTPKT 336 P SP + + S YSPS P YSPS ++ Y+P T Sbjct: 180 PESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPST 225 Score = 57.8 bits (138), Expect = 6e-07 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 16/94 (17%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 +SPS+P YSP++P SP Y+P SP +SP Y+ +P SPDY+PS Sbjct: 207 YSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDYTQMTPPRRAASPDYTPS 266 Query: 422 --------SPQFSPSTGYSPSQPGYSPSSTSQYT 345 SP ++PST PS P PS+ +T Sbjct: 267 TPPPPRAASPDYTPST--PPSSP--LPSAAESFT 296 [229][TOP] >UniRef100_Q7RJS0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RJS0_PLAYO Length = 2312 Score = 67.8 bits (164), Expect = 6e-10 Identities = 48/101 (47%), Positives = 55/101 (54%), Gaps = 32/101 (31%) Frame = -2 Query: 578 FSPSSPYSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSP 480 +SPS YSPTSP+ YSPTSP YS TSP YSP+SP Sbjct: 2148 YSPS--YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSP 2205 Query: 479 TYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372 YSPSSP N+ +SP YSP +SP+FSP S YS S P Y Sbjct: 2206 QYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 2246 Score = 66.2 bits (160), Expect = 2e-09 Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 7/80 (8%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402 S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S TSP YS SSP + + Sbjct: 2190 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN 2249 Query: 401 ---TGYSPSQPGYSPSSTSQ 351 G +P P Y S Q Sbjct: 2250 ENMAGKNPLSPAYMLQSRVQ 2269 Score = 63.9 bits (154), Expect = 9e-09 Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 15/78 (19%) Frame = -2 Query: 548 SPSYSPTSPSYSPTSPS-YSPSSP------------TYSPSSPYNSGTSPDYSPSSPQFS 408 SPSYSPTSP+Y+ + + YSP+SP Y+ SP S TSP YSP+SPQ+S Sbjct: 2149 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYS 2208 Query: 407 PSTGY--SPSQPGYSPSS 360 PS+ +PS P YSP S Sbjct: 2209 PSSPVPNNPSSPQYSPYS 2226 [230][TOP] >UniRef100_B8BEN2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=B8BEN2_ORYSI Length = 519 Score = 67.4 bits (163), Expect = 8e-10 Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 2/72 (2%) Frame = -2 Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-T 399 PS P P+ PSY P+ PSY P+ P Y+P P Y+P P + P+YSP P + PS Sbjct: 293 PSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPP 352 Query: 398 GYSPSQPGYSPS 363 Y+P P Y PS Sbjct: 353 QYAPQPPSYVPS 364 Score = 65.9 bits (159), Expect = 2e-09 Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 2/82 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 + PS P Y P+ P Y+P P Y+P P PS P YSP P + P Y+P P + PS Sbjct: 305 YEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPS 364 Query: 401 TG-YSPSQPGYSPSSTSQYTPK 339 Y+P PG +P S +Y P+ Sbjct: 365 PPVYAPYPPGITP-SPPEYAPE 385 Score = 64.7 bits (156), Expect = 5e-09 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 1/76 (1%) Frame = -2 Query: 566 SPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS-TGYS 390 +PY P+ P P+ PSY P+ PSY PS P Y+P P + P PS P++SP Y Sbjct: 290 TPY-PSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYV 348 Query: 389 PSQPGYSPSSTSQYTP 342 PS P Y+P S Y P Sbjct: 349 PSPPQYAPQPPS-YVP 363 Score = 60.5 bits (145), Expect = 9e-08 Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 2/81 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 ++P P Y+P P P+ P YSP PSY PS P Y+P P + P Y+P P +PS Sbjct: 319 YAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPVYAPYPPGITPS 378 Query: 401 -TGYSPSQPGYSPSSTSQYTP 342 Y+P P P Y P Sbjct: 379 PPEYAPEPPPGPPGGGGGYLP 399 Score = 57.8 bits (138), Expect = 6e-07 Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Frame = -2 Query: 572 PSSP-YSPTSPSYSP--TSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPS 402 PS P +P+ P +P + P P+ PSY PS P+Y PS P + P Y+P P PS Sbjct: 277 PSPPEVTPSPPEITPYPSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPS 336 Query: 401 -TGYSPSQPGYSPSSTSQYTPK 339 YSP P Y P S QY P+ Sbjct: 337 PPEYSPEPPSYVP-SPPQYAPQ 357 [231][TOP] >UniRef100_Q4Y307 Putative uncharacterized protein n=1 Tax=Plasmodium chabaudi RepID=Q4Y307_PLACH Length = 133 Score = 67.4 bits (163), Expect = 8e-10 Identities = 42/80 (52%), Positives = 47/80 (58%), Gaps = 7/80 (8%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402 S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S TSP YS SSP + S Sbjct: 11 SXVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 70 Query: 401 ---TGYSPSQPGYSPSSTSQ 351 G +P P Y S Q Sbjct: 71 ENMAGKNPLSPAYMLQSRVQ 90 Score = 61.6 bits (148), Expect = 4e-08 Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Frame = -2 Query: 560 YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-STGYSPS 384 Y+ S YS TSP YSPTSP YSPSSP P++P + SP YS +SP+FSP S YS S Sbjct: 7 YNIMSXVYSVTSPKYSPTSPQYSPSSPV--PNNPSSPQYSP-YSITSPKFSPTSPAYSIS 63 Query: 383 QPGYSPS 363 P Y S Sbjct: 64 SPVYDKS 70 [232][TOP] >UniRef100_C6F1F7 DNA-directed RNA polymerase n=1 Tax=Plasmodium gallinaceum RepID=C6F1F7_PLAGA Length = 2200 Score = 67.4 bits (163), Expect = 8e-10 Identities = 49/109 (44%), Positives = 56/109 (51%), Gaps = 30/109 (27%) Frame = -2 Query: 578 FSPSSPYSPTSPS-------YSPTSPS------------------YSPTSPSYSPSSPTY 474 +SPS YSPTSPS YSPTSP YS TSP YSP SP Y Sbjct: 2039 YSPS--YSPTSPSYNADNVYYSPTSPKNQMDDVKSNIKYNVMSPVYSVTSPKYSPMSPQY 2096 Query: 473 SPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGYSPSSTSQYTP 342 SP+SP N+ SP YSP +SP+FSP S YS S P Y ++ P Sbjct: 2097 SPTSPVANNPGSPHYSPYSITSPKFSPTSPAYSISSPVYDKNAVLNNQP 2145 [233][TOP] >UniRef100_C6F098 RNA polymerase II (Fragment) n=2 Tax=Plasmodium vinckei RepID=C6F098_PLAVN Length = 161 Score = 67.4 bits (163), Expect = 8e-10 Identities = 42/80 (52%), Positives = 47/80 (58%), Gaps = 7/80 (8%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402 S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S TSP YS SSP + S Sbjct: 39 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 98 Query: 401 ---TGYSPSQPGYSPSSTSQ 351 G +P P Y S Q Sbjct: 99 ENMAGKNPLSPAYMLQSRVQ 118 Score = 67.0 bits (162), Expect = 1e-09 Identities = 46/98 (46%), Positives = 52/98 (53%), Gaps = 32/98 (32%) Frame = -2 Query: 560 YSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 462 YSPTSP+ YSPTSP YS TSP YSP+SP YSPSS Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQAGDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60 Query: 461 PY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGYSPS 363 P N+ +SP YSP +SP+FSP S YS S P Y S Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS 98 [234][TOP] >UniRef100_UPI0000D9F0D9 PREDICTED: similar to zinc finger protein 239 (predicted) n=1 Tax=Macaca mulatta RepID=UPI0000D9F0D9 Length = 650 Score = 67.0 bits (162), Expect = 1e-09 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 2/87 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 F P SP + P SP + P SP + SP P SP ++P SP + SP++ SP++ P Sbjct: 182 FEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQ 241 Query: 404 STGYSPSQPGYSPSSTSQYTPKTNDNK 324 S GY P P Y S +S+Y + + K Sbjct: 242 SPGYEPRSPSYE-SESSRYESQNPELK 267 Score = 63.5 bits (153), Expect = 1e-08 Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 2/88 (2%) Frame = -2 Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPST 399 P SP + P SP + P SP + P SP + SP P SP + SP+ SP+F S S Sbjct: 177 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 236 Query: 398 GYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 Y P PGY P S S + + +P Sbjct: 237 RYEPQSPGYEPRSPSYESESSRYESQNP 264 [235][TOP] >UniRef100_Q1WKU0 Putative RNA polymerase II 215 kD subunit (Fragment) n=2 Tax=melanogaster subgroup RepID=Q1WKU0_DROYA Length = 766 Score = 67.0 bits (162), Expect = 1e-09 Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 1/71 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-Y 393 SSP SP PS SP P+ SPSYSP+SP Y+ SSP G SP+YSPSSP +SP++ Y Sbjct: 698 SSPSSP-GPSMSPYFPASPSVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLY 754 Query: 392 SPSQPGYSPSS 360 + + P Y+ ++ Sbjct: 755 ASASPRYASTT 765 Score = 65.5 bits (158), Expect = 3e-09 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 660 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 719 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360 YSP+SP ++ S+ YSPS P YSP+S Sbjct: 720 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 751 Score = 63.2 bits (152), Expect = 1e-08 Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 6/59 (10%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSPDYSPSSP 417 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Y+ ++P Sbjct: 708 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTP 766 [236][TOP] >UniRef100_C5Y8R4 Putative uncharacterized protein Sb06g017200 n=1 Tax=Sorghum bicolor RepID=C5Y8R4_SORBI Length = 367 Score = 66.6 bits (161), Expect = 1e-09 Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 20/101 (19%) Frame = -2 Query: 578 FSPSSP-YSPTSPS--------YSPTSPSYSPT---------SPSYSPSSPTYSPSSPYN 453 +SP++P Y+P +PS YSP SP Y+P SP YSP+SP Y+P +P + Sbjct: 133 