[UP]
[1][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 206 bits (525), Expect = 8e-52
Identities = 100/187 (53%), Positives = 131/187 (70%), Gaps = 3/187 (1%)
Frame = +3
Query: 21 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 200
PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+ +WG T T
Sbjct: 205 PLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTIT 264
Query: 201 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 380
+ Q QMPH D L+IQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+Y
Sbjct: 265 LEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYY 324
Query: 381 IRIHGIDSQPDLCKQINYKQRFGWF-MVKPEG--TDKEFQMFVPSRVSNLVIKGVDCTNF 551
I+I GID+ P +C+QINY QRF WF +++P K ++ +PSRV N+ K TN+
Sbjct: 325 IQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNY 384
Query: 552 VNAFAIM 572
VNAFAIM
Sbjct: 385 VNAFAIM 391
[2][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 206 bits (525), Expect = 8e-52
Identities = 100/187 (53%), Positives = 131/187 (70%), Gaps = 3/187 (1%)
Frame = +3
Query: 21 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 200
PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+ +WG T T
Sbjct: 1015 PLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTIT 1074
Query: 201 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 380
+ Q QMPH D L+IQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+Y
Sbjct: 1075 LEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYY 1134
Query: 381 IRIHGIDSQPDLCKQINYKQRFGWF-MVKPEG--TDKEFQMFVPSRVSNLVIKGVDCTNF 551
I+I GID+ P +C+QINY QRF WF +++P K ++ +PSRV N+ K TN+
Sbjct: 1135 IQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNY 1194
Query: 552 VNAFAIM 572
VNAFAIM
Sbjct: 1195 VNAFAIM 1201
[3][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 204 bits (518), Expect = 5e-51
Identities = 100/190 (52%), Positives = 130/190 (68%), Gaps = 1/190 (0%)
Frame = +3
Query: 6 AATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW 185
A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR+ +W
Sbjct: 24 ATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALW 83
Query: 186 GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVES 365
G T+ Q QMPH D+ G + L+IQSPFY+TAN G A FWV P+SSPMAPE +ES
Sbjct: 84 GAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIES 143
Query: 366 KFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVDC 542
E+YI+I GI++ LC+ INYKQ FGWF +V+ T+KE + +PSR++N+ K +
Sbjct: 144 ALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEV 203
Query: 543 TNFVNAFAIM 572
N VNAF+IM
Sbjct: 204 INHVNAFSIM 213
[4][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 204 bits (518), Expect = 5e-51
Identities = 100/190 (52%), Positives = 130/190 (68%), Gaps = 1/190 (0%)
Frame = +3
Query: 6 AATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW 185
A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR+ +W
Sbjct: 1044 ATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALW 1103
Query: 186 GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVES 365
G T+ Q QMPH D+ G + L+IQSPFY+TAN G A FWV P+SSPMAPE +ES
Sbjct: 1104 GAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIES 1163
Query: 366 KFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVDC 542
E+YI+I GI++ LC+ INYKQ FGWF +V+ T+KE + +PSR++N+ K +
Sbjct: 1164 ALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEV 1223
Query: 543 TNFVNAFAIM 572
N VNAF+IM
Sbjct: 1224 INHVNAFSIM 1233
[5][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 202 bits (514), Expect = 1e-50
Identities = 100/191 (52%), Positives = 132/191 (69%), Gaps = 1/191 (0%)
Frame = +3
Query: 3 SAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIII 182
+A T PL+ AEKS+T++ ETYSY+ G+LSHFLG+GG +RF VHSTSS ++ KLR+ +
Sbjct: 198 TATTNFPLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFRVHSTSSCLLTSKLRVFL 257
Query: 183 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 362
W + + + H + G IQ+ +TANFG GA+FW++PLS+P AP+ VE
Sbjct: 258 WEHSQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARFWIMPLSAPRAPQTVE 316
Query: 363 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKP-EGTDKEFQMFVPSRVSNLVIKGVD 539
+KFEFYIRI GID PDLC+QINYKQRFGWFM+ P + T E +PSR+ N+ +K
Sbjct: 317 TKFEFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRIGNIGVKNTK 376
Query: 540 CTNFVNAFAIM 572
C NF NAFAIM
Sbjct: 377 CVNFTNAFAIM 387
[6][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 199 bits (506), Expect = 1e-49
Identities = 100/191 (52%), Positives = 130/191 (68%), Gaps = 2/191 (1%)
Frame = +3
Query: 6 AATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW 185
A P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +W
Sbjct: 199 AMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALW 258
Query: 186 GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVES 365
GT P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+
Sbjct: 259 GTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVET 318
Query: 366 KFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDK--EFQMFVPSRVSNLVIKGVD 539
E+YI+I GI++ P LC++INYKQRF W +++ K ++ +PSR+ NL K V
Sbjct: 319 GSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVK 378
Query: 540 CTNFVNAFAIM 572
