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[1][TOP]
>UniRef100_B8R492 DNA-directed RNA polymerase n=1 Tax=Trifolium subterraneum
RepID=B8R492_TRISU
Length = 1349
Score = 383 bits (984), Expect = e-105
Identities = 185/194 (95%), Positives = 187/194 (96%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F+CNIELYVTIESHDIIHNV VPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK
Sbjct: 379 FICNIELYVTIESHDIIHNVTVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI
Sbjct: 439 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
H+DSLSNGKRNTS LFVSDDHVKH FFSFKTFATKE GISNYSIFNQTICTD SHFM PA
Sbjct: 499 HIDSLSNGKRNTSTLFVSDDHVKHKFFSFKTFATKEKGISNYSIFNQTICTDRSHFMDPA 558
Query: 541 IFHDTFNFLAKRRR 582
IFHDTFN LAKRRR
Sbjct: 559 IFHDTFNLLAKRRR 572
[2][TOP]
>UniRef100_UPI00017E10C5 RNA polymerase beta'''' subunit n=1 Tax=Medicago truncatula
RepID=UPI00017E10C5
Length = 1374
Score = 343 bits (879), Expect = 7e-93
Identities = 166/194 (85%), Positives = 175/194 (90%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F+CNI+LYVT+ES DIIHNVI+PPKSFLLVQNDQYVKSEQVIAEIRAGT TFNLKERV+K
Sbjct: 383 FICNIDLYVTVESDDIIHNVIIPPKSFLLVQNDQYVKSEQVIAEIRAGTSTFNLKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHASEF+YSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI
Sbjct: 443 HIYSDSEGEMHWSTDVYHASEFLYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++DSLS GKRN S L VS+D VK S KTF TKE GISNYSI NQ ICTDHSH MYPA
Sbjct: 503 NIDSLSTGKRNISNLLVSNDEVKLKLLSLKTFGTKEKGISNYSILNQMICTDHSHLMYPA 562
Query: 541 IFHDTFNFLAKRRR 582
IFHDTF LAKRRR
Sbjct: 563 IFHDTFYLLAKRRR 576
[3][TOP]
>UniRef100_P12227 DNA-directed RNA polymerase subunit beta'' (Fragment) n=1 Tax=Pisum
sativum RepID=RPOC2_PEA
Length = 1163
Score = 337 bits (863), Expect = 5e-91
Identities = 165/194 (85%), Positives = 174/194 (89%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F+CNI+LYVTIES DIIHNVI+PPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERV+K
Sbjct: 175 FICNIDLYVTIESDDIIHNVIIPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVRK 234
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRS+TIHFLLRKDQDQI
Sbjct: 235 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSNTIHFLLRKDQDQI 294
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+DSLSNGK N S L +D VKH F F TF TKE GIS+YSIFN+ ICTDHS YPA
Sbjct: 295 TMDSLSNGKTNISNLLERNDQVKHKLFRFNTFGTKEKGISDYSIFNEIICTDHS---YPA 351
Query: 541 IFHDTFNFLAKRRR 582
IFHDTF FLAKRRR
Sbjct: 352 IFHDTFYFLAKRRR 365
[4][TOP]
>UniRef100_Q8HVY3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Glycine max
RepID=RPOC2_SOYBN
Length = 1386
Score = 281 bits (720), Expect = 2e-74
Identities = 138/194 (71%), Positives = 156/194 (80%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQN+QYVKSEQVIAEIRAGTYTFNLKE+V+K
Sbjct: 379 FLCYIDLYVTIESGDIIHNVTIPPKSFLLVQNNQYVKSEQVIAEIRAGTYTFNLKEKVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
H+YSD EGEMHWSTDVYHASEF YSNVHILPKTSHLWILSGKS RS ++ F +RKDQDQ+
Sbjct: 439 HVYSDLEGEMHWSTDVYHASEFRYSNVHILPKTSHLWILSGKSYRSGSVSFSIRKDQDQM 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS G+R+ L S V+H F F KE IS+YSIFNQ I DH HF +P
Sbjct: 499 NIHYLSTGERDFCNLLASKKKVRHKLFRFNPSDKKERRISDYSIFNQIISIDHCHFTHPT 558
Query: 541 IFHDTFNFLAKRRR 582
IFHDT + LAKRRR
Sbjct: 559 IFHDTTDLLAKRRR 572
[5][TOP]
>UniRef100_A4GGA7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Phaseolus
vulgaris RepID=RPOC2_PHAVU
Length = 1366
Score = 276 bits (706), Expect = 8e-73
Identities = 133/194 (68%), Positives = 156/194 (80%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYV+IE+ DIIHNV +PPKSFLLVQN+QYVKSEQVIAEI AGTYTFN KE+V+K
Sbjct: 379 FLCYIDLYVSIENGDIIHNVTIPPKSFLLVQNNQYVKSEQVIAEILAGTYTFNFKEKVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
H+YSD EGEMHWST+VYHASEF YSNVHILPKTSHLWILSGKS RS ++ F RKDQDQ+
Sbjct: 439 HVYSDLEGEMHWSTNVYHASEFKYSNVHILPKTSHLWILSGKSDRSGSVSFSTRKDQDQL 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS G+R+ S++ ++H F F KE IS+YSI NQ IC DH HF +PA
Sbjct: 499 NIHSLSTGERDICNHLASNNKIRHKLFHFNPSEKKERRISDYSIINQIICIDHCHFTHPA 558
Query: 541 IFHDTFNFLAKRRR 582
IFHDT + LAKRRR
Sbjct: 559 IFHDTTDLLAKRRR 572
[6][TOP]
>UniRef100_A9XWC0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Suriana maritima
RepID=A9XWC0_9FABA
Length = 1274
Score = 275 bits (704), Expect = 1e-72
Identities = 134/194 (69%), Positives = 156/194 (80%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYT N KERV+K
Sbjct: 350 FLCYIDLYVTIESEDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTLNFKERVRK 409
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GEMHWSTDVYHA EF YSNVHILPKTSHLWILSG+SCRS + F L KDQDQ+
Sbjct: 410 HIYSDSKGEMHWSTDVYHAPEFTYSNVHILPKTSHLWILSGESCRSGAVPFSLHKDQDQM 469
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+++SLS G R S L V++D ++H FFS KE+GI +YS N+ IC H +F+YP
Sbjct: 470 NINSLSAGGRYISNLSVNNDPLRHEFFSSNLSGKKESGIPDYSGLNRIICLGHCNFIYPD 529
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 530 ILHENSDLLAKRRR 543
[7][TOP]
>UniRef100_A9XWB9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stylobasium
spathulatum RepID=A9XWB9_9FABA
Length = 1266
Score = 275 bits (704), Expect = 1e-72
Identities = 135/194 (69%), Positives = 155/194 (79%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L+V IES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYTFN KERV+K
Sbjct: 349 FLCYIDLHVIIESEDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTFNFKERVRK 408
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVHILPKTSHLWILSG+SCRS + F L +DQDQ+
Sbjct: 409 HIYSDSEGEMHWSTDVYHAPEFTYSNVHILPKTSHLWILSGESCRSGAVPFSLHRDQDQM 468
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+++SLS G R S L VS+D V+ FFS KE+GI +YS N+ IC H HF+YP
Sbjct: 469 NINSLSAGGRYISNLSVSNDQVRPKFFSSNLSGKKESGILDYSGLNRIICLGHCHFIYPD 528
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 529 ILHENSDLLAKRRR 542
[8][TOP]
>UniRef100_A9XW87 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixerba brexioides
RepID=A9XW87_IXEBR
Length = 1283
Score = 275 bits (704), Expect = 1e-72
Identities = 134/194 (69%), Positives = 152/194 (78%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAG+YTFN KERV+K
Sbjct: 350 FLCYIDLYVTIESEDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGSYTFNFKERVRK 409
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG CRS + F KDQDQ+
Sbjct: 410 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGLCRSSVVPFSPHKDQDQM 469
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S+S +R S L V +D V+H FFS KE I +YS N+ ICT H HF+YPA
Sbjct: 470 SIHSISVERRYISSLSVDNDQVRHKFFSSYLSGKKEVRIPDYSELNRIICTGHCHFIYPA 529
Query: 541 IFHDTFNFLAKRRR 582
I H+ F+ LAKRRR
Sbjct: 530 ILHENFDLLAKRRR 543
[9][TOP]
>UniRef100_A9XW73 DNA-directed RNA polymerase (Fragment) n=1 Tax=Eucryphia lucida
RepID=A9XW73_EUCLU
Length = 1280
Score = 273 bits (699), Expect = 6e-72
Identities = 133/193 (68%), Positives = 154/193 (79%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYTFN KERV+K
Sbjct: 352 FLCYIDLYVTIESEDILHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTFNFKERVRK 411
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWIL+G SCRS + F L KDQDQ+
Sbjct: 412 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILAGGSCRSSVVPFSLHKDQDQM 471
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R S L V++D V+H FFS KE+ I +YS FN ICT H + +YPA
Sbjct: 472 NVHSLSVERRYISSLSVNNDQVRHKFFSSDLSGKKESRIPHYSEFNLIICTGHCNLIYPA 531
Query: 541 IFHDTFNFLAKRR 579
I H+ + LAKRR
Sbjct: 532 ILHENSDLLAKRR 544
[10][TOP]
>UniRef100_A9XWB8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Strasburgeria
robusta RepID=A9XWB8_9ROSI
Length = 1281
Score = 272 bits (696), Expect = 1e-71
Identities = 133/194 (68%), Positives = 151/194 (77%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAG+YTFN KERV+K
Sbjct: 349 FLCYIDLYVTIESEDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGSYTFNFKERVRK 408
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG CRS + F KDQDQ+
Sbjct: 409 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGLCRSSVVPFSPHKDQDQM 468
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S+S + S L V +D V+H FFS KE I +YS N+ ICT H HF+YPA
Sbjct: 469 SIHSISVERGYISSLSVDNDQVRHKFFSSYLSGKKEVRIPDYSELNRIICTAHCHFIYPA 528
Query: 541 IFHDTFNFLAKRRR 582
I H+ F+ LAKRRR
Sbjct: 529 ILHENFDLLAKRRR 542
[11][TOP]
>UniRef100_A9XW42 DNA-directed RNA polymerase (Fragment) n=1 Tax=Albizia julibrissin
RepID=A9XW42_ALBJU
Length = 1321
Score = 272 bits (695), Expect = 2e-71
Identities = 135/196 (68%), Positives = 156/196 (79%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES +I+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYTFN KERV+K
Sbjct: 349 FLCYIDLYVTIESENILHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTFNFKERVRK 408
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVHILPKTSHLWILSG+SCRS I F L KDQDQ+
Sbjct: 409 HIYSDSEGEMHWSTDVYHAPEFTYSNVHILPKTSHLWILSGRSCRSGAISFSLHKDQDQM 468
Query: 361 HLDSLSNGKRNTSPLFVSDD--HVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMY 534
++ SLS G R S L VS+D V+H FFS K++GI +YS N+ +C H + +Y
Sbjct: 469 NIHSLSAGGRYISNLVVSNDQVQVRHKFFSSNPSDKKKSGIPDYSGLNRILCMGHFNLIY 528
Query: 535 PAIFHDTFNFLAKRRR 582
PAI H+ + LAKRRR
Sbjct: 529 PAILHENSDLLAKRRR 544
[12][TOP]
>UniRef100_A9XWB7 DNA-directed RNA polymerase n=1 Tax=Staphylea colchica
RepID=A9XWB7_9ROSI
Length = 1390
Score = 270 bits (690), Expect = 6e-71
Identities = 129/194 (66%), Positives = 152/194 (78%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV++EQVIAEIR GTYTFN KERV+K
Sbjct: 383 FLCYIDLYVTIESEDIIHNVTIPPKSFLLVQNDQYVEAEQVIAEIRGGTYTFNFKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCR + F L KDQDQ+
Sbjct: 443 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRFSVVPFALHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+L S+S +R +S L ++D V+H F + + K+ IS YS N+ IC H +F+YPA
Sbjct: 503 YLHSVSVERRESSSLSANNDQVRHKFLNSDPYGKKKVRISGYSELNRIICIGHCNFIYPA 562
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 563 ILHENSDLLAKRRR 576
[13][TOP]
>UniRef100_A9XW64 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coriaria nepalensis
RepID=A9XW64_9ROSI
Length = 1283
Score = 269 bits (688), Expect = 1e-70
Identities = 134/194 (69%), Positives = 152/194 (78%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGT TFN KERV+K
Sbjct: 354 FLCYIDLYVTIESEDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVRK 413
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SC S + F L KDQDQI
Sbjct: 414 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCISSIVPFSLYKDQDQI 473
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS R S L V++D V+H FFS + KE+GI +YS N+ ICT H + +YP+
Sbjct: 474 NVHSLSVEGRYISSLSVNNDQVRHKFFSSDSSGKKESGIPDYSELNRIICTGHCNLIYPS 533
Query: 541 IFHDTFNFLAKRRR 582
IFH AKRRR
Sbjct: 534 IFHGNSYLFAKRRR 547
[14][TOP]
>UniRef100_A9XWB0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Quillaja saponaria
RepID=A9XWB0_9FABA
Length = 1313
Score = 268 bits (686), Expect = 2e-70
Identities = 132/194 (68%), Positives = 153/194 (78%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYTFN KE+V+K
Sbjct: 347 FLCYIDLYVTIESEDILHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTFNFKEKVRK 406
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVHILPKTSHLWILSG S + F L KDQDQ+
Sbjct: 407 HIYSDSEGEMHWSTDVYHAPEFTYSNVHILPKTSHLWILSGGPGGSGAVPFSLHKDQDQM 466
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS G R+ S L V++D V+H FFS KE IS+YS N+ +C HS+F+Y A
Sbjct: 467 NIHSLSAGGRSISNLSVNNDQVRHKFFSSNLSGKKEKRISDYSGLNRILCAGHSNFLYSA 526
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 527 ILHENSDLLAKRRR 540
[15][TOP]
>UniRef100_A9XWB6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stachyurus praecox
RepID=A9XWB6_9ROSI
Length = 1280
Score = 268 bits (685), Expect = 2e-70
Identities = 129/194 (66%), Positives = 152/194 (78%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV++EQVIAEIR GTYT N KERV+K
Sbjct: 352 FLCYIDLYVTIESEDIIHNVTIPPKSFLLVQNDQYVEAEQVIAEIRGGTYTLNFKERVRK 411
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS + F L KDQDQ+
Sbjct: 412 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSSVVPFALHKDQDQM 471
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+L S+S +R S L V++D V+H F + + K+ IS YS ++ IC H +F+YPA
Sbjct: 472 YLHSISVERRYGSSLSVNNDQVRHKFLNSDLYGKKKVRISGYSELSRIICIGHCNFIYPA 531
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 532 ILHENSDLLAKRRR 545
[16][TOP]
>UniRef100_A9XW71 DNA-directed RNA polymerase (Fragment) n=1 Tax=Elaeocarpus
angustifolius RepID=A9XW71_9ROSI
Length = 1263
Score = 268 bits (685), Expect = 2e-70
Identities = 128/194 (65%), Positives = 154/194 (79%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES +I+HNV +PPKSFLLVQNDQY++SEQVIAEIRAGTYTFN KER+QK
Sbjct: 352 FLCYIDLYVTIESENILHNVTIPPKSFLLVQNDQYIESEQVIAEIRAGTYTFNFKERIQK 411
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGE+HWSTDVYHA EF YSNVH+LPKTSHLWIL+G +CRS + F L KDQDQ+
Sbjct: 412 HIYSDSEGEIHWSTDVYHAPEFTYSNVHLLPKTSHLWILAGGACRSSAVPFSLHKDQDQM 471
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ SLS +R S L V++D V+H FFS KE+ I +YS ++ ICT H + +YPA
Sbjct: 472 NFHSLSVERRYISSLSVNNDQVRHKFFSSDLSGKKESRIPHYSELSRIICTGHCNLIYPA 531
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 532 ILHENSDLLAKRRR 545
[17][TOP]
>UniRef100_A9XW66 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crossosoma
californicum RepID=A9XW66_CROCA
Length = 1266
Score = 266 bits (679), Expect = 1e-69
Identities = 127/194 (65%), Positives = 152/194 (78%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DII+NV +PPKSFLLVQNDQYV++EQVIAEIR GTYTFN KERV+K
Sbjct: 334 FLCYIDLYVTIESEDIIYNVTIPPKSFLLVQNDQYVEAEQVIAEIRGGTYTFNFKERVRK 393
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS + F L KDQDQ
Sbjct: 394 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSSVVPFALHKDQDQT 453
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S+S +R +S L V++D V+H + + K+ IS+YS N+ +C H +F+YPA
Sbjct: 454 YRQSISVDRRYSSSLSVNNDQVRHKSLNSDLYGKKKVRISDYSELNRIVCIGHCNFIYPA 513
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 514 ILHENSDLLAKRRR 527
[18][TOP]
>UniRef100_A9XW95 DNA-directed RNA polymerase (Fragment) n=1 Tax=Manihot esculenta
RepID=A9XW95_MANES
Length = 1281
Score = 265 bits (677), Expect = 2e-69
Identities = 130/194 (67%), Positives = 151/194 (77%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAG YT N KE+V+K
Sbjct: 353 FLCYIDLYVTIESQDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGAYTLNFKEKVRK 412
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS + F L KDQDQ+
Sbjct: 413 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGSSCRSSIVPFSLHKDQDQM 472
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R S V++D VKH FFS KE+GI +YS N++ICT H + +Y
Sbjct: 473 NVHSLSVKRRYISSPSVNNDQVKHKFFSSDFSGKKESGIPDYSELNRSICTGHCNLIYST 532
Query: 541 IFHDTFNFLAKRRR 582
I + + LAKRRR
Sbjct: 533 ILYKNSDLLAKRRR 546
[19][TOP]
>UniRef100_A9XW89 DNA-directed RNA polymerase (Fragment) n=1 Tax=Juglans nigra
RepID=A9XW89_JUGNI
Length = 1268
Score = 265 bits (677), Expect = 2e-69
Identities = 132/195 (67%), Positives = 156/195 (80%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYTFN KERV+K
Sbjct: 348 FLCYIDLYVTIESEDIIHNVTIPPKSFLLVQNDQYVQSEQVIAEIRAGTYTFNFKERVRK 407
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG S RS + F L+KDQD+I
Sbjct: 408 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSRRSSVVPFSLQKDQDKI 467
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTF-ATKETGISNYSIFNQTICTDHSHFMYP 537
+++SLS KR+ S L +D V+ FFS F KE+GI +YS N+ ICT H + +YP
Sbjct: 468 NVNSLSVEKRSISSLSGDNDQVRQKFFSSDLFEKKKESGIPDYSKLNRIICTGHFNLIYP 527
Query: 538 AIFHDTFNFLAKRRR 582
AI + ++ LAKR++
Sbjct: 528 AILYKNYDLLAKRQK 542
[20][TOP]
>UniRef100_C0LE64 DNA-directed RNA polymerase n=1 Tax=Jatropha curcas
RepID=C0LE64_9ROSI
Length = 1394
Score = 264 bits (674), Expect = 4e-69
Identities = 129/194 (66%), Positives = 152/194 (78%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYT N KE+V+K
Sbjct: 383 FLCYIDLYVTIESQDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTLNFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWS+DVYHA EF YSNVH+LPKTSHLWILSG SCRS + F L KDQDQ+
Sbjct: 443 HIYSDSEGEMHWSSDVYHAPEFTYSNVHLLPKTSHLWILSGSSCRSSIVPFSLHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ S+S +R S L V++D VKH F S KE+ I +YS N+ ICT H + +Y A
Sbjct: 503 NVHSISVKRRYISSLSVNNDQVKHKFISSDFSGKKESKIPDYSELNRIICTGHCNLIYSA 562
Query: 541 IFHDTFNFLAKRRR 582
I ++ + LAKRRR
Sbjct: 563 ILYENSDLLAKRRR 576
[21][TOP]
>UniRef100_A9XW92 DNA-directed RNA polymerase (Fragment) n=1 Tax=Leonia glycycarpa
RepID=A9XW92_9ROSI
Length = 1274
Score = 263 bits (673), Expect = 6e-69
Identities = 130/194 (67%), Positives = 148/194 (76%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DII NV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYT N ERV+K
Sbjct: 350 FLCYIDLYVTIESQDIIQNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTLNFTERVRK 409
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS I L KDQDQ+
Sbjct: 410 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSSIIPLSLHKDQDQM 469
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS K S + +D VKH FF+ KE GI +YS N+ +CT H + +YPA
Sbjct: 470 NIHSLSVEKSYISSPSIKNDQVKHKFFNLDLSGKKERGIPDYSELNRILCTGHCNLIYPA 529
Query: 541 IFHDTFNFLAKRRR 582
I H F+ LAK+RR
Sbjct: 530 IPHKNFDLLAKKRR 543
[22][TOP]
>UniRef100_B1NWE0 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Manihot
esculenta RepID=RPOC2_MANES
Length = 1393
Score = 263 bits (673), Expect = 6e-69
Identities = 129/194 (66%), Positives = 151/194 (77%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTI+S DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAG YT N KE+V+K
Sbjct: 383 FLCYIDLYVTIKSQDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGAYTLNFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS + F L KDQDQ+
Sbjct: 443 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGSSCRSSIVPFSLHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R S V++D VKH FFS KE+GI +YS N++ICT H + +Y
Sbjct: 503 NVHSLSVKRRYISSPSVNNDQVKHKFFSSDFSGKKESGIPDYSELNRSICTGHCNLIYST 562
Query: 541 IFHDTFNFLAKRRR 582
I + + LAKRRR
Sbjct: 563 ILYKNSDLLAKRRR 576
[23][TOP]
>UniRef100_A9XWA0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nitraria retusa
RepID=A9XWA0_9ROSI
Length = 1272
Score = 262 bits (670), Expect = 1e-68
Identities = 130/196 (66%), Positives = 155/196 (79%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+++LYV IES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYT N KE+V+K
Sbjct: 338 FLCSMDLYVIIESEDIMHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTLNFKEKVRK 397
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS + F L KDQDQ+
Sbjct: 398 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSSVVSFSLHKDQDQM 457
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R+ S L V++D V+ FFS KE GI +YS FN+ I T + + +YPA
Sbjct: 458 NIHSLSAERRSISSLSVNNDQVRQKFFSSDFSEKKEGGIPDYSEFNRIIGTGYCNLIYPA 517
Query: 541 IFHDTFNF--LAKRRR 582
I H+ +F LAKRRR
Sbjct: 518 ILHENSDFYLLAKRRR 533
[24][TOP]
>UniRef100_A9XW69 DNA-directed RNA polymerase (Fragment) n=1 Tax=Datisca cannabina
RepID=A9XW69_9ROSI
Length = 1280
Score = 262 bits (669), Expect = 2e-68
Identities = 132/198 (66%), Positives = 152/198 (76%), Gaps = 4/198 (2%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYTFN KERV+K
Sbjct: 348 FLCYIDLYVTIESEDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTFNFKERVRK 407
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLW+LSG SC+S + F L KDQDQI
Sbjct: 408 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWVLSGGSCKSSVVPFSLYKDQDQI 467
Query: 361 HLDSL----SNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHF 528
++ S+ S +R S L V++D V+ FFS KE+ I +YS N ICT H +
Sbjct: 468 NVHSISVEESVEERYISSLSVNNDQVRQKFFSSDLSGKKESTIPDYSELNGIICTGHCNL 527
Query: 529 MYPAIFHDTFNFLAKRRR 582
+YPAIF + LAKRRR
Sbjct: 528 LYPAIFKGNSDLLAKRRR 545
[25][TOP]
>UniRef100_A9XW46 DNA-directed RNA polymerase (Fragment) n=1 Tax=Aphloia theiformis
RepID=A9XW46_9ROSI
Length = 1273
Score = 262 bits (669), Expect = 2e-68
Identities = 132/194 (68%), Positives = 149/194 (76%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES D IHNV +PPKSFLLVQNDQYV+SEQVIAEI AGTYTF KERVQK
Sbjct: 350 FLCSIDLYVTIESEDSIHNVTIPPKSFLLVQNDQYVESEQVIAEISAGTYTF--KERVQK 407
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA +F YSNVH+LPKTSHLWILSG SCRS + F KDQDQ+
Sbjct: 408 HIYSDSEGEMHWSTDVYHAPKFAYSNVHLLPKTSHLWILSGGSCRSSAVPFSPHKDQDQM 467
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S+S +R S L V +D V H F S KE I +YS N+ ICT HS+F+YPA
Sbjct: 468 SIHSISVERRYISSLSVDNDQVIHKFCSSDFSGKKEVRIHDYSELNRMICTGHSNFIYPA 527
Query: 541 IFHDTFNFLAKRRR 582
I HD + LAKRRR
Sbjct: 528 ILHDNLDLLAKRRR 541
[26][TOP]
>UniRef100_A9XW93 DNA-directed RNA polymerase n=1 Tax=Liquidambar styraciflua
RepID=A9XW93_LIQST
Length = 1390
Score = 261 bits (667), Expect = 3e-68
Identities = 128/194 (65%), Positives = 150/194 (77%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVT+ES DI+HNV +P KSFLLVQNDQYV+SEQVIAEIRAGTYTFN KERV+K
Sbjct: 383 FLCYIDLYVTVESEDILHNVNIPQKSFLLVQNDQYVESEQVIAEIRAGTYTFNFKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF Y NVH+LPKTSHLWILSG SCRS + F L KDQDQ+
Sbjct: 443 HIYSDSEGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILSGGSCRSSVVPFSLHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R S L V++D V+H FS KE I +YS N+ IC+ H + +YPA
Sbjct: 503 NVHSLSVERRYISNLSVTNDQVRHKLFSSDISGKKEGRIPDYSELNRIICSGHCNLIYPA 562
Query: 541 IFHDTFNFLAKRRR 582
I + + LAKRRR
Sbjct: 563 ILRENSDLLAKRRR 576
[27][TOP]
>UniRef100_A9XW80 DNA-directed RNA polymerase n=2 Tax=Heuchera RepID=A9XW80_HEUSA
Length = 1376
Score = 261 bits (666), Expect = 4e-68
Identities = 125/194 (64%), Positives = 154/194 (79%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DIIHNV +PPKSF+LV+NDQYV+SEQVIAEIRAGT TFN KERV+K
Sbjct: 383 FLCSIDLYVTIESEDIIHNVNIPPKSFILVKNDQYVESEQVIAEIRAGTSTFNFKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GEMHWSTDVYHA EF Y NVH+LPKTSHLWILSG SCRS+ + F L KDQDQ+
Sbjct: 443 HIYSDSQGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILSGSSCRSNVVPFSLHKDQDQL 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS ++ S V++D V+H FS + I +YS N+ ICTDH +F+YPA
Sbjct: 503 NVHSLSVERKYISNFSVTNDQVRHKLFSSDRSGKR---IPDYSELNRIICTDHCNFIYPA 559
Query: 541 IFHDTFNFLAKRRR 582
I H+ ++ L+KRR+
Sbjct: 560 ILHENYDLLSKRRK 573
[28][TOP]
>UniRef100_A9XWA4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phyllanthus
calycinus RepID=A9XWA4_PHYCY
Length = 1271
Score = 260 bits (665), Expect = 5e-68
Identities = 129/194 (66%), Positives = 149/194 (76%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTI+S DI+HNV +PPKS LLVQNDQYV+SEQVIAEIRAGTY NLKERV+K
Sbjct: 348 FLCYIDLYVTIQSQDILHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYILNLKERVRK 407
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG CR + F L KDQDQI
Sbjct: 408 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGSLCRYSRVPFSLHKDQDQI 467
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS K S V+ D VKH FFS + KE+ +YS N+TICT H + +YPA
Sbjct: 468 NVHSLSIKKGYISNPSVNKDRVKHKFFSSELLGKKESRNLDYSELNRTICTVHCNLIYPA 527
Query: 541 IFHDTFNFLAKRRR 582
+ H+ + LAKRRR
Sbjct: 528 MLHENSDLLAKRRR 541
[29][TOP]
>UniRef100_A9XW78 DNA-directed RNA polymerase n=1 Tax=Gunnera manicata
RepID=A9XW78_9MAGN
Length = 1386
Score = 260 bits (665), Expect = 5e-68
Identities = 127/194 (65%), Positives = 147/194 (75%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGT T N KERV+K
Sbjct: 383 FLCYIDLYVTIESEDIIHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYH E+ Y NVH+LPKTSHLWILSG CRS + F L KDQDQ+
Sbjct: 443 HIYSDSEGEMHWSTDVYHVPEYTYGNVHLLPKTSHLWILSGGPCRSSVVSFSLHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R S ++ V+H FS + KE I +YS N+ ICT H +F+YPA
Sbjct: 503 NVHSLSVEQRYISNFSAINNQVRHKLFSSDLYGKKEGSIPDYSELNRIICTGHCNFIYPA 562
Query: 541 IFHDTFNFLAKRRR 582
I H+ F LAKRRR
Sbjct: 563 ILHENFYLLAKRRR 576
[30][TOP]
>UniRef100_A9XW49 DNA-directed RNA polymerase (Fragment) n=1 Tax=Begonia cucullata
RepID=A9XW49_9ROSI
Length = 1312
Score = 260 bits (665), Expect = 5e-68
Identities = 130/194 (67%), Positives = 152/194 (78%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DI+H V +PPKSFLLVQNDQYV+SEQVIAEIRAGTYTFN KERV+K
Sbjct: 352 FLCYIDLYVTIESEDILHKVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTFNFKERVRK 411
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLW+LSG CRS I L KDQDQI
Sbjct: 412 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWVLSGGCCRSRVIPSLY-KDQDQI 470
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R+ S L V++D V+H FFS F KE+GI NY N+ ICT + + +YP
Sbjct: 471 NVYSLSVEERSISILSVNNDQVRHKFFSSNLFGKKESGIPNYLELNRIICTGYCNLIYPW 530
Query: 541 IFHDTFNFLAKRRR 582
IF + LA++RR
Sbjct: 531 IFQGNCDLLARKRR 544
[31][TOP]
>UniRef100_A9XW97 DNA-directed RNA polymerase (Fragment) n=1 Tax=Morella cerifera
RepID=A9XW97_MYRCE
Length = 1274
Score = 260 bits (664), Expect = 6e-68
Identities = 129/196 (65%), Positives = 153/196 (78%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LY+TIES DIIHNV +PPKSFLLVQNDQY++SEQVIAEIRAGTYT N KERV+K
Sbjct: 348 FLCYIDLYITIESEDIIHNVTIPPKSFLLVQNDQYIQSEQVIAEIRAGTYTLNFKERVRK 407