YSPATPEYTPLTPSSQRSGSPVYSPASPEYTPLLTPSSRRFGSPDYSPASPEYTPLTPSS 192 Query: 452 SGT-SPDYSPSSPQFSPSTGYSPS-QPGYSPSSTSQYTPKT 336 + SP YSP SP+++P T S P Y+P++ + YTP++ Sbjct: 193 QRSGSPVYSPGSPEYTPLTPPKRSGSPAYTPAA-ANYTPRS 232 Score = 58.5 bits (140), Expect = 4e-07 Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 28/103 (27%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSP---------SSPTYSPSSP---------YN 453 +SP++P T S SP YSP SP Y+P SP YSP++P Sbjct: 90 YSPATPDPATPSSQRSGSPVYSPASPEYTPLLKPSSRRFGSPDYSPATPEYTPLTPSSQR 149 Query: 452 SGTSPDYSPSSPQFSP----------STGYSPSQPGYSPSSTS 354 SG SP YSP+SP+++P S YSP+ P Y+P + S Sbjct: 150 SG-SPVYSPASPEYTPLLTPSSRRFGSPDYSPASPEYTPLTPS 191 Score = 57.4 bits (137), Expect = 8e-07 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 18/83 (21%) Frame = -2 Query: 578 FSPSSP-YSPT---------SPSYSPTSPSYSPTSPS--------YSPSSPTYSPSSPYN 453 +SP+SP Y+P SP YSP SP Y+P +PS YSP SP Y+P +P Sbjct: 155 YSPASPEYTPLLTPSSRRFGSPDYSPASPEYTPLTPSSQRSGSPVYSPGSPEYTPLTPPK 214 Query: 452 SGTSPDYSPSSPQFSPSTGYSPS 384 SP Y+P++ ++P + S S Sbjct: 215 RSGSPAYTPAAANYTPRSPSSSS 237 [237][TOP] >UniRef100_Q25655 RNA polymerase largest subunit (Fragment) n=1 Tax=Plasmodium berghei RepID=Q25655_PLABE Length = 204 Score = 66.6 bits (161), Expect = 1e-09 Identities = 47/101 (46%), Positives = 55/101 (54%), Gaps = 32/101 (31%) Frame = -2 Query: 578 FSPSSPYSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSP 480 +SPS YSPTSP+ YSPTSP YS TSP YSP+SP Sbjct: 40 YSPS--YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSP 97 Query: 479 TYSPSSPY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372 YSP+SP N+ +SP YSP +SP+FSP S YS S P Y Sbjct: 98 KYSPTSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 138 Score = 64.7 bits (156), Expect = 5e-09 Identities = 44/103 (42%), Positives = 53/103 (51%), Gaps = 27/103 (26%) Frame = -2 Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSG-- 447 +SP+SP Y+ SP YS TSP YSPTSP YSP+SP +PSSP S Sbjct: 59 YSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYSPTSPVPNNPSSPQYSPYS 118 Query: 446 -TSPDYSPSSPQFSPS----------TGYSPSQPGYSPSSTSQ 351 TSP +SP+SP +S S TG +P P Y S Q Sbjct: 119 ITSPKFSPTSPAYSISSPVYDKNENMTGKNPLSPAYMLQSRVQ 161 Score = 62.4 bits (150), Expect = 2e-08 Identities = 43/95 (45%), Positives = 50/95 (52%), Gaps = 32/95 (33%) Frame = -2 Query: 548 SPSYSPTSPS--------YSPTSPS-------------------YSPSSPTYSPSSPYNS 450 SPSYSPTSP+ YSPTSP YS +SP YSP+SP S Sbjct: 41 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYS 100 Query: 449 GTSP-DYSPSSPQFSP----STGYSPSQPGYSPSS 360 TSP +PSSPQ+SP S +SP+ P YS SS Sbjct: 101 PTSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISS 135 [238][TOP] >UniRef100_C6F096 RNA polymerase II (Fragment) n=1 Tax=Plasmodium yoelii nigeriensis RepID=C6F096_9APIC Length = 161 Score = 66.2 bits (160), Expect = 2e-09 Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 7/80 (8%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402 S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S TSP YS SSP + + Sbjct: 39 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKT 98 Query: 401 ---TGYSPSQPGYSPSSTSQ 351 G +P P Y S Q Sbjct: 99 ENMAGKNPLSPAYMLQSRVQ 118 Score = 65.9 bits (159), Expect = 2e-09 Identities = 45/95 (47%), Positives = 51/95 (53%), Gaps = 32/95 (33%) Frame = -2 Query: 560 YSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 462 YSPTSP+ YSPTSP YS TSP YSP+SP YSPSS Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60 Query: 461 PY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372 P N+ +SP YSP +SP+FSP S YS S P Y Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95 [239][TOP] >UniRef100_C6F093 RNA polymerase II (Fragment) n=2 Tax=Plasmodium yoelii RepID=C6F093_PLAYO Length = 161 Score = 66.2 bits (160), Expect = 2e-09 Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 7/80 (8%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSP-SYSPSSPTYSP---SSPYNSGTSPDYSPSSPQFSPS 402 S YS TSP YSPTSP YSP+SP +PSSP YSP +SP S TSP YS SSP + + Sbjct: 39 SPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN 98 Query: 401 ---TGYSPSQPGYSPSSTSQ 351 G +P P Y S Q Sbjct: 99 ENMAGKNPLSPAYMLQSRVQ 118 Score = 65.9 bits (159), Expect = 2e-09 Identities = 45/95 (47%), Positives = 51/95 (53%), Gaps = 32/95 (33%) Frame = -2 Query: 560 YSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 462 YSPTSP+ YSPTSP YS TSP YSP+SP YSPSS Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60 Query: 461 PY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372 P N+ +SP YSP +SP+FSP S YS S P