BB912029 ( RCE11226 )

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[1][TOP]
>UniRef100_Q2PEU3 Putative uncharacterized protein n=1 Tax=Trifolium pratense
           RepID=Q2PEU3_TRIPR
          Length = 553

 Score =  204 bits (518), Expect = 5e-51
 Identities = 88/169 (52%), Positives = 118/169 (69%)
 Frame = -3

Query: 509 RGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALACSCFWTWRNKELHENNFVRPSNMI 330
           R  FFM N+Q W+ +N++  AK   +  WC++WA AC CFWTWRNKE+H+  F RP   +
Sbjct: 295 RNTFFMENLQQWIYSNLSKGAKGRIDSAWCDYWATACHCFWTWRNKEIHDAEFTRPIYAM 354

Query: 329 YHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPVGNYVKLNTDGSCKEGKRAGCSGVI 150
            HV +    Y  A      +  ++ +L +I W+ P G+YVKLNTDG+CK+  R GC G+I
Sbjct: 355 QHVYRRVNDYYQANKTNRLMRIKNDMLVYISWKPPCGSYVKLNTDGACKDQNRGGCGGII 414

Query: 149 RGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLAKRLGFSTVELSIDS 3
           RG+QGEWLGGFA+G+G CSA +AELWGV EGL  A+RLGF+ VEL++DS
Sbjct: 415 RGSQGEWLGGFARGLGNCSAIIAELWGVAEGLSYARRLGFTAVELNVDS 463

[2][TOP]
>UniRef100_Q2HVE2 RNA-directed DNA polymerase (Reverse transcriptase); Polynucleotidyl
            transferase, Ribonuclease H fold n=1 Tax=Medicago
            truncatula RepID=Q2HVE2_MEDTR
          Length = 729

 Score =  125 bits (314), Expect = 2e-27
 Identities = 66/194 (34%), Positives = 100/194 (51%), Gaps = 1/194 (0%)
 Frame = -3

Query: 581  TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
            T++H LRDC    Q W +++P+     FF  + + WV NN+N      +   W   +   
Sbjct: 514  TVIHVLRDCVHSTQVWLRLIPHNYITNFFSFDCREWVFNNLNKKGIGDNPATWQTTFMTT 573

Query: 401  CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPV 222
            C   W WRNK + E  F RPSN    + K      +    + K   + + + +I W +P 
Sbjct: 574  CWYLWNWRNKSIFEIGFQRPSNPTLVIQKFTREIEDNTKLVHKSSHQKETI-YIGWMRPP 632

Query: 221  GNYVKLNTDGSCK-EGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLA 45
              +VKLN DG+ K  G  AGC G++R + G W+ G+ K +G C AF AE+WG+  GL +A
Sbjct: 633  FGWVKLNCDGAWKGSGTLAGCGGLLRDSDGRWIKGYFKKIGMCDAFHAEMWGMYLGLDMA 692

Query: 44   KRLGFSTVELSIDS 3
             R   +T  L ++S
Sbjct: 693  WR--ENTTHLIVES 704

[3][TOP]
>UniRef100_A2Q568 Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago
           truncatula RepID=A2Q568_MEDTR
          Length = 275

 Score =  123 bits (308), Expect = 1e-26
 Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 2/190 (1%)
 Frame = -3

Query: 566 LRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALACSCFW 387
           L DCSL    W  ++  E R  F++ N+Q W++  +     +     W   W  +C   W
Sbjct: 23  LHDCSLAKSIWCNLLKIEARANFYVENLQGWIHMKLYHKLGMDGAESWVCVWEASCHFLW 82

Query: 386 TWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDK--VLSHIQWQQPVGNY 213
            W N+E+H +  VR          L   +RN  +    VG   K  V   + W++P G +
Sbjct: 83  MWHNREVHGDARVR----------LSHPWRNKQADDSIVGGHTKHRVEVDVMWKKPEGGW 132

Query: 212 VKLNTDGSCKEGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLAKRLG 33
           ++LNTD + K     G  G+ R  +G+W+ GF+  + +C+A+++EL GV +GL +A+  G
Sbjct: 133 IRLNTDVASKRDIPTGSGGLFRNAEGKWISGFSHNLSRCNAYLSELCGVFDGLQIARERG 192

Query: 32  FSTVELSIDS 3
           FS VEL +DS
Sbjct: 193 FSKVELHVDS 202

[4][TOP]
>UniRef100_O82276 Putative non-LTR retroelement reverse transcriptase n=1
            Tax=Arabidopsis thaliana RepID=O82276_ARATH
          Length = 1231

 Score =  112 bits (280), Expect = 2e-23
 Identities = 63/193 (32%), Positives = 96/193 (49%), Gaps = 1/193 (0%)
 Frame = -3

Query: 581  TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
            TILH LRDC  +   W++++P      FF  ++  W+  N++ +     +G W   + + 
Sbjct: 953  TILHVLRDCPAMEPIWRRLLPLRRHHEFFSQSLLEWLFTNMDPV-----KGIWPTLFGMG 1007

Query: 401  CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPV 222
                W WR  ++     +    + +  +   E  R  + A+       +V   I+WQ P 
Sbjct: 1008 IWWAWKWRCCDVFGERKICRDRLKFIKDMAEEVRRVHVGAVGNRPNGVRVERMIRWQVPS 1067

Query: 221  GNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLA 45
              +VK+ TDG+ +     A   G IR  QGEWLGGFA  +G C+A +AELWG   GLL+A
Sbjct: 1068 DGWVKITTDGASRGNHGLAAAGGAIRNGQGEWLGGFALNIGSCAAPLAELWGAYYGLLIA 1127

Query: 44   KRLGFSTVELSID 6
               GF  VEL +D
Sbjct: 1128 WDKGFRRVELDLD 1140

[5][TOP]
>UniRef100_O80790 Putative non-LTR retroelement reverse transcriptase n=1
            Tax=Arabidopsis thaliana RepID=O80790_ARATH
          Length = 970

 Score =  109 bits (272), Expect = 2e-22
 Identities = 68/196 (34%), Positives = 104/196 (53%), Gaps = 3/196 (1%)
 Frame = -3

Query: 581  TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
            +ILH LRDC  +   WQ+++P   +  FF S  + W+  N++      ++G W   +++ 
Sbjct: 694  SILHVLRDCPAMTPIWQRLLPQRRQNEFF-SQFE-WLFTNLD-----PAKGDWPTLFSMG 746

Query: 401  CSCFWTWRNKELH-ENNFVRPSNMIYHVNKLGETYRNA-MSAMEKVGQRDKVLSHIQWQQ 228
                W WR  ++  E    R  + +  +  + E  R A +  +    +R +V   I+W+ 
Sbjct: 747  IWWAWKWRCGDVFGERKLCR--DRLKFIKDIAEEVRKAHVGTLNNHVKRARVERMIRWKA 804

Query: 227  PVGNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLL 51
            P   +VKL TDG+ +  +  A  SG I   QGEWLGGFA  +G C A +AELWG   GLL
Sbjct: 805  PSDRWVKLTTDGASRGHQGLAAASGAILNLQGEWLGGFALNIGSCDAPLAELWGAYYGLL 864

Query: 50   LAKRLGFSTVELSIDS 3
            +A   GF  VEL++DS
Sbjct: 865  IAWDKGFRRVELNLDS 880

[6][TOP]
>UniRef100_Q9SJZ8 Putative non-LTR retroelement reverse transcriptase n=1
           Tax=Arabidopsis thaliana RepID=Q9SJZ8_ARATH
          Length = 321

 Score =  105 bits (263), Expect = 2e-21
 Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 2/195 (1%)
 Frame = -3

Query: 581 TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
           TILH LRDC  +   W ++VP +    FF +++  W+  N+         G W   + +A
Sbjct: 44  TILHVLRDCPAMAGIWSRLVPRDQIRQFFTASLLEWIYKNLR------ERGSWPTVFVMA 97

Query: 401 CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQR-DKVLSHIQWQQP 225
               W WR   +   N  +  + +  +  L E    A + ++    R  +V   + W  P
Sbjct: 98  VWWGWKWRCGNIFGGNG-KCRDRVKFIKDLAEEVAIANAFVKGNEVRVSRVERLVSWVSP 156

Query: 224 VGNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLL 48
              +VKLNTDG+ +     A   GV+R + G W+GGFA  +G CSA +AELWGV  GL +
Sbjct: 157 EDGWVKLNTDGASRGNPGFATAGGVLRDHNGAWIGGFAVNIGVCSAPLAELWGVYYGLFI 216