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS + F L+KDQDQI
Sbjct: 408 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSSVVPFSLQKDQDQI 467
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFA--TKETGISNYSIFNQTICTDHSHFMY 534
++ SLS R++S L ++D V+ FFS F KE+ I +Y N+ IC H + +Y
Sbjct: 468 NVHSLSVKGRSSSSLSGNNDKVRQKFFSSDLFGKKKKESRIPDYLELNRIICIGHCNLIY 527
Query: 535 PAIFHDTFNFLAKRRR 582
PAI ++ + LAKRRR
Sbjct: 528 PAILYENSDLLAKRRR 543
[32][TOP]
>UniRef100_A9XWB3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Schinus
terebinthifolius RepID=A9XWB3_9ROSI
Length = 1281
Score = 259 bits (662), Expect = 1e-67
Identities = 128/194 (65%), Positives = 152/194 (78%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYV IES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYT N KE+V+K
Sbjct: 350 FLCSIDLYVIIESEDIMHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTLNFKEKVRK 409
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIY+DSEGEMHWSTDVYHA +F YSNVH+LPKTSHLWILSG SCRS + F L DQD+I
Sbjct: 410 HIYADSEGEMHWSTDVYHAPKFTYSNVHLLPKTSHLWILSGGSCRSSVVSFSLHTDQDEI 469
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++DSLS +R S L V++D +H FS KE GI +YS FN+TI T + ++PA
Sbjct: 470 NIDSLSVERRFFSNLSVNNDQARHKLFSSDFSDKKEGGIPDYSGFNRTIGTGPCNLLHPA 529
Query: 541 IFHDTFNFLAKRRR 582
IFH + LAKRRR
Sbjct: 530 IFHKHSDLLAKRRR 543
[33][TOP]
>UniRef100_A9XWC2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tapiscia sinensis
RepID=A9XWC2_9ROSI
Length = 1280
Score = 257 bits (656), Expect = 5e-67
Identities = 127/194 (65%), Positives = 149/194 (76%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC ++LYV IES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTY FN KERV+K
Sbjct: 350 FLCYMDLYVIIESEDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYPFNFKERVRK 409
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSD EGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS + F L KDQDQ+
Sbjct: 410 HIYSDLEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSSVVPFSLHKDQDQM 469
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R S L V++D V+H FS KE I +YS N+ + T H + +Y A
Sbjct: 470 NIHSLSVERRYISSLAVNNDQVRHGLFSSDFSDKKEGRIPDYSELNRILGTGHCNLIYSA 529
Query: 541 IFHDTFNFLAKRRR 582
I H+ ++ LAKRRR
Sbjct: 530 ILHENYDLLAKRRR 543
[34][TOP]
>UniRef100_Q4VZP3 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Cucumis sativus
RepID=RPOC2_CUCSA
Length = 1394
Score = 256 bits (655), Expect = 7e-67
Identities = 129/194 (66%), Positives = 145/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKS LLVQNDQYV+SEQVIAEIRAGTYT NLKERV+K
Sbjct: 383 FLCYIDLYVTIESEDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SC + F L KDQDQI
Sbjct: 443 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCGCSLVPFSLYKDQDQI 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SL +R S L V++D V F+ E GI +YS N +CT S+ YPA
Sbjct: 503 NVHSLCVERRYISSLSVNNDKVGQKFYGPDLSGKNENGIPDYSELNPILCTGQSNLTYPA 562
Query: 541 IFHDTFNFLAKRRR 582
IFH + LAKRRR
Sbjct: 563 IFHGNSDLLAKRRR 576
[35][TOP]
>UniRef100_A9XW63 DNA-directed RNA polymerase (Fragment) n=1 Tax=Connarus
conchocarpus RepID=A9XW63_9ROSI
Length = 1277
Score = 256 bits (654), Expect = 9e-67
Identities = 127/194 (65%), Positives = 152/194 (78%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I++YVTIES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYTFN K RV+K
Sbjct: 352 FLCYIDVYVTIESEDILHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTFNFKGRVRK 411
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIY+DSEGEMHWSTDVYHA EF YSNV++LPKTSHLWIL+G S RS + F L KDQDQ+
Sbjct: 412 HIYADSEGEMHWSTDVYHAPEFTYSNVYLLPKTSHLWILAGVSGRSSGVPFSLPKDQDQM 471
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+L SLS +R S L V++D V+H FFS KE+ I +YS N+ ICT H + + PA
Sbjct: 472 NLHSLSVERRCISILSVNNDQVRHKFFSSDLSGKKESTIPHYSELNRVICTGHCNLIDPA 531
Query: 541 IFHDTFNFLAKRRR 582
I H+ + +AKRRR
Sbjct: 532 ILHENSDLVAKRRR 545
[36][TOP]
>UniRef100_A9XWC5 DNA-directed RNA polymerase n=2 Tax=Trochodendron aralioides
RepID=A9XWC5_TROAR
Length = 1381
Score = 256 bits (653), Expect = 1e-66
Identities = 127/194 (65%), Positives = 148/194 (76%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGT T N KE+V+K
Sbjct: 383 FLCYIDLYVTIESQDIIHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG CRS + F L KDQDQ+
Sbjct: 443 HIYSDSKGEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGGPCRSSIVPFSLHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS + S L V++D VKH FSF K I +YS N+ IC H +F+YPA
Sbjct: 503 NVQSLSVERTYISNLSVTNDQVKHKLFSFDPSGKKGGRILDYSGPNRIICNGHCNFIYPA 562
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 563 ILHENSDLLAKRRR 576
[37][TOP]
>UniRef100_A9XW60 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cephalotus
follicularis RepID=A9XW60_CEPFO
Length = 1257
Score = 255 bits (651), Expect = 2e-66
Identities = 123/194 (63%), Positives = 151/194 (77%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIE DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIR GTYTFN KERV+K
Sbjct: 349 FLCYIDLYVTIEGEDILHNVTIPPKSFLLVQNDQYVESEQVIAEIRTGTYTFNFKERVRK 408
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWST+VYHA EF YSNVH+LP+TSHLWIL+G SC+ + F L+KDQDQ+
Sbjct: 409 HIYSDSEGEMHWSTNVYHAPEFKYSNVHLLPQTSHLWILAGGSCKFGVVPFSLQKDQDQM 468
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R L V++D V+H F S KE+ I +YS N+ CTD+S+ +YPA
Sbjct: 469 NVHSLSVERRYIFSLSVNNDQVRHKFLSSDLSGKKESRIPHYSELNRIKCTDYSNLIYPA 528
Query: 541 IFHDTFNFLAKRRR 582
I + + LAKRR+
Sbjct: 529 ILQENSDLLAKRRK 542
[38][TOP]
>UniRef100_A4GYP8 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Populus
trichocarpa RepID=RPOC2_POPTR
Length = 1390
Score = 254 bits (649), Expect = 3e-66
Identities = 129/196 (65%), Positives = 153/196 (78%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+++LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIR+GTYT N ERV+K
Sbjct: 379 FLCSMDLYVTIESQDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRSGTYTLNFTERVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHASEF YSNVH+LPKTSHLWILSG SCRS + F L KDQDQI
Sbjct: 439 HIYSDSEGEMHWSTDVYHASEFTYSNVHLLPKTSHLWILSGGSCRSSIVPFSLHKDQDQI 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFS--FKTFATKETGISNYSIFNQTICTDHSHFMY 534
++ SLS + S V++D VKH FFS + + K++ I +YS N+ ICT F+Y
Sbjct: 499 NVHSLSVERGYISNPSVNNDKVKHKFFSSYLSSKSKKKSRILDYSDLNRMICTG---FIY 555
Query: 535 PAIFHDTFNFLAKRRR 582
P I H+ + LAKRR+
Sbjct: 556 PTILHENSDLLAKRRK 571
[39][TOP]
>UniRef100_Q0G9M9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Liriodendron
tulipifera RepID=RPOC2_LIRTU
Length = 1382
Score = 254 bits (648), Expect = 5e-66
Identities = 126/194 (64%), Positives = 149/194 (76%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGT TFN KERV+K
Sbjct: 382 FLCYIDLYVTIESQDIIHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVRK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG CRS + F L KDQDQ+
Sbjct: 442 HIYSDSEGEMHWSTDVYHAPEYRYGNVHLLPKTSHLWILSGGPCRSSIVPFSLHKDQDQM 501
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R S L V++D V+H FS K+ I +YS ++ + H +F+YPA
Sbjct: 502 NVHSLSVERRYISDLSVTNDRVRHKLFSSDPSGKKKERILDYSGPDRIVSNGHWNFLYPA 561
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 562 ILHENSDLLAKRRR 575
[40][TOP]
>UniRef100_A9XW96 DNA-directed RNA polymerase (Fragment) n=1 Tax=Melianthus comosus
RepID=A9XW96_9ROSI
Length = 1267
Score = 253 bits (647), Expect = 6e-66
Identities = 126/196 (64%), Positives = 148/196 (75%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F+C I+LYVTIES DIIHNV +PPKSF+LVQNDQYV+SEQVIAEIRAGT TFN KE+V+K
Sbjct: 337 FICYIDLYVTIESEDIIHNVTIPPKSFILVQNDQYVESEQVIAEIRAGTDTFNFKEKVRK 396
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS + F L KDQDQ+
Sbjct: 397 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSSGVPFSLHKDQDQM 456
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKE--TGISNYSIFNQTICTDHSHFMY 534
++ SLS +R S V+ D V++ FF + + I NYS Q CTDH + +Y
Sbjct: 457 NIPSLSVDRRYISSPSVNTDQVRYKFFRSDPYGKNKGRIPIPNYSEQKQIKCTDHLNLIY 516
Query: 535 PAIFHDTFNFLAKRRR 582
P I H+ F +AKRRR
Sbjct: 517 PVILHENFYLVAKRRR 532
[41][TOP]
>UniRef100_B5AGZ9 DNA-directed RNA polymerase n=1 Tax=Gonystylus bancanus
RepID=B5AGZ9_9ROSI
Length = 1370
Score = 253 bits (646), Expect = 8e-66
Identities = 123/194 (63%), Positives = 147/194 (75%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC ++LYV IES DI+H V +PPKSFLLVQN QY+KSEQVIAEIRAGTYTFN KERV+K
Sbjct: 379 FLCYMDLYVIIESEDIMHKVTIPPKSFLLVQNGQYIKSEQVIAEIRAGTYTFNFKERVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYH +EF YSN+H+LPKTSHLWILSG SC+ + F L KDQDQI
Sbjct: 439 HIYSDSEGEMHWSTDVYHLAEFTYSNLHLLPKTSHLWILSGGSCKFSIVPFSLHKDQDQI 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ S+S +R S L V++D +H FFS F KE IS+YS N+ + T H HF+Y
Sbjct: 499 NIHSISAERRYISSLSVNNDQERHKFFSSDFFDKKEGRISDYSELNRIVGTGHYHFIYST 558
Query: 541 IFHDTFNFLAKRRR 582
+ + LAKRRR
Sbjct: 559 LLRENSYLLAKRRR 572
[42][TOP]
>UniRef100_A9XW53 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bursera simaruba
RepID=A9XW53_9ROSI
Length = 1274
Score = 253 bits (646), Expect = 8e-66
Identities = 126/194 (64%), Positives = 148/194 (76%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+ +LYV IES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYT N KERV+K
Sbjct: 352 FLCSTDLYVIIESEDIMHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTLNFKERVRK 411
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIY+DSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS I F + KDQDQ+
Sbjct: 412 HIYADSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGDSCRSGVISFSIHKDQDQM 471
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS + S L V++D V+H S KE GI +YS FN+ I T H + ++PA
Sbjct: 472 NIHSLSVERNYISSLSVNNDQVRHKLLSSDFSDKKEGGIPDYSGFNRIIGTGHCNCIHPA 531
Query: 541 IFHDTFNFLAKRRR 582
I + LAKRRR
Sbjct: 532 ILDKNSDLLAKRRR 545
[43][TOP]
>UniRef100_A9XWB2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ruptiliocarpon
caracolito RepID=A9XWB2_9ROSI
Length = 988
Score = 253 bits (645), Expect = 1e-65
Identities = 128/196 (65%), Positives = 152/196 (77%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DI HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYT N KERV+K
Sbjct: 316 FLCYIDLYVTIESEDITHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTLNFKERVRK 375
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRS--DTIHFLLRKDQD 354
HIYSDSEGEMHWST+VYH EF YSNVH+LP+TSHLWILSG SCRS + F + KDQD
Sbjct: 376 HIYSDSEGEMHWSTNVYHTPEFAYSNVHLLPRTSHLWILSGSSCRSRASVVPFSIHKDQD 435
Query: 355 QIHLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMY 534
Q+H SL+ R S V++D V+H FFS + + K++ I +YS N+ ICT H +F+Y
Sbjct: 436 QVH--SLTVEGRYISSFSVNNDQVRHRFFS--SASKKKSKIPDYSELNRIICTGHCNFVY 491
Query: 535 PAIFHDTFNFLAKRRR 582
PAI + + N LAKRRR
Sbjct: 492 PAIHYGSSNLLAKRRR 507
[44][TOP]
>UniRef100_A9XW65 DNA-directed RNA polymerase n=1 Tax=Cornus florida
RepID=A9XW65_CORFO
Length = 1391
Score = 253 bits (645), Expect = 1e-65
Identities = 125/194 (64%), Positives = 147/194 (75%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DIIHNV +PP+SFLLVQNDQYV+SEQVIAEIRAGT T N KERV+K
Sbjct: 383 FLCSIDLYVTIESEDIIHNVNIPPQSFLLVQNDQYVESEQVIAEIRAGTSTLNFKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF Y NV +LPKTSHLWILSG+ CRS L KDQD++
Sbjct: 443 HIYSDSEGEMHWSTDVYHAPEFTYGNVQLLPKTSHLWILSGRPCRSSLASLSLHKDQDKM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ SLS +R S L V++D +H FFS ++ I +YS N+ ICT H + YPA
Sbjct: 503 NAHSLSVKRRYISNLSVTNDQARHKFFSSDFSGKQQDRIPDYSERNRIICTGHCNLTYPA 562
Query: 541 IFHDTFNFLAKRRR 582
IFH+ + LAKRRR
Sbjct: 563 IFHENSDLLAKRRR 576
[45][TOP]
>UniRef100_A9XW58 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ceanothus prostratus
RepID=A9XW58_9ROSA
Length = 1281
Score = 252 bits (643), Expect = 2e-65
Identities = 129/199 (64%), Positives = 152/199 (76%), Gaps = 5/199 (2%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I++YVTIES DIIHNV +PPKSF+LVQNDQYV+SEQVIAEIRAGTYT N KE+V+K
Sbjct: 352 FLCYIDVYVTIESEDIIHNVTIPPKSFILVQNDQYVESEQVIAEIRAGTYTLNFKEKVRK 411
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS + L KDQDQ
Sbjct: 412 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGDSCRSSVVPLSLHKDQDQT 471
Query: 361 HLDSLS---NGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFM 531
++ LS N + S V++D VKH FFSF KE+ IS+YS FN+ I H +F+
Sbjct: 472 NVHFLSAEGNFFSSLSGNPVNNDQVKHKFFSFGLSGKKESIISDYSEFNRIIYKGHCNFI 531
Query: 532 YPAIFHDTFN--FLAKRRR 582
+P+I H+ + LAKRRR
Sbjct: 532 FPSILHENSDLFLLAKRRR 550
[46][TOP]
>UniRef100_Q14FG7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Populus alba
RepID=RPOC2_POPAL
Length = 1390
Score = 252 bits (643), Expect = 2e-65
Identities = 128/196 (65%), Positives = 152/196 (77%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+++LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIR+GTYT N ERV+K
Sbjct: 379 FLCSMDLYVTIESQDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRSGTYTLNFTERVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHASEF YSNVH+LPKTSHLWILSG SCRS + F L KDQDQI
Sbjct: 439 HIYSDSEGEMHWSTDVYHASEFTYSNVHLLPKTSHLWILSGGSCRSSIVPFSLHKDQDQI 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFS--FKTFATKETGISNYSIFNQTICTDHSHFMY 534
++ SLS + S ++D VKH FFS + + K++ I +YS N+ ICT F+Y
Sbjct: 499 NVHSLSVERGYISNPSENNDKVKHKFFSSYLSSKSKKKSRILDYSDLNRIICTG---FIY 555
Query: 535 PAIFHDTFNFLAKRRR 582
P I H+ + LAKRR+
Sbjct: 556 PTILHENSDLLAKRRK 571
[47][TOP]
>UniRef100_A9XW40 DNA-directed RNA polymerase n=1 Tax=Berberidopsis corallina
RepID=A9XW40_9MAGN
Length = 1389
Score = 251 bits (640), Expect = 4e-65
Identities = 126/194 (64%), Positives = 147/194 (75%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGT T N KERV+K
Sbjct: 383 FLCYIDLYVTIESEDILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF Y NVH+LPKTSHLWILSG CRS F L KDQDQ+
Sbjct: 443 HIYSDSEGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILSGGPCRSSVAPFSLHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R S L V++D V+H FFS KE I +YS N+ I T + +YPA
Sbjct: 503 NVHSLSVERRYISNLSVTNDQVRHKFFSSYFSGKKEGRIPDYSELNRIIGTSRCNLIYPA 562
Query: 541 IFHDTFNFLAKRRR 582
I ++ + LAKRR+
Sbjct: 563 ILYENSDLLAKRRK 576
[48][TOP]
>UniRef100_A9XW88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixonanthes icosandra
x Ixonanthes cuneata RepID=A9XW88_9ROSI
Length = 1262
Score = 250 bits (638), Expect = 7e-65
Identities = 124/194 (63%), Positives = 145/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIH V +PPKSFLLVQNDQYV+SEQVIAEIR TYT N E+V+K
Sbjct: 350 FLCYIDLYVTIESQDIIHKVTIPPKSFLLVQNDQYVESEQVIAEIRGETYTLNFTEKVRK 409
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA E YSNVH+LPKTSHLWILSG CR + + F L KDQDQ+
Sbjct: 410 HIYSDSEGEMHWSTDVYHAPEVTYSNVHLLPKTSHLWILSGGLCRYNIVPFSLHKDQDQM 469
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ SLS +R S V++D VKH F S K++ I +YS N+ ICT H + +YPA
Sbjct: 470 SVRSLSVERRYISSPSVNNDQVKHKFLSSDLSGKKDSRIPDYSELNRIICTGHCNLIYPA 529
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 530 ILHENSDLLAKRRR 543
[49][TOP]
>UniRef100_Q09X27 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Morus indica
RepID=RPOC2_MORIN
Length = 1389
Score = 249 bits (637), Expect = 9e-65
Identities = 128/200 (64%), Positives = 153/200 (76%), Gaps = 6/200 (3%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DIIHNV +PPKSF+LVQNDQYV+SEQVIAEIRAGTYTF+ KERV+K
Sbjct: 383 FLCSIDLYVTIESEDIIHNVTIPPKSFILVQNDQYVESEQVIAEIRAGTYTFHFKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA +F YSNVH+LPKTSHLWILSG S +S + F + KDQDQ
Sbjct: 443 HIYSDSEGEMHWSTDVYHAPDFTYSNVHLLPKTSHLWILSGGSYKSSVVPFSIHKDQDQT 502
Query: 361 HLDSLSNGK---RNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFM 531
++ LS K RN+ + D KH FF+ KE+GI +YS FN+ + TDHS+ +
Sbjct: 503 NVYFLSAAKGKARNSFSVNNDQDQGKHKFFTSGLSGKKESGIPDYSEFNRILDTDHSNLI 562
Query: 532 YPAIFH---DTFNFLAKRRR 582
+P+I H D F LAKRRR
Sbjct: 563 FPSILHKDSDLF-LLAKRRR 581
[50][TOP]
>UniRef100_A9XW94 DNA-directed RNA polymerase (Fragment) n=1 Tax=Lythrum flagellare
RepID=A9XW94_9MYRT
Length = 1283
Score = 249 bits (636), Expect = 1e-64
Identities = 127/195 (65%), Positives = 151/195 (77%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+L VTIES DIIHNV +PPKSFLLVQN+QYV+SEQVIAEIRAGT TFN KERV+K
Sbjct: 350 FLCSIDLDVTIESEDIIHNVTIPPKSFLLVQNNQYVESEQVIAEIRAGTSTFNFKERVRK 409
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SC S+ + F L KDQDQ+
Sbjct: 410 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCVSNGVPFSLHKDQDQM 469
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPF-FSFKTFATKETGISNYSIFNQTICTDHSHFMYP 537
+L SLS +R S L V++D +++ S+ + KE YS N+ ICT H + +YP
Sbjct: 470 NLRSLSVKQRYLSSLSVNNDQIRYKLGSSYFSGKKKEDRSPYYSEINRIICTGHCNLIYP 529
Query: 538 AIFHDTFNFLAKRRR 582
AI H+ + LAKRRR
Sbjct: 530 AILHENSDLLAKRRR 544
[51][TOP]
>UniRef100_A9XWA8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Qualea parviflora
RepID=A9XWA8_9MYRT
Length = 1272
Score = 249 bits (635), Expect = 1e-64
Identities = 125/195 (64%), Positives = 147/195 (75%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+HNV +PPKSFLLVQN+QYV+SEQVIAEIRAG YTFNLKERV+K
Sbjct: 349 FLCSIDLYVTIESEDILHNVTIPPKSFLLVQNNQYVESEQVIAEIRAGAYTFNLKERVRK 408
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS I F L KDQDQ+
Sbjct: 409 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSSEIPFSLHKDQDQM 468
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTF-ATKETGISNYSIFNQTICTDHSHFMYP 537
+L S +RN S L V++D +++ S + K I +YS N+ I T H + Y
Sbjct: 469 NLRSTERERRNISSLLVNNDQMRYKLLSSDFYDKIKGDKIPDYSELNRIISTVHCNLKYL 528
Query: 538 AIFHDTFNFLAKRRR 582
H+ + LAKRRR
Sbjct: 529 TTLHENSDLLAKRRR 543
[52][TOP]
>UniRef100_A9XW56 DNA-directed RNA polymerase (Fragment) n=1 Tax=Capparis flexuosa
RepID=A9XW56_CAPFL
Length = 1263
Score = 249 bits (635), Expect = 1e-64
Identities = 125/194 (64%), Positives = 148/194 (76%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEIR GTYTF+ KERV+K
Sbjct: 348 FLCYIDLSVIIESEDIIHSVTIPPKSFLLVQNDQYVESEQVIAEIREGTYTFHFKERVRK 407
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWS DVYHA EF YSNVHILPKTSHLWIL G SC S I F + KDQDQ+
Sbjct: 408 HIYSDSEGEMHWSIDVYHAPEFTYSNVHILPKTSHLWILLGGSCGSSLILFSIHKDQDQM 467
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS +++ S L V++D + H FFS K++GI +YS N I T HS+ +Y A
Sbjct: 468 NIPFLSVERKSISNLSVNNDQLSHKFFSSDFSDKKKSGIPDYSELNGIIGTSHSNLIYSA 527
Query: 541 IFHDTFNFLAKRRR 582
IFH+ + LAKRRR
Sbjct: 528 IFHENSDLLAKRRR 541
[53][TOP]
>UniRef100_A9XWB4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Securidaca
diversifolia RepID=A9XWB4_SECDI
Length = 1329
Score = 248 bits (634), Expect = 2e-64
Identities = 126/194 (64%), Positives = 143/194 (73%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +P KSFLLVQNDQYV+SEQVIAEIRAGTYTF+ KERVQK
Sbjct: 348 FLCYIDLYVTIESEDIIHNVTIPQKSFLLVQNDQYVESEQVIAEIRAGTYTFHFKERVQK 407
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWST+VY EF YSNVHILP+TSHLWILSG SC+ + F L KDQDQ
Sbjct: 408 HIYSDSEGEMHWSTEVYRVPEFTYSNVHILPRTSHLWILSGGSCKPGAVPFSLHKDQDQT 467
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ S R S L V +D V+ FFSF KE+GI +YS N+ I H + YP
Sbjct: 468 NIHFPSASGRYISNLSVRNDQVRRKFFSFHLSDKKESGIPDYSDLNRIIWEGHWNLKYPP 527
Query: 541 IFHDTFNFLAKRRR 582
I H +FLAKRRR
Sbjct: 528 IRHKDLDFLAKRRR 541
[54][TOP]
>UniRef100_A9XWC4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Thymelaea sanamunda
RepID=A9XWC4_9ROSI
Length = 1285
Score = 248 bits (633), Expect = 2e-64
Identities = 121/194 (62%), Positives = 144/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+++LYV I+S DI+H V +PPKSFLLVQN QYVKSEQVIAEIRAGTYTFN KERV+K
Sbjct: 349 FLCSMDLYVIIKSEDILHEVTIPPKSFLLVQNGQYVKSEQVIAEIRAGTYTFNFKERVRK 408
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSD EGEMHWST+VYH EF YSNVH+LPKTSHLWILSG SC+ + + F L KDQDQI
Sbjct: 409 HIYSDLEGEMHWSTNVYHLPEFKYSNVHLLPKTSHLWILSGGSCKFNVVPFSLHKDQDQI 468
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ S S +R S V+DD +H F S F KE + +YS FN+ + T H HF+Y
Sbjct: 469 NIHSTSTERRYISSFSVNDDQERHKFLSSDFFDKKEDILFDYSKFNRIVGTGHYHFLYST 528
Query: 541 IFHDTFNFLAKRRR 582
I + LAKRRR
Sbjct: 529 ILRENSYLLAKRRR 542
[55][TOP]
>UniRef100_A9XWB5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spiraea tomentosa
RepID=A9XWB5_9ROSA
Length = 1264
Score = 248 bits (632), Expect = 3e-64
Identities = 129/196 (65%), Positives = 147/196 (75%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTI S +IIHNV +PPKS +LVQNDQYV+SEQVIAEIRAGTYT N KERV+K
Sbjct: 349 FLCYIDLYVTIRSENIIHNVTIPPKSLILVQNDQYVESEQVIAEIRAGTYTLNFKERVRK 408
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS + F L KDQDQ
Sbjct: 409 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSSAVPFSLHKDQDQT 468
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS R S L V++D VKH S KE+ I +YS FN+ I T H ++PA
Sbjct: 469 NVHSLSAEGRYISSLSVNNDQVKHK--SLNLSGKKESSIPDYSEFNRIIYT--GHLIFPA 524
Query: 541 IFHDTFNF--LAKRRR 582
I HD +F L KRRR
Sbjct: 525 ILHDNSDFFLLTKRRR 540
[56][TOP]
>UniRef100_Q0ZJ30 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Vitis vinifera
RepID=RPOC2_VITVI
Length = 1394
Score = 248 bits (632), Expect = 3e-64
Identities = 127/194 (65%), Positives = 144/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES IIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYTFN KERV+K
Sbjct: 383 FLCYIDLYVTIESEGIIHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTYTFNFKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF Y NVH+LPKTSHLWILSG SCR + F + KDQDQ+
Sbjct: 443 HIYSDSEGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILSGGSCRFSIVPFSIHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ SLS +R S V++D V H FFS KE I YS N+ I T + + PA
Sbjct: 503 SVRSLSVERRYISNPSVTNDQVIHEFFSSDLSGKKEGRIPAYSELNRIIYTGRYNLIDPA 562
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 563 ILHENSDLLAKRRR 576
[57][TOP]
>UniRef100_A9XWC6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tropaeolum majus
RepID=A9XWC6_TROMA
Length = 1274
Score = 247 bits (631), Expect = 4e-64
Identities = 124/194 (63%), Positives = 148/194 (76%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L + IES DIIH V +PPKSFLLVQNDQYV+SEQVIAEIRAGTYTF KERV+K
Sbjct: 348 FLCYIDLSIIIESEDIIHTVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTFYFKERVRK 407
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG C SD + F L KDQDQ+
Sbjct: 408 HIYSNSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGLCGSDLLPFSLHKDQDQM 467
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+++SLS +R S L V++D V+H FFS K+ I++Y FN+ I H + +Y A
Sbjct: 468 NINSLSVERRYISSLSVNNDQVRHKFFSSGFSDKKKCRIADYLEFNRIIGIGHCNLIYSA 527
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 528 ILHENSDLLAKRRR 541
[58][TOP]
>UniRef100_A9XWA1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ochna mossambicensis
RepID=A9XWA1_9ROSI
Length = 1268
Score = 247 bits (630), Expect = 6e-64
Identities = 127/194 (65%), Positives = 149/194 (76%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAG YT N KERV+K
Sbjct: 351 FLCYIDLYVTIESQDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGAYTLNFKERVRK 410
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSD EGEMHWST+VYHA EF YSNVH LPKTSHLWILSG SC+ + F L KDQDQ+
Sbjct: 411 HIYSDLEGEMHWSTNVYHAPEFTYSNVHFLPKTSHLWILSGGSCKFSKVPFSLHKDQDQM 470
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R +SP V++D +KH FFS K++ I + S NQ I T H + +YPA
Sbjct: 471 NVHSLS-VERISSP-SVNNDQLKHKFFSSDLSGKKQSVIPDSSELNQIIWTGHCNLIYPA 528
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 529 IPHENSDLLAKRRR 542
[59][TOP]
>UniRef100_A9XW98 DNA-directed RNA polymerase (Fragment) n=1 Tax=Myrtus communis
RepID=A9XW98_9MYRT
Length = 1284
Score = 247 bits (630), Expect = 6e-64
Identities = 124/195 (63%), Positives = 151/195 (77%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+HNV +PPKSFLLVQN+QYV+SEQVIAEIRA TYTFNLKERV+K
Sbjct: 353 FLCSIDLYVTIESEDILHNVTIPPKSFLLVQNNQYVESEQVIAEIRAETYTFNLKERVRK 412
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS + F L KDQDQ+
Sbjct: 413 HIYSESEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSSGVPFSLYKDQDQM 472
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFK-TFATKETGISNYSIFNQTICTDHSHFMYP 537
+L SLS +R S L +++D +++ S + KE I +YS N+ + H + YP
Sbjct: 473 NLRSLSVKRRYISSLSMNNDQMRYELCSSSFSGKLKEDRIPDYSELNRILSIVHCNLKYP 532
Query: 538 AIFHDTFNFLAKRRR 582
FH+ +FLA+RRR
Sbjct: 533 TTFHENSDFLAQRRR 547
[60][TOP]
>UniRef100_A9XW57 DNA-directed RNA polymerase (Fragment) n=1 Tax=Carica papaya
RepID=A9XW57_CARPA
Length = 1163
Score = 247 bits (630), Expect = 6e-64
Identities = 124/194 (63%), Positives = 148/194 (76%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYT N KERV+K
Sbjct: 353 FLCYIDLSVVIESEDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTLNYKERVRK 412
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG S RS + F L KDQDQ+
Sbjct: 413 HIYSNSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSSRSSLVPFSLHKDQDQM 472
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS + + S L V++D +H FFS K+ GI +YS F++ + T H + +Y A
Sbjct: 473 NIHSLSVEQESISSLAVNNDQGRHKFFSSNFSDKKKCGIPDYSEFHRILDTGHCNLIYFA 532
Query: 541 IFHDTFNFLAKRRR 582
H+ + LAKRRR
Sbjct: 533 SLHENSDLLAKRRR 546
[61][TOP]
>UniRef100_A9XW43 DNA-directed RNA polymerase (Fragment) n=1 Tax=Alnus viridis subsp.
