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[1][TOP]
>UniRef100_UPI00017E10C5 RNA polymerase beta'''' subunit n=1 Tax=Medicago truncatula
RepID=UPI00017E10C5
Length = 1374
Score = 292 bits (748), Expect = 1e-77
Identities = 151/192 (78%), Positives = 159/192 (82%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CTDHSH MYPAIFHDTF LAKRRRNRFLIPF QSIQERKNELM P+GVS+EIPINGIF
Sbjct: 552 CTDHSHLMYPAIFHDTFYLLAKRRRNRFLIPF--QSIQERKNELMRPFGVSIEIPINGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
H NSIFAYFDDPQYRRQ+SGITKYRT +GIHS+F+KED
Sbjct: 610 HRNSIFAYFDDPQYRRQNSGITKYRT---VGIHSVFQKED-------------------- 646
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
FIEYRGIKEL PKYQIKVD+ FFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV
Sbjct: 647 -FIEYRGIKELKPKYQIKVDRFFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 705
Query: 44 GGLLRLEKKKKK 9
GGL+RLEKKKKK
Sbjct: 706 GGLVRLEKKKKK 717
[2][TOP]
>UniRef100_P12227 DNA-directed RNA polymerase subunit beta'' (Fragment) n=1 Tax=Pisum
sativum RepID=RPOC2_PEA
Length = 1163
Score = 279 bits (713), Expect = 1e-73
Identities = 147/192 (76%), Positives = 155/192 (80%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CTDHS YPAIFHDTF FLAKRRRNRFLIPF FQSIQERKNE M P GVS+EIPINGIF
Sbjct: 344 CTDHS---YPAIFHDTFYFLAKRRRNRFLIPFPFQSIQERKNERMSPSGVSIEIPINGIF 400
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
H NSIFAYFDDPQYRR SSGITKYRT IGIHS IF+KE
Sbjct: 401 HRNSIFAYFDDPQYRRHSSGITKYRT---IGIHS---------------------IFQKE 436
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
DFIEYRGIKEL PK QI+VD+ FFIPEEVHILP+SSS+MVRNNSLVGIGTPITFNIRSRV
Sbjct: 437 DFIEYRGIKELKPKSQIQVDRFFFIPEEVHILPKSSSLMVRNNSLVGIGTPITFNIRSRV 496
Query: 44 GGLLRLEKKKKK 9
GGL+RL+KKKKK
Sbjct: 497 GGLVRLDKKKKK 508
[3][TOP]
>UniRef100_B5LMM6 DNA-directed RNA polymerase n=1 Tax=Cicer arietinum
RepID=B5LMM6_CICAR
Length = 1376
Score = 261 bits (668), Expect = 2e-68
Identities = 138/192 (71%), Positives = 151/192 (78%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CTD+SH MY AIF++ F LAKRRRNRF+IPF Q IQE+KN+LM P GVS+EIPINGIF
Sbjct: 549 CTDYSHLMYSAIFNNIFYLLAKRRRNRFVIPF--QWIQEQKNKLMSPSGVSIEIPINGIF 606
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
H NSI AYFDDPQYRRQ+SGITKYRT IGIHS+F+KED
Sbjct: 607 HRNSILAYFDDPQYRRQNSGITKYRT---IGIHSLFQKED-------------------- 643
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRGIKEL PKYQ KVD+ FFIPEEVHILPESSSIM+RNNSLVGIGTPIT NIRSRV
Sbjct: 644 -LIEYRGIKELKPKYQNKVDRFFFIPEEVHILPESSSIMIRNNSLVGIGTPITLNIRSRV 702
Query: 44 GGLLRLEKKKKK 9
GGL+RLEKKKKK
Sbjct: 703 GGLVRLEKKKKK 714
[4][TOP]
>UniRef100_B8R492 DNA-directed RNA polymerase n=1 Tax=Trifolium subterraneum
RepID=B8R492_TRISU
Length = 1349
Score = 252 bits (643), Expect = 2e-65
Identities = 138/192 (71%), Positives = 140/192 (72%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CTD SHFM PAIFHDTFN LAKRRRNRFLIPF FQSIQERKNELMPP GVSVEIPIN IF
Sbjct: 548 CTDRSHFMDPAIFHDTFNLLAKRRRNRFLIPFPFQSIQERKNELMPPSGVSVEIPINAIF 607
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
HSNSIFAYFDDPQYRRQSSGITKY IGI DS+FE
Sbjct: 608 HSNSIFAYFDDPQYRRQSSGITKYGGIIGI---------DSVFE---------------- 642
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
KVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPIT NIRSRV
Sbjct: 643 -----------------KVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITCNIRSRV 685
Query: 44 GGLLRLEKKKKK 9
GGL+RLEKKKKK
Sbjct: 686 GGLVRLEKKKKK 697
[5][TOP]
>UniRef100_A1XK46 RNA polymerase beta chain (Fragment) n=1 Tax=Cercis canadensis
RepID=A1XK46_CERCN
Length = 864
Score = 240 bits (613), Expect = 5e-62
Identities = 123/192 (64%), Positives = 144/192 (75%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C +F+Y AI HD + LAKRRRNRF+IPF QSI ER+ EL+PP G+S+EIPINGIF
Sbjct: 101 CMGRCNFIYAAILHDNSDLLAKRRRNRFIIPF--QSIPEREKELIPPSGISIEIPINGIF 158
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDPQYR++SSGITKYRT IG+HSI + ED
Sbjct: 159 RRNSILAYFDDPQYRKKSSGITKYRT---IGVHSIVKNED-------------------- 195
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ+KVD+ FFIPEEVHILPESSSIMVRNNS++G+ TPITFNIRSRV
Sbjct: 196 -LIEYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTPITFNIRSRV 254
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKK+
Sbjct: 255 GGLVRVEKKKKR 266
[6][TOP]
>UniRef100_Q9BBS7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lotus japonicus
RepID=RPOC2_LOTJA
Length = 1332
Score = 239 bits (611), Expect = 9e-62
Identities = 124/192 (64%), Positives = 142/192 (73%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C DH HFM+P I DT N LAK+RRNRF+IPF F+SI+ER NELMP +SVEIPI+GI
Sbjct: 523 CPDHCHFMHPTISPDTSNLLAKKRRNRFIIPFLFRSIRERNNELMPD--ISVEIPIDGII 580
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
H NSI AYFDDPQYR QSSGI KY+T IGIHSIF+KED
Sbjct: 581 HKNSILAYFDDPQYRTQSSGIAKYKT---IGIHSIFQKED-------------------- 617
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRGI+E PKYQIKVD+ FFIP+EVHIL ESSSIMVRNNS++G+ TPIT N +SRV
Sbjct: 618 -LIEYRGIREFKPKYQIKVDRFFFIPQEVHILSESSSIMVRNNSIIGVNTPITLNKKSRV 676
Query: 44 GGLLRLEKKKKK 9
GGL+R+EK KKK
Sbjct: 677 GGLVRVEKNKKK 688
[7][TOP]
>UniRef100_Q8HVY3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Glycine max
RepID=RPOC2_SOYBN
Length = 1386
Score = 239 bits (610), Expect = 1e-61
Identities = 127/190 (66%), Positives = 140/190 (73%)
Frame = -1
Query: 578 DHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHS 399
DH HF +P IFHDT + LAKRRRNR +IPF FQSIQER ELM +S+EIPINGIF
Sbjct: 550 DHCHFTHPTIFHDTTDLLAKRRRNRLIIPFQFQSIQERDKELMLASSISIEIPINGIFRR 609
Query: 398 NSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDF 219
NSI AYFDDPQYR QSSGITKYRT IGI+SIF+KED +
Sbjct: 610 NSILAYFDDPQYRTQSSGITKYRT---IGINSIFKKEDFL-------------------- 646
Query: 218 IEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGG 39
IEY+G+KE KYQIKVDQ FFIPEEVHILPESSSIMVRNNS+V + T IT NIRSRV G
Sbjct: 647 IEYQGVKEFKTKYQIKVDQFFFIPEEVHILPESSSIMVRNNSIVEVDTLITLNIRSRVRG 706
Query: 38 LLRLEKKKKK 9
L+RLEKKKKK
Sbjct: 707 LVRLEKKKKK 716
[8][TOP]
>UniRef100_A9XW87 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixerba brexioides
RepID=A9XW87_IXEBR
Length = 1283
Score = 238 bits (607), Expect = 3e-61
Identities = 122/190 (64%), Positives = 141/190 (74%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H HF+YPAI H+ F+ LAKRRRNRFLIPF QSIQE++ EL+P G+S+EIPINGIF
Sbjct: 519 CTGHCHFIYPAILHENFDLLAKRRRNRFLIPF--QSIQEQEKELLPHSGISIEIPINGIF 576
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDPQYRR SSGITKY T +G+HSI +KE KE
Sbjct: 577 RRNSILAYFDDPQYRRNSSGITKYGT---LGVHSIIKKE-------------------KE 614
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEYRG+KE PK Q+KVD FFIPEEVHILPESSSIMVRNNS++G+ T IT N RSR
Sbjct: 615 DLIEYRGVKEFKPKCQMKVDLFFFIPEEVHILPESSSIMVRNNSIIGVDTRITLNTRSRA 674
Query: 44 GGLLRLEKKK 15
GGL+R+E+KK
Sbjct: 675 GGLVRVERKK 684
[9][TOP]
>UniRef100_A9XWB8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Strasburgeria robusta
RepID=A9XWB8_9ROSI
Length = 1281
Score = 236 bits (603), Expect = 7e-61
Identities = 121/190 (63%), Positives = 141/190 (74%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H HF+YPAI H+ F+ LAKRRRNRF+IPF QSIQE++ EL+P G+S+EIPINGIF
Sbjct: 518 CTAHCHFIYPAILHENFDLLAKRRRNRFIIPF--QSIQEQEKELLPHSGISIEIPINGIF 575
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDPQYRR SSGITKY T +G+HSI +KE KE
Sbjct: 576 RRNSILAYFDDPQYRRNSSGITKYGT---LGVHSIIKKE-------------------KE 613
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEYRG+KE PK Q KVD+ FFIPEEVHILPESSSIMVRNNS++G+ T IT N RSR
Sbjct: 614 DLIEYRGVKEFKPKCQTKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTRITLNTRSRS 673
Query: 44 GGLLRLEKKK 15
GGL+R+E+KK
Sbjct: 674 GGLVRVERKK 683
[10][TOP]
>UniRef100_A9XW42 DNA-directed RNA polymerase (Fragment) n=1 Tax=Albizia julibrissin
RepID=A9XW42_ALBJU
Length = 1321
Score = 236 bits (603), Expect = 7e-61
Identities = 123/193 (63%), Positives = 145/193 (75%), Gaps = 1/193 (0%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNEL-MPPYGVSVEIPINGI 408
C H + +YPAI H+ + LAKRRRNR +IPF QSIQER EL MPP G+S+EIP+NGI
Sbjct: 520 CMGHFNLIYPAILHENSDLLAKRRRNRLIIPF--QSIQERDKELLMPPSGISIEIPLNGI 577
Query: 407 FHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEK 228
F NSI AYFDDPQYR++SSGITKYRT IG+HSIF+KED
Sbjct: 578 FCRNSILAYFDDPQYRKKSSGITKYRT---IGVHSIFKKED------------------- 615
Query: 227 EDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSR 48
IEYRG+KEL PKYQ+K+D+ FFIPEEVHILPESSSIMVRNNS++G+ TPIT NIRSR
Sbjct: 616 --LIEYRGVKELKPKYQMKMDRFFFIPEEVHILPESSSIMVRNNSIIGVDTPITVNIRSR 673
Query: 47 VGGLLRLEKKKKK 9
VGGL+ +EKKKK+
Sbjct: 674 VGGLVXVEKKKKR 686
[11][TOP]
>UniRef100_A4GGA7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Phaseolus vulgaris
RepID=RPOC2_PHAVU
Length = 1366
Score = 234 bits (597), Expect = 4e-60
Identities = 123/192 (64%), Positives = 139/192 (72%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C DH HF +PAIFHDT + LAKRRRNRF+IPF FQSIQER LM +S+EIPING+F
Sbjct: 548 CIDHCHFTHPAIFHDTTDLLAKRRRNRFIIPFQFQSIQERDKALMLASSISIEIPINGLF 607
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSIFAYFDDPQYR QSSGITKYRT I I+ I +KED +
Sbjct: 608 RRNSIFAYFDDPQYRTQSSGITKYRT---IDINYILKKEDFV------------------ 646
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEY G+KE KYQ+KVDQ FFIPEEV+ILPE SSIMVRNNS+V + TPIT NIRS+V
Sbjct: 647 --IEYPGVKEFKTKYQMKVDQFFFIPEEVYILPEFSSIMVRNNSIVEVDTPITVNIRSQV 704
Query: 44 GGLLRLEKKKKK 9
GL+RLEKKKKK
Sbjct: 705 SGLVRLEKKKKK 716
[12][TOP]
>UniRef100_A9XWB0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Quillaja saponaria
RepID=A9XWB0_9FABA
Length = 1313
Score = 232 bits (591), Expect = 2e-59
Identities = 120/192 (62%), Positives = 141/192 (73%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C HS+F+Y AI H+ + LAKRRRNRF+IPF QSIQER E MP G+S+EIPI+GIF
Sbjct: 516 CAGHSNFLYSAILHENSDLLAKRRRNRFIIPF--QSIQERDKEQMPRSGISIEIPIDGIF 573
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDPQYR++SSGITKYRT IG+HSI +KED
Sbjct: 574 RINSILAYFDDPQYRKKSSGITKYRT---IGVHSILKKED-------------------- 610
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ+KVDQ FFIPEEVHILPESS IMVRNNS++G+ T IT NIRS+V
Sbjct: 611 -LIEYRGVKEFKPKYQMKVDQFFFIPEEVHILPESSFIMVRNNSIIGVDTSITLNIRSQV 669
Query: 44 GGLLRLEKKKKK 9
GL+R+EKKKK+
Sbjct: 670 AGLVRVEKKKKR 681
[13][TOP]
>UniRef100_A9XW89 DNA-directed RNA polymerase (Fragment) n=1 Tax=Juglans nigra
RepID=A9XW89_JUGNI
Length = 1268
Score = 231 bits (588), Expect = 4e-59
Identities = 115/192 (59%), Positives = 143/192 (74%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YPAI + ++ LAKR++N F+IPF QSIQER+ ELMPP G+S+EIP+NGIF
Sbjct: 518 CTGHFNLIYPAILYKNYDLLAKRQKNXFIIPF--QSIQEREKELMPPSGISIEIPVNGIF 575
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDPQYR+++SGITKY T IG+HSI +KED
Sbjct: 576 RKNSILAYFDDPQYRKKNSGITKYGT---IGVHSILKKED-------------------- 612
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ+K+D+ FFIPEEVHILPESSSIMV+NNSL+G+ T IT NIRSR
Sbjct: 613 -LIEYRGVKEFKPKYQMKIDRFFFIPEEVHILPESSSIMVQNNSLIGVDTRITLNIRSRA 671
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 672 GGLVRVERKKKR 683
[14][TOP]
>UniRef100_A9XW69 DNA-directed RNA polymerase (Fragment) n=1 Tax=Datisca cannabina
RepID=A9XW69_9ROSI
Length = 1280
Score = 231 bits (588), Expect = 4e-59
Identities = 120/192 (62%), Positives = 141/192 (73%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YPAIF + LAKRRRNRFLI F+S+QER+ EL+P G+S+EIPINGIF
Sbjct: 521 CTGHCNLLYPAIFKGNSDLLAKRRRNRFLI--QFESLQEREKELLPRSGISIEIPINGIF 578
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDPQYRR SSGITKY T IG+HSI +KED
Sbjct: 579 RRNSILAYFDDPQYRRNSSGITKYGT---IGVHSILKKED-------------------- 615
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KEL PKYQ+KVD+ FFIPEEVHILPESSSIMVRNNS++G+ T IT + RSRV
Sbjct: 616 -LIEYRGVKELKPKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTRITLSTRSRV 674
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKK+
Sbjct: 675 GGLVRVEKKKKR 686
[15][TOP]
>UniRef100_A9XWB9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stylobasium
spathulatum RepID=A9XWB9_9FABA
Length = 1266
Score = 230 bits (586), Expect = 7e-59
Identities = 123/194 (63%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H HF+YP I H+ + LAKRRRNRF+IPF QSIQE+ ELMP G+S+EIPINGIF
Sbjct: 518 CLGHCHFIYPDILHENSDLLAKRRRNRFIIPF--QSIQEQDKELMPGSGISMEIPINGIF 575
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDPQYR++S GITKY T IG H SI +KE
Sbjct: 576 RRNSILAYFDDPQYRKKSLGITKYST---IGAH---------------------SILKKE 611
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPE--SSSIMVRNNSLVGIGTPITFNIRS 51
D IEYRG+KE KYQ+KVDQ FFIPEEVHILPE SSSIMVRNNSL+G+ TPIT NIRS
Sbjct: 612 DLIEYRGVKEFKLKYQMKVDQFFFIPEEVHILPESSSSSIMVRNNSLIGVDTPITLNIRS 671
Query: 50 RVGGLLRLEKKKKK 9
RVGGL+R+EKKKK+
Sbjct: 672 RVGGLVRVEKKKKR 685
[16][TOP]
>UniRef100_A9XW46 DNA-directed RNA polymerase (Fragment) n=1 Tax=Aphloia theiformis
RepID=A9XW46_9ROSI
Length = 1273
Score = 229 bits (584), Expect = 1e-58
Identities = 122/193 (63%), Positives = 142/193 (73%), Gaps = 2/193 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT HS+F+YPAI HD + LAKRRRNRFLIPF QSIQE++ ELMP G+S++IPIN IF
Sbjct: 517 CTGHSNFIYPAILHDNLDLLAKRRRNRFLIPF--QSIQEQEKELMPHSGISIKIPINAIF 574
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDPQYRR+SSGITKY T IG+H +KE KE
Sbjct: 575 LKNSILAYFDDPQYRRKSSGITKYGT---IGVHPTVKKE-------------------KE 612
Query: 224 DFIEYRGIKELNPK--YQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
D IEYRGIKE PK Q+KVD++FFIPEEVHILPESSSIMVRNNS+VG+ T IT N RS
Sbjct: 613 DLIEYRGIKEFKPKCQMQMKVDRLFFIPEEVHILPESSSIMVRNNSIVGVDTQITLNTRS 672
Query: 50 RVGGLLRLEKKKK 12
R GGL+R+E+KK+
Sbjct: 673 RAGGLVRVERKKR 685
[17][TOP]
>UniRef100_A9XW78 DNA-directed RNA polymerase n=1 Tax=Gunnera manicata
RepID=A9XW78_9MAGN
Length = 1386
Score = 228 bits (582), Expect = 2e-58
Identities = 120/191 (62%), Positives = 138/191 (72%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H +F+YPAI H+ F LAKRRRNRF+IPF QSIQER+ ELMP G+S+EIPINGIF
Sbjct: 552 CTGHCNFIYPAILHENFYLLAKRRRNRFIIPF--QSIQEREKELMPRSGISIEIPINGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDD +YRR SGITKY T I +HSI +KED
Sbjct: 610 RRNSILAYFDDFRYRRTGSGITKYGT---IEMHSIIKKED-------------------- 646
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQIKVD+ FFIPEEVHILP SS +MVRNNS++G+ T ITFN RSRV
Sbjct: 647 -LIEYRGVKEFRPKYQIKVDRFFFIPEEVHILPGSSYVMVRNNSIIGVDTQITFNTRSRV 705
Query: 44 GGLLRLEKKKK 12
GGL+R+EKKKK
Sbjct: 706 GGLVRVEKKKK 716
[18][TOP]
>UniRef100_A9XW88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixonanthes icosandra x
Ixonanthes cuneata RepID=A9XW88_9ROSI
Length = 1262
Score = 228 bits (581), Expect = 3e-58
Identities = 118/192 (61%), Positives = 140/192 (72%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YPAI H+ + LAKRRRNRF+IPF QSIQE++ ELMP +S+EIPINGIF
Sbjct: 519 CTGHCNLIYPAILHENSDLLAKRRRNRFIIPF--QSIQEQEKELMPCSDISLEIPINGIF 576
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
H NSIFAYF DPQYRR SSGITKY IG+HSI +KED
Sbjct: 577 HRNSIFAYFGDPQYRRNSSGITKYGA---IGVHSIVKKED-------------------- 613
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ+KVD+ FFIPEEV+ILPE SS+MVRNNS++G+ T IT N RSRV
Sbjct: 614 -LIEYRGVKEFKPKYQMKVDRFFFIPEEVYILPEFSSLMVRNNSIIGVDTQITLNTRSRV 672
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKKK
Sbjct: 673 GGLVRVERKKKK 684
[19][TOP]
>UniRef100_A9XW96 DNA-directed RNA polymerase (Fragment) n=1 Tax=Melianthus comosus
RepID=A9XW96_9ROSI
Length = 1267
Score = 227 bits (579), Expect = 5e-58
Identities = 113/192 (58%), Positives = 137/192 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CTDH + +YP I H+ F +AKRRRNRF++PF QER+ EL+P +S+EIPINGIF
Sbjct: 508 CTDHLNLIYPVILHENFYLVAKRRRNRFIVPFQSIQEQEREKELLPRSDISIEIPINGIF 567
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR SSGITKY T +G+HSI +KED
Sbjct: 568 RRNSILAYFDDPRYRRNSSGITKYGT---LGVHSIIKKED-------------------- 604
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRGIKE PKYQ+KVD+ FFIPEEVHILPESSSIM+RNNSL+G+ T +T N RSRV
Sbjct: 605 -LIEYRGIKEFKPKYQMKVDRFFFIPEEVHILPESSSIMIRNNSLIGVDTQLTLNTRSRV 663
Query: 44 GGLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 664 SGLVRMERKKKR 675
[20][TOP]
>UniRef100_A9XW66 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crossosoma
californicum RepID=A9XW66_CROCA
Length = 1266
Score = 227 bits (578), Expect = 6e-58
Identities = 118/192 (61%), Positives = 139/192 (72%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YPAI H+ + LAKRRRNR +IPF QS+QE++N LM G+S+EIPINGIF
Sbjct: 503 CIGHCNFIYPAILHENSDLLAKRRRNRLIIPF--QSVQEQENGLMSHSGISIEIPINGIF 560
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+Y R SSGITKY T IG HSI +KED
Sbjct: 561 RRNSILAYFDDPRYTRNSSGITKYGT---IGAHSIVKKED-------------------- 597
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE NPKYQ+KVD+ FFIPEEVHILPESSSIMVRNNS++G+ T IT N RSRV
Sbjct: 598 -LIEYRGVKEFNPKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTRITLNTRSRV 656
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKKK
Sbjct: 657 GGLVRVERKKKK 668
[21][TOP]
>UniRef100_A9XW43 DNA-directed RNA polymerase (Fragment) n=1 Tax=Alnus viridis subsp.
sinuata RepID=A9XW43_ALNVI
Length = 1273
Score = 226 bits (576), Expect = 1e-57
Identities = 114/186 (61%), Positives = 140/186 (75%)
Frame = -1
Query: 569 HFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSNSI 390
+ +YPAI ++ + LAKRRRNRF+IPF QSIQER+ ELMPP G+S+EIP+NGIF NSI
Sbjct: 521 NLIYPAILYENSDLLAKRRRNRFIIPF--QSIQEREKELMPPSGISIEIPVNGIFRKNSI 578
Query: 389 FAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFIEY 210
AYFDDPQYRR++SGITKY T IG+HSI +KED IEY
Sbjct: 579 LAYFDDPQYRRKNSGITKYGT---IGVHSILKKED---------------------LIEY 614
Query: 209 RGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLLR 30
RG+KE+ PKYQ+K+D+ FFIPEEVHILPESSSIMV+NNS++G+ T IT N RSR GGL+R
Sbjct: 615 RGVKEIKPKYQMKIDRFFFIPEEVHILPESSSIMVQNNSIIGVDTRITLNTRSRAGGLVR 674
Query: 29 LEKKKK 12
+E+KKK
Sbjct: 675 VERKKK 680
[22][TOP]
>UniRef100_A9XWB6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stachyurus praecox
RepID=A9XWB6_9ROSI
Length = 1280
Score = 225 bits (573), Expect = 2e-57
Identities = 117/192 (60%), Positives = 138/192 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YPAI H+ + LAKRRRNR +IPF QSIQE++ ELM G+S+EIPINGIF
Sbjct: 521 CIGHCNFIYPAILHENSDLLAKRRRNRLIIPF--QSIQEQEKELMSHSGISIEIPINGIF 578
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+Y R SSGITKY T IG+HSI +KED
Sbjct: 579 RRNSILAYFDDPRYTRNSSGITKYGT---IGVHSIVKKED-------------------- 615
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ+KVD+ FFIPEEVHILPESSSIMVRNNS++G+ T I N RSRV
Sbjct: 616 -LIEYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTRIALNTRSRV 674
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKKK
Sbjct: 675 GGLVRVERKKKK 686
[23][TOP]
>UniRef100_A9XW65 DNA-directed RNA polymerase n=1 Tax=Cornus florida RepID=A9XW65_CORFO
Length = 1391
Score = 225 bits (573), Expect = 2e-57
Identities = 116/192 (60%), Positives = 137/192 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + YPAIFH+ + LAKRRRNRF+IP QSIQERK + +P G+S+EIPINGIF
Sbjct: 552 CTGHCNLTYPAIFHENSDLLAKRRRNRFIIPL--QSIQERKKKRIPRSGISIEIPINGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+SSGITKY T + SI +KE
Sbjct: 610 RRNSILAYFDDPRYRRKSSGITKYGTI------------------------EAHSIVKKE 645
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNSL+G+ T I FN RSRV
Sbjct: 646 DLIEYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSLIGVDTQIAFNTRSRV 705
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 706 GGLVRVERKKKR 717
[24][TOP]
>UniRef100_A1XK47 RNA polymerase beta chain (Fragment) n=1 Tax=Cornus florida
RepID=A1XK47_CORFO
Length = 812
Score = 225 bits (573), Expect = 2e-57
Identities = 116/192 (60%), Positives = 137/192 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + YPAIFH+ + LAKRRRNRF+IP QSIQERK + +P G+S+EIPINGIF
Sbjct: 49 CTGHCNLTYPAIFHENSDLLAKRRRNRFIIPL--QSIQERKKKRIPRSGISIEIPINGIF 106
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+SSGITKY T + SI +KE
Sbjct: 107 RRNSILAYFDDPRYRRKSSGITKYGTI------------------------EAHSIVKKE 142
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNSL+G+ T I FN RSRV
Sbjct: 143 DLIEYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSLIGVDTQIAFNTRSRV 202
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 203 GGLVRVERKKKR 214
[25][TOP]
>UniRef100_A9XWB7 DNA-directed RNA polymerase n=1 Tax=Staphylea colchica
RepID=A9XWB7_9ROSI
Length = 1390
Score = 224 bits (572), Expect = 3e-57
Identities = 116/192 (60%), Positives = 139/192 (72%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YPAI H+ + LAKRRRNR +IPF QSIQE++ EL+ G+S+EIPINGIF
Sbjct: 552 CIGHCNFIYPAILHENSDLLAKRRRNRLIIPF--QSIQEQEKELLSHSGISIEIPINGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR SSGITKY T IG+HSI +KED
Sbjct: 610 RRNSILAYFDDPRYRRNSSGITKYGT---IGVHSIVKKED-------------------- 646
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKY++KVD+ FFIPEEVHILPESSSIMVRNNS++G+ T I N RSRV
Sbjct: 647 -LIEYRGVKEFKPKYKMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTRIALNTRSRV 705
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKKK
Sbjct: 706 GGLVRVERKKKK 717
[26][TOP]
>UniRef100_A9XW92 DNA-directed RNA polymerase (Fragment) n=1 Tax=Leonia glycycarpa
RepID=A9XW92_9ROSI
Length = 1274
Score = 224 bits (572), Expect = 3e-57
Identities = 116/192 (60%), Positives = 138/192 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YPAI H F+ LAK+RRNRF++PF Q I ER+NELMP +S+EIPING+F
Sbjct: 519 CTGHCNLIYPAIPHKNFDLLAKKRRNRFIMPF--QPIHERENELMPHSDISIEIPINGMF 576
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSIFAYFDDPQYRR SGITKY IG HSI +KED
Sbjct: 577 RGNSIFAYFDDPQYRRNCSGITKYGA---IGAHSIVKKED-------------------- 613
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ+KVD+ FFIPEEV+ILPESSS+MV+NNS++G+ T IT N RSRV
Sbjct: 614 -LIEYRGVKEFKPKYQMKVDRFFFIPEEVYILPESSSLMVQNNSIIGVDTQITLNTRSRV 672
Query: 44 GGLLRLEKKKKK 9
GGL+RLE+KKKK
Sbjct: 673 GGLVRLERKKKK 684
[27][TOP]
>UniRef100_A9XW73 DNA-directed RNA polymerase (Fragment) n=1 Tax=Eucryphia lucida
RepID=A9XW73_EUCLU
Length = 1280
Score = 224 bits (572), Expect = 3e-57
Identities = 116/192 (60%), Positives = 140/192 (72%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YPAI H+ + LAKRR N+F+IPF QS QER+ ELMP G+S+EIPI+GIF
Sbjct: 521 CTGHCNLIYPAILHENSDLLAKRRINKFIIPF--QSTQEREKELMPRSGISIEIPISGIF 578
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSIFAYFDDPQYRR+SSGITKY T IG+HSI +KED
Sbjct: 579 RRNSIFAYFDDPQYRRKSSGITKYGT---IGVHSIVKKED-------------------- 615
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ+KVD+ FFIPEEV+ILPE SSIMVRNNS++G+ T IT N RSRV
Sbjct: 616 -LIEYRGVKEFKPKYQMKVDRFFFIPEEVYILPEYSSIMVRNNSIIGVDTQITLNTRSRV 674
Query: 44 GGLLRLEKKKKK 9
GGL+++E+K KK
Sbjct: 675 GGLVQVERKNKK 686
[28][TOP]
>UniRef100_A1XK23 RNA polymerase beta chain (Fragment) n=1 Tax=Euptelea polyandra
RepID=A1XK23_9MAGN
Length = 796
Score = 224 bits (572), Expect = 3e-57
Identities = 117/192 (60%), Positives = 138/192 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YPA H+ +FLAKRRRNRF+IPF QS QER+ EL+P G+S+EIPINGIF
Sbjct: 103 CNGHCNFIYPASLHENSDFLAKRRRNRFIIPF--QSNQEREKELIPRSGISIEIPINGIF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR SSGITKY T I +HSI +KED
Sbjct: 161 RRNSILAYFDDPRYRRNSSGITKYGT---IEVHSIVKKED-------------------- 197
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG KE PKYQ+KVD+ FFIPEEVHI P SSSIMVRNNS++G+ T ITFN RSRV
Sbjct: 198 -LIEYRGAKEFRPKYQMKVDRFFFIPEEVHIFPGSSSIMVRNNSIIGVDTRITFNTRSRV 256
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 257 GGLVRVERKKKR 268
[29][TOP]
>UniRef100_A9XW63 DNA-directed RNA polymerase (Fragment) n=1 Tax=Connarus conchocarpus
RepID=A9XW63_9ROSI
Length = 1277
Score = 224 bits (570), Expect = 5e-57
Identities = 116/191 (60%), Positives = 140/191 (73%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + + PAI H+ + +AKRRRN+F+IPF QSIQER+ ELMP +S+EIPI+GIF
Sbjct: 521 CTGHCNLIDPAILHENSDLVAKRRRNKFIIPF--QSIQEREKELMPRSDISIEIPISGIF 578
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSIFAYFDDPQYRR+SSGITKY T IG+HSI +KED
Sbjct: 579 RRNSIFAYFDDPQYRRKSSGITKYGT---IGVHSIVKKED-------------------- 615
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQIKVD+ FFIPEEV+I PESSSIMVRNNS++G+ T IT N R+RV
Sbjct: 616 -LIEYRGVKEFKPKYQIKVDRFFFIPEEVYIFPESSSIMVRNNSIIGVDTRITLNTRNRV 674
Query: 44 GGLLRLEKKKK 12
GGL+R+E+KKK
Sbjct: 675 GGLVRVERKKK 685
[30][TOP]
>UniRef100_A9XW97 DNA-directed RNA polymerase (Fragment) n=1 Tax=Morella cerifera
RepID=A9XW97_MYRCE
Length = 1274
Score = 223 bits (568), Expect = 9e-57
Identities = 112/192 (58%), Positives = 139/192 (72%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H + +YPAI ++ + LAKRRRNRF+IPF SIQER+ ELM P G+S+EIP+NGIF
Sbjct: 519 CIGHCNLIYPAILYENSDLLAKRRRNRFIIPF--HSIQEREKELMSPSGISIEIPVNGIF 576
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDPQYRR++SGITKY T IG+HSI +KED
Sbjct: 577 RKNSILAYFDDPQYRRKNSGITKYGT---IGVHSILKKED-------------------- 613
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG++E PKYQ+K+D+ FFIPEEVHILPES SIMV+NNS++G+ T IT N RSR
Sbjct: 614 -LIEYRGVQEFKPKYQMKIDRFFFIPEEVHILPESCSIMVQNNSIIGVDTRITLNTRSRA 672
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 673 GGLVRVERKKKR 684
[31][TOP]
>UniRef100_A1XK48 RNA polymerase beta chain (Fragment) n=1 Tax=Camellia japonica
RepID=A1XK48_9ERIC
Length = 863
Score = 223 bits (568), Expect = 9e-57
Identities = 114/192 (59%), Positives = 137/192 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YP+I HD + LAKRRRNRF+IP SIQER+ ELMPP G+S+EIPINGIF
Sbjct: 103 CTGHYNLIYPSILHDNSDLLAKRRRNRFIIPL--HSIQEREKELMPPSGISIEIPINGIF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
SI AYFDDP+YRR+ SGITKY T I +HS +KED
Sbjct: 161 RRKSILAYFDDPRYRRKRSGITKYGT---IDVHSFVKKED-------------------- 197
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ+KVD+ FFIPEEVH+LP SSSIMVRNNS++G+ T IT N RSRV
Sbjct: 198 -LIEYRGVKEFRPKYQMKVDRFFFIPEEVHLLPGSSSIMVRNNSIIGVDTQITLNTRSRV 256
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 257 GGLVRVERKKKR 268
[32][TOP]
>UniRef100_A1XK09 RNA polymerase beta chain (Fragment) n=1 Tax=Pachysandra procumbens
RepID=A1XK09_PACPR
Length = 866
Score = 223 bits (568), Expect = 9e-57
Identities = 116/191 (60%), Positives = 135/191 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YP I H+ + LAKRRRNRF+IP F QER+ ELMP G+S+EIPINGIF