Y Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95 [240][TOP] >UniRef100_A9U3I4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U3I4_PHYPA Length = 291 Score = 65.9 bits (159), Expect = 2e-09 Identities = 46/80 (57%), Positives = 54/80 (67%), Gaps = 6/80 (7%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPT----SPSYSPSSPTYS--PSSPYNSGTSPDYSPSSPQ 414 S SSP +P+SPSYS SP YSPT SPS +PSSPTYS P SP SG SP +PSSP Sbjct: 185 SSSSPTTPSSPSYS--SPPYSPTPSDPSPS-TPSSPTYSSPPYSPTPSGPSPP-TPSSPT 240 Query: 413 FSPSTGYSPSQPGYSPSSTS 354 +S S YSP+ G SP++ S Sbjct: 241 YS-SPPYSPTPSGSSPTTPS 259 Score = 64.7 bits (156), Expect = 5e-09 Identities = 46/91 (50%), Positives = 53/91 (58%), Gaps = 6/91 (6%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYS--PTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 S PYSPT SP+SP+YS P SP+ S SSPT +PSSP S +SP YSP+ SPST Sbjct: 158 SPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPT-TPSSP--SYSSPPYSPTPSDPSPSTP 214 Query: 395 YSP--SQPGYSP--SSTSQYTPKTNDNKDDP 315 SP S P YSP S S TP + P Sbjct: 215 SSPTYSSPPYSPTPSGPSPPTPSSPTYSSPP 245 Score = 64.3 bits (155), Expect = 7e-09 Identities = 43/79 (54%), Positives = 51/79 (64%), Gaps = 2/79 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYS--PSSPYNSGTSPDYSPSSPQFSPS 402 +PS P SP+SP+YS SP YSPT SPSSPTYS P SP S +SP +PSSP +S S Sbjct: 145 APSGP-SPSSPTYS--SPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPT-TPSSPSYS-S 199 Query: 401 TGYSPSQPGYSPSSTSQYT 345 YSP+ SPS+ S T Sbjct: 200 PPYSPTPSDPSPSTPSSPT 218 Score = 63.5 bits (153), Expect = 1e-08 Identities = 49/107 (45%), Positives = 57/107 (53%), Gaps = 20/107 (18%) Frame = -2 Query: 575 SPSSPYSPTSPS-----YSPTSPSYSPTSPS-YSPSSPTYS--PSSPYNSGTSPD----- 435 S SSP +P+SP+ YSP S SPT+PS SPSSPTYS P SP SG+SP Sbjct: 117 SSSSPTTPSSPTYSSPPYSPAPSSPSPTAPSGPSPSSPTYSSPPYSPTPSGSSPSSPTYS 176 Query: 434 ---YSPSSPQFSPSTGYSP--SQPGYS--PSSTSQYTPKTNDNKDDP 315 YSP+ SP+T SP S P YS PS S TP + P Sbjct: 177 SPPYSPTPSSSSPTTPSSPSYSSPPYSPTPSDPSPSTPSSPTYSSPP 223 Score = 63.5 bits (153), Expect = 1e-08 Identities = 43/86 (50%), Positives = 51/86 (59%), Gaps = 8/86 (9%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYS--PSSPTYSPSSPYN----SGTSPDYSPSSPQ 414 SPSSP + +SP YSPT SP+SP+YS P SPT S SSP S +SP YSP+ Sbjct: 150 SPSSP-TYSSPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPTTPSSPSYSSPPYSPTPSD 208 Query: 413 FSPSTGYSP--SQPGYSPSSTSQYTP 342 SPST SP S P YSP+ + P Sbjct: 209 PSPSTPSSPTYSSPPYSPTPSGPSPP 234 Score = 62.8 bits (151), Expect = 2e-08 Identities = 45/90 (50%), Positives = 53/90 (58%), Gaps = 11/90 (12%) Frame = -2 Query: 578 FSPSSPY--SPTSPSYSPTSPSYSPTSPSYSP---SSPTYS--PSSPYNSGTSPDY---- 432 +SP +P SP +PS S +SP YSPT S SP SSPTYS P SP S SP Sbjct: 90 YSPGTPSGGSPVTPSPSYSSPPYSPTPSSSSPTTPSSPTYSSPPYSPAPSSPSPTAPSGP 149 Query: 431 SPSSPQFSPSTGYSPSQPGYSPSSTSQYTP 342 SPSSP +S S YSP+ G SPSS + +P Sbjct: 150 SPSSPTYS-SPPYSPTPSGSSPSSPTYSSP 178 Score = 62.4 bits (150), Expect = 2e-08 Identities = 43/78 (55%), Positives = 49/78 (62%), Gaps = 4/78 (5%) Frame = -2 Query: 575 SPSSPYSPT--SPSYSPTSPSYSPTSPSYSPSSPTYS--PSSPYNSGTSPDYSPSSPQFS 408 SPS+P SPT SP YSPT SP +PSSPTYS P SP SG+SP +PSSP +S Sbjct: 210 SPSTPSSPTYSSPPYSPTPSGPSPP----TPSSPTYSSPPYSPTPSGSSPT-TPSSPSYS 264 Query: 407 PSTGYSPSQPGYSPSSTS 354 S YSP+ G SPS S Sbjct: 265 -SPPYSPTPSGGSPSGGS 281 Score = 60.8 bits (146), Expect = 7e-08 Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 11/96 (11%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPT--SPSYSPSSPTYSPSSPYN-SGTSPDYSPSSPQFSPS- 402 S PYSPT S SPT+PS SPT SP YSP+ + SP++P S +SP YS SP +SP+ Sbjct: 109 SPPYSPTPSSSSPTTPS-SPTYSSPPYSPAPSSPSPTAPSGPSPSSPTYS--SPPYSPTP 165 Query: 401 TGYSPSQPGYS-------PSSTSQYTPKTNDNKDDP 315 +G SPS P YS PSS+S TP + P Sbjct: 166 SGSSPSSPTYSSPPYSPTPSSSSPTTPSSPSYSSPP 201 Score = 55.5 bits (132), Expect = 3e-06 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 8/81 (9%) Frame = -2 Query: 572 PSSPYSPT-SPSY----SPTSPSYSPTSPSYSPSSPTY-SPSSPYNSGTSPDYSPSSPQF 411 P++PY+P+ SP SP +P+ +SP YSP +P+ SP +P S +SP YSP+ Sbjct: 60 PATPYTPSYSPPVASDPSPVTPTPVYSSPPYSPGTPSGGSPVTPSPSYSSPPYSPTPSSS 119 Query: 410 SPSTGYSP--SQPGYSPSSTS 354 SP+T SP S P YSP+ +S Sbjct: 120 SPTTPSSPTYSSPPYSPAPSS 140 Score = 54.3 bits (129), Expect = 7e-06 Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 5/92 (5%) Frame = -2 Query: 575 SPSSPYSPT----SPSYSPTSPSY-SPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 S SP +PT SP YSP +PS SP +PS S SSP YSP+ +S T+P SSP + Sbjct: 74 SDPSPVTPTPVYSSPPYSPGTPSGGSPVTPSPSYSSPPYSPTPSSSSPTTP----SSPTY 129 Query: 