sinuata RepID=A9XW43_ALNVI
Length = 1273
Score = 247 bits (630), Expect = 6e-64
Identities = 130/198 (65%), Positives = 151/198 (76%), Gaps = 4/198 (2%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYTFN KERV+K
Sbjct: 349 FLCYIDLYVTIESEDIIHNVTIPPKSFLLVQNDQYVQSEQVIAEIRAGTYTFNFKERVRK 408
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS + FLL+KDQDQI
Sbjct: 409 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSSVVPFLLQKDQDQI 468
Query: 361 HLDSLSNG--KRNTSPLFVSDDHVKHPFFSFKTFA--TKETGISNYSIFNQTICTDHSHF 528
++ SLS R S L ++ V+ FFS F KE+GI +YS ++ +
Sbjct: 469 NVHSLSLSVEGRFLSSLSGKNNQVRQKFFSSDLFGKKKKESGIPDYSKLSR------CNL 522
Query: 529 MYPAIFHDTFNFLAKRRR 582
+YPAI ++ + LAKRRR
Sbjct: 523 IYPAILYENSDLLAKRRR 540
[62][TOP]
>UniRef100_B1A925 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Carica papaya
RepID=RPOC2_CARPA
Length = 1387
Score = 247 bits (630), Expect = 6e-64
Identities = 124/194 (63%), Positives = 148/194 (76%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYT N KERV+K
Sbjct: 379 FLCYIDLSVVIESEDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTLNYKERVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG S RS + F L KDQDQ+
Sbjct: 439 HIYSNSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSSRSSLVPFSLHKDQDQM 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS + + S L V++D +H FFS K+ GI +YS F++ + T H + +Y A
Sbjct: 499 NIHSLSVEQESISSLAVNNDQGRHKFFSSNFSDKKKCGIPDYSEFHRILDTGHCNLIYFA 558
Query: 541 IFHDTFNFLAKRRR 582
H+ + LAKRRR
Sbjct: 559 SLHENSDLLAKRRR 572
[63][TOP]
>UniRef100_A9XWA2 DNA-directed RNA polymerase n=1 Tax=Oxalis latifolia
RepID=A9XWA2_9ROSI
Length = 1370
Score = 246 bits (629), Expect = 7e-64
Identities = 121/194 (62%), Positives = 149/194 (76%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I++YVTIES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYTF KERV+K
Sbjct: 379 FLCYIDVYVTIESEDILHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTF--KERVRK 436
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHW+TDVYHA EF YSNVH+LPKTSHLWIL+G S R+ + F L KDQDQ+
Sbjct: 437 HIYSDSEGEMHWNTDVYHAPEFTYSNVHLLPKTSHLWILTGASGRASGVPFSLHKDQDQM 496
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ S S +R S L +++D V+H FFS F KE+ I +YS N+ +C + + PA
Sbjct: 497 NVHSSSVERRCNSRLSINNDQVRHKFFSSNLFGKKESRIPHYSELNRVLCIGRCNLIDPA 556
Query: 541 IFHDTFNFLAKRRR 582
+ H+ +AKRRR
Sbjct: 557 LLHENSYLMAKRRR 570
[64][TOP]
>UniRef100_A9XW99 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neurada procumbens
RepID=A9XW99_9ROSI
Length = 1265
Score = 246 bits (629), Expect = 7e-64
Identities = 125/195 (64%), Positives = 148/195 (75%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYV IES D+IH V +PPKSFLLVQNDQYV+SEQVIAEIRAGTYT N KERV+K
Sbjct: 349 FLCYIDLYVIIESEDLIHKVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTLNFKERVRK 408
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYH+ EF YSNVH+LPKTSHLWILSG SC+ + F L KDQDQ+
Sbjct: 409 HIYSDSEGEMHWSTDVYHSPEFTYSNVHLLPKTSHLWILSGGSCKFSIVPFSLHKDQDQL 468
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTIC-TDHSHFMYP 537
+++SLS +R S L V++D V++ F KE GIS YS N+ I T HS+ Y
Sbjct: 469 NINSLSVERRYISSLSVNNDQVRYKLFRSVFSEKKEGGISYYSELNRIIIGTGHSNLTYS 528
Query: 538 AIFHDTFNFLAKRRR 582
AI ++ + LAKRRR
Sbjct: 529 AISYENSDLLAKRRR 543
[65][TOP]
>UniRef100_A9XW45 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anisoptera marginata
RepID=A9XW45_9ROSI
Length = 1259
Score = 246 bits (629), Expect = 7e-64
Identities = 124/194 (63%), Positives = 150/194 (77%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC ++LYV IES DIIH V +PPKSFLLVQN+QYV+SEQVIAEIRAGTYTFN KERV+K
Sbjct: 350 FLCYMDLYVIIESEDIIHKVTIPPKSFLLVQNNQYVESEQVIAEIRAGTYTFNFKERVRK 409
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HI SDSEGEMHWSTDVYH+ EF YSNVH+LPKTSHLWILSG SC+ + F L KDQDQI
Sbjct: 410 HIXSDSEGEMHWSTDVYHSPEFTYSNVHLLPKTSHLWILSGGSCKFSVVPFSLHKDQDQI 469
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R+ S L V++D+V+H FFS KE IS+YS + + + S+F+Y A
Sbjct: 470 NVHSLSAEQRSNSSLSVNNDNVRHKFFSPDFSDKKEGRISDYS---ELMGNEQSNFIYSA 526
Query: 541 IFHDTFNFLAKRRR 582
I H+ + L KRRR
Sbjct: 527 ILHENSDLLGKRRR 540
[66][TOP]
>UniRef100_A6MMB2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Chloranthus
spicatus RepID=RPOC2_CHLSC
Length = 1389
Score = 246 bits (629), Expect = 7e-64
Identities = 125/196 (63%), Positives = 147/196 (75%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIE+ DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAG T N KERV+K
Sbjct: 378 FLCYIDLYVTIENQDIIHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGASTLNFKERVRK 437
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHASE+ Y NVH+LPKTSHLWILSG RS + F L KDQDQ+
Sbjct: 438 HIYSDSEGEMHWSTDVYHASEYTYGNVHLLPKTSHLWILSGSPYRSSIVPFSLHKDQDQM 497
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSH--FMY 534
++ SLS + + S L V++D V+H FS K GI +YS ++ I H H F+Y
Sbjct: 498 NVHSLSVERGSISDLSVTNDRVRHKLFSSDLSGKKRGGILDYSGPDRIISNGHGHWNFIY 557
Query: 535 PAIFHDTFNFLAKRRR 582
PAI H+ + LAKRRR
Sbjct: 558 PAILHENSDLLAKRRR 573
[67][TOP]
>UniRef100_A9XW74 DNA-directed RNA polymerase n=1 Tax=Euonymus americanus
RepID=A9XW74_9ROSI
Length = 1395
Score = 246 bits (628), Expect = 9e-64
Identities = 118/194 (60%), Positives = 145/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC ++LYVTIES DI++NV +P KSFLLVQNDQYV+SEQVIAEIRAGTYT N KERV+K
Sbjct: 383 FLCYMDLYVTIESEDILYNVTIPQKSFLLVQNDQYVESEQVIAEIRAGTYTLNFKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGE+HWSTDVYH EF YSNVH+LP+TSHLWIL G SCR + F + KDQDQ+
Sbjct: 443 HIYSDSEGEIHWSTDVYHTPEFAYSNVHLLPRTSHLWILKGSSCRYRVVSFSIHKDQDQV 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
H S+S R S ++D V+ FFS ++ I+ YS N+ ICT H + +YP
Sbjct: 503 HSLSVSAEGRYISSFSGNNDQVRSRFFSSDLSGKNQSKITEYSEHNRIICTGHCNLIYPP 562
Query: 541 IFHDTFNFLAKRRR 582
I H++++ LAKRRR
Sbjct: 563 ILHESYDLLAKRRR 576
[68][TOP]
>UniRef100_A6MM26 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Buxus
microphylla RepID=RPOC2_BUXMI
Length = 1391
Score = 246 bits (627), Expect = 1e-63
Identities = 122/194 (62%), Positives = 145/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +P KSFLLVQN+QYV+SEQVIAEIRA T TFN KERV+K
Sbjct: 383 FLCYIDLYVTIESQDIIHNVNIPQKSFLLVQNNQYVESEQVIAEIRAETSTFNFKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA E+ Y NVH+LPKTSHLW+LSG CRS + F L KDQDQ+
Sbjct: 443 HIYSDSEGEMHWSTDVYHAPEYTYGNVHLLPKTSHLWVLSGGPCRSRIVPFSLHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R S L ++D V+H FS + I +YS N+ IC H +F+YP
Sbjct: 503 NVHSLSAERRYISNLSATNDQVRHKLFSSDPSGKRGGSILDYSGPNRIICNGHLNFIYPT 562
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 563 ILHENSDLLAKRRR 576
[69][TOP]
>UniRef100_Q9BBS7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lotus japonicus
RepID=RPOC2_LOTJA
Length = 1332
Score = 245 bits (626), Expect = 2e-63
Identities = 123/194 (63%), Positives = 142/194 (73%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES+DI+HNVI+PPKSFLLVQNDQYVKSEQ+IAEIRAGTYT NLKE+V+K
Sbjct: 379 FLCYIDLYVTIESNDIMHNVIIPPKSFLLVQNDQYVKSEQIIAEIRAGTYTLNLKEKVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HI+SDSEGEMHWST++YH SEF YSNVHILPKTSHLWILSG S +SDT+ L KDQDQ+
Sbjct: 439 HIFSDSEGEMHWSTNIYHVSEFAYSNVHILPKTSHLWILSGNSHKSDTVSLSLLKDQDQM 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
SL KRNTS VS++ V+ +C DH HFM+P
Sbjct: 499 STHSLPTAKRNTSNFLVSNNQVR-------------------------LCPDHCHFMHPT 533
Query: 541 IFHDTFNFLAKRRR 582
I DT N LAK+RR
Sbjct: 534 ISPDTSNLLAKKRR 547
[70][TOP]
>UniRef100_A4QLI4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lobularia
maritima RepID=RPOC2_LOBMA
Length = 1371
Score = 245 bits (626), Expect = 2e-63
Identities = 122/194 (62%), Positives = 145/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEIR GTYTF+ KERV+K
Sbjct: 381 FLCYIDLSVIIESEDIIHSVTIPPKSFLLVQNDQYVESEQVIAEIREGTYTFHFKERVRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSDSEGEMHWSTDV HA EF YSNVH+LPKTSHLWILSG SC S I F + KDQDQ+
Sbjct: 441 YIYSDSEGEMHWSTDVSHAPEFTYSNVHLLPKTSHLWILSGSSCESSLIRFSIHKDQDQM 500
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ + S L V++D V FFS K++GI NYS N+ + T H +F+Y A
Sbjct: 501 NIPFFFVKSKAISSLSVNNDQVSQKFFSSDFSDKKKSGIPNYSELNEIVGTSHYNFIYSA 560
Query: 541 IFHDTFNFLAKRRR 582
IFH+ + LAKRRR
Sbjct: 561 IFHENSDLLAKRRR 574
[71][TOP]
>UniRef100_Q49L08 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Eucalyptus
globulus subsp. globulus RepID=RPOC2_EUCGG
Length = 1392
Score = 245 bits (626), Expect = 2e-63
Identities = 124/195 (63%), Positives = 148/195 (75%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+HNV +PPKSFLLVQN+QYV+SEQVIAEIRAGTYTFNLKERV+K
Sbjct: 383 FLCSIDLYVTIESEDILHNVTIPPKSFLLVQNNQYVESEQVIAEIRAGTYTFNLKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS + F L KDQDQ+
Sbjct: 443 HIYSESEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSSRVPFSLYKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFK-TFATKETGISNYSIFNQTICTDHSHFMYP 537
+L S +R S L V++D +++ S + KE I +YS N+ I H + YP
Sbjct: 503 NLRSTERERRYISSLSVNNDQMRYELCSSDFSGKIKEDRIPDYSELNRIISIVHCNLKYP 562
Query: 538 AIFHDTFNFLAKRRR 582
F + + LAKRRR
Sbjct: 563 TTFDENSDLLAKRRR 577
[72][TOP]
>UniRef100_A9XWB1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Reseda lutea
RepID=A9XWB1_9ROSI
Length = 1008
Score = 245 bits (625), Expect = 2e-63
Identities = 128/195 (65%), Positives = 146/195 (74%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC +L V IES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGTYT N KERV+K
Sbjct: 348 FLCYRDLSVIIESEDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTLNFKERVRK 407
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS I F L KDQD+I
Sbjct: 408 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSSIILFSLHKDQDEI 467
Query: 361 HLDSLSNGKRNTSPLFVSD-DHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYP 537
+ S S +R S L V+D D V+H FS + K+ GI YS N+ I T +S+ +Y
Sbjct: 468 SIPSPSVQRRYISNLSVNDNDQVRHKLFSSDFYEKKKCGIPAYSELNRIIGTGYSNAIYS 527
Query: 538 AIFHDTFNFLAKRRR 582
AI + + LAKRRR
Sbjct: 528 AIVQENSDLLAKRRR 542
[73][TOP]
>UniRef100_Q2L8Z5 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Gossypium
hirsutum RepID=RPOC2_GOSHI
Length = 1393
Score = 245 bits (625), Expect = 2e-63
Identities = 125/194 (64%), Positives = 143/194 (73%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC +LYV IES DIIH V +PPKSFLLVQNDQYV+SEQVIAEIRAGTYT NLKERV+K
Sbjct: 379 FLCYRDLYVIIESEDIIHKVAIPPKSFLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYH+ EF YSNVH+LPKTSHLWILSG S + + F L KDQDQI
Sbjct: 439 HIYSDSEGEMHWSTDVYHSPEFTYSNVHLLPKTSHLWILSGGSYKFSVVPFSLHKDQDQI 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ LS +R S V++D V+H FS KE I +YS N+ I T H F+Y A
Sbjct: 499 SIHYLSAERRYISRFSVNNDQVRHNLFSSDFSDKKEERIYDYSELNRIIGTGHCDFIYSA 558
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 559 ILHENADLLAKRRR 572
[74][TOP]
>UniRef100_Q09G56 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Platanus
occidentalis RepID=RPOC2_PLAOC
Length = 1387
Score = 244 bits (624), Expect = 3e-63
Identities = 122/194 (62%), Positives = 148/194 (76%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGT T N KERV+K
Sbjct: 383 FLCYIDLYVTIESQDIIHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWST+VYHA E+ YS+VH+LPKTSHLWILSG S RS + L KDQDQ+
Sbjct: 443 HIYSDSEGEMHWSTNVYHAPEYTYSHVHLLPKTSHLWILSGGSYRSSIVPLSLHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R S V++D V+H F+ + K I +YS ++ IC H +F+YP+
Sbjct: 503 NVHSLSVERRYISNFSVTNDQVRHKLFNSYPSSKKGERILDYSGTDRIICNGHCNFIYPS 562
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 563 ILHENSDLLAKRRR 576
[75][TOP]
>UniRef100_Q09FX1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Nandina
domestica RepID=RPOC2_NANDO
Length = 1377
Score = 244 bits (624), Expect = 3e-63
Identities = 122/194 (62%), Positives = 145/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIE DI HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGT T N KERV+K
Sbjct: 379 FLCYIDLYVTIEGQDIRHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKERVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWST VYHA E+ Y NVH+LPKTSHLWILSG RS + F L KDQDQ+
Sbjct: 439 HIYSDSEGEMHWSTAVYHAPEYTYGNVHLLPKTSHLWILSGGPYRSSIVSFSLHKDQDQM 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +++ S L V+++ V+H F S + K I +YS N+ IC H +F+YPA
Sbjct: 499 NVHSLSAEQKSISNLLVTNNQVRHKFLSSEPSGKKGERILDYSGPNRIICNGHCNFIYPA 558
Query: 541 IFHDTFNFLAKRRR 582
I H+ LAKRRR
Sbjct: 559 ILHENSYLLAKRRR 572
[76][TOP]
>UniRef100_A0ZZ25 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Gossypium
barbadense RepID=RPOC2_GOSBA
Length = 1391
Score = 244 bits (624), Expect = 3e-63
Identities = 124/194 (63%), Positives = 144/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC +LYV IES DIIH V +PPKSFLLVQNDQYV+SEQVIAEIRAGTYT NLKERV+K
Sbjct: 379 FLCYRDLYVIIESEDIIHKVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTLNLKERVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYH+ E+ YSNVH+LPKTSHLWILSG S + + F L KDQDQI
Sbjct: 439 HIYSDSEGEMHWSTDVYHSPEYTYSNVHLLPKTSHLWILSGGSYKFSVVPFSLHKDQDQI 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS +R S V++D V+H FS KE I +YS N+ I T H F+Y A
Sbjct: 499 NIHYLSAERRYISRFSVNNDQVRHNLFSSDFSDEKEERIYDYSELNRIIGTGHCDFIYSA 558
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 559 ILHENADLLAKRRR 572
[77][TOP]
>UniRef100_Q06H07 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Drimys
granadensis RepID=RPOC2_DRIGR
Length = 1381
Score = 244 bits (623), Expect = 4e-63
Identities = 124/194 (63%), Positives = 145/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRA T TFN KERV+K
Sbjct: 384 FLCYIDLYVTIESQDILHNVNIPPKSFLLVQNDQYVESEQVIAEIRARTSTFNFKERVRK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG RS + F L KDQDQ+
Sbjct: 444 HIYSDSEGEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGGPRRSSLVPFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R +S L V++D +H FS KE I +YS + I H +F+YPA
Sbjct: 504 NIHSLSVEQRESSDLSVTNDRARHKLFSSDPSGKKEGKILDYSGPARIISNGHWNFIYPA 563
Query: 541 IFHDTFNFLAKRRR 582
I H+ LAKRRR
Sbjct: 564 ILHENSYLLAKRRR 577
[78][TOP]
>UniRef100_A9XWA9 DNA-directed RNA polymerase n=1 Tax=Quercus nigra
RepID=A9XWA9_9ROSI
Length = 1396
Score = 243 bits (621), Expect = 6e-63
Identities = 121/194 (62%), Positives = 144/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F+C I LYVTIES DI+H V +PPKSFLLVQNDQYV+SEQVIAEIRAGTYTFN KERV+K
Sbjct: 383 FICYIYLYVTIESEDILHKVTIPPKSFLLVQNDQYVQSEQVIAEIRAGTYTFNFKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWSTDVYHA EF YSNVH+LPKTSHLWI+SG SCRS F L+KDQD+I
Sbjct: 443 HIYSNSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWIVSGGSCRSSVASFSLQKDQDKI 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ SLS R+ S L ++D V+ FFS F K+ S +++ H + +YP
Sbjct: 503 SVHSLSAEGRSISSLSGNNDQVRQKFFSSDIFXVKKKNKSEIPDYSELNRRGHCNLIYPV 562
Query: 541 IFHDTFNFLAKRRR 582
I ++ F LAKRRR
Sbjct: 563 ILYENFYLLAKRRR 576
[79][TOP]
>UniRef100_A9XW75 DNA-directed RNA polymerase n=1 Tax=Ficus sp. Moore 315
RepID=A9XW75_9ROSA
Length = 1391
Score = 243 bits (621), Expect = 6e-63
Identities = 127/201 (63%), Positives = 154/201 (76%), Gaps = 7/201 (3%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DIIHNV +PPKSF+LVQNDQYV+SEQVIAEIRAGTYTF+ KERV+K
Sbjct: 383 FLCSIDLYVTIESEDIIHNVTIPPKSFILVQNDQYVQSEQVIAEIRAGTYTFHFKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHAS+F YSNVH LPKTSHLWILSG S +S + F L KDQDQ
Sbjct: 443 HIYSDSEGEMHWSTDVYHASDFTYSNVHRLPKTSHLWILSGGSYKSSVVPFSLHKDQDQT 502
Query: 361 HLDSL---SNGKRNTSPLF--VSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSH 525
++ L + GK +S L V++D KH FF+ KE+ I +YS FN+ I TDHS+
Sbjct: 503 NIYFLFLSAKGKAISSFLVNTVNNDQGKHKFFTSGLSGKKESSIPDYSEFNRIIDTDHSN 562
Query: 526 FMYPAIFHDTFN--FLAKRRR 582
++P++ + + LAKRRR
Sbjct: 563 LIFPSLLYKDSDLVLLAKRRR 583
[80][TOP]
>UniRef100_A9XW68 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cupaniopsis
anacardioides RepID=A9XW68_CUPAN
Length = 1266
Score = 243 bits (621), Expect = 6e-63
Identities = 124/194 (63%), Positives = 144/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYV IES DI+H V +PPKSFLLVQNDQYV+SEQVIAEIRAGTYT N KERV+K
Sbjct: 348 FLCYIDLYVIIESEDIMHKVTIPPKSFLLVQNDQYVESEQVIAEIRAGTYTLNFKERVRK 407
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNV +LPKTSHLWILSG SC S + F L KDQDQ+
Sbjct: 408 HIYSDSEGEMHWSTDVYHAPEFTYSNVRLLPKTSHLWILSGGSCGSGVVCFSLYKDQDQL 467
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S +R S L V++D V+H S KE GIS+YS FN+ I H + ++ A
Sbjct: 468 SIHYHSVERRYISNLSVNNDQVRHQLVSSDFSDKKEDGISDYSGFNRIIGIGHCNLIHAA 527
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 528 ILHENSDLLAKRRR 541
[81][TOP]
>UniRef100_A9XW67 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crypteronia
paniculata RepID=A9XW67_9MYRT
Length = 1004
Score = 243 bits (621), Expect = 6e-63
Identities = 125/195 (64%), Positives = 151/195 (77%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F+C+I+L VTIES DI HNV +PPKSFLLVQN+QYV+SEQVIAEIRAGTYT N KERV+K
Sbjct: 352 FICSIDLSVTIESEDIRHNVTIPPKSFLLVQNNQYVESEQVIAEIRAGTYTLNFKERVRK 411
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHASE YSNVH+LPKTSHLWILSG SCRS + F L KDQDQI
Sbjct: 412 HIYSDSEGEMHWSTDVYHASELKYSNVHLLPKTSHLWILSGGSCRSSGVPFSLHKDQDQI 471
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFK-TFATKETGISNYSIFNQTICTDHSHFMYP 537
++ +LS +++ S L V++D +++ FS + KE I +YS N+ T + +YP
Sbjct: 472 NIRALSVERKSISNLSVNNDPMRYKLFSSSFSGKKKEDEIPDYSELNR---TGRCNLIYP 528
Query: 538 AIFHDTFNFLAKRRR 582
AIFH +FLAKRRR
Sbjct: 529 AIFHKNSDFLAKRRR 543
[82][TOP]
>UniRef100_A9XWA5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Picramnia polyantha
RepID=A9XWA5_9ROSI
Length = 1275
Score = 243 bits (620), Expect = 8e-63
Identities = 122/194 (62%), Positives = 144/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC L VTIES I+HNV +PPKSFLLV+NDQYV+SEQVIAEIRAGTYTFN KE+V+K
Sbjct: 339 FLCYTNLDVTIESDHILHNVTIPPKSFLLVKNDQYVESEQVIAEIRAGTYTFNFKEQVRK 398
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDV H +EF YSNVH+LPKTSHLWIL G SCRS + F L KDQDQ
Sbjct: 399 HIYSDSEGEMHWSTDVSHTTEFTYSNVHLLPKTSHLWILLGGSCRSSGVPFSLHKDQDQT 458
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ S S +R S L V++D V++ FFS KE GI +YS NQ +CT + PA
Sbjct: 459 NIHSPSGEQRYISNLSVNNDRVRYKFFSSDFLDKKEGGILDYSELNQIVCTGRCNLTSPA 518
Query: 541 IFHDTFNFLAKRRR 582
I ++ + LAKRRR
Sbjct: 519 ILYENSDLLAKRRR 532
[83][TOP]
>UniRef100_A9XW47 DNA-directed RNA polymerase (Fragment) n=1 Tax=Atuna racemosa
RepID=A9XW47_9ROSI
Length = 1279
Score = 243 bits (620), Expect = 8e-63
Identities = 123/194 (63%), Positives = 146/194 (75%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DIIHNV +PPKS LLVQNDQYV+SEQVIAEIR+GTYT + KERV+K
Sbjct: 350 FLCSIDLYVTIESQDIIHNVTIPPKSLLLVQNDQYVESEQVIAEIRSGTYTLSFKERVRK 409
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDV HA EF+YSNVH+LPKTSHLWILSG S +S I F + KDQDQ+
Sbjct: 410 HIYSDSEGEMHWSTDVSHAPEFIYSNVHLLPKTSHLWILSGGSSKSSIIPFSIHKDQDQM 469
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R S V++DHVK FFS KE I +Y N+ ICT + + + A
Sbjct: 470 NVHSLSVEQRYISSPSVNNDHVKQKFFSSDFSGKKEGRIPDYLELNRVICTSYCNLISSA 529
Query: 541 IFHDTFNFLAKRRR 582
I + LAKRRR
Sbjct: 530 IIRGNSDLLAKRRR 543
[84][TOP]
>UniRef100_P56764 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Arabidopsis
thaliana RepID=RPOC2_ARATH
Length = 1376
Score = 243 bits (620), Expect = 8e-63
Identities = 122/194 (62%), Positives = 146/194 (75%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEIR GTYTF+ KERV+K
Sbjct: 381 FLCYIDLSVIIESEDIIHSVTIPPKSFLLVQNDQYVESEQVIAEIREGTYTFHFKERVRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSDSEGEMHWSTDV HA EF YSNVH+LPKTSHLWILSG SC S I F + KDQDQ+
Sbjct: 441 YIYSDSEGEMHWSTDVSHAPEFTYSNVHLLPKTSHLWILSGGSCGSSLIRFSIHKDQDQM 500
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS +++ S L V++D V FFS K+ GI +YS N + T H + +Y A
Sbjct: 501 NIPFLSAERKSISSLSVNNDQVSQKFFSSDFADPKKLGIYDYSELNGNLGTSHYNLIYSA 560
Query: 541 IFHDTFNFLAKRRR 582
IFH+ + LAKRRR
Sbjct: 561 IFHENSDLLAKRRR 574
[85][TOP]
>UniRef100_A9XWC1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Swietenia
macrophylla RepID=A9XWC1_9ROSI
Length = 1291
Score = 243 bits (619), Expect = 1e-62
Identities = 127/201 (63%), Positives = 149/201 (74%), Gaps = 7/201 (3%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYV IES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAG YT N KERV+K
Sbjct: 352 FLCYIDLYVIIESEDIMHNVSIPPKSFLLVQNDQYVESEQVIAEIRAGAYTLNFKERVRK 411
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SC S + F L KDQDQ+
Sbjct: 412 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCGSSVVSFSLHKDQDQM 471
Query: 361 HLDSLSNGKRNTSPLFVSDDH----VKHPFFSFKTFATKETG---ISNYSIFNQTICTDH 519
++ SLS +R+ S L +S ++ +H FS A KE G I +YS FN+ I T H
Sbjct: 472 NIHSLSVERRDISSLSLSVNNDQARARHKLFSSYFSAKKEGGIFEIPDYSGFNRIIGTGH 531
Query: 520 SHFMYPAIFHDTFNFLAKRRR 582
+ ++P I H + LAKRRR
Sbjct: 532 CNLIHPPIRHANSDLLAKRRR 552
[86][TOP]
>UniRef100_A9XW50 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bixa orellana
RepID=A9XW50_BIXOR
Length = 1266
Score = 242 bits (618), Expect = 1e-62
Identities = 123/197 (62%), Positives = 148/197 (75%), Gaps = 3/197 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC ++LYV IES D+IH V +P KSFLLVQN+QYV+SEQVIAEIRAGTYTFN KERV+K
Sbjct: 349 FLCYMDLYVIIESEDVIHKVTIPSKSFLLVQNNQYVESEQVIAEIRAGTYTFNFKERVRK 408
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYH+ EF YSNVH+LPKTSHLWILSG C+ + F + KDQDQI
Sbjct: 409 HIYSDSEGEMHWSTDVYHSPEFTYSNVHLLPKTSHLWILSGSLCKFSLVPFSIHKDQDQI 468
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFS--FKTFATKETG-ISNYSIFNQTICTDHSHFM 531
++ SLS +R S L V++D +H FS F K+ G IS+YS FN+ I T H + +
Sbjct: 469 NIHSLSAERRYISSLSVNNDQARHKLFSSGFSDKNDKKKGRISDYSEFNRIINTGHCNSL 528
Query: 532 YPAIFHDTFNFLAKRRR 582
Y AI H+ + L KRRR
Sbjct: 529 YSAIPHENSDLLGKRRR 545
[87][TOP]
>UniRef100_Q09MI8 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Citrus sinensis
RepID=RPOC2_CITSI
Length = 1403
Score = 242 bits (618), Expect = 1e-62
Identities = 126/200 (63%), Positives = 150/200 (75%), Gaps = 6/200 (3%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+L V IE DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAG YT N KERV+K
Sbjct: 381 FLCSIDLDVIIEGEDIMHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGAYTLNFKERVRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG S RS + F L KDQDQ+
Sbjct: 441 HIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSRRSSVVSFSLHKDQDQM 500
Query: 361 HLDSLSNGKRNTS--PLFVSDDHVKHPFFSFKTFATKETG----ISNYSIFNQTICTDHS 522
++ SLS +R S L V++D H FFS F+ K+ G +S+YS FN+ I T H
Sbjct: 501 NIHSLSVERREISSLSLSVNNDQTGHKFFS-SDFSAKKKGRILEMSDYSGFNRIISTGHC 559
Query: 523 HFMYPAIFHDTFNFLAKRRR 582
+ ++PAI H + LAKR+R
Sbjct: 560 NLIHPAILHANSDLLAKRQR 579
[88][TOP]
>UniRef100_A4QKS1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Crucihimalaya
wallichii RepID=RPOC2_CRUWA
Length = 1379
Score = 241 bits (616), Expect = 2e-62
Identities = 121/194 (62%), Positives = 146/194 (75%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IES DIIH+V +PPKSF+LVQNDQYV+SEQVIAEIR GTYTF+ KERV+K
Sbjct: 381 FLCYIDLSVIIESEDIIHSVTIPPKSFILVQNDQYVESEQVIAEIREGTYTFHFKERVRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSDSEGEMHWSTDV HA EF YSNVH+LPKTSHLWILSG SC S I F + KDQDQ+
Sbjct: 441 YIYSDSEGEMHWSTDVSHAPEFTYSNVHLLPKTSHLWILSGSSCGSSLILFSIHKDQDQM 500
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS +++ S L V++D V F S K++GI +YS N + T H +F+Y A
Sbjct: 501 NIPFLSVERKSISSLSVNNDQVSQKFLSSDFADQKKSGIPDYSELNGNLGTSHYNFIYSA 560
Query: 541 IFHDTFNFLAKRRR 582
IFH + LAKRRR
Sbjct: 561 IFHKNSDLLAKRRR 574
[89][TOP]
>UniRef100_A4QJA5 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Aethionema
cordifolium RepID=RPOC2_AETCO
Length = 1385
Score = 241 bits (616), Expect = 2e-62
Identities = 120/194 (61%), Positives = 146/194 (75%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEIR GTYTF KERV+K
Sbjct: 381 FLCYIDLSVIIESEDIIHSVTIPPKSFLLVQNDQYVESEQVIAEIREGTYTFRFKERVRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSDSEGEMHWSTDVYHA EF YSNVH++PKTSHLWILSG SC + I F + KDQDQ+
Sbjct: 441 YIYSDSEGEMHWSTDVYHAPEFTYSNVHLVPKTSHLWILSGGSCGASLILFSIHKDQDQM 500
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS +++ L V++D V FFS K++GI +YS N + T H + +Y A
Sbjct: 501 NIPFLSVKRKSICSLSVNNDQVSQKFFSSDFSDKKKSGIPDYSELNGIVGTSHYNLIYSA 560
Query: 541 IFHDTFNFLAKRRR 582
IFH+ + LAKRRR
Sbjct: 561 IFHENSDLLAKRRR 574
[90][TOP]
>UniRef100_A9XW76 DNA-directed RNA polymerase (Fragment) n=1 Tax=Floerkea
proserpinacoides RepID=A9XW76_FLOPR
Length = 1257
Score = 241 bits (615), Expect = 3e-62
Identities = 125/194 (64%), Positives = 145/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IE+ DI+HNVI+PPKSFLLVQNDQYV+SEQVIAEIRAGTYTFN KE+VQK
Sbjct: 348 FLCYIDLSVLIENEDILHNVIIPPKSFLLVQNDQYVESEQVIAEIRAGTYTFNFKEKVQK 407
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWST VYHA +F YSNVH+LPKTSHLWILSG S RS + F L KDQDQ+
Sbjct: 408 HIYSDSEGEMHWSTYVYHAPQFTYSNVHLLPKTSHLWILSGSSYRSRLMPFSLHKDQDQM 467
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS +R S L V + V++ FFS K I YS NQ ICT HS+ +Y
Sbjct: 468 NIHSLSVEQRYISRLSV--NQVRNKFFSSDFSDKKNYRIPYYSKVNQIICTSHSNLIYSV 525
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAK RR
Sbjct: 526 ILHENSDLLAKSRR 539
[91][TOP]
>UniRef100_Q2VEI6 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Solanum
tuberosum RepID=RPOC2_SOLTU
Length = 1392
Score = 241 bits (614), Expect = 4e-62
Identities = 117/194 (60%), Positives = 142/194 (73%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+HNV +PPKS LLVQNDQYV+SEQVIAEIRAG T N KE+V+K
Sbjct: 383 FLCSIDLYVTIESEDILHNVNIPPKSLLLVQNDQYVESEQVIAEIRAGISTLNFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GEMHWSTDVYHA EF Y NVH+LPKTSHLWIL G CRS ++ + KDQDQ+
Sbjct: 443 HIYSDSDGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILLGGPCRSSLVYLSIHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ SLS +R TS L V++D + FS + KE I +YS N+ ICT + +Y
Sbjct: 503 NAHSLSGKRRYTSNLSVTNDQARQKLFSSDFYGQKEDRIPDYSDLNRIICTGQYNLVYSP 562
Query: 541 IFHDTFNFLAKRRR 582
I H + L+KRRR
Sbjct: 563 ILHGNSDLLSKRRR 576
[92][TOP]
>UniRef100_A4QKI2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Capsella
bursa-pastoris RepID=RPOC2_CAPBU
Length = 1379
Score = 241 bits (614), Expect = 4e-62
Identities = 122/194 (62%), Positives = 145/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEIR GTYTF+ KERV+K
Sbjct: 381 FLCYIDLSVIIESEDIIHSVTIPPKSFLLVQNDQYVESEQVIAEIREGTYTFHFKERVRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSDSEGEMHWSTDV HA EF YSNVH+LPKTSHLWILSG SC S I F + KDQDQ+
Sbjct: 441 YIYSDSEGEMHWSTDVSHAPEFTYSNVHLLPKTSHLWILSGGSCGSSLILFSIHKDQDQM 500
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS +++ S L V++D FFS K+ GIS YS N + T H +F+Y A
Sbjct: 501 NIPFLSAERKSISSLSVNNDQTSQKFFSSDFADKKKLGISYYSELNGNLGTSHYNFIYSA 560
Query: 541 IFHDTFNFLAKRRR 582
IF + + LAKRRR
Sbjct: 561 IFQENSDLLAKRRR 574
[93][TOP]
>UniRef100_Q9THV5 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Sinapis alba
RepID=RPOC2_SINAL
Length = 1384
Score = 240 bits (613), Expect = 5e-62
Identities = 123/194 (63%), Positives = 146/194 (75%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEIR GTYTF KERV+K
Sbjct: 385 FLCYIDLSVIIESEDIIHSVTIPPKSFLLVQNDQYVESEQVIAEIREGTYTFQFKERVRK 444
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSDSEG MHWSTDV HA EF YSNVH+LPKTSHLWILSG SC S I F + KDQDQ+
Sbjct: 445 YIYSDSEGGMHWSTDVSHAPEFTYSNVHLLPKTSHLWILSGGSCGSSLILFSIHKDQDQM 504
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS +++ S L V++D V FFS F+ K+ I NYS N + T H +F+Y A
Sbjct: 505 NIPFLSVERKSISSLSVNNDQVSQKFFS-SDFSDKKILIPNYSELNGIVGTSHYNFIYSA 563
Query: 541 IFHDTFNFLAKRRR 582
IFH+ + LAKRRR
Sbjct: 564 IFHENSDLLAKRRR 577
[94][TOP]
>UniRef100_A4QK95 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Barbarea verna
RepID=RPOC2_BARVE
Length = 1379
Score = 240 bits (613), Expect = 5e-62
Identities = 121/194 (62%), Positives = 147/194 (75%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEIR GT+TF+ KERV+K