Sbjct: 103 CNSHLNFIYPTILHENSDLLAKRRRNRFIIPLQFN--QEREKELMPCSGISIEIPINGIF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+SSGITKY T I +HSI +KED
Sbjct: 161 RRNSILAYFDDPRYRRKSSGITKYGT---IEVHSIVKKED-------------------- 197
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
FIEYRG KE PKYQ+KVD+ FFIPEEVHI P SSSIMVRNNS++G+ T IT NIRSRV
Sbjct: 198 -FIEYRGAKEFRPKYQMKVDRFFFIPEEVHIFPGSSSIMVRNNSIIGVDTQITLNIRSRV 256
Query: 44 GGLLRLEKKKK 12
GGL R+E+KKK
Sbjct: 257 GGLARVERKKK 267
[33][TOP]
>UniRef100_Q4VZP3 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Cucumis sativus
RepID=RPOC2_CUCSA
Length = 1394
Score = 223 bits (568), Expect = 9e-57
Identities = 117/194 (60%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT S+ YPAIFH + LAKRRRN F+I F+S+QER+ EL PP G+S+EIPINGIF
Sbjct: 552 CTGQSNLTYPAIFHGNSDLLAKRRRNGFII--QFESLQEREKELRPPSGISIEIPINGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI A+FDDPQYRR SSGITKY T IG+HSI +KED
Sbjct: 610 RRNSILAFFDDPQYRRNSSGITKYGT---IGVHSILKKED-------------------- 646
Query: 224 DFIEYRGIKELNPKYQI--KVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYRG+K+ PKYQ+ KVD+ FFIPEEVHILPESSSIMVRNNS++G+ T +T +IRS
Sbjct: 647 -LIEYRGVKDFKPKYQMQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVATRLTLSIRS 705
Query: 50 RVGGLLRLEKKKKK 9
RVGGL+R+EKKKK+
Sbjct: 706 RVGGLVRVEKKKKR 719
[34][TOP]
>UniRef100_A9XW94 DNA-directed RNA polymerase (Fragment) n=1 Tax=Lythrum flagellare
RepID=A9XW94_9MYRT
Length = 1283
Score = 223 bits (567), Expect = 1e-56
Identities = 119/192 (61%), Positives = 139/192 (72%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YPAI H+ + LAKRRRNRF+IPF QSIQER+ ELMP G+SVE+PI GIF
Sbjct: 520 CTGHCNLIYPAILHENSDLLAKRRRNRFVIPF--QSIQERETELMPHAGISVELPIRGIF 577
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR SSGITKY T IG+HS+ +KED
Sbjct: 578 RRNSILAYFDDPRYRRNSSGITKYGT---IGMHSMVKKED-------------------- 614
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRGIKE KYQ K+D+ FFIPEEVHILPESSS+MVRNNSL+G+ T IT N RSRV
Sbjct: 615 -LIEYRGIKEFKQKYQ-KIDRFFFIPEEVHILPESSSMMVRNNSLIGVDTRITLNTRSRV 672
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKKK
Sbjct: 673 GGLVRVERKKKK 684
[35][TOP]
>UniRef100_A9XW74 DNA-directed RNA polymerase n=1 Tax=Euonymus americanus
RepID=A9XW74_9ROSI
Length = 1395
Score = 223 bits (567), Expect = 1e-56
Identities = 115/192 (59%), Positives = 138/192 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YP I H++++ LAKRRRNRF+IPF QSI ER+ ELM P +S+EIPINGIF
Sbjct: 552 CTGHCNLIYPPILHESYDLLAKRRRNRFIIPF--QSIPEREKELMSPADISIEIPINGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
SIFAYFDD QYRR SSGITKY T IG+HSI +KED
Sbjct: 610 RRKSIFAYFDDLQYRRNSSGITKYGT---IGVHSILKKED-------------------- 646
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKY++K+D+ FFIPEEVHILPESSSIMVRNNS++ + T I N RSRV
Sbjct: 647 -LIEYRGVKEFKPKYKMKIDRFFFIPEEVHILPESSSIMVRNNSIIRVDTRIALNTRSRV 705
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKK+
Sbjct: 706 GGLVRVEKKKKE 717
[36][TOP]
>UniRef100_A1XKE8 RNA polymerase beta chain (Fragment) n=1 Tax=Cinnamodendron ekmanii
RepID=A1XKE8_9MAGN
Length = 745
Score = 222 bits (566), Expect = 1e-56
Identities = 114/189 (60%), Positives = 137/189 (72%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
HS+FM PAI ++ NFLAKRRRNRF+IPF + QER+ ELM P +S+EIPINGI N
Sbjct: 47 HSNFMDPAILYENSNFLAKRRRNRFVIPFQYD--QEREKELMSPSAISIEIPINGILRRN 104
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 105 SILAYFDDPRYRRSSSGITKYGTV------------------------EVDSIVKKEDLI 140
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG+KEL+PKYQ+KVD+ FFIPEEVHILP SSS+MVRNNS++G+ T IT N RSRVGGL
Sbjct: 141 EYRGVKELSPKYQMKVDRFFFIPEEVHILPGSSSVMVRNNSIIGVDTRITLNTRSRVGGL 200
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 201 VRVERKKKR 209
[37][TOP]
>UniRef100_A1XKD9 RNA polymerase beta chain (Fragment) n=1 Tax=Nothofagus moorei
RepID=A1XKD9_9ROSI
Length = 777
Score = 222 bits (566), Expect = 1e-56
Identities = 117/193 (60%), Positives = 138/193 (71%), Gaps = 1/193 (0%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPI-NGI 408
CT H + +YP I H LAKRRRN+F+IPF QSIQER ELMP +G+S+EIPI NGI
Sbjct: 32 CTGHCNLIYPPIIHANSYLLAKRRRNKFIIPF--QSIQERDKELMPYFGISIEIPIINGI 89
Query: 407 FHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEK 228
FH NSI AYFDDPQYRR++SGITKY T + +HSI +KED
Sbjct: 90 FHRNSILAYFDDPQYRRKNSGITKYGT---VEVHSILKKED------------------- 127
Query: 227 EDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSR 48
IEYRG KEL PKYQ+KVD+ FFIPEEVHILPESSSIMV+NNSL+G+ T I N RSR
Sbjct: 128 --LIEYRGAKELKPKYQMKVDRFFFIPEEVHILPESSSIMVQNNSLIGVNTRIALNTRSR 185
Query: 47 VGGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 186 AGGLVRVERKKKR 198
[38][TOP]
>UniRef100_A6YAL4 RNA polymerase beta' subunit (Fragment) n=1 Tax=Penthorum sedoides
RepID=A6YAL4_9MAGN
Length = 842
Score = 222 bits (565), Expect = 2e-56
Identities = 118/194 (60%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPY--GVSVEIPING 411
CT H + M P I H+ + LAKRRRNRF+IPF QSIQER+ E +P G+S+EIPING
Sbjct: 100 CTGHCNLMDPTILHENSDLLAKRRRNRFIIPF--QSIQEREKEQIPHLDSGISIEIPING 157
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDDPQYRR SSGITKY T I +HSI +KED
Sbjct: 158 IFRRNSILAYFDDPQYRRNSSGITKYGT---IEVHSIVKKED------------------ 196
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
FIEYRG+KE P+YQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+GT IT N RS
Sbjct: 197 ---FIEYRGVKEFXPRYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVGTRITLNTRS 253
Query: 50 RVGGLLRLEKKKKK 9
RVGGL+R+E+KKK+
Sbjct: 254 RVGGLVRVERKKKR 267
[39][TOP]
>UniRef100_A9XWC5 DNA-directed RNA polymerase n=2 Tax=Trochodendron aralioides
RepID=A9XWC5_TROAR
Length = 1381
Score = 221 bits (564), Expect = 2e-56
Identities = 116/191 (60%), Positives = 138/191 (72%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YPAI H+ + LAKRRRNRF+IPF QS QER+ ELMP G+S+EIPINGIF
Sbjct: 552 CNGHCNFIYPAILHENSDLLAKRRRNRFIIPF--QSNQEREKELMPRSGISIEIPINGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+SSGITKY T I +HSI +KED
Sbjct: 610 RRNSILAYFDDPRYRRKSSGITKYGT---IEVHSIVKKED-------------------- 646
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG KE PKYQ+KVD+ FFIPEEV+ILP SSSIMVRNNS++G+ T IT N RSRV
Sbjct: 647 -LIEYRGAKEFRPKYQMKVDRFFFIPEEVYILPGSSSIMVRNNSIIGVDTRITLNTRSRV 705
Query: 44 GGLLRLEKKKK 12
GGL+R+E+KK+
Sbjct: 706 GGLVRVERKKR 716
[40][TOP]
>UniRef100_A9XWB5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spiraea tomentosa
RepID=A9XWB5_9ROSA
Length = 1264
Score = 221 bits (564), Expect = 2e-56
Identities = 116/189 (61%), Positives = 138/189 (73%), Gaps = 2/189 (1%)
Frame = -1
Query: 569 HFMYPAIFHDTFNF--LAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H ++PAI HD +F L KRRRNRF+IPF QSIQER+ +LMP G+S+EIPINGIF N
Sbjct: 519 HLIFPAILHDNSDFFLLTKRRRNRFIIPF--QSIQEREKDLMPSPGISIEIPINGIFRRN 576
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDPQYRR+SSGITKY T +G+HSI +KE I
Sbjct: 577 SILAYFDDPQYRRKSSGITKYGT---VGLHSILKKEG---------------------LI 612
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG+KE PKYQ+KVD+ FFIPEEVHI PESS+IMVRNNS++GI T IT N RSRVGGL
Sbjct: 613 EYRGVKEFKPKYQMKVDRFFFIPEEVHIFPESSAIMVRNNSIIGIDTRITLNTRSRVGGL 672
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 673 VRMERKKKR 681
[41][TOP]
>UniRef100_A1XKC9 RNA polymerase beta chain (Fragment) n=1 Tax=Takhtajania perrieri
RepID=A1XKC9_9MAGN
Length = 746
Score = 221 bits (564), Expect = 2e-56
Identities = 114/188 (60%), Positives = 134/188 (71%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI HD + LAKRRRNRF+IPF + QER+ ELMP G+S+EIPINGI H N
Sbjct: 66 HWNFIYPAILHDNSDLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILHRN 123
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 124 SILAYFDDPRYRRSSSGITKYGTV------------------------EVDSIVKKEDLI 159
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE +PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RS VGGL
Sbjct: 160 EYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNTRSHVGGL 219
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 220 VRVERKKK 227
[42][TOP]
>UniRef100_A9XWC2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tapiscia sinensis
RepID=A9XWC2_9ROSI
Length = 1280
Score = 221 bits (563), Expect = 3e-56
Identities = 115/191 (60%), Positives = 139/191 (72%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H + +Y AI H+ ++ LAKRRRNRF+IPF QSIQE++ ELMP G+S+EIPINGIF
Sbjct: 520 TGHCNLIYSAILHENYDLLAKRRRNRFIIPF--QSIQEQEKELMPRSGISIEIPINGIFR 577
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI A+FDDPQYRR SSGITKY T IG HSI +KED
Sbjct: 578 RNSILAFFDDPQYRRNSSGITKYGT---IGAHSIVKKED--------------------- 613
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+K+ PKYQ+KVD+ FFIPEEVHILPESSSIMVRNNS++G+ T IT N RS+V
Sbjct: 614 VIEYRGVKKFKPKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTRITLNTRSQVD 673
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 674 GLVRVERKKKR 684
[43][TOP]
>UniRef100_A9XW71 DNA-directed RNA polymerase (Fragment) n=1 Tax=Elaeocarpus
angustifolius RepID=A9XW71_9ROSI
Length = 1263
Score = 221 bits (563), Expect = 3e-56
Identities = 117/192 (60%), Positives = 139/192 (72%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YPAI H+ + LAKRRRN+F+IPF QSIQE LMP G+S+EIPI+GIF
Sbjct: 521 CTGHCNLIYPAILHENSDLLAKRRRNKFIIPF--QSIQE----LMPRSGISIEIPISGIF 574
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSIFAYFDDPQYRR+SSGITKY T IG+HSI +KED
Sbjct: 575 RRNSIFAYFDDPQYRRKSSGITKYGT---IGVHSIVKKED-------------------- 611
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ+K++ FFIPEEV+ILPESSSIMVRNNS++G+ T IT N RSRV
Sbjct: 612 -LIEYRGVKEFKPKYQMKINLFFFIPEEVYILPESSSIMVRNNSIIGVDTQITLNTRSRV 670
Query: 44 GGLLRLEKKKKK 9
GGL+R E+KKKK
Sbjct: 671 GGLVRAERKKKK 682
[44][TOP]
>UniRef100_A9XW55 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cannabis sativa
RepID=A9XW55_CANSA
Length = 1275
Score = 221 bits (562), Expect = 4e-56
Identities = 119/192 (61%), Positives = 139/192 (72%), Gaps = 2/192 (1%)
Frame = -1
Query: 578 DHSHFMYPAIFHDTFNF--LAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
DH + ++P+I H ++ LAKRRRNRF+IPF Q IQER+NELM +S+EIPING+F
Sbjct: 526 DHWNLIFPSILHKNYDLFLLAKRRRNRFIIPF--QWIQERENELMLRSSISIEIPINGVF 583
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDPQYRR+SSGITKY IG+HSIF+KED
Sbjct: 584 RKNSILAYFDDPQYRRKSSGITKYGA---IGLHSIFKKED-------------------- 620
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEY GIKEL PKYQ KVD+ FFIPEEVHILPESSSIMVRNNS++GI T IT N RSRV
Sbjct: 621 -LIEYVGIKELKPKYQTKVDRFFFIPEEVHILPESSSIMVRNNSIIGINTQITLNTRSRV 679
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKK+
Sbjct: 680 GGLVRVEKKKKR 691
[45][TOP]
>UniRef100_A9XW40 DNA-directed RNA polymerase n=1 Tax=Berberidopsis corallina
RepID=A9XW40_9MAGN
Length = 1389
Score = 221 bits (562), Expect = 4e-56
Identities = 115/191 (60%), Positives = 139/191 (72%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T + +YPAI ++ + LAKRR+NRF+IPF QSIQER+ ELMP G+S+EIPINGIF
Sbjct: 553 TSRCNLIYPAILYENSDLLAKRRKNRFIIPF--QSIQEREKELMPRSGISIEIPINGIFR 610
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR+SSGITKY T I +HSI +KED
Sbjct: 611 RNSILAYFDDPRYRRKSSGITKYGT---IEVHSIVKKED--------------------- 646
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RSRVG
Sbjct: 647 LIEYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVNTQITLNTRSRVG 706
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 707 GLVRVERKKKR 717
[46][TOP]
>UniRef100_A1XKF0 RNA polymerase beta chain (Fragment) n=1 Tax=Berberidopsis beckleri
RepID=A1XKF0_9MAGN
Length = 829
Score = 221 bits (562), Expect = 4e-56
Identities = 115/191 (60%), Positives = 139/191 (72%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T + +YPAI ++ + LAKRR+NRF+IPF QSIQER+ ELMP G+S+EIPINGIF
Sbjct: 70 TSRCNLIYPAILYENSDLLAKRRKNRFIIPF--QSIQEREKELMPRSGISIEIPINGIFR 127
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR+SSGITKY T I +HSI +KED
Sbjct: 128 RNSILAYFDDPRYRRKSSGITKYGT---IEVHSIVKKED--------------------- 163
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RSRVG
Sbjct: 164 LIEYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVNTQITLNTRSRVG 223
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 224 GLVRVERKKKR 234
[47][TOP]
>UniRef100_A1XK17 RNA polymerase beta chain (Fragment) n=1 Tax=Nelumbo nucifera
RepID=A1XK17_NELNU
Length = 866
Score = 221 bits (562), Expect = 4e-56
Identities = 117/192 (60%), Positives = 136/192 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YPAI H+ + LAKRRRNRF+IPF QS QER+ ELMP G+S+EIPINGIF
Sbjct: 104 CNGHCNFIYPAILHENSDLLAKRRRNRFIIPF--QSNQEREKELMPRAGISIEIPINGIF 161
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR SSGITKY T I +HSI +KED
Sbjct: 162 RRNSILAYFDDPRYRRNSSGITKYGT---IEVHSIVKKED-------------------- 198
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYR KE PKYQ KVD+ FFIPEEVHILP SSSI+VRNNS++G+ T IT N RSRV
Sbjct: 199 -LIEYRRAKEFRPKYQKKVDRFFFIPEEVHILPGSSSILVRNNSIIGVDTRITLNTRSRV 257
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKKK
Sbjct: 258 GGLVRVERKKKK 269
[48][TOP]
>UniRef100_A1XK93 RNA polymerase beta chain (Fragment) n=1 Tax=Staphylea trifolia
RepID=A1XK93_STATR
Length = 866
Score = 220 bits (561), Expect = 6e-56
Identities = 115/192 (59%), Positives = 138/192 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YPAI H+ + LAKRRRNR +IPF QSIQE++ EL+ G+S+EIPINGIF
Sbjct: 103 CIGHCNFIYPAILHENSDLLAKRRRNRLIIPF--QSIQEQEKELLSHSGISIEIPINGIF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR SSGITKY T IG+HSI +KED
Sbjct: 161 RRNSILAYFDDPRYRRNSSGITKYGT---IGVHSIVKKED-------------------- 197
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKY++KVD+ FFIPEEVHIL ESSSIMVRNNS++G+ T I N RSRV
Sbjct: 198 -LIEYRGVKEWKPKYKMKVDRFFFIPEEVHILHESSSIMVRNNSIIGVDTRIALNTRSRV 256
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKKK
Sbjct: 257 GGLVRVERKKKK 268
[49][TOP]
>UniRef100_C3KEF7 DNA-directed RNA polymerase n=1 Tax=Ceratophyllum demersum
RepID=C3KEF7_CERDE
Length = 1390
Score = 219 bits (559), Expect = 9e-56
Identities = 115/189 (60%), Positives = 134/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
+S F+YPAI H+ + LAKRRRNRFLIPF + QE++ ELM PYG+S EIPINGI N
Sbjct: 553 NSQFLYPAIPHENSDLLAKRRRNRFLIPFQYD--QEQEKELMCPYGISTEIPINGILRRN 610
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 611 SILAYFDDPRYRRSSSGITKYATI------------------------EVDSIVKKEDLI 646
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT NIRSRVGGL
Sbjct: 647 EYRGSKEFRPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNIRSRVGGL 706
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 707 VRVERKKKR 715
[50][TOP]
>UniRef100_A9XWA8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Qualea parviflora
RepID=A9XWA8_9MYRT
Length = 1272
Score = 219 bits (559), Expect = 9e-56
Identities = 115/191 (60%), Positives = 136/191 (71%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H + Y H+ + LAKRRRNRFLIP QSI+ERK ELMP G+S+E+P+NGI
Sbjct: 520 TVHCNLKYLTTLHENSDLLAKRRRNRFLIPL--QSIEERKKELMPHLGISIELPLNGILR 577
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR+SSGITKY T IG+HSI +KED
Sbjct: 578 RNSILAYFDDPRYRRKSSGITKYGT---IGVHSIVKKED--------------------- 613
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRGIKE PKYQ+K+D+ FFIPEEVHILPESSSIMVRNNSL+G+ T I NIRSRVG
Sbjct: 614 LIEYRGIKEFKPKYQMKIDRFFFIPEEVHILPESSSIMVRNNSLIGVDTSIALNIRSRVG 673
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 674 GLVRVERKKKR 684
[51][TOP]
>UniRef100_A1XKC5 RNA polymerase beta chain (Fragment) n=1 Tax=Ceratophyllum demersum
RepID=A1XKC5_CERDE
Length = 791
Score = 219 bits (559), Expect = 9e-56
Identities = 115/189 (60%), Positives = 134/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
+S F+YPAI H+ + LAKRRRNRFLIPF + QE++ ELM PYG+S EIPINGI N
Sbjct: 33 NSQFLYPAIPHENSDLLAKRRRNRFLIPFQYD--QEQEKELMCPYGISTEIPINGILRRN 90
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 91 SILAYFDDPRYRRSSSGITKYATI------------------------EVDSIVKKEDLI 126
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT NIRSRVGGL
Sbjct: 127 EYRGSKEFRPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNIRSRVGGL 186
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 187 VRVERKKKR 195
[52][TOP]
>UniRef100_A1XK12 RNA polymerase beta chain (Fragment) n=1 Tax=Tetracentron sinense
RepID=A1XK12_9MAGN
Length = 792
Score = 219 bits (559), Expect = 9e-56
Identities = 115/191 (60%), Positives = 137/191 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YPAI H+ + LAKRRRNRF+IPF QS QER+ ELMP G+S+EIPINGIF
Sbjct: 33 CNGHCNFIYPAILHENSDLLAKRRRNRFIIPF--QSNQEREKELMPRSGISIEIPINGIF 90
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+SSGITKY T I +HSI +KED
Sbjct: 91 RRNSILAYFDDPRYRRKSSGITKYGT---IEVHSIVKKED-------------------- 127
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG KE PKYQ+KVD+ FFIPEEV+ILP SSSIMVRNNS++G+ T I N RSRV
Sbjct: 128 -LIEYRGAKEFRPKYQMKVDRFFFIPEEVYILPGSSSIMVRNNSIIGVDTRIALNTRSRV 186
Query: 44 GGLLRLEKKKK 12
GGL+R+E+KK+
Sbjct: 187 GGLVRVERKKR 197
[53][TOP]
>UniRef100_A8SE78 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ceratophyllum
demersum RepID=RPOC2_CERDE
Length = 1390
Score = 219 bits (559), Expect = 9e-56
Identities = 115/189 (60%), Positives = 134/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
+S F+YPAI H+ + LAKRRRNRFLIPF + QE++ ELM PYG+S EIPINGI N
Sbjct: 553 NSQFLYPAIPHENSDLLAKRRRNRFLIPFQYD--QEQEKELMCPYGISTEIPINGILRRN 610
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 611 SILAYFDDPRYRRSSSGITKYATI------------------------EVDSIVKKEDLI 646
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT NIRSRVGGL
Sbjct: 647 EYRGSKEFRPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNIRSRVGGL 706
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 707 VRVERKKKR 715
[54][TOP]
>UniRef100_A9XWA4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phyllanthus calycinus
RepID=A9XWA4_PHYCY
Length = 1271
Score = 219 bits (557), Expect = 2e-55
Identities = 114/192 (59%), Positives = 136/192 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YPA+ H+ + LAKRRRNR +IPF QSIQER+ ELMP G+S+EIPINGIF
Sbjct: 517 CTVHCNLIYPAMLHENSDLLAKRRRNRLIIPF--QSIQEREKELMPRSGISIEIPINGIF 574
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI A+FDDP+YRR SSGITKY IG+HSI +KED
Sbjct: 575 RKNSILAFFDDPKYRRNSSGITKYGV---IGVHSIVKKED-------------------- 611
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE KYQ KVD FFIPEEV+ILPESS +MVRNNS++G+ T IT N RSRV
Sbjct: 612 -LIEYRGVKEFKTKYQTKVDCFFFIPEEVYILPESSLLMVRNNSIIGVDTQITLNTRSRV 670
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKKK
Sbjct: 671 GGLIRVERKKKK 682
[55][TOP]
>UniRef100_A1XKE6 RNA polymerase beta chain (Fragment) n=1 Tax=Degeneria vitiensis
RepID=A1XKE6_9MAGN
Length = 765
Score = 219 bits (557), Expect = 2e-55
Identities = 113/189 (59%), Positives = 133/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI H+ + LAKRRRNRF+IPF + QER+ ELMP +G+S+EIPINGI N
Sbjct: 53 HWNFLYPAILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPRFGISIEIPINGILRRN 110
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 111 SILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIVKKEDLI 146
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ+KVD+ FFIPEEVHILP SS IMVRNNS++GI T I N RSRVGGL
Sbjct: 147 EYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGIDTRIALNTRSRVGGL 206
Query: 35 LRLEKKKKK 9
+R+E+KKKK
Sbjct: 207 VRVERKKKK 215
[56][TOP]
>UniRef100_A1XKC6 RNA polymerase beta chain (Fragment) n=1 Tax=Ceratophyllum
submersum RepID=A1XKC6_CERSB
Length = 806
Score = 219 bits (557), Expect = 2e-55
Identities = 115/188 (61%), Positives = 133/188 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
+S F+YPAI H+ + LAKRRRNRFLIPF + QE++ ELM PYG+S EIPINGI N
Sbjct: 48 NSQFLYPAIPHENSDLLAKRRRNRFLIPFQYD--QEQEKELMCPYGISTEIPINGILRRN 105
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 106 SILAYFDDPRYRRSSSGITKYATI------------------------EVDSIVKKEDLI 141
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT NIRSRVGGL
Sbjct: 142 EYRGSKEFRPKYQTKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNIRSRVGGL 201
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 202 VRVERKKK 209
[57][TOP]
>UniRef100_A1XK98 RNA polymerase beta chain (Fragment) n=1 Tax=Hamamelis mollis
RepID=A1XK98_HAMMO
Length = 863
Score = 219 bits (557), Expect = 2e-55
Identities = 118/194 (60%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMP--PYGVSVEIPING 411
CT H + +YPAI + + LAKRRRNRF+IPF Q IQER+ E MP G+S+EIPING
Sbjct: 103 CTGHCNPIYPAILRENSDLLAKRRRNRFIIPF--QPIQEREKEQMPHSDSGISIEIPING 160
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDDP+YRR SSGITKY T I +HSI +KED
Sbjct: 161 IFRRNSILAYFDDPRYRRNSSGITKYGT---IEVHSIVKKED------------------ 199
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT NIRS
Sbjct: 200 ---LIEYRGVKEFKPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNIRS 256
Query: 50 RVGGLLRLEKKKKK 9
RVGGL+R+EKKKK+
Sbjct: 257 RVGGLVRVEKKKKR 270
[58][TOP]
>UniRef100_A1XK13 RNA polymerase beta chain (Fragment) n=1 Tax=Meliosma squamulata
RepID=A1XK13_9MAGN
Length = 861
Score = 219 bits (557), Expect = 2e-55
Identities = 115/192 (59%), Positives = 136/192 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C DH +F YPA H+ + LAKRRRNRF+IPF QS QER+ ELM G+S+EIPING+F
Sbjct: 103 CNDHCNFRYPATLHENSDLLAKRRRNRFIIPF--QSNQEREKELMLCSGISIEIPINGLF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR SSGITKY T I +HSI +KED
Sbjct: 161 RRNSILAYFDDPRYRRNSSGITKYGT---IEVHSILKKED-------------------- 197
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYR +KE PKYQ+KVD+ FFIPEEVHILP SSSIMV+NNS++G+ T IT N RSRV
Sbjct: 198 -LIEYRRVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVQNNSIIGVDTRITLNTRSRV 256
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKKK
Sbjct: 257 GGLVRVERKKKK 268
[59][TOP]
>UniRef100_A1XK42 RNA polymerase beta chain (Fragment) n=1 Tax=Magnolia tripetala
RepID=A1XK42_MAGTR
Length = 859
Score = 218 bits (556), Expect = 2e-55
Identities = 113/189 (59%), Positives = 133/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI H+ + LAKRRRNRF+IPF + QER+ ELMP G+S+EIPINGI N
Sbjct: 106 HWNFLYPAILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILRRN 163
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 164 SILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIVKKEDLI 199
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T I N RSRVGGL
Sbjct: 200 EYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRIALNTRSRVGGL 259
Query: 35 LRLEKKKKK 9
+R+E+KKKK
Sbjct: 260 VRVERKKKK 268
[60][TOP]
>UniRef100_A9XWC0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Suriana maritima
RepID=A9XWC0_9FABA
Length = 1274
Score = 218 bits (555), Expect = 3e-55
Identities = 117/194 (60%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YP I H+ + LAKRRRNRF+IPF QSIQE+ ELMP + +EIPINGIF
Sbjct: 519 CLGHCNFIYPDILHENSDLLAKRRRNRFIIPF--QSIQEQDKELMPGSAIWMEIPINGIF 576
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
SI AYFDDPQYR++SSGITKY T IG+H SI +KE
Sbjct: 577 RRKSILAYFDDPQYRKKSSGITKYST---IGVH---------------------SILKKE 612
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPE--SSSIMVRNNSLVGIGTPITFNIRS 51
D IEYRG+KE KYQ+KVD+ FFIPEEVHI PE SSSIMVRNNSL+ + TPIT NIRS
Sbjct: 613 DLIEYRGVKEFKLKYQMKVDRFFFIPEEVHIFPESSSSSIMVRNNSLIEVNTPITLNIRS 672
Query: 50 RVGGLLRLEKKKKK 9
RVGGL+R+EKKKK+
Sbjct: 673 RVGGLVRVEKKKKR 686
[61][TOP]
>UniRef100_A9XW58 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ceanothus prostratus
RepID=A9XW58_9ROSA
Length = 1281
Score = 218 bits (555), Expect = 3e-55
Identities = 116/191 (60%), Positives = 140/191 (73%), Gaps = 2/191 (1%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNF--LAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
H +F++P+I H+ + LAKRRRNRF+IPF Q IQ+R+ ELMP +S+EIPINGIF
Sbjct: 527 HCNFIFPSILHENSDLFLLAKRRRNRFIIPF--QWIQKREKELMPHSTISIEIPINGIFR 584
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
N IFAYFDDPQYRR+SSGITKY T IG++SI +KED
Sbjct: 585 RNIIFAYFDDPQYRRKSSGITKYGT---IGLYSILKKED--------------------- 620
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+KE PKYQ+KVD+ FFIPEEVHILPESSSIMVRNNS++G+ T IT N RSRVG
Sbjct: 621 LIEYRGVKEFKPKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTRITLNTRSRVG 680
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKKK
Sbjct: 681 GLVRVERKKKK 691
[62][TOP]
>UniRef100_A6YAK7 RNA polymerase beta' subunit (Fragment) n=1 Tax=Hamamelis japonica
RepID=A6YAK7_HAMJA
Length = 860
Score = 218 bits (555), Expect = 3e-55
Identities = 118/193 (61%), Positives = 137/193 (70%), Gaps = 2/193 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMP--PYGVSVEIPING 411
CT H + +YPAI + + LAKRRRNRF+IPF Q IQER+ E MP G+S+EIPING
Sbjct: 100 CTGHCNPIYPAILRENSDLLAKRRRNRFIIPF--QPIQEREKEQMPHSDSGISIEIPING 157
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDDP+YRR SSGITKY T I +HSI +KED
Sbjct: 158 IFRRNSILAYFDDPRYRRNSSGITKYGT---IEVHSIVKKED------------------ 196
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT NIRS
Sbjct: 197 ---LIEYRGVKEFKPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNIRS 253
Query: 50 RVGGLLRLEKKKK 12
RVGGL+R+EKKKK
Sbjct: 254 RVGGLVRVEKKKK 266
[63][TOP]
>UniRef100_A1XK37 RNA polymerase beta chain (Fragment) n=1 Tax=Drimys winteri
RepID=A1XK37_DRIWI
Length = 840
Score = 218 bits (555), Expect = 3e-55
Identities = 112/189 (59%), Positives = 134/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI H+ LAKRRRNRF+IPF + QER+ ELMP G+S+EIPINGI N
Sbjct: 82 HWNFIYPAILHENSYLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILRRN 139
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 140 SILAYFDDPRYRRSSSGITKYGTV------------------------EVDSIVKKEDLI 175
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE +PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RSR+GGL
Sbjct: 176 EYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNTRSRIGGL 235
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 236 VRVERKKKR 244
[64][TOP]
>UniRef100_Q06H07 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Drimys granadensis
RepID=RPOC2_DRIGR
Length = 1381
Score = 218 bits (555), Expect = 3e-55
Identities = 112/189 (59%), Positives = 134/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI H+ LAKRRRNRF+IPF + QER+ ELMP G+S+EIPINGI N
Sbjct: 556 HWNFIYPAILHENSYLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILRRN 613
