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[1][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 211 bits (536), Expect = 4e-53
Identities = 108/190 (56%), Positives = 136/190 (71%), Gaps = 2/190 (1%)
Frame = +3
Query: 3 DSWHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNFGEEK 182
DSW+ +LR HQG +K RFISGFNVVD +EAGKE+ + FPDF L+PV QPIVR FG+EK
Sbjct: 690 DSWNQMLRNHQGVDKQRFISGFNVVDFVEAGKEKQLHFPDFDLQPVPKHQPIVRTFGKEK 749
Query: 183 QPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTSRAGDFRSEIDGVER 362
QPLLNKS S++V TF FRAGNI IGRQ+DN +AI +ELGRASTS A +
Sbjct: 750 QPLLNKSRSMRVKTFTSFRAGNIPIGRQIDNTAEAINFELGRASTSNA---------INP 800
Query: 363 RLNT--FNLKSLGDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYID 536
RL+T NL++ G+FAF I P AV+ G VL+KID+F I S VC +W++ GY++
Sbjct: 801 RLDTSETNLRAGGEFAFIHTIDLPTAVTEGQVLAKIDIFKKIQDAKSMVCVQWMQAGYVN 860
Query: 537 RNLCFISHLS 566
+NL FISHL+
Sbjct: 861 KNLTFISHLA 870
[2][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 206 bits (524), Expect = 1e-51
Identities = 106/190 (55%), Positives = 135/190 (71%), Gaps = 2/190 (1%)
Frame = +3
Query: 3 DSWHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNFGEEK 182
DSW+ +LR HQG +K RFISGFNVVD +EAGKE+ + FP+F L+PV +QPIVR FGEEK
Sbjct: 714 DSWNQMLRNHQGTDKQRFISGFNVVDFVEAGKEKQLSFPEFDLQPVPKSQPIVRTFGEEK 773
Query: 183 QPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTSRAGDFRSEIDGVER 362
QPLLNKS S++V TF FRAGNI +GR +DN +AI YELGRASTS GV+
Sbjct: 774 QPLLNKSRSMRVKTFSSFRAGNIPVGRHVDNATEAIRYELGRASTS----------GVQP 823
Query: 363 RL--NTFNLKSLGDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYID 536
RL + N+K+ GDFA I P + G++L+KIDL + I TN+RVC+EWL GY+
Sbjct: 824 RLDESCCNIKADGDFACGETIILPATSASGSILAKIDLISLIKNTNTRVCSEWLMDGYVS 883
Query: 537 RNLCFISHLS 566
+NL +SHL+
Sbjct: 884 QNLRAVSHLA 893
[3][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 201 bits (512), Expect = 3e-50
Identities = 103/188 (54%), Positives = 133/188 (70%)
Frame = +3
Query: 3 DSWHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNFGEEK 182
DSW+ +LR HQG +K RFISGFNVVD +EAGKE+ + FP+F L+PV +QP VR FGEEK
Sbjct: 714 DSWNQMLRNHQGVDKQRFISGFNVVDFVEAGKEKQLNFPEFDLQPVPKSQPTVRTFGEEK 773
Query: 183 QPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTSRAGDFRSEIDGVER 362
QPLLNKS S++V TF FRAGNI +GR+LDN +AI YEL RASTS + +D
Sbjct: 774 QPLLNKSRSMRVKTFSSFRAGNIPVGRRLDNTTEAINYELARASTSN----QPRLDE--- 826
Query: 363 RLNTFNLKSLGDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYIDRN 542
++ NLK+ GDFA I P + G++L+KIDL + I TN+RVC+EWL GY+ +N
Sbjct: 827 --SSCNLKADGDFACGETITLPATSASGSILAKIDLISLIKNTNTRVCSEWLMDGYVSQN 884
Query: 543 LCFISHLS 566
L +SHL+
Sbjct: 885 LRAVSHLA 892
[4][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 192 bits (487), Expect = 2e-47
Identities = 99/189 (52%), Positives = 127/189 (67%), Gaps = 1/189 (0%)
Frame = +3
Query: 3 DSWHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNF-GEE 179
DSW A+LR HQGK+K RFI+GFNVVD LE KE +K P+ LEPV TQPIVR F GE
Sbjct: 717 DSWQAMLRNHQGKDKGRFIAGFNVVDALERDKEEPIKMPNLDLEPVPRTQPIVRTFTGEG 776