Sbjct: 381 FLCYIDLSVIIESEDIIHSVTIPPKSFLLVQNDQYVESEQVIAEIREGTHTFHFKERVRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSDSEGEMHWSTDV HA EF YSNVH+LPKTSHLWILSG SC S I F + KDQDQ+
Sbjct: 441 YIYSDSEGEMHWSTDVSHAPEFTYSNVHLLPKTSHLWILSGGSCGSSLILFSIHKDQDQM 500
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS +++ S L V++D V F S K++GI +YS N + T H +F+Y A
Sbjct: 501 NIPFLSVERKSISSLSVNNDQVSQNFLSSDFADKKKSGIPHYSELNGNLGTSHYNFIYSA 560
Query: 541 IFHDTFNFLAKRRR 582
IFH+ + LAKRRR
Sbjct: 561 IFHENSDLLAKRRR 574
[95][TOP]
>UniRef100_Q7YJY0 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Calycanthus
floridus var. glaucus RepID=RPOC2_CALFG
Length = 1377
Score = 240 bits (612), Expect = 7e-62
Identities = 123/196 (62%), Positives = 147/196 (75%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLK--ERV 174
FLC +LYVTIESHDI+HNV +P KSFLLVQNDQYV+SEQVIAEIRAGT TFNLK E+V
Sbjct: 382 FLCYTDLYVTIESHDILHNVNIPQKSFLLVQNDQYVESEQVIAEIRAGTSTFNLKVKEKV 441
Query: 175 QKHIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQD 354
+KHIYSDSEGEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG CRS + F L KDQD
Sbjct: 442 RKHIYSDSEGEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGGLCRSSIVPFSLHKDQD 501
Query: 355 QIHLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMY 534
Q+++ SLS +R S L V++ V+H FS + K +YS ++ I H +F+Y
Sbjct: 502 QMNVHSLSVEQRYISDLSVTNVRVRHKLFSSDSSGKKGGRAPDYSGPDRIISNGHWNFIY 561
Query: 535 PAIFHDTFNFLAKRRR 582
PAI H+ + LAKRRR
Sbjct: 562 PAILHENSDLLAKRRR 577
[96][TOP]
>UniRef100_A9XWC8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Viviania marifolia
RepID=A9XWC8_9ROSI
Length = 1281
Score = 239 bits (611), Expect = 9e-62
Identities = 122/198 (61%), Positives = 146/198 (73%), Gaps = 4/198 (2%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F+C I+LYVTIES DIIHNV +PPKS LL+QNDQYV+SEQVIAEIRAG TFN KE+VQK
Sbjct: 352 FICYIDLYVTIESEDIIHNVTIPPKSVLLIQNDQYVESEQVIAEIRAGASTFNFKEKVQK 411
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF SNVH+LPKTSHLWILSG SC+S + F L K+QDQ+
Sbjct: 412 HIYSDSEGEMHWSTDVYHAPEFPDSNVHLLPKTSHLWILSGDSCKSSLVPFSLHKNQDQM 471
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGIS----NYSIFNQTICTDHSHF 528
SLS +R+ S L V++D V H FF F KE+ I +YS+ Q + +S+
Sbjct: 472 STHSLSVDRRSISSLSVNNDQVSHKFFWSDLFGKKESRIRISNYHYSVQKQIVWGGYSNR 531
Query: 529 MYPAIFHDTFNFLAKRRR 582
+YP I + F L+KRRR
Sbjct: 532 IYPVILNKYFVLLSKRRR 549
[97][TOP]
>UniRef100_Q2MIB0 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Solanum
lycopersicum RepID=RPOC2_SOLLC
Length = 1392
Score = 239 bits (611), Expect = 9e-62
Identities = 117/194 (60%), Positives = 141/194 (72%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+HNV +PPKS LLVQNDQYV+SEQVIAEIRAG T N KE+V+K
Sbjct: 383 FLCSIDLYVTIESEDILHNVNIPPKSLLLVQNDQYVESEQVIAEIRAGISTLNFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GEMHWSTDVYHA EF Y NVH+LPKTSHLWIL G CRS ++ + KDQDQ+
Sbjct: 443 HIYSDSDGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILLGGPCRSSLVYLSIHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ SLS +R TS L V++D + FS + KE I +YS N+ ICT + +Y
Sbjct: 503 NAHSLSGKRRYTSNLSVTNDQARQKLFSSDFYGQKEDRIPDYSDLNRIICTGQYNLVYSP 562
Query: 541 IFHDTFNFLAKRRR 582
I H L+KRRR
Sbjct: 563 ILHGNSALLSKRRR 576
[98][TOP]
>UniRef100_Q2MIJ7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Solanum
bulbocastanum RepID=RPOC2_SOLBU
Length = 1392
Score = 239 bits (611), Expect = 9e-62
Identities = 117/194 (60%), Positives = 141/194 (72%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+HNV +PPKS LLVQNDQYV+SEQVIAEIRAG T N KE+V+K
Sbjct: 383 FLCSIDLYVTIESEDILHNVNIPPKSLLLVQNDQYVESEQVIAEIRAGISTLNFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GEMHWSTDVYHA EF Y NVH+LPKTSHLWIL G CRS ++ + KDQDQ+
Sbjct: 443 HIYSDSDGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILLGGPCRSSLVYLSIHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ SLS R TS L V++D + FS + KE I +YS N+ ICT + +Y
Sbjct: 503 NAHSLSGKPRYTSNLSVTNDQARQKLFSSDFYGQKEDRIPDYSDLNRIICTGQYNLVYSP 562
Query: 541 IFHDTFNFLAKRRR 582
I H + L+KRRR
Sbjct: 563 ILHGNSDLLSKRRR 576
[99][TOP]
>UniRef100_A9XW51 DNA-directed RNA polymerase (Fragment) n=1 Tax=Brexia
madagascariensis RepID=A9XW51_BREMA
Length = 1268
Score = 239 bits (610), Expect = 1e-61
Identities = 114/194 (58%), Positives = 144/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC ++LYVTIES DI++ V +P KS +LVQNDQYV+SEQVIAEIRAGTYT N KERV+K
Sbjct: 348 FLCYMDLYVTIESEDILYKVTIPQKSLILVQNDQYVESEQVIAEIRAGTYTLNFKERVRK 407
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGE+HWSTDVYH +F YSNVH+LP+TSHLWIL G SCR ++F + KDQDQ+
Sbjct: 408 HIYSDSEGEIHWSTDVYHTPKFAYSNVHLLPRTSHLWILKGSSCRYPVVYFSIHKDQDQV 467
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
H S S R S ++D V++ FFS ++ I++YS N+ ICT H + +YP
Sbjct: 468 HSLSGSGKGRYISSFSGNNDQVRYRFFSSDLSGKNQSKITDYSEHNRIICTGHCNLIYPP 527
Query: 541 IFHDTFNFLAKRRR 582
I H++ + LAKRRR
Sbjct: 528 ILHESSDLLAKRRR 541
[100][TOP]
>UniRef100_A4QJI9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Aethionema
grandiflorum RepID=RPOC2_AETGR
Length = 1383
Score = 239 bits (610), Expect = 1e-61
Identities = 119/194 (61%), Positives = 144/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEIR GTYTF KERV+K
Sbjct: 381 FLCYIDLSVIIESEDIIHSVTIPPKSFLLVQNDQYVESEQVIAEIREGTYTFRFKERVRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSDSEGEMHWSTDVYHA EF YSNVH++PKTSHLWILSG SC S I F + KDQDQ+
Sbjct: 441 YIYSDSEGEMHWSTDVYHAPEFTYSNVHLVPKTSHLWILSGGSCGSSLISFSIHKDQDQM 500
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS +++ L V++D V F S K++GI +YS N + H + +Y A
Sbjct: 501 NIPFLSVKRKSICSLSVNNDQVSQKFLSSDFSDKKKSGIPDYSELNGIVGNSHYNLIYSA 560
Query: 541 IFHDTFNFLAKRRR 582
IFH+ + LAKRRR
Sbjct: 561 IFHENSDLLAKRRR 574
[101][TOP]
>UniRef100_Q68S16 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Panax ginseng
RepID=RPOC2_PANGI
Length = 1387
Score = 238 bits (608), Expect = 2e-61
Identities = 121/194 (62%), Positives = 143/194 (73%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRAGT T N KE+V+K
Sbjct: 383 FLCSIDLYVTIESEDIIHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHW+TDVYHA F Y NVH+LPKTSHLWIL G+ CRSD + + KDQDQ+
Sbjct: 443 HIYSDSEGEMHWNTDVYHAPAFTYGNVHLLPKTSHLWILLGEPCRSDLVALSIHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ SLS +R S L V++D +H FFS KE I++YS N+ H + Y A
Sbjct: 503 NAHSLSVKRRYISNLSVTNDQARHKFFSSDFSGKKEDRITDYSELNR---IGHCNLPYLA 559
Query: 541 IFHDTFNFLAKRRR 582
I H + LAKRRR
Sbjct: 560 ILHANSDLLAKRRR 573
[102][TOP]
>UniRef100_A4QL96 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lepidium
virginicum RepID=RPOC2_LEPVR
Length = 1373
Score = 238 bits (608), Expect = 2e-61
Identities = 119/194 (61%), Positives = 145/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC ++L V IES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEIR GTYTF+ KERV+K
Sbjct: 381 FLCYMDLSVIIESEDIIHSVTIPPKSFLLVQNDQYVESEQVIAEIREGTYTFHFKERVRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSDSEGEMHWSTDV HA EF YSNVH+LPKTSHLW+LSG SC S I F + KDQDQ+
Sbjct: 441 YIYSDSEGEMHWSTDVSHAPEFTYSNVHLLPKTSHLWVLSGNSCGSSLILFSIHKDQDQM 500
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS +++ S L V++D V F S K++G YS N + T H +F+Y A
Sbjct: 501 NIPFLSVERKSISSLSVNNDQVSQKFLSSDFADKKKSGTPYYSELNGILGTSHYNFIYSA 560
Query: 541 IFHDTFNFLAKRRR 582
IFH+ + LAKRRR
Sbjct: 561 IFHENSDLLAKRRR 574
[103][TOP]
>UniRef100_A0A325 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Coffea arabica
RepID=RPOC2_COFAR
Length = 1391
Score = 238 bits (608), Expect = 2e-61
Identities = 115/194 (59%), Positives = 147/194 (75%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTI+S +I+HNV +PPKSFLLVQNDQYV++EQVIAEIRAGT T + KE+V+K
Sbjct: 383 FLCFIDLYVTIKSENILHNVNIPPKSFLLVQNDQYVEAEQVIAEIRAGTSTLSFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GE+HWSTDVYHA +F Y NVH+LPKTSHLWIL G CRS + L KDQDQ+
Sbjct: 443 HIYSDSDGEIHWSTDVYHAPQFTYGNVHLLPKTSHLWILLGGPCRSSLVSLSLHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ SLS +R T L V++D V++ FFS + K+ I +Y N+ ICT + + +YPA
Sbjct: 503 NTHSLSVKRRYTYKLSVTNDRVRYKFFSSDFYGKKKNRIPDYLDLNRIICTGYCNRIYPA 562
Query: 541 IFHDTFNFLAKRRR 582
I H+ + L+KRRR
Sbjct: 563 ILHENSDLLSKRRR 576
[104][TOP]
>UniRef100_Q8S8Y1 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Atropa
belladonna RepID=RPOC2_ATRBE
Length = 1389
Score = 238 bits (607), Expect = 3e-61
Identities = 116/194 (59%), Positives = 142/194 (73%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+HNV +PPKS LLVQNDQYV+SEQVIAEIRAG T N KE+V+K
Sbjct: 383 FLCSIDLYVTIESEDILHNVNIPPKSLLLVQNDQYVESEQVIAEIRAGISTLNFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GEMHWSTDVYHA EF Y NVH+LPKTSHLWIL G C+S ++ + KDQDQ+
Sbjct: 443 HIYSDSDGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILLGGPCKSSLVYLSIHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ SLS +R TS L V++D + FS KE I +YS N+ ICT + +Y
Sbjct: 503 NAHSLSGKQRYTSNLSVTNDQARQKLFSSGFSGKKEDRIPDYSDLNRIICTGQYNLVYSP 562
Query: 541 IFHDTFNFLAKRRR 582
I H+ + L+KRRR
Sbjct: 563 ILHENSDLLSKRRR 576
[105][TOP]
>UniRef100_A4QJS3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Olimarabidopsis
pumila RepID=RPOC2_OLIPU
Length = 1379
Score = 237 bits (605), Expect = 4e-61
Identities = 120/194 (61%), Positives = 144/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEIR GTYTF+ KERV+K
Sbjct: 381 FLCYIDLSVIIESEDIIHSVTIPPKSFLLVQNDQYVESEQVIAEIREGTYTFHFKERVRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSDSEGEMHWSTDV HA EF YSNVH+LPKTSHLWILSG SC S I F + KDQDQ+
Sbjct: 441 YIYSDSEGEMHWSTDVSHAPEFTYSNVHLLPKTSHLWILSGGSCGSSLIFFSIHKDQDQM 500
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS +++ S L V++D V S + GI +YS F + T H +F+Y A
Sbjct: 501 NIPFLSVERKSISSLSVNNDQVSQKVLSSDFADQTKFGIPDYSEFKGNLGTSHYNFIYSA 560
Query: 541 IFHDTFNFLAKRRR 582
IFH+ + LAKRRR
Sbjct: 561 IFHENSDLLAKRRR 574
[106][TOP]
>UniRef100_Q3C1G9 DNA-directed RNA polymerase subunit beta'' n=3 Tax=Nicotiana
RepID=RPOC2_NICSY
Length = 1392
Score = 237 bits (605), Expect = 4e-61
Identities = 115/194 (59%), Positives = 141/194 (72%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+HNV +PPKS LLVQNDQYV+SEQVIAEIRAG T N KE+V+K
Sbjct: 383 FLCSIDLYVTIESEDILHNVNIPPKSLLLVQNDQYVESEQVIAEIRAGISTLNFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GEMHWSTDVYHA EF Y NVH+LPKTSHLWIL G+ CRS ++ + KDQDQ+
Sbjct: 443 HIYSDSDGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILLGRPCRSSLVYLSIHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ LS +R TS L V++D + FS KE I +YS N+ IC + +Y
Sbjct: 503 NAHFLSGKRRYTSNLSVTNDQARQKLFSSDFSGKKEDRIPDYSDLNRIICAGQYNLVYSP 562
Query: 541 IFHDTFNFLAKRRR 582
I H+ + L+KRRR
Sbjct: 563 ILHENSDLLSKRRR 576
[107][TOP]
>UniRef100_A9XW48 DNA-directed RNA polymerase (Fragment) n=1 Tax=Batis maritima
RepID=A9XW48_BATMA
Length = 1256
Score = 237 bits (604), Expect = 6e-61
Identities = 122/194 (62%), Positives = 143/194 (73%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+ +L V +ES DIIHNV +PPKSFLLVQN+QYV+SEQVIAEIRAGTYTFNLKE+V+K
Sbjct: 350 FLCDTDLSVIVESEDIIHNVTIPPKSFLLVQNNQYVESEQVIAEIRAGTYTFNLKEKVRK 409
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWS DVYHA EF YSNVH+LPKTSHLWILSG SC S I F L KDQDQI
Sbjct: 410 HIYSDSEGEMHWSADVYHAPEFTYSNVHLLPKTSHLWILSGGSCGSSLISFPLHKDQDQI 469
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ S S V++D K FS + K+ IS+YS F+Q I T HS+ +Y
Sbjct: 470 NILSPS----------VNNDQAKDKLFSSRFAEKKKCKISDYSKFHQIIGTGHSNLIYSP 519
Query: 541 IFHDTFNFLAKRRR 582
I + + LAKRRR
Sbjct: 520 ILQENLDLLAKRRR 533
[108][TOP]
>UniRef100_A4QLS3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Nasturtium
officinale RepID=RPOC2_NASOF
Length = 1379
Score = 237 bits (604), Expect = 6e-61
Identities = 120/194 (61%), Positives = 145/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEIR GTYTF+ KERV+K
Sbjct: 381 FLCYIDLSVIIESEDIIHSVTIPPKSFLLVQNDQYVESEQVIAEIREGTYTFHFKERVRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSDSEGEMHWSTDV HA EF YSNVH+LPKTSHLWILSG SC S I F + KDQDQ+
Sbjct: 441 YIYSDSEGEMHWSTDVSHAPEFTYSNVHLLPKTSHLWILSGGSCGSSLILFSIHKDQDQM 500
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS +++ S V++D V F S K++ I +YS N + T H +F+Y A
Sbjct: 501 NIPFLSVERKSISSFSVNNDQVSKKFVSSDFDDKKKSEIPHYSDLNGNLGTSHYNFIYSA 560
Query: 541 IFHDTFNFLAKRRR 582
IFH+ + LAKRRR
Sbjct: 561 IFHENSDLLAKRRR 574
[109][TOP]
>UniRef100_A7Y3B4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ipomoea purpurea
RepID=RPOC2_IPOPU
Length = 1401
Score = 236 bits (603), Expect = 7e-61
Identities = 121/201 (60%), Positives = 146/201 (72%), Gaps = 7/201 (3%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGT T NLKE+V+K
Sbjct: 383 FLCSIDLYVTIESEDILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNLKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GEMHWSTDVYHA EF Y NVH+L KTSHLWIL G+ CRS + + +DQDQ
Sbjct: 443 HIYSDSDGEMHWSTDVYHAPEFTYGNVHLLSKTSHLWILLGEPCRSSLVSLSIHRDQDQK 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
SL +R+ S L ++D + FS KE I++YS N+ ICTDHS+ +YPA
Sbjct: 503 SAHSLFVKRRSISNLSETNDRARQKIFSAHFSGQKEDRIADYSDLNRIICTDHSNLVYPA 562
Query: 541 IF-----HDTF--NFLAKRRR 582
I + F N L+KRRR
Sbjct: 563 ILPILAENSDFLSNLLSKRRR 583
[110][TOP]
>UniRef100_A4QL09 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Draba nemorosa
RepID=RPOC2_DRANE
Length = 1381
Score = 236 bits (602), Expect = 1e-60
Identities = 119/194 (61%), Positives = 144/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L V IES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIR G TF+ KERV+K
Sbjct: 381 FLCYIDLSVIIESDDIIHNVTIPPKSFLLVQNDQYVESEQVIAEIREGASTFHFKERVRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYS SEGEMHWSTDV HA EF YSNVH+LPKTSHLWILSG SC S I F + KDQDQ+
Sbjct: 441 YIYSGSEGEMHWSTDVSHAPEFTYSNVHLLPKTSHLWILSGGSCGSSLIRFSIHKDQDQM 500
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS ++ S L V++D V F S + K++GI++YS N + T H +F+Y
Sbjct: 501 NIPFLSAQIKSISSLSVNNDQVSQKFCSSDFYDKKKSGITDYSELNGIVGTSHYNFIYST 560
Query: 541 IFHDTFNFLAKRRR 582
IFH+ + LAKRRR
Sbjct: 561 IFHENSDLLAKRRR 574
[111][TOP]
>UniRef100_Q4FFY8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nuphar advena
RepID=Q4FFY8_NUPAD
Length = 1390
Score = 236 bits (601), Expect = 1e-60
Identities = 118/195 (60%), Positives = 144/195 (73%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC ++LYVTIES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEIRAGT TF+ KERV+K
Sbjct: 382 FLCYVDLYVTIESQDIIHSVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFHFKERVRK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA E+ + NVH LP+TSHLWILSG C+S + F L KDQDQ+
Sbjct: 442 HIYSDSEGEMHWSTDVYHAPEYTHGNVHFLPQTSHLWILSGGPCKSSLVPFSLHKDQDQM 501
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSI-FNQTICTDHSHFMYP 537
++ SLS +R S V+++ V+H F A + IS+Y+ F + I H F+YP
Sbjct: 502 NVQSLSVQERYISDFSVNNNRVRHKLFGSDPLAKRGQRISDYAAGFERVISNGHWDFIYP 561
Query: 538 AIFHDTFNFLAKRRR 582
AI + LAKRRR
Sbjct: 562 AILRENSYLLAKRRR 576
[112][TOP]
>UniRef100_Q33C48 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Nicotiana
tomentosiformis RepID=RPOC2_NICTO
Length = 1392
Score = 236 bits (601), Expect = 1e-60
Identities = 115/194 (59%), Positives = 140/194 (72%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+HNV +PPKS LLVQNDQYV+SEQVIAEIRAG T N KE+V+K
Sbjct: 383 FLCSIDLYVTIESEDILHNVNIPPKSLLLVQNDQYVESEQVIAEIRAGISTLNFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GEMHWSTDVYHA EF Y NVH+LPKTSHLWIL G CRS ++ + KDQDQ+
Sbjct: 443 HIYSDSDGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILLGGPCRSSLVYLSIHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ LS +R TS L V++D + FS KE I +YS N+ IC + +Y
Sbjct: 503 NAHFLSGKRRYTSNLSVTNDQARQKLFSSDFSVKKEDRIPDYSDLNRIICAGQYNLVYSP 562
Query: 541 IFHDTFNFLAKRRR 582
I H+ + L+KRRR
Sbjct: 563 ILHENSDLLSKRRR 576
[113][TOP]
>UniRef100_Q0G9X2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Daucus carota
RepID=RPOC2_DAUCA
Length = 1390
Score = 235 bits (600), Expect = 2e-60
Identities = 119/194 (61%), Positives = 144/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F+C+I+LYVTIES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGT T N KE+V+K
Sbjct: 383 FVCSIDLYVTIESEDILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHW+TDVYHA EF Y NVH+LPKTSHLWIL G+ RSD I + KDQDQ+
Sbjct: 443 HIYSDSEGEMHWNTDVYHAPEFTYGNVHLLPKTSHLWILLGEPRRSDLISLSIHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S KR+ S L V++D V+H FFS F KE +YS N+ + + YP
Sbjct: 503 NARSFSVKKRSISNLSVTNDQVRHKFFSSDFFGKKEEEHPDYSELNRIV---RCNLRYPT 559
Query: 541 IFHDTFNFLAKRRR 582
I + ++ LAKRRR
Sbjct: 560 IPYADYDLLAKRRR 573
[114][TOP]
>UniRef100_Q4FFY6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Typha latifolia
RepID=Q4FFY6_TYPLA
Length = 1387
Score = 235 bits (599), Expect = 2e-60
Identities = 117/194 (60%), Positives = 145/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DIIHNV +PPKS +LVQNDQYV+SEQVIAEIRAGT TF+ KERV+K
Sbjct: 382 FLCSIDLYVTIESRDIIHNVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+ EGEMHWSTDVYHA E+ Y NVH+LPKTSHLWIL+G CRS + F L KDQDQ+
Sbjct: 442 HIYSELEGEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILAGGPCRSSIVSFSLHKDQDQM 501
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++DS S R S +++D V+H T K+ I +YS +Q I H +F+YP+
Sbjct: 502 NVDSFSVEGRYISDFSMTNDQVRHKL--LYTSYKKDREILDYSRPDQIISNSHWNFIYPS 559
Query: 541 IFHDTFNFLAKRRR 582
I + +FLAK+RR
Sbjct: 560 ILQENSDFLAKKRR 573
[115][TOP]
>UniRef100_A4QK08 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Arabis hirsuta
RepID=RPOC2_ARAHI
Length = 1371
Score = 235 bits (599), Expect = 2e-60
Identities = 119/194 (61%), Positives = 142/194 (73%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC +L V IES DIIH+V +PPKSFLLVQNDQYV SEQVIAEIR GT TF+ KERV+K
Sbjct: 381 FLCYRDLSVIIESEDIIHSVTIPPKSFLLVQNDQYVDSEQVIAEIREGTSTFHFKERVRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSDSEGEMHWSTDV HA EF YSNVH+LPKTSHLWILSG SC S I F + KDQDQ+
Sbjct: 441 YIYSDSEGEMHWSTDVSHAPEFTYSNVHLLPKTSHLWILSGGSCGSSLILFSIHKDQDQM 500
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ LS +++ S L V++D F S + K++G NYS N I T H +F+Y
Sbjct: 501 NIPFLSAERKSISSLSVNNDQASQKFLSSDFYDKKKSGSPNYSELNGIIGTSHYNFIYST 560
Query: 541 IFHDTFNFLAKRRR 582
IFH+ + LAKRRR
Sbjct: 561 IFHENSDLLAKRRR 574
[116][TOP]
>UniRef100_A9XW91 DNA-directed RNA polymerase (Fragment) n=1 Tax=Leea guineensis
RepID=A9XW91_LEEGU
Length = 1260
Score = 234 bits (597), Expect = 4e-60
Identities = 126/196 (64%), Positives = 145/196 (73%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES IIHNV +PPKSFLLVQN+QYV+SEQVIAEIRAGTYTF KE+V+K
Sbjct: 336 FLCYIDLYVTIESEGIIHNVNIPPKSFLLVQNNQYVESEQVIAEIRAGTYTF--KEKVRK 393
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF Y NVH+LPKTSHLWILSG SCRS + F + KDQDQ+
Sbjct: 394 HIYSDSEGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILSGGSCRSSIVPFSIHKDQDQM 453
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTI--CTDHSHFMY 534
+ SLS +R TS V++D V H FFS KE I YS N+ I T + +
Sbjct: 454 SVRSLSVERRYTS---VTNDQVIHGFFSSDLSGKKEGRIPAYSELNRIIYTYTGRCNLID 510
Query: 535 PAIFHDTFNFLAKRRR 582
PAI H+ + LAKRRR
Sbjct: 511 PAILHENSDLLAKRRR 526
[117][TOP]
>UniRef100_Q6EW58 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Nymphaea alba
RepID=RPOC2_NYMAL
Length = 1401
Score = 233 bits (595), Expect = 6e-60
Identities = 117/195 (60%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC ++LYVTIES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEIRAGT TF+ KERV+K
Sbjct: 382 FLCYVDLYVTIESQDIIHSVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFHFKERVRK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWST VYHA E+ + NVH LPKTSHLWILSG C+S + F L KDQDQ+
Sbjct: 442 HIYSDSEGEMHWSTGVYHAPEYTHGNVHFLPKTSHLWILSGGPCKSSLVPFSLHKDQDQM 501
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTD-HSHFMYP 537
++ SLS +R+ S V+++ VKH F A K IS+Y+ ++ + ++ F+YP
Sbjct: 502 NVQSLSVQERSISDFSVNNNRVKHKLFGSDPLARKGRRISDYAAGSERVISNGDGDFIYP 561
Query: 538 AIFHDTFNFLAKRRR 582
AI + LAKRRR
Sbjct: 562 AILRENSYLLAKRRR 576
[118][TOP]
>UniRef100_A9L986 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lemna minor
RepID=RPOC2_LEMMI
Length = 1366
Score = 233 bits (595), Expect = 6e-60
Identities = 116/194 (59%), Positives = 142/194 (73%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DIIHNV +PPKS +LVQNDQYV+SEQVIAEIRAG T N KE+V+K
Sbjct: 378 FLCSIDLYVTIESQDIIHNVNIPPKSLILVQNDQYVESEQVIAEIRAGAATLNFKEKVRK 437
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWSTDVYHA E+ Y NVH+LPKTSHLWIL+ +CR + F L KDQDQI
Sbjct: 438 HIYSESEGEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILAVGTCRYSIVSFSLHKDQDQI 497
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ SLS +R S L V+ D +H FS + + K G +Y+ + +I H + YP
Sbjct: 498 NAHSLSLEERYISDLSVTKDLARHQLFSSDSSSKKRGGTFDYARPDGSISNGHWNLQYPF 557
Query: 541 IFHDTFNFLAKRRR 582
I H+ +FLAKRRR
Sbjct: 558 ILHENSDFLAKRRR 571
[119][TOP]
>UniRef100_A6MMT4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Illicium
oligandrum RepID=RPOC2_ILLOL
Length = 1385
Score = 233 bits (595), Expect = 6e-60
Identities = 118/196 (60%), Positives = 145/196 (73%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DI+HNV +PPKSF+LVQNDQYV+SEQVIAEIRA T TF+ KE+V+K
Sbjct: 382 FLCYIDLYVTIESQDILHNVNIPPKSFILVQNDQYVESEQVIAEIRARTSTFSFKEKVRK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSG--KSCRSDTIHFLLRKDQD 354
HIYSDSEGE+HWSTDVYH E+ + NVH+LPKT+HLWILSG CR + F L KDQD
Sbjct: 442 HIYSDSEGEIHWSTDVYHVPEYTHGNVHLLPKTTHLWILSGGPGPCRRSIVPFSLHKDQD 501
Query: 355 QIHLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMY 534
Q++L SLS +R S L V++D V+H F F K+ G+ YS ++ + H F+Y
Sbjct: 502 QMNLQSLSVEQRYISNLSVNNDRVRHKLFDLDPFWKKKGGV-GYSGPDRILSNGHWDFIY 560
Query: 535 PAIFHDTFNFLAKRRR 582
PAI H+ N LAKRRR
Sbjct: 561 PAILHENSNLLAKRRR 576
[120][TOP]
>UniRef100_A9QAX6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anethum graveolens
RepID=A9QAX6_9APIA
Length = 1386
Score = 233 bits (594), Expect = 8e-60
Identities = 117/194 (60%), Positives = 141/194 (72%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGT T N KE+V+K
Sbjct: 383 FLCSIDLYVTIESEDILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHW+TDVYHA EF Y NVH+LPKTSHLWIL G+ RSD + + KDQDQ
Sbjct: 443 HIYSDSEGEMHWNTDVYHAPEFTYGNVHLLPKTSHLWILLGEPRRSDLVSLSIHKDQDQT 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S KR+ S L V++D +H FFS KE +YS N+ + + YP
Sbjct: 503 NARSFSVNKRSISNLSVTNDQARHQFFSSDFSGKKEQKRPDYSELNRIV---RCNLRYPT 559
Query: 541 IFHDTFNFLAKRRR 582
I + ++ LAKRRR
Sbjct: 560 ILYADYDLLAKRRR 573
[121][TOP]
>UniRef100_B0Z545 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera
glazioviana RepID=RPOC2_OENGL
Length = 1383
Score = 233 bits (594), Expect = 8e-60
Identities = 118/194 (60%), Positives = 144/194 (74%), Gaps = 1/194 (0%)
Frame = +1
Query: 4 LCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQKH 183
LC+++L VTIES DI+HN+ +PPKSFLLVQN+QYV+SEQVIAEI AGT TF+ KERV+KH
Sbjct: 380 LCSMDLDVTIESEDILHNLTIPPKSFLLVQNNQYVESEQVIAEICAGTSTFHFKERVRKH 439
Query: 184 IYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIH 363
IYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS F L KDQDQ++
Sbjct: 440 IYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSRGAPFSLHKDQDQMN 499
Query: 364 LDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGIS-NYSIFNQTICTDHSHFMYPA 540
S +R S L ++D +++ FFS K+ S YS N+ ICT H + +YP+
Sbjct: 500 PRSTERERRYLSSLSANNDQIRYKFFSSSFSGKKKDDRSPGYSEMNRIICTLHCNLIYPS 559
Query: 541 IFHDTFNFLAKRRR 582
I + + LAKRRR
Sbjct: 560 ILRENSDLLAKRRR 573
[122][TOP]
>UniRef100_Q9MTM3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera elata
subsp. hookeri RepID=RPOC2_OENEH
Length = 1383
Score = 233 bits (594), Expect = 8e-60
Identities = 118/194 (60%), Positives = 144/194 (74%), Gaps = 1/194 (0%)
Frame = +1
Query: 4 LCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQKH 183
LC+++L VTIES DI+HN+ +PPKSFLLVQN+QYV+SEQVIAEI AGT TF+ KERV+KH
Sbjct: 380 LCSMDLDVTIESEDILHNLTIPPKSFLLVQNNQYVESEQVIAEICAGTSTFHFKERVRKH 439
Query: 184 IYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIH 363
IYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS F L KDQDQ++
Sbjct: 440 IYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSRGAPFSLHKDQDQMN 499
Query: 364 LDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGIS-NYSIFNQTICTDHSHFMYPA 540
S +R S L ++D +++ FFS K+ S YS N+ ICT H + +YP+
Sbjct: 500 PRSTERERRYLSSLSANNDQIRYKFFSSSFSGKKKDDRSPGYSEMNRIICTLHCNLIYPS 559
Query: 541 IFHDTFNFLAKRRR 582
I + + LAKRRR
Sbjct: 560 ILRENSDLLAKRRR 573
[123][TOP]
>UniRef100_B0Z4W1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera
biennis RepID=RPOC2_OENBI
Length = 1383
Score = 233 bits (594), Expect = 8e-60
Identities = 118/194 (60%), Positives = 144/194 (74%), Gaps = 1/194 (0%)
Frame = +1
Query: 4 LCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQKH 183
LC+++L VTIES DI+HN+ +PPKSFLLVQN+QYV+SEQVIAEI AGT TF+ KERV+KH
Sbjct: 380 LCSMDLDVTIESEDILHNLTIPPKSFLLVQNNQYVESEQVIAEICAGTSTFHFKERVRKH 439
Query: 184 IYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIH 363
IYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS F L KDQDQ++
Sbjct: 440 IYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSRGAPFSLHKDQDQMN 499
Query: 364 LDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGIS-NYSIFNQTICTDHSHFMYPA 540
S +R S L ++D +++ FFS K+ S YS N+ ICT H + +YP+
Sbjct: 500 PRSTERERRYLSSLSANNDQIRYKFFSSSFSGKKKDDRSPGYSEMNRIICTLHCNLIYPS 559
Query: 541 IFHDTFNFLAKRRR 582
I + + LAKRRR
Sbjct: 560 ILRENSDLLAKRRR 573
[124][TOP]
>UniRef100_Q3V544 DNA-directed RNA polymerase subunit beta'' n=3 Tax=Acorus
RepID=RPOC2_ACOCL
Length = 1386
Score = 233 bits (594), Expect = 8e-60
Identities = 116/194 (59%), Positives = 141/194 (72%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVT+E DIIHNV +PPKS +LVQNDQYV+SEQVIAEIRAGT TFN KERVQK
Sbjct: 382 FLCSIDLYVTVEGRDIIHNVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFNFKERVQK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S GEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG RS + L KDQDQ
Sbjct: 442 HIYSESAGEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGGPYRSSIVSSSLHKDQDQT 501
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S +R S L +++ V+H FS + I +YS +Q I H +F+YP+
Sbjct: 502 NAHSFSVERRYISDLSMTNGRVRHKLFSSDLSGKRGDRILDYSRPDQIISKGHWNFIYPS 561
Query: 541 IFHDTFNFLAKRRR 582
I H+ +FLAKRR+
Sbjct: 562 ILHENSDFLAKRRK 575
[125][TOP]
>UniRef100_Q5QA62 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acorus gramineus
RepID=Q5QA62_ACOGR
Length = 615
Score = 233 bits (593), Expect = 1e-59
Identities = 116/194 (59%), Positives = 141/194 (72%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F+C+I+LYVT+E DIIHNV +PPKSF+LVQNDQYV+SEQVIAEIRAGT TFN KERVQK
Sbjct: 382 FICSIDLYVTVEGRDIIHNVNIPPKSFILVQNDQYVESEQVIAEIRAGTSTFNFKERVQK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S GEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG RS + L KDQDQ
Sbjct: 442 HIYSESAGEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGGLYRSSIVSSSLHKDQDQT 501
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S +R S L +++D +H FS I +YS +Q I H +F+YP+
Sbjct: 502 NAHSFSVERRYISDLSMTNDRGRHKLFSSDLSGKGGDRILDYSRPDQIISRGHWNFIYPS 561
Query: 541 IFHDTFNFLAKRRR 582
I H+ +FLAKRR+
Sbjct: 562 ILHENSDFLAKRRK 575
[126][TOP]
>UniRef100_B7T312 DNA-directed RNA polymerase n=1 Tax=Erodium texanum
RepID=B7T312_EROTE
Length = 1395
Score = 232 bits (592), Expect = 1e-59
Identities = 118/195 (60%), Positives = 141/195 (72%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+ YVTIE DIIH+V +P KSFLLVQNDQYVKSEQVIAEIRAG TF LK+RV+K
Sbjct: 379 FLCSIDFYVTIEGEDIIHSVPIPAKSFLLVQNDQYVKSEQVIAEIRAGKSTFPLKDRVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF YSNVH LPKTSHLWIL G CRSD + F + KDQDQ+
Sbjct: 439 HIYSDSEGEMHWSTDVYHAPEFPYSNVHRLPKTSHLWILLGDLCRSDPVLFSIYKDQDQM 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFAT-KETGISNYSIFNQTICTDHSHFMYP 537
+ SL+ R T +V +D ++H FF + I NYS N+++ T + YP
Sbjct: 499 SIHSLAAQGRYTPSPYVKNDQLRHNFFRLGLYGKGGRIMIRNYSELNESLLTARWNLPYP 558
Query: 538 AIFHDTFNFLAKRRR 582
AI D F+ +AK+RR
Sbjct: 559 AILRDNFHLVAKKRR 573
[127][TOP]
>UniRef100_A9XW70 DNA-directed RNA polymerase (Fragment) n=1 Tax=Elaeagnus sp.