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 614 SILAYFDDPRYRRSSSGITKYGTV------------------------EVDSIVKKEDLI 649
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE +PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RSR+GGL
Sbjct: 650 EYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNTRSRIGGL 709
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 710 VRVERKKKR 718
[65][TOP]
>UniRef100_A9XW80 DNA-directed RNA polymerase n=2 Tax=Heuchera RepID=A9XW80_HEUSA
Length = 1376
Score = 218 bits (554), Expect = 4e-55
Identities = 114/193 (59%), Positives = 139/193 (72%), Gaps = 2/193 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMP--PYGVSVEIPING 411
CTDH +F+YPAI H+ ++ L+KRR+NR +IPF QSIQER+ E MP G+S+EIPING
Sbjct: 549 CTDHCNFIYPAILHENYDLLSKRRKNRLIIPF--QSIQEREKEQMPHSDSGISIEIPING 606
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDDP+YRR SSGITKY T I +HSI +KED
Sbjct: 607 IFRKNSIMAYFDDPRYRRNSSGITKYGT---IEVHSIVKKED------------------ 645
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYRG KE P+YQ++VD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RS
Sbjct: 646 ---LIEYRGGKEFKPRYQMQVDRFFFIPEEVHILPGSSSIMVRNNSIIGVSTRITLNKRS 702
Query: 50 RVGGLLRLEKKKK 12
RVGGL+R+E+KK+
Sbjct: 703 RVGGLVRMERKKR 715
[66][TOP]
>UniRef100_A1XKB7 RNA polymerase beta chain (Fragment) n=1 Tax=Galbulimima
belgraveana RepID=A1XKB7_GALBE
Length = 811
Score = 218 bits (554), Expect = 4e-55
Identities = 112/189 (59%), Positives = 134/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI H+ + LAKR RNRF+IPF + QER+ ELMP G+S+EIPINGI N
Sbjct: 66 HWNFLYPAILHENSDLLAKRPRNRFIIPFRYD--QEREKELMPRSGISIEIPINGILRRN 123
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR+SSGITKY T + DSI +KED I
Sbjct: 124 SILAYFDDPRYRRRSSGITKYGTV------------------------EVDSIVKKEDLI 159
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+GT IT N R+RVGGL
Sbjct: 160 EYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVGTRITLNTRNRVGGL 219
Query: 35 LRLEKKKKK 9
+R+E+KKKK
Sbjct: 220 VRVERKKKK 228
[67][TOP]
>UniRef100_A1XK62 RNA polymerase beta chain (Fragment) n=1 Tax=Dillenia indica
RepID=A1XK62_DILIN
Length = 854
Score = 218 bits (554), Expect = 4e-55
Identities = 114/191 (59%), Positives = 137/191 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT HS+ +YPAI + N LAKRRRN F+IPF QSIQ+R+ EL+PP G+S+EIPIN IF
Sbjct: 86 CTSHSNLIYPAILYGNSNLLAKRRRNGFIIPF--QSIQKREKELIPPSGISIEIPINSIF 143
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI+AYFDDP+YRR+SSGITKY T + +HSI +KED
Sbjct: 144 CINSIYAYFDDPRYRRRSSGITKYGT---VEVHSIVKKED-------------------- 180
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ K D+ FFIPEEVHILP SS IMVRNNS++G+ T IT N RSRV
Sbjct: 181 -LIEYRGVKEFRPKYQRKGDRFFFIPEEVHILPGSSFIMVRNNSIIGVDTRITLNTRSRV 239
Query: 44 GGLLRLEKKKK 12
GGL+R+E+KKK
Sbjct: 240 GGLVRVERKKK 250
[68][TOP]
>UniRef100_A9XW95 DNA-directed RNA polymerase (Fragment) n=1 Tax=Manihot esculenta
RepID=A9XW95_MANES
Length = 1281
Score = 217 bits (553), Expect = 5e-55
Identities = 112/192 (58%), Positives = 136/192 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +Y I + + LAKRRRN+F+IPF QSIQER+ ELM +S+EIPINGIF
Sbjct: 522 CTGHCNLIYSTILYKNSDLLAKRRRNKFIIPF--QSIQEREKELMTQSAISIEIPINGIF 579
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NS+FAYFDDPQYR++SSGITKY IG+HSI +KED
Sbjct: 580 RRNSVFAYFDDPQYRKKSSGITKYGA---IGVHSIVKKED-------------------- 616
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ KVD+ FFIPEEV+ILPESSS+MVRNNS++G+ T I N RSRV
Sbjct: 617 -LIEYRGVKEFKPKYQTKVDRFFFIPEEVYILPESSSLMVRNNSIIGVDTQIALNTRSRV 675
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKKK
Sbjct: 676 GGLVRVERKKKK 687
[69][TOP]
>UniRef100_A1XK64 RNA polymerase beta chain (Fragment) n=1 Tax=Spathiphyllum wallisii
RepID=A1XK64_SPAWA
Length = 856
Score = 217 bits (553), Expect = 5e-55
Identities = 108/189 (57%), Positives = 133/189 (70%)
Frame = -1
Query: 578 DHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHS 399
DH +F YP+I H+ +FLAKRRRNR +IP + +ER+ E +P +GVS+EIPINGI
Sbjct: 98 DHWNFKYPSILHENSDFLAKRRRNRLIIPLQYDQEREREKEPIPRFGVSIEIPINGILRR 157
Query: 398 NSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDF 219
NSI AYFDDP+YRR SSGITKY T + DSI +KED
Sbjct: 158 NSILAYFDDPRYRRNSSGITKYGTV------------------------EVDSIVKKEDL 193
Query: 218 IEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGG 39
IEYRG KE +PKYQ+KVD+ FFIPEEVH+LP SS IMVRNNS++G+ TP+T N RSRVGG
Sbjct: 194 IEYRGAKEFSPKYQMKVDRFFFIPEEVHVLPGSSLIMVRNNSIIGVDTPLTLNTRSRVGG 253
Query: 38 LLRLEKKKK 12
L+R+E+KKK
Sbjct: 254 LVRVERKKK 262
[70][TOP]
>UniRef100_A1XK54 RNA polymerase beta chain (Fragment) n=1 Tax=Hedera helix
RepID=A1XK54_HEDHE
Length = 863
Score = 217 bits (553), Expect = 5e-55
Identities = 114/189 (60%), Positives = 135/189 (71%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H + Y AI H ++ LAKRRRNRF+IP QSIQE +NELMP G+S+EIPINGIF N
Sbjct: 103 HCNLTYLAILHANYDLLAKRRRNRFIIPL--QSIQEHENELMPSSGISIEIPINGIFRKN 160
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR+SSGITKY T I +HSI +KED I
Sbjct: 161 SILAYFDDPRYRRKSSGITKYGT---IEVHSIVKKED---------------------LI 196
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT RSRVGGL
Sbjct: 197 EYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQITLTTRSRVGGL 256
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 257 VRVERKKKR 265
[71][TOP]
>UniRef100_B1NWE0 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Manihot esculenta
RepID=RPOC2_MANES
Length = 1393
Score = 217 bits (553), Expect = 5e-55
Identities = 112/192 (58%), Positives = 136/192 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +Y I + + LAKRRRN+F+IPF QSIQER+ ELM +S+EIPINGIF
Sbjct: 552 CTGHCNLIYSTILYKNSDLLAKRRRNKFIIPF--QSIQEREKELMTQSAISIEIPINGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NS+FAYFDDPQYR++SSGITKY IG+HSI +KED
Sbjct: 610 RRNSVFAYFDDPQYRKKSSGITKYGA---IGVHSIVKKED-------------------- 646
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ KVD+ FFIPEEV+ILPESSS+MVRNNS++G+ T I N RSRV
Sbjct: 647 -LIEYRGVKEFKPKYQTKVDRFFFIPEEVYILPESSSLMVRNNSIIGVDTQIALNTRSRV 705
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKKK
Sbjct: 706 GGLVRVERKKKK 717
[72][TOP]
>UniRef100_A4QK95 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Barbarea verna
RepID=RPOC2_BARVE
Length = 1379
Score = 217 bits (552), Expect = 6e-55
Identities = 110/191 (57%), Positives = 139/191 (72%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H +F+Y AIFH+ + LAKRRRNRFLIPF QSIQE++ E +P G+S+EIPINGIF
Sbjct: 551 TSHYNFIYSAIFHENSDLLAKRRRNRFLIPF--QSIQEQEKEFIPHSGISIEIPINGIFR 608
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIFA+FDDP+YRR+SSGI KY T K DSI +KED
Sbjct: 609 RNSIFAFFDDPRYRRKSSGILKYGTL------------------------KADSIIQKED 644
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+++ KY++KVD+ FFIPEEVHILPESS+IMV+N S++G+ T IT N+RSRVG
Sbjct: 645 MIEYRGVQKFKTKYEMKVDRFFFIPEEVHILPESSAIMVQNYSIIGVDTRITLNLRSRVG 704
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 705 GLIRVERKKKR 715
[73][TOP]
>UniRef100_A6YAJ9 RNA polymerase beta' subunit (Fragment) n=1 Tax=Aphanopetalum
resinosum RepID=A6YAJ9_9MAGN
Length = 811
Score = 216 bits (550), Expect = 1e-54
Identities = 115/194 (59%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMP--PYGVSVEIPING 411
CT H + +YP I H+ + LAKRRRNRF+IPF S+QER+ E +P G S+EIPING
Sbjct: 99 CTSHCNLIYPTILHENSDLLAKRRRNRFIIPFI--SLQEREKEQIPYLESGSSIEIPING 156
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSIFAYFDDP+YRR+SSGITKY T I +HSI +KED
Sbjct: 157 IFRRNSIFAYFDDPKYRRKSSGITKYGT---IELHSIVKKED------------------ 195
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYRG+KE P+YQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+GT IT N RS
Sbjct: 196 ---LIEYRGVKEFKPRYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVGTRITLNTRS 252
Query: 50 RVGGLLRLEKKKKK 9
RVGGL+R+E KKK+
Sbjct: 253 RVGGLVRVEIKKKR 266
[74][TOP]
>UniRef100_A1XK92 RNA polymerase beta chain (Fragment) n=1 Tax=Atherosperma moschatum
RepID=A1XK92_9MAGN
Length = 857
Score = 216 bits (550), Expect = 1e-54
Identities = 115/189 (60%), Positives = 134/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI HD + LAKRRRNRF+IPF QS QER+ L+P G+S+EIPINGI N
Sbjct: 104 HWNFIYPAILHDNSDLLAKRRRNRFIIPF--QSDQEREKALIPCSGISIEIPINGILRRN 161
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T IG+ DSI +KED I
Sbjct: 162 SILAYFDDPRYRRSSSGITKYGT---IGV---------------------DSIVKKEDLI 197
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+ T I N RSRVGGL
Sbjct: 198 EYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIALNTRSRVGGL 257
Query: 35 LRLEKKKKK 9
+R+E+KKKK
Sbjct: 258 VRVERKKKK 266
[75][TOP]
>UniRef100_A1XKE1 RNA polymerase beta chain (Fragment) n=1 Tax=Didymeles perrieri
RepID=A1XKE1_9MAGN
Length = 818
Score = 216 bits (549), Expect = 1e-54
Identities = 110/192 (57%), Positives = 136/192 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C +F+YP + HD ++ LAK+R+NRF+IP QS QER+ ELMP G+S+EIPINGIF
Sbjct: 56 CNGRLNFIYPTMLHDNYDLLAKKRKNRFIIPL--QSNQEREKELMPCSGISIEIPINGIF 113
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+Y+R SSGITKY T + SI +KE
Sbjct: 114 RRNSILAYFDDPRYKRNSSGITKYGT------------------------REVHSILKKE 149
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEY+G KE +PKYQ+KVD+ FFIPEEVHILP +SSIMVRNNS++G+ T IT NIRSRV
Sbjct: 150 DLIEYQGKKEFSPKYQMKVDRFFFIPEEVHILPGASSIMVRNNSIIGVDTQITLNIRSRV 209
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKK+
Sbjct: 210 GGLVRVEKKKKR 221
[76][TOP]
>UniRef100_A1XK36 RNA polymerase beta chain (Fragment) n=1 Tax=Tasmannia insipida
RepID=A1XK36_TASIN
Length = 825
Score = 216 bits (549), Expect = 1e-54
Identities = 111/187 (59%), Positives = 133/187 (71%)
Frame = -1
Query: 569 HFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSNSI 390
+F+YPAI H+ + LAKRRRNRF+IPF + QER+ ELMP G+S+EIPINGI NSI
Sbjct: 70 NFIYPAILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILRRNSI 127
Query: 389 FAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFIEY 210
AYFDDP+YRR SSGITKY T + DSI +KED IEY
Sbjct: 128 LAYFDDPRYRRSSSGITKYGTV------------------------EVDSIVKKEDLIEY 163
Query: 209 RGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLLR 30
RG KE +PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RS VGGL+R
Sbjct: 164 RGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNTRSHVGGLVR 223
Query: 29 LEKKKKK 9
+E+KKK+
Sbjct: 224 VERKKKR 230
[77][TOP]
>UniRef100_P56764 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Arabidopsis
thaliana RepID=RPOC2_ARATH
Length = 1376
Score = 216 bits (549), Expect = 1e-54
Identities = 110/191 (57%), Positives = 139/191 (72%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H + +Y AIFH+ + LAKRRRNRFLIPF QSIQE++ E +P G+SVEIPINGIF
Sbjct: 551 TSHYNLIYSAIFHENSDLLAKRRRNRFLIPF--QSIQEQEKEFIPQSGISVEIPINGIFR 608
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIFA+FDDP+YRR+SSGI KY T K DSI +KED
Sbjct: 609 RNSIFAFFDDPRYRRKSSGILKYGTL------------------------KADSIIQKED 644
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG++++ KY++KVD+ FFIPEEVHILPESS+IMV+N S++G+ T +T NIRS+VG
Sbjct: 645 MIEYRGVQKIKTKYEMKVDRFFFIPEEVHILPESSAIMVQNYSIIGVDTRLTLNIRSQVG 704
Query: 41 GLLRLEKKKKK 9
GL+R+EKKKK+
Sbjct: 705 GLIRVEKKKKR 715
[78][TOP]
>UniRef100_A1XKB1 RNA polymerase beta chain (Fragment) n=1 Tax=Daphnandra micrantha
RepID=A1XKB1_9MAGN
Length = 824
Score = 215 bits (548), Expect = 2e-54
Identities = 115/189 (60%), Positives = 134/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI HD + LAKRRRNRF+IPF QS QER+ EL+P G+S+EIPINGI N
Sbjct: 77 HWNFIYPAILHDNSDLLAKRRRNRFIIPF--QSDQEREKELIPCSGISIEIPINGILRRN 134
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T IG+ DSI +KED I
Sbjct: 135 SILAYFDDPRYRRSSSGITKYGT---IGV---------------------DSIVKKEDLI 170
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYR KE PKYQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+ T I N RSRVGGL
Sbjct: 171 EYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIALNTRSRVGGL 230
Query: 35 LRLEKKKKK 9
+R+E+KKKK
Sbjct: 231 VRVERKKKK 239
[79][TOP]
>UniRef100_A9XW64 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coriaria nepalensis
RepID=A9XW64_9ROSI
Length = 1283
Score = 215 bits (547), Expect = 2e-54
Identities = 109/192 (56%), Positives = 137/192 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YP+IFH AKRRRNRF+I F+S+QER+ EL+P +S+EIPIN IF
Sbjct: 523 CTGHCNLIYPSIFHGNSYLFAKRRRNRFII--QFESLQEREKELLPRSSISIEIPINHIF 580
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
N+I AYFDDPQYRR+ SGITKY T IG+H + +KED
Sbjct: 581 RRNTILAYFDDPQYRRKGSGITKYGT---IGVHPVLKKED-------------------- 617
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
FIEYRG+ E PKY+++VD+ FFIPEEVHILPESSSIMVRNNS++G+ T IT +IRS+V
Sbjct: 618 -FIEYRGVTEFKPKYKMEVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTRITLSIRSQV 676
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKK+
Sbjct: 677 GGLVRVEKKKKR 688
[80][TOP]
>UniRef100_A6YAK0 RNA polymerase beta' subunit (Fragment) n=1 Tax=Cercidiphyllum
japonicum RepID=A6YAK0_CERJA
Length = 798
Score = 215 bits (547), Expect = 2e-54
Identities = 115/194 (59%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMP--PYGVSVEIPING 411
CT H + +YPAI + + LAKRRRNRF+IPF QSIQER+ E M G+S+EIPING
Sbjct: 100 CTGHCNLIYPAILRENSDLLAKRRRNRFIIPF--QSIQEREKEQMSHSDSGISIEIPING 157
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDDP+YRR SSGITKY T I +HSI +KED
Sbjct: 158 IFRRNSILAYFDDPRYRRNSSGITKYGT---IEVHSIVKKED------------------ 196
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYRG+KE P+YQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RS
Sbjct: 197 ---LIEYRGVKEFKPRYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNTRS 253
Query: 50 RVGGLLRLEKKKKK 9
RVGGL+R+E+KKK+
Sbjct: 254 RVGGLVRVERKKKR 267
[81][TOP]
>UniRef100_A1XKC7 RNA polymerase beta chain (Fragment) n=1 Tax=Xanthorrhoea
quadrangulata RepID=A1XKC7_XANQU
Length = 811
Score = 215 bits (547), Expect = 2e-54
Identities = 109/188 (57%), Positives = 137/188 (72%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP+I + +FLAKRRRNRFLIP + QER+ EL+PP+G+S+EIPINGI N
Sbjct: 56 HWNFIYPSILQENSDFLAKRRRNRFLIPLQYD--QEREKELIPPFGISIEIPINGILRRN 113
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR+SSGITKY T +G+ DSI +KED I
Sbjct: 114 SILAYFDDPRYRRKSSGITKYGT---VGV---------------------DSIVKKEDLI 149
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EY+G KE +PKYQ+KVD+ FFIPEEVHILP SSSIMV+NNS++G+ T + N RSRVGGL
Sbjct: 150 EYQGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVQNNSIIGVDTQLALNTRSRVGGL 209
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 210 VRVERKKK 217
[82][TOP]
>UniRef100_A1XKA0 RNA polymerase beta chain (Fragment) n=1 Tax=Canella winterana
RepID=A1XKA0_CANWI
Length = 762
Score = 215 bits (547), Expect = 2e-54
Identities = 112/188 (59%), Positives = 134/188 (71%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
HS+FM PAI ++ +FLAKRRRNRF+IPF + QER+ ELM P +S+EIPINGI N
Sbjct: 75 HSNFMDPAIIYENSDFLAKRRRNRFVIPFQYD--QEREKELMFPSAISIEIPINGILRRN 132
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AY DDP+YRR SSGITKY T + DSI +KED I
Sbjct: 133 SILAYLDDPRYRRSSSGITKYGTV------------------------EVDSIVKKEDLI 168
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KEL+PKYQ+KVD+ FFIPEEVHILP SSS+MVRNNS++G+ T IT N RSRVGGL
Sbjct: 169 EYRGAKELSPKYQMKVDRFFFIPEEVHILPASSSVMVRNNSIIGVDTRITLNTRSRVGGL 228
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 229 VRVERKKK 236
[83][TOP]
>UniRef100_A1XK88 RNA polymerase beta chain (Fragment) n=1 Tax=Asarum canadense
RepID=A1XK88_ASACA
Length = 822
Score = 215 bits (547), Expect = 2e-54
Identities = 112/191 (58%), Positives = 134/191 (70%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H +F+Y AI H+ + LAKRRRN FLIPF + QE++ ELMP G+S+EIPI GIF
Sbjct: 64 TGHWNFIYSAILHENSDLLAKRRRNGFLIPFQYD--QEQEKELMPRSGISIEIPITGIFR 121
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR SSGITKY T + DSI +KED
Sbjct: 122 KNSILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIVKKED 157
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG KEL+PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T I N RSRVG
Sbjct: 158 LIEYRGAKELSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVNTQIALNTRSRVG 217
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 218 GLVRVERKKKR 228
[84][TOP]
>UniRef100_A1XK67 RNA polymerase beta chain (Fragment) n=1 Tax=Chimonanthus praecox
RepID=A1XK67_9MAGN
Length = 857
Score = 215 bits (547), Expect = 2e-54
Identities = 113/189 (59%), Positives = 134/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI H+ + LAKRRRNRF+IPF QS QER+ ELMP G+S+EIPINGI N
Sbjct: 106 HWNFIYPAILHENSDLLAKRRRNRFIIPF--QSDQEREKELMPRSGISIEIPINGILRRN 163
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY TT G+ DSI +KED I
Sbjct: 164 SILAYFDDPRYRRSSSGITKYGTT---GV---------------------DSIVKKEDLI 199
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYR KE PKYQ+KVD+ FFIPEEVHILP SS +MVRNNS++G+ T I N RSRVGGL
Sbjct: 200 EYRRAKEFRPKYQMKVDRFFFIPEEVHILPASSPVMVRNNSIIGVDTRIALNTRSRVGGL 259
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 260 VRVERKKKR 268
[85][TOP]
>UniRef100_A1XK10 RNA polymerase beta chain (Fragment) n=1 Tax=Buxus sempervirens
RepID=A1XK10_BUXSE
Length = 865
Score = 215 bits (547), Expect = 2e-54
Identities = 114/191 (59%), Positives = 134/191 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YP I H+ + LAKRRRNRF++P QS QER+ ELMP G+S+EIPINGIF
Sbjct: 103 CNGHLNFIYPTILHENSDLLAKRRRNRFILPL--QSNQEREKELMPCSGISIEIPINGIF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP YRR+SSGITKY T I +HSI +KED
Sbjct: 161 RRNSILAYFDDPLYRRKSSGITKYGT---IEVHSIVKKED-------------------- 197
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG KE KYQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+ T IT NIRSRV
Sbjct: 198 -LIEYRGAKEFRSKYQMKVDRFFFIPEEVHILPGSSYIMVRNNSIIGVDTRITLNIRSRV 256
Query: 44 GGLLRLEKKKK 12
GGL+R+E+KKK
Sbjct: 257 GGLVRVERKKK 267
[86][TOP]
>UniRef100_Q7YJY0 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Calycanthus
floridus var. glaucus RepID=RPOC2_CALFG
Length = 1377
Score = 215 bits (547), Expect = 2e-54
Identities = 113/189 (59%), Positives = 134/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI H+ + LAKRRRNRF+IPF QS QER+ ELMP G+S+EIPINGI N
Sbjct: 556 HWNFIYPAILHENSDLLAKRRRNRFIIPF--QSDQEREKELMPRSGISIEIPINGILRRN 613
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T IG+ DSI +KED I
Sbjct: 614 SILAYFDDPRYRRSSSGITKYGT---IGV---------------------DSIVKKEDLI 649
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYR KE PKYQ+KVD+ FFIPEEVHILP SS +MVRNNS++G+ T I N RSRVGGL
Sbjct: 650 EYRRAKEFRPKYQMKVDRFFFIPEEVHILPASSPVMVRNNSIIGVNTRIALNTRSRVGGL 709
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 710 VRVERKKKR 718
[87][TOP]
>UniRef100_A6MM26 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Buxus microphylla
RepID=RPOC2_BUXMI
Length = 1391
Score = 215 bits (547), Expect = 2e-54
Identities = 114/191 (59%), Positives = 134/191 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YP I H+ + LAKRRRNRF++P QS QER+ ELMP G+S+EIPINGIF
Sbjct: 552 CNGHLNFIYPTILHENSDLLAKRRRNRFILPL--QSNQEREKELMPCSGISIEIPINGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP YRR+SSGITKY T I +HSI +KED
Sbjct: 610 RRNSILAYFDDPLYRRKSSGITKYGT---IEVHSIVKKED-------------------- 646
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG KE KYQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+ T IT NIRSRV
Sbjct: 647 -LIEYRGAKEFRSKYQMKVDRFFFIPEEVHILPGSSYIMVRNNSIIGVDTRITLNIRSRV 705
Query: 44 GGLLRLEKKKK 12
GGL+R+E+KKK
Sbjct: 706 GGLVRVERKKK 716
[88][TOP]
>UniRef100_A9XW91 DNA-directed RNA polymerase (Fragment) n=1 Tax=Leea guineensis
RepID=A9XW91_LEEGU
Length = 1260
Score = 214 bits (546), Expect = 3e-54
Identities = 113/191 (59%), Positives = 135/191 (70%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T + + PAI H+ + LAKRRRNRF+IPF QSIQER+ ELMPP G+S+EIPINGIF
Sbjct: 503 TGRCNLIDPAILHENSDLLAKRRRNRFIIPF--QSIQEREKELMPPSGISIEIPINGIFR 560
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDD +YRR SSGITKY T I +HSI +KED
Sbjct: 561 RNSILAYFDDARYRRNSSGITKYGT---IEVHSIVKKED--------------------- 596
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+KE PKYQ+KVD+ FFIPEEVHILP S+SIMVR NS++G+ T I N RSR+G
Sbjct: 597 LIEYRGVKEFKPKYQMKVDRFFFIPEEVHILPGSASIMVRTNSIIGVDTRIALNTRSRIG 656
Query: 41 GLLRLEKKKKK 9
GL+R+EKKKK+
Sbjct: 657 GLVRVEKKKKR 667
[89][TOP]
>UniRef100_A6YAK8 RNA polymerase beta' subunit (Fragment) n=1 Tax=Heuchera micrantha
RepID=A6YAK8_HEUMI
Length = 802
Score = 214 bits (546), Expect = 3e-54
Identities = 113/193 (58%), Positives = 138/193 (71%), Gaps = 2/193 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMP--PYGVSVEIPING 411
CT H +F+YPAI H+ ++ L+KRR+NR +IPF QSIQER+ E MP G+S+EIPING
Sbjct: 60 CTXHCNFIYPAILHENYDLLSKRRKNRLIIPF--QSIQEREKEQMPHSDSGISIEIPING 117
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDDP+YRR SSGITKY T I +HSI +KED
Sbjct: 118 IFRKNSIXAYFDDPRYRRNSSGITKYGT---IEVHSIVKKED------------------ 156
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYRG KE P+YQ++VD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RS
Sbjct: 157 ---LIEYRGGKEFKPRYQMQVDRFFFIPEEVHILPGSSSIMVRNNSIIGVSTRITLNKRS 213
Query: 50 RVGGLLRLEKKKK 12
RVGGL+R+E+KK+
Sbjct: 214 RVGGLVRMERKKR 226
[90][TOP]
>UniRef100_A1XKC3 RNA polymerase beta chain (Fragment) n=1 Tax=Pleea tenuifolia
RepID=A1XKC3_9LILI
Length = 821
Score = 214 bits (546), Expect = 3e-54
Identities = 110/186 (59%), Positives = 133/186 (71%)
Frame = -1
Query: 569 HFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSNSI 390
+F+Y I H+ +FLAKRRRNRF+IP + QER+ EL+PP+G S+EIPINGI H NSI
Sbjct: 65 NFIYSYILHENSDFLAKRRRNRFIIPLQYD--QEREKELIPPFGSSIEIPINGILHRNSI 122
Query: 389 FAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFIEY 210
AYFDDP+YRR SSGITKY T + DSI +KED IEY
Sbjct: 123 LAYFDDPRYRRSSSGITKYGTI------------------------EVDSIVKKEDLIEY 158
Query: 209 RGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLLR 30
+G KE +PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RSRVGGL+R
Sbjct: 159 QGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNTRSRVGGLVR 218
Query: 29 LEKKKK 12
+E+KKK
Sbjct: 219 VERKKK 224
[91][TOP]
>UniRef100_A1XKA9 RNA polymerase beta chain (Fragment) n=1 Tax=Guaiacum officinale
RepID=A1XKA9_9ROSI
Length = 879
Score = 214 bits (546), Expect = 3e-54
Identities = 116/190 (61%), Positives = 136/190 (71%), Gaps = 1/190 (0%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNEL-MPPYGVSVEIPINGIFHS 399
H F+YPAI + + LAKRRRNRFLIPF QS E+ NEL MP +S+EIP NGIFH
Sbjct: 106 HCDFIYPAILQENSDLLAKRRRNRFLIPF--QSSPEQNNELRMPRSRISIEIPPNGIFHR 163
Query: 398 NSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDF 219
NSI AY DDPQYRR+SSGITKYRT IG HSI +KED +
Sbjct: 164 NSIIAYLDDPQYRRKSSGITKYRT---IGAHSIAKKED---------------------W 199
Query: 218 IEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGG 39
IEY+G+KE PKYQ+KVD+ FFIPEEVHILPESS IMVR+NSL+G+ T IT N RSR+GG
Sbjct: 200 IEYKGVKEFQPKYQMKVDRFFFIPEEVHILPESSPIMVRDNSLIGVDTQITLNTRSRMGG 259
Query: 38 LLRLEKKKKK 9
L+R+EKKKK+
Sbjct: 260 LVRVEKKKKR 269
[92][TOP]
>UniRef100_A1XK68 RNA polymerase beta chain (Fragment) n=1 Tax=Idiospermum
australiense RepID=A1XK68_IDIAU
Length = 851
Score = 214 bits (546), Expect = 3e-54
Identities = 114/189 (60%), Positives = 134/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI H+ + LAKRRRNRF+IPF QS QER+ ELMP G+S+EIPINGI N
Sbjct: 98 HWNFIYPAILHENSDLLAKRRRNRFIIPF--QSDQEREKELMPRSGISIEIPINGILRRN 155
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T IG+ DSI +KED I
Sbjct: 156 SILAYFDDPRYRRSSSGITKYGT---IGV---------------------DSIVKKEDLI 191
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYR KE PKYQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+ T I N RSRVGGL
Sbjct: 192 EYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIALNTRSRVGGL 251
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 252 VRVERKKKR 260
[93][TOP]
>UniRef100_A9XW77 DNA-directed RNA polymerase (Fragment) n=1 Tax=Guaiacum officinale
RepID=A9XW77_9ROSI
Length = 1110
Score = 214 bits (545), Expect = 4e-54
Identities = 115/190 (60%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNEL-MPPYGVSVEIPINGIFHS 399
H F+YPAI + + LAKRRRNRFLIPF F E+ NEL MP +S+EIP NGIFH
Sbjct: 520 HCDFIYPAILQENSDLLAKRRRNRFLIPFQFSP--EQNNELRMPRSRISIEIPPNGIFHR 577
Query: 398 NSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDF 219
NSI AY DDPQYRR+SSGITKYRT IG HSI +KED +
Sbjct: 578 NSIIAYLDDPQYRRKSSGITKYRT---IGAHSIAKKED---------------------W 613
Query: 218 IEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGG 39
IEY+G+KE PKYQ+KVD+ FFIPEEVHILPESS IMVR+NSL+G+ T IT N RSR+GG
Sbjct: 614 IEYKGVKEFQPKYQMKVDRFFFIPEEVHILPESSPIMVRDNSLIGVDTQITLNTRSRMGG 673
Query: 38 LLRLEKKKKK 9
L+R+EKKKK+
Sbjct: 674 LVRVEKKKKR 683
[94][TOP]
>UniRef100_A1XK66 RNA polymerase beta chain (Fragment) n=1 Tax=Calycanthus floridus
RepID=A1XK66_CALFL
Length = 861
Score = 214 bits (545), Expect = 4e-54
Identities = 113/188 (60%), Positives = 133/188 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI H+ + LAKRRRNRF+IPF QS QER+ ELMP G+S+EIPINGI N
Sbjct: 106 HWNFIYPAILHENSDLLAKRRRNRFIIPF--QSDQEREKELMPRSGISIEIPINGILRRN 163
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T IG+ DSI +KED I
Sbjct: 164 SILAYFDDPRYRRSSSGITKYGT---IGV---------------------DSIVKKEDLI 199
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYR KE PKYQ+KVD+ FFIPEEVHILP SS +MVRNNS++G+ T I N RSRVGGL
Sbjct: 200 EYRRAKEFRPKYQMKVDRFFFIPEEVHILPASSPVMVRNNSIIGVNTRIALNTRSRVGGL 259
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 260 VRVERKKK 267
[95][TOP]
>UniRef100_A1XK06 RNA polymerase beta chain (Fragment) n=1 Tax=Vitis sp. Qiu 94046
RepID=A1XK06_9MAGN
Length = 844
Score = 214 bits (545), Expect = 4e-54
Identities = 112/191 (58%), Positives = 134/191 (70%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T + + PAI H+ + LAKRRRNRF+IPF QSIQE + ELMPP G+S+EIPINGIF
Sbjct: 80 TGRYNLIDPAILHENSDLLAKRRRNRFIIPF--QSIQEGEKELMPPSGISIEIPINGIFR 137
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR SSGITKY T + SI +KED
Sbjct: 138 RNSILAYFDDPRYRRNSSGITKYGTI------------------------EAHSIVKKED 173
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+KE PKYQ+KVD+ FFIPEEVHILP S+SIMVRNNS++G+ T IT N RSRV
Sbjct: 174 LIEYRGVKEFKPKYQMKVDRFFFIPEEVHILPGSASIMVRNNSIIGVDTRITLNTRSRVS 233
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 234 GLVRVERKKKR 244
[96][TOP]