410 SPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDP 315 S S YSP+ SP++ S +P + P Sbjct: 130 S-SPPYSPAPSSPSPTAPSGPSPSSPTYSSPP 160 [241][TOP] >UniRef100_C6F091 RNA polymerase II (Fragment) n=1 Tax=Plasmodium berghei RepID=C6F091_PLABE Length = 161 Score = 65.9 bits (159), Expect = 2e-09 Identities = 45/95 (47%), Positives = 51/95 (53%), Gaps = 32/95 (33%) Frame = -2 Query: 560 YSPTSPS--------YSPTSPS-------------------YSPTSPSYSPSSPTYSPSS 462 YSPTSP+ YSPTSP YS TSP YSP+SP YSPSS Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60 Query: 461 PY-NSGTSPDYSP---SSPQFSP-STGYSPSQPGY 372 P N+ +SP YSP +SP+FSP S YS S P Y Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95 Score = 65.9 bits (159), Expect = 2e-09 Identities = 45/103 (43%), Positives = 53/103 (51%), Gaps = 27/103 (26%) Frame = -2 Query: 578 FSPSSP-------------YSPTSPSYSPTSPSYSPTSPSYSPSSPT-YSPSSPYNSG-- 447 +SP+SP Y+ SP YS TSP YSPTSP YSPSSP +PSSP S Sbjct: 16 YSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQYSPYS 75 Query: 446 -TSPDYSPSSPQFSPS----------TGYSPSQPGYSPSSTSQ 351 TSP +SP+SP +S S TG +P P Y S Q Sbjct: 76 ITSPKFSPTSPAYSISSPVYDKNENMTGKNPLSPAYMLQSRVQ 118 [242][TOP] >UniRef100_A0E2M3 Chromosome undetermined scaffold_75, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0E2M3_PARTE Length = 288 Score = 65.9 bits (159), Expect = 2e-09 Identities = 33/90 (36%), Positives = 36/90 (40%), Gaps = 10/90 (11%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPT----------SPSYSPSSPTYSPSSPYNSGTSPDYS 429 + P PY P P Y PT P Y P P Y P P Y P P P Y Sbjct: 154 YPPQQPYPPQQPGY-PTQPGYPPQPGYPAQPYPQQPGYPPQQPGYPPQQPGYPPQQPGYP 212 Query: 428 PSSPQFSPSTGYSPSQPGYSPSSTSQYTPK 339 P P + P GY P QPGY P Y P+ Sbjct: 213 PQQPGYPPQPGYPPQQPGYPPQQPG-YPPQ 241 Score = 60.8 bits (146), Expect = 7e-08 Identities = 32/82 (39%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Frame = -2 Query: 578 FSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP- 405 + P P Y P P Y P P Y P P Y P P Y P P P Y P P + P Sbjct: 190 YPPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQ-PGYPPQQPGYPPQQPGYPPQQPGYPPQ 248 Query: 404 STGYSPSQPGYSPSSTSQYTPK 339 GY P QPGY QY P+ Sbjct: 249 QPGYPPQQPGY---PAQQYPPQ 267 Score = 56.6 bits (135), Expect = 1e-06 Identities = 27/69 (39%), Positives = 30/69 (43%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 + P P P P Y P P Y P P Y P P Y P P P Y + Q+ P Sbjct: 211 YPPQQPGYPPQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGY--PAQQYPPQQ 268 Query: 398 GYSPSQPGY 372 GY P QPGY Sbjct: 269 GY-PPQPGY 276 Score = 55.1 bits (131), Expect = 4e-06 Identities = 35/90 (38%), Positives = 39/90 (43%), Gaps = 1/90 (1%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP-S 402 + P Y P P Y P P Y PT P Y P P Y P+ PY P Y P P + P Sbjct: 148 YPPQPGYPPQQP-YPPQQPGY-PTQPGYPPQ-PGY-PAQPYPQ--QPGYPPQQPGYPPQQ 201 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 GY P QPGY P Y P+ PG Sbjct: 202 PGYPPQQPGYPPQQPG-YPPQPGYPPQQPG 230 [243][TOP] >UniRef100_UPI0001B7BF92 zinc finger protein 768 n=1 Tax=Rattus norvegicus RepID=UPI0001B7BF92 Length = 570 Score = 65.5 bits (158), Expect = 3e-09 Identities = 34/100 (34%), Positives = 42/100 (42%), Gaps = 9/100 (9%) Frame = -2 Query: 578 FSPSSP--------YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS 423 F P SP + P SP + SP + P SP ++P SP P SP S Y P Sbjct: 67 FEPQSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSSRYEPQ 126 Query: 422 SPQFSP-STGYSPSQPGYSPSSTSQYTPKTNDNKDDPGTQ 306 SP + P S GY P P Y P S + PG + Sbjct: 127 SPGYDPKSPGYEPGSPRYEPKSPGYGSKSPEFESQSPGCE 166 Score = 65.1 bits (157), Expect = 4e-09 Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 8/87 (9%) Frame = -2 Query: 572 PSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF-SPST 399 P SP + P SP + SP + P SP + SP + P SP + SP+ P SP+F S S+ Sbjct: 62 PQSPGFEPQSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSS 121 Query: 398 GYSPSQPGYSPSS------TSQYTPKT 336 Y P PGY P S + +Y PK+ Sbjct: 122 RYEPQSPGYDPKSPGYEPGSPRYEPKS 148 Score = 63.5 bits (153), Expect = 1e-08 Identities = 33/92 (35%), Positives = 40/92 (43%), Gaps = 2/92 (2%) Frame = -2 Query: 581 RFSPSSP-YSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 RF P SP + SP + P SP ++P SP P SP + S SP Y P SP + P Sbjct: 80 RFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSSRYEPQSPGYDPKSPGYEP 139 Query: 404 -STGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 S Y P PGY S + PG Sbjct: 140 GSPRYEPKSPGYGSKSPEFESQSPGCESQSPG 171 Score = 58.9 bits (141), Expect = 3e-07 Identities = 30/80 (37%), Positives = 36/80 (45%), Gaps = 8/80 (10%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF------ 411 PS ++P SP P SP + S Y P SP Y P SP SP Y P SP + Sbjct: 98 PSPEFAPRSPESDPQSPEFESQSSRYEPQSPGYDPKSPGYEPGSPRYEPKSPGYGSKSPE 157 Query: 410 --SPSTGYSPSQPGYSPSST 357 S S G PGY P ++ Sbjct: 158 FESQSPGCESQSPGYEPQNS 177 Score = 58.2 bits (139), Expect = 5e-07 Identities = 27/57 (47%), Positives = 28/57 (49%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 S SS Y P SP Y P SP Y P SP Y P SP Y SP SP SP + P Sbjct: 118 SQSSRYEPQSPGYDPKSPGYEPGSPRYEPKSPGYGSKSPEFESQSPGCESQSPGYEP 174 [244][TOP] >UniRef100_Q1WKU4 Putative RNA polymerase II 215 kD subunit (Fragment) n=1 Tax=Drosophila erecta RepID=Q1WKU4_DROER Length = 760 Score = 65.5 bits (158), Expect = 3e-09 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 19/92 (20%) Frame = -2 Query: 578 FSPS---SPYSPTSPSYSPT--------SPSYSPTSPSYSPSSP--TYSPSSPYNSGTSP 438 FSP S +P PS+SP+ SPS+SP P SPSSP + SP P + SP Sbjct: 660 FSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 719 Query: 437 DYSPSSPQFSPST------GYSPSQPGYSPSS 360 YSP+SP ++ S+ YSPS P YSP+S Sbjct: 720 SYSPTSPNYTASSPGGASPNYSPSSPNYSPTS 751 Score = 64.3 bits (155), Expect = 7e-09 Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG-Y 393 SSP SP PS SP P+ SPSYSP+SP Y+ SSP G SP+YSPSSP +SP++ Y Sbjct: 698 SSPSSP-GPSMSPYFPASPSVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLY 754 Query: 392 SPSQP 378 + + P Sbjct: 755 ASASP 759 Score = 57.8 bits (138), Expect = 6e-07 Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 6/52 (11%) Frame = -2 Query: 575 SPSSPYSPT-SPSYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYNSGTSP 438 SP P SP+ SPSYSPTSP+Y+ +SP +YSPSSP YSP+SP + SP Sbjct: 708 SPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASP 759 [245][TOP] >UniRef100_UPI000179248D PREDICTED: similar to RR2 cuticle protein 3 n=1 Tax=Acyrthosiphon pisum RepID=UPI000179248D Length = 299 Score = 65.1 bits (157), Expect = 4e-09 Identities = 37/78 (47%), Positives = 54/78 (69%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SPSSP +P++PS +P++PSYSP +PSYSP+ P YSP+ Y+ +P Y P+ P +SP+ Sbjct: 29 SPSSPSAPSAPS-APSAPSYSP-APSYSPA-PLYSPAPSYSP--APAYKPA-PSYSPAPS 82 Query: 395 YSPSQPGYSPSSTSQYTP 342 YSP+ P Y P+ + P Sbjct: 83 YSPA-PAYKPAPAYKPAP 99 Score = 61.6 bits (148), Expect = 4e-08 Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 3/81 (3%) Frame = -2 Query: 575 SPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 SPS+P +P++PSYSP +PSYSP +P YSP +P+YSP+ Y +P YSP +P +SP Sbjct: 32 SPSAPSAPSAPSAPSYSP-APSYSP-APLYSP-APSYSPAPAYK--PAPSYSP-APSYSP 85 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 + Y P+ P Y P+ + + +P Sbjct: 86 APAYKPA-PAYKPAPSYKPSP 105 Score = 58.2 bits (139), Expect = 5e-07 Identities = 36/77 (46%), Positives = 54/77 (70%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393 PS P SP+SPS +P++PS +P++PSYSP +P+YSP+ Y+ +P YSP +P + P+ Y Sbjct: 25 PSYP-SPSSPS-APSAPS-APSAPSYSP-APSYSPAPLYS--PAPSYSP-APAYKPAPSY 77 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+ + P Sbjct: 78 SPA-PSYSPAPAYKPAP 93 Score = 55.8 bits (133), Expect = 2e-06 Identities = 35/75 (46%), Positives = 49/75 (65%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP+ YSP +P YSP +PSYSP +P+Y P +P+YSP+ Y+ +P Y P +P + P+ Sbjct: 47 YSPAPSYSP-APLYSP-APSYSP-APAYKP-APSYSPAPSYS--PAPAYKP-APAYKPAP 99 Query: 398 GYSPSQPGYSPSSTS 354 Y PS P YS S S Sbjct: 100 SYKPS-PSYSAPSYS 113 [246][TOP] >UniRef100_C4WTF5 ACYPI006712 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WTF5_ACYPI Length = 304 Score = 65.1 bits (157), Expect = 4e-09 Identities = 37/78 (47%), Positives = 54/78 (69%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SPSSP +P++PS +P++PSYSP +PSYSP+ P YSP+ Y+ +P Y P+ P +SP+ Sbjct: 29 SPSSPSAPSAPS-APSAPSYSP-APSYSPA-PLYSPAPSYSP--APAYKPA-PSYSPAPS 82 Query: 395 YSPSQPGYSPSSTSQYTP 342 YSP+ P Y P+ + P Sbjct: 83 YSPA-PAYKPAPAYKPAP 99 Score = 61.6 bits (148), Expect = 4e-08 Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 3/81 (3%) Frame = -2 Query: 575 SPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 SPS+P +P++PSYSP +PSYSP +P YSP +P+YSP+ Y +P YSP +P +SP Sbjct: 32 SPSAPSAPSAPSAPSYSP-APSYSP-APLYSP-APSYSPAPAYK--PAPSYSP-APSYSP 85 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 + Y P+ P Y P+ + + +P Sbjct: 86 APAYKPA-PAYKPAPSYKPSP 105 Score = 58.2 bits (139), Expect = 5e-07 Identities = 36/77 (46%), Positives = 54/77 (70%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393 PS P SP+SPS +P++PS +P++PSYSP +P+YSP+ Y+ +P YSP +P + P+ Y Sbjct: 25 PSYP-SPSSPS-APSAPS-APSAPSYSP-APSYSPAPLYS--PAPSYSP-APAYKPAPSY 77 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+ + P Sbjct: 78 SPA-PSYSPAPAYKPAP 93 Score = 55.8 bits (133), Expect = 2e-06 Identities = 35/75 (46%), Positives = 49/75 (65%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP+ YSP +P YSP +PSYSP +P+Y P +P+YSP+ Y+ +P Y P +P + P+ Sbjct: 47 YSPAPSYSP-APLYSP-APSYSP-APAYKP-APSYSPAPSYS--PAPAYKP-APAYKPAP 99 Query: 398 GYSPSQPGYSPSSTS 354 Y PS P YS S S Sbjct: 100 SYKPS-PSYSAPSYS 113 [247][TOP] >UniRef100_C4WTF4 ACYPI006712 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WTF4_ACYPI Length = 299 Score = 65.1 bits (157), Expect = 4e-09 Identities = 37/78 (47%), Positives = 54/78 (69%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTG 396 SPSSP +P++PS +P++PSYSP +PSYSP+ P YSP+ Y+ +P Y P+ P +SP+ Sbjct: 29 SPSSPSAPSAPS-APSAPSYSP-APSYSPA-PLYSPAPSYSP--APAYKPA-PSYSPAPS 82 Query: 395 YSPSQPGYSPSSTSQYTP 342 YSP+ P Y P+ + P Sbjct: 83 YSPA-PAYKPAPAYKPAP 99 Score = 61.6 bits (148), Expect = 4e-08 Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 3/81 (3%) Frame = -2 Query: 575 SPSSPY---SPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSP 405 SPS+P +P++PSYSP +PSYSP +P YSP +P+YSP+ Y +P YSP +P +SP Sbjct: 32 SPSAPSAPSAPSAPSYSP-APSYSP-APLYSP-APSYSPAPAYK--PAPSYSP-APSYSP 85 Query: 404 STGYSPSQPGYSPSSTSQYTP 342 + Y P+ P Y P+ + + +P Sbjct: 86 APAYKPA-PAYKPAPSYKPSP 105 Score = 58.2 bits (139), Expect = 5e-07 Identities = 36/77 (46%), Positives = 54/77 (70%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPSTGY 393 PS P SP+SPS +P++PS +P++PSYSP +P+YSP+ Y+ +P YSP +P + P+ Y Sbjct: 25 PSYP-SPSSPS-APSAPS-APSAPSYSP-APSYSPAPLYS--PAPSYSP-APAYKPAPSY 77 Query: 392 SPSQPGYSPSSTSQYTP 342 SP+ P YSP+ + P Sbjct: 78 SPA-PSYSPAPAYKPAP 93 Score = 55.8 bits (133), Expect = 2e-06 Identities = 35/75 (46%), Positives = 49/75 (65%) Frame = -2 Query: 578 FSPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQFSPST 399 +SP+ YSP +P YSP +PSYSP +P+Y P +P+YSP+ Y+ +P Y P +P + P+ Sbjct: 47 YSPAPSYSP-APLYSP-APSYSP-APAYKP-APSYSPAPSYS--PAPAYKP-APAYKPAP 99 Query: 398 GYSPSQPGYSPSSTS 354 Y PS P YS S S Sbjct: 100 SYKPS-PSYSAPSYS 113 [248][TOP] >UniRef100_O04142 DNA-directed RNA polymerase (Fragment) n=1 Tax=Porphyra yezoensis RepID=O04142_PORYE Length = 1685 Score = 64.7 bits (156), Expect = 5e-09 Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 23/105 (21%) Frame = -2 Query: 581 RFSPSSP-YSPTSP---------------SYSPTSPSYSPTSPS--YSPSSPTYSPSSPY 456 R SP+SP Y+ SP +Y+P SP+Y TSP YSPS+P + SSP Sbjct: 1548 RMSPASPGYAAMSPRFGGGLCGGPAGGAGAYAPASPAYMATSPGMGYSPSTPALAVSSP- 1606 Query: 455 NSGTSPDYSPSSPQFS----PSTGY-SPSQPGYSPSSTSQYTPKT 336 G SP YSP+SP P+ GY SP PGY P+S + P T Sbjct: 1607 --GYSPGYSPTSPSVGARGGPAAGYASPQSPGYVPTSPAYARPGT 1649 Score = 61.2 bits (147), Expect = 6e-08 Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 21/94 (22%) Frame = -2 Query: 578 FSPSSP-YSPTSPS--YSPTSPSYSPTSPSYSPSSPTYSPSSP-----------YNSGTS 441 ++P+SP Y TSP YSP++P+ + +SP YSP YSP+SP Y S S Sbjct: 1578 YAPASPAYMATSPGMGYSPSTPALAVSSPGYSPG---YSPTSPSVGARGGPAAGYASPQS 1634 Query: 440 PDYSPSSPQFS-PST------GYSPSQPGYSPSS 360 P Y P+SP ++ P T YSPS P YSPSS Sbjct: 1635 PGYVPTSPAYARPGTVVAAANVYSPSSPAYSPSS 1668 Score = 61.2 bits (147), Expect = 6e-08 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 18/96 (18%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYS----PSSPYNSGTSPDYSPSSPQF- 411 SP YSP++P+ + +SP YSP YSP+SP+ P++ Y S SP Y P+SP + Sbjct: 1589 SPGMGYSPSTPALAVSSPGYSP---GYSPTSPSVGARGGPAAGYASPQSPGYVPTSPAYA 1645 Query: 410 ------------SPST-GYSPSQPGYSPSSTSQYTP 342 SPS+ YSPS P Y+ +S+ Y P Sbjct: 1646 RPGTVVAAANVYSPSSPAYSPSSPNYAAASSPAYQP 1681 [249][TOP] >UniRef100_C4XYJ5 Predicted protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4XYJ5_CLAL4 Length = 953 Score = 64.7 bits (156), Expect = 5e-09 Identities = 49/95 (51%), Positives = 55/95 (57%), Gaps = 7/95 (7%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSP--SYSPSSPTYSPSSPYNSGT-----SPDYSPSSP 417 SP SP SP+SPS SP SPS SP+SP S SP SP SP SP SG+ SP SPSSP Sbjct: 703 SPGSPGSPSSPSGSPGSPS-SPSSPGASGSPGSPG-SPGSPGASGSPGSPGSPG-SPSSP 759 Query: 416 QFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 SP + SPS PG S S S +P + PG Sbjct: 760 SGSPGSPSSPSSPGASGSPGSPGSPGSPGASGAPG 794 Score = 58.9 bits (141), Expect = 3e-07 Identities = 49/113 (43%), Positives = 56/113 (49%), Gaps = 24/113 (21%) Frame = -2 Query: 575 SPSSPYSPTSP--SYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGT------------ 444 SP