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[1][TOP]
>UniRef100_A7Q9K4 Chromosome chr5 scaffold_67, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q9K4_VITVI
Length = 390
Score = 258 bits (660), Expect = 2e-67
Identities = 124/184 (67%), Positives = 149/184 (80%)
Frame = +2
Query: 26 TQIDEFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLR 205
T+ E TA + S P D +RQARRS+DWKAA A+ +SG IY GR+EG N GGLL+R
Sbjct: 64 TEGSEQATAGVVEGSPPPPFDAIRQARRSADWKAARAHLESGFIYEGRIEGFNGGGLLVR 123
Query: 206 FYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKAS 385
FYSL+GFLP+PQLSP HSCKEP+K IQEIAK ++GS++SVKVI DEE RKL+ SEK+A+
Sbjct: 124 FYSLVGFLPFPQLSPSHSCKEPHKTIQEIAKGLIGSLISVKVILADEEKRKLIFSEKEAA 183
Query: 386 WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFL 565
W K+SK +N+GDIF V SVEDYGAFV LRFPDGLYHLTGL+H+SEVSWDLVQDVRD L
Sbjct: 184 WLKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSWDLVQDVRDVL 243
Query: 566 TKGE 577
+G+
Sbjct: 244 NEGD 247
[2][TOP]
>UniRef100_A5BZI0 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5BZI0_VITVI
Length = 418
Score = 250 bits (639), Expect = 5e-65
Identities = 124/194 (63%), Positives = 149/194 (76%), Gaps = 10/194 (5%)
Frame = +2
Query: 26 TQIDEFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLR 205
T+ E TA + S P D +RQARRS+DWKAA A+ +SG IY GR+EG N GGLL+R
Sbjct: 64 TEGSEQATAGVVEGSPPPPFDAIRQARRSADWKAARAHLESGFIYEGRIEGFNGGGLLVR 123
Query: 206 FYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKAS 385
FYSL+GFLP+PQLSP HSCKEP+K IQEIAK ++GS++SVKVI DEE RKL+ SEK+A+
Sbjct: 124 FYSLVGFLPFPQLSPSHSCKEPHKTIQEIAKGLIGSLISVKVILADEEKRKLIFSEKEAA 183
Query: 386 WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPD----------GLYHLTGLIHISEVSW 535
W K+SK +N+GDIF V SVEDYGAFV LRFPD GLYHLTGL+H+SEVSW
Sbjct: 184 WLKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGTSFSVTYITGLYHLTGLVHVSEVSW 243
Query: 536 DLVQDVRDFLTKGE 577
DLVQDVRD L +G+
Sbjct: 244 DLVQDVRDVLNEGD 257
[3][TOP]
>UniRef100_Q9LK47 Similarity to 30s ribosomal protein s1 n=1 Tax=Arabidopsis thaliana
RepID=Q9LK47_ARATH
Length = 392
Score = 229 bits (585), Expect = 9e-59
Identities = 120/195 (61%), Positives = 143/195 (73%), Gaps = 4/195 (2%)
Frame = +2
Query: 5 SSSSSNDTQIDEFDTALLQRPSAPNSL--DTLRQARRS--SDWKAANAYKDSGLIYNGRV 172
SSS++ DT + +A SA NSL DT +A + SDWK A AY SG + G V
Sbjct: 55 SSSATADTDRNSDQSASSSVLSASNSLLRDTSDEASAAGPSDWKTAKAYCKSGDTFEGEV 114
Query: 173 EGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEES 352
+G N GGLL+RF+SL+GFLPYPQLSP SCKEP K I EIAK ++GS L VKV+ DEE+
Sbjct: 115 QGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQKSIHEIAKTLVGSKLPVKVVQADEEN 174
Query: 353 RKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVS 532
RKL+LSEK A W KYS+ VN+GD+F GRV SVEDYGAF+ LRF DGLYHLTGL+H+SEVS
Sbjct: 175 RKLILSEKLALWPKYSQNVNVGDVFNGRVGSVEDYGAFIHLRFDDGLYHLTGLVHVSEVS 234
Query: 533 WDLVQDVRDFLTKGE 577
WD VQDVRD L G+
Sbjct: 235 WDYVQDVRDVLRDGD 249
[4][TOP]
>UniRef100_B9IAB2 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IAB2_POPTR
Length = 299
Score = 226 bits (576), Expect = 1e-57
Identities = 106/156 (67%), Positives = 128/156 (82%), Gaps = 1/156 (0%)
Frame = +2
Query: 113 SDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEI 292
+DWKA AY D G I GRVEG N GGL++RFYSL+GFLP+P LSP HSCK+P K I EI
Sbjct: 1 ADWKAVKAYYDGGHILQGRVEGFNGGGLIVRFYSLVGFLPFPLLSPSHSCKDPQKTIHEI 60
Query: 293 AKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVE 472
AKD+ G ++SVKVI +EE+RKL+ SEK+A WSK+SK +N+G+IF GRV SVEDYGAF+
Sbjct: 61 AKDLTGLLISVKVIHAEEENRKLIFSEKEAVWSKFSKGINVGEIFAGRVGSVEDYGAFIH 120
Query: 473 LRFPDG-LYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+RFPDG LYHLTGL+H+SEVSWDLVQDVRD L G+
Sbjct: 121 MRFPDGSLYHLTGLVHVSEVSWDLVQDVRDILNVGD 156
[5][TOP]
>UniRef100_B4F9P4 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4F9P4_MAIZE
Length = 366
Score = 207 bits (527), Expect = 5e-52
Identities = 99/165 (60%), Positives = 128/165 (77%)
Frame = +2
Query: 83 LDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSC 262
LD +R + ++DW++A A KD G I++ V NSGGL++RF SL GF+P P LSP H C
Sbjct: 61 LDEVRLPQFAADWESARACKDQGRIFSLPVLRANSGGLIVRFNSLQGFVPNPLLSPAHWC 120
Query: 263 KEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVC 442
K+P +PIQ++ KD++G+ +SVKV +V+EE +KLV SEK ASWS YS + +GDI+ G V
Sbjct: 121 KDPKRPIQDVTKDLVGTSISVKVAEVNEEEKKLVFSEKDASWSTYSSRIKIGDIYDGIVG 180
Query: 443 SVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
SV YGAFV LRFPDGLYHLTGL+HISEVSWDLVQDV+DFL +G+
Sbjct: 181 SVFHYGAFVHLRFPDGLYHLTGLVHISEVSWDLVQDVKDFLNEGD 225
[6][TOP]
>UniRef100_B6TZ31 RNA binding S1 n=1 Tax=Zea mays RepID=B6TZ31_MAIZE
Length = 366
Score = 207 bits (526), Expect = 6e-52
Identities = 99/165 (60%), Positives = 127/165 (76%)
Frame = +2
Query: 83 LDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSC 262
LD +R + ++DW++A A KD G I+ V NSGGL++RF SL GF+P P LSP H C
Sbjct: 61 LDEVRLPQFAADWESARACKDQGRIFTLPVLRANSGGLIVRFNSLQGFVPNPLLSPAHWC 120
Query: 263 KEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVC 442
K+P +PIQ++ KD++G+ +SVKV +V+EE +KLV SEK ASWS YS + +GDI+ G V
Sbjct: 121 KDPKRPIQDVTKDLVGTSISVKVAEVNEEEKKLVFSEKDASWSTYSSRIKIGDIYDGIVG 180
Query: 443 SVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
SV YGAFV LRFPDGLYHLTGL+HISEVSWDLVQDV+DFL +G+
Sbjct: 181 SVFHYGAFVHLRFPDGLYHLTGLVHISEVSWDLVQDVKDFLNEGD 225
[7][TOP]
>UniRef100_C5WSY9 Putative uncharacterized protein Sb01g001480 n=1 Tax=Sorghum
bicolor RepID=C5WSY9_SORBI
Length = 366
Score = 205 bits (521), Expect = 2e-51
Identities = 100/165 (60%), Positives = 124/165 (75%)
Frame = +2
Query: 83 LDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSC 262
+D R + + DW+AA YKD G I V NSGGL++RF SL GF+P P LSP H C
Sbjct: 61 VDEARLPQFAVDWEAARTYKDQGNILTLPVLRANSGGLIVRFNSLQGFVPNPLLSPAHWC 120
Query: 263 KEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVC 442
++P +PIQ+I KD++G+ +SVKV +V+EE RKLV SEK ASWS YS + +GDI+ G V
Sbjct: 121 EDPKRPIQDITKDLVGTSISVKVAEVNEEERKLVFSEKDASWSTYSSLIKIGDIYDGIVG 180
Query: 443 SVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
SV YGAFV LRFPDGLYHLTGL+HISEVSWDLVQDV+DFL +G+
Sbjct: 181 SVFPYGAFVHLRFPDGLYHLTGLVHISEVSWDLVQDVQDFLNEGD 225
[8][TOP]
>UniRef100_Q75LC0 Os03g0844900 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q75LC0_ORYSJ
Length = 339
Score = 203 bits (516), Expect = 9e-51
Identities = 102/170 (60%), Positives = 128/170 (75%)
Frame = +2
Query: 68 SAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLS 247
SAP +D R A+ ++DW+AA A +D G I +V NSGGL++RF SL GF+P P LS
Sbjct: 65 SAP-PVDEARLAQFAADWQAARAERDQGKILKLQVIRANSGGLIVRFNSLQGFVPNPLLS 123
Query: 248 PVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIF 427
P H CK+P +PIQ++ KD++GS +SVKV++V+EE RKLV SEK ASW +S V +G I+
Sbjct: 124 PAHWCKDPKRPIQDVTKDLVGSSISVKVVEVNEEERKLVFSEKDASWFTHSSLVKIGAIY 183
Query: 428 IGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G V SV YGAFV LRFPDG YHLTGL+HISEVSWDLVQDVRDFL +G+
Sbjct: 184 DGIVGSVFHYGAFVHLRFPDGNYHLTGLVHISEVSWDLVQDVRDFLNEGD 233
[9][TOP]
>UniRef100_Q75LC1 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=Q75LC1_ORYSJ
Length = 379
Score = 203 bits (516), Expect = 9e-51
Identities = 102/170 (60%), Positives = 128/170 (75%)
Frame = +2
Query: 68 SAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLS 247
SAP +D R A+ ++DW+AA A +D G I +V NSGGL++RF SL GF+P P LS
Sbjct: 65 SAP-PVDEARLAQFAADWQAARAERDQGKILKLQVIRANSGGLIVRFNSLQGFVPNPLLS 123
Query: 248 PVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIF 427
P H CK+P +PIQ++ KD++GS +SVKV++V+EE RKLV SEK ASW +S V +G I+
Sbjct: 124 PAHWCKDPKRPIQDVTKDLVGSSISVKVVEVNEEERKLVFSEKDASWFTHSSLVKIGAIY 183
Query: 428 IGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G V SV YGAFV LRFPDG YHLTGL+HISEVSWDLVQDVRDFL +G+
Sbjct: 184 DGIVGSVFHYGAFVHLRFPDGNYHLTGLVHISEVSWDLVQDVRDFLNEGD 233
[10][TOP]
>UniRef100_C0PNM2 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0PNM2_MAIZE
Length = 370
Score = 201 bits (512), Expect = 3e-50
Identities = 99/169 (58%), Positives = 128/169 (75%), Gaps = 4/169 (2%)
Frame = +2
Query: 83 LDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSC 262
LD +R + ++DW++A A KD G I++ V NSGGL++RF SL GF+P P LSP H C
Sbjct: 61 LDEVRLPQFAADWESARACKDQGRIFSLPVLRANSGGLIVRFNSLQGFVPNPLLSPAHWC 120
Query: 263 K----EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFI 430
K +P +PIQ++ KD++G+ +SVKV +V+EE +KLV SEK ASWS YS + +GDI+
Sbjct: 121 KAKLADPKRPIQDVTKDLVGTSISVKVAEVNEEEKKLVFSEKDASWSTYSSRIKIGDIYD 180
Query: 431 GRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G V SV YGAFV LRFPDGLYHLTGL+HISEVSWDLVQDV+DFL +G+
Sbjct: 181 GIVGSVFHYGAFVHLRFPDGLYHLTGLVHISEVSWDLVQDVKDFLNEGD 229
[11][TOP]
>UniRef100_B9RY10 Putative uncharacterized protein n=1 Tax=Ricinus communis