>UniRef100_Q0ZJ30 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Vitis vinifera
RepID=RPOC2_VITVI
Length = 1394
Score = 214 bits (545), Expect = 4e-54
Identities = 112/191 (58%), Positives = 134/191 (70%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T + + PAI H+ + LAKRRRNRF+IPF QSIQE + ELMPP G+S+EIPINGIF
Sbjct: 553 TGRYNLIDPAILHENSDLLAKRRRNRFIIPF--QSIQEGEKELMPPSGISIEIPINGIFR 610
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR SSGITKY T + SI +KED
Sbjct: 611 RNSILAYFDDPRYRRNSSGITKYGTI------------------------EAHSIVKKED 646
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+KE PKYQ+KVD+ FFIPEEVHILP S+SIMVRNNS++G+ T IT N RSRV
Sbjct: 647 LIEYRGVKEFKPKYQMKVDRFFFIPEEVHILPGSASIMVRNNSIIGVDTRITLNTRSRVS 706
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 707 GLVRVERKKKR 717
[97][TOP]
>UniRef100_A4QLI4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lobularia maritima
RepID=RPOC2_LOBMA
Length = 1371
Score = 214 bits (545), Expect = 4e-54
Identities = 109/191 (57%), Positives = 138/191 (72%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H +F+Y AIFH+ + LAKRRRNRFLIPF QSIQE++ E +P G+S+EIPINGIF
Sbjct: 551 TSHYNFIYSAIFHENSDLLAKRRRNRFLIPF--QSIQEQEKEFIPHSGISIEIPINGIFR 608
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIFA+FDDP+YRR+S GI KY T K DSI +KED
Sbjct: 609 RNSIFAFFDDPRYRRKSCGILKYGTL------------------------KADSIIQKED 644
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+++ KY++KVD+ FFIPEEVHILPESS+IMV+N S++G+ T IT NIRS+VG
Sbjct: 645 MIEYRGVQKFKTKYEMKVDRFFFIPEEVHILPESSAIMVQNYSIIGVDTRITLNIRSQVG 704
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 705 GLIRVERKKKR 715
[98][TOP]
>UniRef100_A4QL96 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lepidium
virginicum RepID=RPOC2_LEPVR
Length = 1373
Score = 214 bits (545), Expect = 4e-54
Identities = 109/191 (57%), Positives = 138/191 (72%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H +F+Y AIFH+ + LAKRRRNRFLIPF Q IQE++ E +P G+S+EIPINGIF
Sbjct: 551 TSHYNFIYSAIFHENSDLLAKRRRNRFLIPF--QPIQEQEKEFIPHSGISIEIPINGIFR 608
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIFA+FDDP+YRR+SSGI KY T K DSI +KED
Sbjct: 609 RNSIFAFFDDPRYRRKSSGILKYGTL------------------------KADSIIQKED 644
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+++ KY++KVD+ FFIPEEVHILPESS+IMV+N S++G+ T IT NIRS+VG
Sbjct: 645 MIEYRGVQKFKTKYEMKVDRFFFIPEEVHILPESSAIMVQNYSIIGVDTRITLNIRSQVG 704
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 705 GLIRVERKKKR 715
[99][TOP]
>UniRef100_A4QKS1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Crucihimalaya
wallichii RepID=RPOC2_CRUWA
Length = 1379
Score = 214 bits (545), Expect = 4e-54
Identities = 109/191 (57%), Positives = 137/191 (71%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H +F+Y AIFH + LAKRRRNRFLIPF QSIQE++ E +P G+S+EIPINGIF
Sbjct: 551 TSHYNFIYSAIFHKNSDLLAKRRRNRFLIPF--QSIQEQEKEFIPHSGISIEIPINGIFR 608
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIFA+FDDP+YRR+SSGI KY T K DSI +KED
Sbjct: 609 RNSIFAFFDDPRYRRKSSGILKYGTL------------------------KADSIIQKED 644
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+++ KY++KVD+ FFIPEEVHILPESS IMV+N S++G+ T +T NIRS+VG
Sbjct: 645 MIEYRGVQKFKTKYEMKVDRFFFIPEEVHILPESSDIMVQNYSIIGVNTRLTLNIRSQVG 704
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 705 GLIRVERKKKR 715
[100][TOP]
>UniRef100_C0LE64 DNA-directed RNA polymerase n=1 Tax=Jatropha curcas
RepID=C0LE64_9ROSI
Length = 1394
Score = 214 bits (544), Expect = 5e-54
Identities = 112/194 (57%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +Y AI ++ + LAKRRRN+F+IPF QSIQER+ ELM +S+EIP NGIF
Sbjct: 552 CTGHCNLIYSAILYENSDLLAKRRRNKFIIPF--QSIQEREKELMTHSAISIEIPRNGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTI--GIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
NS+FAYFDDPQYRR+SSGITK T IG+HSI +KED
Sbjct: 610 RRNSVFAYFDDPQYRRKSSGITKSGITKYGTIGVHSIVKKED------------------ 651
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYRG+KE PKYQ+KVD+ FFIPEEV+I PESSS+MVRNNS++G+ T I N RS
Sbjct: 652 ---LIEYRGVKEFKPKYQMKVDRFFFIPEEVYIFPESSSLMVRNNSIIGVDTQIALNTRS 708
Query: 50 RVGGLLRLEKKKKK 9
RVGGL+R+E+KKKK
Sbjct: 709 RVGGLVRVERKKKK 722
[101][TOP]
>UniRef100_B9NJ68 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NJ68_POPTR
Length = 279
Score = 214 bits (544), Expect = 5e-54
Identities = 111/186 (59%), Positives = 136/186 (73%)
Frame = -1
Query: 566 FMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSNSIF 387
F+YP I H+ + LAKRR+NRF+IPF QSIQE+ ELM + +EIPINGIF NSIF
Sbjct: 6 FIYPTILHENSDLLAKRRKNRFIIPF--QSIQEK--ELMSHSDILIEIPINGIFRRNSIF 61
Query: 386 AYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFIEYR 207
AYFDDPQYRR+SSGITKY + IG+HSI +KED +EYR
Sbjct: 62 AYFDDPQYRRKSSGITKY---VAIGVHSIVKKED---------------------LVEYR 97
Query: 206 GIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLLRL 27
G+KE PKYQ+KVD+ FFIPEEV+ILPESSS+MVRNNS++G+ T IT N +SRVGGL+R+
Sbjct: 98 GVKEFQPKYQMKVDRFFFIPEEVYILPESSSLMVRNNSIIGVDTQITLNTKSRVGGLIRI 157
Query: 26 EKKKKK 9
E+KKKK
Sbjct: 158 ERKKKK 163
[102][TOP]
>UniRef100_A1XK89 RNA polymerase beta chain (Fragment) n=1 Tax=Saruma henryi
RepID=A1XK89_SARHE
Length = 799
Score = 214 bits (544), Expect = 5e-54
Identities = 110/191 (57%), Positives = 134/191 (70%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H +F+Y AI H+ + LAKRRRNRF+IPF + QE++ EL+P G+S+EIPI GIF
Sbjct: 77 TGHWNFIYSAILHENSDLLAKRRRNRFIIPFQYD--QEQEKELIPRSGISIEIPITGIFR 134
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR SSGITKY T + DSI +KED
Sbjct: 135 KNSILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIVKKED 170
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG KE +PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T I N RSRVG
Sbjct: 171 LIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVNTQIALNTRSRVG 230
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 231 GLVRVERKKKR 241
[103][TOP]
>UniRef100_A1XK34 RNA polymerase beta chain (Fragment) n=1 Tax=Hedyosmum arborescens
RepID=A1XK34_9MAGN
Length = 869
Score = 214 bits (544), Expect = 5e-54
Identities = 112/189 (59%), Positives = 131/189 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+ PAI H+ + L KRRRNRF+IPF + QER+ ELMP G+S+EIPINGI
Sbjct: 109 HWNFVNPAILHENSDLLTKRRRNRFIIPFQYY--QEREKELMPRSGISIEIPINGILRRK 166
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 167 SILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIIKKEDLI 202
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQIKVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RSRVGGL
Sbjct: 203 EYRGTKEFRPKYQIKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNTRSRVGGL 262
Query: 35 LRLEKKKKK 9
+R+EKKKK+
Sbjct: 263 VRVEKKKKR 271
[104][TOP]
>UniRef100_A1XK22 RNA polymerase beta chain (Fragment) n=1 Tax=Akebia quinata
RepID=A1XK22_AKEQU
Length = 861
Score = 214 bits (544), Expect = 5e-54
Identities = 111/192 (57%), Positives = 134/192 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F YPAI H+ + +AKRRRNRF+IPF Q QER+ EL+P G+S+EIPINGIF
Sbjct: 103 CKGHCNFTYPAILHENSDLVAKRRRNRFIIPF--QPNQEREKELIPCSGISIEIPINGIF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR SSGITKY T + DSI +KE
Sbjct: 161 RINSILAYFDDPRYRRNSSGITKYGTI------------------------EVDSIVKKE 196
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEYRG KE K Q+K+D+ FFIPEEVHILP SSSIMVRNNS++G+ T IT NI+SRV
Sbjct: 197 DLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQITLNIKSRV 256
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 257 GGLVRVERKKKR 268
[105][TOP]
>UniRef100_A4GYP8 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Populus
trichocarpa RepID=RPOC2_POPTR
Length = 1390
Score = 214 bits (544), Expect = 5e-54
Identities = 111/186 (59%), Positives = 136/186 (73%)
Frame = -1
Query: 566 FMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSNSIF 387
F+YP I H+ + LAKRR+NRF+IPF QSIQE+ ELM + +EIPINGIF NSIF
Sbjct: 553 FIYPTILHENSDLLAKRRKNRFIIPF--QSIQEK--ELMSHSDILIEIPINGIFRRNSIF 608
Query: 386 AYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFIEYR 207
AYFDDPQYRR+SSGITKY + IG+HSI +KED +EYR
Sbjct: 609 AYFDDPQYRRKSSGITKY---VAIGVHSIVKKED---------------------LVEYR 644
Query: 206 GIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLLRL 27
G+KE PKYQ+KVD+ FFIPEEV+ILPESSS+MVRNNS++G+ T IT N +SRVGGL+R+
Sbjct: 645 GVKEFQPKYQMKVDRFFFIPEEVYILPESSSLMVRNNSIIGVDTQITLNTKSRVGGLIRI 704
Query: 26 EKKKKK 9
E+KKKK
Sbjct: 705 ERKKKK 710
[106][TOP]
>UniRef100_Q14FG7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Populus alba
RepID=RPOC2_POPAL
Length = 1390
Score = 214 bits (544), Expect = 5e-54
Identities = 111/186 (59%), Positives = 136/186 (73%)
Frame = -1
Query: 566 FMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSNSIF 387
F+YP I H+ + LAKRR+NRF+IPF QSIQE+ ELM + +EIPINGIF NSIF
Sbjct: 553 FIYPTILHENSDLLAKRRKNRFIIPF--QSIQEK--ELMSHSDILIEIPINGIFRRNSIF 608
Query: 386 AYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFIEYR 207
AYFDDPQYRR+SSGITKY + IG+HSI +KED +EYR
Sbjct: 609 AYFDDPQYRRKSSGITKY---VAIGVHSIVKKED---------------------LVEYR 644
Query: 206 GIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLLRL 27
G+KE PKYQ+KVD+ FFIPEEV+ILPESSS+MVRNNS++G+ T IT N +SRVGGL+R+
Sbjct: 645 GVKEFQPKYQMKVDRFFFIPEEVYILPESSSLMVRNNSIIGVDTQITLNTKSRVGGLIRI 704
Query: 26 EKKKKK 9
E+KKKK
Sbjct: 705 ERKKKK 710
[107][TOP]
>UniRef100_A4QLS3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Nasturtium
officinale RepID=RPOC2_NASOF
Length = 1379
Score = 214 bits (544), Expect = 5e-54
Identities = 108/191 (56%), Positives = 139/191 (72%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H +F+Y AIFH+ + LAKRRRNRF+IPF QSIQE++ + +P G+S+EIPINGIF
Sbjct: 551 TSHYNFIYSAIFHENSDLLAKRRRNRFIIPF--QSIQEQEKKFIPHSGISIEIPINGIFR 608
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIFA+FDDP+YRR+SSGI KY T K DSI +KED
Sbjct: 609 RNSIFAFFDDPRYRRKSSGILKYGTL------------------------KADSIIQKED 644
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+++ KY++KVD+ FFIPEEVHILPESS+IMV+N S++G+ T IT NIRS+VG
Sbjct: 645 MIEYRGVQKFKTKYEMKVDRFFFIPEEVHILPESSAIMVQNYSIIGVDTRITLNIRSQVG 704
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 705 GLIRVERKKKR 715
[108][TOP]
>UniRef100_A9L986 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lemna minor
RepID=RPOC2_LEMMI
Length = 1366
Score = 214 bits (544), Expect = 5e-54
Identities = 109/188 (57%), Positives = 131/188 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H + YP I H+ +FLAKRRRN+F+IP + QER EL+P +GVS+EIPINGI N
Sbjct: 550 HWNLQYPFILHENSDFLAKRRRNKFIIPLQYD--QERDKELIPHFGVSIEIPINGILRRN 607
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY + DSI +KED I
Sbjct: 608 SILAYFDDPRYRRNSSGITKYGAV------------------------EVDSILKKEDLI 643
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KEL+PKYQ KVD+ FFIPEEVH+LP SS IMVRNNS++G+ TP+T NIRSRVGGL
Sbjct: 644 EYRGTKELSPKYQTKVDRFFFIPEEVHVLPGSSLIMVRNNSIIGVDTPLTLNIRSRVGGL 703
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 704 VRVERKKK 711
[109][TOP]
>UniRef100_A6MMB2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Chloranthus
spicatus RepID=RPOC2_CHLSC
Length = 1389
Score = 214 bits (544), Expect = 5e-54
Identities = 111/189 (58%), Positives = 132/189 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI H+ + LAKRRRNRF+IPF + QER+ ELMP G+S+EIPINGIF
Sbjct: 552 HWNFIYPAILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGIFRRK 609
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YR+ SSGITKY T + DSI +KED I
Sbjct: 610 SILAYFDDPRYRKSSSGITKYGTI------------------------EVDSIVKKEDLI 645
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ+KVD+ FFIPEEVHIL SSSIMVRNNS++G+ T I N RSRVGGL
Sbjct: 646 EYRGAKEFRPKYQMKVDRFFFIPEEVHILTGSSSIMVRNNSIIGVDTRIALNTRSRVGGL 705
Query: 35 LRLEKKKKK 9
+R+EKKKK+
Sbjct: 706 VRVEKKKKR 714
[110][TOP]
>UniRef100_C3UNW2 DNA-directed RNA polymerase n=1 Tax=Megaleranthis saniculifolia
RepID=C3UNW2_9MAGN
Length = 1383
Score = 213 bits (543), Expect = 7e-54
Identities = 114/189 (60%), Positives = 135/189 (71%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI D + LAKRRRNRF+IPF QS QE+ E +P G+S+EIPING+F N
Sbjct: 551 HCNFIYPAILDDNSDLLAKRRRNRFIIPF--QSNQEK--EPIPRSGISIEIPINGLFRRN 606
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR+SSGITKY T + DSI +KED I
Sbjct: 607 SILAYFDDPRYRRKSSGITKYGTI------------------------EVDSIVKKEDLI 642
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYR KE PKYQ+K+D+ FFIPEEVHILP SSSIMVRNNS++G+ T ITFNIRSRVGGL
Sbjct: 643 EYRRTKEFRPKYQMKIDRFFFIPEEVHILPGSSSIMVRNNSIIGVATRITFNIRSRVGGL 702
Query: 35 LRLEKKKKK 9
+R+EKKKKK
Sbjct: 703 VRVEKKKKK 711
[111][TOP]
>UniRef100_A9XWA1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ochna mossambicensis
RepID=A9XWA1_9ROSI
Length = 1268
Score = 213 bits (543), Expect = 7e-54
Identities = 114/191 (59%), Positives = 133/191 (69%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H + +YPAI H+ + LAKRRRNRF+IPF QSIQER ELM G+S+EIPINGIF
Sbjct: 519 TGHCNLIYPAIPHENSDLLAKRRRNRFIIPF--QSIQERAKELMSHSGISIEIPINGIFR 576
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIFAYFDDPQYRR+SSGITKY GIG HSI +KED
Sbjct: 577 RNSIFAYFDDPQYRRRSSGITKYG---GIGAHSIVKKED--------------------- 612
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
+EY +KE PKYQ+KVD FFIPEEV I E SS+MVRNNS++G+ T IT N RSRVG
Sbjct: 613 LVEYGRVKEFKPKYQMKVDHFFFIPEEVFIFSEFSSLMVRNNSIIGVNTQITLNTRSRVG 672
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKKK
Sbjct: 673 GLVRVERKKKK 683
[112][TOP]
>UniRef100_A9XW70 DNA-directed RNA polymerase (Fragment) n=1 Tax=Elaeagnus sp. Nickrent
2898 RepID=A9XW70_9ROSA
Length = 1260
Score = 213 bits (543), Expect = 7e-54
Identities = 112/193 (58%), Positives = 138/193 (71%), Gaps = 2/193 (1%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQER--KNELMPPYGVSVEIPINGI 408
T HS+ ++P+I H + LAKRRRNRF+IPF Q IQER + E+MP +S+EIPINGI
Sbjct: 523 TGHSNLLFPSILHKNSDLLAKRRRNRFIIPF--QWIQERGTEMEIMPCSNISIEIPINGI 580
Query: 407 FHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEK 228
F NSI AYFDDPQYRR+SSGI KY T IG+HSI +K D
Sbjct: 581 FRRNSILAYFDDPQYRRESSGIAKYGT---IGLHSILKKVD------------------- 618
Query: 227 EDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSR 48
IEYRG+KE PK+Q+K+D+ FFIPEEVHILPES+S+MVRNNS++G+ T IT N RSR
Sbjct: 619 --LIEYRGVKEFTPKHQMKIDRFFFIPEEVHILPESASVMVRNNSIIGVDTQITLNTRSR 676
Query: 47 VGGLLRLEKKKKK 9
VGGL+R+E+KKKK
Sbjct: 677 VGGLVRVERKKKK 689
[113][TOP]
>UniRef100_A6YAK2 RNA polymerase beta' subunit (Fragment) n=1 Tax=Corylopsis
pauciflora RepID=A6YAK2_9MAGN
Length = 821
Score = 213 bits (543), Expect = 7e-54
Identities = 116/193 (60%), Positives = 134/193 (69%), Gaps = 2/193 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMP--PYGVSVEIPING 411
CT H + +Y AI + LAKRRRNRF+IPF Q IQER+ E MP G+S+EIPING
Sbjct: 82 CTGHCNLIYXAILRENSYLLAKRRRNRFIIPF--QPIQEREKEQMPHSDSGISIEIPING 139
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDDP+YRR SSGITKY T I +HSI +KED
Sbjct: 140 IFRRNSILAYFDDPRYRRNSSGITKYGT---IEVHSIVKKED------------------ 178
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RS
Sbjct: 179 ---LIEYRGVKEFKPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNTRS 235
Query: 50 RVGGLLRLEKKKK 12
RVGGL+R+EKKKK
Sbjct: 236 RVGGLVRVEKKKK 248
[114][TOP]
>UniRef100_A1XK41 RNA polymerase beta chain (Fragment) n=1 Tax=Liriodendron chinense
RepID=A1XK41_LIRCH
Length = 839
Score = 213 bits (543), Expect = 7e-54
Identities = 110/189 (58%), Positives = 132/189 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI H+ + LAKRRRNRF+IPF + QER+ ELMP G+S+EIPINGI +
Sbjct: 86 HWNFLYPAILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILRRD 143
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
+I AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 144 TILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIVKKEDLI 179
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+ T I N RSRVGGL
Sbjct: 180 EYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIALNTRSRVGGL 239
Query: 35 LRLEKKKKK 9
+R+E+KKKK
Sbjct: 240 VRVERKKKK 248
[115][TOP]
>UniRef100_A1XK08 RNA polymerase beta chain (Fragment) n=1 Tax=Gunnera monoica
RepID=A1XK08_9MAGN
Length = 866
Score = 213 bits (543), Expect = 7e-54
Identities = 114/191 (59%), Positives = 133/191 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H +F+YPAI H+ F LAKRRRNRF+IPF QSIQER+ ELM +S+EIPINGI
Sbjct: 103 CTGHCNFIYPAILHENFYLLAKRRRNRFIIPF--QSIQEREKELMSRSVISIEIPINGIL 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDD +YRR SGITKY T I +HSI +KED
Sbjct: 161 RRNSILAYFDDFRYRRTGSGITKYET---IEMHSIIKKED-------------------- 197
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ+KVD+ FFIPEEVH LP SS +MVRNNS++G+ T IT N RSRV
Sbjct: 198 -LIEYRGVKEFWPKYQMKVDRFFFIPEEVHTLPGSSYVMVRNNSIIGVDTQITLNTRSRV 256
Query: 44 GGLLRLEKKKK 12
GGL+R+EKKKK
Sbjct: 257 GGLVRVEKKKK 267
[116][TOP]
>UniRef100_Q0G9M9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Liriodendron
tulipifera RepID=RPOC2_LIRTU
Length = 1382
Score = 213 bits (543), Expect = 7e-54
Identities = 110/189 (58%), Positives = 132/189 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI H+ + LAKRRRNRF+IPF + QER+ ELMP G+S+EIPINGI +
Sbjct: 554 HWNFLYPAILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILRRD 611
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
+I AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 612 TILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIVKKEDLI 647
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+ T I N RSRVGGL
Sbjct: 648 EYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIALNTRSRVGGL 707
Query: 35 LRLEKKKKK 9
+R+E+KKKK
Sbjct: 708 VRVERKKKK 716
[117][TOP]
>UniRef100_UPI0001985CBF PREDICTED: similar to RNA polymerase beta subunit, partial n=1
Tax=Vitis vinifera RepID=UPI0001985CBF
Length = 650
Score = 213 bits (542), Expect = 9e-54
Identities = 111/191 (58%), Positives = 134/191 (70%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T + + PAI H+ + LAKRRRNRF+IPF QSIQE + ELMPP G+S+EIPINGIF
Sbjct: 79 TGRYNLIDPAILHENSDLLAKRRRNRFIIPF--QSIQEGEKELMPPSGISIEIPINGIFR 136
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR SSGITKY T + SI +KED
Sbjct: 137 RNSILAYFDDPRYRRNSSGITKYGTI------------------------EAHSIVKKED 172
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+KE PKYQ+KVD+ FFIPEEVHILP S+SIM+RNNS++G+ T IT N RSRV
Sbjct: 173 LIEYRGVKEFKPKYQMKVDRFFFIPEEVHILPGSASIMLRNNSIIGVDTRITLNTRSRVS 232
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 233 GLVRVERKKKR 243
[118][TOP]
>UniRef100_A9XWB3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Schinus
terebinthifolius RepID=A9XWB3_9ROSI
Length = 1281
Score = 213 bits (542), Expect = 9e-54
Identities = 110/191 (57%), Positives = 139/191 (72%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T + ++PAIFH + LAKRRRNRFLIPF QSIQE++ EL+P G+S++IPI GIF
Sbjct: 520 TGPCNLLHPAIFHKHSDLLAKRRRNRFLIPF--QSIQEQEKELLPLSGISIDIPIKGIFR 577
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR+SSGITKY T IG HSI +KED
Sbjct: 578 RNSILAYFDDPRYRRKSSGITKYGT---IGAHSIVKKED--------------------- 613
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+K++ PKYQ+K+D+ FFIPEEV+ LPESS +MVRNNS++G+ TPIT IRS+VG
Sbjct: 614 LIEYRGVKKIKPKYQMKIDRFFFIPEEVYTLPESSYVMVRNNSIIGVDTPITLTIRSQVG 673
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 674 GLVRVERKKKR 684
[119][TOP]
>UniRef100_A9XW90 DNA-directed RNA polymerase (Fragment) n=1 Tax=Krameria lanceolata
RepID=A9XW90_9ROSI
Length = 1027
Score = 213 bits (542), Expect = 9e-54
Identities = 112/190 (58%), Positives = 133/190 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H + +Y AI H+ + LAKRRR RF+IPF QSI ER ELM G+S+EIP NGIF
Sbjct: 518 CIGHCNLIYSAIIHENSHLLAKRRRKRFIIPF--QSIPERDKELMTRSGISIEIPPNGIF 575
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDPQYRR+SSGI+KY TIG+ SI +KE
Sbjct: 576 CRNSILAYFDDPQYRRKSSGISKYGATIGV-----------------------HSIVKKE 612
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D+IEYRG+KE PKYQ++VD+ FFIPEEV+ILPESSSIMVRNNSL+G+ T I FN RSRV
Sbjct: 613 DWIEYRGVKEFQPKYQMEVDKFFFIPEEVYILPESSSIMVRNNSLIGVNTRIAFNKRSRV 672
Query: 44 GGLLRLEKKK 15
GG +R+EKKK
Sbjct: 673 GGFVRVEKKK 682
[120][TOP]
>UniRef100_A9XW57 DNA-directed RNA polymerase (Fragment) n=1 Tax=Carica papaya
RepID=A9XW57_CARPA
Length = 1163
Score = 213 bits (542), Expect = 9e-54
Identities = 113/190 (59%), Positives = 137/190 (72%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H + +Y A H+ + LAKRRRNRF+IPF QSIQE++ ELMP G+S+EIPINGIF
Sbjct: 523 TGHCNLIYFASLHENSDLLAKRRRNRFIIPF--QSIQEQEKELMPRSGISIEIPINGIFR 580
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI A+FDDP+YRR+SSGI KY T IG HSI +KED
Sbjct: 581 RNSILAFFDDPRYRRKSSGILKYGT---IGAHSIVKKED--------------------- 616
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+K+ KYQ+KVD+ FFIPEEVHILPESSSIMVRNNS++G+ T IT NIRS+VG
Sbjct: 617 VIEYRGVKKFKTKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTRITLNIRSQVG 676
Query: 41 GLLRLEKKKK 12
GL+R+E+KKK
Sbjct: 677 GLVRVERKKK 686
[121][TOP]
>UniRef100_A9XW53 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bursera simaruba
RepID=A9XW53_9ROSI
Length = 1274
Score = 213 bits (542), Expect = 9e-54
Identities = 111/190 (58%), Positives = 137/190 (72%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H + ++PAI + LAKRRRNRFLIPF QSIQE++ ELMPP G+S+EIPI GIF
Sbjct: 522 TGHCNCIHPAILDKNSDLLAKRRRNRFLIPF--QSIQEQEKELMPPSGISIEIPIKGIFR 579
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR+SSGITKY T IG HSI +KED
Sbjct: 580 RNSILAYFDDPRYRRKSSGITKYGT---IGAHSIVKKED--------------------- 615
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+K++ PK+Q K+D FFIPEEV+ LPESSS+MVRNNS++G+ T IT NIRS+VG
Sbjct: 616 LIEYRGVKKIKPKHQTKIDHFFFIPEEVYTLPESSSVMVRNNSIIGVDTRITLNIRSQVG 675
Query: 41 GLLRLEKKKK 12
GL+R+E+KK+
Sbjct: 676 GLVRVERKKR 685
[122][TOP]
>UniRef100_A1XKE3 RNA polymerase beta chain (Fragment) n=1 Tax=Chloranthus
multistachys RepID=A1XKE3_CHLMT
Length = 827
Score = 213 bits (542), Expect = 9e-54
Identities = 111/189 (58%), Positives = 131/189 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI HD + LAKRRRNRF+IPF + QER+ ELMP G+S+EIPINGI
Sbjct: 82 HWNFIYPAILHDNSDLLAKRRRNRFIIPFQYD--QEREKELMPRSGISIEIPINGILRRK 139
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 140 SILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIVKKEDLI 175
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ+KVD+ FFIPEEVHIL SSSIMVRNNS++G+ T I N RSRVGGL
Sbjct: 176 EYRGAKEFRPKYQMKVDRFFFIPEEVHILTGSSSIMVRNNSIIGVDTRIALNTRSRVGGL 235
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 236 VRVERKKKR 244
[123][TOP]
>UniRef100_A1XK56 RNA polymerase beta chain (Fragment) n=1 Tax=Orontium aquaticum
RepID=A1XK56_OROAQ
Length = 835
Score = 213 bits (542), Expect = 9e-54
Identities = 109/188 (57%), Positives = 132/188 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H + +YP+I + +FLAKRRRNRF+IP F QER+ EL+ +G+S+EIPINGI N
Sbjct: 83 HWNCIYPSILRENSDFLAKRRRNRFIIPLQFD--QEREKELISRFGISIEIPINGILRKN 140
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
I AYFDDPQYRR SSGITKY T + DSI +KED I
Sbjct: 141 GILAYFDDPQYRRSSSGITKYGTV------------------------EVDSIVKKEDLI 176
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE +PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ TP+T N RSRVGGL
Sbjct: 177 EYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTPLTLNTRSRVGGL 236
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 237 VRVERKKK 244
[124][TOP]
>UniRef100_A1XK30 RNA polymerase beta chain (Fragment) n=1 Tax=Acorus calamus
RepID=A1XK30_ACOCL
Length = 838
Score = 213 bits (542), Expect = 9e-54
Identities = 111/188 (59%), Positives = 134/188 (71%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP+I H+ +FLAKRR+NRF+IPF + QE + EL+P G+S+EIPINGI N
Sbjct: 82 HWNFIYPSILHENSDFLAKRRKNRFIIPFQYD--QEGEKELIPHSGISIEIPINGILRRN 139
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDD +YRR SSGITKY T + DSI +KEDFI
Sbjct: 140 SILAYFDDTRYRRSSSGITKYGTV------------------------EIDSIVKKEDFI 175
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE + KYQ+KVD+ FFIPEEVHILP SSSIMVRNNSL+G+ T IT NIRSRVGGL
Sbjct: 176 EYRGTKEFSSKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSLIGVDTRITLNIRSRVGGL 235
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 236 VRVERKKK 243
[125][TOP]
>UniRef100_A1XK16 RNA polymerase beta chain (Fragment) n=1 Tax=Platanus occidentalis
RepID=A1XK16_PLAOC
Length = 863
Score = 213 bits (542), Expect = 9e-54
Identities = 112/192 (58%), Positives = 135/192 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YP+I H+ + LAKRRRNRF+IPF QS QER+ ELM +S+EIPINGIF
Sbjct: 103 CNGHCNFIYPSILHENSDLLAKRRRNRFIIPF--QSNQEREKELMSRSDISIEIPINGIF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR +SGITKY T I +H+I +KED
Sbjct: 161 RRNSILAYFDDPRYRRNNSGITKYGT---IEVHAIVKKED-------------------- 197
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYR KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RSRV
Sbjct: 198 -LIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNARSRV 256
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 257 GGLVRVERKKKR 268
[126][TOP]
>UniRef100_Q9THV5 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Sinapis alba
RepID=RPOC2_SINAL
Length = 1384
Score = 213 bits (542), Expect = 9e-54
Identities = 108/191 (56%), Positives = 135/191 (70%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H +F+Y AIFH+ + LAKRRRNRFLIPF QE++ E +P G+SVEIPINGIF
Sbjct: 554 TSHYNFIYSAIFHENSDLLAKRRRNRFLIPFQSIQEQEQEKEFIPHSGISVEIPINGIFR 613
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIFA+FDDP+YRR+SSGI KY T K DSI +KED
Sbjct: 614 RNSIFAFFDDPRYRRKSSGILKYGTL------------------------KADSIIQKED 649
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+++ KY++KVD+ FFIPEEVHILPESS+IMV N S++G+ T IT NIRS+VG
Sbjct: 650 MIEYRGVQKFKTKYEMKVDRFFFIPEEVHILPESSAIMVENYSIIGVDTRITLNIRSQVG 709
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 710 GLIRVERKKKR 720
[127][TOP]
>UniRef100_Q09G56 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Platanus
occidentalis RepID=RPOC2_PLAOC
Length = 1387
Score = 213 bits (542), Expect = 9e-54
Identities = 112/192 (58%), Positives = 135/192 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YP+I H+ + LAKRRRNRF+IPF QS QER+ ELM +S+EIPINGIF
Sbjct: 552 CNGHCNFIYPSILHENSDLLAKRRRNRFIIPF--QSNQEREKELMSRSDISIEIPINGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR +SGITKY T I +H+I +KED