Nickrent 2898 RepID=A9XW70_9ROSA
Length = 1260
Score = 232 bits (592), Expect = 1e-59
Identities = 117/195 (60%), Positives = 143/195 (73%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DIIHNV +PP+SF+LVQNDQYV+SEQVIAEIRAGT F+ KE+V+K
Sbjct: 352 FLCYIDLYVTIESEDIIHNVTIPPQSFILVQNDQYVESEQVIAEIRAGTSAFSFKEKVRK 411
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSD+EGEMHWS DVYHA+EF YSNVH+L KTSHLWILSG CRS + F L KDQDQ
Sbjct: 412 HIYSDAEGEMHWSADVYHAAEFTYSNVHLLLKTSHLWILSGGLCRSSVVPFSLHKDQDQT 471
Query: 361 HLDSLSNGKRNTSPL-FVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYP 537
++ S ++ S L V++ K FF KE+ NYS FN+ + T HS+ ++P
Sbjct: 472 NVHFFSAEGKSISILNTVNNTQGKDKFFRLGLSDKKESSSPNYSEFNRIVYTGHSNLLFP 531
Query: 538 AIFHDTFNFLAKRRR 582
+I H + LAKRRR
Sbjct: 532 SILHKNSDLLAKRRR 546
[128][TOP]
>UniRef100_C3KEF7 DNA-directed RNA polymerase n=1 Tax=Ceratophyllum demersum
RepID=C3KEF7_CERDE
Length = 1390
Score = 232 bits (591), Expect = 2e-59
Identities = 118/194 (60%), Positives = 142/194 (73%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES IIHNV +PPKS +LVQNDQYV+SEQVIAEIR G TF+ KERV+K
Sbjct: 382 FLCYIDLYVTIESQSIIHNVNIPPKSLILVQNDQYVESEQVIAEIRTGASTFHFKERVRK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG CRS + F ++KDQDQI
Sbjct: 442 HIYSDSQGEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGGPCRSSIVPFSIQKDQDQI 501
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+++SL +R S L V++D V+H FS K I +Y I +S F+YPA
Sbjct: 502 NVNSLFVEQRYISDLSVTNDRVRHKIFSSDPSGQKGGRIFDYDSGPDRI-VSNSQFLYPA 560
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 561 IPHENSDLLAKRRR 574
[129][TOP]
>UniRef100_A8SE78 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ceratophyllum
demersum RepID=RPOC2_CERDE
Length = 1390
Score = 232 bits (591), Expect = 2e-59
Identities = 118/194 (60%), Positives = 142/194 (73%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES IIHNV +PPKS +LVQNDQYV+SEQVIAEIR G TF+ KERV+K
Sbjct: 382 FLCYIDLYVTIESQSIIHNVNIPPKSLILVQNDQYVESEQVIAEIRTGASTFHFKERVRK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG CRS + F ++KDQDQI
Sbjct: 442 HIYSDSQGEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGGPCRSSIVPFSIQKDQDQI 501
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+++SL +R S L V++D V+H FS K I +Y I +S F+YPA
Sbjct: 502 NVNSLFVEQRYISDLSVTNDRVRHKIFSSDPSGQKGGRIFDYDSGPDRI-VSNSQFLYPA 560
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 561 IPHENSDLLAKRRR 574
[130][TOP]
>UniRef100_A9XW59 DNA-directed RNA polymerase (Fragment) n=1 Tax=Celtis occidentalis
RepID=A9XW59_9ROSA
Length = 1259
Score = 231 bits (590), Expect = 2e-59
Identities = 119/196 (60%), Positives = 142/196 (72%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYV IE DIIH V +PPKS +LVQNDQYV+SEQVIAEIRAGT TFN KERVQK
Sbjct: 348 FLCSIDLYVIIEGEDIIHKVTIPPKSLILVQNDQYVESEQVIAEIRAGTSTFNFKERVQK 407
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA +F YSNVH+LPKTSHLWILSG S RS + F + KDQDQ
Sbjct: 408 HIYSDSEGEMHWSTDVYHAPDFTYSNVHLLPKTSHLWILSGSSYRSSIVPFSIHKDQDQT 467
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ S +++S V++D K FFS KE+ I +YS NQ I H + + +
Sbjct: 468 NVYFRSAKGKSSSVNIVNNDQEKDKFFSSNLSGKKESSIPDYSELNQIIDRGHWNLILTS 527
Query: 541 IFHDTFNF--LAKRRR 582
I H+ +F LAKRRR
Sbjct: 528 ILHNNSDFFLLAKRRR 543
[131][TOP]
>UniRef100_C3UNW2 DNA-directed RNA polymerase n=1 Tax=Megaleranthis saniculifolia
RepID=C3UNW2_9MAGN
Length = 1383
Score = 231 bits (589), Expect = 3e-59
Identities = 116/194 (59%), Positives = 140/194 (72%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIE DI+HNV +PPKSF+LV+NDQYV+SEQVIAEIRA T N KERV+K
Sbjct: 379 FLCYIDLYVTIEGQDILHNVNIPPKSFILVKNDQYVESEQVIAEIRAEASTLNFKERVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWST VYHA E+ Y NVH+LPKTSHLWILSG RS + F L KDQDQI
Sbjct: 439 HIYSDSEGEMHWSTAVYHAPEYTYGNVHLLPKTSHLWILSGVPYRSSIVPFSLHKDQDQI 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SLS+ ++ S L V++D V+H F K + YS ++ I H +F+YPA
Sbjct: 499 NIHSLSSERKYISNLSVTNDQVRHKLFRSDPSGKKRERVLYYSEPDRIIWNGHCNFIYPA 558
Query: 541 IFHDTFNFLAKRRR 582
I D + LAKRRR
Sbjct: 559 ILDDNSDLLAKRRR 572
[132][TOP]
>UniRef100_A9XW85 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hypseocharis
bilobata RepID=A9XW85_9ROSI
Length = 1276
Score = 231 bits (588), Expect = 4e-59
Identities = 114/196 (58%), Positives = 146/196 (74%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYV IES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEIRAGT TF++++RV+K
Sbjct: 350 FLCYIDLYVIIESEDIIHSVPIPPKSFLLVQNDQYVESEQVIAEIRAGTSTFHVQDRVRK 409
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA +F YSNVH+LPKTSHLW+LSG C+S + F + KDQDQ+
Sbjct: 410 HIYSDSEGEMHWSTDVYHAPQFPYSNVHLLPKTSHLWLLSGGLCKSSPVLFSIYKDQDQM 469
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATK--ETGISNYSIFNQTICTDHSHFMY 534
++ SLS R V+ D ++H +F + + I NYS ++++ T S+ Y
Sbjct: 470 NIHSLSVQGRYPPSRSVNHDQLRHKLLTFDLYDKRGGRLPIPNYSELDRSLSTARSNLPY 529
Query: 535 PAIFHDTFNFLAKRRR 582
PAI H+ + LAK+RR
Sbjct: 530 PAILHENLDLLAKKRR 545
[133][TOP]
>UniRef100_A9XW77 DNA-directed RNA polymerase (Fragment) n=1 Tax=Guaiacum officinale
RepID=A9XW77_9ROSI
Length = 1110
Score = 230 bits (586), Expect = 7e-59
Identities = 114/193 (59%), Positives = 144/193 (74%)
Frame = +1
Query: 4 LCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQKH 183
+C+I+LYVTI+S DI+HNV +PPKSFLLVQN+QYV+SEQVIAEIRA T +KERV+KH
Sbjct: 349 ICDIDLYVTIKSEDILHNVTIPPKSFLLVQNEQYVQSEQVIAEIRAKTDNLIVKERVRKH 408
Query: 184 IYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIH 363
IYSDSEGEMHWSTDVYHA E+ YSNVH+LPKTSHLWILSG SC+S + L KDQDQ+
Sbjct: 409 IYSDSEGEMHWSTDVYHAPEWTYSNVHLLPKTSHLWILSGGSCKSSVLPLSLHKDQDQMS 468
Query: 364 LDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAI 543
L+S S +++ S L +++D V+ S F K+T + S+ N +I H F+YPAI
Sbjct: 469 LNSSSVEEKDLSNLSLNNDQVRRQLLSSDFFGKKKTLLPYSSVLNPSIGIGHCDFIYPAI 528
Query: 544 FHDTFNFLAKRRR 582
+ + LAKRRR
Sbjct: 529 LQENSDLLAKRRR 541
[134][TOP]
>UniRef100_B0Z5C9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera
parviflora RepID=RPOC2_OENPA
Length = 1383
Score = 229 bits (584), Expect = 1e-58
Identities = 117/194 (60%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Frame = +1
Query: 4 LCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQKH 183
LC+++L VTIES DI+HN+ +PPKSFLLVQN+QYV+SEQVIAEI AGT TF+ KERV+KH
Sbjct: 380 LCSMDLDVTIESEDILHNLTIPPKSFLLVQNNQYVESEQVIAEICAGTSTFHFKERVRKH 439
Query: 184 IYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIH 363
IYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS F L KDQDQ++
Sbjct: 440 IYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSRGAPFSLHKDQDQMN 499
Query: 364 LDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGIS-NYSIFNQTICTDHSHFMYPA 540
S +R S L ++D +++ FFS K+ S YS N+ ICT + +YP+
Sbjct: 500 PRSTERERRYLSSLSANNDQIRYKFFSSSFSGKKKDDRSPGYSEMNRIICTLPCNLIYPS 559
Query: 541 IFHDTFNFLAKRRR 582
I + + LAKRRR
Sbjct: 560 ILRENSDLLAKRRR 573
[135][TOP]
>UniRef100_B0Z4M7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oenothera
argillicola RepID=RPOC2_OENAR
Length = 1383
Score = 229 bits (584), Expect = 1e-58
Identities = 117/194 (60%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Frame = +1
Query: 4 LCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQKH 183
LC+++L VTIES DI+HN+ +PPKSFLLVQN+QYV+SEQVIAEI AGT TF+ KERV+KH
Sbjct: 380 LCSMDLDVTIESEDILHNLTIPPKSFLLVQNNQYVESEQVIAEICAGTSTFHFKERVRKH 439
Query: 184 IYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIH 363
IYSDSEGEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS F L KDQDQ++
Sbjct: 440 IYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSRGAPFSLHKDQDQMN 499
Query: 364 LDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGIS-NYSIFNQTICTDHSHFMYPA 540
S +R S L ++D +++ FFS K+ S YS N+ ICT + +YP+
Sbjct: 500 PRSTERERRYLSSLSANNDQIRYKFFSSSFSGKKKDDRSPGYSEMNRIICTLPCNLIYPS 559
Query: 541 IFHDTFNFLAKRRR 582
I + + LAKRRR
Sbjct: 560 ILRENSDLLAKRRR 573
[136][TOP]
>UniRef100_Q4FFY5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Yucca schidigera
RepID=Q4FFY5_9ASPA
Length = 1384
Score = 229 bits (583), Expect = 2e-58
Identities = 112/194 (57%), Positives = 145/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DIIH+V +PPKS +LVQNDQYV+SEQVIAEIRAGT TF+ KE+V+K
Sbjct: 382 FLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKEKVRK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWSTDVYHA E+ YSNVH+LPKTSHLWIL+G C S + F L KDQDQ+
Sbjct: 442 HIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWILAGGPCGSSIVSFSLHKDQDQM 501
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ S + + S L +++D V+H K+ I +YS ++ I H +F+YP+
Sbjct: 502 NVHFFSVDEIDISDLSITNDRVRHKLLD--PSGKKDREILDYSRLDRIISNGHWNFIYPS 559
Query: 541 IFHDTFNFLAKRRR 582
I + +FLAK+RR
Sbjct: 560 ILQENSDFLAKKRR 573
[137][TOP]
>UniRef100_A9XW55 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cannabis sativa
RepID=A9XW55_CANSA
Length = 1275
Score = 229 bits (583), Expect = 2e-58
Identities = 120/199 (60%), Positives = 145/199 (72%), Gaps = 5/199 (2%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+L V IES DIIHNV +PPKS +LVQNDQYV+SEQVIAEIRA T TFN KE+V+K
Sbjct: 352 FLCSIDLDVIIESEDIIHNVTIPPKSLILVQNDQYVESEQVIAEIRARTSTFNFKEKVRK 411
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA +F YSNVH+LPKTSHLWILSG S RS + F + KDQDQ
Sbjct: 412 HIYSDSEGEMHWSTDVYHAPDFTYSNVHLLPKTSHLWILSGSSYRSSVVPFSIHKDQDQT 471
Query: 361 HLDSLSNGKRNTSPL---FVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFM 531
++ LS +N S V++D K FFS KE+ I +YS FN+ I DH + +
Sbjct: 472 NVYFLSAEGKNISSRSVNTVNNDQGKGKFFSSDFSGKKESTIPDYSEFNRIIDRDHWNLI 531
Query: 532 YPAIFHDTFN--FLAKRRR 582
+P+I H ++ LAKRRR
Sbjct: 532 FPSILHKNYDLFLLAKRRR 550
[138][TOP]
>UniRef100_A9XWA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Parnassia palustris
RepID=A9XWA3_PARPL
Length = 1267
Score = 228 bits (581), Expect = 3e-58
Identities = 119/196 (60%), Positives = 140/196 (71%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES I+HNV +P KSFLLVQNDQYV+SEQVIAEIRAG YT N KERV+K
Sbjct: 352 FLCYIDLYVTIESEGILHNVTIPEKSFLLVQNDQYVESEQVIAEIRAGAYTLNFKERVRK 411
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGE+HWSTDVYH SEF YSNVH+LP+TSHLWIL G S RS + F + +DQ Q
Sbjct: 412 HIYSDSEGEIHWSTDVYHTSEFAYSNVHLLPRTSHLWILKGGSYRSSAVSFSIHQDQVQ- 470
Query: 361 HLDSLSNGKRNTSPLFV--SDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMY 534
SLS R S V + D V+ FFS + IS+ FN+ ICT H + +Y
Sbjct: 471 ---SLSGEGRFLSNFSVNTNQDQVRCGFFSSYLSGKNTSKISDSLEFNRIICTSHCNLIY 527
Query: 535 PAIFHDTFNFLAKRRR 582
PA H +++FLAKRRR
Sbjct: 528 PASLHKSYSFLAKRRR 543
[139][TOP]
>UniRef100_Q06RE1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Jasminum
nudiflorum RepID=RPOC2_JASNU
Length = 1397
Score = 228 bits (580), Expect = 3e-58
Identities = 114/196 (58%), Positives = 139/196 (70%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEI GT T N KE+V+K
Sbjct: 383 FLCSIDLYVTIESEDILHNVNIPPKSFLLVQNDQYVESEQVIAEICVGTSTLNFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HI+SDS+GEMHWSTDVYHA EF Y NVH+LPKTSHLWIL G CRS + KDQDQ+
Sbjct: 443 HIFSDSDGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILLGGPCRSSRVSLSFHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFS--FKTFATKETGISNYSIFNQTICTDHSHFMY 534
+ S S +R TS L ++D + FS F K+ IS+YS NQ +CT H +F+
Sbjct: 503 NAHSPSIKRRYTSNLSETNDPERQKLFSSYFYGKKKKKNRISDYSNLNQILCTGHCNFIS 562
Query: 535 PAIFHDTFNFLAKRRR 582
P H + +KRR+
Sbjct: 563 PTTLHQNSDLFSKRRK 578
[140][TOP]
>UniRef100_Q49C99 RpoC2 (Fragment) n=1 Tax=Cuscuta europaea RepID=Q49C99_CUSEU
Length = 407
Score = 226 bits (576), Expect = 1e-57
Identities = 118/201 (58%), Positives = 143/201 (71%), Gaps = 7/201 (3%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+H V +PPKSFLLVQNDQYV+SEQVIAEIRAGT T N KE+V+K
Sbjct: 29 FLCSIDLYVTIESEDILHTVTIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKEKVRK 88
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GEMHWSTDVYHA EF Y NVH+L KTSHLWIL G+ RS + + +DQDQ+
Sbjct: 89 HIYSDSDGEMHWSTDVYHAPEFTYGNVHLLSKTSHLWILFGEPRRSSLVSLSIHRDQDQM 148
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
SLS +R TS L ++D + FS KE I++YS N+ I TDH + +YPA
Sbjct: 149 SAHSLSVKRRYTSNLSETNDRARQKIFSADFSGKKEDRIADYSDLNRIIYTDHYNLVYPA 208
Query: 541 I-----FHDTF--NFLAKRRR 582
I + F N L+KRRR
Sbjct: 209 IPPILDENSDFLSNLLSKRRR 229
[141][TOP]
>UniRef100_A9XWC3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Terminalia catappa
RepID=A9XWC3_TERCT
Length = 1274
Score = 226 bits (576), Expect = 1e-57
Identities = 116/194 (59%), Positives = 144/194 (74%), Gaps = 1/194 (0%)
Frame = +1
Query: 4 LCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQKH 183
LC+++L VTIES DI+H V +PPKSFLLVQN+QYV+SEQVIAEIRAGT TFN KERV+KH
Sbjct: 349 LCSLDLDVTIESEDILHKVTIPPKSFLLVQNNQYVESEQVIAEIRAGTDTFNFKERVRKH 408
Query: 184 IYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIH 363
IYSDSEGE+ WST VYHA EF+Y+NVH+L KTSHLWILSG SC I F L KDQDQ++
Sbjct: 409 IYSDSEGEVQWSTGVYHAPEFIYANVHLLSKTSHLWILSGGSCIFSGIPFSLHKDQDQMN 468
Query: 364 LDSLSNGKRNTSPLFVSDDHVKHPFFSFK-TFATKETGISNYSIFNQTICTDHSHFMYPA 540
L S +R+ S L V++D +++ FS + KE I +YS N+ IC + +YPA
Sbjct: 469 LRSSYVERRSLSSLSVNNDQIRYKLFSSNFSGKKKEDRIPDYSELNRIICIGQWNLIYPA 528
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 529 ILHENSDLLAKRRR 542
[142][TOP]
>UniRef100_A9QBM2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Musa acuminata
RepID=A9QBM2_MUSAC
Length = 1359
Score = 226 bits (575), Expect = 1e-57
Identities = 113/195 (57%), Positives = 146/195 (74%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+HNV +PPKSF+LVQN+QYV+SEQVIAEIRAGT TF+ KE+V+K
Sbjct: 378 FLCSIDLYVTIESRDILHNVNIPPKSFILVQNNQYVESEQVIAEIRAGTSTFHFKEKVRK 437
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWSTDV+HA E+ Y NVH+L KTSHLWIL+G CRS + F L KDQDQ+
Sbjct: 438 HIYSESEGEMHWSTDVHHAPEYTYGNVHLLSKTSHLWILAGGPCRSSIVSFSLHKDQDQM 497
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIF-NQTICTDHSHFMYP 537
++ S S +R S L +++ ++H T K+ I +YSI +QT+ H +F+YP
Sbjct: 498 NVYSFSVEERYISDLSMTNGRIRHKLLD--TSGKKDKKIIDYSIRPDQTMSNGHLNFIYP 555
Query: 538 AIFHDTFNFLAKRRR 582
+I FLAK+RR
Sbjct: 556 SIIQGNSYFLAKKRR 570
[143][TOP]
>UniRef100_Q56P11 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lactuca sativa
RepID=RPOC2_LACSA
Length = 1381
Score = 225 bits (573), Expect = 2e-57
Identities = 118/196 (60%), Positives = 140/196 (71%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+ +LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRA T T NLKE+V+K
Sbjct: 383 FLCSRDLYVTIESEDIIHNVCIPPKSFLLVQNDQYVESEQVIAEIRARTSTLNLKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHW+TDVYHA EF Y N+H+LPKTSHLWIL G+ R + KDQDQ+
Sbjct: 443 HIYSDSEGEMHWNTDVYHAPEFTYGNIHLLPKTSHLWILLGEPWRYSLGPCSIHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFS--FKTFATKETGISNYSIFNQTICTDHSHFMY 534
+ SLS R + V+++ V+H FFS F K I + S N+ CTDHS+ Y
Sbjct: 503 NAYSLSVKPRYIANPSVTNNQVRHKFFSSYFSGKNQKGDRIPDCSELNRMTCTDHSNLRY 562
Query: 535 PAIFHDTFNFLAKRRR 582
PAI + LAKRRR
Sbjct: 563 PAILDGNSDLLAKRRR 578
[144][TOP]
>UniRef100_A9QBC9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Elaeis oleifera
RepID=A9QBC9_ELAOL
Length = 1375
Score = 224 bits (572), Expect = 3e-57
Identities = 111/194 (57%), Positives = 144/194 (74%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIE+ DIIHNV +PPKS +LVQNDQYV+SEQVIAEIRAGT TF KE+V+K
Sbjct: 382 FLCSIDLYVTIETRDIIHNVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFRFKEKVRK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWSTDV+HASE+ + NVH+LPKTSHLWIL+G CRS + F L KDQDQ+
Sbjct: 442 HIYSESEGEMHWSTDVHHASEYTHGNVHLLPKTSHLWILAGGPCRSSIVSFSLHKDQDQM 501
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ S S +R +++ V+H T K+ I +YS ++ I H +F+YP+
Sbjct: 502 NVHSFSFEERYIFDPSMTNHRVRHKLLD--TSGKKDREILDYSRPDRIISNGHWNFIYPS 559
Query: 541 IFHDTFNFLAKRRR 582
I + +FLAK+RR
Sbjct: 560 ILQENSDFLAKKRR 573
[145][TOP]
>UniRef100_B7T3M4 DNA-directed RNA polymerase n=1 Tax=Geranium palmatum
RepID=B7T3M4_9ROSI
Length = 1417
Score = 224 bits (571), Expect = 4e-57
Identities = 114/196 (58%), Positives = 142/196 (72%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+ YVTIES +IIH V + PKSFLLVQNDQYV+SEQVIAEIRAGT TF LK+RV+K
Sbjct: 379 FLCYIDFYVTIESENIIHRVPIRPKSFLLVQNDQYVESEQVIAEIRAGTSTFALKDRVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSDSEGE+HWSTDVYHA EF+Y+NVH+LPKTSHLWIL G CRS F + KDQDQ+
Sbjct: 439 YIYSDSEGEIHWSTDVYHAPEFVYTNVHLLPKTSHLWILLGDLCRSGPSLFSIYKDQDQM 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATK--ETGISNYSIFNQTICTDHSHFMY 534
+ SLS R T L V +D ++H F S + + I NYS N+++ T + Y
Sbjct: 499 SIHSLSAQGRYTPILSVKNDQLRHKFLSLDLYGKRVDRIPIRNYSELNRSLLTAPCNLPY 558
Query: 535 PAIFHDTFNFLAKRRR 582
PAI + F+ +AK+R+
Sbjct: 559 PAILRENFDLVAKKRK 574
[146][TOP]
>UniRef100_B7T382 DNA-directed RNA polymerase n=1 Tax=Geranium carolinianum
RepID=B7T382_9ROSI
Length = 1420
Score = 224 bits (571), Expect = 4e-57
Identities = 114/196 (58%), Positives = 138/196 (70%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+ YVTIES DIIH+V VPPKSFLLVQN+QYV+SEQVIAEIRAGT TF K+RV+K
Sbjct: 379 FLCYIDFYVTIESEDIIHSVPVPPKSFLLVQNEQYVESEQVIAEIRAGTSTFAFKDRVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGE+HWSTDVYHA EF YSNVH+LPKTSHLWIL G CRS F + KDQDQ
Sbjct: 439 HIYSDSEGELHWSTDVYHAPEFAYSNVHLLPKTSHLWILLGNLCRSGLALFSIYKDQDQT 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATK--ETGISNYSIFNQTICTDHSHFMY 534
+ SLS R T V +D ++H FS + + I NYS N+++ T + Y
Sbjct: 499 SIHSLSAQGRYTPSPSVKNDQLRHKLFSLGLYGKRGGRILIRNYSELNRSLLTARCNLPY 558
Query: 535 PAIFHDTFNFLAKRRR 582
P I + + +AK+R+
Sbjct: 559 PTILRENLDLVAKKRK 574
[147][TOP]
>UniRef100_Q1KXX0 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Helianthus
annuus RepID=RPOC2_HELAN
Length = 1362
Score = 224 bits (570), Expect = 5e-57
Identities = 117/196 (59%), Positives = 139/196 (70%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+ +LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRA T T NLKE+V+K
Sbjct: 383 FLCSRDLYVTIESEDIIHNVCIPPKSFLLVQNDQYVESEQVIAEIRARTSTLNLKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHW+TDVYHA EF Y N+H+LPKTSHLWIL G+ RS + KDQDQ+
Sbjct: 443 HIYSDSEGEMHWNTDVYHAPEFTYGNIHLLPKTSHLWILLGEPWRSSLGPCSIHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFS--FKTFATKETGISNYSIFNQTICTDHSHFMY 534
+ SLS +R S V+++ V+H FFS F K I +YS N+ CT + Y
Sbjct: 503 NAYSLSVKRRYISNPSVTNNQVRHKFFSSYFSGKNKKGDRIPDYSELNRMTCTGRCNLRY 562
Query: 535 PAIFHDTFNFLAKRRR 582
P I + LAKRRR
Sbjct: 563 PGILDGNSDLLAKRRR 578
[148][TOP]
>UniRef100_B2LMI2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Guizotia
abyssinica RepID=RPOC2_GUIAB
Length = 1381
Score = 224 bits (570), Expect = 5e-57
Identities = 117/196 (59%), Positives = 139/196 (70%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+ +LYVTIES DIIHNV +PPKSFLLVQNDQYV+SEQVIAEIRA T T NLKE+V+K
Sbjct: 383 FLCSRDLYVTIESEDIIHNVCIPPKSFLLVQNDQYVESEQVIAEIRARTSTLNLKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHW+TDVYHA EF Y N+H+LPKTSHLWIL G+ RS + KDQDQ+
Sbjct: 443 HIYSDSEGEMHWNTDVYHAPEFTYGNIHLLPKTSHLWILLGEPWRSSLGPCSIHKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFS--FKTFATKETGISNYSIFNQTICTDHSHFMY 534
+ SLS +R S V+++ V+H FFS F K I +YS N+ CT + Y
Sbjct: 503 NAYSLSVKRRYISNPSVTNNQVRHKFFSSYFSGKNQKGDRIPDYSELNRMTCTGRCNLRY 562
Query: 535 PAIFHDTFNFLAKRRR 582
P I + LAKRRR
Sbjct: 563 PGILDGNSDLLAKRRR 578
[149][TOP]
>UniRef100_P60289 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Amborella
trichopoda RepID=RPOC2_AMBTC
Length = 1373
Score = 224 bits (570), Expect = 5e-57
Identities = 116/194 (59%), Positives = 142/194 (73%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+L+VTIES DIIH V +PPKSFLLVQNDQYV+SEQVIAEIRAGT T LKERVQK
Sbjct: 384 FLCHIDLHVTIESQDIIHKVNIPPKSFLLVQNDQYVESEQVIAEIRAGTST--LKERVQK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYH E+ + NVH+LPKTSHLW+LSG CRS + F L KDQDQ+
Sbjct: 442 HIYSDSEGEMHWSTDVYHTPEYTHGNVHLLPKTSHLWVLSGSPCRSSIVPFPLHKDQDQM 501
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ SL +R S L +++D V+H F + K +S YS ++ I + +YP
Sbjct: 502 NVQSLYVEERYISDLSMNNDRVRHKLFGWD---QKRGRVSYYSGPDRIISNRNWDSIYPL 558
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRRR
Sbjct: 559 ILHENSDLLAKRRR 572
[150][TOP]
>UniRef100_A8W3B4 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Cuscuta exaltata
RepID=RPOC2_CUSEX
Length = 1379
Score = 223 bits (568), Expect = 9e-57
Identities = 114/201 (56%), Positives = 144/201 (71%), Gaps = 7/201 (3%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F C+I LYVTIES DI+H+V +PPKSF+LVQNDQYV+SEQVIAE RAGT TFN KE+V+K
Sbjct: 383 FFCSIYLYVTIESQDILHHVKIPPKSFILVQNDQYVESEQVIAESRAGTSTFNYKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS GEMHWST+VYHA EF Y NVH+L KTSHLWIL G+ C S + + +DQDQ+
Sbjct: 443 HIYSDSGGEMHWSTNVYHAPEFTYGNVHLLSKTSHLWILLGEPCHSSLVSTSIHRDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ SLS +R+TS L ++D S KE I+++S N++ICTDH + +YPA
Sbjct: 503 SVQSLSVKRRSTSKLSETNDEANQEIASADFSGKKEDRIADFSDVNRSICTDHYNLVYPA 562
Query: 541 IF-----HDTF--NFLAKRRR 582
I + +F N L+KRRR
Sbjct: 563 ILPILDENSSFFSNCLSKRRR 583
[151][TOP]
>UniRef100_P11704 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Spinacia
oleracea RepID=RPOC2_SPIOL
Length = 1361
Score = 223 bits (567), Expect = 1e-56
Identities = 119/194 (61%), Positives = 141/194 (72%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DI+HNV +PPKSFLLVQNDQYV+SEQVIAEIRAGT T N KERV+K
Sbjct: 383 FLCYIDLYVTIESDDILHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF Y NVH+LPKTSHLW+LSGK RS + F L KDQDQ+
Sbjct: 443 HIYSDSEGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWVLSGKPYRSSVVPFSLSKDQDQM 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ SLS + S V++D VK +F+ KE I++YS N+ H + +YPA
Sbjct: 503 NTHSLSFEQIYISNPSVTNDQVKDKLSD--SFSKKEDRITDYSELNR---IGHCNLIYPA 557
Query: 541 IFHDTFNFLAKRRR 582
+ LAK+RR
Sbjct: 558 ---KNLDLLAKKRR 568
[152][TOP]
>UniRef100_A9XWD0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zelkova serrata
RepID=A9XWD0_9ROSA
Length = 1247
Score = 222 bits (566), Expect = 1e-56
Identities = 119/199 (59%), Positives = 140/199 (70%), Gaps = 5/199 (2%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DI+HNV +PPKS +LVQNDQYV+SEQVIAEIRAGTY+FN KERV+K
Sbjct: 331 FLCYIDLYVTIESEDILHNVTIPPKSLILVQNDQYVESEQVIAEIRAGTYSFNFKERVRK 390
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWS DVYHA EF YSNVH+LPKTSHLWILSG CRS + F + KDQDQ
Sbjct: 391 HIYSDSEGEMHWSIDVYHAPEFTYSNVHLLPKTSHLWILSGGLCRSSGVLFSIHKDQDQT 450
Query: 361 HLDSLSNGKRNTSPL---FVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFM 531
++ LS+ ++ S L V+D+ VK+ FFS KE+ I I
Sbjct: 451 NIYFLSDKEKKISSLSVNTVNDNQVKNKFFSSGLSGKKESSIPGTLII------------ 498
Query: 532 YPAIFHDT--FNFLAKRRR 582
P+I H+ F LAKRRR
Sbjct: 499 -PSILHNNSYFFLLAKRRR 516
[153][TOP]
>UniRef100_A9XW41 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ailanthus altissima
RepID=A9XW41_AILAL
Length = 1279
Score = 222 bits (565), Expect = 2e-56
Identities = 117/199 (58%), Positives = 140/199 (70%), Gaps = 5/199 (2%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYV IES D++HNV +PPKSFLLVQNDQYV+SEQVIAEIRAG YT N KERV+K
Sbjct: 350 FLCYIDLYVIIESEDVMHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGAYTLNFKERVRK 409
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHW T YSNVH+LPKTSHLWILSG S RS + F L KDQDQ+
Sbjct: 410 HIYSDSEGEMHWRTXXXXXXXXTYSNVHLLPKTSHLWILSGGSGRSSVVSFSLHKDQDQM 469
Query: 361 HLDSLSNGKRNTS--PLFVSDDHVKHPFFSFKTFATKETG---ISNYSIFNQTICTDHSH 525
++ SLS +R+ S L V++D +H FS A KE G I +YS N+ I T H +
Sbjct: 470 NIHSLSVERRDISSLSLSVNNDQTRHKLFSSDFSAKKEGGILEIPDYSGLNRIIGTGHWN 529
Query: 526 FMYPAIFHDTFNFLAKRRR 582
++ I H+ + LAKRRR
Sbjct: 530 LIHTVILHENSDLLAKRRR 548
[154][TOP]
>UniRef100_B7T3F3 DNA-directed RNA polymerase n=1 Tax=Geranium macrorrhizum
RepID=B7T3F3_9ROSI
Length = 1421
Score = 219 bits (558), Expect = 1e-55
Identities = 112/196 (57%), Positives = 139/196 (70%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+ YVTIES +IIH+V +PPKSFLLVQNDQYV+SEQVIAEIRA TF LK+RV+K
Sbjct: 379 FLCYIDFYVTIESENIIHSVPIPPKSFLLVQNDQYVESEQVIAEIRARISTFALKDRVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGE+HWSTDV HA EF Y+NVH+LPKTSHLWIL G CRS F + KDQDQ+
Sbjct: 439 HIYSDSEGEIHWSTDVDHAPEFAYTNVHLLPKTSHLWILLGDLCRSGPALFSIYKDQDQM 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATK--ETGISNYSIFNQTICTDHSHFMY 534
+ SLS R T V +D ++H FS + + I NYS N+++ T + Y
Sbjct: 499 SIHSLSAQSRYTPSPSVKNDQLRHKLFSLGLYGKRGDRIPIRNYSELNRSLLTAPCNLPY 558
Query: 535 PAIFHDTFNFLAKRRR 582
PAI + F+ +AK+R+
Sbjct: 559 PAILRENFDLVAKKRK 574
[155][TOP]
>UniRef100_Q06FX1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Pelargonium x
hortorum RepID=RPOC2_PELHO
Length = 1376
Score = 219 bits (557), Expect = 2e-55
Identities = 115/199 (57%), Positives = 142/199 (71%), Gaps = 5/199 (2%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LY+TIES DIIH+V +PPKSFLLVQNDQYV+SEQVIAEI AGT TF K+RV+K
Sbjct: 380 FLCYIDLYLTIESEDIIHSVPIPPKSFLLVQNDQYVESEQVIAEISAGTSTFAFKDRVRK 439
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS GEMH +T +YHA +F +SNVHILPKTSHLWIL G C S + F + KDQDQ+
Sbjct: 440 HIYSDSSGEMHSNTGMYHARKFPFSNVHILPKTSHLWILLGDLCGSGPVLFSMYKDQDQM 499
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETG-----ISNYSIFNQTICTDHSH 525
+ SLS RNT L V++D +KH S + TG I NYS +++ T +
Sbjct: 500 SIHSLSVQGRNTPSLSVNNDQLKHRRLSL--YDKNGTGGGSIPILNYSEMTRSLSTARCN 557
Query: 526 FMYPAIFHDTFNFLAKRRR 582
+YPAI H+ F+ LAK+RR
Sbjct: 558 LLYPAILHENFSLLAKKRR 576