RepID=B9RY10_RICCO
Length = 365
Score = 201 bits (512), Expect = 3e-50
Identities = 100/165 (60%), Positives = 124/165 (75%)
Frame = +2
Query: 2 SSSSSSNDTQIDEFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGI 181
S S +SND+ T L+ +S D +RQ RRS+DWKAA AY+DSG I+ GR+EG
Sbjct: 56 SVSENSNDSATT---TGFLE-----DSPDAIRQTRRSADWKAARAYRDSGSIFEGRIEGF 107
Query: 182 NSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKL 361
N GGLL+RFYSL+GFLP+PQLSP HSCKEP I EIA+ + GS +SVKV+ +EESRKL
Sbjct: 108 NGGGLLVRFYSLVGFLPFPQLSPSHSCKEPQISIHEIARGLNGSSISVKVLQAEEESRKL 167
Query: 362 VLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLY 496
+ SEK+A WSK+SK + +GDIF+GRV S EDYGAFV L FPDG+Y
Sbjct: 168 IFSEKEAEWSKFSKRIKVGDIFVGRVGSTEDYGAFVHLLFPDGIY 212
[12][TOP]
>UniRef100_A9NXR9 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NXR9_PICSI
Length = 381
Score = 189 bits (481), Expect = 1e-46
Identities = 94/164 (57%), Positives = 119/164 (72%)
Frame = +2
Query: 86 DTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
D R + DWK A YK +G I G+V+G NSGG+L+RF+SL GFLPY Q+SP K
Sbjct: 77 DKANLLRSAVDWKKAETYKGNGEIVEGKVDGSNSGGVLVRFHSLQGFLPYSQMSPSLLLK 136
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
+ +K I E AKD++GS LS+KVI+V EE L+ SEK+A W K+S +N GD+F GRV S
Sbjct: 137 DRSKTISESAKDLIGSTLSLKVIEVSEEENMLIFSEKQAMWEKFS--INEGDVFEGRVSS 194
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
V +GAFV LRFPDG Y++ GL+HISEVSWDLV+DVRD L KG+
Sbjct: 195 VTKFGAFVNLRFPDGGYYVDGLVHISEVSWDLVRDVRDILKKGD 238
[13][TOP]
>UniRef100_C6TC12 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TC12_SOYBN
Length = 115
Score = 173 bits (439), Expect = 8e-42
Identities = 82/110 (74%), Positives = 97/110 (88%)
Frame = +2
Query: 218 MGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKY 397
MGFLP+PQLSPVH+ KEP K IQEIA+ ++GSI+SVKVI DE+++KL+ SEK+A+WSKY
Sbjct: 1 MGFLPFPQLSPVHASKEPEKSIQEIAQGLIGSIMSVKVILADEDNKKLIFSEKEAAWSKY 60
Query: 398 SKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
SK VN+GDIF RV VEDYGAFV LRFPDGLYHLTGLIH+SEVSWDL+Q
Sbjct: 61 SKQVNVGDIFEVRVGYVEDYGAFVHLRFPDGLYHLTGLIHVSEVSWDLIQ 110
[14][TOP]
>UniRef100_A9TN20 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TN20_PHYPA
Length = 298
Score = 149 bits (376), Expect = 2e-34
Identities = 70/158 (44%), Positives = 111/158 (70%)
Frame = +2
Query: 104 RRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPI 283
++++DW+ A + G I+ GRV+ NSGGLL+RF SL GFLP+ Q+ K+ +K +
Sbjct: 3 QKTADWQKAQKVMEDGTIHRGRVDACNSGGLLVRFGSLQGFLPFSQMDSGRIPKDGSKAL 62
Query: 284 QEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGA 463
EIAK+++G ++SVK+I+V+E R+L+ SE++A + + V G ++ G+V SV D+GA
Sbjct: 63 AEIAKELVGDLVSVKMIEVNESERRLIFSERQAVLEENLRLVEEGSVYNGKVNSVTDFGA 122
Query: 464 FVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
FV+L PDG ++GL+HISE+SWD V++ RD L +G+
Sbjct: 123 FVDLALPDGTSSVSGLVHISELSWDPVRNPRDLLEEGQ 160
[15][TOP]
>UniRef100_A9SNI7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SNI7_PHYPA
Length = 299
Score = 119 bits (297), Expect = 2e-25
Identities = 57/158 (36%), Positives = 100/158 (63%)
Frame = +2
Query: 104 RRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPI 283
+R++ W+ A +SG I+ G V+ NSGGL++ F L GFLP+ Q+ ++ ++ +
Sbjct: 2 QRNAAWQKAQETMESGSIHRGVVDACNSGGLVVLFGPLQGFLPFSQMDQGRLLRDSSRSL 61
Query: 284 QEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGA 463
E A++++G +SVK+I+ +E +R+L+ SEK+A + + G ++ G+V SV D+GA
Sbjct: 62 SEFAEELVGDFISVKIIEANETTRRLIFSEKQAVLEANLRLLEEGLVYEGKVNSVTDFGA 121
Query: 464 FVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
FV++ PDG + GL+ SE+SW+ V++ RD G+
Sbjct: 122 FVDVVLPDGTSSVRGLVRTSELSWNPVRNPRDICEIGQ 159
[16][TOP]
>UniRef100_A7NHV1 RNA binding S1 domain protein n=1 Tax=Roseiflexus castenholzii DSM
13941 RepID=A7NHV1_ROSCS
Length = 388
Score = 98.2 bits (243), Expect = 4e-19
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 7/170 (4%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
+L + + DW+ A G I G+V G N GGLL++F + GF+P Q++ +H +
Sbjct: 98 SLTMVQVARDWEEAARLSAEGGIVQGQVIGYNKGGLLVQFNRIRGFVPASQVAQLHG-RT 156
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKAS--WSKYSKY-----VNLGDIF 427
+ Q+ + M+G + +KVI+VD + +LVLSE+ A+ W K K + GDI
Sbjct: 157 AAEERQQALQRMVGQTIPLKVIEVDRDRNRLVLSERSATQEWRKAQKQRLLTELQPGDIL 216
Query: 428 IGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
GRV + ++GAF++L D GL HISE+SW V R+ L+ G+
Sbjct: 217 TGRVNQLTNFGAFIDLGGAD------GLAHISELSWQRVNHPREVLSPGQ 260
[17][TOP]
>UniRef100_A5V175 RNA binding S1 domain protein n=1 Tax=Roseiflexus sp. RS-1
RepID=A5V175_ROSS1
Length = 393
Score = 98.2 bits (243), Expect = 4e-19
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 7/170 (4%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
+L + + DW+ A G I G+V G N GGLL++F + GF+P Q++ +H +
Sbjct: 98 SLTMVQVARDWEEAARLSAEGGIVQGQVIGYNKGGLLVQFNRIRGFVPASQVAQLHG-RT 156
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKAS--WSKYSKY-----VNLGDIF 427
+ Q+ + M+G + +KVI+VD + +LVLSE+ A+ W K K + GDI
Sbjct: 157 AAEERQQALQRMVGQTIPLKVIEVDRDRNRLVLSERSATQEWRKAQKQRLLTELQPGDIL 216
Query: 428 IGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
GRV + ++GAF++L D GL HISE+SW V R+ L+ G+
Sbjct: 217 TGRVNQLTNFGAFIDLGGAD------GLAHISELSWQRVNHPREVLSPGQ 260
[18][TOP]
>UniRef100_A9WF65 RNA binding S1 domain protein n=2 Tax=Chloroflexus
RepID=A9WF65_CHLAA
Length = 391
Score = 95.9 bits (237), Expect = 2e-18
Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 7/170 (4%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
+L + + DW+ A G I +V G N GGLL++F + GF+P Q++ +H
Sbjct: 99 SLSMVQVAKDWEVAEQLFHDGGITRCKVIGFNKGGLLVQFNRIRGFVPSSQVAQLHGRTA 158
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKAS--WSKYSKY-----VNLGDIF 427
++ Q + K M+ + +KVI+VD E +LVLSE+ A+ W K K+ + GD+
Sbjct: 159 ADERQQALQK-MVNQEIPLKVIEVDRERNRLVLSERAATQEWRKAQKHRLLTELQPGDVL 217
Query: 428 IGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+GRV + ++GAF++L D GL HISE+SW V R+ L G+
Sbjct: 218 VGRVNQLTNFGAFIDLGGAD------GLAHISELSWQRVNHPREVLQPGQ 261
[19][TOP]
>UniRef100_B8G765 RNA binding S1 domain protein n=1 Tax=Chloroflexus aggregans DSM
9485 RepID=B8G765_CHLAD
Length = 397
Score = 92.4 bits (228), Expect = 2e-17
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 7/170 (4%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
+L + + DW+ A G I +V G N GGLL++F + GF+P Q++ +H
Sbjct: 99 SLSMVQVAKDWEVAEQLFRDGGITRCKVIGFNKGGLLVQFNRIRGFVPASQVAQLHGRTA 158
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKAS--WSKYSKY-----VNLGDIF 427
++ Q + M+ + +KVI+VD E +LVLSE+ A+ W K K+ + GD+
Sbjct: 159 ADER-QYALQKMINQEIPLKVIEVDRERNRLVLSERAATQEWRKAQKHRLLTELQPGDVL 217
Query: 428 IGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+G+V + ++GAF++L D GL HISE+SW V R+ L G+
Sbjct: 218 VGKVNQLTNFGAFIDLGGAD------GLAHISELSWQRVNHPREVLQPGQ 261
[20][TOP]
>UniRef100_UPI00016B22D3 RNA binding S1 domain protein n=1 Tax=candidate division TM7
single-cell isolate TM7c RepID=UPI00016B22D3
Length = 358
Score = 91.3 bits (225), Expect = 5e-17
Identities = 55/172 (31%), Positives = 95/172 (55%), Gaps = 6/172 (3%)
Frame = +2
Query: 80 SLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHS 259
SL +LR+A + W+ +A +SG + + + N GGLL+ + + GFLP QLS H
Sbjct: 83 SLLSLRKAVKDRGWEEVSARLESGEVIDIQPYDANRGGLLVEYEGVRGFLPVSQLSAEHY 142
Query: 260 CKEPNKPIQEIAK---DMLGSILSVKVIDVDEESRKLVLSEKKA---SWSKYSKYVNLGD 421
+ + EI + +++G + V+++D D +S KL+ SEK+A ++ + + +GD
Sbjct: 143 PRVGSSDKDEILQRLNNLIGKTMKVRILDADRKSNKLIFSEKEAVKDGLAERFEKLAVGD 202
Query: 422 IFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G V V D+G FV + + GL+HISE+SW+ V + D++ G+
Sbjct: 203 QVEGVVTGVVDFGVFVNVE------GIEGLVHISEISWERVNNPSDYVKTGQ 248
[21][TOP]
>UniRef100_B0KVD5 30S ribosomal protein S1 n=1 Tax=uncultured candidate division WWE3
bacterium EJ0ADIGA11YD11 RepID=B0KVD5_9BACT
Length = 414
Score = 86.7 bits (213), Expect = 1e-15
Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
+L++A + W+ A + GLI + V N GGLL L GF+P L VH +
Sbjct: 96 SLKKAEKDKKWQDAEEAFEKGLIIDATVIEYNKGGLLCDSLGLRGFIPLSHLDRVHFAND 155
Query: 269 PNK-------PIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKK--ASWSKYSKYVNLGD 421
K ++E K + G L VKVI++D+E + VLSEK A++S+ S+ L +
Sbjct: 156 VAKFAAGSEAELKESLKILSGKTLRVKVIEIDKEKNRFVLSEKDALATYSEESRKKRLSE 215
Query: 422 IFIGR-----VCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
I IG V + +G FV+L DG + GL+HISE++W+ V ++ G+
Sbjct: 216 IKIGSTVEGIVTGIMPFGVFVDL---DG---VEGLVHISEIAWEKVSHPSNYFKVGQ 266
[22][TOP]
>UniRef100_Q7XYL3 Ribosomal protein rpS1 n=1 Tax=Bigelowiella natans
RepID=Q7XYL3_BIGNA
Length = 419
Score = 86.7 bits (213), Expect = 1e-15
Identities = 47/154 (30%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W + + +G++ N GG ++ SL GFLP+ Q++ + K