Query: 47  AKRLGFSTVELSIDS 3
           A   G   VEL +DS
Sbjct: 217 AWGRGARRVELEVDS 231

[7][TOP]
>UniRef100_B2BXY8 Non-LTR retrotransposon transposase n=1 Tax=Arabidopsis cebennensis
            RepID=B2BXY8_9BRAS
          Length = 799

 Score =  101 bits (252), Expect = 4e-20
 Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 1/194 (0%)
 Frame = -3

Query: 581  TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
            TI+H LRDC  +   W +++P   RG FF   +  WV +N+    K+      C  W   
Sbjct: 517  TIIHILRDCPAMYGIWTRIIPRRKRGTFFTQTLLEWVYDNLGDSGKVDGCPWSCVRWG-- 574

Query: 401  CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPV 222
                W WR   +   N      + +  ++  E  +  +        R ++   + W +P 
Sbjct: 575  ----WKWRCGNVFGVNGKCRDMVKFVRDRASEVIQAHLVEGNSGKIRGRIERMVSWVKPA 630

Query: 221  GNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLA 45
              ++KLNTDG+ K     A   G++R   G W+GGFA  +G CSA +AELW V  GL +A
Sbjct: 631  EGWLKLNTDGASKGNPGLATAGGILRQQDGSWIGGFAVNIGICSAPLAELWRVYYGLYIA 690

Query: 44   KRLGFSTVELSIDS 3
                 + +E+ +DS
Sbjct: 691  WERKITRLEVEVDS 704

[8][TOP]
>UniRef100_Q9ZUY7 Putative reverse transcriptase n=1 Tax=Arabidopsis thaliana
           RepID=Q9ZUY7_ARATH
          Length = 314

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 67/199 (33%), Positives = 94/199 (47%), Gaps = 6/199 (3%)
 Frame = -3

Query: 581 TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
           TI+H LRDC  +   W ++VP   R  FF  ++  W+  N+    K + E  W   +AL+
Sbjct: 31  TIIHILRDCPAMEGIWIRLVPAGKRREFFTQSLLEWLFANLGDRRK-TCESTWSTLFALS 89

Query: 401 CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKV-----GQRDKVLSHIQ 237
               W WR      N F         V  L +  R    A   V     G  ++V   I 
Sbjct: 90  IWWAWKWRCG----NIFGVQDKCRDRVRFLKDLARETSMAHVIVRTLSGGHGERVERLIA 145

Query: 236 WQQPVGNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLE 60
           W +P   + KLNTDG+ +     A   GV+R  +G W GGFA  +G CSA +AELWGV  
Sbjct: 146 WSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYY 205

Query: 59  GLLLAKRLGFSTVELSIDS 3
           GL +A     + +E+ +DS
Sbjct: 206 GLYIAWERRVTRLEIEVDS 224

[9][TOP]
>UniRef100_Q1PEZ4 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
           RepID=Q1PEZ4_ARATH
          Length = 314

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 67/199 (33%), Positives = 94/199 (47%), Gaps = 6/199 (3%)
 Frame = -3

Query: 581 TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
           TI+H LRDC  +   W ++VP   R  FF  ++  W+  N+    K + E  W   +AL+
Sbjct: 31  TIIHILRDCPAMEGIWIRLVPAGKRREFFTQSLLEWLFANLGDRRK-TCESTWSTLFALS 89

Query: 401 CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKV-----GQRDKVLSHIQ 237
               W WR      N F         V  L +  R    A   V     G  ++V   I 
Sbjct: 90  IWWAWKWRCG----NIFGVQDKCRDRVRFLKDLARETSMAHVIVRTLSGGHGERVERLIA 145

Query: 236 WQQPVGNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLE 60
           W +P   + KLNTDG+ +     A   GV+R  +G W GGFA  +G CSA +AELWGV  
Sbjct: 146 WSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYY 205

Query: 59  GLLLAKRLGFSTVELSIDS 3
           GL +A     + +E+ +DS
Sbjct: 206 GLYIAWERRVTRLEIEVDS 224

[10][TOP]
>UniRef100_A0MEQ4 Putative uncharacterized protein (Fragment) n=1 Tax=Arabidopsis
           thaliana RepID=A0MEQ4_ARATH
          Length = 315

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 67/199 (33%), Positives = 94/199 (47%), Gaps = 6/199 (3%)
 Frame = -3

Query: 581 TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
           TI+H LRDC  +   W ++VP   R  FF  ++  W+  N+    K + E  W   +AL+
Sbjct: 31  TIIHILRDCXAMEGIWIRLVPAGKRREFFTQSLLEWLFANLGDRRK-TCESTWSTLFALS 89

Query: 401 CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKV-----GQRDKVLSHIQ 237
               W WR      N F         V  L +  R    A   V     G  ++V   I 
Sbjct: 90  IWWAWKWRCG----NIFGVQDKCRDRVRFLKDLARETSMAHVIVRTLSGGHGERVERLIA 145

Query: 236 WQQPVGNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLE 60
           W +P   + KLNTDG+ +     A   GV+R  +G W GGFA  +G CSA +AELWGV  
Sbjct: 146 WSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYY 205

Query: 59  GLLLAKRLGFSTVELSIDS 3
           GL +A     + +E+ +DS
Sbjct: 206 GLYIAWERRVTRLEIEVDS 224

[11][TOP]
>UniRef100_Q9LDL8 Putative uncharacterized protein AT4g08830 n=1 Tax=Arabidopsis
            thaliana RepID=Q9LDL8_ARATH
          Length = 947

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
 Frame = -3

Query: 581  TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
            TILH L+DC  +   W+++V  +    FF  ++  W+  N+  +    +   W   +A+ 
Sbjct: 727  TILHVLKDCPSIAGIWRRLVQVQRSYDFFNGSLFGWLYVNLG-MKNAETGYAWATLFAIV 785

Query: 401  CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPV 222
                W WR   +          + +  +   E         +  G R +V   + W+ P 
Sbjct: 786  VWWSWKWRCGYVFGEVGKCRDRVKFFRDLAAEVSHAHAIHSQNGGLRTRVERLVAWKPPD 845

Query: 221  GNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLA 45
            G +VKLNTDG+ +     A   GV+R   G W GGFA  +G CSA +AELWGV  GL +A
Sbjct: 846  GEWVKLNTDGASRGNLGLATTGGVLRDGIGHWCGGFALDIGVCSAPLAELWGVYYGLYMA 905

Query: 44   KRLGFSTVELSIDS 3
                F+ VEL +DS
Sbjct: 906  WERRFTRVELEVDS 919

[12][TOP]
>UniRef100_Q9FG26 Non-LTR retroelement reverse transcriptase-like n=1 Tax=Arabidopsis
           thaliana RepID=Q9FG26_ARATH
          Length = 676

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 2/195 (1%)
 Frame = -3

Query: 581 TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGR-WCNFWAL 405
           +++H LRDC  +   W +VVP   +  FF +++  W+  N+    +  SE R W   +AL
Sbjct: 394 SLIHVLRDCPAMMGIWMRVVPVMEQRRFFETSLLEWMYGNLK--ERSDSERRSWPTLFAL 451

Query: 404 ACSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQP 225
                W WR   +   +      + +  + + E     ++A     +   V   I W++P
Sbjct: 452 TVWWGWKWRCGYVFGEDSRCRDRVKFLKSAVAEVEAAHLAANGDAREDVLVERMIAWRKP 511

Query: 224 VGNYVKLNTDGSCKEGK-RAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLL 48
              +V +NTDG+      +A   GVIR   G WL GFA  +G CSA +AELWGV  GL++
Sbjct: 512 AEGWVTMNTDGASHGNPGQATAGGVIRDEHGSWLVGFALNIGVCSAPLAELWGVYYGLVV 571

Query: 47  AKRLGFSTVELSIDS 3
           A   G+  V L +DS
Sbjct: 572 AWERGWRRVRLEVDS 586

[13][TOP]
>UniRef100_UPI0000162802 nucleic acid binding / ribonuclease H n=1 Tax=Arabidopsis thaliana
           RepID=UPI0000162802
          Length = 258

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 1/194 (0%)
 Frame = -3

Query: 581 TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
           ++LH  RDC      W + VP   +  FF  ++  W+ +N+ C      +  W   +A+ 
Sbjct: 26  SVLHVFRDCPAQLGIWVRFVPRRRQQGFFSKSLFEWLYDNL-CDRSSCEDIPWSTIFAVI 84

Query: 401 CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPV 222
               W WR   +   N      + +    + E YR  +        + +V   I W  P 
Sbjct: 85  IWWGWKWRCSNIFGENTKCRDRVKFVKEWVVEVYRAHLGNALVGSTQPRVERLIGWVLPC 144