[156][TOP]
>UniRef100_Q06GS0 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Piper cenocladum
RepID=RPOC2_PIPCE
Length = 1380
Score = 218 bits (556), Expect = 2e-55
Identities = 113/197 (57%), Positives = 143/197 (72%), Gaps = 3/197 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES DI+H V +PPKSF+LVQN+QYV+SEQVIAEIRAGT + KE+V+K
Sbjct: 383 FLCYIDLYVTIESRDILHKVNIPPKSFILVQNNQYVESEQVIAEIRAGTSALSFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWST+VYH ++ Y NVH+LPKTSHLWILSG C+S+ F L KDQDQ+
Sbjct: 443 HIYSDSEGEMHWSTNVYHTPQYTYGNVHLLPKTSHLWILSGNPCKSNGALFSLHKDQDQM 502
Query: 361 HLDSLSNG--KRNTSPLFVSDDHVKHPFFSFKTFATKETG-ISNYSIFNQTICTDHSHFM 531
+L SLS +R+ S V++D V+ FS G +YS+ +++I D +F+
Sbjct: 503 NLYSLSLSLEQRSISDFSVTNDRVRRKSFSLDPSREGRGGRFFDYSVPDKSIPNDCWNFI 562
Query: 532 YPAIFHDTFNFLAKRRR 582
Y AI H+ FLAKRRR
Sbjct: 563 YSAILHENSYFLAKRRR 579
[157][TOP]
>UniRef100_Q49CA6 RpoC2 (Fragment) n=1 Tax=Cuscuta japonica RepID=Q49CA6_CUSJA
Length = 411
Score = 218 bits (555), Expect = 3e-55
Identities = 112/201 (55%), Positives = 137/201 (68%), Gaps = 7/201 (3%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I LYVTIES DI+H+V +PPKSF+LVQNDQYV+SEQ IAE RAGT T N KE+V+K
Sbjct: 30 FLCSIYLYVTIESQDILHHVKIPPKSFILVQNDQYVESEQAIAETRAGTSTLNYKEKVRK 89
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS GEMHWST+VYHA EF Y NVH+L KTSHLWIL G C S + + +DQDQ+
Sbjct: 90 HIYSDSVGEMHWSTNVYHAPEFTYGNVHLLSKTSHLWILLGDPCHSSLVSTSIHRDQDQM 149
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
SLS +R TS L +++ KH KE I+ YS N ++CTDH + +YPA
Sbjct: 150 SAQSLSVKRRYTSKLSETNEEAKHEIACADFSGKKEDRIAYYSDVNPSLCTDHYNLVYPA 209
Query: 541 IF-------HDTFNFLAKRRR 582
I + N L+KRRR
Sbjct: 210 ILPILDDNSYFFSNCLSKRRR 230
[158][TOP]
>UniRef100_A9XW84 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hypericum kalmianum
RepID=A9XW84_9ROSI
Length = 1289
Score = 215 bits (548), Expect = 2e-54
Identities = 110/194 (56%), Positives = 136/194 (70%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC +LYVTIES + NV +P KS L VQNDQYVKSEQVIAEI AG YT NLKE+V+K
Sbjct: 350 FLCYKDLYVTIESQYTLQNVSIPSKSLLFVQNDQYVKSEQVIAEICAGAYTLNLKEKVRK 409
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWSTDVYHA EF YSNVH+LPKTSHLWIL+ SC+S T F L KDQDQ+
Sbjct: 410 HIYSESEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILASSSCKSSTGTFSLHKDQDQM 469
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
SL +R++S ++D V++ F S E+ I +Y N+ + T + + PA
Sbjct: 470 SAHSLYVERRSSSNPSANNDQVQYQFISSNLLEKNESRIPDYLKLNRILGTAYCNRTDPA 529
Query: 541 IFHDTFNFLAKRRR 582
I H+ + LAKRR+
Sbjct: 530 ILHENADLLAKRRK 543
[159][TOP]
>UniRef100_A9QC90 DNA-directed RNA polymerase (Fragment) n=1 Tax=Trachelium caeruleum
RepID=A9QC90_TRACE
Length = 1394
Score = 215 bits (548), Expect = 2e-54
Identities = 109/194 (56%), Positives = 138/194 (71%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I++YVTIES DIIHNV +P KSFLLVQNDQYV+SEQVIAEIRAGT T +LKE+V+K
Sbjct: 381 FLCSIDVYVTIESEDIIHNVSIPSKSFLLVQNDQYVESEQVIAEIRAGTATLSLKEKVRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHW+TDVYHA E Y NVH+LPKTSHLWIL G+ +S + + KDQDQ+
Sbjct: 441 HIYSDSEGEMHWNTDVYHAPELKYGNVHLLPKTSHLWILLGEPWKSSLVCLSIHKDQDQM 500
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S +R S V+++ ++ FFS + + GI +YS N+ CT + A
Sbjct: 501 NAHSRSGKRRYISNPSVTNNEMRPKFFSSEFSGKRGDGIPDYSELNRIRCTGSYNLRSTA 560
Query: 541 IFHDTFNFLAKRRR 582
+ + LAKRRR
Sbjct: 561 SLDENSDLLAKRRR 574
[160][TOP]
>UniRef100_A2Q172 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=A2Q172_MEDTR
Length = 152
Score = 213 bits (543), Expect = 7e-54
Identities = 102/125 (81%), Positives = 107/125 (85%)
Frame = +1
Query: 208 MHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSNGK 387
MHWSTDVYHASEF+YSNVHILPKTSHLWILSGKSC SDTIHFLLRKDQDQI+++SLS GK
Sbjct: 1 MHWSTDVYHASEFLYSNVHILPKTSHLWILSGKSCMSDTIHFLLRKDQDQINIESLSTGK 60
Query: 388 RNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFNFL 567
RN S L VS+D VK S KTF TKE GISNYSI NQ ICTDHSH MYPAIFHDTF L
Sbjct: 61 RNISNLLVSNDEVKLKLLSLKTFGTKEKGISNYSILNQMICTDHSHLMYPAIFHDTFYLL 120
Query: 568 AKRRR 582
AKRRR
Sbjct: 121 AKRRR 125
[161][TOP]
>UniRef100_C7J1G9 Os04g0240100 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group
RepID=C7J1G9_ORYSJ
Length = 1199
Score = 213 bits (542), Expect = 9e-54
Identities = 106/194 (54%), Positives = 137/194 (70%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L++TI+S DI+H+V +P KS +LVQNDQYV+SEQVIAEIRAGT + KE+VQK
Sbjct: 70 FLCYIDLHITIQSQDILHSVTIPSKSLILVQNDQYVESEQVIAEIRAGTSALHFKEKVQK 129
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 130 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQM 189
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S R L ++DD V+H TF K+ I +YS ++ + H +F+YP+
Sbjct: 190 NTYSFSVDGRYIFGLSMADDEVRHRLLD--TFGKKDREILDYSTPDRIMSNGHWNFVYPS 247
Query: 541 IFHDTFNFLAKRRR 582
I + F+ LAK+RR
Sbjct: 248 ILQNNFDLLAKKRR 261
[162][TOP]
>UniRef100_B8AP84 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AP84_ORYSI
Length = 976
Score = 213 bits (542), Expect = 9e-54
Identities = 106/194 (54%), Positives = 137/194 (70%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L++TI+S DI+H+V +P KS +LVQNDQYV+SEQVIAEIRAGT + KE+VQK
Sbjct: 151 FLCYIDLHITIQSQDILHSVTIPSKSLILVQNDQYVESEQVIAEIRAGTSALHFKEKVQK 210
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 211 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQM 270
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S R L ++DD V+H TF K+ I +YS ++ + H +F+YP+
Sbjct: 271 NTYSFSVDGRYIFGLSMADDEVRHRLLD--TFGKKDREILDYSTPDRIMSNGHWNFVYPS 328
Query: 541 IFHDTFNFLAKRRR 582
I + F+ LAK+RR
Sbjct: 329 ILQNNFDLLAKKRR 342
[163][TOP]
>UniRef100_P0C508 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oryza sativa
Indica Group RepID=RPOC2_ORYSI
Length = 1513
Score = 213 bits (542), Expect = 9e-54
Identities = 106/194 (54%), Positives = 137/194 (70%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L++TI+S DI+H+V +P KS +LVQNDQYV+SEQVIAEIRAGT + KE+VQK
Sbjct: 384 FLCYIDLHITIQSQDILHSVTIPSKSLILVQNDQYVESEQVIAEIRAGTSALHFKEKVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S R L ++DD V+H TF K+ I +YS ++ + H +F+YP+
Sbjct: 504 NTYSFSVDGRYIFGLSMADDEVRHRLLD--TFGKKDREILDYSTPDRIMSNGHWNFVYPS 561
Query: 541 IFHDTFNFLAKRRR 582
I + F+ LAK+RR
Sbjct: 562 ILQNNFDLLAKKRR 575
[164][TOP]
>UniRef100_P0C509 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Oryza sativa
RepID=RPOC2_ORYSJ
Length = 1513
Score = 213 bits (542), Expect = 9e-54
Identities = 106/194 (54%), Positives = 137/194 (70%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L++TI+S DI+H+V +P KS +LVQNDQYV+SEQVIAEIRAGT + KE+VQK
Sbjct: 384 FLCYIDLHITIQSQDILHSVTIPSKSLILVQNDQYVESEQVIAEIRAGTSALHFKEKVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S R L ++DD V+H TF K+ I +YS ++ + H +F+YP+
Sbjct: 504 NTYSFSVDGRYIFGLSMADDEVRHRLLD--TFGKKDREILDYSTPDRIMSNGHWNFVYPS 561
Query: 541 IFHDTFNFLAKRRR 582
I + F+ LAK+RR
Sbjct: 562 ILQNNFDLLAKKRR 575
[165][TOP]
>UniRef100_Q6ENI2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Oryza nivara
RepID=RPOC2_ORYNI
Length = 1513
Score = 213 bits (542), Expect = 9e-54
Identities = 106/194 (54%), Positives = 137/194 (70%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L++TI+S DI+H+V +P KS +LVQNDQYV+SEQVIAEIRAGT + KE+VQK
Sbjct: 384 FLCYIDLHITIQSQDILHSVTIPSKSLILVQNDQYVESEQVIAEIRAGTSALHFKEKVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S R L ++DD V+H TF K+ I +YS ++ + H +F+YP+
Sbjct: 504 NTYSFSVDGRYIFGLSMADDEVRHRLLD--TFGKKDREILDYSTPDRIMSNGHWNFVYPS 561
Query: 541 IFHDTFNFLAKRRR 582
I + F+ LAK+RR
Sbjct: 562 ILQNNFDLLAKKRR 575
[166][TOP]
>UniRef100_A9XWA7 RNA polymerase beta'' subunit (Fragment) n=1 Tax=Polygala cruciata
RepID=A9XWA7_POLCR
Length = 1070
Score = 213 bits (541), Expect = 1e-53
Identities = 112/174 (64%), Positives = 127/174 (72%), Gaps = 8/174 (4%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC IELYVTIES DIIHNV +P KS LLVQNDQYVKSEQVIAEIRAGTYTF+ K RVQK
Sbjct: 115 FLCYIELYVTIESEDIIHNVTIPQKSLLLVQNDQYVKSEQVIAEIRAGTYTFDFKYRVQK 174
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHW+T++Y SEF +SNVH+L +TSHLWILSG SC+ + F L KDQDQ
Sbjct: 175 HIYSDSEGEMHWNTEMYCVSEFTHSNVHVLSRTSHLWILSGGSCKPGAVPFSLHKDQDQT 234
Query: 361 HLDSLSNGKRNTSPLFV------SDDHVKHPFFSFKTFAT--KETGISNYSIFN 498
H S G R S L V S+D V+ FFSF + KE+GI +YS N
Sbjct: 235 HTHFPSAGGRYISNLSVSNDQVRSNDQVRRKFFSFHLYDNDKKESGIPDYSDLN 288
[167][TOP]
>UniRef100_C7BF65 DNA-directed RNA polymerase n=1 Tax=Dendrocalamus latiflorus
RepID=C7BF65_9POAL
Length = 1519
Score = 212 bits (540), Expect = 2e-53
Identities = 107/194 (55%), Positives = 138/194 (71%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L+VTI+S DI+++V +P KS +LVQNDQYV+SEQVIAEIRAGT T + KERVQK
Sbjct: 384 FLCYIDLHVTIQSQDILYSVNIPSKSLILVQNDQYVESEQVIAEIRAGTSTLHFKERVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ S S R L +++D V+H TF K+ I +YS ++ + H +F+YP+
Sbjct: 504 NIYSFSVDGRYIFDLSMANDQVRHSLLD--TFGKKDREILDYSTPDRIMSNGHWNFVYPS 561
Query: 541 IFHDTFNFLAKRRR 582
I D + LAK+RR
Sbjct: 562 ILQDNSDLLAKKRR 575
[168][TOP]
>UniRef100_A9XW61 DNA-directed RNA polymerase (Fragment) n=1 Tax=Clidemia dentata
RepID=A9XW61_9MYRT
Length = 1275
Score = 212 bits (540), Expect = 2e-53
Identities = 112/194 (57%), Positives = 138/194 (71%), Gaps = 1/194 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F+C+I LYVTIES DI+HNV +PPKSFLLVQN+QYV++EQVIAEIR YT NLKERV+K
Sbjct: 349 FICSIALYVTIESEDILHNVTIPPKSFLLVQNNQYVEAEQVIAEIREVPYTLNLKERVRK 408
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEM WS DVYHAS F YSNVH+LPKTSHLWILSG S RS + F L DQDQ+
Sbjct: 409 HIYSDSEGEMRWSNDVYHASTFTYSNVHLLPKTSHLWILSGGSWRSSAVPFSLHTDQDQM 468
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFF-SFKTFATKETGISNYSIFNQTICTDHSHFMYP 537
++ SLS + + S L V++D +++ S+ + K+ I NYS H + +Y
Sbjct: 469 NISSLSVERGSISTLSVNNDPLRYKLLRSYFSGKKKKDKIPNYSE------PVHWNLIYT 522
Query: 538 AIFHDTFNFLAKRR 579
AI H + L KRR
Sbjct: 523 AILHGNSHLLVKRR 536
[169][TOP]
>UniRef100_Q4FFY7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ranunculus
macranthus RepID=Q4FFY7_RANMC
Length = 1376
Score = 211 bits (536), Expect = 4e-53
Identities = 111/196 (56%), Positives = 136/196 (69%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L VTIE DI+HNV +PPKSF+LV+NDQYV+SEQVIAEIRA T N KERV+K
Sbjct: 382 FLCYIDLSVTIEGPDILHNVNIPPKSFILVKNDQYVESEQVIAEIRAEASTLNFKERVRK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWST VYHA E+ Y NVH+LPKTSHLWILSG RS + F L KDQDQI
Sbjct: 442 HIYSDSEGEMHWSTAVYHAPEYTYGNVHLLPKTSHLWILSGVPQRSSIVPFSLHKDQDQI 501
Query: 361 HLDSLSNGKRNTSPLFVS--DDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMY 534
++ SLS ++ S L +S +D V F + K + +YS + +C H + +Y
Sbjct: 502 NIHSLSAKQKFISNLSLSMTNDQVIKKLFRSDSSVKKGGWVLDYSGPAEVLCNGHCNLIY 561
Query: 535 PAIFHDTFNFLAKRRR 582
AI + + LAKRRR
Sbjct: 562 SAILDENSDLLAKRRR 577
[170][TOP]
>UniRef100_A1XGM8 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ranunculus
macranthus RepID=RPOC2_RANMC
Length = 1383
Score = 211 bits (536), Expect = 4e-53
Identities = 111/196 (56%), Positives = 136/196 (69%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L VTIE DI+HNV +PPKSF+LV+NDQYV+SEQVIAEIRA T N KERV+K
Sbjct: 379 FLCYIDLSVTIEGPDILHNVNIPPKSFILVKNDQYVESEQVIAEIRAEASTLNFKERVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWST VYHA E+ Y NVH+LPKTSHLWILSG RS + F L KDQDQI
Sbjct: 439 HIYSDSEGEMHWSTAVYHAPEYTYGNVHLLPKTSHLWILSGVPQRSSIVPFSLHKDQDQI 498
Query: 361 HLDSLSNGKRNTSPLFVS--DDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMY 534
++ SLS ++ S L +S +D V F + K + +YS + +C H + +Y
Sbjct: 499 NIHSLSAKQKFISNLSLSMTNDQVIKKLFRSDSSVKKGGWVLDYSGPAEVLCNGHCNLIY 558
Query: 535 PAIFHDTFNFLAKRRR 582
AI + + LAKRRR
Sbjct: 559 SAILDENSDLLAKRRR 574
[171][TOP]
>UniRef100_A9XW90 DNA-directed RNA polymerase (Fragment) n=1 Tax=Krameria lanceolata
RepID=A9XW90_9ROSI
Length = 1027
Score = 210 bits (535), Expect = 6e-53
Identities = 113/197 (57%), Positives = 136/197 (69%), Gaps = 3/197 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I LYVTIES DII NV +PPKSFLLVQNDQYV+SEQVIAEIRAGT T ++KERV+K
Sbjct: 346 FLCYINLYVTIESEDIIXNVTIPPKSFLLVQNDQYVESEQVIAEIRAGTDTLSVKERVRK 405
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHW +LPKTSHLWILSG SC S + F L KDQDQ+
Sbjct: 406 HIYSDSEGEMHWRXXXXXXXXXXXXXXXLLPKTSHLWILSGGSCXSSVVPFSLHKDQDQM 465
Query: 361 HLDSLSNGKRNTSPL-FVSDDHVKHPFFSFKTFATKETGIS--NYSIFNQTICTDHSHFM 531
+SLS +R +S L V++D V++ FFS + KE+ IS +YS + IC H + +
Sbjct: 466 SXNSLSVEERYSSRLSVVNNDQVRYQFFSSDFYGKKESSISIPDYSGLKKIICIGHCNLI 525
Query: 532 YPAIFHDTFNFLAKRRR 582
Y AI H+ + LAKRRR
Sbjct: 526 YSAIIHENSHLLAKRRR 542
[172][TOP]
>UniRef100_A9XWA6 DNA-directed RNA polymerase n=1 Tax=Plumbago auriculata
RepID=A9XWA6_PLUAU
Length = 1370
Score = 209 bits (533), Expect = 1e-52
Identities = 112/194 (57%), Positives = 139/194 (71%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+L VTIES DIIH V +PPKS LLVQN+QYV+SEQ+IAEIRAG T NLKE+V+K
Sbjct: 376 FLCHIDLDVTIESEDIIHKVNIPPKSLLLVQNNQYVESEQMIAEIRAGRATLNLKEKVRK 435
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDV H EF Y NV++LPKTSHLWIL+G+S +S L KDQDQ
Sbjct: 436 HIYSDSEGEMHWSTDVDHTPEFPYGNVYLLPKTSHLWILAGRSHKSILSSPSLHKDQDQT 495
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ LS +R + V++D+V+H FFS + E I +YS N+ + T HS+ +YPA
Sbjct: 496 NPHFLSVEQRYSLNSSVTNDYVRHKFFSSDPSSNTEDRIPDYSELNRIVGTGHSNRIYPA 555
Query: 541 IFHDTFNFLAKRRR 582
+ LAKRRR
Sbjct: 556 ---KNVDLLAKRRR 566
[173][TOP]
>UniRef100_A6MMJ7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Dioscorea
elephantipes RepID=RPOC2_DIOEL
Length = 1382
Score = 209 bits (532), Expect = 1e-52
Identities = 107/196 (54%), Positives = 137/196 (69%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I LYVT+E DIIHN+ +PPK +LVQN QYV+SEQ+IAEIRAG +T N KERV+K
Sbjct: 382 FLCSIGLYVTLEGRDIIHNLNIPPKGLILVQNGQYVESEQLIAEIRAGAFTLNFKERVRK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWST+VYHA E+ Y N+H+L KTSHLWIL+G S RS + F L KDQDQ+
Sbjct: 442 HIYSESEGEMHWSTNVYHAPEYPYGNIHLLLKTSHLWILAGASRRSSIVSFSLHKDQDQM 501
Query: 361 HLDSLSNGKR--NTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMY 534
++ S S +R L +++ VKH T K+ I YSI ++ I H + +
Sbjct: 502 NVHSFSVEERYIYIFDLSMTNHRVKHKLLD--TSGKKDREILEYSISDRIISNGHWNLIS 559
Query: 535 PAIFHDTFNFLAKRRR 582
P+I D +FLAKRRR
Sbjct: 560 PSILQDNLDFLAKRRR 575
[174][TOP]
>UniRef100_C6GJ48 DNA-directed RNA polymerase n=1 Tax=Bambusa oldhamii
RepID=C6GJ48_BAMOL
Length = 1520
Score = 208 bits (530), Expect = 2e-52
Identities = 107/195 (54%), Positives = 137/195 (70%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L+VTI+S DI+++V +P KS +LVQNDQYV+SEQVIAEIRAGT T + KERVQK
Sbjct: 384 FLCYIDLHVTIQSQDILYSVNIPSKSLILVQNDQYVESEQVIAEIRAGTSTLHFKERVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQM 503
Query: 361 HLDSLS-NGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYP 537
+ S S +G+ +DD V+H TF K+ I +YS ++ + H +F+YP
Sbjct: 504 NTYSFSVDGRYIFDLSMANDDQVRHRLLD--TFGKKDREILDYSTPDRIMSNGHWNFIYP 561
Query: 538 AIFHDTFNFLAKRRR 582
+I D + LAK+RR
Sbjct: 562 SILQDNSDLLAKKRR 576
[175][TOP]
>UniRef100_A9XWC7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Urtica urens
RepID=A9XWC7_9ROSA
Length = 1275
Score = 208 bits (530), Expect = 2e-52
Identities = 108/196 (55%), Positives = 135/196 (68%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FL ++LYVTIES DIIHNV +PPKSF+LVQNDQYV+SEQVIAEIRA TYT N KERV+K
Sbjct: 349 FLSYLDLYVTIESEDIIHNVTIPPKSFILVQNDQYVESEQVIAEIRAATYTLNFKERVRK 408
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWSTDVYHA F YSNVH+LPKTSHLWILSG S RS + F + KDQDQ+
Sbjct: 409 HIYSNSEGEMHWSTDVYHAPLFTYSNVHLLPKTSHLWILSGASYRSSVVPFSIHKDQDQM 468
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++ +S+ ++ S ++D K K+ YS FN ++ + +P
Sbjct: 469 NVHFISDKGKSISSFSGNNDQGKVKSHISVLSDKKDRSSLYYSEFNLSVDRGRCNLRFPF 528
Query: 541 IFHDTFN--FLAKRRR 582
H ++ L+KRRR
Sbjct: 529 SLHKNYDLFLLSKRRR 544
[176][TOP]
>UniRef100_A7M956 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Cuscuta reflexa
RepID=RPOC2_CUSRE
Length = 1379
Score = 208 bits (530), Expect = 2e-52
Identities = 109/201 (54%), Positives = 136/201 (67%), Gaps = 7/201 (3%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F C+I LYVTI+S DI+H+V +PPKSF+LVQNDQYV+SEQVIAE RAG T N KE+++K
Sbjct: 379 FFCSIYLYVTIQSQDILHHVKIPPKSFILVQNDQYVESEQVIAETRAGASTLNYKEKIRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS GEMHWST+VYHA EF Y NVH+L KTSHLWIL G+ C S + + +DQDQ+
Sbjct: 439 HIYSDSGGEMHWSTNVYHAPEFTYGNVHLLSKTSHLWILLGEPCHSSLVSTSIHRDQDQM 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
SLS +R TS L ++D K S E I++YS N + CTDH + +YPA
Sbjct: 499 SAQSLSVKRRYTSKLSETNDEAKQKIAS-------EDLIADYSDVNPSRCTDHYNLVYPA 551
Query: 541 IF-------HDTFNFLAKRRR 582
I + N L+KRRR
Sbjct: 552 ILPILDENSYFFSNCLSKRRR 572
[177][TOP]
>UniRef100_A9XW79 DNA-directed RNA polymerase (Fragment) n=1 Tax=Helianthemum canum
RepID=A9XW79_9ROSI
Length = 1279
Score = 207 bits (528), Expect = 4e-52
Identities = 110/194 (56%), Positives = 141/194 (72%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+L V+IES DIIH V +P KSFLLVQ DQYVKSEQVIAEIRAGT++ NLKERV+K
Sbjct: 349 FLCSIDLSVSIESEDIIHKVTIPAKSFLLVQTDQYVKSEQVIAEIRAGTHSLNLKERVRK 408
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWST VYH+ E Y+NVH+LPK SHLWIL G S + + F L KDQDQ+
Sbjct: 409 HIYSDSEGEMHWSTHVYHSPEVRYNNVHLLPKPSHLWILVGGSYKFSLVPFSLHKDQDQL 468
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
++DS S +R S L V++D+V+ FS F+ ++ G +YS + I T+ + +Y
Sbjct: 469 NVDSPSPKQRANSGLSVNNDNVRPDRFS-SDFSDQKEGRISYSC--ELIGTEQPNCIYFP 525
Query: 541 IFHDTFNFLAKRRR 582
IF + + L KRR+
Sbjct: 526 IFDENSDLLGKRRK 539
[178][TOP]
>UniRef100_B2XWN9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Fagopyrum
esculentum subsp. ancestrale RepID=RPOC2_FAGEA
Length = 1365
Score = 207 bits (528), Expect = 4e-52
Identities = 114/197 (57%), Positives = 136/197 (69%), Gaps = 3/197 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L VTIES DIIHNV +PPKSFLLVQ DQYV+SEQVIAEIRAGT T N KE+V+K
Sbjct: 383 FLCYIDLAVTIESEDIIHNVNIPPKSFLLVQKDQYVESEQVIAEIRAGTSTLNFKEKVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS+GEMHWSTDV HA EF Y NVH+LPKTSHLWIL+G+ +S L KDQDQ
Sbjct: 443 HIYSDSQGEMHWSTDVDHAPEFTYGNVHLLPKTSHLWILAGRPHKSRVATRSLHKDQDQT 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFS---FKTFATKETGISNYSIFNQTICTDHSHFM 531
+ LS +R S V + +++H FFS T + K IS+YS + + T HS+ +
Sbjct: 503 NAHFLSVEQRYISNSSVINAYMRHTFFSSDLSSTNSNKGDSISDYSERKRIVRTRHSNLI 562
Query: 532 YPAIFHDTFNFLAKRRR 582
YPA L KRRR
Sbjct: 563 YPA---KNSYLLGKRRR 576
[179][TOP]
>UniRef100_A9XW83 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hymenanthera alpina
RepID=A9XW83_9ROSI
Length = 1313
Score = 207 bits (527), Expect = 5e-52
Identities = 103/145 (71%), Positives = 116/145 (80%), Gaps = 1/145 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES +IIHNV +PPKS LLVQNDQ+V+SEQVIAEIRAG YT N ERV+K
Sbjct: 350 FLCYIDLYVTIESENIIHNVTIPPKSVLLVQNDQHVESEQVIAEIRAGAYTLNFTERVRK 409
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF Y NVH+LPKTSHLWILSG SC S + F L KDQDQ+
Sbjct: 410 HIYSDSEGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILSGGSCGSSIVPFSLHKDQDQM 469
Query: 361 HLDSLSNGKRNTSPLFVS-DDHVKH 432
+ SLS +R S LF +D V+H
Sbjct: 470 NAHSLSVERRYISSLFSELNDQVRH 494
[180][TOP]
>UniRef100_B9NFC6 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9NFC6_POPTR
Length = 286
Score = 206 bits (523), Expect = 1e-51
Identities = 107/167 (64%), Positives = 125/167 (74%)
Frame = +1
Query: 82 LLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQKHIYSDSEGEMHWSTDVYHASEFMYSNV 261
LLVQNDQYV+SEQVIAEIR+GTYT N ERV+KHIYSDSEGEMHWSTDVYHASEF YSNV
Sbjct: 1 LLVQNDQYVESEQVIAEIRSGTYTLNFTERVRKHIYSDSEGEMHWSTDVYHASEFTYSNV 60
Query: 262 HILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSNGKRNTSPLFVSDDHVKHPFF 441
H+LPKTSHLWILSG SCRS + F L KDQDQI++ SLS + S V++D VKH FF
Sbjct: 61 HLLPKTSHLWILSGGSCRSSIVSFSLHKDQDQINVHSLSVERGYISNPSVNNDKVKHKFF 120
Query: 442 SFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFNFLAKRRR 582
K++ I +YS N+ ICT F+YP I H+ + LAKRR+
Sbjct: 121 ---IKVKKKSRILDYSDLNRMICTG---FIYPTILHENSDLLAKRRK 161
[181][TOP]
>UniRef100_Q589B8 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Silene latifolia
RepID=RPOC2_SILLA
Length = 1373
Score = 206 bits (523), Expect = 1e-51
Identities = 114/196 (58%), Positives = 135/196 (68%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+LYVTIES D +HNV +PPKSFLLVQNDQYV+SEQVIAEIRAG T N KE+V+K
Sbjct: 379 FLCYIDLYVTIESEDSLHNVNIPPKSFLLVQNDQYVESEQVIAEIRAGASTLNFKEKVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA EF Y NVH+LPK S LWILSG+ RS + F L KDQDQ
Sbjct: 439 HIYSDSEGEMHWSTDVYHAPEFTYGNVHLLPKASRLWILSGRPYRSSVVSFSLHKDQDQT 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFS--FKTFATKETGISNYSIFNQTICTDHSHFMY 534
+SLS ++ L +++D V++ F K + KE NYS N H + +Y
Sbjct: 499 TGNSLS-FEQKIYNLSMTNDQVQNKFLDPYIKKSSKKEDRSPNYSELNG---MSHCNHIY 554
Query: 535 PAIFHDTFNFLAKRRR 582
PA D LAKRR+
Sbjct: 555 PAKNSD---LLAKRRK 567
[182][TOP]
>UniRef100_B5ANL6 DNA-directed RNA polymerase n=1 Tax=Chasmanthium latifolium
RepID=B5ANL6_9POAL
Length = 1512
Score = 204 bits (520), Expect = 3e-51
Identities = 105/194 (54%), Positives = 134/194 (69%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L+VTI+S DI+H+V +P KS +LVQNDQYV+SEQVIAEIRAGT T + KE+VQK
Sbjct: 384 FLCYIDLHVTIQSQDILHSVNIPLKSLILVQNDQYVESEQVIAEIRAGTSTLHFKEKVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDV HA E+ Y N+ LPKTSHLWILS C S F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVSHAPEYQYGNLRRLPKTSHLWILSVSMCGSSIASFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S R T L ++D V H TF+ K+ I +Y ++ + H +F+YP+
Sbjct: 504 NTYSFSVDGRYTFDLSTANDQVSHRLLD--TFSKKDREILDYLSPDRIVSNGHWNFVYPS 561
Query: 541 IFHDTFNFLAKRRR 582
I D + LAK+RR
Sbjct: 562 ILQDNSDLLAKKRR 575
[183][TOP]
>UniRef100_C8XU09 RNA polymerase beta'' subunit n=1 Tax=Coix lacryma-jobi
RepID=C8XU09_COILA
Length = 1520
Score = 204 bits (518), Expect = 5e-51
Identities = 104/194 (53%), Positives = 132/194 (68%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L+VTI+S DI+H+V +P KS +LVQNDQYV+SEQVIAEIRAGT T + KE+VQK
Sbjct: 384 FLCYIDLHVTIQSRDILHSVNIPLKSLILVQNDQYVESEQVIAEIRAGTSTLHFKEKVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S R +++D V H TF K+ I +Y ++ + H + YP+
Sbjct: 504 NTYSFSVDGRYIFDFSMANDQVSHRLLD--TFGKKDREILDYLTPDRIVSNGHWNCFYPS 561
Query: 541 IFHDTFNFLAKRRR 582
I D + LAK+RR
Sbjct: 562 ILQDNSDLLAKKRR 575
[184][TOP]
>UniRef100_B7T416 DNA-directed RNA polymerase n=1 Tax=Monsonia vanderietiae
RepID=B7T416_9ROSI
Length = 1392
Score = 204 bits (518), Expect = 5e-51
Identities = 112/198 (56%), Positives = 134/198 (67%), Gaps = 5/198 (2%)
Frame = +1
Query: 4 LCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQKH 183
LC I+ VTIES DIIH+V +PPKS LLVQNDQYV+SEQVIAEIRAGT ++RV+KH
Sbjct: 381 LCYIDFSVTIESEDIIHSVPIPPKSLLLVQNDQYVESEQVIAEIRAGTSPPPFQDRVRKH 440
Query: 184 IYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIH 363
IYSDSEGEMHWSTDVYHA + SNVH+LPKTSHLWIL G S F + KDQDQ+
Sbjct: 441 IYSDSEGEMHWSTDVYHAPKNPSSNVHLLPKTSHLWILVG---GSGPALFSIYKDQDQMS 497
Query: 364 LDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKE-----TGISNYSIFNQTICTDHSHF 528
+ SLS RNT L V +D ++H FFS + + I NYS N ++ T S+
Sbjct: 498 IHSLSAQGRNTPSLSVKNDQLRHKFFSLGLYGKNDGEGGRITIRNYSELNLSLLTARSNP 557
Query: 529 MYPAIFHDTFNFLAKRRR 582
YPAI + + LAKRRR
Sbjct: 558 PYPAILRENLDLLAKRRR 575
[185][TOP]
>UniRef100_Q01923 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Sorghum bicolor
RepID=RPOC2_SORBI
Length = 1520
Score = 204 bits (518), Expect = 5e-51
Identities = 104/194 (53%), Positives = 132/194 (68%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L+VTI+S DI+H+V +P KS +LVQNDQYV+SEQVIAEIRAGT T + KE+VQK
Sbjct: 384 FLCYIDLHVTIQSQDILHSVNIPLKSLILVQNDQYVESEQVIAEIRAGTSTLHFKEKVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S R +++D V H TF K+ I +Y ++ + H + YP+
Sbjct: 504 NTYSFSVDGRYIFDFSMANDQVSHRLLD--TFGKKDREILDYLTPDRIVSNGHWNCFYPS 561
Query: 541 IFHDTFNFLAKRRR 582
I D + LAK+RR
Sbjct: 562 ILQDNSDLLAKKRR 575
[186][TOP]
>UniRef100_P16025 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Zea mays
RepID=RPOC2_MAIZE
Length = 1527
Score = 203 bits (517), Expect = 7e-51
Identities = 104/194 (53%), Positives = 132/194 (68%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L+VTI+S DI+H+V +P KS +LVQNDQYV+SEQVIAEIRAGT T + KE+VQK
Sbjct: 384 FLCYIDLHVTIQSQDILHSVNIPLKSLILVQNDQYVESEQVIAEIRAGTSTLHFKEKVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S R +++D V H TF K+ I +Y ++ + H + YP+
Sbjct: 504 NTYSFSVDGRYIFDFSMANDQVSHRLLD--TFGKKDREILDYLTPDRIVFNGHWNCFYPS 561
Query: 541 IFHDTFNFLAKRRR 582
I D + LAK+RR
Sbjct: 562 ILQDNSDLLAKKRR 575
[187][TOP]
>UniRef100_Q6ENX1 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Saccharum
officinarum RepID=RPOC2_SACOF
Length = 1534
Score = 201 bits (512), Expect = 3e-50
Identities = 103/194 (53%), Positives = 131/194 (67%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L+VTI+S DI+H+V +P KS +LVQNDQYV+SEQVIAEIRAG T + KE+VQK
Sbjct: 384 FLCYIDLHVTIQSQDILHSVNIPLKSLILVQNDQYVESEQVIAEIRAGMSTLHFKEKVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S R +++D V H TF K+ I +Y ++ + H + YP+
Sbjct: 504 NTYSFSVDGRYIFDFSMANDQVSHRLLD--TFGKKDREILDYLTPDRIVSNGHWNCFYPS 561
Query: 541 IFHDTFNFLAKRRR 582
I D + LAK+RR
Sbjct: 562 ILQDNSDLLAKKRR 575
[188][TOP]
>UniRef100_Q6L3A5 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Saccharum sp.