Sbjct: 610 RRNSILAYFDDPRYRRNNSGITKYGT---IEVHAIVKKED-------------------- 646
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYR KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RSRV
Sbjct: 647 -LIEYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNARSRV 705
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 706 GGLVRVERKKKR 717
[128][TOP]
>UniRef100_B1A925 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Carica papaya
RepID=RPOC2_CARPA
Length = 1387
Score = 213 bits (542), Expect = 9e-54
Identities = 113/190 (59%), Positives = 137/190 (72%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H + +Y A H+ + LAKRRRNRF+IPF QSIQE++ ELMP G+S+EIPINGIF
Sbjct: 549 TGHCNLIYFASLHENSDLLAKRRRNRFIIPF--QSIQEQEKELMPRSGISIEIPINGIFR 606
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI A+FDDP+YRR+SSGI KY T IG HSI +KED
Sbjct: 607 RNSILAFFDDPRYRRKSSGILKYGT---IGAHSIVKKED--------------------- 642
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+K+ KYQ+KVD+ FFIPEEVHILPESSSIMVRNNS++G+ T IT NIRS+VG
Sbjct: 643 VIEYRGVKKFKTKYQMKVDRFFFIPEEVHILPESSSIMVRNNSIIGVDTRITLNIRSQVG 702
Query: 41 GLLRLEKKKK 12
GL+R+E+KKK
Sbjct: 703 GLVRVERKKK 712
[129][TOP]
>UniRef100_A6YAK5 RNA polymerase beta' subunit (Fragment) n=1 Tax=Exbucklandia
populnea RepID=A6YAK5_9MAGN
Length = 802
Score = 213 bits (541), Expect = 1e-53
Identities = 113/193 (58%), Positives = 136/193 (70%), Gaps = 2/193 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMP--PYGVSVEIPING 411
CT H + +YPAI + + LAKRRRNRF+IPF QSIQER+ E MP G+S+EIPING
Sbjct: 62 CTGHCNLIYPAILRENSDLLAKRRRNRFIIPF--QSIQEREKEQMPHSDSGISIEIPING 119
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDDP+YRR SSGITKY T I +HSI +K+D
Sbjct: 120 IFRRNSILAYFDDPRYRRNSSGITKYGT---IEVHSIVKKQD------------------ 158
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYRG+KE P+YQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+ T IT N RS
Sbjct: 159 ---LIEYRGVKEFKPRYQMKVDRFFFIPEEVHILPGSSFIMVRNNSIIGVDTRITLNTRS 215
Query: 50 RVGGLLRLEKKKK 12
RVGGL+R+E+KK+
Sbjct: 216 RVGGLVRVERKKR 228
[130][TOP]
>UniRef100_A1XKC2 RNA polymerase beta chain (Fragment) n=1 Tax=Austrobaileya scandens
RepID=A1XKC2_9MAGN
Length = 835
Score = 213 bits (541), Expect = 1e-53
Identities = 110/189 (58%), Positives = 132/189 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H F+YPAI H+ N LAKRRRNRF+IPF Q QER+ EL P G+++EIPINGI N
Sbjct: 82 HWDFIYPAILHENSNLLAKRRRNRFIIPF--QHDQEREKELTPRSGIAIEIPINGILRIN 139
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 140 SILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIVKKEDLI 175
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KEL PKYQ+KVD+ FFIPEEVHILP SS+IMVRNNS++G+ T I N +SR+GGL
Sbjct: 176 EYRGAKELRPKYQMKVDRFFFIPEEVHILPGSSTIMVRNNSIIGVDTQIALNTKSRIGGL 235
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 236 VRVERKKKR 244
[131][TOP]
>UniRef100_A1XK25 RNA polymerase beta chain (Fragment) n=1 Tax=Xanthosoma mafaffa
RepID=A1XK25_XANMF
Length = 843
Score = 213 bits (541), Expect = 1e-53
Identities = 108/188 (57%), Positives = 131/188 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F YP+I H+ +FLAKRRRNR +IP + QER+ EL+P +GVS+EIPINGI
Sbjct: 89 HWNFKYPSILHENSDFLAKRRRNRLIIPLQYD--QEREKELIPRFGVSIEIPINGILRRK 146
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 147 SILAYFDDPRYRRNSSGITKYGTV------------------------EVDSIVKKEDLI 182
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ+KVD+ FFIPEEVH+LP SS IMVRNNS++G+ TP+T N RSRVGGL
Sbjct: 183 EYRGAKEFRPKYQMKVDRFFFIPEEVHVLPGSSLIMVRNNSIIGVDTPLTLNTRSRVGGL 242
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 243 VRVERKKK 250
[132][TOP]
>UniRef100_A6YAJ8 RNA polymerase beta' subunit (Fragment) n=1 Tax=Altingia excelsa
RepID=A6YAJ8_9MAGN
Length = 840
Score = 212 bits (540), Expect = 2e-53
Identities = 114/194 (58%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPY--GVSVEIPING 411
C+ H + +YPAI + + LAKRRRNRF+IPF QSIQER+ E MP G+S+EIPING
Sbjct: 100 CSGHCNLIYPAILRENSDLLAKRRRNRFIIPF--QSIQEREKEQMPHSNSGISIEIPING 157
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDDP+YRR+SSGITKY T I +HSI +KED
Sbjct: 158 IFRRNSILAYFDDPRYRRKSSGITKYGT---IEVHSIVKKED------------------ 196
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IE RG+KE P+YQ+KVD FFIPEEVHILP SSSIMVRNNS++G+ T IT N RS
Sbjct: 197 ---LIECRGVKEFKPRYQMKVDLFFFIPEEVHILPGSSSIMVRNNSIIGVDTQITLNTRS 253
Query: 50 RVGGLLRLEKKKKK 9
RVGGL+R+E+KKK+
Sbjct: 254 RVGGLVRVERKKKR 267
[133][TOP]
>UniRef100_A9XW93 DNA-directed RNA polymerase n=1 Tax=Liquidambar styraciflua
RepID=A9XW93_LIQST
Length = 1390
Score = 212 bits (539), Expect = 2e-53
Identities = 113/194 (58%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPY--GVSVEIPING 411
C+ H + +YPAI + + LAKRRRNRF+IPF QSIQER+ E MP G+S+EIPING
Sbjct: 552 CSGHCNLIYPAILRENSDLLAKRRRNRFIIPF--QSIQEREKEQMPHSNSGISIEIPING 609
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDDP+YRR+SSGITKY T I +HSI +KED
Sbjct: 610 IFRRNSILAYFDDPRYRRKSSGITKYGT---IEVHSIVKKED------------------ 648
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IE RG+KE P+YQ+KVD+ FFIPEE HILP SSSIMVRNNS++G+ T IT N RS
Sbjct: 649 ---LIECRGVKEFKPRYQMKVDRFFFIPEEAHILPGSSSIMVRNNSIIGVDTQITLNTRS 705
Query: 50 RVGGLLRLEKKKKK 9
RVGGL+R+E+KKK+
Sbjct: 706 RVGGLVRVERKKKR 719
[134][TOP]
>UniRef100_A6YAL1 RNA polymerase beta' subunit (Fragment) n=1 Tax=Liquidambar
styraciflua RepID=A6YAL1_LIQST
Length = 830
Score = 212 bits (539), Expect = 2e-53
Identities = 113/194 (58%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPY--GVSVEIPING 411
C+ H + +YPAI + + LAKRRRNRF+IPF QSIQER+ E MP G+S+EIPING
Sbjct: 85 CSGHCNLIYPAILRENSDLLAKRRRNRFIIPF--QSIQEREKEQMPHSNSGISIEIPING 142
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDDP+YRR+SSGITKY T I +HSI +KED
Sbjct: 143 IFRRNSILAYFDDPRYRRKSSGITKYGT---IEVHSIVKKED------------------ 181
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IE RG+KE P+YQ+KVD+ FFIPEE HILP SSSIMVRNNS++G+ T IT N RS
Sbjct: 182 ---LIECRGVKEFKPRYQMKVDRFFFIPEEAHILPGSSSIMVRNNSIIGVDTQITLNTRS 238
Query: 50 RVGGLLRLEKKKKK 9
RVGGL+R+E+KKK+
Sbjct: 239 RVGGLVRVERKKKR 252
[135][TOP]
>UniRef100_Q3V544 DNA-directed RNA polymerase subunit beta'' n=3 Tax=Acorus
RepID=RPOC2_ACOCL
Length = 1386
Score = 212 bits (539), Expect = 2e-53
Identities = 110/188 (58%), Positives = 134/188 (71%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP+I H+ +FLAKRR+NRF+IPF + QE + EL+P G+S+EIPING+ N
Sbjct: 554 HWNFIYPSILHENSDFLAKRRKNRFIIPFQYD--QEGEKELIPHSGISIEIPINGMLRRN 611
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDD +YRR SSGITKY T + DSI +KEDFI
Sbjct: 612 SILAYFDDTRYRRSSSGITKYGTV------------------------EIDSIVKKEDFI 647
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE + KYQ+KVD+ FFIPEEVHILP SSSIMVRNNSL+G+ T IT NIRSRVGGL
Sbjct: 648 EYRGTKEFSSKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSLIGVDTRITLNIRSRVGGL 707
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 708 VRVERKKK 715
[136][TOP]
>UniRef100_A9XWA0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nitraria retusa
RepID=A9XWA0_9ROSI
Length = 1272
Score = 211 bits (538), Expect = 3e-53
Identities = 110/193 (56%), Positives = 140/193 (72%), Gaps = 2/193 (1%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNF--LAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGI 408
T + + +YPAI H+ +F LAKRRRNRFLIP QS QE++ ELMP G+++EIPI GI
Sbjct: 508 TGYCNLIYPAILHENSDFYLLAKRRRNRFLIPL--QSSQEQEKELMPHSGIAMEIPIKGI 565
Query: 407 FHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEK 228
FH NSI AYFDDP+YRR+ SG+TKY T IG HSI +K+D
Sbjct: 566 FHRNSILAYFDDPRYRRKGSGMTKYGT---IGAHSIVKKDD------------------- 603
Query: 227 EDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSR 48
IEYRG+K++ PKYQ+K+D+ FFIPEEVHILPESS +MVRNNS++G+ T IT NIRS+
Sbjct: 604 --LIEYRGVKKIKPKYQMKIDRFFFIPEEVHILPESSYVMVRNNSIIGVDTRITLNIRSQ 661
Query: 47 VGGLLRLEKKKKK 9
VGGL+R+E+KKK+
Sbjct: 662 VGGLVRVERKKKR 674
[137][TOP]
>UniRef100_A9XW59 DNA-directed RNA polymerase (Fragment) n=1 Tax=Celtis occidentalis
RepID=A9XW59_9ROSA
Length = 1259
Score = 211 bits (538), Expect = 3e-53
Identities = 115/191 (60%), Positives = 136/191 (71%), Gaps = 2/191 (1%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNF--LAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
H + + +I H+ +F LAKRRRNRF+IPF + IQER+ EL+P +S+EIPINGIF
Sbjct: 520 HWNLILTSILHNNSDFFLLAKRRRNRFIIPFKW--IQEREKELIPRSNISIEIPINGIFR 577
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDPQYRR+SSGITKY IG+HSI +KED
Sbjct: 578 RNSILAYFDDPQYRRKSSGITKYGA---IGLHSILKKED--------------------- 613
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEY G+KEL PKYQ KVD+ FFIPEEVHILPESSSIMVRNNS++GI T IT N RSRVG
Sbjct: 614 LIEYVGVKELKPKYQTKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTQITLNTRSRVG 673
Query: 41 GLLRLEKKKKK 9
GL+R+EKKKK+
Sbjct: 674 GLVRVEKKKKR 684
[138][TOP]
>UniRef100_A9XW56 DNA-directed RNA polymerase (Fragment) n=1 Tax=Capparis flexuosa
RepID=A9XW56_CAPFL
Length = 1263
Score = 211 bits (538), Expect = 3e-53
Identities = 109/191 (57%), Positives = 137/191 (71%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T HS+ +Y AIFH+ + LAKRRRNRFLIPF QSIQE++ E + G+S+EIPINGIF
Sbjct: 518 TSHSNLIYSAIFHENSDLLAKRRRNRFLIPF--QSIQEQEKEFISHSGISIEIPINGIFR 575
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIFA+FDDP+YRR++SGI KY T + SI +KED
Sbjct: 576 KNSIFAFFDDPRYRRKNSGILKYGTI------------------------EAKSIIQKED 611
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+K+ KYQ+KVD+ FFIPEEVHILPESSSIMV+N S++G+ T IT NIRS+VG
Sbjct: 612 MIEYRGVKKFKKKYQMKVDRFFFIPEEVHILPESSSIMVQNYSIIGVDTRITLNIRSQVG 671
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 672 GLVRVERKKKR 682
[139][TOP]
>UniRef100_A1XKE5 RNA polymerase beta chain (Fragment) n=1 Tax=Cissampelos pareira
RepID=A1XKE5_9MAGN
Length = 774
Score = 211 bits (538), Expect = 3e-53
Identities = 112/192 (58%), Positives = 135/192 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C +F+YPAI H + LAKRRRNRF+IPF +S QE++ E++P G+S+EIPINGIF
Sbjct: 17 CKGRCNFIYPAILHGDSDLLAKRRRNRFIIPF--RSNQEQEEEIIPRSGISMEIPINGIF 74
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR SSGITKY T G+HSI +K+
Sbjct: 75 RRNSILAYFDDPRYRRNSSGITKYGTR---GVHSIVKKQY-------------------- 111
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG KE KYQ+K+D+ FFIPEEVHILP SSSIMVRNNS++G+ T ITFN RSRV
Sbjct: 112 -LIEYRGTKEFRSKYQMKIDRFFFIPEEVHILPGSSSIMVRNNSIIGMDTQITFNTRSRV 170
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKKK
Sbjct: 171 GGLVRVEKKKKK 182
[140][TOP]
>UniRef100_A1XKC1 RNA polymerase beta chain (Fragment) n=1 Tax=Schisandra
sphenanthera RepID=A1XKC1_SCHSP
Length = 816
Score = 211 bits (538), Expect = 3e-53
Identities = 110/188 (58%), Positives = 131/188 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H F YPAI HD NFLAKRRRNRF+I +FQ QER+ EL P G++++IPINGI N
Sbjct: 59 HWDFRYPAILHDNSNFLAKRRRNRFII--AFQHAQEREKELSPRSGIAIQIPINGILRRN 116
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +K+D I
Sbjct: 117 SILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIVKKDDLI 152
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KEL PKYQ+KV++ FFIPEEVHILP SS IMVRNNS++G+ T IT N RSR+GGL
Sbjct: 153 EYRGAKELRPKYQMKVNRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRITLNTRSRIGGL 212
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 213 VRVERKKK 220
[141][TOP]
>UniRef100_A1XK65 RNA polymerase beta chain (Fragment) n=1 Tax=Lardizabala biternata
RepID=A1XK65_9MAGN
Length = 861
Score = 211 bits (538), Expect = 3e-53
Identities = 110/192 (57%), Positives = 133/192 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F YPAI H+ +AKRRRNRF+IPF Q QER+ EL+P G+S+EIPINGIF
Sbjct: 103 CNGHCNFTYPAILHENSYLVAKRRRNRFIIPF--QPNQEREKELIPCSGISIEIPINGIF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR SSGITKY T + DSI +KE
Sbjct: 161 RRNSILAYFDDPRYRRNSSGITKYGTI------------------------EVDSIVKKE 196
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEYRG KE K Q+K+D+ FFIPEEVHILP SSSIMVR+NS++G+ T IT NI+SRV
Sbjct: 197 DLIEYRGTKEFRSKDQLKIDRFFFIPEEVHILPGSSSIMVRDNSIIGVDTQITLNIKSRV 256
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 257 GGLVRVERKKKR 268
[142][TOP]
>UniRef100_A1XK20 RNA polymerase beta chain (Fragment) n=1 Tax=Ranunculus sp. Qiu
95024 RepID=A1XK20_9MAGN
Length = 862
Score = 211 bits (538), Expect = 3e-53
Identities = 110/192 (57%), Positives = 133/192 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H + +YPAI + + LAKRRRNRF IP QS QE++ E P G+S+EIPING+F
Sbjct: 103 CNGHCNLIYPAILDENSDLLAKRRRNRFTIPL--QSNQEQEKEQKPHSGISIEIPINGLF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYF+DP+YRR+SSGITKY T + DSI +KE
Sbjct: 161 RINSILAYFEDPRYRRKSSGITKYGTL------------------------EVDSIVKKE 196
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEYR KE PKYQ+K+D+ FFIPEEVHILP SSSIM+RNNS++G+ T ITFNIRSRV
Sbjct: 197 DLIEYRRTKEFRPKYQMKIDRFFFIPEEVHILPGSSSIMIRNNSIIGVDTQITFNIRSRV 256
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKKK
Sbjct: 257 GGLVRVEKKKKK 268
[143][TOP]
>UniRef100_Q8S8Y1 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Atropa belladonna
RepID=RPOC2_ATRBE
Length = 1389
Score = 211 bits (538), Expect = 3e-53
Identities = 108/192 (56%), Positives = 134/192 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT + +Y I H+ + L+KRRRN+F+IP SIQE +NELMP G+S+EIP+NGIF
Sbjct: 552 CTGQYNLVYSPILHENSDLLSKRRRNKFIIPL--HSIQELENELMPCSGISIEIPVNGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+SSGI KY T + S+ +KE
Sbjct: 610 RRNSILAYFDDPRYRRKSSGIIKYGTI------------------------ETHSVIKKE 645
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS+VG+ T IT N+RSRV
Sbjct: 646 DLIEYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIVGVDTQITLNLRSRV 705
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 706 GGLVRVERKKKR 717
[144][TOP]
>UniRef100_A9XW51 DNA-directed RNA polymerase (Fragment) n=1 Tax=Brexia
madagascariensis RepID=A9XW51_BREMA
Length = 1268
Score = 211 bits (537), Expect = 3e-53
Identities = 109/192 (56%), Positives = 135/192 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YP I H++ + LAKRRRNRF+IPF QSI ER+ ELM P +S+EIPINGIF
Sbjct: 517 CTGHCNLIYPPILHESSDLLAKRRRNRFIIPF--QSIPEREKELMSPADISIEIPINGIF 574
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
S+F+YFDD +YRR+ SGITKY T IG+HSI +KED
Sbjct: 575 RRKSLFSYFDDLKYRRKCSGITKYGT---IGVHSILKKED-------------------- 611
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKY++K+D+ FFIPEEVHILPESS IMVRNNS++ + T I N RSRV
Sbjct: 612 -LIEYRGVKEFKPKYKMKIDRFFFIPEEVHILPESSYIMVRNNSIIRVDTRIALNTRSRV 670
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKK K+
Sbjct: 671 GGLVRVEKKTKE 682
[145][TOP]
>UniRef100_A1XKF6 RNA polymerase beta chain (Fragment) n=1 Tax=Gyrocarpus americanus
RepID=A1XKF6_9MAGN
Length = 712
Score = 211 bits (537), Expect = 3e-53
Identities = 115/192 (59%), Positives = 134/192 (69%), Gaps = 2/192 (1%)
Frame = -1
Query: 578 DHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHS 399
DH +F+YPAI H + LAKRRRNRF IPF QS Q+R+ ELMP +G+S+EIPINGI
Sbjct: 5 DHWNFIYPAILHKNSDLLAKRRRNRFTIPF--QSDQKREKELMPRFGISIEIPINGILRR 62
Query: 398 NSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDF 219
NSI AYFDDP+YRR SSGITKY T IG+G SI +KED
Sbjct: 63 NSILAYFDDPRYRRSSSGITKYGT-IGVG-----------------------SIVKKEDL 98
Query: 218 IEYRGIKELNPKYQI--KVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYR KE PKYQ+ KVD+ FFIPEEVHILP SS I+VRNNS++GI T IT N RSR
Sbjct: 99 IEYRRAKEFRPKYQMQMKVDRFFFIPEEVHILPGSSPILVRNNSIIGIDTQITLNTRSRA 158
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKK+
Sbjct: 159 GGLVRVEKKKKR 170
[146][TOP]
>UniRef100_A1XK33 RNA polymerase beta chain (Fragment) n=1 Tax=Sarcandra
chloranthoides RepID=A1XK33_9MAGN
Length = 849
Score = 211 bits (537), Expect = 3e-53
Identities = 110/189 (58%), Positives = 131/189 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI H+ + LAKRRRNRF+IPF + QER+ ELMP +S+EIPINGI
Sbjct: 89 HWNFIYPAILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPRSVISIEIPINGILRRK 146
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 147 SILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIVKKEDLI 182
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T I N RSRVGGL
Sbjct: 183 EYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRIALNTRSRVGGL 242
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 243 VRVERKKKR 251
[147][TOP]
>UniRef100_A4QJS3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Olimarabidopsis
pumila RepID=RPOC2_OLIPU
Length = 1379
Score = 211 bits (537), Expect = 3e-53
Identities = 107/191 (56%), Positives = 137/191 (71%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H +F+Y AIFH+ + LAKRRRNRFLIPF QSIQE++ E +P G+S+EIPINGIF
Sbjct: 551 TSHYNFIYSAIFHENSDLLAKRRRNRFLIPF--QSIQEQEKEFIPHSGISIEIPINGIFR 608
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIFA+FDDP+YRR+SSGI KY T K DSI +K D
Sbjct: 609 RNSIFAFFDDPRYRRKSSGILKYGTP------------------------KADSIIQKAD 644
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+++ KY++KVD+ FFIPEEVHILPESS+IMV+N S++G+ T + NIRS+VG
Sbjct: 645 MIEYRGVQKFKTKYEMKVDRFFFIPEEVHILPESSAIMVQNYSIIGVDTRLALNIRSQVG 704
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 705 GLIRVERKKKR 715
[148][TOP]
>UniRef100_A9XWA9 DNA-directed RNA polymerase n=1 Tax=Quercus nigra RepID=A9XWA9_9ROSI
Length = 1396
Score = 211 bits (536), Expect = 4e-53
Identities = 111/188 (59%), Positives = 131/188 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H + +YP I ++ F LAKRRRNRF+IP Q I ER+ LMPP GVS+EIP NGIF
Sbjct: 555 HCNLIYPVILYENFYLLAKRRRNRFIIPL--QLIPEREKGLMPPSGVSIEIPGNGIFRKK 612
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDD QYRR++SGITKY TT G SI +KED I
Sbjct: 613 SILAYFDDLQYRRKNSGITKYGTTGG------------------------HSILKKEDLI 648
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG+KEL PKYQ+K+D+ FFIPEEVHILPESSSIMV+NNSL+G+ T IT N RSR GGL
Sbjct: 649 EYRGVKELKPKYQMKIDRFFFIPEEVHILPESSSIMVQNNSLIGLDTRITLNTRSRAGGL 708
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 709 VRVERKKK 716
[149][TOP]
>UniRef100_A6YAL7 RNA polymerase beta' subunit (Fragment) n=1 Tax=Rhodoleia
championii RepID=A6YAL7_9MAGN
Length = 813
Score = 211 bits (536), Expect = 4e-53
Identities = 112/194 (57%), Positives = 136/194 (70%), Gaps = 2/194 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMP--PYGVSVEIPING 411
CT H + +YPAI + + LAKRRRNRF+IPF QSIQER+ E P G+S+EIPING
Sbjct: 77 CTGHCNLIYPAILRENSDLLAKRRRNRFIIPF--QSIQEREKEQTPYSDSGISIEIPING 134
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDDP+YRR SSGITKY T I +HSI +K+D
Sbjct: 135 IFRRNSILAYFDDPRYRRNSSGITKYGT---IEVHSIVKKQD------------------ 173
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYRG+KE P+YQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+ T IT N RS
Sbjct: 174 ---LIEYRGVKEFKPRYQMKVDRFFFIPEEVHILPGSSFIMVRNNSIIGVDTRITLNTRS 230
Query: 50 RVGGLLRLEKKKKK 9
+VGGL+R+E+KKK+
Sbjct: 231 QVGGLVRVERKKKR 244
[150][TOP]
>UniRef100_Q68S16 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Panax ginseng
RepID=RPOC2_PANGI
Length = 1387
Score = 211 bits (536), Expect = 4e-53
Identities = 112/189 (59%), Positives = 133/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H + Y AI H + LAKRRRNRF+IP QSIQE +NELMP G+S+EIPI+GIF
Sbjct: 552 HCNLPYLAILHANSDLLAKRRRNRFIIPL--QSIQEHENELMPSSGISIEIPIHGIFRKK 609
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR+SSGITKY T I +HSI +KED I
Sbjct: 610 SIIAYFDDPRYRRKSSGITKYGT---IEVHSIVKKED---------------------LI 645
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT RSRVGGL
Sbjct: 646 EYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQITLTTRSRVGGL 705
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 706 VRVERKKKR 714
[151][TOP]
>UniRef100_A4QKI2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Capsella
bursa-pastoris RepID=RPOC2_CAPBU
Length = 1379
Score = 211 bits (536), Expect = 4e-53
Identities = 108/191 (56%), Positives = 137/191 (71%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H +F+Y AIF + + LAKRRRNRFLIPF QSIQE++ E +P G+SVEIPINGIF
Sbjct: 551 TSHYNFIYSAIFQENSDLLAKRRRNRFLIPF--QSIQEQEKEFIPHSGISVEIPINGIFR 608
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIFA+FDDP+YRR+SSGI KY K DSI +KED
Sbjct: 609 RNSIFAFFDDPRYRRKSSGILKYGAL------------------------KADSIIQKED 644
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+++ KY++KVD+ FFIPEEVHILPESS+IMV+N S++G+ T +T NIRS+VG
Sbjct: 645 MIEYRGVQKFKTKYEMKVDRFFFIPEEVHILPESSAIMVQNYSIIGVDTRLTLNIRSQVG 704
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 705 GLIRVERKKKR 715
[152][TOP]
>UniRef100_A1XKE4 RNA polymerase beta chain (Fragment) n=1 Tax=Sanguinaria canadensis
RepID=A1XKE4_SANCA
Length = 853
Score = 210 bits (535), Expect = 6e-53
Identities = 114/192 (59%), Positives = 133/192 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YPA H+ LAKRRRNRF+IP QS QER EL+P G+S+EIP+NGIF
Sbjct: 99 CNGHCNFIYPATLHENSYLLAKRRRNRFIIPL--QSNQERDKELIPRSGISIEIPLNGIF 156
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDD +YRR+SSGITKY T I +HSI +KED
Sbjct: 157 RRNSILAYFDDLRYRRKSSGITKYET---IEMHSIVKKED-------------------- 193
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYR KE KYQ KVD+ FFIPEEVHIL ESSSIMV+NNS++G+ T ITFNIRSRV
Sbjct: 194 -LIEYRRAKEFRQKYQKKVDRFFFIPEEVHILSESSSIMVQNNSIIGVDTRITFNIRSRV 252
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKKK
Sbjct: 253 GGLVRVEKKKKK 264
[153][TOP]
>UniRef100_A1XK53 RNA polymerase beta chain (Fragment) n=1 Tax=Ilex sp. Qiu 94038
RepID=A1XK53_9AQUA
Length = 866
Score = 210 bits (535), Expect = 6e-53
Identities = 111/192 (57%), Positives = 135/192 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT + +YPAI + + LAK RRNRF+IP QSIQER+NELMP +S+EIPINGIF
Sbjct: 103 CTGRCNLIYPAILPENSDLLAKSRRNRFIIPL--QSIQERENELMPRSDISIEIPINGIF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
SI AYFDDP+YRR+S GITKY T I +HSI +KED
Sbjct: 161 RRKSILAYFDDPRYRRKSLGITKYGT---IEVHSIVKKED-------------------- 197
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE+ PKYQ+KVD+ FFIPEEVHILP SSSIMVR+ S++G+ T IT N RSRV
Sbjct: 198 -LIEYRGVKEVRPKYQMKVDRFFFIPEEVHILPGSSSIMVRBXSIIGVDTQITLNTRSRV 256
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 257 GGLVRVERKKKR 268
[154][TOP]
>UniRef100_A1XK29 RNA polymerase beta chain (Fragment) n=1 Tax=Acorus gramineus
RepID=A1XK29_ACOGR
Length = 838
Score = 210 bits (535), Expect = 6e-53
Identities = 110/188 (58%), Positives = 133/188 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP+I H+ +FLAKRR+NRF+IPF + QE + EL+P G+S+EIPINGI
Sbjct: 82 HWNFIYPSILHENSDFLAKRRKNRFIIPFQYD--QEGEKELLPHSGISIEIPINGILRRY 139
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDD +YRR SSGITKY T + DSI +KEDFI
Sbjct: 140 SILAYFDDTRYRRSSSGITKYGTV------------------------EIDSIVKKEDFI 175
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE + KYQ+KVD+ FFIPEEVHILP SSSIMVRNNSL+G+ T IT NIRSRVGGL
Sbjct: 176 EYRGTKEFSSKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSLIGVDTRITLNIRSRVGGL 235
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 236 VRVERKKK 243
[155][TOP]
>UniRef100_Q2VEI6 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Solanum tuberosum
RepID=RPOC2_SOLTU
Length = 1392
Score = 210 bits (535), Expect = 6e-53
Identities = 108/192 (56%), Positives = 133/192 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT + +Y I H + L+KRRRN+F+IP SIQE +NELMP G+S+EIP+NGIF
Sbjct: 552 CTGQYNLVYSPILHGNSDLLSKRRRNKFIIPL--HSIQELENELMPCSGISIEIPVNGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+SSGI KY T + S+ +KE
Sbjct: 610 RRNSILAYFDDPRYRRKSSGIIKYGTI------------------------ETHSVIKKE 645
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS+VG+ T IT N+RSRV
Sbjct: 646 DLIEYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIVGVDTQITLNLRSRV 705
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 706 GGLVRVERKKKR 717
[156][TOP]
>UniRef100_Q2MIJ7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Solanum
bulbocastanum RepID=RPOC2_SOLBU
Length = 1392
Score = 210 bits (535), Expect = 6e-53
Identities = 108/192 (56%), Positives = 133/192 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT + +Y I H + L+KRRRN+F+IP SIQE +NELMP G+S+EIP+NGIF
Sbjct: 552 CTGQYNLVYSPILHGNSDLLSKRRRNKFIIPL--HSIQELENELMPCSGISIEIPVNGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+SSGI KY T + S+ +KE
Sbjct: 610 RRNSILAYFDDPRYRRKSSGIIKYGTI------------------------ETHSVIKKE 645
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS+VG+ T IT N+RSRV
Sbjct: 646 DLIEYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIVGVDTQITLNLRSRV 705
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 706 GGLVRVERKKKR 717
[157][TOP]
>UniRef100_A9XW76 DNA-directed RNA polymerase (Fragment) n=1 Tax=Floerkea
proserpinacoides RepID=A9XW76_FLOPR
Length = 1257
Score = 210 bits (534), Expect = 7e-53
Identities = 112/191 (58%), Positives = 134/191 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT HS+ +Y I H+ + LAK RRN FLIPF QS QE++ EL+P G+S+EIP NGIF
Sbjct: 515 CTSHSNLIYSVILHENSDLLAKSRRNTFLIPF--QSSQEQEKELLPYSGISIEIPKNGIF 572
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI A+FD+P+YRR+SSGI KY T IG S+ +KED
Sbjct: 573 RRNSILAFFDNPRYRRKSSGILKYGT---IGAQSVVKKED-------------------- 609
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+K+L KYQIKVDQ FFIPEEVHILPESSSIMVRNNSL+G+ T IT N RS+V
Sbjct: 610 -MIEYRGVKKLKTKYQIKVDQFFFIPEEVHILPESSSIMVRNNSLIGVDTQITLNTRSQV 668
Query: 44 GGLLRLEKKKK 12
GGL+RLE+KKK
Sbjct: 669 GGLVRLERKKK 679
[158][TOP]
>UniRef100_A1XKF3 RNA polymerase beta chain (Fragment) n=1 Tax=Hedycarya arborea
RepID=A1XKF3_9MAGN
Length = 761
Score = 210 bits (534), Expect = 7e-53
Identities = 112/187 (59%), Positives = 132/187 (70%)
Frame = -1
Query: 569 HFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSNSI 390
+F+YPAI H+ + LAKRRRNRF+IPF QS QER+ ELMP G+S+EIPINGI NSI
Sbjct: 60 NFIYPAILHENSDLLAKRRRNRFIIPF--QSDQEREKELMPRSGISIEIPINGILRRNSI 117
Query: 389 FAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFIEY 210
AYFDDP+YRR SSGITKY T IG+G SI +KED IEY
Sbjct: 118 LAYFDDPRYRRSSSGITKYGT-IGVG-----------------------SIVKKEDLIEY 153
Query: 209 RGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLLR 30
R K PKYQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+ T I N RSRVGGL+R
Sbjct: 154 RRAKGFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIALNTRSRVGGLVR 213
Query: 29 LEKKKKK 9
+E+KKK+
Sbjct: 214 VERKKKR 220
[159][TOP]
>UniRef100_A1XKB0 RNA polymerase beta chain (Fragment) n=1 Tax=Euphorbia milii var.