Query: 180 KQPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTSRAGDFRSEIDGVE 359
KQPLLNKS S+++ +F FR NI +GR++DN +AI YELGRASTS E
Sbjct: 777 KQPLLNKSRSMRIQSFVSFRGSNIPVGRRIDNTAEAINYELGRASTSSVSSRLDE----- 831
Query: 360 RRLNTFNLKSLGDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYIDR 539
+ NLK+ G +AF I+ P V+ GTVL+ ++F I TN++VC++WLE GY+ +
Sbjct: 832 ---SKCNLKAGGSYAFGETIELPATVTPGTVLAVFNIFDKIQETNTKVCSKWLEQGYVSQ 888
Query: 540 NLCFISHLS 566
NL ISHL+
Sbjct: 889 NLTAISHLA 897
[5][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 187 bits (475), Expect = 5e-46
Identities = 101/191 (52%), Positives = 132/191 (69%), Gaps = 3/191 (1%)
Frame = +3
Query: 3 DSWHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNF-GEE 179
DSW A+LR HQGK+K RFI+GFNVVD LE KE ++ P +LEPV +P+VR F GE
Sbjct: 721 DSWQAMLRNHQGKDKGRFIAGFNVVDALERDKEEPIQMPHLELEPVPRHRPVVRTFTGEG 780
Query: 180 KQPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTSRAG-DFRSEIDGV 356
KQP L+KS S+++ +F FR G+I +GR++DN +AI+YELGRASTS G + +D
Sbjct: 781 KQP-LDKSRSMRIQSFAAFRGGSIPVGRRVDNTAEAIKYELGRASTSELGTSLKGRLD-- 837
Query: 357 ERRLNTFNLKSL-GDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYI 533
N++S GDF F I P AV+VGTVL+KID+ I T+S VCAEW++MGY+
Sbjct: 838 ----EQSNIRSNDGDFVFVHTIDLPNAVTVGTVLAKIDILEKIKTTHSAVCAEWVQMGYM 893
Query: 534 DRNLCFISHLS 566
DRNL ISHL+
Sbjct: 894 DRNLKLISHLA 904
[6][TOP]
>UniRef100_UPI0000163D15 84 kDa protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D15
Length = 810
Score = 153 bits (387), Expect = 8e-36
Identities = 74/108 (68%), Positives = 87/108 (80%)
Frame = +3
Query: 3 DSWHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNFGEEK 182
DSW+ +LR HQG +K RFISGFNVVD +EAGKE+ + FPDF L+PV QPIVR FG+EK
Sbjct: 690 DSWNQMLRNHQGVDKQRFISGFNVVDFVEAGKEKQLHFPDFDLQPVPKHQPIVRTFGKEK 749
Query: 183 QPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTSRA 326
QPLLNKS S++V TF FRAGNI IGRQ+DN +AI +ELGRASTS A
Sbjct: 750 QPLLNKSRSMRVKTFTSFRAGNIPIGRQIDNTAEAINFELGRASTSNA 797
[7][TOP]
>UniRef100_UPI000016782A movement protein n=1 Tax=Tomato black ring virus RepID=UPI000016782A
Length = 832
Score = 150 bits (378), Expect = 9e-35
Identities = 71/106 (66%), Positives = 85/106 (80%)
Frame = +3
Query: 3 DSWHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNFGEEK 182
DSW+ +LR HQG +K RFISGFNVVD +EAGKE+ + FP+F L+PV +QP VR FGEEK
Sbjct: 714 DSWNQMLRNHQGVDKQRFISGFNVVDFVEAGKEKQLNFPEFDLQPVPKSQPTVRTFGEEK 773
Query: 183 QPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTS 320
QPLLNKS S++V TF FRAGNI +GR+LDN +AI YEL RASTS
Sbjct: 774 QPLLNKSRSMRVKTFSSFRAGNIPVGRRLDNTTEAINYELARASTS 819
[8][TOP]
>UniRef100_UPI0000163DFD movement protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFD
Length = 837
Score = 138 bits (347), Expect = 3e-31
Identities = 68/107 (63%), Positives = 81/107 (75%), Gaps = 1/107 (0%)
Frame = +3
Query: 3 DSWHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNF-GEE 179
DSW A+LR HQGK+K RFI+GFNVVD LE KE +K P+ LEPV TQPIVR F GE
Sbjct: 717 DSWQAMLRNHQGKDKGRFIAGFNVVDALERDKEEPIKMPNLDLEPVPRTQPIVRTFTGEG 776