RepID=RPOC2_SACHY
Length = 1534
Score = 201 bits (512), Expect = 3e-50
Identities = 103/194 (53%), Positives = 131/194 (67%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L+VTI+S DI+H+V +P KS +LVQNDQYV+SEQVIAEIRAG T + KE+VQK
Sbjct: 384 FLCYIDLHVTIQSQDILHSVNIPLKSLILVQNDQYVESEQVIAEIRAGMSTLHFKEKVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S S R +++D V H TF K+ I +Y ++ + H + YP+
Sbjct: 504 NTYSFSVDGRYIFDFSMANDQVSHRLLD--TFGKKDREILDYLTPDRIVSNGHWNCFYPS 561
Query: 541 IFHDTFNFLAKRRR 582
I D + LAK+RR
Sbjct: 562 ILQDNSDLLAKKRR 575
[189][TOP]
>UniRef100_A9XW82 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hua gabonii
RepID=A9XW82_9ROSI
Length = 1197
Score = 201 bits (511), Expect = 3e-50
Identities = 112/202 (55%), Positives = 140/202 (69%), Gaps = 8/202 (3%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNL--KERV 174
FLC I++ TIE+ I+HNV +P +S +LV+NDQYVKSEQVIAE+RAG FN K+RV
Sbjct: 328 FLCYIDVCATIENEGILHNVTIPSESIILVKNDQYVKSEQVIAELRAGIDIFNNNNKDRV 387
Query: 175 QKHIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQD 354
QK++YSDSEGEMHWSTD+YHA E YSNVH L KT+ LWILSG S RS I F L KDQD
Sbjct: 388 QKYVYSDSEGEMHWSTDMYHAPELKYSNVHRLKKTNLLWILSGGSRRSSVISFSLHKDQD 447
Query: 355 QIHLDSLS-NGK-RNTSPL----FVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTD 516
Q+++ SLS G+ R S L V ++ V+ FFS KE+GI + S FN+ I T
Sbjct: 448 QMNIHSLSVEGRYRYISSLSVNNVVKNNQVRRKFFSSDLPGKKESGIPDDSKFNRIIYTG 507
Query: 517 HSHFMYPAIFHDTFNFLAKRRR 582
H + +YPAI H + +AKRRR
Sbjct: 508 HCNLIYPAILHKNSDLVAKRRR 529
[190][TOP]
>UniRef100_A9XW52 DNA-directed RNA polymerase n=1 Tax=Bulnesia arborea
RepID=A9XW52_BULAR
Length = 1369
Score = 201 bits (511), Expect = 3e-50
Identities = 107/194 (55%), Positives = 132/194 (68%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F+C+I+LYVTIES DI+HNV +P KSFLLV+N+QYV+SEQVIAEIRA T +KERV+K
Sbjct: 383 FICDIDLYVTIESEDILHNVTIPSKSFLLVKNNQYVQSEQVIAEIRARTDNLIVKERVRK 442
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDSEGEMHWSTDVYHA E+ YSNVH+LPKTSHLWILSG SC+S + L KDQDQ+
Sbjct: 443 HIYSDSEGEMHWSTDVYHAPEWTYSNVHLLPKTSHLWILSGGSCKSSVLPLSLHKDQDQL 502
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
LS+GK K+T + S+FN + H+ +PA
Sbjct: 503 ----LSSGK-------------------------KKTILPYSSVFNPS--RYMGHYDFPA 531
Query: 541 IFHDTFNFLAKRRR 582
I H+ ++ L KRRR
Sbjct: 532 ILHENYDLLGKRRR 545
[191][TOP]
>UniRef100_Q3BAQ2 DNA-directed RNA polymerase subunit beta'' n=2 Tax=Phalaenopsis
aphrodite subsp. formosana RepID=RPOC2_PHAAO
Length = 1388
Score = 199 bits (506), Expect = 1e-49
Identities = 107/196 (54%), Positives = 137/196 (69%), Gaps = 2/196 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+ YVTIES DI HNV +P KS +LVQNDQYV+SEQVIAEIRA T TF+ KERVQK
Sbjct: 382 FLCFIDFYVTIESRDIRHNVNIPTKSLILVQNDQYVESEQVIAEIRAETSTFHFKERVQK 441
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDT--IHFLLRKDQD 354
HIYS+SEGEMHWSTD YH ++ YSNVH+LPKTSHLWIL+G CRS++ + F L KDQD
Sbjct: 442 HIYSESEGEMHWSTDGYHTPKYPYSNVHLLPKTSHLWILAGGLCRSNSNIVSFSLHKDQD 501
Query: 355 QIHLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMY 534
Q++ +S S ++ L +++D V+H TF K+ +YS + I H + +
Sbjct: 502 QMNANSFS--LKDLFDLSLTNDQVRHKLLD--TFGKKDRESLDYSKPYRIISKGHWNLIE 557
Query: 535 PAIFHDTFNFLAKRRR 582
P+ + N LAK+RR
Sbjct: 558 PSTYIRQENSLAKKRR 573
[192][TOP]
>UniRef100_B7T3U5 DNA-directed RNA polymerase n=1 Tax=Monsonia speciosa
RepID=B7T3U5_9ROSI
Length = 1398
Score = 199 bits (505), Expect = 2e-49
Identities = 110/198 (55%), Positives = 133/198 (67%), Gaps = 5/198 (2%)
Frame = +1
Query: 4 LCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQKH 183
LC I+ YVTIES DIIH+V +PPKS LLVQNDQYV+SEQVIAEIRAG ++RV+KH
Sbjct: 380 LCYIDFYVTIESEDIIHSVPIPPKSLLLVQNDQYVESEQVIAEIRAGASPPPFQDRVRKH 439
Query: 184 IYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIH 363
IYSDSEGEMHWSTDVYHA + SNVH+LPKTSHLWIL G S + F + KDQDQ+
Sbjct: 440 IYSDSEGEMHWSTDVYHAPKKPSSNVHLLPKTSHLWILVG---GSGSALFSIYKDQDQMS 496
Query: 364 LDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKE-----TGISNYSIFNQTICTDHSHF 528
+ SLS R T L V +D ++ FFS + + I NYS N ++ T S+
Sbjct: 497 IHSLSAQGRYTPSLSVKNDQLRQKFFSLGLYGKNDGEGGRIRIRNYSEPNLSLATARSNP 556
Query: 529 MYPAIFHDTFNFLAKRRR 582
YPAI + + LAKRRR
Sbjct: 557 PYPAILRENLDLLAKRRR 574
[193][TOP]
>UniRef100_B7T2U1 DNA-directed RNA polymerase n=1 Tax=Erodium chrysanthum
RepID=B7T2U1_9ROSI
Length = 1395
Score = 196 bits (498), Expect = 1e-48
Identities = 104/197 (52%), Positives = 134/197 (68%), Gaps = 3/197 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+ VTIES D+IH+V +PPKS LLVQN++YVKSEQVIAE+RAG TF LK+RV+K
Sbjct: 379 FLCSIDFDVTIESEDLIHSVPIPPKSLLLVQNNEYVKSEQVIAEMRAGKSTFPLKDRVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWST+VYHA E YSNVH LP+T HLWIL G S F + +DQDQ+
Sbjct: 439 HIYSNSEGEMHWSTNVYHAPELPYSNVHRLPRTGHLWILLGNLGGSAPTPFSIYQDQDQM 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETG---ISNYSIFNQTICTDHSHFM 531
+DSLS R+ + V + ++H F F K I N S NQ++ T S+
Sbjct: 499 SIDSLSAQGRDRTRPSVKKEPLRHQFHPFGLDGKKRGDTFPIRNSSELNQSLLTVPSNLP 558
Query: 532 YPAIFHDTFNFLAKRRR 582
YP I + ++ +AK+RR
Sbjct: 559 YPPILRENWDLVAKKRR 575
[194][TOP]
>UniRef100_Q9XPS9 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Triticum
aestivum RepID=RPOC2_WHEAT
Length = 1479
Score = 196 bits (498), Expect = 1e-48
Identities = 101/194 (52%), Positives = 127/194 (65%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L+VTI+S DI+++V +P KS +LVQNDQYVKSEQVIAEIRAGT T + KERVQK
Sbjct: 384 FLCYIDLHVTIQSQDILYSVNIPSKSLILVQNDQYVKSEQVIAEIRAGTSTLHFKERVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ T+ K+ I +YS ++ + H +F+YP+
Sbjct: 504 N-----------------------------TYGKKDREILDYSTSDRIMSNGHWNFIYPS 534
Query: 541 IFHDTFNFLAKRRR 582
IF D + LAK+RR
Sbjct: 535 IFQDNSDLLAKKRR 548
[195][TOP]
>UniRef100_A1EA00 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Agrostis
stolonifera RepID=RPOC2_AGRST
Length = 1466
Score = 196 bits (497), Expect = 1e-48
Identities = 100/194 (51%), Positives = 127/194 (65%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L+VTI+S DI+++V +P KS +LVQNDQYVKSEQVIAEIR+GT T + KERVQK
Sbjct: 384 FLCYIDLHVTIQSQDILYSVSIPSKSLILVQNDQYVKSEQVIAEIRSGTSTLHFKERVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILSG CRS F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSGNICRSSIASFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ T+ K+ I +YS ++ + H + +YP+
Sbjct: 504 N-----------------------------TYGKKDREIFDYSRSDRIMANGHWNLIYPS 534
Query: 541 IFHDTFNFLAKRRR 582
IF D + LAK+RR
Sbjct: 535 IFQDNSDLLAKKRR 548
[196][TOP]
>UniRef100_B8Y2W6 DNA-directed RNA polymerase n=1 Tax=Festuca arundinacea
RepID=B8Y2W6_FESAR
Length = 1504
Score = 194 bits (492), Expect = 6e-48
Identities = 102/195 (52%), Positives = 132/195 (67%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNI-ELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQ 177
FLC I L+VTI+S DI+H+V +P KS +LVQNDQYV+SEQVIAEIRAGT + KE++Q
Sbjct: 384 FLCYIVNLHVTIQSQDILHSVNIPLKSLILVQNDQYVESEQVIAEIRAGTSILHFKEKIQ 443
Query: 178 KHIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQ 357
KHIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS C S F L KDQDQ
Sbjct: 444 KHIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCGSSIASFSLHKDQDQ 503
Query: 358 IHLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYP 537
++ S S R L +++D V S +TF K+ I +Y ++ + H + +YP
Sbjct: 504 MNTYSFSVHGRYIFDLSMANDQV-----SLETFGKKDREILDYLTPDRIVSNGHWNLVYP 558
Query: 538 AIFHDTFNFLAKRRR 582
+I D + LAK+RR
Sbjct: 559 SILQDNSDLLAKKRR 573
[197][TOP]
>UniRef100_A1E9I3 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Hordeum vulgare
RepID=RPOC2_HORVU
Length = 1477
Score = 194 bits (492), Expect = 6e-48
Identities = 100/194 (51%), Positives = 126/194 (64%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L+VTI+S DI+++V +P KS +LVQNDQYVKSEQVIAEIRAGT T + KERVQK
Sbjct: 384 FLCYIDLHVTIQSQDILYSVNIPSKSLILVQNDQYVKSEQVIAEIRAGTSTLHFKERVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSMCRSSIASFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ T+ K+ I +YS ++ + H + +YP+
Sbjct: 504 N-----------------------------TYGKKDREILDYSTSDRIMSNGHWNLIYPS 534
Query: 541 IFHDTFNFLAKRRR 582
IF D + LAK+RR
Sbjct: 535 IFQDNSDLLAKKRR 548
[198][TOP]
>UniRef100_A8Y9G2 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Lolium perenne
RepID=RPOC2_LOLPR
Length = 1466
Score = 190 bits (482), Expect = 8e-47
Identities = 99/194 (51%), Positives = 125/194 (64%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC I+L+VTI+S DI+++V +P KS +LVQNDQYVKSEQVIAEIRAGT T + KERVQK
Sbjct: 384 FLCYIDLHVTIQSQDILYSVNIPSKSLILVQNDQYVKSEQVIAEIRAGTPTLHFKERVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+S+GEMHWSTDVYHA E+ Y N+ LPKTSHLWILS CRS F L KDQDQ+
Sbjct: 444 HIYSESDGEMHWSTDVYHAPEYQYGNLRRLPKTSHLWILSVSRCRSSIASFSLHKDQDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ T+ K+ I +YS + + H + +YP+
Sbjct: 504 N-----------------------------TYGKKDREIFDYSTLVRIMPNGHWNLIYPS 534
Query: 541 IFHDTFNFLAKRRR 582
IF + + LAK+RR
Sbjct: 535 IFKENSDLLAKKRR 548
[199][TOP]
>UniRef100_B7T486 DNA-directed RNA polymerase n=1 Tax=Pelargonium cotyledonis
RepID=B7T486_9ROSI
Length = 1363
Score = 187 bits (475), Expect = 5e-46
Identities = 102/194 (52%), Positives = 121/194 (62%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC +TIES DII +V +PP SFLL+QNDQYV+SEQVIAEI AGT TF+LK+RV+K
Sbjct: 379 FLCYRGFSLTIESEDIIQSVPIPPNSFLLIQNDQYVESEQVIAEICAGTSTFDLKDRVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYSDS GEMHWSTDVYH EF SNVHILPKTSHLWIL G C S + F + KDQDQ+
Sbjct: 439 HIYSDSSGEMHWSTDVYHKLEFPKSNVHILPKTSHLWILLGDLCGSRPVRFSMYKDQDQM 498
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
SLS R T L V+ + +++ T + +YPA
Sbjct: 499 STHSLSVQGRYTPSLSVNSE------------------------LTRSLSTARCNLLYPA 534
Query: 541 IFHDTFNFLAKRRR 582
I H+ LAK RR
Sbjct: 535 ILHENLYLLAKNRR 548
[200][TOP]
>UniRef100_A9QBU4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Passiflora biflora
RepID=A9QBU4_PASBI
Length = 539
Score = 181 bits (458), Expect = 5e-44
Identities = 92/151 (60%), Positives = 110/151 (72%), Gaps = 3/151 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC+I+LYVTIES DI+HNV +P KS LLVQN+QYV+SEQVIAE+ GT FN R++K
Sbjct: 381 FLCSIDLYVTIESEDILHNVTIPSKSILLVQNNQYVQSEQVIAEVHGGTSPFNFTNRIRK 440
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
++Y SEGEMHWST VYH SE YSNVH L KTSHLWILSG S S T+ F L KDQDQ+
Sbjct: 441 YVYCHSEGEMHWSTGVYHTSESRYSNVHCLTKTSHLWILSGGSGSSSTVPFSLHKDQDQM 500
Query: 361 HLDSLSNGKRNTSPLFV---SDDHVKHPFFS 444
+ SLS KR S V ++D V++ FS
Sbjct: 501 NTHSLSVEKRYISNFSVNSENNDQVQYKLFS 531
[201][TOP]
>UniRef100_C7SM29 RNA polymerase beta' subunit (Fragment) n=1 Tax=Joinvillea plicata
RepID=C7SM29_9POAL
Length = 1382
Score = 177 bits (450), Expect = 4e-43
Identities = 96/194 (49%), Positives = 121/194 (62%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
FLC +LYVTIES DI+HNV +P KS +LVQNDQYV+SEQVIAEIRAGTYTF+ KERVQK
Sbjct: 384 FLCYRDLYVTIESQDILHNVNIPSKSLILVQNDQYVESEQVIAEIRAGTYTFHFKERVQK 443
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+SEGEMHWS HA E + V P T H I +G L DQ+
Sbjct: 444 HIYSESEGEMHWSPXXXHAPEXQWGXVRRSPNTXHXXIFAGXLRXXSXXSXSLHXXXDQM 503
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ S R S L +++D V+H TF K+ I +YS ++ I H +F+YP+
Sbjct: 504 NTYSFCVDGRYISALSMANDQVRHKLLD--TFGKKDREILDYSRPDRIISNGHWNFVYPS 561
Query: 541 IFHDTFNFLAKRRR 582
I + +FLAK+RR
Sbjct: 562 ILQENSDFLAKKRR 575
[202][TOP]
>UniRef100_B5LMM6 DNA-directed RNA polymerase n=1 Tax=Cicer arietinum
RepID=B5LMM6_CICAR
Length = 1376
Score = 160 bits (406), Expect = 5e-38
Identities = 98/211 (46%), Positives = 127/211 (60%), Gaps = 17/211 (8%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F+CNI LYVTIES DIIHN+I+P KSFLLVQNDQY+KSEQVIAEIRAGTYTFNLK+R +
Sbjct: 380 FICNINLYVTIESDDIIHNMIIPSKSFLLVQNDQYIKSEQVIAEIRAGTYTFNLKKRFEN 439
Query: 181 HIYSDSEGE--------MHWS----TDVYHASEFMY-----SNVHILPKTSHLWILSGKS 309
+G+ MH + +++ + +Y S ++ ++ +
Sbjct: 440 IFILTQKGKCIGVPMCTMHPNFCIVMYIFYQKQVIYGYYQESRAGLI---QSIFYFARIK 496
Query: 310 CRSDTIHFLLRKDQDQIHLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYS 489
+ I FLL+K + + S G VKH FSF+TF TKE GI++YS
Sbjct: 497 IKLTVILFLLKKKR----FLTFSQGM----------IQVKHKLFSFETFGTKERGITDYS 542
Query: 490 IFNQTICTDHSHFMYPAIFHDTFNFLAKRRR 582
IFNQ ICTD+SH MY AIF++ F LAKRRR
Sbjct: 543 IFNQIICTDYSHLMYSAIFNNIFYLLAKRRR 573
[203][TOP]
>UniRef100_Q4FFY9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba
RepID=Q4FFY9_GINBI
Length = 1375
Score = 160 bits (405), Expect = 7e-38
Identities = 87/193 (45%), Positives = 121/193 (62%)
Frame = +1
Query: 4 LCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQKH 183
+C+ EL +TI+ D +H++ +P +S LLVQNDQYV+SEQVIAE RA T KE+V KH
Sbjct: 388 ICHNELSITIDGQDQVHSLTIPSQSLLLVQNDQYVESEQVIAEARARTSPS--KEKVMKH 445
Query: 184 IYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIH 363
IYSD EGEMHWST+V HA E ++ NVH++ +TS+LW+LSG S + F L KDQDQ++
Sbjct: 446 IYSDLEGEMHWSTNVCHAPENVHGNVHLILRTSYLWVLSGGLYESGVVPFPLYKDQDQVN 505
Query: 364 LDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAI 543
+ ++ S V+ D VKH F+ KE IS YS ++ + +H +Y I
Sbjct: 506 IQFPLAKHKSLSDSSVNQDRVKHKSVD-SNFSGKEEKISGYSGIDRIMSNEHWDSIYSTI 564
Query: 544 FHDTFNFLAKRRR 582
D L K++R
Sbjct: 565 PFDNCKILGKKQR 577
[204][TOP]
>UniRef100_A9QB53 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cycas micronesica
RepID=A9QB53_9SPER
Length = 1351
Score = 159 bits (403), Expect = 1e-37
Identities = 85/195 (43%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F+C+ L +T++ D +H++ + P+S LLVQN+QYV+SEQ+IAE+ A T KE+V+K
Sbjct: 381 FMCHNNLSITLDGQDQVHDLTISPQSLLLVQNNQYVESEQIIAEVHARTSPS--KEKVRK 438
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+ EGEMHWST+V HA E++ NVH++ +TSHLW+LSG S + F KDQDQ+
Sbjct: 439 HIYSNLEGEMHWSTNVCHAPEYVQGNVHLILRTSHLWVLSGGIHGSSAVSFPFHKDQDQV 498
Query: 361 HLDSLSNGKRNTSPLF-VSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYP 537
++ L K P + V+ D +KH F KE IS+YS ++ I +H +Y
Sbjct: 499 NV-QLPLAKHELLPDYSVNQDRMKHKSVD-SNFYGKEEQISSYSEIDRVISNEHWDSIYS 556
Query: 538 AIFHDTFNFLAKRRR 582
I D FN K++R
Sbjct: 557 TISSDNFNISGKKQR 571
[205][TOP]
>UniRef100_A6H5F7 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Cycas
taitungensis RepID=RPOC2_CYCTA
Length = 1339
Score = 159 bits (403), Expect = 1e-37
Identities = 85/195 (43%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
F+C+ L +T++ D +H++ + P+S LLVQN+QYV+SEQ+IAE+ A T KE+V+K
Sbjct: 387 FMCHNNLSITLDGQDQVHDLTISPQSLLLVQNNQYVESEQIIAEVHARTSPS--KEKVRK 444
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
HIYS+ EGEMHWST+V HA E++ NVH++ +TSHLW+LSG S + F KDQDQ+
Sbjct: 445 HIYSNLEGEMHWSTNVCHAPEYVQGNVHLILRTSHLWVLSGGIHGSSAVSFPFHKDQDQV 504
Query: 361 HLDSLSNGKRNTSPLF-VSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYP 537
++ L K P + V+ D +KH F KE IS+YS ++ I +H +Y
Sbjct: 505 NV-QLPLAKHELLPDYSVNQDRMKHKSVD-SNFYGKEEQISSYSEIDRVISNEHWDSIYS 562
Query: 538 AIFHDTFNFLAKRRR 582
I D FN K++R
Sbjct: 563 TISSDNFNISGKKQR 577
[206][TOP]
>UniRef100_A1XK93 RNA polymerase beta chain (Fragment) n=1 Tax=Staphylea trifolia
RepID=A1XK93_STATR
Length = 866
Score = 157 bits (396), Expect = 8e-37
Identities = 73/127 (57%), Positives = 91/127 (71%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA EF YSNVH+LPKTSHLWILSG SCRS + F L KDQDQ++L S+S
Sbjct: 1 GEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSCRSSVVPFALHKDQDQMYLHSVSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R +S L ++D V+H F + + K+ IS YS N+ IC H +F+YPAI H+ +
Sbjct: 61 ERRESSSLSANNDQVRHKFLNSDPYGKKKVRISGYSELNRIICIGHCNFIYPAILHENSD 120
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 121 LLAKRRR 127
[207][TOP]
>UniRef100_A1XK46 RNA polymerase beta chain (Fragment) n=1 Tax=Cercis canadensis
RepID=A1XK46_CERCN
Length = 864
Score = 153 bits (387), Expect = 8e-36
Identities = 76/125 (60%), Positives = 88/125 (70%)
Frame = +1
Query: 208 MHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSNGK 387
MHWSTDVYHA EF YSNVHILPKTSHLWILSG SCRS + F L KDQDQ+++ SLS G
Sbjct: 1 MHWSTDVYHAPEFTYSNVHILPKTSHLWILSGGSCRSGAVPFSLHKDQDQMNIHSLSAGG 60
Query: 388 RNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFNFL 567
R S L VS+D V+H FFS + KE I +YS N+ IC +F+Y AI HD + L
Sbjct: 61 RYISNLLVSNDQVRHKFFSSNSSGKKERRIPDYSGLNRIICMGRCNFIYAAILHDNSDLL 120
Query: 568 AKRRR 582
AKRRR
Sbjct: 121 AKRRR 125
[208][TOP]
>UniRef100_C3W1R8 DNA-directed RNA polymerase n=1 Tax=Larix occidentalis
RepID=C3W1R8_LAROX
Length = 1222
Score = 149 bits (377), Expect = 1e-34
Identities = 81/193 (41%), Positives = 119/193 (61%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
+LC+ L +TI+ D + N+ +PP+S LLVQNDQYV+SEQ+IAE+RA T +F KE+V+K
Sbjct: 396 YLCHNNLSITIDGQDQVQNLTIPPQSLLLVQNDQYVESEQIIAEVRARTSSF--KEKVRK 453
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSD EGEMHWST+V HA E+++ NVH + +T +LWILSG S + F K QDQ+
Sbjct: 454 NIYSDLEGEMHWSTNVCHAPEYVHGNVHPILRTGYLWILSGGIYGSSVVPFPFHKHQDQV 513
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ ++ S +V D V+H + KE I +YS ++TI +H +Y
Sbjct: 514 DVQPFVAKHQSLSDSYV--DQVEHR-SGYSNCYGKEEQIFSYSETDRTISNEHRDSIYVT 570
Query: 541 IFHDTFNFLAKRR 579
+N K++
Sbjct: 571 FSPRNYNIKGKKQ 583
[209][TOP]
>UniRef100_A1XK98 RNA polymerase beta chain (Fragment) n=1 Tax=Hamamelis mollis
RepID=A1XK98_HAMMO
Length = 863
Score = 149 bits (375), Expect = 2e-34
Identities = 74/127 (58%), Positives = 88/127 (69%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA EF Y NVH+LPKTSHLWILSG SCRS + F L KDQDQ+ + SLS
Sbjct: 1 GEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILSGGSCRSSGVPFSLHKDQDQMSVHSLSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S L V++D V+H FFS KE I +YS N+ ICT H + +YPAI + +
Sbjct: 61 ERRYISNLSVTNDQVRHKFFSSDLSGKKEGRIPDYSELNRIICTGHCNPIYPAILRENSD 120
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 121 LLAKRRR 127
[210][TOP]
>UniRef100_B7ZIN6 DNA-directed RNA polymerase n=1 Tax=Keteleeria davidiana
RepID=B7ZIN6_KETDA
Length = 1222
Score = 148 bits (374), Expect = 3e-34
Identities = 80/193 (41%), Positives = 119/193 (61%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
+LC+ L +TI+ D + N+ +PP+S LLVQNDQYV+SEQ+IAE+RA T +F KE+V+K
Sbjct: 396 YLCHNNLSITIDGKDQVQNLTIPPQSLLLVQNDQYVESEQIIAEVRARTSSF--KEKVRK 453
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSD EGEMHWST+V HA E+++ NVH + +T +LWILSG S + F K QDQ+
Sbjct: 454 NIYSDLEGEMHWSTNVCHAPEYVHGNVHSILRTGYLWILSGGIYGSGVVPFPFNKHQDQV 513
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ ++ S +V D ++H + KE I +YS ++TI +H +Y
Sbjct: 514 DVQLFVAKHQSLSDSYV--DQMEHRSGDSNCYG-KEEKIFSYSETDRTISNEHQDSIYVT 570
Query: 541 IFHDTFNFLAKRR 579
+N K++
Sbjct: 571 FSPKNYNIKGKKQ 583
[211][TOP]
>UniRef100_A1XK23 RNA polymerase beta chain (Fragment) n=1 Tax=Euptelea polyandra
RepID=A1XK23_9MAGN
Length = 796
Score = 148 bits (374), Expect = 3e-34
Identities = 70/127 (55%), Positives = 90/127 (70%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG CRS + F L KDQDQ+++ SLS
Sbjct: 1 GEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGGPCRSSIVPFSLHKDQDQMNVHSLSA 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S L V++D +H FS + K+ G+ +YSI ++ IC H +F+YPA H+ +
Sbjct: 61 DRRYISNLPVTNDKARHKLFSSDSSGKKKGGVLDYSIPDRIICNGHCNFIYPASLHENSD 120
Query: 562 FLAKRRR 582
FLAKRRR
Sbjct: 121 FLAKRRR 127
[212][TOP]
>UniRef100_A1XK08 RNA polymerase beta chain (Fragment) n=1 Tax=Gunnera monoica
RepID=A1XK08_9MAGN
Length = 866
Score = 148 bits (373), Expect = 3e-34
Identities = 69/127 (54%), Positives = 87/127 (68%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYH E+ Y NVH+LPKTSHLWILSG CRS + F L KDQDQ+++ +LS
Sbjct: 1 GEMHWSTDVYHVPEYTYGNVHLLPKTSHLWILSGGPCRSSGVSFSLHKDQDQMNVHALSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S +++ V+H FS + KE I +YS N+ ICT H +F+YPAI H+ F
Sbjct: 61 EQRYISNFSATNNQVRHKLFSSDLYGKKEGSIPDYSELNRIICTGHCNFIYPAILHENFY 120
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 121 LLAKRRR 127
[213][TOP]
>UniRef100_A6YAK0 RNA polymerase beta' subunit (Fragment) n=1 Tax=Cercidiphyllum
japonicum RepID=A6YAK0_CERJA
Length = 798
Score = 147 bits (372), Expect = 5e-34
Identities = 72/124 (58%), Positives = 85/124 (68%)
Frame = +1
Query: 211 HWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSNGKR 390
HWSTDVYHA EF Y NVH+LPKTSHLWILSG SCRS + F L KDQDQ+ + SLS +R
Sbjct: 1 HWSTDVYHAPEFTYGNVHLLPKTSHLWILSGGSCRSSVVPFSLHKDQDQMSVHSLSVERR 60
Query: 391 NTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFNFLA 570
S L V++D V+H FS KE GI NYS N+ ICT H + +YPAI + + LA
Sbjct: 61 YISNLSVTNDQVRHKLFSSDLSGKKEGGIPNYSELNRIICTGHCNLIYPAILRENSDLLA 120
Query: 571 KRRR 582
KRRR
Sbjct: 121 KRRR 124
[214][TOP]
>UniRef100_A1XK13 RNA polymerase beta chain (Fragment) n=1 Tax=Meliosma squamulata
RepID=A1XK13_9MAGN
Length = 861
Score = 145 bits (366), Expect = 2e-33
Identities = 72/127 (56%), Positives = 86/127 (67%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG CRS F L KDQDQI+L SLS
Sbjct: 1 GEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGGPCRSSIAPFSLHKDQDQINLHSLSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R+ S L V++D V+H FS K I +YS ++ IC DH +F YPA H+ +
Sbjct: 61 ERRSISNLSVTNDQVRHKLFSSDLSGKKRGRILDYSGPDRIICNDHCNFRYPATLHENSD 120
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 121 LLAKRRR 127
[215][TOP]
>UniRef100_A6YAK7 RNA polymerase beta' subunit (Fragment) n=1 Tax=Hamamelis japonica
RepID=A6YAK7_HAMJA
Length = 860
Score = 142 bits (359), Expect = 1e-32
Identities = 71/124 (57%), Positives = 85/124 (68%)
Frame = +1
Query: 211 HWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSNGKR 390
HWSTDVYHA EF Y NVH+LPKTSHLWILSG SCRS + F L KDQDQ+ + SLS +R
Sbjct: 1 HWSTDVYHAPEFTYGNVHLLPKTSHLWILSGGSCRSSGVPFSLHKDQDQMSVHSLSVERR 60
Query: 391 NTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFNFLA 570
S L V++D V+H FFS KE I +YS N+ ICT H + +YPAI + + LA
Sbjct: 61 YISNLSVTNDQVRHKFFSSDLSGKKEGRIPDYSELNRIICTGHCNPIYPAILRENSDLLA 120
Query: 571 KRRR 582
KRRR
Sbjct: 121 KRRR 124
[216][TOP]
>UniRef100_A1XK42 RNA polymerase beta chain (Fragment) n=1 Tax=Magnolia tripetala
RepID=A1XK42_MAGTR
Length = 859
Score = 142 bits (359), Expect = 1e-32
Identities = 70/127 (55%), Positives = 88/127 (69%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG CRS + F L KDQDQ+++ SLS
Sbjct: 1 GEMHWSTDVYHAPEYRYGNVHLLPKTSHLWILSGGPCRSSIVTFSLHKDQDQMNVHSLSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S L V++D V+H FS + K GI +YS ++ I H +F+YPAI H+ +
Sbjct: 61 ERRYISDLSVTNDRVRHKLFSSDPSSKKGKGILDYSGPDRIISNGHWNFLYPAILHENSD 120
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 121 LLAKRRR 127
[217][TOP]
>UniRef100_A6YAJ8 RNA polymerase beta' subunit (Fragment) n=1 Tax=Altingia excelsa
RepID=A6YAJ8_9MAGN
Length = 840
Score = 142 bits (357), Expect = 2e-32
Identities = 69/124 (55%), Positives = 85/124 (68%)
Frame = +1
Query: 211 HWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSNGKR 390
HWSTDVYHA EF Y NVH+LPKTSHLWILSG SCRS + F L KDQDQ+++ SLS +R
Sbjct: 1 HWSTDVYHAPEFTYGNVHLLPKTSHLWILSGGSCRSSVVPFSLHKDQDQMNVHSLSVERR 60
Query: 391 NTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFNFLA 570