splendens RepID=A1XKB0_EUPMI
Length = 814
Score = 210 bits (534), Expect = 7e-53
Identities = 109/192 (56%), Positives = 137/192 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YP I ++ + LAKRRRN+F+IPF QSIQER+ E M +S+EIPINGIF
Sbjct: 78 CTGHCNLIYPPILYENSDLLAKRRRNKFIIPF--QSIQEREKEQMTYSTISIEIPINGIF 135
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NS+F+YFDDPQY+R+SSGITKY IG+HSI +KED
Sbjct: 136 RRNSVFSYFDDPQYQRKSSGITKYGA---IGVHSIVKKED-------------------- 172
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
I Y+G+KE PKYQ++VD+ FFIPEEV+ILPESSS+MVRNNSLVG+ T I+ N RSR
Sbjct: 173 -LIAYQGVKEFKPKYQMQVDRFFFIPEEVYILPESSSLMVRNNSLVGVDTQISLNTRSRG 231
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKKK
Sbjct: 232 GGLVRVERKKKK 243
[160][TOP]
>UniRef100_A1XK82 RNA polymerase beta chain (Fragment) n=1 Tax=Blandfordia
grandiflora RepID=A1XK82_9ASPA
Length = 856
Score = 210 bits (534), Expect = 7e-53
Identities = 107/188 (56%), Positives = 133/188 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP+IF + FL+KRRRNRF+IP + QER+ EL+P +G+S+EIPINGI N
Sbjct: 99 HWNFIYPSIFQENSYFLSKRRRNRFIIPLQYD--QEREKELIPCFGISIEIPINGILRRN 156
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 157 SILAYFDDPRYRRSSSGITKYGTV------------------------EVDSIVKKEDLI 192
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE +PKYQ+KVD+ FFIPEEVHILP SSSIMV+NNS++GI T + N +SRVGGL
Sbjct: 193 EYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVQNNSIIGINTRLALNTKSRVGGL 252
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 253 VRVERKKK 260
[161][TOP]
>UniRef100_A1XK71 RNA polymerase beta chain (Fragment) n=1 Tax=Carludovica palmata
RepID=A1XK71_9LILI
Length = 844
Score = 210 bits (534), Expect = 7e-53
Identities = 108/188 (57%), Positives = 133/188 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP+ H+ +FLAKRRRNRF+IP + QER+ EL+P +G+S+EIPINGI N
Sbjct: 89 HWNFIYPSTLHENSDFLAKRRRNRFIIPLQYD--QEREKELIPCFGISIEIPINGILRRN 146
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T IG+ DS+ +KED I
Sbjct: 147 SILAYFDDPRYRRSSSGITKYGT---IGV---------------------DSMIKKEDLI 182
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE KYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T + N RSRVGGL
Sbjct: 183 EYRGAKEFRTKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRLALNTRSRVGGL 242
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 243 VRVERKKK 250
[162][TOP]
>UniRef100_A1XK60 RNA polymerase beta chain (Fragment) n=1 Tax=Nepenthes sp. 'Kosobe'
RepID=A1XK60_9CARY
Length = 856
Score = 210 bits (534), Expect = 7e-53
Identities = 113/191 (59%), Positives = 134/191 (70%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H + +YPA D LAKRRRN+F+IPF QSIQER+ EL+PP +S+EIPINGIF
Sbjct: 104 TGHCNLIYPAKNSD---LLAKRRRNKFIIPF--QSIQEREKELIPPSDLSIEIPINGIFR 158
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR+SSGIT+YRT + SI +KE
Sbjct: 159 RNSILAYFDDPRYRRKSSGITQYRTI------------------------EAHSIVKKEG 194
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+KE PKYQ+KVD+ FFIPEE+HILP SS IMVRNNSL+G+ T IT N RSRVG
Sbjct: 195 LIEYRGVKEFRPKYQMKVDRFFFIPEEMHILPASSYIMVRNNSLIGVDTQITLNTRSRVG 254
Query: 41 GLLRLEKKKKK 9
GL+R+EKKKKK
Sbjct: 255 GLVRVEKKKKK 265
[163][TOP]
>UniRef100_Q09X27 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Morus indica
RepID=RPOC2_MORIN
Length = 1389
Score = 210 bits (534), Expect = 7e-53
Identities = 116/194 (59%), Positives = 134/194 (69%), Gaps = 3/194 (1%)
Frame = -1
Query: 581 TDHSHFMYPAIFH---DTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPING 411
TDHS+ ++P+I H D F LAKRRRNRF+IPF Q IQER+ EL P +S+EIPING
Sbjct: 556 TDHSNLIFPSILHKDSDLF-LLAKRRRNRFIIPF--QWIQEREKELWPRSSISIEIPING 612
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDD QYRR+ SGITKY IG+HSI +KED
Sbjct: 613 IFRKNSILAYFDDLQYRRKGSGITKYGA---IGLHSILKKED------------------ 651
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEY G+KE PKYQ KVDQ FFIPEEVHILPES SIMVRNNS++G+ T IT N RS
Sbjct: 652 ---LIEYGGVKEFKPKYQTKVDQFFFIPEEVHILPESFSIMVRNNSIIGVDTRITLNTRS 708
Query: 50 RVGGLLRLEKKKKK 9
RVGGL+R+EKK K+
Sbjct: 709 RVGGLVRVEKKNKR 722
[164][TOP]
>UniRef100_A0A325 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Coffea arabica
RepID=RPOC2_COFAR
Length = 1391
Score = 210 bits (534), Expect = 7e-53
Identities = 112/191 (58%), Positives = 138/191 (72%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT + + +YPAI H+ + L+KRRRNRF++P QSIQER+NE G+S+EIPINGIF
Sbjct: 552 CTGYCNRIYPAILHENSDLLSKRRRNRFIMPL--QSIQERENESP---GISIEIPINGIF 606
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI +YFDDP+YRR+SSGITKY T I +HS+ +KED
Sbjct: 607 RRNSILSYFDDPRYRRKSSGITKYGT---IEMHSLVKKED-------------------- 643
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMV+NNS++GI T IT NIRSRV
Sbjct: 644 -LIEYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVQNNSIIGIDTQITLNIRSRV 702
Query: 44 GGLLRLEKKKK 12
GGL+R+E+KKK
Sbjct: 703 GGLVRVERKKK 713
[165][TOP]
>UniRef100_A6YAL6 RNA polymerase beta' subunit (Fragment) n=1 Tax=Pterostemon
rotundifolius RepID=A6YAL6_9MAGN
Length = 811
Score = 209 bits (533), Expect = 1e-52
Identities = 111/193 (57%), Positives = 137/193 (70%), Gaps = 2/193 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMP--PYGVSVEIPING 411
CTDH + +YPAI H+ ++ L+KRRRNRF+IP QS QER+ E M G+S+EIPING
Sbjct: 96 CTDHCNLIYPAILHENYDLLSKRRRNRFIIPS--QSSQEREKEQMSHSDSGISIEIPING 153
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI A FDDP+YRR+SSGITKY T IG+ SI +KED
Sbjct: 154 IFRRNSILASFDDPRYRRKSSGITKYGT---IGVQSIVKKED------------------ 192
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYRG+KE PKYQ++VD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RS
Sbjct: 193 ---LIEYRGVKEFKPKYQMQVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRITLNKRS 249
Query: 50 RVGGLLRLEKKKK 12
R+GGL+R+E+KK+
Sbjct: 250 RIGGLVRVERKKR 262
[166][TOP]
>UniRef100_A6YAL5 RNA polymerase beta' subunit (Fragment) n=1 Tax=Peridiscus lucidus
RepID=A6YAL5_9MAGN
Length = 828
Score = 209 bits (533), Expect = 1e-52
Identities = 112/193 (58%), Positives = 136/193 (70%), Gaps = 2/193 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMP--PYGVSVEIPING 411
CT H + +YPAI H+ + LAK RRNRF+IPF QSIQER+ E MP G+S+EIPING
Sbjct: 87 CTGHCNLIYPAILHENSDLLAKGRRNRFIIPF--QSIQEREKEQMPHSDSGISIEIPING 144
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDDP+YRR+SSGITKY T I +HSI +K+D I
Sbjct: 145 IFRRNSILAYFDDPRYRRKSSGITKYET---IEVHSIVKKKDLI---------------- 185
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
EYRG+KE P+YQ+KV++ FFIPEEVHIL SSSIMVRNNS++G+ T I N RS
Sbjct: 186 ---EFEYRGVKEFKPRYQMKVNRFFFIPEEVHILTGSSSIMVRNNSIIGVNTRIALNTRS 242
Query: 50 RVGGLLRLEKKKK 12
RVGGL+R+E+KKK
Sbjct: 243 RVGGLVRVERKKK 255
[167][TOP]
>UniRef100_A1XKC4 RNA polymerase beta chain (Fragment) n=1 Tax=Illicium floridanum
RepID=A1XKC4_ILLFL
Length = 754
Score = 209 bits (533), Expect = 1e-52
Identities = 110/189 (58%), Positives = 130/189 (68%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H F+YPAI H+ N LAKRRRNRF+I SFQ QER+ +L P G+ +EIPINGI N
Sbjct: 34 HWDFIYPAILHENSNLLAKRRRNRFII--SFQHDQEREKKLPPRSGIKIEIPINGILRRN 91
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +K+D I
Sbjct: 92 SILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIVKKDDLI 127
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KEL PKYQ+KVD FFIPEEVHILP SS IMVRNNS++G+ T IT N RSR+GGL
Sbjct: 128 EYRGAKELRPKYQMKVDPFFFIPEEVHILPGSSPIMVRNNSIIGVDTRITLNTRSRIGGL 187
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 188 VRVERKKKR 196
[168][TOP]
>UniRef100_A1XK07 RNA polymerase beta chain (Fragment) n=1 Tax=Leea guineensis
RepID=A1XK07_LEEGU
Length = 829
Score = 209 bits (533), Expect = 1e-52
Identities = 111/191 (58%), Positives = 133/191 (69%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T + + PAI H+ + LAKRRRNRF+IPF QSIQER+ ELMPP G+S+EIPINGIF
Sbjct: 77 TGRCNLIDPAILHENSDLLAKRRRNRFIIPF--QSIQEREKELMPPSGISIEIPINGIFR 134
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDD +YRR SSGITKY T I +HSI +KED
Sbjct: 135 RNSILAYFDDARYRRNSSGITKYGT---IEVHSIVKKED--------------------- 170
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+KE PKYQ+KVD+ FFIPEEVHILP S+SIMVR NS++G+ T I N RSR+G
Sbjct: 171 LIEYRGVKEFKPKYQMKVDRFFFIPEEVHILPGSASIMVRTNSIIGVDTRIALNTRSRIG 230
Query: 41 GLLRLEKKKKK 9
GL+R +KKK+
Sbjct: 231 GLVRAGEKKKR 241
[169][TOP]
>UniRef100_A6MMT4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Illicium
oligandrum RepID=RPOC2_ILLOL
Length = 1385
Score = 209 bits (533), Expect = 1e-52
Identities = 110/189 (58%), Positives = 130/189 (68%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H F+YPAI H+ N LAKRRRNRF+I SFQ QER+ +L P G+ +EIPINGI N
Sbjct: 555 HWDFIYPAILHENSNLLAKRRRNRFII--SFQHDQEREKKLPPRSGIKIEIPINGILRRN 612
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +K+D I
Sbjct: 613 SILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIVKKDDLI 648
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KEL PKYQ+KVD FFIPEEVHILP SS IMVRNNS++G+ T IT N RSR+GGL
Sbjct: 649 EYRGAKELRPKYQMKVDPFFFIPEEVHILPGSSPIMVRNNSIIGVDTRITLNTRSRIGGL 708
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 709 VRVERKKKR 717
[170][TOP]
>UniRef100_A9XW45 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anisoptera marginata
RepID=A9XW45_9ROSI
Length = 1259
Score = 209 bits (532), Expect = 1e-52
Identities = 109/189 (57%), Positives = 136/189 (71%)
Frame = -1
Query: 578 DHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHS 399
+ S+F+Y AI H+ + L KRRRNRF+IPF SIQ+++ LMP G+S+EIPINGIF
Sbjct: 518 EQSNFIYSAILHENSDLLGKRRRNRFIIPF--HSIQDQEKALMPHSGISIEIPINGIFRR 575
Query: 398 NSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDF 219
NSI ++FDD +Y+R SSGITKY T IG+HSI + ED
Sbjct: 576 NSILSFFDDFRYKRNSSGITKYGT---IGVHSIVKNED---------------------V 611
Query: 218 IEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGG 39
IEYRG+K+LNPKYQ KVD+ FFIPEEVHILPESSSIMVRNNS+VG+ T +T N RS+VGG
Sbjct: 612 IEYRGVKKLNPKYQTKVDRFFFIPEEVHILPESSSIMVRNNSIVGVDTQLTLNTRSQVGG 671
Query: 38 LLRLEKKKK 12
L+R+E+KKK
Sbjct: 672 LVRVERKKK 680
[171][TOP]
>UniRef100_A1XKF7 RNA polymerase beta chain (Fragment) n=1 Tax=Laurus nobilis
RepID=A1XKF7_9MAGN
Length = 760
Score = 209 bits (532), Expect = 1e-52
Identities = 111/189 (58%), Positives = 132/189 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP I H+ + LAKRRRNRF+IPF QS QER+ ELMP G+S+EIPING+ N
Sbjct: 57 HWNFIYPTILHENSDLLAKRRRNRFIIPF--QSDQEREKELMPRSGISIEIPINGVLPRN 114
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP YRR SSGITKY T IG+G SI +KED I
Sbjct: 115 SILAYFDDPLYRRSSSGITKYGT-IGVG-----------------------SIVKKEDLI 150
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYR KE PKYQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+ T I N RS+VGGL
Sbjct: 151 EYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIALNTRSQVGGL 210
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 211 VRVERKKKR 219
[172][TOP]
>UniRef100_A1XKA8 RNA polymerase beta chain (Fragment) n=1 Tax=Cinnamomum camphora
RepID=A1XKA8_CINCA
Length = 777
Score = 209 bits (532), Expect = 1e-52
Identities = 111/189 (58%), Positives = 132/189 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP I H+ + LAKRRRNRF+IPF QS QER+ ELMP G+S+EIPING+ N
Sbjct: 60 HWNFIYPTILHENSDLLAKRRRNRFIIPF--QSDQEREKELMPRSGISIEIPINGVLPRN 117
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP YRR SSGITKY T IG+G SI +KED I
Sbjct: 118 SILAYFDDPLYRRSSSGITKYGT-IGVG-----------------------SIVKKEDLI 153
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYR KE PKYQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+ T I N RS+VGGL
Sbjct: 154 EYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRIALNTRSQVGGL 213
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 214 VRVERKKKR 222
[173][TOP]
>UniRef100_A1XK96 RNA polymerase beta chain (Fragment) n=1 Tax=Beaucarnea recurvata
RepID=A1XK96_BEARE
Length = 830
Score = 209 bits (532), Expect = 1e-52
Identities = 109/190 (57%), Positives = 134/190 (70%), Gaps = 2/190 (1%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP+I + +FLAKRRRNRFLIP + QER+ EL+P +G+S+EIPINGI N
Sbjct: 79 HWNFIYPSILQENSDFLAKRRRNRFLIPLQYD--QEREKELIPSFGISIEIPINGILRRN 136
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR+SSGITKY T + DSI +KED I
Sbjct: 137 SILAYFDDPRYRRKSSGITKYGTA------------------------EVDSIVKKEDLI 172
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITF--NIRSRVG 42
EYRG KE +PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T + N RSRVG
Sbjct: 173 EYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVG 232
Query: 41 GLLRLEKKKK 12
GL+R+E+KKK
Sbjct: 233 GLVRVERKKK 242
[174][TOP]
>UniRef100_A1XK51 RNA polymerase beta chain (Fragment) n=1 Tax=Nicotiana tabacum
RepID=A1XK51_TOBAC
Length = 802
Score = 209 bits (532), Expect = 1e-52
Identities = 106/192 (55%), Positives = 133/192 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C + +Y I H+ + L+KRRRN+F+IP SIQE +NELMP G+S+EIP+NGIF
Sbjct: 37 CAGQYNLVYSPILHENSDLLSKRRRNKFIIPL--HSIQELENELMPCSGISIEIPVNGIF 94
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+SSGI KY T + S+ +KE
Sbjct: 95 RRNSILAYFDDPRYRRKSSGIIKYGTV------------------------ETHSVIKKE 130
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D +EYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS+VG+ T IT N+RSRV
Sbjct: 131 DLLEYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIVGVDTQITLNLRSRV 190
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 191 GGLVRVERKKKR 202
[175][TOP]
>UniRef100_A1XK43 RNA polymerase beta chain (Fragment) n=1 Tax=Polygonum sp. Qiu
94110 RepID=A1XK43_9CARY
Length = 821
Score = 209 bits (532), Expect = 1e-52
Identities = 112/191 (58%), Positives = 133/191 (69%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T HS+ +YPA D FLAKRRR RF+IPF Q IQER+ E MPP G+S+EIPING F
Sbjct: 79 TGHSNLIYPAKNSD---FLAKRRRKRFIIPF--QPIQEREKEFMPPSGISIEIPINGSFR 133
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR+SSGITKY T + SI +KE
Sbjct: 134 RNSILAYFDDPRYRRESSGITKYGTI------------------------EAHSIIKKEG 169
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+KEL KYQ++VD+ FFIPEEVHILP +SSIMV+NNS++G+ T IT N RSRVG
Sbjct: 170 LIEYRGVKELRAKYQMQVDRFFFIPEEVHILPRASSIMVQNNSIIGVDTQITLNTRSRVG 229
Query: 41 GLLRLEKKKKK 9
GL+R+EKKKKK
Sbjct: 230 GLVRVEKKKKK 240
[176][TOP]
>UniRef100_A1XK24 RNA polymerase beta chain (Fragment) n=1 Tax=Butomus umbellatus
RepID=A1XK24_BUTUM
Length = 824
Score = 209 bits (532), Expect = 1e-52
Identities = 108/186 (58%), Positives = 130/186 (69%)
Frame = -1
Query: 569 HFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSNSI 390
+F+YP+IF + + LAKRRRNRF+IP + QER EL+P +G+S+EIPINGI NSI
Sbjct: 69 NFIYPSIFQENSDLLAKRRRNRFIIPLQYYD-QERDKELIPCFGISMEIPINGILRRNSI 127
Query: 389 FAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFIEY 210
AYFDDP+YRR SSGI KY T + DS+ +KED IEY
Sbjct: 128 LAYFDDPRYRRSSSGIIKYGTL------------------------EVDSVVKKEDLIEY 163
Query: 209 RGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLLR 30
RG KE NPKYQ+KVDQ FFIPEEVHILP SS IMVRNNS++G+ T IT NIRSRV GL+R
Sbjct: 164 RGTKEFNPKYQMKVDQFFFIPEEVHILPGSSIIMVRNNSIIGVDTQITLNIRSRVSGLVR 223
Query: 29 LEKKKK 12
+E+KKK
Sbjct: 224 VERKKK 229
[177][TOP]
>UniRef100_Q3C1G9 DNA-directed RNA polymerase subunit beta'' n=3 Tax=Nicotiana
RepID=RPOC2_NICSY
Length = 1392
Score = 209 bits (532), Expect = 1e-52
Identities = 106/192 (55%), Positives = 133/192 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C + +Y I H+ + L+KRRRN+F+IP SIQE +NELMP G+S+EIP+NGIF
Sbjct: 552 CAGQYNLVYSPILHENSDLLSKRRRNKFIIPL--HSIQELENELMPCSGISIEIPVNGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+SSGI KY T + S+ +KE
Sbjct: 610 RRNSILAYFDDPRYRRKSSGIIKYGTV------------------------ETHSVIKKE 645
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D +EYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS+VG+ T IT N+RSRV
Sbjct: 646 DLLEYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIVGVDTQITLNLRSRV 705
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 706 GGLVRVERKKKR 717
[178][TOP]
>UniRef100_A6YAL9 RNA polymerase beta' subunit (Fragment) n=1 Tax=Saxifraga
integrifolia RepID=A6YAL9_SAXIN
Length = 812
Score = 209 bits (531), Expect = 2e-52
Identities = 112/193 (58%), Positives = 136/193 (70%), Gaps = 2/193 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPY--GVSVEIPING 411
CTDH + +YPAI ++ + L+KRR+NRF+IPF QSIQER+ E MP G+S+EIPING
Sbjct: 77 CTDHCNTIYPAIHYENSDLLSKRRKNRFMIPF--QSIQEREKEKMPHLDSGISIEIPING 134
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
I SI AYFDDP+YRR SSGITKY T I +HSI +KED
Sbjct: 135 ILRKKSILAYFDDPRYRRNSSGITKYGT---IEVHSIVKKED------------------ 173
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYRG KE P+YQ++VD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RS
Sbjct: 174 ---LIEYRGGKEFKPRYQMQVDRFFFIPEEVHILPGSSSIMVRNNSIIGVSTRITLNKRS 230
Query: 50 RVGGLLRLEKKKK 12
RVGGL+R+E+KKK
Sbjct: 231 RVGGLVRMERKKK 243
[179][TOP]
>UniRef100_A1XKC0 RNA polymerase beta chain (Fragment) n=1 Tax=Kadsura japonica
RepID=A1XKC0_9MAGN
Length = 787
Score = 209 bits (531), Expect = 2e-52
Identities = 109/188 (57%), Positives = 129/188 (68%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H F YPAI HD N LAKRRRNRF+I +FQ QER+ EL P G+ ++IPINGI N
Sbjct: 58 HWDFRYPAILHDNSNLLAKRRRNRFII--AFQHAQEREKELSPRSGIEIQIPINGILRRN 115
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +K+D I
Sbjct: 116 SILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIVKKDDLI 151
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KEL PKYQ+KV++ FFIPEEVHILP SS IMVRNNS++G+ T IT N RSR+GGL
Sbjct: 152 EYRGAKELRPKYQMKVNRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRITLNTRSRIGGL 211
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 212 VRVERKKK 219
[180][TOP]
>UniRef100_A9XWD0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zelkova serrata
RepID=A9XWD0_9ROSA
Length = 1247
Score = 208 bits (530), Expect = 2e-52
Identities = 113/185 (61%), Positives = 132/185 (71%), Gaps = 2/185 (1%)
Frame = -1
Query: 557 PAIFHDT--FNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSNSIFA 384
P+I H+ F LAKRRRNRF+IPF Q IQER+ EL +S+E+PINGIF NSIFA
Sbjct: 499 PSILHNNSYFFLLAKRRRNRFIIPF--QWIQEREKELTHRSSISIELPINGIFRRNSIFA 556
Query: 383 YFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFIEYRG 204
YFDDPQYRR+SSGITKY IG+HSIF+KED IEYRG
Sbjct: 557 YFDDPQYRRKSSGITKYGV---IGLHSIFKKED---------------------LIEYRG 592
Query: 203 IKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLLRLE 24
+KE PKY ++VD FFIPEEVHILPESSSIMVRNNS++G+ T IT N RS+VGGL+R+E
Sbjct: 593 VKEFKPKYPMRVDPFFFIPEEVHILPESSSIMVRNNSIIGVDTRITLNTRSQVGGLVRVE 652
Query: 23 KKKKK 9
KKKKK
Sbjct: 653 KKKKK 657
[181][TOP]
>UniRef100_A1XKD0 RNA polymerase beta chain (Fragment) n=1 Tax=Oxalis sp. Qiu 94028
RepID=A1XKD0_9ROSI
Length = 827
Score = 208 bits (530), Expect = 2e-52
Identities = 110/192 (57%), Positives = 133/192 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H + + PA+ H+ +AKRRRN+F+IP QSIQE + EL P +S+EIPI+GIF
Sbjct: 103 CIGHCNLIDPALLHENSYLMAKRRRNKFIIPL--QSIQEHEKELKPRSDISIEIPISGIF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSIF+YFDDPQYRR+SSGITKY T IG+HSI +KED
Sbjct: 161 RRNSIFSYFDDPQYRRRSSGITKYGT---IGVHSIVKKED-------------------- 197
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE KYQ KVDQ FIPEEV+I PESSSIMVRNNS++G+ T IT N R+RV
Sbjct: 198 -LIEYRGVKEFKQKYQKKVDQFCFIPEEVYIFPESSSIMVRNNSIIGVDTQITLNTRNRV 256
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKKK
Sbjct: 257 GGLVRVEKKKKK 268
[182][TOP]
>UniRef100_A1XK14 RNA polymerase beta chain (Fragment) n=1 Tax=Sabia sp. Qiu 91025
RepID=A1XK14_9MAGN
Length = 863
Score = 208 bits (530), Expect = 2e-52
Identities = 113/192 (58%), Positives = 133/192 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YP H+ LAKRRRN F+IPF QS QER+ ELM G+S+EIPINGIF
Sbjct: 103 CNGHCNFIYPPTLHENSYLLAKRRRNGFIIPF--QSTQEREKELMLRSGISIEIPINGIF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR SSGITKY T I +HSI +KED
Sbjct: 161 RRNSILAYFDDPRYRRNSSGITKYDT---IEVHSIAKKED-------------------- 197
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
+IEYR +KE +PKYQ+KVD+ F IPEEVHIL SSSIMVRNNSL+G+ T IT N RSRV
Sbjct: 198 -WIEYRRVKEFSPKYQMKVDRFFCIPEEVHILLGSSSIMVRNNSLIGVDTRITLNTRSRV 256
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKKK
Sbjct: 257 GGLVRVERKKKK 268
[183][TOP]
>UniRef100_Q2MIB0 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Solanum
lycopersicum RepID=RPOC2_SOLLC
Length = 1392
Score = 208 bits (530), Expect = 2e-52
Identities = 107/192 (55%), Positives = 132/192 (68%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT + +Y I H L+KRRRN+F+IP SIQE +NELMP G+S+EIP+NGIF
Sbjct: 552 CTGQYNLVYSPILHGNSALLSKRRRNKFIIPL--HSIQELENELMPCSGISIEIPVNGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+SSGI KY T + S+ +KE
Sbjct: 610 RRNSILAYFDDPRYRRKSSGIIKYGTI------------------------ETHSVIKKE 645
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEYRG+KE PKYQ+KVD+ FFIPEEVHILP SSS+MVRNNS+VG+ T IT N+RSRV
Sbjct: 646 DLIEYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSLMVRNNSIVGVDTQITLNLRSRV 705
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 706 GGLVRVERKKKR 717
[184][TOP]
>UniRef100_A4QK08 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Arabis hirsuta
RepID=RPOC2_ARAHI
Length = 1371
Score = 208 bits (530), Expect = 2e-52
Identities = 105/191 (54%), Positives = 136/191 (71%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H +F+Y IFH+ + LAKRRRNRFLIPF Q IQE++ E +P G+S+EIPI GIF
Sbjct: 551 TSHYNFIYSTIFHENSDLLAKRRRNRFLIPF--QLIQEQEKEFIPHLGISIEIPITGIFR 608
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIFA+FDDP+YRR+SSGI KY T + DSI +KED
Sbjct: 609 RNSIFAFFDDPRYRRKSSGILKYGTL------------------------RADSIIQKED 644
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+++ KY++KVD+ FFIPEEVHILPES++IMV+N S++G+ T IT NIRS+VG
Sbjct: 645 MIEYRGVQKFKTKYEMKVDRFFFIPEEVHILPESAAIMVQNYSIIGVNTRITLNIRSQVG 704
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 705 GLIRVERKKKR 715
[185][TOP]
>UniRef100_A9XW60 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cephalotus
follicularis RepID=A9XW60_CEPFO
Length = 1257
Score = 208 bits (529), Expect = 3e-52
Identities = 108/191 (56%), Positives = 136/191 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CTD+S+ +YPAI + + LAKRR+N+ +IPF QSIQER+ ELM G+S+EIPI+GIF
Sbjct: 518 CTDYSNLIYPAILQENSDLLAKRRKNKLIIPF--QSIQEREKELMARSGISIEIPISGIF 575
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFD PQYRR+SSGITKY T IG+HSI +KED
Sbjct: 576 RRNSILAYFDAPQYRRKSSGITKYGT---IGMHSIVKKED-------------------- 612
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEY G+KE PKYQ+K+DQ FFIPEEV+ILPESS I VRNNS++G+ T I N +S+V
Sbjct: 613 -LIEYPGVKEFKPKYQMKIDQFFFIPEEVYILPESSPIRVRNNSIIGVDTKIALNTKSQV 671
Query: 44 GGLLRLEKKKK 12
GGL+R+E+KK+
Sbjct: 672 GGLVRVERKKQ 682
[186][TOP]
>UniRef100_A1XK44 RNA polymerase beta chain (Fragment) n=1 Tax=Phytolacca americana
RepID=A1XK44_PHYAM
Length = 862
Score = 208 bits (529), Expect = 3e-52
Identities = 111/189 (58%), Positives = 135/189 (71%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H + +YPA D LAKRRRNRF+IPF QS QE++ ELMP +S+E+PINGIF N
Sbjct: 101 HCNLIYPAKNSD---LLAKRRRNRFIIPF--QSSQEQEKELMPLSAISIEVPINGIFRRN 155
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SIFAYFDDP+YRR+SSGITKY T + +HS+ +KED I
Sbjct: 156 SIFAYFDDPRYRRKSSGITKYGT---VEMHSVVKKED---------------------LI 191
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RSRVGG+
Sbjct: 192 EYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQITLNTRSRVGGV 251
Query: 35 LRLEKKKKK 9
+R+E+KKKK
Sbjct: 252 VRVERKKKK 260
[187][TOP]
>UniRef100_A1XK40 RNA polymerase beta chain (Fragment) n=1 Tax=Eupomatia bennettii
RepID=A1XK40_9MAGN
Length = 859
Score = 208 bits (529), Expect = 3e-52
Identities = 110/189 (58%), Positives = 130/189 (68%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP I H+ + LAKRRRNRF+IPF + QER+ ELMP G+S+EIPINGI N
Sbjct: 104 HWNFLYPHILHENSDLLAKRRRNRFIIPFQYD--QEREKELMPHSGISIEIPINGILRRN 161
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDD +YRR SSGITKY T + DSI +KED I
Sbjct: 162 SILAYFDDLRYRRSSSGITKYGTI------------------------EVDSIVKKEDLI 197
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE + KYQ+KVD+ FFIPEEVHILP SS IMVRNNS+VG+ T I N RSRVGGL
Sbjct: 198 EYRGAKEFSSKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSIVGVDTRIALNTRSRVGGL 257
Query: 35 LRLEKKKKK 9
+R+E+KKKK
Sbjct: 258 VRVERKKKK 266
[188][TOP]
>UniRef100_Q33C48 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Nicotiana
tomentosiformis RepID=RPOC2_NICTO
Length = 1392
Score = 208 bits (529), Expect = 3e-52
Identities = 106/192 (55%), Positives = 133/192 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C + +Y I H+ + L+KRRRN+F+IP SIQE +NELMP G+S+EIP+NGIF
Sbjct: 552 CAGQYNLVYSPILHENSDLLSKRRRNKFIIPL--HSIQELENELMPCSGISIEIPVNGIF 609
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+SSGI KY T + S+ +KE
Sbjct: 610 RRNSILAYFDDPRYRRKSSGIIKYGTV------------------------ETHSVIKKE 645
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D +EYRG+KE +PKYQ+KVD FFIPEEVHILP SSSIMVRNNS+VG+ T IT N+RSRV
Sbjct: 646 DLLEYRGVKEFSPKYQMKVDLFFFIPEEVHILPGSSSIMVRNNSIVGVDTQITLNLRSRV 705
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 706 GGLVRVERKKKQ 717
[189][TOP]
>UniRef100_Q0G9X2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Daucus carota
RepID=RPOC2_DAUCA
Length = 1390
Score = 208 bits (529), Expect = 3e-52
Identities = 110/184 (59%), Positives = 130/184 (70%)
Frame = -1
Query: 560 YPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSNSIFAY 381
YP I + ++ LAKRRR RF+IP QSIQER+NELMPP G+S+EIPINGIF NSI A+
Sbjct: 557 YPTIPYADYDLLAKRRRKRFIIPL--QSIQERENELMPPSGISIEIPINGIFRINSILAF 614
Query: 380 FDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFIEYRGI 201
FDDP+YRR+SSGITKY T + D I +KED IEYRG+
Sbjct: 615 FDDPRYRRKSSGITKYGTI------------------------EVDPIAKKEDLIEYRGV 650
Query: 200 KELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLLRLEK 21
KE PKYQIKVD+ FFIPEE+HILP SSSIMVRNNS++GI T I RSRVGGL+R+E
Sbjct: 651 KEFKPKYQIKVDRFFFIPEEMHILPGSSSIMVRNNSIIGIDTQIALTTRSRVGGLVRVEI 710
Query: 20 KKKK 9
KKK+
Sbjct: 711 KKKR 714
[190][TOP]