Sbjct: 208 WTRVRQMAELDVTLSGKILSHNRGGFIIEVDSLQGFLPFSQMAT------------SVDK 255
Query: 299 D-MLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVEL 475
D M+G ++ VK ++VD E+++LV+S ++A S + K +GD+ +G V +++ YGAF+ L
Sbjct: 256 DEMIGKVIPVKFLEVDMENQRLVMSNRRAVASSFKKNYKVGDVVVGTVTALKPYGAFINL 315
Query: 476 RFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ GL+HIS++S D V V+D + G+
Sbjct: 316 G------GVNGLLHISQISHDHVTSVKDVMDVGQ 343
[23][TOP]
>UniRef100_A9B766 RNA binding S1 domain protein n=1 Tax=Herpetosiphon aurantiacus
ATCC 23779 RepID=A9B766_HERA2
Length = 397
Score = 84.3 bits (207), Expect = 6e-15
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 7/170 (4%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
+L + DW+ A ++G I V G N GGLL++ + GF+P Q+ +HS +
Sbjct: 95 SLNMVQVERDWQEAQTMLENGQIIEAGVVGYNKGGLLVQVGRVRGFVPASQVVNLHS-RT 153
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKA--SWSKYSK-----YVNLGDIF 427
+ Q M+G + +KVI+VD + +LVLSE+ A W + K + G +
Sbjct: 154 GTEGQQSAMTKMVGQNIPLKVIEVDRDRNRLVLSERAAMQRWRQSQKERLLETLEPGAVV 213
Query: 428 IGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
GRV + +GAF++L D GL HISE+SW V R+ L G+
Sbjct: 214 TGRVNQLTPFGAFIDLGGAD------GLAHISELSWQRVNHPREVLQPGQ 257
[24][TOP]
>UniRef100_A8J2S3 RNA binding protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8J2S3_CHLRE
Length = 360
Score = 84.3 bits (207), Expect = 6e-15
Identities = 51/160 (31%), Positives = 88/160 (55%)
Frame = +2
Query: 98 QARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNK 277
QA S + A + K+ G ++ G N GG++++F L GF+PY +L P N
Sbjct: 74 QAAISEAYIKAASSKERGETVEVKIVGQNEGGVMVQFGPLRGFMPYNKLDPARLRACANG 133
Query: 278 PIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDY 457
+ ++ +G + ++I D ++LVLSE++ + ++ V+ GD+ G V VEDY
Sbjct: 134 DLTKL----IGQQIKARIITADIARKELVLSERQVAAAEALGRVSEGDVIEGVVTGVEDY 189
Query: 458 GAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
GAF++++ GL + GL+H SEV+W + V + L G+
Sbjct: 190 GAFIQIK---GLPDVFGLVHKSEVTWARILTVDEVLKLGQ 226
[25][TOP]
>UniRef100_A7NKT3 RNA binding S1 domain protein n=1 Tax=Roseiflexus castenholzii DSM
13941 RepID=A7NKT3_ROSCS
Length = 411
Score = 83.6 bits (205), Expect = 1e-14
Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++ +AR+ W+ ++G I +V N GGLL+ + GF+P Q+S + E
Sbjct: 121 SIDRARQEKSWRRLQQCYETGEIIEAKVINYNKGGLLVNLDGVRGFVPSSQVSGIGRGSE 180
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASW-------SKYSKYVNLGDIF 427
K E+A+ M+G L++KVI+++ +L+LSE++A+ + + GD+
Sbjct: 181 AQKQ-SEMAR-MVGQTLALKVIEINRNRNRLILSERQAAMDVREGRKGELLSALKEGDVR 238
Query: 428 IGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G V SV D+GAFV++ D GL+H+SE+SW V+ + L G+
Sbjct: 239 EGVVTSVCDFGAFVDIGGAD------GLVHLSELSWSRVKHPSEILKPGD 282
[26][TOP]
>UniRef100_C0UWP5 SSU ribosomal protein S1P n=1 Tax=Thermobaculum terrenum ATCC
BAA-798 RepID=C0UWP5_9BACT
Length = 431
Score = 83.6 bits (205), Expect = 1e-14
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Frame = +2
Query: 98 QARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNK 277
+AR W+ ++G I + +V G N GGLL+ L GF+P Q+S + S + ++
Sbjct: 149 RARAERLWRELQQKLETGEIVDCKVVGYNKGGLLVDLGGLRGFIPSSQISFLVSSNDADR 208
Query: 278 PIQEIAKDMLGSILSVKVIDVDEESRKLVLSE-------KKASWSKYSKYVNLGDIFIGR 436
Q +++G L KVI+V+ + +L+LSE K+ S + + + G I GR
Sbjct: 209 --QSELANLVGRTLQAKVIEVNRKRNRLILSERIATQERKETSKERLIEELREGQIVKGR 266
Query: 437 VCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
V S+ D+GAFV++ D GLIH+SE+SW + + L G+
Sbjct: 267 VTSLADFGAFVDIGGAD------GLIHLSEISWGRINHPSEVLKPGD 307
[27][TOP]
>UniRef100_B0NCJ7 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
35704 RepID=B0NCJ7_EUBSP
Length = 227
Score = 83.6 bits (205), Expect = 1e-14
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 8/164 (4%)
Frame = +2
Query: 110 SSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQE 289
++ W +Y D+ + +VEGI +GG + L GF+P +LS + I++
Sbjct: 26 ANPWNLVQSYMDNKTVLPVKVEGIVNGGAIAMVEGLRGFIPASKLSLSY--------IED 77
Query: 290 IAKDMLGSILSVKVIDVDEESRKLVLS--------EKKASWSKYSKYVNLGDIFIGRVCS 445
+ +L I V+VIDVD+ + +LVLS EKKA K + V +G + G+V S
Sbjct: 78 LETYLLKDI-EVRVIDVDQANNRLVLSAREILKEKEKKAMEEKIAN-VKVGSVLTGKVES 135
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+++YGAFV R DG L+GL+HIS++S V+ +D LT+G+
Sbjct: 136 LQNYGAFV--RLEDG---LSGLVHISQISQKRVKSPKDVLTEGQ 174
[28][TOP]
>UniRef100_B8G954 RNA binding S1 domain protein n=1 Tax=Chloroflexus aggregans DSM
9485 RepID=B8G954_CHLAD
Length = 400
Score = 83.2 bits (204), Expect = 1e-14
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++ +AR+ W+A Y + G I RV+ N GGLL+ + GF+P Q+S V E
Sbjct: 116 SIDKARQEKSWRALQEYYERGEIIYARVKNYNKGGLLVDLDGVRGFVPASQVSSVSRASE 175
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKA-----SWSKYSKYVNL--GDIF 427
K E+A+ ++ L +KVI+++ +L+LSE++A K +L GD+
Sbjct: 176 AQKQ-SEMAR-LVNVELPLKVIEINRNRNRLILSERQALVETRETKKDELLASLQEGDVR 233
Query: 428 IGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G V SV D+G FV++ D GL+H+SE+SW V+ + L G+
Sbjct: 234 EGVVSSVCDFGVFVDIGGAD------GLVHLSEISWSRVKHPSEVLKVGD 277
Score = 56.2 bits (134), Expect = 2e-06
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Frame = +2
Query: 305 LGSILSVKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVEL 475
+G + V ++++D E +++ LS K+ W++ ++ LG I G V + +GAFV
Sbjct: 275 VGDKVKVSILNIDHERKRIALSIKRTQSEPWTRVAERYQLGQIVEGTVTQLASFGAFV-- 332
Query: 476 RFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
R DG+ GLIH+SE+ + +Q RD L++G+
Sbjct: 333 RIEDGV---EGLIHVSEMGDERIQHPRDVLSEGQ 363
[29][TOP]
>UniRef100_A5UU17 SSU ribosomal protein S1P n=1 Tax=Roseiflexus sp. RS-1
RepID=A5UU17_ROSS1
Length = 403
Score = 82.8 bits (203), Expect = 2e-14
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++ +AR+ W+ ++G + RV N GGLL+ + GF+P Q+S + +
Sbjct: 123 SIDRARQEKSWRRLQQCYETGEVIEARVVNYNKGGLLVNLDGVRGFVPSSQVSGISRGSD 182
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASW-------SKYSKYVNLGDIF 427
K E+A+ M+G L +KVI+++ +L+LSE++A+ + + GD+
Sbjct: 183 TQKQ-SEMAR-MVGQTLMLKVIEINRNRNRLILSERQAAMDMREGRKGELLSALKEGDVR 240
Query: 428 IGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G V SV D+GAFV++ D GL+H+SE+SW ++ + L G+
Sbjct: 241 EGIVTSVCDFGAFVDIGGAD------GLVHLSEISWSRIKHPGEVLKPGD 284
[30][TOP]
>UniRef100_A9S0R6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9S0R6_PHYPA
Length = 389
Score = 82.8 bits (203), Expect = 2e-14
Identities = 46/163 (28%), Positives = 87/163 (53%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
+LR+ + W+ ++ G + NSGG ++ L GF+P+ Q+S V
Sbjct: 170 SLRKIQHELCWERCAQLLADDVVVRGTILSSNSGGFVVAVEGLRGFVPFSQISAV----- 224
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
Q +++L + +K ++VDEE +LVLS +KA++++ +G + +G V +V
Sbjct: 225 ----TQSNPEELLNKEIPLKFLEVDEERTRLVLSNRKATFAESQSAFGIGSVVVGTVQTV 280
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ YGAF+++ ++GL+HIS++S D + V L+ G+
Sbjct: 281 KPYGAFIDIG------GVSGLLHISQISHDRLTSVETVLSPGD 317
[31][TOP]
>UniRef100_A7Q8U9 Chromosome chr5 scaffold_64, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q8U9_VITVI
Length = 410
Score = 82.8 bits (203), Expect = 2e-14
Identities = 48/163 (29%), Positives = 85/163 (52%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
+LR + W+ + ++ G+V G N GG++ L GF+P+ Q+S
Sbjct: 163 SLRSIQYDLAWERCRQLQAEDVVVKGKVVGANKGGVVALVEGLRGFVPFSQISS------ 216
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
+ A+++L L VK ++VDEE +LVLS +KA ++ + +G + G V S+
Sbjct: 217 -----KTTAEELLDKELPVKFVEVDEEQSRLVLSNRKAMADSQAQ-LGIGSVVTGTVQSL 270
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ YGAF+++ + GL+H+S++S D V D+ L G+
Sbjct: 271 KPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGD 307
[32][TOP]
>UniRef100_P29344 30S ribosomal protein S1, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RR1_SPIOL
Length = 411
Score = 82.0 bits (201), Expect = 3e-14
Identities = 46/163 (28%), Positives = 86/163 (52%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
+LRQ + W+ + ++ G++ G N GG++ L GF+P+ Q+S S
Sbjct: 164 SLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSS--- 220
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
A+++L + +K ++VDEE +LV+S +KA ++ + +G + G V S+
Sbjct: 221 --------AEELLEKEIPLKFVEVDEEQSRLVMSNRKAMADSQAQ-LGIGSVVTGTVQSL 271
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ YGAF+++ + GL+H+S++S D V D+ L G+
Sbjct: 272 KPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGD 308
[33][TOP]
>UniRef100_A9AV75 RNA binding S1 domain protein n=1 Tax=Herpetosiphon aurantiacus
ATCC 23779 RepID=A9AV75_HERA2
Length = 415
Score = 81.3 bits (199), Expect = 5e-14
Identities = 50/170 (29%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++ +AR+ W+A ++G + + V N GGLL+ + GF+P Q+S V +