Query: 221 GNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLA 45
             +VK+NTDG+ +     A   GV+R  +G W GGF+  +G+CSA  AELWGV  GL  A
Sbjct: 145 VGWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRCSAQHAELWGVYYGLYFA 204

Query: 44  KRLGFSTVELSIDS 3
                  VEL +DS
Sbjct: 205 WEKKVPRVELEVDS 218

[14][TOP]
>UniRef100_Q9FMM8 Non-LTR retroelement reverse transcriptase-like protein n=1
           Tax=Arabidopsis thaliana RepID=Q9FMM8_ARATH
          Length = 308

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 1/194 (0%)
 Frame = -3

Query: 581 TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
           ++LH  RDC      W + VP   +  FF  ++  W+ +N+ C      +  W   +A+ 
Sbjct: 26  SVLHVFRDCPAQLGIWVRFVPRRRQQGFFSKSLFEWLYDNL-CDRSSCEDIPWSTIFAVI 84

Query: 401 CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPV 222
               W WR   +   N      + +    + E YR  +        + +V   I W  P 
Sbjct: 85  IWWGWKWRCSNIFGENTKCRDRVKFVKEWVVEVYRAHLGNALVGSTQPRVERLIGWVLPC 144

Query: 221 GNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLA 45
             +VK+NTDG+ +     A   GV+R  +G W GGF+  +G+CSA  AELWGV  GL  A
Sbjct: 145 VGWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRCSAQHAELWGVYYGLYFA 204

Query: 44  KRLGFSTVELSIDS 3
                  VEL +DS
Sbjct: 205 WEKKVPRVELEVDS 218

[15][TOP]
>UniRef100_Q1SN20 Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago
           truncatula RepID=Q1SN20_MEDTR
          Length = 282

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 50/134 (37%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = -3

Query: 401 CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPV 222
           C   W WRNK + E  F RPSN    + K      +    + K   + + + +I W +P 
Sbjct: 127 CWYLWNWRNKSIFEIGFQRPSNPTLVIQKFTREIEDNTKLVHKSSHQKETI-YIGWMRPP 185

Query: 221 GNYVKLNTDGSCK-EGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLA 45
             +VKLN DG+ K  G  AGC G++R + G W+ G+ K +G C AF AE+WG+  GL +A
Sbjct: 186 FGWVKLNCDGAWKASGTFAGCGGLLRDSDGRWIKGYFKKIGMCDAFHAEMWGMYLGLDMA 245

Query: 44  KRLGFSTVELSIDS 3
            R   +T  L +DS
Sbjct: 246 WR--ENTTHLIVDS 257

[16][TOP]
>UniRef100_Q2HU20 Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HU20_MEDTR
          Length = 220

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
 Frame = -3

Query: 383 WRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPVGNYVKL 204
           WRNK + E +F+RP+N I  + +  +   +       +G++ K + +I W++P    +KL
Sbjct: 3   WRNKTIFEADFIRPNNPISLIWRFVQNIEDCNLEHVHIGRKLKEIIYIGWKRPREGLIKL 62

Query: 203 NTDGSCKE-GKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLAKRLGFS 27
           N+DG+CK+ G  AGC G+ R   G W+ G+ K +G C A  AE+WG+  GL +A R  +S
Sbjct: 63  NSDGACKDMGVIAGCGGLFRDLDGRWIKGYTKKIGACDALHAEMWGLYLGLDMAWREHYS 122

Query: 26  TVELSIDS 3
            + +  DS
Sbjct: 123 HLIVESDS 130

[17][TOP]
>UniRef100_Q2HX37 LINE-type retrotransposon LIb DNA, complete sequence, Insertion at
            the S14 site n=1 Tax=Ipomoea batatas RepID=Q2HX37_IPOBA
          Length = 1366

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
 Frame = -3

Query: 581  TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
            T+ H  R C L    W   VP          ++  W+    +   K      W   +   
Sbjct: 1087 TLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYSTNWSLIFPYI 1146

Query: 401  CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPV 222
                W  RN+ + +NN   PS+++       E+        ++ G +    + + W  P 
Sbjct: 1147 LWNLWKARNRLVFDNNITAPSDILNR--SFMESSEARCLLAKRTGLQTAFQTWVVWSPPA 1204

Query: 221  GNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLA 45
              + KLN+DG+CK     A   G++R   G W+ G+   +G  ++F+AELWG+ EGLLLA
Sbjct: 1205 AGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLA 1264

Query: 44   KRLGFSTVELSIDS 3
            K  GF+ +    DS
Sbjct: 1265 KNRGFTKLIAETDS 1278

[18][TOP]
>UniRef100_Q2HX35 LINE-type retrotransposon LIb DNA, complete sequence, Insertion at
            the S11 site n=1 Tax=Ipomoea batatas RepID=Q2HX35_IPOBA
          Length = 1898

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
 Frame = -3

Query: 581  TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
            T+ H  R C L    W   VP          ++  W+    +   K      W   +   
Sbjct: 1619 TLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYGTNWSLIFPYI 1678

Query: 401  CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPV 222
                W  RN+ + +NN   PS+++       E+        ++ G +    + + W  P 
Sbjct: 1679 LWNLWKARNRLVFDNNITAPSDILNR--SFMESSEARCLLAKRTGLQTAFQTWVVWSPPA 1736

Query: 221  GNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLA 45
              + KLN+DG+CK     A   G++R   G W+ G+   +G  ++F+AELWG+ EGLLLA
Sbjct: 1737 AGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLA 1796

Query: 44   KRLGFSTVELSIDS 3
            K  GF+ +    DS
Sbjct: 1797 KNRGFTKLIAETDS 1810

[19][TOP]
>UniRef100_P0C2F6 Putative ribonuclease H protein At1g65750 n=1 Tax=Arabidopsis
           thaliana RepID=RNHX1_ARATH
          Length = 620

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 64/195 (32%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
 Frame = -3

Query: 581 TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
           ++LH LRDC      W +VVP   +  FF  ++  W+ +N+   +    +  W   +A+ 
Sbjct: 338 SMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEWLYDNLGDRSGCE-DIPWSTIFAVI 396

Query: 401 CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVG-QRDKVLSHIQWQQP 225
               W WR   +   N      + +      E YR A S    VG  + +V   I W  P
Sbjct: 397 IWWGWKWRCGNIFGENTKCRDRVKFVKEWAVEVYR-AHSGNVLVGITQPRVERMIGWVSP 455

Query: 224 VGNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLL 48
              +VK+NTDG+ +     A   GV+R   G W GGF+  +G+CSA  AELWGV  GL  
Sbjct: 456 CVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLYF 515

Query: 47  AKRLGFSTVELSIDS 3
           A       VEL +DS
Sbjct: 516 AWEKKVPRVELEVDS 530

[20][TOP]
>UniRef100_Q2HX34 LINE-type retrotransposon LIb DNA, complete sequence, Insertion at
            the SCL6 site n=1 Tax=Ipomoea batatas RepID=Q2HX34_IPOBA
          Length = 1366

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
 Frame = -3

Query: 581  TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
            T+ H  R C L    W   VP          ++  W+    +   K      W   +   
Sbjct: 1087 TLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYGTNWSLIFPYI 1146

Query: 401  CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPV 222
                W  RN+ + +NN   PS+++       E+        ++ G +    + + W  P 
Sbjct: 1147 LWNLWKARNRLVFDNNITAPSDILNR--SFMESSEARCLLAKRTGLQTAFQTWVVWSPPA 1204

Query: 221  GNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLA 45
              + KLN+DG+CK     A   G++R   G W+ G+   +G  ++F+AELWG+ EGLLLA
Sbjct: 1205 AGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYICNIGTANSFLAELWGLREGLLLA 1264

Query: 44   KRLGFSTVELSIDS 3
            K  GF+ +    DS
Sbjct: 1265 KNRGFTKLIAETDS 1278

[21][TOP]
>UniRef100_Q2HRR4 Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HRR4_MEDTR
          Length = 302

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
 Frame = -3

Query: 353 FVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPVGNYVKLNTDGSCK-EG 177
           F  P+N  Y +          +    +     K + +I W++P+  +VKLN DG+CK  G
Sbjct: 163 FQIPNNPTYVIQNFIRAIEEVVQDHLQKNPHHKEIVYIDWKRPLDGWVKLNCDGACKGNG 222