>UniRef100_Q09MI8 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Citrus sinensis
RepID=RPOC2_CITSI
Length = 1403
Score = 208 bits (529), Expect = 3e-52
Identities = 106/189 (56%), Positives = 136/189 (71%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H + ++PAI H + LAKR+RN FLIPF SIQE++ ELMP G+S+EIP+ GIF
Sbjct: 556 TGHCNLIHPAILHANSDLLAKRQRNGFLIPF--HSIQEQEKELMPHSGISIEIPVRGIFR 613
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR+SSGITK+ T +G HSI +KED
Sbjct: 614 RNSILAYFDDPRYRRKSSGITKWGT---LGAHSIVKKED--------------------- 649
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+K++ PKYQ+K+D++FFIPEEVHI PESS +MVRNNS++G+ T IT NIRSRVG
Sbjct: 650 LIEYRGLKKIKPKYQMKIDRLFFIPEEVHIFPESSYLMVRNNSIIGVDTQITLNIRSRVG 709
Query: 41 GLLRLEKKK 15
GL+R+E+K+
Sbjct: 710 GLVRMERKR 718
[191][TOP]
>UniRef100_A9XWC1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Swietenia macrophylla
RepID=A9XWC1_9ROSI
Length = 1291
Score = 207 bits (528), Expect = 4e-52
Identities = 110/189 (58%), Positives = 134/189 (70%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H + ++P I H + LAKRRRNRFLIPF QSIQE++ ELMP G+S+EIPI GI
Sbjct: 529 TGHCNLIHPPIRHANSDLLAKRRRNRFLIPF--QSIQEQEKELMPHSGISIEIPIKGILR 586
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR+SSGITKY T +G HSI +KE+
Sbjct: 587 RNSILAYFDDPRYRRKSSGITKYGT---LGAHSIVKKEN--------------------- 622
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+K++ PKYQ+K+D+ FFIPEEVH LPE S IMVRNNS+VG+ T IT NIRSRVG
Sbjct: 623 LIEYRGLKKMKPKYQMKIDRFFFIPEEVHTLPEFSYIMVRNNSIVGVDTRITLNIRSRVG 682
Query: 41 GLLRLEKKK 15
GL+R+E+KK
Sbjct: 683 GLVRMERKK 691
[192][TOP]
>UniRef100_A9XW99 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neurada procumbens
RepID=A9XW99_9ROSI
Length = 1265
Score = 207 bits (528), Expect = 4e-52
Identities = 107/191 (56%), Positives = 135/191 (70%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T HS+ Y AI ++ + LAKRRRNRF+IPF +SIQE+ EL+P G+S+EIP NGIF
Sbjct: 520 TGHSNLTYSAISYENSDLLAKRRRNRFIIPFQSKSIQEQDKELIPHSGISIEIPTNGIFR 579
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI A+FDD +YRR SSGITKY IG HSI +KED
Sbjct: 580 RNSILAFFDDSRYRRNSSGITKYGA---IGTHSIVKKED--------------------- 615
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
+EYRG+K+ PKYQ+KVD+ FFIPEEVHILPESSSIMV++NSL+G+ T +T N RS+VG
Sbjct: 616 VLEYRGVKKFKPKYQMKVDRFFFIPEEVHILPESSSIMVQSNSLIGVDTRLTLNTRSQVG 675
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 676 GLVRVERKKKR 686
[193][TOP]
>UniRef100_A1XKB8 RNA polymerase beta chain (Fragment) n=1 Tax=Lactoris fernandeziana
RepID=A1XKB8_LACFR
Length = 784
Score = 207 bits (528), Expect = 4e-52
Identities = 109/192 (56%), Positives = 134/192 (69%), Gaps = 2/192 (1%)
Frame = -1
Query: 578 DHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHS 399
DH +F+YPAI H+ +FLAKRRRN F++PF + QER+ ELMP G+S+EIPI GI
Sbjct: 60 DHWNFLYPAILHENSDFLAKRRRNGFILPFQYD--QEREKELMPRSGISIEIPITGILRK 117
Query: 398 NSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDF 219
NSI AYFDDP+YR+ SSGITKY T + DSI +KED
Sbjct: 118 NSILAYFDDPRYRKSSSGITKYGTI------------------------EVDSILKKEDL 153
Query: 218 IEYRGIKELNPKYQI--KVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEY G K+ P YQ+ KVD+ FFIPEEVHILP SSS+MVRNNS++GIGT IT NIRSRV
Sbjct: 154 IEYWGSKKFRPIYQMQMKVDRFFFIPEEVHILPGSSSLMVRNNSIIGIGTRITLNIRSRV 213
Query: 44 GGLLRLEKKKKK 9
GGL+R+++KKK+
Sbjct: 214 GGLVRVDRKKKR 225
[194][TOP]
>UniRef100_A1XK19 RNA polymerase beta chain (Fragment) n=1 Tax=Xanthorhiza
simplicissima RepID=A1XK19_XANSI
Length = 861
Score = 207 bits (528), Expect = 4e-52
Identities = 111/192 (57%), Positives = 133/192 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C DH +F+YPAI D AKRRRNRF+IP QS QE++ E +P G+S+EIPING+F
Sbjct: 103 CNDHCNFIYPAILDDNSYLFAKRRRNRFIIPL--QSNQEQEKEAIPRSGISIEIPINGLF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+SSGITKY T I +HSI +KED
Sbjct: 161 RINSILAYFDDPRYRRKSSGITKYGT---IEVHSIVKKED-------------------- 197
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYR KE K Q+K+D +FFIPEEVHILP SSSIMVRNNS++G+ T ITFN RSRV
Sbjct: 198 -LIEYRRTKEFRLKSQMKIDLLFFIPEEVHILPGSSSIMVRNNSIIGVDTRITFNTRSRV 256
Query: 44 GGLLRLEKKKKK 9
GGL+R++KKKKK
Sbjct: 257 GGLVRVDKKKKK 268
[195][TOP]
>UniRef100_Q49L08 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Eucalyptus
globulus subsp. globulus RepID=RPOC2_EUCGG
Length = 1392
Score = 207 bits (528), Expect = 4e-52
Identities = 110/189 (58%), Positives = 130/189 (68%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H + YP F + + LAKRRRNRFLIP QSIQERK ELMP G+S+E+PINGI N
Sbjct: 556 HCNLKYPTTFDENSDLLAKRRRNRFLIPL--QSIQERKKELMPHSGISIELPINGILRRN 613
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR+SSGI KY T +G+HS+ +KED I
Sbjct: 614 SILAYFDDPRYRRKSSGIIKYGT---LGVHSVVKKED---------------------LI 649
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRGIKE K Q+K+D FFIPEEVHI PESSSIMVRNNSL+G+ T I N RSRVGGL
Sbjct: 650 EYRGIKEFKQKCQMKLDPFFFIPEEVHIFPESSSIMVRNNSLIGVDTRIALNTRSRVGGL 709
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 710 VRVERKKKR 718
[196][TOP]
>UniRef100_A9XWC3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Terminalia catappa
RepID=A9XWC3_TERCT
Length = 1274
Score = 207 bits (527), Expect = 5e-52
Identities = 111/192 (57%), Positives = 133/192 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C + +YPAI H+ + LAKRRRNRFLIPF QSIQE + L+P G+S+E+PINGIF
Sbjct: 518 CIGQWNLIYPAILHENSDLLAKRRRNRFLIPF--QSIQEGEKALIPNSGISMELPINGIF 575
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR +SGITKY T IG+H I + E
Sbjct: 576 RRNSILAYFDDPRYRRNTSGITKYGT---IGVHLIVKTEA-------------------- 612
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRGIKE N KY +K+D+ FFIPEEVHIL ESSSIMVRNNSL+G+ T IT N RSRV
Sbjct: 613 -LIEYRGIKEFNAKYPMKIDRFFFIPEEVHILSESSSIMVRNNSLIGVDTRITLNTRSRV 671
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 672 GGLVRVERKKKR 683
[197][TOP]
>UniRef100_A9XWB1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Reseda lutea
RepID=A9XWB1_9ROSI
Length = 1008
Score = 207 bits (527), Expect = 5e-52
Identities = 107/191 (56%), Positives = 138/191 (72%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T +S+ +Y AI + + LAKRRRNRFLIPF QSIQE++ ELMP G+S+EIPINGIF
Sbjct: 519 TGYSNAIYSAIVQENSDLLAKRRRNRFLIPF--QSIQEQEKELMPHSGISIEIPINGIFR 576
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIF++FDDP+YRR+SSGI KY T + +SI +KED
Sbjct: 577 RNSIFSFFDDPRYRRKSSGILKYGTI------------------------EANSIVKKED 612
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+K+ KYQ+KVD+ FFIPEEVHILPESSS+MVRNNS++G+ T IT N++S+V
Sbjct: 613 IIEYRGVKKFKTKYQMKVDRFFFIPEEVHILPESSSLMVRNNSMIGVDTRITLNLKSKVR 672
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 673 GLVRVERKKKR 683
[198][TOP]
>UniRef100_A6YAK9 RNA polymerase beta' subunit (Fragment) n=1 Tax=Itea virginica
RepID=A6YAK9_9MAGN
Length = 839
Score = 207 bits (527), Expect = 5e-52
Identities = 110/193 (56%), Positives = 135/193 (69%), Gaps = 2/193 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMP--PYGVSVEIPING 411
CTDH + +YP+I H+ ++ L+KRRRNRF+IP F+SIQER+ E P G+S+EIPI G
Sbjct: 96 CTDHCNLIYPSILHENYDLLSKRRRNRFIIP--FKSIQEREKEQKPHSDSGISIEIPIKG 153
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IF NSI AYFDDP+YRR+SSGITKY T + SI +
Sbjct: 154 IFRRNSILAYFDDPRYRRKSSGITKYGTI------------------------EAHSIVK 189
Query: 230 KEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
KED IEYRG+KE PKYQ VD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RS
Sbjct: 190 KEDLIEYRGVKEFKPKYQ--VDRFFFIPEEVHILPVSSSIMVRNNSIIGVDTRITLNKRS 247
Query: 50 RVGGLLRLEKKKK 12
RVGGL+R+E+KK+
Sbjct: 248 RVGGLVRVERKKR 260
[199][TOP]
>UniRef100_A1XKB3 RNA polymerase beta chain (Fragment) n=1 Tax=Philodendron
hederaceum var. oxycardium RepID=A1XKB3_9ARAE
Length = 763
Score = 207 bits (527), Expect = 5e-52
Identities = 104/188 (55%), Positives = 130/188 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H + YP+I H+ F AKRR+NR +IP + Q+R+ EL+P +GVS+EIPINGI N
Sbjct: 43 HWNLKYPSILHENSYFFAKRRKNRLIIPLQYD--QKREKELIPHFGVSIEIPINGILRRN 100
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 101 SILAYFDDPRYRRNSSGITKYGTV------------------------EVDSIVKKEDLI 136
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE +PKYQ+KVD+ FFIPEEVH+LP SS IMVRNNS++G+ TP+T N RSR+GGL
Sbjct: 137 EYRGAKEFSPKYQMKVDRFFFIPEEVHVLPGSSLIMVRNNSIIGVDTPLTLNTRSRIGGL 196
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 197 VRVERKKK 204
[200][TOP]
>UniRef100_A1XK91 RNA polymerase beta chain (Fragment) n=1 Tax=Lomandra obliqua
RepID=A1XK91_9ASPA
Length = 862
Score = 207 bits (526), Expect = 6e-52
Identities = 107/190 (56%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP+I + ++FLAKRRRNRFLIP + QER+ EL+P + +S+EIPINGI N
Sbjct: 106 HWNFIYPSILQENYDFLAKRRRNRFLIPLQYD--QEREKELIPSFSISIEIPINGILRRN 163
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR+SSGITKY T + DSI +KED I
Sbjct: 164 SILAYFDDPRYRRKSSGITKYSTI------------------------EADSIVKKEDLI 199
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITF--NIRSRVG 42
EYRG KE +PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T + N RS VG
Sbjct: 200 EYRGTKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVNTQLALNTNTRSLVG 259
Query: 41 GLLRLEKKKK 12
GL+R+E+KKK
Sbjct: 260 GLVRVERKKK 269
[201][TOP]
>UniRef100_A1XK94 RNA polymerase beta chain (Fragment) n=1 Tax=Hortonia floribunda
RepID=A1XK94_9MAGN
Length = 790
Score = 206 bits (525), Expect = 8e-52
Identities = 110/189 (58%), Positives = 130/189 (68%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI + + LAKRRRNRFLIPF QER+ ELMP G+S+EIPINGI N
Sbjct: 73 HWNFIYPAILRENSDLLAKRRRNRFLIPFQLD--QEREKELMPRSGISIEIPINGILRRN 130
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YR+ SSGITKY T IG+G SI +KED I
Sbjct: 131 SILAYFDDPRYRKNSSGITKYGT-IGVG-----------------------SIVKKEDLI 166
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYR KE PKYQ+KVD+ FFIPEEVHILP S IMVRNNS++G+ T I N RSRVGGL
Sbjct: 167 EYRRAKEFRPKYQMKVDRFFFIPEEVHILPGSLPIMVRNNSIIGVDTRIALNTRSRVGGL 226
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 227 VRVERKKKR 235
[202][TOP]
>UniRef100_A1XK49 RNA polymerase beta chain (Fragment) n=1 Tax=Impatiens pallida
RepID=A1XK49_9ERIC
Length = 815
Score = 206 bits (525), Expect = 8e-52
Identities = 105/191 (54%), Positives = 137/191 (71%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T + + +YP+I HD +FLAKRRRNR +IP QSIQE++ ELMPP G+++EIPINGI
Sbjct: 58 TGYYNLIYPSILHDNSDFLAKRRRNRLIIPL--QSIQEQEKELMPPLGIAIEIPINGIPR 115
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AY DDP+YRR+SSGITKY T I +HSI +KE
Sbjct: 116 RNSIIAYIDDPRYRRKSSGITKYGT---IEVHSIVKKEG--------------------- 151
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+KE+ PKY++K+D+ FFIPEEVH+LP S SIMV+NNS++G+ T IT N ++RVG
Sbjct: 152 LIEYRGVKEVRPKYEMKIDRFFFIPEEVHLLPGSCSIMVQNNSIIGVDTQITLNTKNRVG 211
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 212 GLVRVERKKKR 222
[203][TOP]
>UniRef100_A1XK21 RNA polymerase beta chain (Fragment) n=1 Tax=Cocculus trilobus
RepID=A1XK21_9MAGN
Length = 865
Score = 206 bits (525), Expect = 8e-52
Identities = 109/190 (57%), Positives = 133/190 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YPA H + LAKRRRNRF+IPF +S QE++ EL+P G+S+EIPINGIF
Sbjct: 103 CKGHCNFIYPATLHADSDLLAKRRRNRFIIPF--RSNQEQEKELIPRSGISMEIPINGIF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR SSG+TKY T G+HSI +K+
Sbjct: 161 RRNSILAYFDDPRYRRNSSGVTKYGTR---GVHSIVKKQY-------------------- 197
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG KE KYQ K+D+ FFIPEEVHILP SSSIMV+NNS++G+ T ITFNIRS+V
Sbjct: 198 -LIEYRGTKEFRSKYQKKIDRFFFIPEEVHILPGSSSIMVQNNSIIGVDTRITFNIRSQV 256
Query: 44 GGLLRLEKKK 15
GGL+R+EKKK
Sbjct: 257 GGLVRVEKKK 266
[204][TOP]
>UniRef100_Q2L8Z5 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Gossypium hirsutum
RepID=RPOC2_GOSHI
Length = 1393
Score = 206 bits (525), Expect = 8e-52
Identities = 107/191 (56%), Positives = 134/191 (70%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H F+Y AI H+ + LAKRRRNRF+IPF QE++ L G+S+EIPINGIF
Sbjct: 549 TGHCDFIYSAILHENADLLAKRRRNRFIIPFQLIQDQEKELMLHSHSGISMEIPINGIFR 608
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
SI A+FDDP+YRR+SSGITKY T +G HSI ++ED
Sbjct: 609 RKSILAFFDDPRYRRKSSGITKYGT---LGAHSIVKRED--------------------- 644
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+K++ PKYQ+KVD+ FFIPEEVHIL ESSSIMVRNNS++G+ TPIT N RS+VG
Sbjct: 645 VIEYRGVKKVKPKYQMKVDRFFFIPEEVHILSESSSIMVRNNSIIGVDTPITLNTRSQVG 704
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 705 GLVRVERKKKR 715
[205][TOP]
>UniRef100_A4QL09 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Draba nemorosa
RepID=RPOC2_DRANE
Length = 1381
Score = 206 bits (525), Expect = 8e-52
Identities = 107/191 (56%), Positives = 135/191 (70%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H +F+Y IFH+ + LAKRRRNRFLIPF QSIQE++ E + G+S+EIPINGIF
Sbjct: 551 TSHYNFIYSTIFHENSDLLAKRRRNRFLIPF--QSIQEQEKEFIRHSGISIEIPINGIFR 608
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIFA+FDDP+YRR+SSGI KY T + DSI +KED
Sbjct: 609 RNSIFAFFDDPRYRRKSSGILKYGTL------------------------RADSIIQKED 644
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG ++ KY++KVD+ FFIPEEVHILPESS IMV+N S++G+ T IT NIRS+VG
Sbjct: 645 MIEYRGGQKFKTKYEMKVDRFFFIPEEVHILPESSVIMVQNYSIIGVNTRITLNIRSQVG 704
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 705 GLIRVERKKKR 715
[206][TOP]
>UniRef100_A1XKD8 RNA polymerase beta chain (Fragment) n=1 Tax=Agave attenuata
RepID=A1XKD8_AGAAE
Length = 761
Score = 206 bits (524), Expect = 1e-51
Identities = 107/190 (56%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP+I + +FLAK+RRNRFLIP + QER+ EL+P + +S+EIPINGI N
Sbjct: 13 HWNFIYPSILQENSDFLAKKRRNRFLIPLQYD--QEREKELIPSFNISIEIPINGILRRN 70
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR+SSGITKY T + DSI +KED I
Sbjct: 71 SILAYFDDPRYRRKSSGITKYGTV------------------------EADSIVKKEDLI 106
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITF--NIRSRVG 42
EYRG KE +PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T + N RSRVG
Sbjct: 107 EYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVG 166
Query: 41 GLLRLEKKKK 12
GL+R+E+KKK
Sbjct: 167 GLVRVERKKK 176
[207][TOP]
>UniRef100_A9QAX6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anethum graveolens
RepID=A9QAX6_9APIA
Length = 1386
Score = 206 bits (523), Expect = 1e-51
Identities = 110/184 (59%), Positives = 132/184 (71%)
Frame = -1
Query: 560 YPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSNSIFAY 381
YP I + ++ LAKRRR RF+IP QSIQER+NELMP G+S+EIPINGIF NSI A+
Sbjct: 557 YPTILYADYDLLAKRRRKRFIIPL--QSIQERENELMPLSGISIEIPINGIFRRNSILAF 614
Query: 380 FDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFIEYRGI 201
FDDP+YRR+SSGITKY T I ++ I +KED IEYRG+
Sbjct: 615 FDDPRYRRKSSGITKYGT---IEVYPIAKKED---------------------LIEYRGV 650
Query: 200 KELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLLRLEK 21
KE PKYQIKVD+ FFIPEEVHILP+SSSIMVRNNS++GI T I+ RSRVGGL+R+E
Sbjct: 651 KEFRPKYQIKVDRFFFIPEEVHILPKSSSIMVRNNSIIGIDTQISLTTRSRVGGLVRVEI 710
Query: 20 KKKK 9
KKK+
Sbjct: 711 KKKR 714
[208][TOP]
>UniRef100_A6YAL8 RNA polymerase beta' subunit (Fragment) n=1 Tax=Ribes americanum
RepID=A6YAL8_RIBAM
Length = 808
Score = 206 bits (523), Expect = 1e-51
Identities = 111/190 (58%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Frame = -1
Query: 578 DHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELM--PPYGVSVEIPINGIF 405
DH + +YPAI H+ ++ L+KRRRNRF+IPF QSIQER+ E M G+ +EIP NGIF
Sbjct: 100 DHCNLIYPAILHENYDLLSKRRRNRFIIPF--QSIQEREKEQMRHSDSGILIEIPRNGIF 157
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR SSGITKY T I +HSI +KED
Sbjct: 158 RKNSILAYFDDPRYRRNSSGITKYGT---IEVHSIVKKED-------------------- 194
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG KE P+YQ++VDQ FFIPEEVHILP SSSIMVRNNS++G+ T IT N RSRV
Sbjct: 195 -LIEYRGGKEFKPRYQMQVDQFFFIPEEVHILPGSSSIMVRNNSIIGVSTRITLNKRSRV 253
Query: 44 GGLLRLEKKK 15
GGL+R+E+KK
Sbjct: 254 GGLVRVERKK 263
[209][TOP]
>UniRef100_A6YAK4 RNA polymerase beta' subunit (Fragment) n=1 Tax=Daphniphyllum sp.
205-82 RepID=A6YAK4_9MAGN
Length = 793
Score = 205 bits (522), Expect = 2e-51
Identities = 111/191 (58%), Positives = 133/191 (69%), Gaps = 2/191 (1%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMP--PYGVSVEIPINGI 408
T H + +YPAI + + LAKRRRNRF+IPF QSIQER+ E MP G+ +EIPINGI
Sbjct: 88 TSHCNLIYPAILPENSDLLAKRRRNRFIIPF--QSIQEREKEQMPHSDSGILIEIPINGI 145
Query: 407 FHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEK 228
F NSI AYFDDP+YRR S G+TKY T I +HSI +KED
Sbjct: 146 FRINSILAYFDDPRYRRNSLGLTKYGT---IEVHSIVKKED------------------- 183
Query: 227 EDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSR 48
FIEYRG+KE P+YQ+KVD+ FFIPEEVHILP S SIMVRNNS++G+ T IT N RS+
Sbjct: 184 --FIEYRGVKEFKPRYQMKVDRFFFIPEEVHILPGSCSIMVRNNSIIGVDTLITLNTRSQ 241
Query: 47 VGGLLRLEKKK 15
VGGL+R+EKKK
Sbjct: 242 VGGLVRVEKKK 252
[210][TOP]
>UniRef100_A1XKA7 RNA polymerase beta chain (Fragment) n=1 Tax=Coffea arabica
RepID=A1XKA7_COFAR
Length = 850
Score = 205 bits (522), Expect = 2e-51
Identities = 110/191 (57%), Positives = 136/191 (71%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT + + +YPAI H+ + L+KRRRNRF++P QSIQER+NE G+S+EIPINGIF
Sbjct: 86 CTGYCNRIYPAILHENSDLLSKRRRNRFIMPL--QSIQERENESP---GISIEIPINGIF 140
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI +YFDDP+YRR+SSGITKY T I +HS+ +KED
Sbjct: 141 RRNSILSYFDDPRYRRKSSGITKYGT---IEMHSLVKKED-------------------- 177
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE PKYQ+KVD+ FFIPEEVHILP SIMV+NNS++GI T IT NIRSRV
Sbjct: 178 -LIEYRGVKEFRPKYQMKVDRFFFIPEEVHILPGFFSIMVQNNSIIGIDTQITLNIRSRV 236
Query: 44 GGLLRLEKKKK 12
GGL+R+E+KKK
Sbjct: 237 GGLVRVERKKK 247
[211][TOP]
>UniRef100_A1XK87 RNA polymerase beta chain (Fragment) n=1 Tax=Aristolochia
macrophylla RepID=A1XK87_ARIMA
Length = 832
Score = 205 bits (522), Expect = 2e-51
Identities = 107/189 (56%), Positives = 129/189 (68%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI ++ + L KRRRNRF++PF + QER+ ELM G+S+EI I GI N
Sbjct: 79 HWNFIYPAILYENSDLLGKRRRNRFILPFQYD--QEREKELMSCSGISIEILITGILRKN 136
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDPQYRR +SGITKY T + D I +KED I
Sbjct: 137 SILAYFDDPQYRRSNSGITKYGTI------------------------EVDFILKKEDLI 172
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+GT I N RSRVGGL
Sbjct: 173 EYRGAKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVGTRIALNTRSRVGGL 232
Query: 35 LRLEKKKKK 9
+R+E+KKKK
Sbjct: 233 VRVERKKKK 241
[212][TOP]
>UniRef100_A1XK18 RNA polymerase beta chain (Fragment) n=1 Tax=Sargentodoxa cuneata
RepID=A1XK18_9MAGN
Length = 861
Score = 205 bits (522), Expect = 2e-51
Identities = 109/192 (56%), Positives = 132/192 (68%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F YPAI H+ +AKRRRNRF+IPF Q QER+ EL+P G+S+ IPINGIF
Sbjct: 103 CNGHCNFTYPAILHENSALVAKRRRNRFIIPF--QPNQEREKELIPYSGISIAIPINGIF 160
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDD QYRR SSGITKY T I +HSI +K+D
Sbjct: 161 RRNSILAYFDDLQYRRNSSGITKYGT---IEMHSIVKKDD-------------------- 197
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG KE KYQ+K+D+ FFIPEEVHILP S+SIMVRNNSL+G+ T IT N +SRV
Sbjct: 198 -LIEYRGTKEFRSKYQMKIDRFFFIPEEVHILPGSASIMVRNNSLIGVDTQITLNRKSRV 256
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KK++
Sbjct: 257 GGLVRVERKKRR 268
[213][TOP]
>UniRef100_A1XKC8 RNA polymerase beta chain (Fragment) n=1 Tax=Ascarina sp. Thien 500
RepID=A1XKC8_9MAGN
Length = 804
Score = 205 bits (521), Expect = 2e-51
Identities = 107/189 (56%), Positives = 129/189 (68%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H + +YPAI H+ + LAKRRRNRF+IPF + QER+ EL+P G+S+EIPINGI
Sbjct: 82 HWNLIYPAILHENSDLLAKRRRNRFIIPFEYD--QEREKELVPRSGISIEIPINGILRRK 139
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YR SSGITKY T + DSI +KED I
Sbjct: 140 SILAYFDDPRYRGSSSGITKYGTI------------------------EVDSIVKKEDLI 175
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE KYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T I N RSRVGGL
Sbjct: 176 EYRGTKEFRSKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTRIALNTRSRVGGL 235
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 236 VRVERKKKR 244
[214][TOP]
>UniRef100_A1XK05 RNA polymerase beta chain (Fragment) n=1 Tax=Spinacia oleracea
RepID=A1XK05_SPIOL
Length = 839
Score = 205 bits (521), Expect = 2e-51
Identities = 111/189 (58%), Positives = 133/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H + +YPA + LAK+RRNRF+IPF Q QERK ELM G+S+EIPINGIF N
Sbjct: 88 HCNLIYPA---KNLDLLAKKRRNRFIIPF--QGSQERKKELMSLSGISIEIPINGIFRKN 142
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SIFAYFDDP+YRR+SSGITKY T I +HSI +KED I
Sbjct: 143 SIFAYFDDPRYRRKSSGITKYGT---IEMHSIVKKED---------------------LI 178
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG+KE PKYQ+KVD+ FFIPEEVHIL SSSIMVRNNS++G+ T IT N RSR+GG+
Sbjct: 179 EYRGVKEFRPKYQMKVDRFFFIPEEVHILAGSSSIMVRNNSIIGVDTWITLNTRSRIGGV 238
Query: 35 LRLEKKKKK 9
+R+E+KKKK
Sbjct: 239 VRVERKKKK 247
[215][TOP]
>UniRef100_P11704 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Spinacia oleracea
RepID=RPOC2_SPIOL
Length = 1361
Score = 205 bits (521), Expect = 2e-51
Identities = 111/189 (58%), Positives = 133/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H + +YPA + LAK+RRNRF+IPF Q QERK ELM G+S+EIPINGIF N
Sbjct: 550 HCNLIYPA---KNLDLLAKKRRNRFIIPF--QGSQERKKELMSLSGISIEIPINGIFRKN 604
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SIFAYFDDP+YRR+SSGITKY T I +HSI +KED I
Sbjct: 605 SIFAYFDDPRYRRKSSGITKYGT---IEMHSIVKKED---------------------LI 640
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG+KE PKYQ+KVD+ FFIPEEVHIL SSSIMVRNNS++G+ T IT N RSR+GG+
Sbjct: 641 EYRGVKEFRPKYQMKVDRFFFIPEEVHILAGSSSIMVRNNSIIGVDTWITLNTRSRIGGV 700
Query: 35 LRLEKKKKK 9
+R+E+KKKK
Sbjct: 701 VRVERKKKK 709
[216][TOP]
>UniRef100_A0ZZ25 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Gossypium
barbadense RepID=RPOC2_GOSBA
Length = 1391
Score = 205 bits (521), Expect = 2e-51
Identities = 106/191 (55%), Positives = 133/191 (69%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H F+Y AI H+ + LAKRRRNRF+IPF QE++ L G+S+EIPINGIF
Sbjct: 549 TGHCDFIYSAILHENADLLAKRRRNRFIIPFQLIQDQEKELMLHSHSGISMEIPINGIFR 608
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
I A+FDDP+YRR+SSGITKY T +G HSI ++ED
Sbjct: 609 RKGILAFFDDPRYRRKSSGITKYGT---LGAHSIVKRED--------------------- 644
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+K++ PKYQ+KVD+ FFIPEEVHIL ESSSIMVRNNS++G+ TPIT N RS+VG
Sbjct: 645 VIEYRGVKKVKPKYQMKVDRFFFIPEEVHILSESSSIMVRNNSIIGVDTPITLNTRSQVG 704
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 705 GLVRVERKKKR 715
[217][TOP]
>UniRef100_A6YAM0 RNA polymerase beta' subunit (Fragment) n=1 Tax=Saxifraga
stolonifera RepID=A6YAM0_9MAGN
Length = 830
Score = 204 bits (520), Expect = 3e-51
Identities = 111/196 (56%), Positives = 136/196 (69%), Gaps = 5/196 (2%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMP--PYGVSVEIPING 411
CTDHS+ +Y AI H+ ++ L+KRR+NR +IPF QSIQER+ E +P G+S+EIPING
Sbjct: 85 CTDHSNLIYLAILHENYDLLSKRRKNRLIIPF--QSIQEREREQIPHSDSGISIEIPING 142
Query: 410 IFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFE 231
IFH NSI AYFDDP+YRR SSGITKY T I +H SI +
Sbjct: 143 IFHKNSILAYFDDPRYRRNSSGITKYGT---IEVH---------------------SIVK 178
Query: 230 KEDFIEYRG---IKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFN 60
K D IEYRG KE +YQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T IT
Sbjct: 179 KGDLIEYRGGQEFKEFKSRYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVSTRITLT 238
Query: 59 IRSRVGGLLRLEKKKK 12
RSRVGGL+R+E+KK+
Sbjct: 239 KRSRVGGLVRMERKKR 254
[218][TOP]
>UniRef100_A9XWA5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Picramnia polyantha
RepID=A9XWA5_9ROSI
Length = 1275
Score = 204 bits (519), Expect = 4e-51
Identities = 111/197 (56%), Positives = 136/197 (69%), Gaps = 5/197 (2%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSV-----EIP 420
CT + PAI ++ + LAKRRRNRF+IPF QSIQE++NE MP G+S+ E+P
Sbjct: 508 CTGRCNLTSPAILYENSDLLAKRRRNRFIIPF--QSIQEQENEPMPRSGISISGISIEMP 565
Query: 419 INGIFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDS 240
INGIF NSI AYFDDP YR++SSGITKY T IG+ SI +KED
Sbjct: 566 INGIFRRNSILAYFDDPCYRKKSSGITKYGT---IGMQSIVKKED--------------- 607
Query: 239 IFEKEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFN 60
IEYRG+KE PKYQ++VD FFIPEEVHILPESSSIMVRNNS++G+ T I+
Sbjct: 608 ------LIEYRGVKEFKPKYQMRVDPFFFIPEEVHILPESSSIMVRNNSIIGVDTRISLR 661
Query: 59 IRSRVGGLLRLEKKKKK 9
RSRVGGL+R+E+KKK+
Sbjct: 662 TRSRVGGLVRVERKKKR 678
[219][TOP]
>UniRef100_A9XWA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Parnassia palustris
RepID=A9XWA3_PARPL
Length = 1267
Score = 204 bits (519), Expect = 4e-51
Identities = 105/192 (54%), Positives = 136/192 (70%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YPA H +++FLAKRRRNRF+ PF Q IQER+ EL+ P +S+EIPINGIF
Sbjct: 519 CTSHCNLIYPASLHKSYSFLAKRRRNRFITPF--QLIQEREKELISPADISIEIPINGIF 576
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDD QYR++SSGITKY T IG++S+ +KED
Sbjct: 577 RRNSILAYFDDLQYRKKSSGITKYGT---IGVYSVLKKED-------------------- 613
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KEL PK ++K+D FFIP+EVH+LPESSSIMV+N+S++ T I N RS+V
Sbjct: 614 -LIEYRGVKELKPKDKMKIDLFFFIPQEVHLLPESSSIMVQNDSIIRXDTQIALNTRSQV 672
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKK++
Sbjct: 673 GGLVRVEKKKRE 684
[220][TOP]
>UniRef100_A9XW68 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cupaniopsis
anacardioides RepID=A9XW68_CUPAN
Length = 1266
Score = 204 bits (519), Expect = 4e-51
Identities = 109/191 (57%), Positives = 135/191 (70%), Gaps = 2/191 (1%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H + ++ AI H+ + LAKRRRNRFLIPF QSIQE++ ELMP G+S+EIP G+F N
Sbjct: 520 HCNLIHAAILHENSDLLAKRRRNRFLIPF--QSIQEQEKELMPHLGISIEIPTKGVFRKN 577
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SIFAYFDDP+YRR++SGITKY T IG HSI +KED I
Sbjct: 578 SIFAYFDDPRYRRKNSGITKYGT---IGAHSIVKKED---------------------LI 613
Query: 215 EYRGI--KELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
EYRG K++ PKYQ+K D+ FFIPEEVH LPESS +MVRNNSL+G+ T IT N RS+VG
Sbjct: 614 EYRGRGGKKIKPKYQMKFDRFFFIPEEVHTLPESSYVMVRNNSLIGVDTRITLNRRSQVG 673