Sbjct: 120 SIDKARQEKSWRALQVNHEAGDVIHAAVTNYNKGGLLVNLSGVRGFVPSSQVSSVSRGSD 179
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKA-------SWSKYSKYVNLGDIF 427
K ++AK ++G L +K+I+++ +L+LSE++A + + + G +
Sbjct: 180 VQKQ-SDMAK-LVGQTLPLKIIEINRSRNRLILSERQAVQEVRDSRKDQLLEKLEPGAVR 237
Query: 428 IGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
GRV S+ D+GAFV++ D GL+H+SE+SW V+ + L G+
Sbjct: 238 TGRVTSLCDFGAFVDIGGAD------GLVHLSELSWSRVKHPEEVLKVGD 281
Score = 58.5 bits (140), Expect = 4e-07
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 17/209 (8%)
Frame = +2
Query: 2 SSSSSSNDTQIDEFDTALLQRPSAPNSLDTLRQARRS---SDWKAANAYKDS-------- 148
SS S +D Q + D A L + P + + ++R S+ +A +DS
Sbjct: 172 SSVSRGSDVQ-KQSDMAKLVGQTLPLKIIEINRSRNRLILSERQAVQEVRDSRKDQLLEK 230
Query: 149 ---GLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSIL 319
G + GRV + G + G + +LS K P +E+ K +G +
Sbjct: 231 LEPGAVRTGRVTSLCDFGAFVDIGGADGLVHLSELS-WSRVKHP----EEVLK--VGDAV 283
Query: 320 SVKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDG 490
SV ++ VDE+ +++ LS K+ W+ + +G G V + +GAFV L DG
Sbjct: 284 SVYILSVDEDKKRIALSIKRTQAEPWTTVTDRYQIGQSVSGVVTQLTAFGAFVRLE--DG 341
Query: 491 LYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ GLIHISE+S + +Q RD + +G+
Sbjct: 342 I---EGLIHISEMSDERIQHPRDVINEGD 367
[34][TOP]
>UniRef100_Q93VC7 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
RepID=Q93VC7_ARATH
Length = 416
Score = 81.3 bits (199), Expect = 5e-14
Identities = 52/182 (28%), Positives = 94/182 (51%)
Frame = +2
Query: 32 IDEFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFY 211
++EF + + S + L +LR + W+ + +I +V G N GGL+
Sbjct: 149 VEEF-VIIGENESDDSLLLSLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVE 207
Query: 212 SLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWS 391
L GF+P+ Q+S + A+++L + +K ++VDEE KLVLS +KA
Sbjct: 208 GLRGFVPFSQISS-----------KAAAEELLEKEIPLKFVEVDEEQTKLVLSNRKAVAD 256
Query: 392 KYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTK 571
++ + +G + +G V S++ YGAF+++ + GL+H+S++S D V D+ L
Sbjct: 257 SQAQ-LGIGSVVLGVVQSLKPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQP 309
Query: 572 GE 577
G+
Sbjct: 310 GD 311
[35][TOP]
>UniRef100_C0Z2U7 AT5G30510 protein n=1 Tax=Arabidopsis thaliana RepID=C0Z2U7_ARATH
Length = 378
Score = 81.3 bits (199), Expect = 5e-14
Identities = 52/182 (28%), Positives = 94/182 (51%)
Frame = +2
Query: 32 IDEFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFY 211
++EF + + S + L +LR + W+ + +I +V G N GGL+
Sbjct: 149 VEEF-VIIGENESDDSLLLSLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVE 207
Query: 212 SLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWS 391
L GF+P+ Q+S + A+++L + +K ++VDEE KLVLS +KA
Sbjct: 208 GLRGFVPFSQISS-----------KAAAEELLEKEIPLKFVEVDEEQTKLVLSNRKAVAD 256
Query: 392 KYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTK 571
++ + +G + +G V S++ YGAF+++ + GL+H+S++S D V D+ L
Sbjct: 257 SQAQ-LGIGSVVLGVVQSLKPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQP 309
Query: 572 GE 577
G+
Sbjct: 310 GD 311
[36][TOP]
>UniRef100_B9RZW3 Tex protein-relatedtranscription accessory protein, putative n=1
Tax=Ricinus communis RepID=B9RZW3_RICCO
Length = 412
Score = 80.9 bits (198), Expect = 7e-14
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 1/164 (0%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYS-LMGFLPYPQLSPVHSCK 265
+LR + W+ + +I G+V G N GG++ L GF+P+ Q+S
Sbjct: 165 SLRAIQYDLSWERCRQLQAEDVIVKGKVVGANKGGVVAIVEGGLRGFVPFSQISS----- 219
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
+ A+++L L +K +DVDEE +LVLS +KA ++ + +G + IG V S
Sbjct: 220 ------KSTAEELLEKELPLKFVDVDEEQSRLVLSNRKAMADSQAQ-LGIGSVVIGTVQS 272
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++ YGAF+++ + GL+H+S++S D V D+ L G+
Sbjct: 273 LKPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGD 310
[37][TOP]
>UniRef100_B9HX66 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9HX66_POPTR
Length = 412
Score = 80.9 bits (198), Expect = 7e-14
Identities = 49/163 (30%), Positives = 84/163 (51%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
+LR + W+ + I G+V G N GG++ L GF+P+ Q+S S
Sbjct: 165 SLRSIQYELAWERCRQLQAEDAIVKGKVVGGNRGGVVAVVEGLQGFVPFSQISSKSS--- 221
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
A+++L + +K +DVDEE +LVLS +KA ++ + +G + G V S+
Sbjct: 222 --------AEELLDKEVPLKFVDVDEEQSRLVLSNRKAMADSQAQ-LGIGSVVTGTVQSL 272
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ YGAF+++ + GL+H+S++S D V D+ L G+
Sbjct: 273 KPYGAFIDIG------GINGLLHVSQISHDRVSDISTVLQPGD 309
[38][TOP]
>UniRef100_B3SL74 At5g30510-like protein (Fragment) n=5 Tax=Arabidopsis
RepID=B3SL74_ARALP
Length = 186
Score = 80.9 bits (198), Expect = 7e-14
Identities = 50/173 (28%), Positives = 89/173 (51%)
Frame = +2
Query: 59 QRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYP 238
+ S + L +LR + W+ + +I +V G N GGL+ L GF+P+
Sbjct: 4 ENESDDSLLLSLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFS 63
Query: 239 QLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLG 418
Q+S + A+++L + +K ++VDEE KLVLS +KA ++ + +G
Sbjct: 64 QISS-----------KAAAEELLEKEIPLKFVEVDEEQTKLVLSNRKAVADSQAQ-LGIG 111
Query: 419 DIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ +G V S++ YGAF+++ + GL+H+S++S D V D+ L G+
Sbjct: 112 SVVLGVVQSLKPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGD 158
[39][TOP]
>UniRef100_Q0DSD6 Os03g0315800 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DSD6_ORYSJ
Length = 390
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/173 (27%), Positives = 90/173 (52%)
Frame = +2
Query: 59 QRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYP 238
+ P + +L+ ++ W+ + ++ G+V G N GG++ L GF+P+
Sbjct: 136 ENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKGGVVALVEGLKGFVPFS 195
Query: 239 QLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLG 418
Q+S + A+++L L +K ++VDEE +LVLS +KA ++ + +G
Sbjct: 196 QVSS-----------KSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQAQ-LGIG 243
Query: 419 DIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ +G V S++ YGAF+++ + GL+H+S++S D V D+ L G+
Sbjct: 244 SVVLGTVESLKPYGAFIDIG------GINGLLHVSQISHDRVADISTVLQPGD 290
[40][TOP]
>UniRef100_B9F848 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9F848_ORYSJ
Length = 382
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/173 (27%), Positives = 90/173 (52%)
Frame = +2
Query: 59 QRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYP 238
+ P + +L+ ++ W+ + ++ G+V G N GG++ L GF+P+
Sbjct: 128 ENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKGGVVALVEGLKGFVPFS 187
Query: 239 QLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLG 418
Q+S + A+++L L +K ++VDEE +LVLS +KA ++ + +G
Sbjct: 188 QVSS-----------KSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQAQ-LGIG 235
Query: 419 DIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ +G V S++ YGAF+++ + GL+H+S++S D V D+ L G+
Sbjct: 236 SVVLGTVESLKPYGAFIDIG------GINGLLHVSQISHDRVADISTVLQPGD 282
[41][TOP]
>UniRef100_Q10MB2 30S ribosomal protein S1, chloroplast, putative, expressed n=2
Tax=Oryza sativa RepID=Q10MB2_ORYSJ
Length = 402
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/173 (27%), Positives = 90/173 (52%)
Frame = +2
Query: 59 QRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYP 238
+ P + +L+ ++ W+ + ++ G+V G N GG++ L GF+P+
Sbjct: 148 ENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKGGVVALVEGLKGFVPFS 207
Query: 239 QLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLG 418
Q+S + A+++L L +K ++VDEE +LVLS +KA ++ + +G
Sbjct: 208 QVSS-----------KSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQAQ-LGIG 255
Query: 419 DIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ +G V S++ YGAF+++ + GL+H+S++S D V D+ L G+
Sbjct: 256 SVVLGTVESLKPYGAFIDIG------GINGLLHVSQISHDRVADISTVLQPGD 302
[42][TOP]
>UniRef100_A6BHV7 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
13814 RepID=A6BHV7_9FIRM
Length = 269
Score = 79.7 bits (195), Expect = 1e-13
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Frame = +2
Query: 110 SSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQE 289
++ W +Y + G + +VEGI +GG + L GF+P +LS + I++
Sbjct: 66 ANPWNVVKSYMEKGTVLPVKVEGIVNGGAIAMVEGLRGFIPASRLSLSY--------IED 117
Query: 290 IAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSK-------YVNLGDIFIGRVCSV 448
+ +L I VKVIDVDE + +LVLS ++ K K V +G I G V S+
Sbjct: 118 LETYLLKDI-EVKVIDVDEANNRLVLSAREILQEKARKEREAKIAAVKVGSIVTGTVESL 176
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++YGAFV+L DG L+GL+HIS++S ++ D L G+
Sbjct: 177 QNYGAFVDL--GDG---LSGLVHISQISLKRIKSPADVLNVGD 214
[43][TOP]
>UniRef100_C5X1V3 Putative uncharacterized protein Sb01g037100 n=1 Tax=Sorghum
bicolor RepID=C5X1V3_SORBI
Length = 400