TNFVNA AI+
Sbjct: 379 VTNFVNALAIL 389
[7][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 199 bits (506), Expect = 1e-49
Identities = 100/191 (52%), Positives = 130/191 (68%), Gaps = 2/191 (1%)
Frame = +3
Query: 6 AATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW 185
A P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +W
Sbjct: 1036 AMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALW 1095
Query: 186 GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVES 365
GT P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+
Sbjct: 1096 GTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVET 1155
Query: 366 KFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDK--EFQMFVPSRVSNLVIKGVD 539
E+YI+I GI++ P LC++INYKQRF W +++ K ++ +PSR+ NL K V
Sbjct: 1156 GSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVK 1215
Query: 540 CTNFVNAFAIM 572
TNFVNA AI+
Sbjct: 1216 VTNFVNALAIL 1226
[8][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 199 bits (505), Expect = 2e-49
Identities = 92/189 (48%), Positives = 131/189 (69%), Gaps = 2/189 (1%)
Frame = +3
Query: 12 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 191
T +P++LA + + + + YSYA G+LSHFLGVGG + FSVHST+S FVSC LR+ +WGT
Sbjct: 1034 TKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFSVHSTASTFVSCSLRVALWGT 1093
Query: 192 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 371
PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F
Sbjct: 1094 IPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGF 1153
Query: 372 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCT 545
++YI IHGI+++ LC++INY Q F WFM++ T + +P+R++NL K V T
Sbjct: 1154 QYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVT 1213
Query: 546 NFVNAFAIM 572
NFVNA AIM
Sbjct: 1214 NFVNALAIM 1222
[9][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 197 bits (500), Expect = 6e-49
Identities = 94/189 (49%), Positives = 130/189 (68%), Gaps = 2/189 (1%)
Frame = +3
Query: 12 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 191
T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT
Sbjct: 201 TKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGT 260
Query: 192 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 371
PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F
Sbjct: 261 VPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGF 320
Query: 372 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCT 545
++YI IHGI + +LC++INY Q F WFM++ T + +P+R++NL K V T
Sbjct: 321 QYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQIT 380
Query: 546 NFVNAFAIM 572
NFVNA AIM
Sbjct: 381 NFVNALAIM 389
[10][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 197 bits (500), Expect = 6e-49
Identities = 94/189 (49%), Positives = 130/189 (68%), Gaps = 2/189 (1%)
Frame = +3
Query: 12 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 191
T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT
Sbjct: 1033 TKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGT 1092
Query: 192 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 371
PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F
Sbjct: 1093 VPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGF 1152
Query: 372 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCT 545
++YI IHGI + +LC++INY Q F WFM++ T + +P+R++NL K V T
Sbjct: 1153 QYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQIT 1212
Query: 546 NFVNAFAIM 572
NFVNA AIM
Sbjct: 1213 NFVNALAIM 1221
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 105 bits (262), Expect = 2e-21
Identities = 57/187 (30%), Positives = 96/187 (51%)
Frame = +3
Query: 12 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 191
T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ KL I +W
Sbjct: 214 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASKLHISMWSK 272
Query: 192 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 371
+ H D G + +L I+ FY+++ +G GA + L SPM+P +++ F
Sbjct: 273 EQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPF 332
Query: 372 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNF 551
+ +I G +C+ IN+ QRFGWF V+P + ++ + ++L + + T +
Sbjct: 333 DMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 392
Query: 552 VNAFAIM 572
NAF M
Sbjct: 393 TNAFLQM 399
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 103 bits (258), Expect = 7e-21
Identities = 58/187 (31%), Positives = 96/187 (51%)
Frame = +3
Query: 12 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 191
T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + RI +W
Sbjct: 202 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSK 260
Query: 192 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 371
I H D G + +L I+ FY+++ +G GA V L SPM+P +++ F
Sbjct: 261 EQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPF 320
Query: 372 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNF 551
+ +I G +C+ IN+ QRFGWF V+P + ++ + ++L + + T +
Sbjct: 321 DMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 380
Query: 552 VNAFAIM 572
NAF M
Sbjct: 381 TNAFLQM 387
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 103 bits (258), Expect = 7e-21
Identities = 58/187 (31%), Positives = 96/187 (51%)
