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[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
RepID=UPI0000163E03
Length = 824
Score = 284 bits (727), Expect = 3e-75
Identities = 136/192 (70%), Positives = 158/192 (82%)
Frame = +1
Query: 1 FIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYPLLREQLE 180
FIVSTEPLKMGV GEHVPI+YG G+G LPTK WVL+FG+ S LKN GYLI+P+LR Q+E
Sbjct: 599 FIVSTEPLKMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIE 658
Query: 181 AGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQ 360
AGKR++FMSPAPYVANNAALIAFG+ K+L Q+DALVHYRN IPEST+GLEQYFDAP+P
Sbjct: 659 AGKRLVFMSPAPYVANNAALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQYFDAPLPT 718
Query: 361 ANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRYAV 540
A +G FYF +GETYAAL ++KE KVL YE PTL+LN AAKD VPCMVA ++ V
Sbjct: 719 ATIGTFYFANGETYAALCEYKEGKVLNYE-GFPTLILNEAAKDRKVPCMVATQAKTKFKV 777
Query: 541 YLACDNKMCPHH 576
LACD+ MCPHH
Sbjct: 778 SLACDSTMCPHH 789
[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
RepID=POL1_BRSV
Length = 2264
Score = 284 bits (727), Expect = 3e-75
Identities = 136/192 (70%), Positives = 158/192 (82%)
Frame = +1
Query: 1 FIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYPLLREQLE 180
FIVSTEPLKMGV GEHVPI+YG G+G LPTK WVL+FG+ S LKN GYLI+P+LR Q+E
Sbjct: 2039 FIVSTEPLKMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIE 2098
Query: 181 AGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQ 360
AGKR++FMSPAPYVANNAALIAFG+ K+L Q+DALVHYRN IPEST+GLEQYFDAP+P
Sbjct: 2099 AGKRLVFMSPAPYVANNAALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQYFDAPLPT 2158
Query: 361 ANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRYAV 540
A +G FYF +GETYAAL ++KE KVL YE PTL+LN AAKD VPCMVA ++ V
Sbjct: 2159 ATIGTFYFANGETYAALCEYKEGKVLNYE-GFPTLILNEAAKDRKVPCMVATQAKTKFKV 2217
Query: 541 YLACDNKMCPHH 576
LACD+ MCPHH
Sbjct: 2218 SLACDSTMCPHH 2229
[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
Length = 824
Score = 273 bits (697), Expect = 9e-72
Identities = 135/192 (70%), Positives = 157/192 (81%)
Frame = +1
Query: 1 FIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYPLLREQLE 180
FIVS +PLK GV GE+VPI +G GIG LPTK WV +FGK S LKN+KGYLI LLREQ+E
Sbjct: 599 FIVSNQPLKPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIE 658
Query: 181 AGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQ 360
AGKR+IFM PAPYVANNAALI+FGSA K+L Q+DAL HYRN IPEST+GLEQYFDAPIPQ
Sbjct: 659 AGKRLIFMGPAPYVANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQ 718
Query: 361 ANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRYAV 540
A+VG FYF DGETY AL ++K+ KVL YE LPT +LN+AAKD VPCMVA+ ++ V
Sbjct: 719 ASVGTFYFGDGETYTALCEYKDGKVLQYE-GLPTAILNQAAKDRKVPCMVARQWKSKFTV 777
Query: 541 YLACDNKMCPHH 576
+ACD+ MCPHH
Sbjct: 778 RMACDSNMCPHH 789
[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
RepID=POL1_TBRVM
Length = 2266
Score = 273 bits (697), Expect = 9e-72
Identities = 135/192 (70%), Positives = 157/192 (81%)
Frame = +1
Query: 1 FIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYPLLREQLE 180
FIVS +PLK GV GE+VPI +G GIG LPTK WV +FGK S LKN+KGYLI LLREQ+E
Sbjct: 2041 FIVSNQPLKPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIE 2100
Query: 181 AGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQ 360
AGKR+IFM PAPYVANNAALI+FGSA K+L Q+DAL HYRN IPEST+GLEQYFDAPIPQ
Sbjct: 2101 AGKRLIFMGPAPYVANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQ 2160
Query: 361 ANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRYAV 540
A+VG FYF DGETY AL ++K+ KVL YE LPT +LN+AAKD VPCMVA+ ++ V
Sbjct: 2161 ASVGTFYFGDGETYTALCEYKDGKVLQYE-GLPTAILNQAAKDRKVPCMVARQWKSKFTV 2219
Query: 541 YLACDNKMCPHH 576
+ACD+ MCPHH
Sbjct: 2220 RMACDSNMCPHH 2231
[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI00017F0C90
Length = 826
Score = 221 bits (563), Expect = 3e-56
Identities = 107/193 (55%), Positives = 132/193 (68%)
Frame = +1
Query: 1 FIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYPLLREQLE 180
F+VST P+K G G H+PIK GGG+G LPT WV NFG+ S LKN GY Y LL EQ+E