Score = 79.7 bits (195), Expect = 1e-13
Identities = 47/173 (27%), Positives = 90/173 (52%)
Frame = +2
Query: 59 QRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYP 238
+ P + +L+ ++ W+ + ++ G+V G N GG++ L GF+P+
Sbjct: 149 ENPGDETLILSLQAIQQELAWERCRQLQAEDVVVTGKVIGGNKGGVVALVEGLKGFVPFS 208
Query: 239 QLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLG 418
Q+S + A+++L L +K ++VDEE +LVLS +KA ++ + +G
Sbjct: 209 QVSS-----------KTTAEELLDKELPLKYVEVDEEQGRLVLSNRKAMADSQAQ-LGIG 256
Query: 419 DIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ +G V S++ YGAF+++ + GL+H+S++S D V D+ L G+
Sbjct: 257 SVVLGTVESLKPYGAFIDIG------GINGLLHVSQISHDRVADISTVLQPGD 303
[44][TOP]
>UniRef100_C6T883 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T883_SOYBN
Length = 412
Score = 79.3 bits (194), Expect = 2e-13
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 5/172 (2%)
Frame = +2
Query: 77 NSLD-----TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQ 241
NS+D +LR + W+ + + G++ G+N GG++ L GF+P Q
Sbjct: 156 NSIDDSLVLSLRSLQFDLAWERCRQLQAEDVTVKGKIVGVNKGGVVAELEGLRGFVPLSQ 215
Query: 242 LSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGD 421
+S N ++E +L L +K ++VDEE +LVLS +KA ++ + +G
Sbjct: 216 IS-------TNSNVEE----LLDKELPLKFVEVDEEQSRLVLSNRKAVAGNQAQ-LGIGS 263
Query: 422 IFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ G V S++ YGAF+++ + GL+H+S++S D V D+ L G+
Sbjct: 264 VVTGSVQSLKPYGAFIDIG------GINGLLHVSQISHDRVTDISTVLQPGD 309
[45][TOP]
>UniRef100_A9RWH7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWH7_PHYPA
Length = 397
Score = 79.3 bits (194), Expect = 2e-13
Identities = 45/163 (27%), Positives = 87/163 (53%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
+LR+ + W+ ++ G + NSGG ++ L GF+P+ Q+S +
Sbjct: 165 SLRKIQYDLCWERCAQMLADDVVVRGTILSHNSGGFVVDVEGLRGFVPFSQVSARGAQSN 224
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
P +++L + +K ++VDEE +LVLS +KA++++ +G + +G V +V
Sbjct: 225 P--------EELLNKEIPLKFLEVDEERTRLVLSNRKATFAENQSAFGIGSVVVGTVQTV 276
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ YGAF+++ ++GL+HIS++S D + V L+ G+
Sbjct: 277 KPYGAFIDIG------GVSGLLHISQISHDRLTTVETVLSPGD 313
[46][TOP]
>UniRef100_A9PE95 Predicted protein n=1 Tax=Populus trichocarpa RepID=A9PE95_POPTR
Length = 421
Score = 79.3 bits (194), Expect = 2e-13
Identities = 47/163 (28%), Positives = 82/163 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
+LR W+ + +I G+V G N GGL+ L GF+P+ Q+S
Sbjct: 165 SLRSIHYELAWERCRQLQAEDVIVKGKVVGGNKGGLVAVVEGLRGFVPFSQISS------ 218
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
+ +++L +K +DVDEE +L+LS +KA ++ + +G + G V S+
Sbjct: 219 -----KSTPEELLDKEFPLKFVDVDEEQSRLILSNRKAMADSQAQ-LGIGSVVTGTVQSL 272
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ YGAF+++ + GL+H+S++S D V D+ L G+
Sbjct: 273 KPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGD 309
[47][TOP]
>UniRef100_A9WHZ0 RNA binding S1 domain protein n=2 Tax=Chloroflexus
RepID=A9WHZ0_CHLAA
Length = 399
Score = 79.0 bits (193), Expect = 3e-13
Identities = 55/170 (32%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++ +AR+ W+A + G I RV+ N GGLL+ + GF+P Q+S + E
Sbjct: 115 SIDKARQEKSWRALQECYERGDIIYARVKNYNKGGLLVDLDGVRGFVPASQVSSISRVSE 174
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKA-SWSKYSKYVNL------GDIF 427
K E+A+ ++ L +KVI+++ +L+LSE++A ++ SK L GD+
Sbjct: 175 TQKQ-SEMAR-LVNVELPLKVIEINRNRNRLILSERQALVETRESKKDELLTSLREGDVR 232
Query: 428 IGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G V SV D+G FV++ D GL+H+SE+SW V+ + L G+
Sbjct: 233 DGVVSSVCDFGVFVDIGGAD------GLVHLSEISWSRVKHPGEVLKVGD 276
[48][TOP]
>UniRef100_B4FUZ5 30S ribosomal protein S1 n=1 Tax=Zea mays RepID=B4FUZ5_MAIZE
Length = 401
Score = 79.0 bits (193), Expect = 3e-13
Identities = 47/173 (27%), Positives = 90/173 (52%)
Frame = +2
Query: 59 QRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYP 238
+ P + +L+ ++ W+ + ++ G+V G N GG++ L GF+P+
Sbjct: 149 ENPGDETLILSLQAIQQELAWERCRQLQAEDVVVTGKVIGGNKGGVVALVDGLKGFVPFS 208
Query: 239 QLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLG 418
Q+S + A+++L L +K ++VDEE +LVLS +KA ++ + +G
Sbjct: 209 QVSS-----------KTTAEELLEKELPLKFVEVDEEQGRLVLSNRKAMADSQAQ-LGIG 256
Query: 419 DIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ +G V S++ YGAF+++ + GL+H+S++S D V D+ L G+
Sbjct: 257 SVVLGTVESLKPYGAFIDIG------GINGLLHVSQISHDRVADISTVLQPGD 303
[49][TOP]
>UniRef100_A0YL26 RNA binding S1 n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YL26_9CYAN
Length = 295
Score = 78.6 bits (192), Expect = 3e-13
Identities = 50/163 (30%), Positives = 82/163 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++RQ W N + + RV G+N GG+ + F SL GF+P LS
Sbjct: 95 SIRQLELEKVWDRLNESQQQAQSFQVRVTGMNRGGVTVDFDSLRGFIPRSHLSE------ 148
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
+E ++ +L+V ++++D + KLV S++ AS S + +G + G+V SV
Sbjct: 149 -----KEDLNSLIDQLLTVHILELDRDRNKLVFSQRLASESVSFGQLEVGQLIEGKVSSV 203
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ +G FV+L DG +TGLIHI EVS ++ + G+
Sbjct: 204 KPFGVFVDL---DG---VTGLIHIKEVSQKYIESLPTLFPVGQ 240
[50][TOP]
>UniRef100_Q7NLY2 30S ribosomal protein S1 n=1 Tax=Gloeobacter violaceus
RepID=Q7NLY2_GLOVI
Length = 320
Score = 77.4 bits (189), Expect = 7e-13
Identities = 45/163 (27%), Positives = 81/163 (49%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + ++ +N GG L+R L GF+P LS +E
Sbjct: 101 SIRRIEYMKAWERVRKLQTEDQTVRAKIFAVNRGGALVRIEGLRGFIPGSHLST----RE 156
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
P + +++G L +K ++VDEE +LVLS ++A + + G + IGRV +
Sbjct: 157 PKE-------ELIGEELPLKFLEVDEERNRLVLSHRRALVERRMNKLEAGQVVIGRVRGI 209
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ YGAF+++ ++GL+HISE+S D ++ G+
Sbjct: 210 KPYGAFIDIG------GVSGLLHISEISHDHIETPHSVFNVGD 246
[51][TOP]
>UniRef100_Q70DX8 Plastid ribosomal protein S1 n=1 Tax=Chlamydomonas reinhardtii
RepID=Q70DX8_CHLRE
Length = 436
Score = 77.4 bits (189), Expect = 7e-13
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 2/155 (1%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W+ ++ + VE +N GG+L++F GF+P Q P S N +
Sbjct: 218 WQRIRQLQEEDITVTVSVESVNKGGMLVKFGIYDGFIPVSQFGP--SITPDNM------E 269
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASW--SKYSKYVNLGDIFIGRVCSVEDYGAFVE 472
++G L VK ++VDEE+ +LV S K+AS S + +GD+ G V SV+ YGAF++
Sbjct: 270 SLVGFELQVKFLEVDEEAERLVFSHKRASSTVSNDIQGFKVGDVVAGVVQSVKPYGAFID 329
Query: 473 LRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
L +TGL+H+S++S D V + L +G+
Sbjct: 330 LG------GVTGLLHVSQISHDRVLVLDKILQEGD 358
[52][TOP]
>UniRef100_B9L032 30S ribosomal protein S1 n=1 Tax=Thermomicrobium roseum DSM 5159
RepID=B9L032_THERP
Length = 443
Score = 77.0 bits (188), Expect = 1e-12
Identities = 48/176 (27%), Positives = 89/176 (50%), Gaps = 7/176 (3%)
Frame = +2
Query: 71 APNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSP 250
A ++ ++ +AR+ W+ ++G + V N GGLL+ + GF+P Q+
Sbjct: 105 AGQAILSIDRARQEKTWRRLQEVFEAGGVIEAEVVNYNKGGLLVNLDGIRGFVPASQVVA 164
Query: 251 VHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKK-------ASWSKYSKYV 409
+ E +K Q M+G L +K+I+++ +L+LSE++ A ++ + +
Sbjct: 165 IRGGDEVSK--QADMARMVGQRLKLKIIEINRHRNRLILSERQAVQEQRDAMKAQLIETL 222
Query: 410 NLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G+ GRV S+ D+G FV++ D GL+H+SE+SW V+ + L G+
Sbjct: 223 REGETRRGRVTSIADFGVFVDIGGAD------GLVHLSEISWTRVKHPSEVLRVGD 272
[53][TOP]
>UniRef100_A9NYG1 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NYG1_PICSI
Length = 425
Score = 76.3 bits (186), Expect = 2e-12
Identities = 49/182 (26%), Positives = 92/182 (50%)
Frame = +2
Query: 32 IDEFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFY 211
I+E L + + + +L++ + W+ + ++ G+V N GGL +
Sbjct: 161 IEEHFMVLREDDTNSRMILSLQKIQCDLAWERCRQLQTEDVVVKGKVLSANKGGLNVLVE 220
Query: 212 SLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWS 391
L GF+P+ Q+S + +E ++ + +K ++VDEE +LVLS +KA
Sbjct: 221 CLRGFVPFSQISTKINIEE-----------LVNKEIPLKFMEVDEEQTRLVLSNRKAMAD 269
Query: 392 KYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTK 571
++ + +G + +G V +++ YGAFV+L + GL+H+S++S D V DV L
Sbjct: 270 SQAQ-LGIGSVVLGTVQTIKPYGAFVDLG------GINGLLHVSQISHDRVADVGTILQP 322
Query: 572 GE 577
G+
Sbjct: 323 GD 324
[54][TOP]
>UniRef100_C7HUB3 Putative uncharacterized protein n=1 Tax=Anaerococcus vaginalis
ATCC 51170 RepID=C7HUB3_9FIRM
Length = 691
Score = 75.9 bits (185), Expect = 2e-12
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
Frame = +2
Query: 80 SLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHS 259
SL T R+ +WK ++ G V G N GGL R + GF+P Q++P
Sbjct: 361 SLST-RRVEGMKNWKNLREAYENDQTVEGDVTGANKGGLTARVMGINGFVPASQIAPY-- 417
Query: 260 CKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKY---VNLGDIFI 430