SP SP SP S SP SP SP+SPS SP SP+ SPSSP SG+ Sbjct: 639 SPGSPGSPGSPGASGSPGSPGSPGSPSSPSGSPGSPS-SPSSPGASGSPGSPGSPGSPGA 697 Query: 443 --------SPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309 SP SPSSP SP + SPS PG S S S +P + PG+ Sbjct: 698 SGSPGSPGSPG-SPSSPSGSPGSPSSPSSPGASGSPGSPGSPGSPGASGSPGS 749 Score = 58.2 bits (139), Expect = 5e-07 Identities = 50/94 (53%), Positives = 56/94 (59%), Gaps = 6/94 (6%) Frame = -2 Query: 575 SPSSPYSPTSP--SYSPTSPSY--SPTSPSYSPSSPTYSPSSPYNSGT--SPDYSPSSPQ 414 SP SP SP SP S SP SP SP+SPS SP SP+ SPSSP SG+ SP SP SP Sbjct: 685 SPGSPGSPGSPGASGSPGSPGSPGSPSSPSGSPGSPS-SPSSPGASGSPGSPG-SPGSPG 742 Query: 413 FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPG 312 S S G SP PG SPSS S +P + + PG Sbjct: 743 ASGSPG-SPGSPG-SPSSPSG-SPGSPSSPSSPG 773 Score = 57.4 bits (137), Expect = 8e-07 Identities = 47/95 (49%), Positives = 53/95 (55%), Gaps = 7/95 (7%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPSSPQF 411 SP SP SP+SPS SP SP S SP SP SP SP SPSSP +S + SP SP Sbjct: 521 SPGSPGSPSSPSGSPGSPGSPGASGSPGSPG-SPGSPG-SPSSPGSSESGSPGSPGSPGA 578 Query: 410 SPSTGY--SPSQPGYSPSSTSQYTPKTNDNKDDPG 312 S S G SP PG SPSS S +P + + PG Sbjct: 579 SGSPGSPGSPGSPG-SPSSPSG-SPGSPSSPGSPG 611 Score = 56.2 bits (134), Expect = 2e-06 Identities = 41/91 (45%), Positives = 49/91 (53%), Gaps = 2/91 (2%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPSSP--TYSPSSPYNSGTSPDYSPSSPQFSPS 402 SP SP SP SP SP+SP S + SP SP + SP SP + G SP SPSSP SP Sbjct: 546 SPGSPGSPGSPG-SPSSPGSSESGSPGSPGSPGASGSPGSPGSPG-SPG-SPSSPSGSPG 602 Query: 401 TGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309 + SP PG S S S +P + PG+ Sbjct: 603 SPSSPGSPGASGSPGSPGSPGSPGASGAPGS 633 Score = 55.5 bits (132), Expect = 3e-06 Identities = 49/119 (41%), Positives = 55/119 (46%), Gaps = 30/119 (25%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSP--SYSPSSP-----------------------TYS 471 SP SP SP+SPS SP SPS SP SP S SP SP S Sbjct: 587 SPGSPGSPSSPSGSPGSPS-SPGSPGASGSPGSPGSPGSPGASGAPGSPGSPGSPGSPGS 645 Query: 470 PSSPYNSGT-----SPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309 P SP SG+ SP SPSSP SP + SPS PG S S S +P + PG+ Sbjct: 646 PGSPGASGSPGSPGSPG-SPSSPSGSPGSPSSPSSPGASGSPGSPGSPGSPGASGSPGS 703 Score = 55.1 bits (131), Expect = 4e-06 Identities = 46/95 (48%), Positives = 52/95 (54%), Gaps = 6/95 (6%) Frame = -2 Query: 575 SPSSPYSPTSP--SYSPTSPSYSPTSP--SYSPSSP--TYSPSSPYNSGTSPDYSPSSPQ 414 SP SP SP+SP S SP SP SP SP S SP SP SPSSP S SP SPSSP Sbjct: 716 SPGSPSSPSSPGASGSPGSPG-SPGSPGASGSPGSPGSPGSPSSPSGSPGSPS-SPSSPG 773 Query: 413 FSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309 S S G SP PG +S + P + + PG+ Sbjct: 774 ASGSPG-SPGSPGSPGASGAPGAPGSPGSPGSPGS 807 Score = 54.7 bits (130), Expect = 5e-06 Identities = 45/111 (40%), Positives = 56/111 (50%), Gaps = 22/111 (19%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSP--SYSPSSPTY--------------------SPSS 462 SP SP SP+SPS SP SPS SP+SP S SP SP SP S Sbjct: 749 SPGSPGSPSSPSGSPGSPS-SPSSPGASGSPGSPGSPGSPGASGAPGAPGSPGSPGSPGS 807 Query: 461 PYNSGTSPDYSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPKTNDNKDDPGT 309 P + G+S SPSSP S S SPS SPS++ +P ++ + PG+ Sbjct: 808 PSSPGSSESGSPSSP--SASESGSPS----SPSASESGSPGSSGSPGSPGS 852 [250][TOP] >UniRef100_A9S7U4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S7U4_PHYPA Length = 296 Score = 64.3 bits (155), Expect = 7e-09 Identities = 41/82 (50%), Positives = 44/82 (53%), Gaps = 5/82 (6%) Frame = -2 Query: 572 PSSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGTSPDYSPS----SPQFSP 405 PS P P SP Y SP Y+ SP Y SP YSPS Y S SP YSPS SP +SP Sbjct: 215 PSCPPPPESPVYE--SPPYASPSPVYE--SPPYSPSPVYESPPSPTYSPSPVYKSPTYSP 270 Query: 404 STGY-SPSQPGYSPSSTSQYTP 342 S Y SP P YSPS + P Sbjct: 271 SPVYKSPPSPSYSPSPVYKSPP 292 Score = 59.3 bits (142), Expect = 2e-07 Identities = 35/64 (54%), Positives = 37/64 (57%), Gaps = 4/64 (6%) Frame = -2 Query: 575 SPSSPYSPTSPSYSPTSPSYSPTSPSYSPS----SPTYSPSSPYNSGTSPDYSPSSPQFS 408 SPS Y SP YSP+ SP SP+YSPS SPTYSPS Y S SP YSPS S Sbjct: 233 SPSPVYE--SPPYSPSPVYESPPSPTYSPSPVYKSPTYSPSPVYKSPPSPSYSPSPVYKS 290 Query: 407 PSTG 396 P G Sbjct: 291 PPAG 294 Score = 58.2 bits (139), Expect = 5e-07 Identities = 38/71 (53%), Positives = 41/71 (57%), Gaps = 5/71 (7%) Frame = -2 Query: 569 SSPYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGT---SPDY-SPSSPQFSPS 402 S PY+ SP Y SP YSP+ SP SPTYSPS Y S T SP Y SP SP +SPS Sbjct: 228 SPPYASPSPVYE--SPPYSPSPVYESPPSPTYSPSPVYKSPTYSPSPVYKSPPSPSYSPS 285 Query: 401 TGY-SPSQPGY 372 Y SP GY Sbjct: 286 PVYKSPPAGGY 296