Frame = +3
Query: 12 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 191
T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + RI +W
Sbjct: 885 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSK 943
Query: 192 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 371
I H D G + +L I+ FY+++ +G GA V L SPM+P +++ F
Sbjct: 944 EQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPF 1003
Query: 372 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNF 551
+ +I G +C+ IN+ QRFGWF V+P + ++ + ++L + + T +
Sbjct: 1004 DMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 1063
Query: 552 VNAFAIM 572
NAF M
Sbjct: 1064 TNAFLQM 1070
[14][TOP]
>UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus
RepID=Q65624_9SECO
Length = 557
Score = 61.6 bits (148), Expect = 4e-08
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Frame = +3
Query: 54 SGIET-YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW--GTTPTIAQTGQMP 224
SG T YS+ VGG + +V T SK +SC++ +I+ T + Q ++P
Sbjct: 258 SGTNTFYSFPAAYTQLLQSVGGILHGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLP 317
Query: 225 HCDIVEGGSG-ELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGID 401
C I GG +RIQ+PF F + G Q + + PM + + + +++ + I
Sbjct: 318 GCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQ 376
Query: 402 SQPD-LCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFA 566
+ D + I F W + FQ +P+R+S+LV+ G T NA A
Sbjct: 377 EEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IPARLSDLVLPGQTVTMRRNALA 430
[15][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 57.8 bits (138), Expect = 6e-07
Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 6/164 (3%)
Frame = +3
Query: 72 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 245
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 246 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 413
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349
Query: 414 LCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCT 545
+ F +KP+ +P + + K T
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 393
[16][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 57.4 bits (137), Expect = 8e-07
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
Frame = +3
Query: 75 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 248
Y+ ++S LG GT+ SV S SS F + I W PT+ Q PH + G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290
Query: 249 SGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDL 416
E+ I++ F+S A + ++PLS P+AP+ +EF + I+ DSQ P +
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPPM 350
Query: 417 CKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCT 545
F +KP+ +P + + K T
Sbjct: 351 FSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 393
[17][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 57.0 bits (136), Expect = 1e-06
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Frame = +3
Query: 72 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 245
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289
Query: 246 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 419
G E+ I++ +S A + ++PLS P+AP+ +EF + I+ DSQ
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348
Query: 420 KQINYKQRFGWFM---VKPEGTDKEFQMFVPSRVSNLVIKGVDCT 545
+ + + WF +KP+ +P + + K T
Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 393
[18][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 55.8 bits (133), Expect = 2e-06
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 6/164 (3%)
Frame = +3
Query: 72 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 245
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287
Query: 246 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 413
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 347
Query: 414 LCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCT 545
+ F +KP+ +P + + K T
Sbjct: 348 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 391
[19][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 55.8 bits (133), Expect = 2e-06
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 6/164 (3%)
Frame = +3
Query: 72 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 245
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 816 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875
Query: 246 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 413
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 935
Query: 414 LCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCT 545
+ F +KP+ +P + + K T
Sbjct: 936 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 979
[20][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 55.1 bits (131), Expect = 4e-06
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 6/164 (3%)
Frame = +3
Query: 72 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 245
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 246 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 413
G E+ ++ +S++ + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349
Query: 414 LCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCT 545
+ F +KP+ +P + + K T
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 393