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 674 GLVRVERKKKR 684
[221][TOP]
>UniRef100_A1XKD5 RNA polymerase beta chain (Fragment) n=1 Tax=Hydrocleys nymphoides
RepID=A1XKD5_9LILI
Length = 776
Score = 204 bits (519), Expect = 4e-51
Identities = 107/188 (56%), Positives = 133/188 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+Y +IF + + L+KRRRNRF+IP + QER+ +L+P +G+S+EIPINGI N
Sbjct: 53 HWNFIYSSIFQENPDLLSKRRRNRFIIPLQYYD-QEREEKLIPRFGISIEIPINGILRRN 111
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGI KY TT + DSI +KE KED I
Sbjct: 112 SILAYFDDPRYRRNSSGIIKYETT-----------------EADSIIKKE-----KEDLI 149
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EY+GIKE N KYQ K+D+ FFIPEEVHILP SS IMVRNNS++G+ T IT NIRSRV GL
Sbjct: 150 EYQGIKEFNLKYQTKMDRFFFIPEEVHILPGSSLIMVRNNSIIGVDTQITLNIRSRVSGL 209
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 210 VRVERKKK 217
[222][TOP]
>UniRef100_Q09FX1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Nandina domestica
RepID=RPOC2_NANDO
Length = 1377
Score = 204 bits (519), Expect = 4e-51
Identities = 108/192 (56%), Positives = 129/192 (67%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H +F+YPAI H+ LAKRRRNRF+IPF + QE++ EL+ G+S+EIPINGIF
Sbjct: 548 CNGHCNFIYPAILHENSYLLAKRRRNRFIIPFQYN--QEQEKELITRSGISIEIPINGIF 605
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR SSGITKY T + SI +KE
Sbjct: 606 RRNSILAYFDDPRYRRNSSGITKYGTI------------------------EAHSIVKKE 641
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEYR PKYQ K+D+ FFIPEEVHILP SSS+MVRNNS++G+ T ITF RSRV
Sbjct: 642 DLIEYRK----RPKYQTKIDRFFFIPEEVHILPGSSSVMVRNNSIIGVNTRITFKTRSRV 697
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKKK
Sbjct: 698 GGLVRVEKKKKK 709
[223][TOP]
>UniRef100_Q4FFY5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Yucca schidigera
RepID=Q4FFY5_9ASPA
Length = 1384
Score = 204 bits (518), Expect = 5e-51
Identities = 106/190 (55%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP+I + +FLAK+RRNRFLIP + QER+ EL+P + +S+EIPINGI N
Sbjct: 552 HWNFIYPSILQENSDFLAKKRRNRFLIPLQYD--QEREKELIPSFNISIEIPINGILRRN 609
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR+SSGI KY T + DSI +KED I
Sbjct: 610 SILAYFDDPRYRRKSSGIIKYGTV------------------------EADSIVKKEDLI 645
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITF--NIRSRVG 42
EYRG KE +PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G+ T + N RSRVG
Sbjct: 646 EYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVG 705
Query: 41 GLLRLEKKKK 12
GL+R+E+KKK
Sbjct: 706 GLVRVERKKK 715
[224][TOP]
>UniRef100_A1XK97 RNA polymerase beta chain (Fragment) n=1 Tax=Simmondsia chinensis
RepID=A1XK97_SIMCH
Length = 800
Score = 204 bits (518), Expect = 5e-51
Identities = 114/194 (58%), Positives = 135/194 (69%), Gaps = 2/194 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YPA D LAK RRNRF+IPF QSIQER+ ELM P G+S+EIPIN IF
Sbjct: 41 CTGHCNHIYPAKNSD---LLAKIRRNRFIIPF--QSIQEREKELMLPSGISIEIPINSIF 95
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSIF YFDDP+YRR+SSGI KY T I +HSI +KED
Sbjct: 96 RRNSIFGYFDDPRYRRKSSGIIKYGT---IEMHSIVKKED-------------------- 132
Query: 224 DFIEYRGIKELNPKYQI--KVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYRG+KE PKYQ+ KVD+ FFIPEEVHILP SSSIMVRN+S++G+ T IT N RS
Sbjct: 133 -LIEYRGVKEFRPKYQMQMKVDRFFFIPEEVHILPGSSSIMVRNDSIIGVDTQITLNTRS 191
Query: 50 RVGGLLRLEKKKKK 9
RVGG++R+E+KKKK
Sbjct: 192 RVGGVVRVERKKKK 205
[225][TOP]
>UniRef100_A7Y3B4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ipomoea purpurea
RepID=RPOC2_IPOPU
Length = 1401
Score = 204 bits (518), Expect = 5e-51
Identities = 115/201 (57%), Positives = 139/201 (69%), Gaps = 9/201 (4%)
Frame = -1
Query: 584 CTDHSHFMYPAIF-----HDTF--NFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVE 426
CTDHS+ +YPAI + F N L+KRRRN+F+IP QSIQERK ELMP G+S++
Sbjct: 552 CTDHSNLVYPAILPILAENSDFLSNLLSKRRRNQFIIPL--QSIQERKKELMPCSGISMK 609
Query: 425 IPINGIFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKE 246
IP NGIF NSI AYFDDP+YRR SSG TKY T + +H
Sbjct: 610 IPTNGIFCGNSIIAYFDDPRYRRMSSGSTKYGT---LEMH-------------------- 646
Query: 245 DSIFEKEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESS--SIMVRNNSLVGIGTP 72
SI +KED I+YRG++E PK+Q KVD+ FFIPEEVHILP SS SIMVRNNS++G+ T
Sbjct: 647 -SIVKKEDLIQYRGVREFRPKHQKKVDRFFFIPEEVHILPGSSSISIMVRNNSIIGVDTQ 705
Query: 71 ITFNIRSRVGGLLRLEKKKKK 9
IT NIRSRVGGL+R+EKKKK+
Sbjct: 706 ITLNIRSRVGGLVRVEKKKKR 726
[226][TOP]
>UniRef100_A9XW41 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ailanthus altissima
RepID=A9XW41_AILAL
Length = 1279
Score = 203 bits (517), Expect = 7e-51
Identities = 105/190 (55%), Positives = 133/190 (70%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H + ++ I H+ + LAKRRRN+F IPF QSI E++ ELMP G+S+EIPI GIF
Sbjct: 525 TGHWNLIHTVILHENSDLLAKRRRNQFFIPF--QSIPEQEKELMPHSGISIEIPIKGIFR 582
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI AYFDDP+YRR+SSGITKY T +G HSI +KED
Sbjct: 583 RNSILAYFDDPRYRRKSSGITKYGT---LGAHSIVKKED--------------------- 618
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
IEYRG+K++ PKYQ+K+D+ F IPEEVH PESS +MVRNNS++G+ T IT NIRSRVG
Sbjct: 619 LIEYRGLKKIKPKYQMKIDRFFCIPEEVHTFPESSYVMVRNNSIIGVDTRITLNIRSRVG 678
Query: 41 GLLRLEKKKK 12
GL+R+E+KK+
Sbjct: 679 GLVRMERKKR 688
[227][TOP]
>UniRef100_A1XK99 RNA polymerase beta chain (Fragment) n=1 Tax=Sterculia balanghas
RepID=A1XK99_9ROSI
Length = 869
Score = 203 bits (517), Expect = 7e-51
Identities = 107/191 (56%), Positives = 132/191 (69%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H F+Y AI H+ + LAKRRRNRF+IPF QE++ L G+S+EIPINGIF
Sbjct: 104 TGHCDFIYSAILHENADLLAKRRRNRFIIPFQLIQDQEKELMLHSHSGISMEIPINGIFR 163
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
SI A+FDDP+YRR+SSGITKY T IG HSI +KED
Sbjct: 164 RKSILAFFDDPRYRRKSSGITKYGT---IGAHSIVKKED--------------------- 199
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
EYRG+K++ PKYQ+KVD+ FFIPEEVHIL ESSSIMVRNNS++G+ T IT N RS+VG
Sbjct: 200 --EYRGVKKVKPKYQMKVDRFFFIPEEVHILSESSSIMVRNNSIIGVDTQITLNTRSQVG 257
Query: 41 GLLRLEKKKKK 9
GL+R+E+KKK+
Sbjct: 258 GLVRVERKKKR 268
[228][TOP]
>UniRef100_A4QJI9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Aethionema
grandiflorum RepID=RPOC2_AETGR
Length = 1383
Score = 203 bits (517), Expect = 7e-51
Identities = 105/189 (55%), Positives = 133/189 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H + +Y AIFH+ + LAKRRRNRFLIPF QSIQE++ E MP G+S+ IPINGIF N
Sbjct: 553 HYNLIYSAIFHENSDLLAKRRRNRFLIPF--QSIQEQEKEFMPHSGISIAIPINGIFRKN 610
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SIF++FDDP+YRR+SSGI KY T + DSI +KED I
Sbjct: 611 SIFSFFDDPRYRRKSSGILKYGTI------------------------EADSIIQKEDMI 646
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG+ + KY++KVD+ FFIPEEVHILPESS IMV+N S++ + T IT NIRS+VGGL
Sbjct: 647 EYRGVHKFKKKYKMKVDRFFFIPEEVHILPESSVIMVQNYSIIRVDTRITLNIRSQVGGL 706
Query: 35 LRLEKKKKK 9
+R+E+KKK+
Sbjct: 707 IRVERKKKR 715
[229][TOP]
>UniRef100_A9XW67 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crypteronia paniculata
RepID=A9XW67_9MYRT
Length = 1004
Score = 203 bits (516), Expect = 9e-51
Identities = 112/193 (58%), Positives = 130/193 (67%), Gaps = 2/193 (1%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T + +YPAIFH +FLAKRRRNRFLIPF QSIQERK ELM G+S+E+PINGIF
Sbjct: 520 TGRCNLIYPAIFHKNSDFLAKRRRNRFLIPF--QSIQERKKELMAHSGISIELPINGIFR 577
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSIFAYFDDP+YRR+SSGITKY T +G+H I +KED
Sbjct: 578 RNSIFAYFDDPRYRRKSSGITKYGT---LGVH---------------------LIVKKED 613
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVH--ILPESSSIMVRNNSLVGIGTPITFNIRSR 48
IEYR IKEL PKYQIK+D+ FFIPEEVH RNNSL+GI T I N RSR
Sbjct: 614 LIEYRAIKELKPKYQIKLDRFFFIPEEVHXXXXXXXXXXXXRNNSLIGIDTRIALNTRSR 673
Query: 47 VGGLLRLEKKKKK 9
VGGL+R+E+KKK+
Sbjct: 674 VGGLVRMERKKKR 686
[230][TOP]
>UniRef100_A1XKA6 RNA polymerase beta chain (Fragment) n=1 Tax=Oenothera organensis
RepID=A1XKA6_OENOR
Length = 796
Score = 203 bits (516), Expect = 9e-51
Identities = 104/191 (54%), Positives = 133/191 (69%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H + +YP+I + + LAKRRRNR +IP QS QER+ EL+P G+S+E+PINGIF
Sbjct: 34 CTLHCNLIYPSILRENSDLLAKRRRNRLVIPV--QSSQEREKELIPHSGISIELPINGIF 91
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
SI A+FDDP+YR +SSGIT+Y T +G+HSI +KED
Sbjct: 92 RKKSILAFFDDPRYRTKSSGITQYET---MGMHSIVKKED-------------------- 128
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
++YRGIKE PKYQ+ +D+ FFIPEEVHILPESSSIMVRNNSL+G+ T I N RSR
Sbjct: 129 -LVDYRGIKEFKPKYQMTIDRFFFIPEEVHILPESSSIMVRNNSLIGVDTRIALNTRSRA 187
Query: 44 GGLLRLEKKKK 12
GGL+R+E+KK+
Sbjct: 188 GGLVRVERKKR 198
[231][TOP]
>UniRef100_A1XK27 RNA polymerase beta chain (Fragment) n=1 Tax=Alisma
plantago-aquatica RepID=A1XK27_ALIPL
Length = 792
Score = 203 bits (516), Expect = 9e-51
Identities = 108/188 (57%), Positives = 132/188 (70%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
HS+F+Y +I + + L+KRRRNRF+IP + QER+ +L+ +G+S+EIPINGI N
Sbjct: 66 HSNFIYSSILQENPDLLSKRRRNRFIIPLQYYD-QEREKKLISRFGISIEIPINGILRRN 124
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGI KY TT + DSI +KE KED I
Sbjct: 125 SILAYFDDPRYRRNSSGIIKYGTT-----------------EVDSIIKKE-----KEDLI 162
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRGIKE N KYQ KVD+ FFIPEEVHILP SS IMVRNNS++G+ T IT NIRSRV GL
Sbjct: 163 EYRGIKEFNLKYQTKVDRFFFIPEEVHILPGSSLIMVRNNSIIGVDTQITLNIRSRVSGL 222
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 223 VRVERKKK 230
[232][TOP]
>UniRef100_A6YAM1 RNA polymerase beta' subunit (Fragment) n=1 Tax=Sedum rubrotinctum
RepID=A6YAM1_SEDRU
Length = 854
Score = 202 bits (515), Expect = 1e-50
Identities = 111/193 (57%), Positives = 130/193 (67%), Gaps = 2/193 (1%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELM--PPYGVSVEIPINGI 408
T H + YPAI ++ L+KRR NR +IPF QSIQERK E+M + VEIPINGI
Sbjct: 100 TGHCNIRYPAILYENSTLLSKRRSNRLIIPF--QSIQERKKEIMLDSDSDILVEIPINGI 157
Query: 407 FHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEK 228
F NSIFAYFDDPQYRR SSGITKY TT + SI +K
Sbjct: 158 FRRNSIFAYFDDPQYRRNSSGITKYGTT------------------------EVHSIVKK 193
Query: 227 EDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSR 48
ED ++YRG KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++G T IT N RSR
Sbjct: 194 EDLVDYRGAKEFKPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGGDTLITLNRRSR 253
Query: 47 VGGLLRLEKKKKK 9
VGGL+R+E+KKK+
Sbjct: 254 VGGLVRIERKKKR 266
[233][TOP]
>UniRef100_A1XK79 RNA polymerase beta chain (Fragment) n=1 Tax=Vriesea splendens
RepID=A1XK79_9POAL
Length = 849
Score = 202 bits (515), Expect = 1e-50
Identities = 104/189 (55%), Positives = 130/189 (68%)
Frame = -1
Query: 578 DHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHS 399
DH + +YP+I + +FLAK+RRNRF+IP + QER+ EL+P +G+S+EIPINGI
Sbjct: 93 DHWNLIYPSILQENPDFLAKKRRNRFIIPLQYD--QEREKELIPCFGISIEIPINGILRG 150
Query: 398 NSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDF 219
NSI AYFDDP+YRR SSGITKY T + DSI +KED
Sbjct: 151 NSILAYFDDPRYRRSSSGITKYGTI------------------------EVDSIIKKEDL 186
Query: 218 IEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGG 39
EYRG KE +PKYQ+KVD+ FFI EEVHILP SS IMVRNNS++G+ T + N RSRVGG
Sbjct: 187 FEYRGAKEFSPKYQMKVDRFFFILEEVHILPGSSLIMVRNNSIIGVDTRLALNTRSRVGG 246
Query: 38 LLRLEKKKK 12
L+R+E+KKK
Sbjct: 247 LVRVERKKK 255
[234][TOP]
>UniRef100_Q06RE1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Jasminum
nudiflorum RepID=RPOC2_JASNU
Length = 1397
Score = 202 bits (515), Expect = 1e-50
Identities = 104/192 (54%), Positives = 131/192 (68%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
CT H +F+ P H + +KRR+N+FLIP QSIQE +N+LMP +S+EIP NG F
Sbjct: 554 CTGHCNFISPTTLHQNSDLFSKRRKNKFLIPL--QSIQEPENKLMPRSSISIEIPQNGTF 611
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+ SGI +Y T I +HSI +KED
Sbjct: 612 RGNSILAYFDDPRYRRKGSGIPQYGT---IEMHSIVKKED-------------------- 648
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
+EYRG+K PKYQ+KVD++FFIPEEVHILP SSSIMVRNNSL+G+ T +T NIRSRV
Sbjct: 649 -LVEYRGVKAFRPKYQMKVDRLFFIPEEVHILPRSSSIMVRNNSLIGVDTQLTLNIRSRV 707
Query: 44 GGLLRLEKKKKK 9
GG +R+E+KKK+
Sbjct: 708 GGFVRVERKKKR 719
[235][TOP]
>UniRef100_Q4FFY6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Typha latifolia
RepID=Q4FFY6_TYPLA
Length = 1387
Score = 202 bits (514), Expect = 2e-50
Identities = 104/188 (55%), Positives = 131/188 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP+I + +FLAK+RR+RF+IP + QE++ EL+P +G+S+EIPINGI
Sbjct: 552 HWNFIYPSILQENSDFLAKKRRDRFIIPLQYD--QEQEKELIPCFGISIEIPINGILRRK 609
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T + DSI +KED I
Sbjct: 610 SILAYFDDPRYRRNSSGITKYGTI------------------------EVDSIIKKEDLI 645
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE +PKYQ+KVDQ FFI EEVHILP SS IMVRNNS++G+ T +T N RSRVGGL
Sbjct: 646 EYRGTKEFSPKYQMKVDQFFFILEEVHILPGSSFIMVRNNSIIGVDTRLTLNTRSRVGGL 705
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 706 VRVERKKK 713
[236][TOP]
>UniRef100_A9XW61 DNA-directed RNA polymerase (Fragment) n=1 Tax=Clidemia dentata
RepID=A9XW61_9MYRT
Length = 1275
Score = 202 bits (514), Expect = 2e-50
Identities = 113/192 (58%), Positives = 135/192 (70%), Gaps = 3/192 (1%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH-S 399
H + +Y AI H + L KRR NRFL+P QSIQERK EL P G+S+E+PINGIF +
Sbjct: 516 HWNLIYTAILHGNSHLLVKRRGNRFLVPI--QSIQERKKELTPHSGISIELPINGIFRRN 573
Query: 398 NSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDF 219
NSIFAYFDDP+YRR+SSGITKY T +G+HSI +KED F
Sbjct: 574 NSIFAYFDDPRYRRKSSGITKYGT---LGVHSIVKKED---------------------F 609
Query: 218 IEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNI--RSRV 45
IE R IKEL KYQ+K+D+ FFIPEEVHILPESS IM+RNNSL+GI T I FNI RS V
Sbjct: 610 IESRPIKELKSKYQMKLDRFFFIPEEVHILPESSLIMIRNNSLIGIDTRIVFNINTRSYV 669
Query: 44 GGLLRLEKKKKK 9
GGL+R+E+KKK+
Sbjct: 670 GGLVRMERKKKR 681
[237][TOP]
>UniRef100_A1XKD7 RNA polymerase beta chain (Fragment) n=1 Tax=Persoonia katerae
RepID=A1XKD7_9MAGN
Length = 827
Score = 202 bits (514), Expect = 2e-50
Identities = 113/194 (58%), Positives = 133/194 (68%), Gaps = 2/194 (1%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C +F YPAI + + LAKRRRNRF+IPF QS QER++E+M +S+EIPINGIF
Sbjct: 59 CNSRCNFAYPAILRENSDLLAKRRRNRFIIPF--QSNQERESEVMSGSSISIEIPINGIF 116
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYFDDP+YRR+SSGITK T I +HSI +KED
Sbjct: 117 RRNSILAYFDDPRYRRKSSGITKPGT---IEVHSIVKKED-------------------- 153
Query: 224 DFIEYRGIKELNPK--YQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRS 51
IEYR KE PK Q KVD+ FFIPEEVHILPESSSIMVRNNS++GI T IT NIRS
Sbjct: 154 -LIEYRRAKEFRPKCKMQTKVDRFFFIPEEVHILPESSSIMVRNNSIIGIDTRITLNIRS 212
Query: 50 RVGGLLRLEKKKKK 9
RVGGL+R+E+KKK+
Sbjct: 213 RVGGLVRVERKKKR 226
[238][TOP]
>UniRef100_Q4FFY7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ranunculus macranthus
RepID=Q4FFY7_RANMC
Length = 1376
Score = 201 bits (512), Expect = 3e-50
Identities = 107/192 (55%), Positives = 132/192 (68%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H + +Y AI + + LAKRRRNRF IP QS QE++ + P G+S+EIPING+F
Sbjct: 553 CNGHCNLIYSAILDENSDLLAKRRRNRFTIPL--QSNQEKEQK--PRSGISIEIPINGLF 608
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYF+DP+YRR+SSGITKY T + DSI +KE
Sbjct: 609 RINSILAYFEDPRYRRKSSGITKYGTI------------------------EVDSIVKKE 644
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEYR KE PKYQ+K+D+ FFIPEEVHILP SSSIM+RNNS++G+ T ITFNIRS+V
Sbjct: 645 DLIEYRRTKEFRPKYQMKIDRFFFIPEEVHILPGSSSIMIRNNSIIGVDTRITFNIRSQV 704
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKKK
Sbjct: 705 GGLVRVEKKKKK 716
[239][TOP]
>UniRef100_A9XWA2 DNA-directed RNA polymerase n=1 Tax=Oxalis latifolia
RepID=A9XWA2_9ROSI
Length = 1370
Score = 201 bits (512), Expect = 3e-50
Identities = 107/192 (55%), Positives = 131/192 (68%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C + + PA+ H+ +AKRRR +F+IP QSIQE + EL P +S+EIPI+GIF
Sbjct: 546 CIGRCNLIDPALLHENSYLMAKRRRKKFIIPL--QSIQEHEKELKPRSDISIEIPISGIF 603
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSIF+YFDDPQYRR+SSGITKY T IG+HSI +KED
Sbjct: 604 RRNSIFSYFDDPQYRRRSSGITKYGT---IGVHSIVKKED-------------------- 640
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
IEYRG+KE KYQ KVD+ FIPEEV+I PESSSIMVRNNS++G+ T IT N R+RV
Sbjct: 641 -LIEYRGVKEFKQKYQKKVDRFCFIPEEVYIFPESSSIMVRNNSIIGVDTQITLNTRNRV 699
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKKK
Sbjct: 700 GGLVRVEKKKKK 711
[240][TOP]
>UniRef100_A1XK78 RNA polymerase beta chain (Fragment) n=1 Tax=Sparganium americanum
RepID=A1XK78_SPAAM
Length = 834
Score = 201 bits (512), Expect = 3e-50
Identities = 104/188 (55%), Positives = 130/188 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP+I + N LAK+RR+RF+IP + QER+ EL+P +G+S+EIPINGI
Sbjct: 79 HWNFIYPSILQENSNLLAKKRRDRFIIPLQYD--QEREKELIPCFGISIEIPINGILRRK 136
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITK+ T + DSI +KED I
Sbjct: 137 SILAYFDDPRYRRNSSGITKHGTI------------------------EVDSIIKKEDLI 172
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE +PKYQ+KVDQ FFI EEVHILP SS IMVRNNS++G+ T +T N RSRVGGL
Sbjct: 173 EYRGAKEFSPKYQMKVDQFFFILEEVHILPGSSFIMVRNNSIIGVDTRLTINTRSRVGGL 232
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 233 VRVERKKK 240
[241][TOP]
>UniRef100_A1XK70 RNA polymerase beta chain (Fragment) n=1 Tax=Croomia pauciflora
RepID=A1XK70_9LILI
Length = 849
Score = 201 bits (512), Expect = 3e-50
Identities = 104/188 (55%), Positives = 130/188 (69%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YP+ + +FLAK RRNRF+IP + QER+ EL+P +G+S+EIPINGI N
Sbjct: 90 HWNFIYPSTLQENSDFLAKGRRNRFIIPLQYD--QEREKELIPCFGISIEIPINGILRRN 147
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY GI + DSI +KED +
Sbjct: 148 SILAYFDDPRYRRSSSGITKY------GIVGV------------------DSIIKKEDLL 183
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EY+G KE PKYQI+VD+ FFIPEEVHILP SS IMVRNNS++G+ T + N RSRVGGL
Sbjct: 184 EYQGTKEFRPKYQIQVDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTRLALNTRSRVGGL 243
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 244 VRVERKKK 251
[242][TOP]
>UniRef100_A1XGM8 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ranunculus
macranthus RepID=RPOC2_RANMC
Length = 1383
Score = 201 bits (512), Expect = 3e-50
Identities = 107/192 (55%), Positives = 132/192 (68%)
Frame = -1
Query: 584 CTDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIF 405
C H + +Y AI + + LAKRRRNRF IP QS QE++ + P G+S+EIPING+F
Sbjct: 550 CNGHCNLIYSAILDENSDLLAKRRRNRFTIPL--QSNQEKEQK--PRSGISIEIPINGLF 605
Query: 404 HSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKE 225
NSI AYF+DP+YRR+SSGITKY T + DSI +KE
Sbjct: 606 RINSILAYFEDPRYRRKSSGITKYGTI------------------------EVDSIVKKE 641
Query: 224 DFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRV 45
D IEYR KE PKYQ+K+D+ FFIPEEVHILP SSSIM+RNNS++G+ T ITFNIRS+V
Sbjct: 642 DLIEYRRTKEFRPKYQMKIDRFFFIPEEVHILPGSSSIMIRNNSIIGVDTRITFNIRSQV 701
Query: 44 GGLLRLEKKKKK 9
GGL+R+EKKKKK
Sbjct: 702 GGLVRVEKKKKK 713
[243][TOP]
>UniRef100_A6YAL3 RNA polymerase beta' subunit (Fragment) n=1 Tax=Paeonia brownii
RepID=A6YAL3_9MAGN
Length = 862
Score = 201 bits (511), Expect = 3e-50
Identities = 109/196 (55%), Positives = 132/196 (67%), Gaps = 5/196 (2%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYG-----VSVEIPI 417
T H + +YPAI + LAKRRRNRF+IPF QSI+ER+ E PP+ + + IPI
Sbjct: 103 TGHCNLIYPAILLENSYLLAKRRRNRFIIPF--QSIREREKE-QPPHSDSGSSIEIPIPI 159
Query: 416 NGIFHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSI 237
NGIF NSI AYFDDP+YRR SSGITKY T + S+
Sbjct: 160 NGIFRRNSILAYFDDPRYRRNSSGITKYGTV------------------------EAHSL 195
Query: 236 FEKEDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNI 57
+KED +EYRG+KE PKYQ+KVD+ FFIPEEVHILP SSSIMVRNNS++GI T I NI
Sbjct: 196 VKKEDLVEYRGVKEFKPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTRIALNI 255
Query: 56 RSRVGGLLRLEKKKKK 9
RSRVGGL+R+E++KKK
Sbjct: 256 RSRVGGLVRVERQKKK 271
[244][TOP]
>UniRef100_A1XKD3 RNA polymerase beta chain (Fragment) n=1 Tax=Trimenia moorei
RepID=A1XKD3_9MAGN
Length = 810
Score = 201 bits (511), Expect = 3e-50
Identities = 107/189 (56%), Positives = 130/189 (68%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI HD N LAK+RRNRF+I SFQ QER+ EL P G+++EIPINGI N
Sbjct: 58 HGNFLYPAILHDNSNLLAKKRRNRFII--SFQHDQEREKELRPRSGIAIEIPINGILRRN 115
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
I AYFDD +YRR+SSGITKY TT G+ +SI +KE++I
Sbjct: 116 HILAYFDDLRYRRRSSGITKYGTT---GV---------------------ESIVKKEEWI 151
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
+Y+G KEL YQ KVD+ FFIPEE H P SS IMVRNNSL+G+ TPIT N RSRVGGL
Sbjct: 152 DYQGAKELISTYQTKVDRFFFIPEEAHTFPRSSPIMVRNNSLIGVDTPITLNRRSRVGGL 211
Query: 35 LRLEKKKKK 9
+R+EKKKK+
Sbjct: 212 VRVEKKKKR 220
[245][TOP]
>UniRef100_A1XKA4 RNA polymerase beta chain (Fragment) n=1 Tax=Doryphora sassafras
RepID=A1XKA4_9MAGN
Length = 759
Score = 201 bits (510), Expect = 5e-50
Identities = 108/189 (57%), Positives = 129/189 (68%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+YPAI H+ + LAK+RRNRF+IPF QS QER+ EL+ G+S+EIPINGI N
Sbjct: 6 HWNFIYPAILHENCDLLAKKRRNRFIIPF--QSDQEREKELIRCSGISIEIPINGILRRN 63
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGITKY T IG+ DSI +KED I
Sbjct: 64 SILAYFDDPRYRRSSSGITKYGT---IGV---------------------DSIVKKEDLI 99
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYR KE PKYQ+KVD+ FFIPEEVH LP IMVRN S++G+ T I N RSRVGGL
Sbjct: 100 EYRRAKEFRPKYQMKVDRFFFIPEEVHFLPGFLPIMVRNKSIIGVDTRIALNTRSRVGGL 159
Query: 35 LRLEKKKKK 9
+R+E+KKKK
Sbjct: 160 VRVERKKKK 168
[246][TOP]
>UniRef100_B5AGZ9 DNA-directed RNA polymerase n=1 Tax=Gonystylus bancanus
RepID=B5AGZ9_9ROSI
Length = 1370
Score = 200 bits (509), Expect = 6e-50
Identities = 110/195 (56%), Positives = 133/195 (68%), Gaps = 4/195 (2%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYG--VSVEIPINGI 408
T H HF+Y + + LAKRRRNRF+IP QSIQE++ ELMP G +S+EIPINGI
Sbjct: 549 TGHYHFIYSTLLRENSYLLAKRRRNRFIIPV--QSIQEQEKELMPHSGSGISIEIPINGI 606
Query: 407 FHSNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEK 228
F NSI A+FDDPQYRR SSGITKY T +G H SI +K
Sbjct: 607 FRRNSILAFFDDPQYRRNSSGITKYGT---VGAH---------------------SIIKK 642
Query: 227 EDFIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSI--MVRNNSLVGIGTPITFNIR 54
ED IEY G+K+ PKYQ+KVD+ FFIPEEVHIL ESSSI MVRNNS++G+ T IT N R
Sbjct: 643 EDVIEYGGVKKFKPKYQMKVDRFFFIPEEVHILSESSSIIRMVRNNSIIGVNTQITLNTR 702
Query: 53 SRVGGLLRLEKKKKK 9
S+VGGL+R+E+ KK+
Sbjct: 703 SQVGGLVRVERNKKR 717
[247][TOP]
>UniRef100_A9XW50 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bixa orellana
RepID=A9XW50_BIXOR
Length = 1266
Score = 200 bits (509), Expect = 6e-50
Identities = 107/190 (56%), Positives = 132/190 (69%)
Frame = -1
Query: 581 TDHSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFH 402
T H + +Y AI H+ + L KRRRNRF+IPF QSIQE+ EL+P G+S+EIP+NGIFH
Sbjct: 522 TGHCNSLYSAIPHENSDLLGKRRRNRFIIPF--QSIQEQDKELIPQSGISIEIPMNGIFH 579
Query: 401 SNSIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKED 222
NSI A+FDD +YRR+SSGI KY T IG HSI +KE
Sbjct: 580 RNSILAFFDDLRYRRKSSGIIKYGT---IGAHSIVKKEG--------------------- 615
Query: 221 FIEYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVG 42
+EYRG+K++ PKYQ+KVD+ FFIPEEVHILPESS IMVRNNS++ T I NIRS+VG
Sbjct: 616 VVEYRGVKKVKPKYQMKVDRFFFIPEEVHILPESSYIMVRNNSIIRADTQIALNIRSQVG 675
Query: 41 GLLRLEKKKK 12
GL R+E+KKK
Sbjct: 676 GLARVERKKK 685
[248][TOP]
>UniRef100_A1XK26 RNA polymerase beta chain (Fragment) n=1 Tax=Potamogeton
berchtoldii RepID=A1XK26_9LILI
Length = 863
Score = 200 bits (509), Expect = 6e-50
Identities = 104/188 (55%), Positives = 128/188 (68%)
Frame = -1
Query: 575 HSHFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSN 396
H +F+ P+I + + LAKRRRNR +IP + +R+ EL+ +G+S+EIPINGI N
Sbjct: 106 HWNFLCPSILQENSSLLAKRRRNRLIIPLQYYD-PKREKELLLHFGISIEIPINGILRRN 164
Query: 395 SIFAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFI 216
SI AYFDDP+YRR SSGI KY T + DS+F+KED I
Sbjct: 165 SILAYFDDPRYRRSSSGIIKYGTI------------------------EADSVFKKEDLI 200
Query: 215 EYRGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
EYRG KE N KYQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+ T IT NIRSRVGGL
Sbjct: 201 EYRGTKEFNSKYQMKVDRFFFIPEEVHILPGSSFIMVRNNSIIGVNTQITLNIRSRVGGL 260
Query: 35 LRLEKKKK 12
+R+EKKKK
Sbjct: 261 VRVEKKKK 268
[249][TOP]
>UniRef100_A1XK59 RNA polymerase beta chain (Fragment) n=1 Tax=Hydrocharis
morsus-ranae RepID=A1XK59_HYDMO
Length = 815
Score = 200 bits (508), Expect = 8e-50
Identities = 103/186 (55%), Positives = 127/186 (68%)
Frame = -1
Query: 569 HFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSNSI 390
+F+YP+IF + + L K RRNRF+IP + +ER+ EL+P +G+S+EIP NGI NSI
Sbjct: 70 NFLYPSIFEENSDLLGKSRRNRFIIPLQYYD-KEREKELLPCFGISIEIPRNGILRRNSI 128
Query: 389 FAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFIEY 210
AY DDPQYRR SSGI KY T + DSI +KED IEY
Sbjct: 129 LAYCDDPQYRRSSSGIIKYGTV------------------------EVDSIVKKEDLIEY 164
Query: 209 RGIKELNPKYQIKVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLLR 30
RG K+ NPKYQ+KVD+ FFIPEEVHILP SS IMVRNNS++G+ T IT NIRSRV GL+R
Sbjct: 165 RGTKDFNPKYQMKVDRFFFIPEEVHILPGSSLIMVRNNSIIGVDTQITLNIRSRVSGLVR 224
Query: 29 LEKKKK 12
+E+KKK
Sbjct: 225 VERKKK 230
[250][TOP]
>UniRef100_A1XK90 RNA polymerase beta chain (Fragment) n=1 Tax=Tacca chantieri
RepID=A1XK90_TACCH
Length = 865
Score = 199 bits (507), Expect = 1e-49
Identities = 107/188 (56%), Positives = 129/188 (68%), Gaps = 2/188 (1%)
Frame = -1
Query: 569 HFMYPAIFHDTFNFLAKRRRNRFLIPFSFQSIQERKNELMPPYGVSVEIPINGIFHSNSI 390
+F+YP+I + FLAKRRRNRF+IP + QER+ EL P +G+S+EIPINGI H NSI
Sbjct: 105 NFIYPSILQENSYFLAKRRRNRFVIPLQYD--QEREKELKPCFGISIEIPINGILHRNSI 162
Query: 389 FAYFDDPQYRRQSSGITKYRTTIGIGIHSIFEKEDSIFEKEDSIFEKEDSIFEKEDFIEY 210
AYFDDP YRR SSGITK+ T K DSI +KED IEY
Sbjct: 163 LAYFDDPVYRRSSSGITKHGTI------------------------KVDSIVKKEDLIEY 198
Query: 209 RGIKELNPKYQI--KVDQIFFIPEEVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGL 36
RG +E + KYQI KVD+ FFIPEEV+I P SSSIMVRNNSL+G+ T +T N RSRVGGL
Sbjct: 199 RGTEEFSSKYQIQTKVDRFFFIPEEVYIFPGSSSIMVRNNSLIGVNTRLTLNTRSRVGGL 258
Query: 35 LRLEKKKK 12
+R+E+KKK
Sbjct: 259 VRVERKKK 266