S L V++D V+H FS KE I +YS N+ IC+ H + +YPAI + + LA
Sbjct: 61 YISNLSVTNDQVRHKLFSSDISGKKEGRIPDYSELNRIICSGHCNLIYPAILRENSDLLA 120
Query: 571 KRRR 582
KRRR
Sbjct: 121 KRRR 124
[218][TOP]
>UniRef100_A1XKD0 RNA polymerase beta chain (Fragment) n=1 Tax=Oxalis sp. Qiu 94028
RepID=A1XKD0_9ROSI
Length = 827
Score = 142 bits (357), Expect = 2e-32
Identities = 67/127 (52%), Positives = 88/127 (69%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA EF YSNVH+LPKTSHLWIL+G S R+ + F L KDQDQ+++ S S
Sbjct: 1 GEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILTGASGRASGVPFSLHKDQDQMNVHSSSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S L +++D V+H FFS F KE+ I +YS N+ +C H + + PA+ H+
Sbjct: 61 ERRCNSRLSINNDQVRHKFFSSNLFGKKESRIPHYSELNRVLCIGHCNLIDPALLHENSY 120
Query: 562 FLAKRRR 582
+AKRRR
Sbjct: 121 LMAKRRR 127
[219][TOP]
>UniRef100_A1XK18 RNA polymerase beta chain (Fragment) n=1 Tax=Sargentodoxa cuneata
RepID=A1XK18_9MAGN
Length = 861
Score = 142 bits (357), Expect = 2e-32
Identities = 68/127 (53%), Positives = 87/127 (68%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA+E+ Y NVH+LPKTSHLWILSG RS + FLL KDQDQ++++SLS
Sbjct: 1 GEMHWSTDVYHATEYTYGNVHLLPKTSHLWILSGNPYRSSIVPFLLHKDQDQMNVNSLSP 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S V++D V+H F K GI +YS+ ++ IC H +F YPAI H+
Sbjct: 61 ERRYISNPSVTNDQVRHKLFRSDPSGKKGKGILDYSVPDRIICNGHCNFTYPAILHENSA 120
Query: 562 FLAKRRR 582
+AKRRR
Sbjct: 121 LVAKRRR 127
[220][TOP]
>UniRef100_A6YAL6 RNA polymerase beta' subunit (Fragment) n=1 Tax=Pterostemon
rotundifolius RepID=A6YAL6_9MAGN
Length = 811
Score = 140 bits (354), Expect = 6e-32
Identities = 67/123 (54%), Positives = 88/123 (71%)
Frame = +1
Query: 214 WSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSNGKRN 393
WSTDVYHA EF Y NVH+LPKTSHLWILSG SCRS+ + F L KDQDQ+++ SLS +++
Sbjct: 1 WSTDVYHAPEFTYGNVHLLPKTSHLWILSGGSCRSNLVPFWLHKDQDQLNIHSLSVERKH 60
Query: 394 TSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFNFLAK 573
S L +++D V+H FS K I +YS N+ ICTDH + +YPAI H+ ++ L+K
Sbjct: 61 LSNLSMTNDQVRHKLFSSDRSGKK---IPDYSELNRIICTDHCNLIYPAILHENYDLLSK 117
Query: 574 RRR 582
RRR
Sbjct: 118 RRR 120
[221][TOP]
>UniRef100_A1XK10 RNA polymerase beta chain (Fragment) n=1 Tax=Buxus sempervirens
RepID=A1XK10_BUXSE
Length = 865
Score = 140 bits (352), Expect = 9e-32
Identities = 67/127 (52%), Positives = 85/127 (66%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA E+ Y NVH+LPKTSHLW+LSG CRS + F L KDQDQ+++ SLS
Sbjct: 1 GEMHWSTDVYHAPEYTYGNVHLLPKTSHLWVLSGGPCRSRIVPFSLHKDQDQMNVHSLSA 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S L ++D V+H FS + I +YS N+ IC H +F+YP I H+ +
Sbjct: 61 ERRYISNLSATNDQVRHKLFSSDPSGKRGGSILDYSGPNRIICNGHLNFIYPTILHENSD 120
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 121 LLAKRRR 127
[222][TOP]
>UniRef100_P41606 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Pinus thunbergii
RepID=RPOC2_PINTH
Length = 1224
Score = 140 bits (352), Expect = 9e-32
Identities = 81/195 (41%), Positives = 120/195 (61%), Gaps = 2/195 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
+LC+ L +TI+ D + N+ +PP+S LLVQNDQYV+SEQ+IAE+RA T +F KE+V+K
Sbjct: 396 YLCHNNLSITIDGQDQVQNLTIPPQSLLLVQNDQYVESEQLIAEVRARTSSF--KEKVRK 453
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSD EGEMHWST+V HA E++ NVH + +T +LWILSG S + F K QDQ+
Sbjct: 454 NIYSDLEGEMHWSTNVCHAPEYVQGNVHPILRTGYLWILSGGIYGSRVVPFPFHKYQDQV 513
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYS--IFNQTICTDHSHFMY 534
++ ++ S +V D V+H + KE I +YS ++TI H +Y
Sbjct: 514 YVQPFVAKHQSLSDSYV--DQVEHRSGDSNCY-EKEEQIFSYSETETDRTISNKHRDSIY 570
Query: 535 PAIFHDTFNFLAKRR 579
+ + +N K++
Sbjct: 571 -VFYPNNYNIKGKKQ 584
[223][TOP]
>UniRef100_C1IXE7 DNA-directed RNA polymerase n=1 Tax=Picea sitchensis
RepID=C1IXE7_PICSI
Length = 1218
Score = 138 bits (347), Expect = 4e-31
Identities = 77/193 (39%), Positives = 113/193 (58%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
+LC+ L +TI D + N+ +PP+S LLVQNDQYV+SEQ+IAE+RA T +F KE+V+K
Sbjct: 396 YLCHNNLSITIHGQDQVKNLTIPPQSLLLVQNDQYVESEQIIAEVRARTSSF--KEKVRK 453
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSD EGEMHWST +++ NVH + +T +LWILSG S + F K QDQ+
Sbjct: 454 NIYSDLEGEMHWSTXXXXXXXYVHGNVHPILRTGYLWILSGGIYGSGVVPFPFHKHQDQV 513
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPA 540
+ ++ +V D V+H + KE I +YS ++TI +H +Y
Sbjct: 514 DVQPFVAKHQSLFDSYV--DQVEHRSGDSNCYG-KEEQIFSYSETDRTISNEHRDSIYVT 570
Query: 541 IFHDTFNFLAKRR 579
+ +N KR+
Sbjct: 571 LSPKNYNMKGKRQ 583
[224][TOP]
>UniRef100_A1XK09 RNA polymerase beta chain (Fragment) n=1 Tax=Pachysandra procumbens
RepID=A1XK09_PACPR
Length = 866
Score = 138 bits (347), Expect = 4e-31
Identities = 68/127 (53%), Positives = 84/127 (66%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA E+ Y NVH+LPKTSHLW+LSG CRS + F L KDQDQ++ SLS
Sbjct: 1 GEMHWSTDVYHAPEYTYGNVHLLPKTSHLWVLSGGPCRSRIVPFSLHKDQDQMNGHSLSA 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S L ++D V+H FS K I +YS N+ IC H +F+YP I H+ +
Sbjct: 61 ERRYISNLSATNDQVRHKLFSSDPSDKKGGRILDYSGPNRIICNSHLNFIYPTILHENSD 120
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 121 LLAKRRR 127
[225][TOP]
>UniRef100_A1XK99 RNA polymerase beta chain (Fragment) n=1 Tax=Sterculia balanghas
RepID=A1XK99_9ROSI
Length = 869
Score = 137 bits (346), Expect = 5e-31
Identities = 70/127 (55%), Positives = 85/127 (66%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYH+ EF YSNVH+LPKTSHLWILSG S + + F L KDQDQI++ LS
Sbjct: 1 GEMHWSTDVYHSPEFTYSNVHLLPKTSHLWILSGGSYKFSVVPFSLHKDQDQINIYYLSA 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S V++D V+H FS KE IS YS F++ I T H F+Y AI H+ +
Sbjct: 61 ERRYISRFSVNNDQVRHKLFSSDFLDKKEDRISYYSEFHRIIGTGHCDFIYSAILHENAD 120
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 121 LLAKRRR 127
[226][TOP]
>UniRef100_Q85X62 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Pinus koraiensis
RepID=RPOC2_PINKO
Length = 1209
Score = 137 bits (346), Expect = 5e-31
Identities = 80/195 (41%), Positives = 117/195 (60%), Gaps = 2/195 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
+LC+ L +TI+ + + N+ +PP+S LLVQNDQYV+SEQ+IAE+RA T +F KE+V+K
Sbjct: 396 YLCHNNLSITIDGQNQVQNLTIPPQSLLLVQNDQYVESEQIIAEVRARTSSF--KEKVRK 453
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSD EGEMHWST+V HA E+++ NVH + +T +LWILSG S + F K QDQ+
Sbjct: 454 NIYSDLEGEMHWSTNVCHAPEYVHGNVHSILRTGYLWILSGGIYGSGVVPFPFHKYQDQV 513
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYS--IFNQTICTDHSHFMY 534
+ K S + D V+H + KE I +YS ++TI +H +Y
Sbjct: 514 DVQPFV-AKHTDSYV----DQVEHRSGDSNCYG-KEEQIFSYSETETDRTISNEHRDSIY 567
Query: 535 PAIFHDTFNFLAKRR 579
+N K++
Sbjct: 568 VTFSPKNYNMKGKKQ 582
[227][TOP]
>UniRef100_A1XK17 RNA polymerase beta chain (Fragment) n=1 Tax=Nelumbo nucifera
RepID=A1XK17_NELNU
Length = 866
Score = 137 bits (345), Expect = 6e-31
Identities = 69/128 (53%), Positives = 88/128 (68%), Gaps = 1/128 (0%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG CRS+ + F L KDQDQ+ + SLS
Sbjct: 1 GEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGSPCRSNIVPFSLHKDQDQMSVHSLSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKE-TGISNYSIFNQTICTDHSHFMYPAIFHDTF 558
R S L V++D V+H FS + K+ I ++S ++ IC H +F+YPAI H+
Sbjct: 61 EGRYISNLSVTNDQVRHKLFSSDPSSCKKGERILDFSGPDRIICNGHCNFIYPAILHENS 120
Query: 559 NFLAKRRR 582
+ LAKRRR
Sbjct: 121 DLLAKRRR 128
[228][TOP]
>UniRef100_A6YAK6 RNA polymerase beta' subunit (Fragment) n=1 Tax=Haloragis aspera
RepID=A6YAK6_9MAGN
Length = 841
Score = 137 bits (344), Expect = 8e-31
Identities = 66/124 (53%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
Frame = +1
Query: 214 WSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSNGKRN 393
WSTDVYHA EF Y NVH+LP+TSHLWILSG SCRS + FLL KDQDQI++ S+S +R+
Sbjct: 1 WSTDVYHAPEFRYGNVHLLPQTSHLWILSGSSCRSSVVPFLLHKDQDQINVHSVSVERRS 60
Query: 394 TSPLFVSDDHVKHPFFSFKTFATKETG-ISNYSIFNQTICTDHSHFMYPAIFHDTFNFLA 570
S + V++D V+H +S + K+ G I +YS N+ ICT + + + P+I H ++FLA
Sbjct: 61 ISNISVTNDQVRHKIYSSVLSSGKKEGRIPDYSELNRIICTSNCNLIDPSILHHNYDFLA 120
Query: 571 KRRR 582
KRRR
Sbjct: 121 KRRR 124
[229][TOP]
>UniRef100_A6YAJ9 RNA polymerase beta' subunit (Fragment) n=1 Tax=Aphanopetalum
resinosum RepID=A6YAJ9_9MAGN
Length = 811
Score = 136 bits (343), Expect = 1e-30
Identities = 67/123 (54%), Positives = 82/123 (66%)
Frame = +1
Query: 214 WSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSNGKRN 393
WSTDVYHA EF Y NVH+LPKTSHLWILSG SCRS + F L KDQDQ+++ SLS +
Sbjct: 1 WSTDVYHAPEFTYGNVHLLPKTSHLWILSGSSCRSSVVPFSLHKDQDQMNVHSLSVERGY 60
Query: 394 TSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFNFLAK 573
S V++D V+H S KE I +YS FN+ ICT H + +YP I H+ + LAK
Sbjct: 61 ISNPSVTNDQVRHKNLSSNFSGKKEGRIPDYSEFNRLICTSHCNLIYPTILHENSDLLAK 120
Query: 574 RRR 582
RRR
Sbjct: 121 RRR 123
[230][TOP]
>UniRef100_A1XK40 RNA polymerase beta chain (Fragment) n=1 Tax=Eupomatia bennettii
RepID=A1XK40_9MAGN
Length = 859
Score = 136 bits (343), Expect = 1e-30
Identities = 67/125 (53%), Positives = 84/125 (67%)
Frame = +1
Query: 208 MHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSNGK 387
MHWSTDVYHA E++Y NVH+LPKTSHLWILSG CRS I KDQDQ+++ SLS +
Sbjct: 1 MHWSTDVYHAPEYIYGNVHLLPKTSHLWILSGGPCRSSIIPLSFHKDQDQMNVHSLSVER 60
Query: 388 RNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFNFL 567
R S L V++D V+H FS F K GI +YS ++ I H +F+YP I H+ + L
Sbjct: 61 RYISDLSVTNDRVRHKLFSSDPFVKKRGGIFDYSGPDRIISNGHWNFLYPHILHENSDLL 120
Query: 568 AKRRR 582
AKRRR
Sbjct: 121 AKRRR 125
[231][TOP]
>UniRef100_A1XK15 RNA polymerase beta chain (Fragment) n=1 Tax=Grevillea robusta
RepID=A1XK15_9MAGN
Length = 854
Score = 136 bits (343), Expect = 1e-30
Identities = 67/127 (52%), Positives = 85/127 (66%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG C S + F L KDQDQI++ SLS
Sbjct: 1 GEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGDLCGSSIVPFSLHKDQDQINVHSLSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S L V+++ V+H FS + + I NYS ++ +C +F YPAI H+ +
Sbjct: 61 ERRYISKLSVTNEQVRHNLFSSYPSSKRGERILNYSGPDRILCNSRCNFAYPAILHENSD 120
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 121 LLAKRRR 127
[232][TOP]
>UniRef100_P06274 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Marchantia
polymorpha RepID=RPOC2_MARPO
Length = 1386
Score = 136 bits (343), Expect = 1e-30
Identities = 66/121 (54%), Positives = 95/121 (78%), Gaps = 1/121 (0%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
++C+ L++ I+S + +HN+ +PPKS LLVQN+QYV+S+QVIAEIRA T F KE+VQK
Sbjct: 377 WMCHTNLFLVIKSKNKVHNLTIPPKSLLLVQNNQYVESKQVIAEIRAKTSPF--KEKVQK 434
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGK-SCRSDTIHFLLRKDQDQ 357
+IYS+ EGEMHWST V HASE+++SN+H++ KT H+WILSG +++ + L K+QD+
Sbjct: 435 YIYSNLEGEMHWSTKVRHASEYIHSNIHLILKTCHIWILSGNFHKKNNDLSVLFYKNQDK 494
Query: 358 I 360
I
Sbjct: 495 I 495
[233][TOP]
>UniRef100_C8CSB1 RNA polymerase beta'' chain n=1 Tax=Pinus monticola
RepID=C8CSB1_PINMO
Length = 1209
Score = 136 bits (342), Expect = 1e-30
Identities = 80/195 (41%), Positives = 116/195 (59%), Gaps = 2/195 (1%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
+LC+ L +TI+ + N+ +PP+S LLVQNDQYV+SEQ+IAE+RA T +F KE+V+K
Sbjct: 396 YLCHNNLSITIDGQNQAQNLTIPPQSLLLVQNDQYVESEQIIAEVRARTSSF--KEKVRK 453
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IYSD EGEMHWST+V HA E+++ NVH + +T +LWILSG S + F K QDQ+
Sbjct: 454 NIYSDLEGEMHWSTNVCHAPEYVHGNVHSILRTGYLWILSGGIYGSGVVPFPFHKYQDQV 513
Query: 361 HLDSLSNGKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYS--IFNQTICTDHSHFMY 534
+ K S + D V+H + KE I +YS ++TI +H +Y
Sbjct: 514 DVQPFV-AKHTDSYV----DQVEHRSGDSNCYG-KEEQIFSYSETETDRTISNEHRDSIY 567
Query: 535 PAIFHDTFNFLAKRR 579
+N K++
Sbjct: 568 VTFSPKNYNMKGKKQ 582
[234][TOP]
>UniRef100_A6YAK9 RNA polymerase beta' subunit (Fragment) n=1 Tax=Itea virginica
RepID=A6YAK9_9MAGN
Length = 839
Score = 135 bits (341), Expect = 2e-30
Identities = 66/123 (53%), Positives = 89/123 (72%)
Frame = +1
Query: 214 WSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSNGKRN 393
WSTDVYHA+EF Y NVH+LPKTSHLWILSG SCRS+ + F L KDQDQI+L SLS ++
Sbjct: 1 WSTDVYHATEFTYGNVHLLPKTSHLWILSGGSCRSNVVPFCLHKDQDQINLHSLSVERKY 60
Query: 394 TSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFNFLAK 573
S L +++D V+H FS ++ + + I +YS ICTDH + +YP+I H+ ++ L+K
Sbjct: 61 ISNLSMTNDQVRHKLFS--SYCSGKM-IPDYSELTGIICTDHCNLIYPSILHENYDLLSK 117
Query: 574 RRR 582
RRR
Sbjct: 118 RRR 120
[235][TOP]
>UniRef100_A1XK48 RNA polymerase beta chain (Fragment) n=1 Tax=Camellia japonica
RepID=A1XK48_9ERIC
Length = 863
Score = 135 bits (341), Expect = 2e-30
Identities = 66/127 (51%), Positives = 83/127 (65%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDV HA EF Y N+H+LPKTSHLWILSG C+S F L KDQDQ + SLS
Sbjct: 1 GEMHWSTDVCHAPEFTYGNIHLLPKTSHLWILSGGPCKSSLAPFSLHKDQDQTNAHSLSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+ S +++D V+H FFS K+ I +YS N+ +CT H + +YP+I HD +
Sbjct: 61 KRIYISNPSLTNDQVRHKFFSSDFSGKKKDRIPDYSELNRIVCTGHYNLIYPSILHDNSD 120
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 121 LLAKRRR 127
[236][TOP]
>UniRef100_A6YAL4 RNA polymerase beta' subunit (Fragment) n=1 Tax=Penthorum sedoides
RepID=A6YAL4_9MAGN
Length = 842
Score = 135 bits (339), Expect = 3e-30
Identities = 67/124 (54%), Positives = 81/124 (65%)
Frame = +1
Query: 211 HWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSNGKR 390
HWSTDVYHA EF Y NVH+LPKTSHLWILSG SC S + F L KDQDQ+++ SLS +R
Sbjct: 1 HWSTDVYHAPEFTYGNVHLLPKTSHLWILSGSSCGSSVVPFSLHKDQDQMNVHSLSVERR 60
Query: 391 NTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFNFLA 570
S L V++D + S KE I +YS FN+ ICT H + M P I H+ + LA
Sbjct: 61 YISNLSVTNDQARDKICSSDLSGKKEGRIPDYSEFNRIICTGHCNLMDPTILHENSDLLA 120
Query: 571 KRRR 582
KRRR
Sbjct: 121 KRRR 124
[237][TOP]
>UniRef100_A1XK21 RNA polymerase beta chain (Fragment) n=1 Tax=Cocculus trilobus
RepID=A1XK21_9MAGN
Length = 865
Score = 135 bits (339), Expect = 3e-30
Identities = 67/127 (52%), Positives = 83/127 (65%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA ++ Y NVH+LPKTSHLWILSG S + FLL KDQDQ+++ SLS
Sbjct: 1 GEMHWSTDVYHAPKYTYGNVHLLPKTSHLWILSGSPYTSSVVSFLLHKDQDQMNVHSLSA 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+ S L V++D V+H FS K I +YS +Q IC H +F+YPA H +
Sbjct: 61 ERSYISNLSVTNDQVRHKLFSSDPSGKKAGRILDYSGSDQIICKGHCNFIYPATLHADSD 120
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 121 LLAKRRR 127
[238][TOP]
>UniRef100_A1XK65 RNA polymerase beta chain (Fragment) n=1 Tax=Lardizabala biternata
RepID=A1XK65_9MAGN
Length = 861
Score = 134 bits (337), Expect = 5e-30
Identities = 66/127 (51%), Positives = 83/127 (65%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWST+VYHA E+ Y NVH+LPKTSHLWILSG RS + F L KDQDQ+++ S S
Sbjct: 1 GEMHWSTNVYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVHSFSL 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S L V++D V+H F KE I +YS ++ IC H +F YPAI H+
Sbjct: 61 ERRYISNLSVTNDQVRHKLFRSDPSGKKEKRILDYSGSDRIICNGHCNFTYPAILHENSY 120
Query: 562 FLAKRRR 582
+AKRRR
Sbjct: 121 LVAKRRR 127
[239][TOP]
>UniRef100_A1XK19 RNA polymerase beta chain (Fragment) n=1 Tax=Xanthorhiza
simplicissima RepID=A1XK19_XANSI
Length = 861
Score = 134 bits (337), Expect = 5e-30
Identities = 66/127 (51%), Positives = 85/127 (66%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWST VYHA E++Y NVH+LPKTSHLWILSG R+ + F L KDQDQI++ SLS
Sbjct: 1 GEMHWSTAVYHAPEYIYGNVHLLPKTSHLWILSGVPYRASIVPFSLHKDQDQINIYSLSA 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
++ S L V++D V+H F K+ G +YS +++IC DH +F+YPAI D
Sbjct: 61 ERKYISNLSVTNDQVRHKLFRSDPSGKKKGGALDYSGPDRSICNDHCNFIYPAILDDNSY 120
Query: 562 FLAKRRR 582
AKRRR
Sbjct: 121 LFAKRRR 127
[240][TOP]
>UniRef100_A1XK34 RNA polymerase beta chain (Fragment) n=1 Tax=Hedyosmum arborescens
RepID=A1XK34_9MAGN
Length = 869
Score = 134 bits (336), Expect = 7e-30
Identities = 68/130 (52%), Positives = 86/130 (66%), Gaps = 3/130 (2%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEM WSTDVYHASE+ Y NVH+LPKTSHLWILSG +CRS + F L KDQDQ++ SLS
Sbjct: 1 GEMQWSTDVYHASEYTYGNVHLLPKTSHLWILSGSTCRSSIVPFSLHKDQDQMNAHSLSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTD---HSHFMYPAIFHD 552
+R+ S L V++D V+H FS K GI +YS I ++ H +F+ PAI H+
Sbjct: 61 ERRSISDLSVTNDRVRHKLFSSDLSGKKRGGILDYSAGPDRIISNGRGHWNFVNPAILHE 120
Query: 553 TFNFLAKRRR 582
+ L KRRR
Sbjct: 121 NSDLLTKRRR 130
[241][TOP]
>UniRef100_A1XK67 RNA polymerase beta chain (Fragment) n=1 Tax=Chimonanthus praecox
RepID=A1XK67_9MAGN
Length = 857
Score = 133 bits (335), Expect = 9e-30
Identities = 67/127 (52%), Positives = 85/127 (66%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG CRS + F L KDQDQ+++ SLS
Sbjct: 1 GEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGGLCRSSIVPFSLHKDQDQMNVHSLSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S L V++ V+H FS + K +YS ++ I H +F+YPAI H+ +
Sbjct: 61 EQRYISDLSVTNVRVRHKLFSSDSSGKKGGRAPDYSGPDRIISNGHWNFIYPAILHENSD 120
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 121 LLAKRRR 127
[242][TOP]
>UniRef100_A1XK66 RNA polymerase beta chain (Fragment) n=1 Tax=Calycanthus floridus
RepID=A1XK66_CALFL
Length = 861
Score = 133 bits (335), Expect = 9e-30
Identities = 67/127 (52%), Positives = 85/127 (66%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG CRS + F L KDQDQ+++ SLS
Sbjct: 1 GEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGGLCRSSIVPFSLHKDQDQMNVHSLSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S L V++ V+H FS + K +YS ++ I H +F+YPAI H+ +
Sbjct: 61 EQRYISDLSVTNVRVRHKLFSSDSSGKKGGRAPDYSGPDRIISNGHWNFIYPAILHENSD 120
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 121 LLAKRRR 127
[243][TOP]
>UniRef100_A1XK53 RNA polymerase beta chain (Fragment) n=1 Tax=Ilex sp. Qiu 94038
RepID=A1XK53_9AQUA
Length = 866
Score = 133 bits (335), Expect = 9e-30
Identities = 67/127 (52%), Positives = 83/127 (65%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA EF Y NVH+LPKTSHLWIL G+ CRS + L KDQDQ++ SLS
Sbjct: 1 GEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILLGQPCRSSLVSPSLHKDQDQMNAYSLSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S L V+++ V+H FF KE I +YS N+ ICT + +YPAI + +
Sbjct: 61 KRRYISNLSVTNNQVRHKFFRSDFSGKKEDRIPDYSELNRIICTGRCNLIYPAILPENSD 120
Query: 562 FLAKRRR 582
LAK RR
Sbjct: 121 LLAKSRR 127
[244][TOP]
>UniRef100_A1XK92 RNA polymerase beta chain (Fragment) n=1 Tax=Atherosperma moschatum
RepID=A1XK92_9MAGN
Length = 857
Score = 133 bits (334), Expect = 1e-29
Identities = 65/127 (51%), Positives = 86/127 (67%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG CRS + FLL KDQDQ+++ S+
Sbjct: 1 GEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGGLCRSSIVPFLLHKDQDQMNVHSVE- 59
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S L V++D V+H S + + + +YS ++ + H +F+YPAI HD +
Sbjct: 60 -RRYISDLSVTNDRVRHKLVSSDPYGKRGGRVLDYSGPDRILSNGHWNFIYPAILHDNSD 118
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 119 LLAKRRR 125
[245][TOP]
>UniRef100_A1XK16 RNA polymerase beta chain (Fragment) n=1 Tax=Platanus occidentalis
RepID=A1XK16_PLAOC
Length = 863
Score = 133 bits (334), Expect = 1e-29
Identities = 65/127 (51%), Positives = 87/127 (68%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWST+VYHA E+ YS+VH+LPKTSHLWILSG S RS + L KDQDQ+++ SLS
Sbjct: 1 GEMHWSTNVYHAPEYTYSHVHLLPKTSHLWILSGGSYRSSIVPLSLHKDQDQMNVHSLSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S V++D V+H F+ + K I +YS ++ IC H +F+YP+I H+ +
Sbjct: 61 ERRYISNFSVTNDQVRHKLFNSYPSSKKGERILDYSGTDRIICNGHCNFIYPSILHENSD 120
Query: 562 FLAKRRR 582
LAKRRR
Sbjct: 121 LLAKRRR 127
[246][TOP]
>UniRef100_A1XK22 RNA polymerase beta chain (Fragment) n=1 Tax=Akebia quinata
RepID=A1XK22_AKEQU
Length = 861
Score = 132 bits (333), Expect = 2e-29
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWST+VYHA E+ Y NVH+LPKTSHLWILSG RS + F L KDQDQ++++S S
Sbjct: 1 GEMHWSTNVYHAPEYTYGNVHLLPKTSHLWILSGDPYRSSIVPFSLHKDQDQMNVNSFSL 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S L V++D V+H F K I +YS ++ IC H +F YPAI H+ +
Sbjct: 61 ERRYISNLSVTNDQVRHKLFRSDPSGKKAKRILDYSGPDRIICKGHCNFTYPAILHENSD 120
Query: 562 FLAKRRR 582
+AKRRR
Sbjct: 121 LVAKRRR 127
[247][TOP]
>UniRef100_A6YAL3 RNA polymerase beta' subunit (Fragment) n=1 Tax=Paeonia brownii
RepID=A6YAL3_9MAGN
Length = 862
Score = 131 bits (330), Expect = 3e-29
Identities = 66/126 (52%), Positives = 82/126 (65%), Gaps = 2/126 (1%)
Frame = +1
Query: 211 HWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSNGKR 390
HWSTDVYHA EF Y NVH+LPKTSHLW+LSG SC S + F L KDQDQI+ S+S ++
Sbjct: 1 HWSTDVYHAPEFTYGNVHLLPKTSHLWVLSGGSCESSIVPFSLHKDQDQINAHSISVEQK 60
Query: 391 NTSPLFVSDDHVKHPFF--SFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFNF 564
+ S L +++D V+H F KE GI NYS N+ I T H + +YPAI +
Sbjct: 61 SISSLSLTNDQVRHKLFRSDLSLSDKKEGGIPNYSELNRIIWTGHCNLIYPAILLENSYL 120
Query: 565 LAKRRR 582
LAKRRR
Sbjct: 121 LAKRRR 126
[248][TOP]
>UniRef100_A1XK91 RNA polymerase beta chain (Fragment) n=1 Tax=Lomandra obliqua
RepID=A1XK91_9ASPA
Length = 862
Score = 131 bits (330), Expect = 3e-29
Identities = 61/127 (48%), Positives = 85/127 (66%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA E+ YSNVH+LPKTSHLWIL+G RS + F L KDQDQ+++ S
Sbjct: 1 GEMHWSTDVYHAPEYPYSNVHLLPKTSHLWILAGGPYRSSIVSFSLHKDQDQMNVHYFSV 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+R S L +++D V+H + K+ I +YS ++ + H +F+YP+I + ++
Sbjct: 61 DERYISDLSITNDQVRHKLLDLSGTSKKDREILDYSRLDRIVSNSHWNFIYPSILQENYD 120
Query: 562 FLAKRRR 582
FLAKRRR
Sbjct: 121 FLAKRRR 127
[249][TOP]
>UniRef100_Q85C71 DNA-directed RNA polymerase subunit beta'' n=1 Tax=Anthoceros
formosae RepID=RPOC2_ANTFO
Length = 1445
Score = 131 bits (330), Expect = 3e-29
Identities = 81/188 (43%), Positives = 114/188 (60%), Gaps = 4/188 (2%)
Frame = +1
Query: 1 FLCNIELYVTIESHDIIHNVIVPPKSFLLVQNDQYVKSEQVIAEIRAGTYTFNLKERVQK 180
++C +L VTI+S + IHN+I+P +S LL+QN+QYV+S+Q+IAE+ A F KE+VQK
Sbjct: 382 WVCRTDLAVTIKSQNKIHNLIIPSQSLLLIQNNQYVESKQLIAEVHAKVSPF--KEKVQK 439
Query: 181 HIYSDSEGEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQI 360
+IY + EGEMHWS V HAS++++SNVH++ T HLWILSG S D + K+QDQI
Sbjct: 440 YIYCNIEGEMHWSKRVRHASKYLHSNVHLIFNTGHLWILSGSS-HEDKTSSMFFKNQDQI 498
Query: 361 HLDSLSNGKRNTSP---LFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFM 531
N K SP LF+ + + + + KE NYS I +F+
Sbjct: 499 ------NTKFFISPRKILFMKKTNQVNS-KNLDPYLEKEMETLNYSNLYLGILNKSRNFV 551
Query: 532 YPA-IFHD 552
YP+ I HD
Sbjct: 552 YPSIILHD 559
[250][TOP]
>UniRef100_A1XKA2 RNA polymerase beta chain (Fragment) n=1 Tax=Anemopsis californica
RepID=A1XKA2_9MAGN
Length = 825
Score = 130 bits (328), Expect = 6e-29
Identities = 64/127 (50%), Positives = 85/127 (66%)
Frame = +1
Query: 202 GEMHWSTDVYHASEFMYSNVHILPKTSHLWILSGKSCRSDTIHFLLRKDQDQIHLDSLSN 381
GEMHWSTDVYHA E+ Y NVH+LPKTSHLWILSG CRS+ + F L KDQDQ+++ SLS
Sbjct: 1 GEMHWSTDVYHAPEYTYGNVHLLPKTSHLWILSGNPCRSNLVSFSLHKDQDQMNVHSLSL 60
Query: 382 GKRNTSPLFVSDDHVKHPFFSFKTFATKETGISNYSIFNQTICTDHSHFMYPAIFHDTFN 561
+ + S V++D V+H F + GI +YS +Q+I +F+Y AI H+ +
Sbjct: 61 EQGSISDFSVTNDRVRHKLFRSDPSSKGGDGILDYSGPDQSISNGRWNFIYTAILHENSD 120
Query: 562 FLAKRRR 582
LAK+RR
Sbjct: 121 LLAKKRR 127