Query: 176 KRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLAKRLGFSTVELSIDS 3
           + AGC G++R + G W+ GF++ +G C A  AE+WG+  GL +A R G S + +  DS
Sbjct: 223 ELAGCGGLLRQSDGTWIKGFSRKIGACDALHAEMWGLYLGLDMAWREGISHLIVESDS 280

[22][TOP]
>UniRef100_Q9LQJ0 F28G4.15 protein n=1 Tax=Arabidopsis thaliana RepID=Q9LQJ0_ARATH
          Length = 272

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 12/190 (6%)
 Frame = -3

Query: 536 WQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALACSCFWTWR------- 378
           W +++P      FF  ++  W+  N+    +I+    W   ++ A    W WR       
Sbjct: 5   WTRLLPVRRLSSFFSKSLLEWIYANLGEEIEING-CPWAVTFSQAIWWGWKWRYGNIFGE 63

Query: 377 NKELHEN-NFVRPSNMIY---HVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPVGNYV 210
           NK+  +   F++   +     HV+K+G T R A         R++ L  I W  P   + 
Sbjct: 64  NKKCRDRVRFIKDRALDVWKAHVHKMGVTTRTA---------REERL--IAWSPPRVGWF 112

Query: 209 KLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLAKRLG 33
           KLNTDG+ +   R A   GV+R   G W  GF+  +G CSA +AELWG   GL +A   G
Sbjct: 113 KLNTDGASRGNPRLATAGGVVRDGDGNWCYGFSLNIGICSAPLAELWGAYYGLNIAWERG 172

Query: 32  FSTVELSIDS 3
            + +E+ IDS
Sbjct: 173 VTQLEMEIDS 182

[23][TOP]
>UniRef100_Q9LP05 F9C16.13 n=1 Tax=Arabidopsis thaliana RepID=Q9LP05_ARATH
          Length = 1172

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 1/178 (0%)
 Frame = -3

Query: 581 TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
           TILH L+DC  +   W Q++P   R +FF  ++  W+ +N+    + + E  W   + +A
Sbjct: 123 TILHMLQDCPAMAGLWNQIIPRRRRRLFFEQSLIEWLYSNLGDDQE-TYESVWSTVFTMA 181

Query: 401 CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPV 222
               W WR     +N F                            +R K    ++  +  
Sbjct: 182 VWWAWKWRC----DNEF---------------------------DKRGKCRDRMRLIKEA 210

Query: 221 GNYVKLNTDGSCKEGKRAGCSG-VIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLL 51
              +KLNTDG+ +       +G V+R  +GEWLGGF+  +G+ +A VAELW ++ G L
Sbjct: 211 AKELKLNTDGASRGNPALSTAGGVLRDREGEWLGGFSLNIGRRTAPVAELWALVVGFL 268

[24][TOP]
>UniRef100_B9HV70 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HV70_POPTR
          Length = 245

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
 Frame = -3

Query: 269 GQRDKVLSHIQWQQPVGNYVKLNTDGSCKEGKR--AGCSGVIRGNQGEWLGGFAKGVGQC 96
           G+  K  + + W+ P    +KLN DG C +G    AG  GVIR + G W+GGFA+ +G C
Sbjct: 65  GRSSKEDTQVGWKYPQEERIKLNVDG-CSKGNPGVAGAGGVIRDHLGAWIGGFARNIGIC 123

Query: 95  SAFVAELWGVLEGLLLAKRLGFSTVELSIDS 3
           S+  AELW V  GL LA   GF  V+L  DS
Sbjct: 124 SSVNAELWAVYVGLQLAWDRGFRKVDLESDS 154

[25][TOP]
>UniRef100_B9HFN7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HFN7_POPTR
          Length = 245

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
 Frame = -3

Query: 269 GQRDKVLSHIQWQQPVGNYVKLNTDGSCKEGKR--AGCSGVIRGNQGEWLGGFAKGVGQC 96
           G+  K  + + W+ P    +KLN DG C +G    AG  GVIR + G W+GGFA+ +G C
Sbjct: 65  GRSSKEDTQVGWKYPQEERIKLNVDG-CSKGNPGVAGAGGVIRDHLGAWIGGFARNIGIC 123

Query: 95  SAFVAELWGVLEGLLLAKRLGFSTVELSIDS 3
           S+  AELW V  GL LA   GF  V+L  DS
Sbjct: 124 SSVNAELWAVYVGLQLAWDRGFRKVDLESDS 154

[26][TOP]
>UniRef100_B9RR14 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9RR14_RICCO
          Length = 283

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 3/196 (1%)
 Frame = -3

Query: 581 TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQV--WVNNNINCIAKISSEGRWCNFWA 408
           +++HALRDC L  Q W+ ++ +        SN+ V  WV  N+N  +K      W   +A
Sbjct: 32  SVIHALRDCGLAKQVWEHLLSFN--AFVSQSNLSVDDWVRFNLNPRSKFDGF-EWNVVFA 88

Query: 407 LACSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQ 228
            +    W WR+        V+ + +I+              +   +    K L H+ W  
Sbjct: 89  WSQWWIWKWRD--------VKAAFLIH--------------SKVAIPSAAKELRHVSWIP 126

Query: 227 PVGNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLL 51
           P   + KLN DG CK+ +R AG  G+IR + G                 AELW VL+GL+
Sbjct: 127 PGEGWFKLNADGCCKQVRRIAGGGGIIRDSIG---------------MGAELWAVLQGLI 171

Query: 50  LAKRLGFSTVELSIDS 3
           LA   GF  + + +DS
Sbjct: 172 LAWNNGFHKLLVEVDS 187

[27][TOP]
>UniRef100_Q9SI81 F23N19.5 n=1 Tax=Arabidopsis thaliana RepID=Q9SI81_ARATH
          Length = 233

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
 Frame = -3

Query: 413 WALACSCFWTWR---NKELHENNFVRP--------SNMIYHVNKLGETYRNAMSAMEKVG 267
           + +   C+W W+        EN   R         +  +   N  G    N+ S ME+  
Sbjct: 4   YGMVSPCWWGWKWRCGNVFGENRKCRDRVKLVKDIAQEVAKANNCGSGSNNSRSRMER-- 61

Query: 266 QRDKVLSHIQWQQPVGNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSA 90
                   ++W +P   + KLNTDG+       A   G +R   GEW  GFA  +G+C A
Sbjct: 62  -------QVRWSKPSLGWCKLNTDGASHGNPGLATAGGALRNEYGEWCFGFALNIGRCLA 114

Query: 89  FVAELWGVLEGLLLAKRLGFSTVELSIDS 3
            +AELWGV  GL +A   G + +EL +DS
Sbjct: 115 PLAELWGVYYGLFMAWDRGITRLELEVDS 143

[28][TOP]
>UniRef100_A2Q3D6 Ribonuclease H n=1 Tax=Medicago truncatula RepID=A2Q3D6_MEDTR
          Length = 97

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 37/65 (56%), Positives = 45/65 (69%)
 Frame = -3

Query: 197 DGSCKEGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLAKRLGFSTVE 18
           DG+ K    AGC GV+RG+ GE + GF+KG+G  SA+VAELWGV E L  A   GF TVE
Sbjct: 2   DGASKGEGIAGCGGVLRGDSGECICGFSKGLGAYSAYVAELWGVFEDLKFALSHGFLTVE 61

Query: 17  LSIDS 3
           L +DS
Sbjct: 62  LHVDS 66

[29][TOP]
>UniRef100_Q9LNS0 F1L3.4 n=1 Tax=Arabidopsis thaliana RepID=Q9LNS0_ARATH
          Length = 253

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
 Frame = -3

Query: 425 WCNFWALACSCFWTWR-------NKELHEN-NFVRPSNMIY---HVNKLGETYRNAMSAM 279
           W   ++ A    W WR       NK+  +   F++   +     HV+K+G T R A    
Sbjct: 22  WAVTFSQAIWWGWKWRYGNIFGENKKCRDRVRFIKDRALDVWKAHVHKMGVTTRTA---- 77

Query: 278 EKVGQRDKVLSHIQWQQPVGNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVG 102
                R++ L  I W  P   + KLNTDG+ +   R A   GV+R   G W  GF+  +G
Sbjct: 78  -----REERL--IAWSPPRVGWFKLNTDGASRGNPRLATAGGVVRDGDGNWCYGFSLNIG 130

Query: 101 QCSAFVAELWGVLEGLLLAKRLGFSTVELSIDS 3
            CSA +AELWG   GL +A   G + +E+ IDS
Sbjct: 131 ICSAPLAELWGAYYGLNIAWERGVTQLEMEIDS 163

[30][TOP]
>UniRef100_B9IKN0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IKN0_POPTR
          Length = 245