+ K +G +K+I +DE +LVLS K K + + G +
Sbjct: 418 -------FVKNFKKFVGEHWDLKIISIDERKNRLVLSRKDIVEEKLDEQWDELEEGQVIT 470
Query: 431 GRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G+V + D+GAF+E+ L GL+H+S+++W V+ +D L G+
Sbjct: 471 GKVARLTDFGAFIEIG------SLDGLLHVSDIAWTRVEHPKDVLNIGD 513
Score = 63.5 bits (153), Expect = 1e-08
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDML--GSI 316
+ G + G+V + G + SL G L ++ E KD+L G
Sbjct: 464 EEGQVITGKVARLTDFGAFIEIGSLDGLLHVSDIAWTRV---------EHPKDVLNIGDD 514
Query: 317 LSVKVIDVDEESRKLVLSEKKASWSKYSKYVN---LGDIFIGRVCSVEDYGAFVELRFPD 487
+ VK++ +++E ++ L K+ ++++ N +GD+ G+V ++ D+GAFVE+ +
Sbjct: 515 IEVKILKLNKEKNRISLGRKQLLEKPFAEFTNEHEVGDVITGKVVNLLDFGAFVEVS--E 572
Query: 488 GLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G+ GLIH+SE+SWD V+ D L G+
Sbjct: 573 GV---EGLIHVSEISWDHVEKPSDELNVGD 599
[55][TOP]
>UniRef100_C0BXZ6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
15053 RepID=C0BXZ6_9CLOT
Length = 228
Score = 75.1 bits (183), Expect = 4e-12
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
Frame = +2
Query: 110 SSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQE 289
++ W Y + G + ++EGI +GG + L GF+P +LS + I++
Sbjct: 27 ANPWNVVKNYMEKGTVLPVKIEGIVNGGAIAMVEGLRGFIPASKLSLSY--------IED 78
Query: 290 IAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSK-------YVNLGDIFIGRVCSV 448
+ +L I V+VIDVD+ + +LVLS ++ K K V +G + G V S+
Sbjct: 79 LETYLLKDI-EVQVIDVDQANNRLVLSAREILKEKERKEKEAKIASVKIGSVVKGTVESL 137
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++YGAFV R DG L+GL+H+S++S V+ +D L G+
Sbjct: 138 QNYGAFV--RLEDG---LSGLVHVSQISQKRVKAPKDVLNTGD 175
[56][TOP]
>UniRef100_B4W413 S1 RNA binding domain protein n=1 Tax=Microcoleus chthonoplastes
PCC 7420 RepID=B4W413_9CYAN
Length = 299
Score = 75.1 bits (183), Expect = 4e-12
Identities = 45/182 (24%), Positives = 90/182 (49%), Gaps = 1/182 (0%)
Frame = +2
Query: 35 DEFDTALLQRPSAPNSLD-TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFY 211
+E + +++ +A + + RQ + W +DSG +V G+N GG+ + +
Sbjct: 82 EELEFLIIREQNAEGQITLSRRQLEINKIWDQLAQVQDSGKSLQVQVTGVNKGGVTIDWQ 141
Query: 212 SLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWS 391
L GF+P L+ + + ++G L+V +++ D + KLV S+++A+ +
Sbjct: 142 GLRGFIPRSHLNQRGNLES-----------LIGQSLTVSILEADRDRSKLVFSQREATRA 190
Query: 392 KYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTK 571
+ +G + G V ++ +G FVEL +TGL+HI +VS ++V+ + D
Sbjct: 191 ASFSMLEVGQLVEGTVSNIRPFGVFVELE------GITGLLHIKQVSQNMVESLTDMFEV 244
Query: 572 GE 577
G+
Sbjct: 245 GQ 246
[57][TOP]
>UniRef100_B0G3J0 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC
27755 RepID=B0G3J0_9FIRM
Length = 224
Score = 75.1 bits (183), Expect = 4e-12
Identities = 49/163 (30%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Frame = +2
Query: 110 SSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQE 289
++ W +Y + G + ++EGI +GG + + GF+P +LS + I++
Sbjct: 22 ANPWNVVQSYLEKGTVLPVKIEGIVNGGAIAMVEGIRGFIPASRLSLSY--------IED 73
Query: 290 IAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSK-------YVNLGDIFIGRVCSV 448
+ +L I V+VIDVD+ + +LVLS ++ K K + +G + G V S+
Sbjct: 74 LESYLLKDI-EVQVIDVDQANNRLVLSARELLKEKEKKEREEKIANIKVGSVLTGTVESL 132
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++YGAFV R DG L+GL+H+S++S ++ +D L G+
Sbjct: 133 QNYGAFV--RLEDG---LSGLVHVSQISQKRIKFPKDVLNVGD 170
[58][TOP]
>UniRef100_B6W7S9 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis
DSM 7454 RepID=B6W7S9_9FIRM
Length = 692
Score = 74.7 bits (182), Expect = 5e-12
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 3/164 (1%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+ +WK ++ G + G N GGL R + GF+P Q++P
Sbjct: 365 RRVEGMKNWKNLREAFENDQTVEGDITGSNKGGLTARVMGINGFVPASQIAPY------- 417
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKY---VNLGDIFIGRVCS 445
+ K +G +K+I +DE +LVLS K K + + G + G+V
Sbjct: 418 --FVKNFKKFVGEHWDLKIISIDERKNRLVLSRKDIVEEKLDEQWDELEEGQVITGKVAR 475
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ D+GAFVE+ L GL+H+S+++W V+ +D L G+
Sbjct: 476 LTDFGAFVEIG------SLDGLLHVSDIAWTRVEHPKDVLNIGD 513
Score = 62.8 bits (151), Expect = 2e-08
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDML--GSI 316
+ G + G+V + G + SL G L ++ E KD+L G
Sbjct: 464 EEGQVITGKVARLTDFGAFVEIGSLDGLLHVSDIAWTRV---------EHPKDVLNIGDD 514
Query: 317 LSVKVIDVDEESRKLVLSEKKASWSKYSKYVN---LGDIFIGRVCSVEDYGAFVELRFPD 487
+ VK++ +++E ++ L K+ ++++ N +GD+ G+V ++ D+GAFVE+ +
Sbjct: 515 IEVKILKLNKEKNRISLGRKQLLEKPFAEFTNNHEVGDVINGKVVNLLDFGAFVEVS--E 572
Query: 488 GLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G+ GLIH+SE+SW+ V+ D LT G+
Sbjct: 573 GV---EGLIHVSEISWEHVEKPSDELTVGD 599
[59][TOP]
>UniRef100_C1EEV9 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EEV9_9CHLO
Length = 387
Score = 74.7 bits (182), Expect = 5e-12
Identities = 49/182 (26%), Positives = 95/182 (52%), Gaps = 1/182 (0%)
Frame = +2
Query: 35 DEFDTALLQRPSAPNSLD-TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFY 211
+E++ +++ SL ++R+ + + W + + N V +N GGLL+
Sbjct: 135 EEYEFEIIRDDDGDGSLTLSVRKIQLEAAWNRCREMQANDEAVNSVVLSVNRGGLLVEVE 194
Query: 212 SLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWS 391
L GF+P ++ + PN+ +++G + VK ++VDEE +LV+S + A+
Sbjct: 195 HLRGFVPQSHIA----MRVPNRD------ELIGQSVPVKFLEVDEEKNRLVMSNRLATDV 244
Query: 392 KYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTK 571
+ + +GD+ G V +V+ YGAFV++ ++GL+HIS++S D + V + L
Sbjct: 245 VSGEGLGVGDVCKGVVQAVKPYGAFVDVG------GVSGLLHISQISHDRIVAVENVLAP 298
Query: 572 GE 577
G+
Sbjct: 299 GD 300
[60][TOP]
>UniRef100_C1E1D5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E1D5_9CHLO
Length = 294
Score = 74.7 bits (182), Expect = 5e-12
Identities = 53/149 (35%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYS--LMGFLPYPQLSPVHSCKEPNKPIQEIAKD-MLGS 313
+ G +GRVE N GGL+LR ++ FLP Q++ + + K +G
Sbjct: 5 EKGEPVSGRVEVANRGGLILRIFNGRFRAFLPLSQMTSSRTLDVKRSRKKNAPKSAQVGK 64
Query: 314 ILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
++ VKV DV++ +K+V+SE+ + K + G +V S+ D+GAFVEL D
Sbjct: 65 VIEVKVTDVND--KKIVVSERALVQERGVKRLKPGVRASAQVVSLSDFGAFVELSQDDPQ 122
Query: 494 Y-HLTGLIHISEVSWDLVQDVRDFLTKGE 577
L GLIHISE+SW V RD L G+
Sbjct: 123 APRLEGLIHISELSWSRVAHPRDILRVGD 151
[61][TOP]
>UniRef100_Q7V2Y7 30S ribosomal protein S1, homolog A n=1 Tax=Prochlorococcus marinus
subsp. pastoris str. CCMP1986 RepID=Q7V2Y7_PROMP
Length = 363
Score = 73.9 bits (180), Expect = 8e-12
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 148 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHISA----- 201
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
++I +D+ G L +K ++VDEE +LVLS ++A K + +G++ IG V
Sbjct: 202 ------RKIKEDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVIGSVKG 255
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFL 565
++ YGAF+++ ++GL+HISE+S + ++ + L
Sbjct: 256 IKPYGAFIDIG------GVSGLLHISEISHEHIETPHNVL 289
[62][TOP]
>UniRef100_A2BUU3 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. MIT 9515 RepID=A2BUU3_PROM5
Length = 363
Score = 73.6 bits (179), Expect = 1e-11
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 148 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHISA----- 201
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
++I +D+ G L +K ++VDEE +LVLS ++A K + +G++ +G V
Sbjct: 202 ------RKIKEDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKG 255
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFL 565
++ YGAF+++ ++GL+HISE+S + ++ + L
Sbjct: 256 IKPYGAFIDIG------GVSGLLHISEISHEHIETPHNVL 289
[63][TOP]
>UniRef100_C1MYF2 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MYF2_9CHLO
Length = 343
Score = 73.6 bits (179), Expect = 1e-11
Identities = 45/163 (27%), Positives = 88/163 (53%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ + + W + + + V +N GGLL+ L GF+P ++ +
Sbjct: 107 SVRKIQLEAAWNRCREMQAADEAVSAEVLSVNRGGLLVEVEHLRGFVPQSHIA----IRT 162
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
PN+ +D++G + VK ++VDE+ +LV+S + A+ + + +GD+ G V +V
Sbjct: 163 PNR------EDLIGQKVPVKFLEVDEDKNRLVMSNRLATDVVSGEGLGVGDVCKGIVQAV 216
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ YGAFV++ ++GL+HIS++S D + V + L+ G+
Sbjct: 217 KPYGAFVDVG------GVSGLLHISQISHDRIVAVENVLSPGD 253
[64][TOP]
>UniRef100_A8G3P5 Ribosomal protein S1 n=1 Tax=Prochlorococcus marinus str. MIT 9215
RepID=A8G3P5_PROM2
Length = 400
Score = 73.2 bits (178), Expect = 1e-11
Identities = 50/153 (32%), Positives = 75/153 (49%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W+ ++ +G + N + G N GGL L GF+P QL E + Q
Sbjct: 206 WEKVSSSAKNGELINVLINGFNRGGLTCDVDGLRGFIPRSQL-------EDGQDYQSF-- 256
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
+G L V ++V+ ESRKLVLSEKKAS + LG + G V +V+ YG F++L