Sbjct: 598 FLVSTLPIKQGE-GVHIPIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIE 656
Query: 181 AGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQ 360
GKR++FMS APYVA NAALI+FGS+ K+L ++ L HYRN IPES GL YFDAP+P
Sbjct: 657 QGKRLVFMSAAPYVAGNAALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPA 716
Query: 361 ANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRYAV 540
A +G+ YF +GETYAAL +FK +VL +LN A + G VPC+ A G ++ V
Sbjct: 717 ATIGKSYFANGETYAALCEFKNGEVLDIVGPTNVQILNGAVRQGKVPCLAAHSVGTKFKV 776
Query: 541 YLACDNKMCPHHH 579
L C+ MCPHHH
Sbjct: 777 SLVCNKTMCPHHH 789
[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=POL1_GCMV
Length = 2252
Score = 221 bits (563), Expect = 3e-56
Identities = 107/193 (55%), Positives = 132/193 (68%)
Frame = +1
Query: 1 FIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYPLLREQLE 180
F+VST P+K G G H+PIK GGG+G LPT WV NFG+ S LKN GY Y LL EQ+E
Sbjct: 2024 FLVSTLPIKQGE-GVHIPIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIE 2082
Query: 181 AGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQ 360
GKR++FMS APYVA NAALI+FGS+ K+L ++ L HYRN IPES GL YFDAP+P
Sbjct: 2083 QGKRLVFMSAAPYVAGNAALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPA 2142
Query: 361 ANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRYAV 540
A +G+ YF +GETYAAL +FK +VL +LN A + G VPC+ A G ++ V
Sbjct: 2143 ATIGKSYFANGETYAALCEFKNGEVLDIVGPTNVQILNGAVRQGKVPCLAAHSVGTKFKV 2202
Query: 541 YLACDNKMCPHHH 579
L C+ MCPHHH
Sbjct: 2203 SLVCNKTMCPHHH 2215
[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=UPI00003FE52F
Length = 846
Score = 160 bits (405), Expect = 7e-38
Identities = 90/197 (45%), Positives = 117/197 (59%), Gaps = 6/197 (3%)
Frame = +1
Query: 4 IVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYPLLREQLEA 183
+VST PLK G G VP++ G GIG LPT WV F + + L +A GY I+ +R +E+
Sbjct: 607 LVSTTPLKQGESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIES 666
Query: 184 GKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQA 363
GK ++F S APYVA NAAL+AFG A KLL + AL YRN IPEST GLEQYFDA IPQA
Sbjct: 667 GKSLVFRSEAPYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPESTYGLEQYFDAAIPQA 726
Query: 364 NV-GQFYFVDGETYAALNDFKEAKVLGYEKELPTL-----MLNRAAKDGNVPCMVAQMKG 525
++ G FY + E+ + L + K V+G E L ++ + K G +P M A
Sbjct: 727 SLPGTFYLANAESESLLQEHKTGTVIGLTTEKFNLNGARDLIMQGQKLGKLPVMAATQAP 786
Query: 526 KRYAVYLACDNKMCPHH 576
++ V L C CP H
Sbjct: 787 NKFYVGLCCQKNFCPGH 803
[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=POL1_CNSV
Length = 2336
Score = 160 bits (405), Expect = 7e-38
Identities = 90/197 (45%), Positives = 117/197 (59%), Gaps = 6/197 (3%)
Frame = +1
Query: 4 IVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYPLLREQLEA 183
+VST PLK G G VP++ G GIG LPT WV F + + L +A GY I+ +R +E+
Sbjct: 2097 LVSTTPLKQGESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIES 2156
Query: 184 GKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQA 363
GK ++F S APYVA NAAL+AFG A KLL + AL YRN IPEST GLEQYFDA IPQA
Sbjct: 2157 GKSLVFRSEAPYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPESTYGLEQYFDAAIPQA 2216
Query: 364 NV-GQFYFVDGETYAALNDFKEAKVLGYEKELPTL-----MLNRAAKDGNVPCMVAQMKG 525
++ G FY + E+ + L + K V+G E L ++ + K G +P M A
Sbjct: 2217 SLPGTFYLANAESESLLQEHKTGTVIGLTTEKFNLNGARDLIMQGQKLGKLPVMAATQAP 2276
Query: 526 KRYAVYLACDNKMCPHH 576
++ V L C CP H
Sbjct: 2277 NKFYVGLCCQKNFCPGH 2293
[9][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID54_9SECO
Length = 1916
Score = 72.8 bits (177), Expect = 2e-11
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Frame = +1
Query: 1 FIVSTEPLKMG--VLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYPLLREQ 174
F+VST PL G H+P++ G G+GR+P+++WV F + +++ + +IY +
Sbjct: 1782 FVVSTLPLSRAEKFSGIHIPVECGDGLGRMPSQDWVRRFRR---IRHVQIRVIY----DA 1834
Query: 175 LEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQYF 342
AGK IIF APY+A A I+F A + + RD L Y N +++G+EQYF
Sbjct: 1835 YAAGKTIIFKDVAPYIAGWTAAISFACAQQ-YSYRDMLNRYNNVCTPNSSGIEQYF 1889