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
 Frame = -3

Query: 269 GQRDKVLSHIQWQQPVGNYVKLNTDGSCKEGKR--AGCSGVIRGNQGEWLGGFAKGVGQC 96
           G+  K  + + W+ P    +KLN DG C +G    AG  GVIR + G W+GGFA+ +  C
Sbjct: 65  GRSSKEDTQVGWKYPQEERIKLNVDG-CSKGNPGVAGAGGVIREHLGAWIGGFARNIDIC 123

Query: 95  SAFVAELWGVLEGLLLAKRLGFSTVELSIDS 3
           S+  AELW V  GL LA   GF  V+L  DS
Sbjct: 124 SSVNAELWAVYVGLQLAWDRGFRKVDLESDS 154

[31][TOP]
>UniRef100_B9RYP9 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9RYP9_RICCO
          Length = 186

 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
 Frame = -3

Query: 236 WQQPVGNYVKLNTDGSCKEGKRAG-CSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLE 60
           W  P  ++ KLNTDG   +    G   G+IR   G W+ GF+  +  CS   AELWGV +
Sbjct: 37  WNPPPSSFFKLNTDGVVHQSSGHGYVGGLIRDTNGRWVAGFSINISLCSITCAELWGVYQ 96

Query: 59  GLLLAKRLGFSTVELSIDS 3
           GL+LA RLG   + + +DS
Sbjct: 97  GLMLANRLGIVNLMVEVDS 115

[32][TOP]
>UniRef100_B9RHM3 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9RHM3_RICCO
          Length = 213

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
 Frame = -3

Query: 383 WRNKELHENNFVRPSNMIYHVNKLGETYRNAMSA--MEKVGQRDKVLSHIQWQQPVGNYV 210
           WRN+ + E+      + I  + + G     A+S       G  +    H+ W+ P    +
Sbjct: 84  WRNRRIFEDGQAFQEDPIVFILRQGAESEKALSLKHFSHPGNGNLRTQHLCWKPPPDGTM 143

Query: 209 KLNTDGSCKEGKRAGCSG-VIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLAKRLG 33
           K+NTDG          SG VI+  QG W+ GF   +  C++  AELW  + GL +A  +G
Sbjct: 144 KVNTDGERSIASGVASSGDVIKNAQGAWIAGFRHRISCCTSLCAELWATITGLEMAILMG 203

Query: 32  FSTVEL 15
           F  ++L
Sbjct: 204 FKNIQL 209

[33][TOP]
>UniRef100_B9SWE6 Nuclease, putative n=1 Tax=Ricinus communis RepID=B9SWE6_RICCO
          Length = 219

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
 Frame = -3

Query: 257 KVLSHIQWQQPVGNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQC-SAFV 84
           KVL  + W  P   + K+NTDG+ K+    A  +G+ R   G+W GGFA  +  C SAFV
Sbjct: 39  KVLKMVGWIPPPQGWFKINTDGTWKKSSGIATAAGLFRNCNGQWCGGFAIKLRDCYSAFV 98

Query: 83  AELWGVLEGLLLAKRLGFSTVELSIDS 3
           AEL+G+L GL +A   GF  + L  D+
Sbjct: 99  AELFGILNGLNIAWNAGFRNIILETDN 125

[34][TOP]
>UniRef100_Q2HRG4 Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HRG4_MEDTR
          Length = 1378

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 3/195 (1%)
 Frame = -3

Query: 581  TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNI--NCIAKISSEGRWCNFWA 408
            T +H LRDC      W Q+VP +++  FF  ++  W++  +  + +  I  E    +   
Sbjct: 1078 TTIHVLRDCRRACAIWVQMVPPQMQDEFFSISLHDWMHRFLRRSWLPNIR-EDYDADCLK 1136

Query: 407  LACSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQ 228
             + + F  W  K+  +N+     ++         T     S ++ + Q        +   
Sbjct: 1137 FSVTTFLLW--KDGGDNSIPEGDSL---------TDNGLYSIIKSLVQ--------EHTS 1177

Query: 227  PVGNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLL 51
            P   ++KLN DG C +  R AG  G+ R   G WLGGF   +G  +   AEL+ + +GL+
Sbjct: 1178 PTRRFIKLNVDGCCMDNPRSAGYGGLFRDVDGNWLGGFYGSLGFTTKMKAELYAICQGLI 1237

Query: 50   LAKRLGFSTVELSID 6
             A   G+  + +  D
Sbjct: 1238 TAWDFGYRNILVETD 1252

[35][TOP]
>UniRef100_B9RU26 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9RU26_RICCO
          Length = 153

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
 Frame = -3

Query: 350 VRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQWQQPVGNYVKLNTDGSCK-EGK 174
           V  S+ ++H    G  Y ++  +  +VG     LS ++ ++  G   KLN DGS + +  
Sbjct: 6   VSTSSSLFHFP--GTIYCSSSLSFPRVG-----LSLLELREIGG---KLNVDGSVRLQNG 55

Query: 173 RAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLAKRLGFSTVELSID 6
            A    +IR  +G WL GF   +G CS F A+LWGVL+GL LA   GF  V+L ID
Sbjct: 56  LASAGSLIRSAEGSWLSGFTHKLGSCSPFKAKLWGVLDGLRLAWDKGFKHVDLVID 111

[36][TOP]
>UniRef100_Q2HUN6 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            n=1 Tax=Medicago truncatula RepID=Q2HUN6_MEDTR
          Length = 1296

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 7/200 (3%)
 Frame = -3

Query: 581  TILHALRDCSLVNQFWQQVVPYEIRGVFFMSNIQVWVNNNINCIAKISSEGRWCNFWALA 402
            + LH +RDC      W ++  +     F +S++Q W+ N        SS  R   F A  
Sbjct: 1027 SFLHCVRDCKHSAAIWHKL-GFVTAAFFSVSSVQDWIRN-------FSSGSRAITFLA-- 1076

Query: 401  CSCFWTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSH-----IQ 237
               +W+WR++     N +  SN  + + ++     ++++A+     +  V+       ++
Sbjct: 1077 -GLWWSWRHR-----NLMCLSNETWPLTRISFRINDSINAIRSAFVKSNVIQPDSARMVK 1130

Query: 236  WQQPVGNYVKLNTDGSCKEGK-RAGCSGVIRGNQGEWLGGFAKGVGQCS-AFVAELWGVL 63
            W Q       LN DGSC     RAG  G+ R N G +L G++  + + +   +AEL  + 
Sbjct: 1131 WNQGNHQCHILNVDGSCLGTPIRAGFGGIFRNNVGGYLSGYSGFISESTDILLAELTALH 1190

Query: 62   EGLLLAKRLGFSTVELSIDS 3
            +GL++A  +G   +    DS
Sbjct: 1191 QGLIMAAEMGIEELACYSDS 1210

[37][TOP]
>UniRef100_B9SF16 Nucleic acid binding protein, putative n=1 Tax=Ricinus communis
           RepID=B9SF16_RICCO
          Length = 127

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 37/83 (44%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = -3

Query: 248 SHIQWQQPVGNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELW 72
           S I W+ P    +K+NTDG+ +     AG  G+ R +QG WL GFA  +G CSA  AELW
Sbjct: 6   SWIAWEPPPLGIIKVNTDGAFRASSSIAGGGGLCRNSQGHWLTGFAFKIGTCSALEAELW 65

Query: 71  GVLEGLLLAKRLGFSTVELSIDS 3
           G      LA   GF  V L +DS
Sbjct: 66  GA----NLAWAKGFKKVILEVDS 84

[38][TOP]
>UniRef100_B2BXJ9 Putative uncharacterized protein n=1 Tax=Arabidopsis lyrata subsp.
           lyrata RepID=B2BXJ9_ARALY
          Length = 172

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = -3

Query: 227 PVGNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLL 51
           P   + K+NTDG+ +     A  SGV+R + G+W GGFA  +G+CSA +AELWGV  GL 
Sbjct: 7   PEDGWSKMNTDGASQGNPGLATASGVLRNSDGKWCGGFALNIGRCSAPLAELWGVYYGLY 66

Query: 50  LAKRLGFSTVELSIDS 3
            A     + + L +DS
Sbjct: 67  TAWEHRVTRLVLEVDS 82

[39][TOP]
>UniRef100_B9S2H5 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9S2H5_RICCO
          Length = 279

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = -3

Query: 236 WQQPVGNYVKLNTDGS-CKEGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLE 60
           W  P    V LNTDG+      RA   GVIR  +  WL GF   +G+CS   A+LW  L 
Sbjct: 159 WSLPEEGIVNLNTDGAFVGMESRASAGGVIRDCRAGWLSGFGYNIGKCSPLDAKLWEALA 218