Query: 180 KQPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTS 320
KQPLLNKS S+++ +F FR NI +GR++DN +AI YELGRASTS
Sbjct: 777 KQPLLNKSRSMRIQSFVSFRGSNIPVGRRIDNTAEAINYELGRASTS 823
[9][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 121 bits (303), Expect = 4e-26
Identities = 73/192 (38%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 DSWHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNF-GEE 179
DSW A+LR H +EK RF++GFNVVD +E G +G FPDF L+ V Q +VR F ++
Sbjct: 570 DSWDAMLRNHT-EEKRRFLAGFNVVDTIEKGNRKGFSFPDFDLKAVPRHQAVVRTFEDQD 628
Query: 180 KQPLLNKSSSLKVGTFERFRAGNISIGRQLDNRVDAIEYELGRASTSRAGDFRSEIDGVE 359
P+L+K+ S++V TF FRAGNI + LG S + S +
Sbjct: 629 VAPILSKAKSMRVKTFGSFRAGNIPVN------------FLGTPSNGQVASKHSVSENAG 676
Query: 360 RRLNTFNLKSLGDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYIDR 539
+ ++KS +F F+ I P A + G VL+ +D+ A+ T S WL+ GYID
Sbjct: 677 YSVG--DMKSAENFVFTQLITVPAASTKGNVLAGVDILANARTTMSGFYMRWLQKGYIDT 734
Query: 540 NLCFISHLSAGP 575
NL I HL P
Sbjct: 735 NLKLICHLPRAP 746
[10][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 88.6 bits (218), Expect = 3e-16
Identities = 40/61 (65%), Positives = 47/61 (77%)
Frame = +3
Query: 393 GDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYIDRNLCFISHLSAG 572
GDFAFS RI YP A +VGTV+ +D+FA IT TNSRVCAEWLE GY+DRN+ +SHL
Sbjct: 2 GDFAFSQRITYPAARTVGTVIGTLDIFALITTTNSRVCAEWLERGYVDRNILMVSHLFTS 61
Query: 573 P 575
P
Sbjct: 62 P 62
[11][TOP]
>UniRef100_UPI0000164A25 movement protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A25
Length = 683
Score = 87.0 bits (214), Expect = 9e-16
Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 DSWHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNF-GEE 179
DSW A+LR H +EK RF++GFNVVD +E G +G FPDF L+ V Q +VR F ++
Sbjct: 570 DSWDAMLRNHT-EEKRRFLAGFNVVDTIEKGNRKGFSFPDFDLKAVPRHQAVVRTFEDQD 628
Query: 180 KQPLLNKSSSLKVGTFERFRAGNISI 257
P+L+K+ S++V TF FRAGNI +
Sbjct: 629 VAPILSKAKSMRVKTFGSFRAGNIPV 654
[12][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 65.9 bits (159), Expect = 2e-09
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = +3
Query: 393 GDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYIDRNLCFISHLS 566
G+FAF I P AV+ G VL+KID+F I S VC +W++ GY+++NL FISHL+
Sbjct: 3 GEFAFIHTIDLPTAVTEGQVLAKIDIFKKIQDAKSMVCVQWMQAGYVNKNLTFISHLA 60
[13][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 62.4 bits (150), Expect = 2e-08
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +3
Query: 393 GDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYIDRNLCFISHLS 566
G +AF I+ P V+ GTVL+ ++F I TN++VC++WLE GY+ +NL ISHL+
Sbjct: 3 GSYAFGETIELPATVTPGTVLAVFNIFDKIQETNTKVCSKWLEQGYVSQNLTAISHLA 60
[14][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 61.2 bits (147), Expect = 5e-08
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = +3
Query: 393 GDFAFSARIKYPKAVSVGTVLSKIDLFASITGTNSRVCAEWLEMGYIDRNLCFISHLS 566
GDFA I P + G++L+KIDL + I TN+RVC+EWL GY+ +NL +SHL+
Sbjct: 3 GDFACGETITLPATSASGSILAKIDLISLIKNTNTRVCSEWLMDGYVSQNLRAVSHLA 60