Sbjct: 257 --VGKTLKVAFLEVNPESRKLVLSEKKASLVSKLTNLELGQLIEGEVLAVKPYGFFIDLG 314
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
GL H + L + S ++ +R+ +GE
Sbjct: 315 GASGLLHQSSLTNGS------IRSLREVFREGE 341
[65][TOP]
>UniRef100_A3PBQ4 30S ribosomal protein S1-like protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9301
RepID=A3PBQ4_PROM0
Length = 401
Score = 73.2 bits (178), Expect = 1e-11
Identities = 50/153 (32%), Positives = 75/153 (49%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W+ ++ +G + N + G N GGL L GF+P QL E + Q
Sbjct: 207 WEKVSSSAKNGELINVLINGFNRGGLTCDVDGLRGFIPRSQL-------EDGQDYQSF-- 257
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
+G L V ++V+ ESRKLVLSEKKAS + LG + G V +V+ YG F++L
Sbjct: 258 --VGKTLKVAFLEVNPESRKLVLSEKKASLVSKLTSLELGQLIEGEVLAVKPYGFFIDLG 315
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
GL H + L + S ++ +R+ +GE
Sbjct: 316 GASGLLHQSSLTNGS------IRSLREVFREGE 342
[66][TOP]
>UniRef100_A3PB35 30S ribosomal protein S1-like protein A n=1 Tax=Prochlorococcus
marinus str. MIT 9301 RepID=A3PB35_PROM0
Length = 363
Score = 73.2 bits (178), Expect = 1e-11
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 1/160 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 148 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHISA----- 201
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
++I D+ G L +K ++VDEE +LVLS ++A K + +G++ +G V
Sbjct: 202 ------RKIKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGNVKG 255
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFL 565
++ YGAF+++ ++GL+HISE+S + ++ + L
Sbjct: 256 IKPYGAFIDIG------GVSGLLHISEISHEHIETPHNVL 289
[67][TOP]
>UniRef100_B9P0S4 RNA binding S1 n=1 Tax=Prochlorococcus marinus str. MIT 9202
RepID=B9P0S4_PROMA
Length = 401
Score = 73.2 bits (178), Expect = 1e-11
Identities = 50/153 (32%), Positives = 75/153 (49%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W+ ++ +G + N + G N GGL L GF+P QL E + Q
Sbjct: 207 WEKVSSSAKNGELINVLINGFNRGGLTCDVDGLRGFIPRSQL-------EDGQDYQSF-- 257
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
+G L V ++V+ ESRKLVLSEKKAS + LG + G V +V+ YG F++L
Sbjct: 258 --VGKTLKVAFLEVNPESRKLVLSEKKASLVSKLTSLELGQLIEGEVLAVKPYGFFIDLG 315
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
GL H + L + S ++ +R+ +GE
Sbjct: 316 GASGLLHQSSLTNGS------IRSLREVFREGE 342
[68][TOP]
>UniRef100_A8G2X3 Ribosomal protein S1 n=1 Tax=Prochlorococcus marinus str. MIT 9215
RepID=A8G2X3_PROM2
Length = 363
Score = 72.8 bits (177), Expect = 2e-11
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 1/160 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 148 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHISA----- 201
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
++I D+ G L +K ++VDEE +LVLS ++A K + +G++ +G V
Sbjct: 202 ------RKIKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKG 255
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFL 565
++ YGAF+++ ++GL+HISE+S + ++ + L
Sbjct: 256 IKPYGAFIDIG------GVSGLLHISEISHEHIETPHNVL 289
[69][TOP]
>UniRef100_Q1PL50 30S ribosomal protein S1 A n=1 Tax=uncultured Prochlorococcus
marinus clone ASNC2150 RepID=Q1PL50_PROMA
Length = 363
Score = 72.8 bits (177), Expect = 2e-11
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 1/160 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 148 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHISA----- 201
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
++I D+ G L +K ++VDEE +LVLS ++A K + +G++ +G V
Sbjct: 202 ------RKIKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKG 255
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFL 565
++ YGAF+++ ++GL+HISE+S + ++ + L
Sbjct: 256 IKPYGAFIDIG------GVSGLLHISEISHEHIETPHNVL 289
[70][TOP]
>UniRef100_Q1PKI2 30S ribosomal protein S1 A n=1 Tax=uncultured Prochlorococcus
marinus clone ASNC729 RepID=Q1PKI2_PROMA
Length = 363
Score = 72.8 bits (177), Expect = 2e-11
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 1/160 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 148 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHISA----- 201
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
++I D+ G L +K ++VDEE +LVLS ++A K + +G++ +G V
Sbjct: 202 ------RKIKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKG 255
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFL 565
++ YGAF+++ ++GL+HISE+S + ++ + L
Sbjct: 256 IKPYGAFIDIG------GVSGLLHISEISHEHIETPHNVL 289
[71][TOP]
>UniRef100_B9P029 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. MIT 9202 RepID=B9P029_PROMA
Length = 363
Score = 72.8 bits (177), Expect = 2e-11
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 1/160 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 148 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHISA----- 201
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
++I D+ G L +K ++VDEE +LVLS ++A K + +G++ +G V
Sbjct: 202 ------RKIKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKG 255
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFL 565
++ YGAF+++ ++GL+HISE+S + ++ + L
Sbjct: 256 IKPYGAFIDIG------GVSGLLHISEISHEHIETPHNVL 289
[72][TOP]
>UniRef100_B8C8K9 RS1, ribosomal protein 1 (Fragment) n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C8K9_THAPS
Length = 287
Score = 72.8 bits (177), Expect = 2e-11
Identities = 46/165 (27%), Positives = 84/165 (50%)
Frame = +2
Query: 83 LDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSC 262
L ++R+ + W A +DS ++ +N GG + L FLP L+
Sbjct: 89 LVSIRRIQYREAWDKVIAKQDSDEVFEAECVSVNRGGAIFLVEGLRAFLPGSHLTG---- 144
Query: 263 KEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVC 442
+ P+ D++G L +K ++V++E KLV+S ++A + ++ GD+ G V
Sbjct: 145 RLPDD-------DLVGQTLPLKFLEVNQEDNKLVVSNRRAVVEEQMAELSRGDVIDGIVK 197
Query: 443 SVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+++ YGAFVE+ ++GL+HIS++S D + D+ L G+
Sbjct: 198 ALKPYGAFVEVG------GMSGLLHISQISMDRITDLEQVLQPGQ 236
[73][TOP]
>UniRef100_B7FU58 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FU58_PHATR
Length = 284
Score = 72.8 bits (177), Expect = 2e-11
Identities = 45/164 (27%), Positives = 84/164 (51%)
Frame = +2
Query: 83 LDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSC 262
L ++++ W+ + + I +V +N GG + L FLP L+
Sbjct: 89 LVSIKRIEYKKAWEKVLSMAEEDQILEAKVIAVNRGGAICLVEGLRAFLPGSHLTG---- 144
Query: 263 KEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVC 442
Q +D++G+ L +K ++V++E+ KLV+S +KA + ++ GD+ G V
Sbjct: 145 -------QLPDEDLIGNNLQLKFLEVNQETNKLVVSNRKAVVEQQMADLSRGDLVAGMVK 197
Query: 443 SVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKG 574
+++ YGAFVE+ ++GL+HIS++S+D + D+ L G
Sbjct: 198 ALKPYGAFVEVG------GMSGLLHISQISYDRIDDLEKVLQPG 235
[74][TOP]
>UniRef100_B1XJQ5 30S ribosomal protein S1 like protein n=1 Tax=Synechococcus sp. PCC
7002 RepID=B1XJQ5_SYNP2
Length = 296
Score = 72.4 bits (176), Expect = 2e-11
Identities = 45/153 (29%), Positives = 80/153 (52%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W+ ++G RV G N GG+ L GF+P L + +
Sbjct: 107 WEDLAQAAEAGNSVQMRVTGSNRGGVTGDIQGLRGFIPNSHL------------VDKNID 154
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
D++G +L+V ++ D+E RKLVLS++ A+ ++ + +++G + G V +++ YG FVEL
Sbjct: 155 DLMGQLLTVNFLEFDQERRKLVLSQRYAAQAEVMRRLSIGALVSGTVVNIKPYGVFVEL- 213
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
DG +TGL+H S++S V+ + + G+
Sbjct: 214 --DG---MTGLLHRSQISAKPVEQIEALFSIGQ 241
[75][TOP]
>UniRef100_B1X069 30S ribosomal protein S1 n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1X069_CYAA5
Length = 359
Score = 72.4 bits (176), Expect = 2e-11
Identities = 43/150 (28%), Positives = 74/150 (49%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 122 SIRRIEYMRAWERVRQLQAEDATVRSNVFATNRGGALVRIEGLRGFIPGSHIST------ 175
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
+E +D++G L +K ++VDEE +LVLS ++A + + +G + IG V +
Sbjct: 176 -----REAKEDLVGEELPLKFLEVDEERNRLVLSHRRALVERKMNGLEVGQVVIGSVRGI 230
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 231 KPYGAFIDIG------GVSGLLHISEISHD 254
[76][TOP]
>UniRef100_A2BPB3 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. AS9601 RepID=A2BPB3_PROMS
Length = 363
Score = 72.4 bits (176), Expect = 2e-11
Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 148 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHISA----- 201
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
+ I D+ G L +K ++VDEE +LVLS ++A K + +G++ +G V
Sbjct: 202 ------RRIKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKG 255
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFL 565
++ YGAF+++ ++GL+HISE+S + ++ + L
Sbjct: 256 IKPYGAFIDIG------GVSGLLHISEISHEHIETPHNVL 289
[77][TOP]
>UniRef100_A3YYV2 30S ribosomal protein S1-like B, putative n=1 Tax=Synechococcus sp.