Query: 59  GLLLAKRLGFSTVELSIDS 3
           GL +A R G+  + L +DS
Sbjct: 219 GLDMASRQGYRKIILEMDS 237

[40][TOP]
>UniRef100_B9SX78 Nuclease, putative n=1 Tax=Ricinus communis RepID=B9SX78_RICCO
          Length = 113

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 25/56 (44%), Positives = 37/56 (66%)
 Frame = -3

Query: 170 AGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLAKRLGFSTVELSIDS 3
           AG  G+ R   G+W+GG+   +G C+A  AELW  L+GLL+A+R G+  + L +DS
Sbjct: 11  AGGGGLFRNEFGDWIGGYVVHIGYCTAIEAELWAALQGLLIARRRGYQRLVLEVDS 66

[41][TOP]
>UniRef100_B9SAL2 Nucleic acid binding protein, putative n=1 Tax=Ricinus communis
           RepID=B9SAL2_RICCO
          Length = 209

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 QRDKVLSHIQWQQPVGNYVKLNTDGSCKEGKRAGCS-GVIRGNQGEWLGGFAKGVGQCSA 90
           +R+++L  I W  P  ++ KLNT+GS ++ +    S GVI  + G WL GF   +  C  
Sbjct: 34  RREELL--IGWNPPTVSWFKLNTNGSVQKARGVATSRGVIHDDIGNWLRGFFMKMSFCIV 91

Query: 89  FVAELWGVLEGLLLAKRLGFSTVELSIDS 3
              ELWG+ +GL LA ++G   +++ +D+
Sbjct: 92  TATELWGLYQGLELAWKIGIRRIQVEVDN 120

[42][TOP]
>UniRef100_Q9LP00 F9C16.18 n=1 Tax=Arabidopsis thaliana RepID=Q9LP00_ARATH
          Length = 196

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
 Frame = -3

Query: 389 WTWRNKELHENNFVRPSNMIYHVNKLGETYRNAMSAMEKVGQRDKVLSHIQ----WQQPV 222
           W WR     +N F +          + E  +    A  K+      +  I     W  P 
Sbjct: 7   WKWRC----DNEFDKRGKCRDRTRLIKEAAKEVTLATNKMNGTSGSVGSIDILVGWSVPS 62

Query: 221 GNYVKLNTDGSCKEGKRAGCSG-VIRGNQGEWLGGFAKGVGQCSAFVAELWGVLE 60
             ++KLNTDG+ +       +G V+R  +GEWLGGF+  +G+ +A VAELWGV E
Sbjct: 63  EGWLKLNTDGASRGNPTLSTAGGVLRDREGEWLGGFSLNIGRRTAPVAELWGVSE 117

[43][TOP]
>UniRef100_B9SJS2 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9SJS2_RICCO
          Length = 299

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = -3

Query: 248 SHIQWQQPVGNYVKLNTDGSCKE-GKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELW 72
           S+ +W +P+   VKLNTD +C +  + A   G++    G WL GFA  +G CS   AELW
Sbjct: 231 SNTRWIKPLVGMVKLNTDWACVDLDRNATAEGLLHDANGSWLKGFAFRIGNCSPLDAELW 290

Query: 71  GVLEGL 54
           G L GL
Sbjct: 291 GALRGL 296

[44][TOP]
>UniRef100_B9SAK1 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9SAK1_RICCO
          Length = 147

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
 Frame = -3

Query: 242 IQWQQPVGNYVKLNTDGSCKEGKRAGCS---GVIRGNQGEWLGGFAKGVGQCSAFVAELW 72
           I W +P  N  KLNTDG+ K  + +GC+   GV+R + G+ + GF   +G CS  + ELW
Sbjct: 20  IGWSRPPLNGRKLNTDGAVK--RSSGCANSRGVLRTSDGKLVVGFMVNLGNCSVLMVELW 77

Query: 71  GVLEGLLLAKRLGFSTVELSIDS 3
            VL GL ++ +     +EL +D+
Sbjct: 78  SVLYGLRMSLQQDIRRIELEVDN 100

[45][TOP]
>UniRef100_Q9FXC8 F12A21.24 n=1 Tax=Arabidopsis thaliana RepID=Q9FXC8_ARATH
          Length = 803

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 32/73 (43%), Positives = 38/73 (52%)
 Frame = -3

Query: 221 GNYVKLNTDGSCKEGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLAK 42
           G+Y       S      A   GVIR   G W GGFA  +G+CSA +AELWGV  G  LA 
Sbjct: 641 GHYQTKKKSASRGNPGLATAGGVIRDGAGNWCGGFALNIGRCSAPLAELWGVYYGFYLAW 700

Query: 41  RLGFSTVELSIDS 3
               + VEL +DS
Sbjct: 701 TKALTRVELEVDS 713

[46][TOP]
>UniRef100_A2Q681 Ribonuclease H n=1 Tax=Medicago truncatula RepID=A2Q681_MEDTR
          Length = 170

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = -3

Query: 242 IQWQQPVGNYVKLNTDGSCKEGK-RAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGV 66
           I W  P    +K+N DGS      RAG  G+IR + G W+ GF++  G+ S  + EL+ +
Sbjct: 2   IAWHPPTAPGLKINVDGSSFGNPGRAGFGGLIRNDVGGWIHGFSESCGRVSNLLVELYAI 61

Query: 65  LEGLLLAKRLGFSTVELSID 6
           L GL LA  LGF  + L  D
Sbjct: 62  LNGLQLAWDLGFRIITLEPD 81

[47][TOP]
>UniRef100_B9RKW4 Nuclease, putative n=1 Tax=Ricinus communis RepID=B9RKW4_RICCO
          Length = 145

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
 Frame = -3

Query: 209 KLNTDGSCKE-GKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLAKRLG 33
           KLNTDG  K+ G +A   G+IR + G W+GGF   +G C    AELW  L+G+ LA   G
Sbjct: 5   KLNTDGISKDYGAKARGGGIIRDSNGCWVGGFVIHIGACDPVGAELWAFLQGISLAWSKG 64

Query: 32  FSTVELSIDS 3
              + + +DS
Sbjct: 65  IHNLIVEVDS 74

[48][TOP]
>UniRef100_B9HYN7 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
           RepID=B9HYN7_POPTR
          Length = 171

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = -3

Query: 242 IQWQQPVGNYVKLNTDGSCKEGK-RAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGV 66
           + W++P   + KLN DGSCK+   +A   GV R ++ E+L G+A+ +G+ ++ +AEL  +
Sbjct: 4   VAWEKPQIGWTKLNFDGSCKDSAGKASIGGVFRNHEAEFLLGYAESIGRTTSMIAELAAL 63

Query: 65  LEGLLLAKRLGFSTVELSIDS 3
             GL L    G+  V L  DS
Sbjct: 64  RRGLELVLENGWGNVWLEGDS 84

[49][TOP]
>UniRef100_Q9MAK5 F27F5.12 n=1 Tax=Arabidopsis thaliana RepID=Q9MAK5_ARATH
          Length = 205

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 37/97 (38%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
 Frame = -3

Query: 290 MSAMEKVGQRDKVLSHIQWQQPVGNYVKLNTDGSC-KEGKRAGCSGVIRGNQGEWLGGFA 114
           MS   KV QR    ++   +   G  VK   D S  K        G+IR   G W GGFA
Sbjct: 32  MSGKSKVYQRIGTRTNGNVETTAGRVVKARYDWSFHKNPVLTTAGGLIRDATGSWCGGFA 91

Query: 113 KGVGQCSAFVAELWGVLEGLLLAKRLGFSTVELSIDS 3
             +G CSA +AELWGV  GL L      + +E+ +DS
Sbjct: 92  LNIGVCSAPLAELWGVYYGLYLTWERHITRLEVEVDS 128

[50][TOP]
>UniRef100_B9S5J7 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9S5J7_RICCO
          Length = 149

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
 Frame = -3

Query: 242 IQWQQPVGNYVKLNTDGSCK--EGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWG 69
           + W  P+ N++K N DG  K   G  AG  GV R  +G  + GF   +G CSA  AELW 
Sbjct: 19  VGWDPPLENWIKFNIDGCSKGNPGSAAG-GGVFRDYRGRCVVGFMCNIGYCSAIGAELWA 77

Query: 68  VLEGLLLAKRLGFSTVELSIDS 3
              GL +A   G   + L++DS
Sbjct: 78  AFHGLTIAWNKGLRKLVLAMDS 99

[51][TOP]
>UniRef100_B9SYG9 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9SYG9_RICCO
          Length = 216

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 25/57 (43%), Positives = 35/57 (61%)
 Frame = -3

Query: 245 HIQWQQPVGNYVKLNTDGSCKEGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAEL 75
           +I W  P   ++KLN DG  K+GK AG +G+IR + G W+ GF + +G C    AEL
Sbjct: 161 NISWNPPPVGWIKLNVDGGVKDGK-AGATGLIRDSNGNWISGFVQFIGDCPVLEAEL 216

[52][TOP]
>UniRef100_B9SFD3 Nuclease, putative n=1 Tax=Ricinus communis RepID=B9SFD3_RICCO
          Length = 201

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
 Frame = -3

Query: 299 RNAMSAMEKVGQRDKVLSHIQWQQPVGNYVKLNTDGSCK--EGKRAGCSGVIRGNQGEWL 126
           +N +  + K   RD +   + W++P   + KLN DGSCK  EGK     GV R ++ E+L
Sbjct: 15  QNPVRILIKNWHRDPI--PVAWEKPQVGWTKLNFDGSCKGREGK-GSIGGVFRNHKAEFL 71

Query: 125 GGFAKGVGQCSAFVAELWGVLEGLLLAKRLGFSTVELSIDS 3
            G+A+ +G+ ++ +AEL  +  GL L    G+S V L  D+
Sbjct: 72  LGYAESIGRSTSTIAELAALRRGLELVLENGWSNVWLEGDA 112

[53][TOP]
>UniRef100_UPI00019854AD PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI00019854AD
          Length = 431

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 29/78 (37%), Positives = 42/78 (53%)
 Frame = -3

Query: 236 WQQPVGNYVKLNTDGSCKEGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEG 57
           W++P   + KLNTDGS   G  AG  G+ R + G+ +  +A    Q   F+ ELW +  G
Sbjct: 268 WEKPEFGWTKLNTDGSIDRG-NAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRG 326

Query: 56  LLLAKRLGFSTVELSIDS 3
           L+LA  LG   + +  DS
Sbjct: 327 LVLASGLGIKAIWVESDS 344

[54][TOP]
>UniRef100_A5BAI8 Putative uncharacterized protein n=1 Tax=Vitis vinifera
           RepID=A5BAI8_VITVI
          Length = 318

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 29/78 (37%), Positives = 42/78 (53%)
 Frame = -3

Query: 236 WQQPVGNYVKLNTDGSCKEGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEG 57
           W++P   + KLNTDGS   G  AG  G+ R + G+ +  +A    Q   F+ ELW +  G
Sbjct: 155 WEKPEFGWTKLNTDGSIDRG-NAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRG 213

Query: 56  LLLAKRLGFSTVELSIDS 3
           L+LA  LG   + +  DS
Sbjct: 214 LVLASGLGIKAIWVESDS 231

[55][TOP]
>UniRef100_B9SG24 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9SG24_RICCO
          Length = 132

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = -3

Query: 236 WQQPVGNYVKLNTDGSCKEGK-RAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLE 60
           W  P  ++ KLNTDG+  +        G+I+    +W+   +  +G CS   AELWG  +
Sbjct: 30  WNPPPPDFFKLNTDGAVHQSCWHEYVGGLIKDTNDKWVACLSMNIGLCSITFAELWGGYQ 89

Query: 59  GLLLAKRLGFSTVELSIDS 3
           GL+LA  LG + + + +DS
Sbjct: 90  GLMLADSLGITNLMVEVDS 108

[56][TOP]
>UniRef100_B9N0S8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N0S8_POPTR
          Length = 244

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 37/83 (44%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
 Frame = -3

Query: 248 SHIQWQQPVGNYVKLNTDGSCKE-GKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELW 72
           S I+W +P   +VKLNTD S K    ++  +GV R   G WL GF+  V   SAF AEL 
Sbjct: 47  SGIRWNKPPPGFVKLNTDASYKYISSKSSIAGVCRDEHGIWLFGFSCRVKSESAFEAELL 106

Query: 71  GVLEGLLLAKRLGFSTVELSIDS 3
            V E L LA   G   V L  DS
Sbjct: 107 AVREALKLAWDKGLKKVILESDS 129

[57][TOP]
>UniRef100_A4PSD6 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            n=1 Tax=Medicago truncatula RepID=A4PSD6_MEDTR
          Length = 869

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 12/205 (5%)
 Frame = -3

Query: 581  TILHALRDCSLVNQFWQQV---VPYEIRGVFFMSNIQVWVNNN-INCIAKISSEGRWCNF 414
            ++ H +RDC      W  +    PY     F +++I++W  +  I   A + + G W   
Sbjct: 601  SVFHCIRDCPFSKIIWHHIGFSEPY----FFAVTDIEIWCKSGLIGSKAILFAAGLW--- 653

Query: 413  WALACSCFWTWRNKE---LHENNFVRP---SNMIYHVNKLGETYRNAMSAMEKVGQRDKV 252
                    W WR++    + E + +     +N+ Y V+ +   +   +  M  V  R   
Sbjct: 654  --------WIWRSRNARCMSEESMLLQRLAANITYFVDDINSCFFQPLPVM--VSDR--- 700

Query: 251  LSHIQWQQPVGNYVKLNTDGSCKEGK-RAGCSGVIRGNQGEWLGGFAKGVGQCS-AFVAE 78
              +++W     N   LN DGSC     RAG  G+IR + G +L GF   +   S   +AE
Sbjct: 701  --YVKWNNSNFNCTILNVDGSCIGSPIRAGFGGLIRNSVGFYLSGFLGFLPSSSDILLAE 758

Query: 77   LWGVLEGLLLAKRLGFSTVELSIDS 3
            L  + +G+  A  +G + + +  DS
Sbjct: 759  LTAIYDGINTAIDMGITDMAVYSDS 783

[58][TOP]
>UniRef100_B9SC59 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9SC59_RICCO
          Length = 159

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = -3

Query: 242 IQWQQPVGNYVKLNTDGSCKE-GKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGV 66
           +Q   P    VK+N DGS K     A   G+IR  +G WL GF   +G CS   AE WGV
Sbjct: 22  VQGLPPSLGRVKVNIDGSVKLINGLASAGGLIRNTEGSWLFGFTHKLGSCSPLGAEFWGV 81

Query: 65  LEGLLLA 45
           L+GL LA
Sbjct: 82  LDGLRLA 88

[59][TOP]
>UniRef100_B9REA7 Nucleic acid binding protein, putative n=1 Tax=Ricinus communis
           RepID=B9REA7_RICCO
          Length = 244

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = -3

Query: 242 IQWQQPVGNYVKLNTDGSCK-EGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFV-AELWG 69
           I W+ P    +KLNTDG+ + E   A   G+IR ++G W+ GF   +G  S  V AEL G
Sbjct: 75  ISWEPPTTGCMKLNTDGAKRGEDGPAAAGGLIRDSRGRWIRGFKCYMGLGSTSVKAELLG 134

Query: 68  VLEGLLLAKRLGFSTVELSIDS 3
           ++EGL LA+++G   + +  D+
Sbjct: 135 LIEGLKLARKIGCEKLIVETDN 156

[60][TOP]
>UniRef100_B9H202 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H202_POPTR
          Length = 202

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = -3

Query: 242 IQWQQPVGNYVKLNTDGSCK-EGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGV 66
           + W++P   + KLN DGSCK    +A   GV R ++ E+L G+A+ +G  ++ +AEL  +
Sbjct: 33  VSWKKPQIGWTKLNFDGSCKGTAGKASIGGVFRNHEAEFLLGYAEPIGGTTSTIAELAAL 92

Query: 65  LEGLLLAKRLGFSTVELSIDS 3
             GL L    G+S V L  DS
Sbjct: 93  RRGLELVLENGWSNVWLEGDS 113

[61][TOP]
>UniRef100_B9MXX8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9MXX8_POPTR
          Length = 248

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 35/81 (43%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = -3

Query: 242 IQWQQPVGNYVKLNTDGSCKEG-KRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGV 66
           I W++P   +VKLNTD S K    ++  +GV R   G WL GF+  V   SAF AEL  V
Sbjct: 53  IHWKKPPLGFVKLNTDASYKYNCSKSSVAGVCRDEHGIWLFGFSSRVKSGSAFEAELLAV 112

Query: 65  LEGLLLAKRLGFSTVELSIDS 3
            E L LA   G   V +  DS
Sbjct: 113 REALKLAWDKGLKRVIVESDS 133

[62][TOP]
>UniRef100_Q9ZVG3 T2P11.14 protein n=3 Tax=Arabidopsis thaliana RepID=Q9ZVG3_ARATH
          Length = 158

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 24/52 (46%), Positives = 35/52 (67%)
 Frame = -3

Query: 158 GVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLAKRLGFSTVELSIDS 3
           G +R   G+W G FA  +G+C+A +AELWGV  GL++A   G + +EL +DS
Sbjct: 17  GALRDEYGDWRGSFALNLGRCTAPLAELWGVYYGLVIAWEKGITRLELEVDS 68

[63][TOP]
>UniRef100_B9SMZ5 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9SMZ5_RICCO
          Length = 437

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 28/78 (35%), Positives = 43/78 (55%)
 Frame = -3

Query: 236 WQQPVGNYVKLNTDGSCKEGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEG 57
           W++P   ++KLNTDGS  + + AG  G++R N+G  +  F         F+ ELW +  G
Sbjct: 274 WKKPDVGWIKLNTDGSV-DRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWRG 332

Query: 56  LLLAKRLGFSTVELSIDS 3
           L+LA  LG   + +  DS
Sbjct: 333 LVLALGLGIKVIWVESDS 350

[64][TOP]
>UniRef100_UPI00019860A8 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI00019860A8
          Length = 205

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
 Frame = -3

Query: 242 IQWQQPVGNYVKLNTDGSCK-EGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGV 66
           + W++P   + KLN DGSCK    RA   GVIR +   +L G+A+ +G  ++ +AE+  +
Sbjct: 36  VAWEKPQIGWTKLNFDGSCKCSSGRASIGGVIRDHNAAFLLGYAESIGHANSTIAEMAAL 95

Query: 65  LEGLLLAKRLGFSTVELSID 6
             GL L    G+S V L  D
Sbjct: 96  RRGLELVVENGWSQVWLEGD 115

[65][TOP]
>UniRef100_A7R2T4 Chromosome undetermined scaffold_448, whole genome shotgun sequence
           n=1 Tax=Vitis vinifera RepID=A7R2T4_VITVI
          Length = 2141

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
 Frame = -3

Query: 242 IQWQQPVGNYVKLNTDGSCK-EGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGV 66
           + W++P   + KLN DGSCK    RA   GVIR +   +L G+A+ +G  ++ +AE+  +
Sbjct: 36  VAWEKPQIGWTKLNFDGSCKCSSGRASIGGVIRDHNAAFLLGYAESIGHANSTIAEMAAL 95

Query: 65  LEGLLLAKRLGFSTVELSID 6
             GL L    G+S V L  D
Sbjct: 96  RRGLELVVENGWSQVWLEGD 115

[66][TOP]
>UniRef100_A2Q5B0 Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago
           truncatula RepID=A2Q5B0_MEDTR
          Length = 113

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 25/64 (39%), Positives = 37/64 (57%)
 Frame = -3

Query: 197 DGSCKEGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLEGLLLAKRLGFSTVE 18
           DG+   G +AGC  + +     W  GF K  G+C+ +VAELWG  EGL +A   G+  VE
Sbjct: 44  DGASSGGVQAGCGSLFQDEHEIWSCGFFKYFGRCNTYVAELWGAYEGLEIALDRGYFRVE 103

Query: 17  LSID 6
            +++
Sbjct: 104 YNVN 107

[67][TOP]
>UniRef100_Q6K204 Putative uncharacterized protein B1469H02.35 n=1 Tax=Oryza sativa
           Japonica Group RepID=Q6K204_ORYSJ
          Length = 212

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = -3

Query: 299 RNAMSAMEKVGQRDKVLSHIQWQQPVGNYVKLNTDGSCKEG-KRAGCSGVIRGNQGEWLG 123
           R+     E+  + D   S   W++P   ++KLN DGS K   K A   GV R ++G ++ 
Sbjct: 30  RHPWKGEERGREADSSSSARTWRKPEAGWIKLNFDGSSKHATKIASIGGVYRDHEGAFVL 89

Query: 122 GFAKGVGQCSAFVAELWGVLEGLLLAKRLGFSTVELSIDS 3
           G+A+ +G+ ++ VAEL  +  GL L  R G+  V    DS
Sbjct: 90  GYAERIGRATSSVAELAALRRGLELVVRNGWRRVWAEGDS 129

[68][TOP]
>UniRef100_B9H6T1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H6T1_POPTR
          Length = 329

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 28/79 (35%), Positives = 42/79 (53%)
 Frame = -3

Query: 239 QWQQPVGNYVKLNTDGSCKEGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLE 60
           QW++P   ++KLNTDGS  + + AG  G+ R  +G  + GF         F+ ELW +  
Sbjct: 166 QWKRPDFGWIKLNTDGSI-DSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIWR 224

Query: 59  GLLLAKRLGFSTVELSIDS 3
           GL+LA  L    + +  DS
Sbjct: 225 GLVLALNLHIQVLWVESDS 243

[69][TOP]
>UniRef100_B9SX47 Nuclease, putative n=1 Tax=Ricinus communis RepID=B9SX47_RICCO
          Length = 177

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
 Frame = -3

Query: 227 PVGNYVKLNTDGSCKEGKR-AGCSGVIRGNQGEWLGGFAKGVGQC-SAFVAELWGVLEGL 54
           P   + K+NTDG+ K+    A  +G+ R + G+W G FA  +  C SAFVAEL  +L GL
Sbjct: 7   PPEGWFKINTDGTWKKSFGIATAAGLFRNSDGQWCGAFAIKLTDCYSAFVAELCSILNGL 66

Query: 53  LLAKRLGFSTVELSIDS 3
            +A   GF  + L  D+
Sbjct: 67  KIAWDAGFKNIILETDN 83

[70][TOP]
>UniRef100_B9RU98 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9RU98_RICCO
          Length = 136

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 25/70 (35%), Positives = 41/70 (58%)
 Frame = -3

Query: 239 QWQQPVGNYVKLNTDGSCKEGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGVLE 60
           +W+ P    +KLN+D   +    A  S ++  ++G W+ GF++ +G C  F A++WG+  
Sbjct: 68  RWECPNFGSIKLNSDKGLRNNI-ATASALLHDDKGNWIVGFSQKIGSCLVFEAKMWGLFT 126

Query: 59  GLLLAKRLGF 30
           GL LA  LGF
Sbjct: 127 GLQLAWSLGF 136

[71][TOP]
>UniRef100_B9GW77 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GW77_POPTR
          Length = 161

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = -3

Query: 242 IQWQQPVGNYVKLNTDG-SCKEGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGV 66
           ++W  P   Y KLN DG S    + A C GVIRG+ G W   F+   G  +   AELWG+
Sbjct: 91  VKWLPPALGYWKLNVDGDSLGNPEGADCGGVIRGSLGNWKAEFSVYFGHTANPAAELWGI 150

Query: 65  LEGLLLA 45
            +G+ LA
Sbjct: 151 WQGIRLA 157

[72][TOP]
>UniRef100_B9F175 Putative uncharacterized protein n=2 Tax=Oryza sativa
           RepID=B9F175_ORYSJ
          Length = 204

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 QRDKVLSHIQWQQPVGNYVKLNTDGSCKEG-KRAGCSGVIRGNQGEWLGGFAKGVGQCSA 90
           Q D   S   W++P   ++KLN DGS K   K A   GV R ++G ++ G+A+ +G+ ++
Sbjct: 33  QADSSSSARTWRKPEAGWIKLNFDGSSKHATKIASIGGVYRDHEGAFVLGYAERIGRATS 92

Query: 89  FVAELWGVLEGLLLAKRLGFSTVELSIDS 3
            VAEL  +  GL L  R G+  V    DS
Sbjct: 93  SVAELAALRRGLELVVRNGWRRVWAEGDS 121

[73][TOP]
>UniRef100_A5B4E3 Putative uncharacterized protein n=1 Tax=Vitis vinifera
           RepID=A5B4E3_VITVI
          Length = 697

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = -3

Query: 242 IQWQQPVGNYVKLNTDGSCK-EGKRAGCSGVIRGNQGEWLGGFAKGVGQCSAFVAELWGV 66
           + W++P   + KLN DGSCK    RA   GVIR +   +L G+A+ +G   + +AE+  +
Sbjct: 471 VAWEKPQIGWTKLNFDGSCKCSSGRASIGGVIRDHNAAFLLGYAESIGHAXSTIAEMAAL 530

Query: 65  LEGLLLAKRLGFSTVELSID 6
             GL L    G+S V L  D
Sbjct: 531 RRGLELVVENGWSQVWLEGD 550