WH 5701 RepID=A3YYV2_9SYNE
Length = 403
Score = 72.4 bits (176), Expect = 2e-11
Identities = 44/153 (28%), Positives = 81/153 (52%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W+ + +G + +V G N GG+ L GF+P QL E +
Sbjct: 208 WEKVKQLEAAGKVVQVKVSGFNRGGVTCDLEGLRGFIPRSQLQN-----------GENHE 256
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G+ +V ++V+ ++RKLVLSEK+A+ + + +G + G+V SV+ YG FV+L
Sbjct: 257 QLVGTSFAVAFLEVNADTRKLVLSEKRAASASLLAELEVGQLVDGQVVSVKPYGFFVDLG 316
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++D+R+ ++GE
Sbjct: 317 ------GVSGLLHQSSITGVHLRDIREAFSQGE 343
[78][TOP]
>UniRef100_A3ITQ5 30S ribosomal protein S1 n=1 Tax=Cyanothece sp. CCY0110
RepID=A3ITQ5_9CHRO
Length = 365
Score = 72.4 bits (176), Expect = 2e-11
Identities = 43/150 (28%), Positives = 74/150 (49%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 128 SIRRIEYMRAWERVRQLQAEDATVRSNVFATNRGGALVRIEGLRGFIPGSHIST------ 181
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
+E +D++G L +K ++VDEE +LVLS ++A + + +G + IG V +
Sbjct: 182 -----REAKEDLVGEELPLKFLEVDEERNRLVLSHRRALVERKMNGLEVGQVVIGSVRGI 236
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 237 KPYGAFIDIG------GVSGLLHISEISHD 260
[79][TOP]
>UniRef100_Q01DM0 30S ribosomal protein S1 (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q01DM0_OSTTA
Length = 250
Score = 72.4 bits (176), Expect = 2e-11
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Frame = +2
Query: 38 EFDTALLQRPSAPNSLD-TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYS 214
E+D ++Q + L ++R+ + W + G V +N GGLL+
Sbjct: 19 EYDFEVIQDDNGEGCLTLSVRRMELAKAWDRCREAQAEDAALTGEVLSVNRGGLLVEVEK 78
Query: 215 LMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSK 394
L GF+P + + N+ ++++G L K I+VDEE +LVLS + A+
Sbjct: 79 LRGFVPQSHIG----IRTLNR------EELVGQQLPFKFIEVDEEKNRLVLSHRLATDMV 128
Query: 395 YSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKG 574
++ + +GD+ G V +V+ YGAFV++ +GL+HIS++S + + V + L+ G
Sbjct: 129 SAEGLEVGDVVEGMVQAVKPYGAFVDVG------GQSGLLHISQISHERIVAVENVLSAG 182
Query: 575 E 577
+
Sbjct: 183 D 183
[80][TOP]
>UniRef100_Q31CL6 SSU ribosomal protein S1P n=1 Tax=Prochlorococcus marinus str. MIT
9312 RepID=Q31CL6_PROM9
Length = 366
Score = 72.0 bits (175), Expect = 3e-11
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 151 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHISA----- 204
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
+ + D+ G L +K ++VDEE +LVLS ++A K + +G++ +G V
Sbjct: 205 ------RRVKDDLEGEYLPLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKG 258
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFL 565
++ YGAF+++ ++GL+HISE+S + ++ + L
Sbjct: 259 IKPYGAFIDIG------GVSGLLHISEISHEHIETPHNVL 292
[81][TOP]
>UniRef100_Q10VU3 SSU ribosomal protein S1P n=1 Tax=Trichodesmium erythraeum IMS101
RepID=Q10VU3_TRIEI
Length = 390
Score = 72.0 bits (175), Expect = 3e-11
Identities = 44/153 (28%), Positives = 77/153 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + +V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQAEDATVRSQVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
KP +D+L L +K ++VDEE +LVLS ++A + + +G++ IG V +
Sbjct: 153 -RKP----KEDLLNEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGAVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
+ YGAF+++ ++GL+HISE+S D ++
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEISHDHIE 234
[82][TOP]
>UniRef100_B0BZ86 30S ribosomal protein S1 n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0BZ86_ACAM1
Length = 325
Score = 72.0 bits (175), Expect = 3e-11
Identities = 44/150 (29%), Positives = 75/150 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S + KE
Sbjct: 99 SIRRIEYMRAWERVRQLQTEDATVRSSVFATNRGGALVRIEGLRGFIPGSHIS-TRATKE 157
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
D++G L +K ++VDEE +LVLS ++A + + +G++ IG V +
Sbjct: 158 ----------DLIGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEISHD 231
[83][TOP]
>UniRef100_A2BQ11 30S ribosomal protein S1 protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. AS9601
RepID=A2BQ11_PROMS
Length = 401
Score = 72.0 bits (175), Expect = 3e-11
Identities = 55/157 (35%), Positives = 78/157 (49%)
Frame = +2
Query: 107 RSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQ 286
R S K +N+ K+ LI N + G N GGL L GF+P QL E + Q
Sbjct: 204 RQSWEKVSNSAKNGELI-NVLINGFNRGGLTCDVDGLRGFIPRSQL-------EDGQDYQ 255
Query: 287 EIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAF 466
+G L V ++V+ ESRKLVLSEKKAS + LG + G V +V+ YG F
Sbjct: 256 SF----VGKNLKVAFLEVNPESRKLVLSEKKASLVSKLTSLELGQLIEGEVLAVKPYGFF 311
Query: 467 VELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++L GL H + L + S ++ +R+ +GE
Sbjct: 312 IDLGGASGLLHQSSLTNGS------IRSLREVFREGE 342
[84][TOP]
>UniRef100_C7QTB9 RNA binding S1 domain protein n=2 Tax=Cyanothece RepID=C7QTB9_CYAP0
Length = 331
Score = 72.0 bits (175), Expect = 3e-11
Identities = 42/150 (28%), Positives = 74/150 (49%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 100 SIRRIEYMRAWERVRQLQAEDATVRSNVFATNRGGALVRIEGLRGFIPGSHIST------ 153
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
+E +D++G L +K ++VDEE +LVLS ++A + + +G + +G V +
Sbjct: 154 -----REAKEDLVGEELPLKFLEVDEERNRLVLSHRRALVERKMNGLEVGQVVVGSVRGI 208
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 209 KPYGAFIDIG------GVSGLLHISEISHD 232
[85][TOP]
>UniRef100_C4FR40 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC
17748 RepID=C4FR40_9FIRM
Length = 632
Score = 72.0 bits (175), Expect = 3e-11
Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 10/191 (5%)
Frame = +2
Query: 35 DEFDTALLQRPSAPNSLD-TLRQARRSSDWKAA--NAYKDSGLIYNGRVEGINSGGLLLR 205
DE ++ N + ++ + + DW+ KD ++ G ++ I +G L++
Sbjct: 339 DEIKAVIMNHIKEDNPIYLSMTRLAKDEDWQYVIEAQEKDEAIVCKG-IDAIPAG-LVVT 396
Query: 206 FYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLS----- 370
SL GF+P Q VH K + +++G+ KV+++DE+ +LVLS
Sbjct: 397 VKSLRGFIPLSQ-GDVHFVKSLD--------NLVGTEFEAKVLEIDEKKNRLVLSRRAVL 447
Query: 371 --EKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLV 544
E++A ++ K +N+GD + G V + YGAFV++ + GL+HIS++SW +
Sbjct: 448 EVERQAKLAEALKNINVGDNYKGIVRKIMPYGAFVDIG------GIEGLLHISDISWQKI 501
Query: 545 QDVRDFLTKGE 577
+ V D L+ G+
Sbjct: 502 KKVEDVLSVGQ 512
Score = 54.7 bits (130), Expect = 5e-06
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 7/187 (3%)
Frame = +2
Query: 38 EFDTALLQRPSAPNSLDTLRQARRSSDWKA--ANAYKDS--GLIYNGRVEGINSGGLLLR 205
EF+ +L+ N L R+A + +A A A K+ G Y G V I G +
Sbjct: 424 EFEAKVLEIDEKKNRLVLSRRAVLEVERQAKLAEALKNINVGDNYKGIVRKIMPYGAFVD 483
Query: 206 FYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK--- 376
+ G L +S + K ++++ +G + VK+ D ES KL LS K
Sbjct: 484 IGGIEGLLHISDIS-----WQKIKKVEDVLS--VGQEIEVKLQSFDAESNKLSLSLKALS 536
Query: 377 KASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVR 556
K+ W + +++GD+ G+V + YGAFV + + GL+HIS+++ V
Sbjct: 537 KSPWDVAEETLHVGDVINGKVVRLVAYGAFVAVN-----DDIQGLLHISQITKQRNAKVE 591
Query: 557 DFLTKGE 577
D+L +G+
Sbjct: 592 DYLNRGQ 598
[86][TOP]
>UniRef100_Q4C2K3 RNA binding S1 n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C2K3_CROWT
Length = 345
Score = 71.6 bits (174), Expect = 4e-11
Identities = 43/150 (28%), Positives = 74/150 (49%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQAEDATVRSDVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
+E +D++G L +K ++VDEE +LVLS ++A + + +G + IG V +
Sbjct: 153 -----REAKEDLVGEQLPLKFLEVDEERNRLVLSHRRALVERKMNGLEVGQVVIGSVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEISHD 231
[87][TOP]
>UniRef100_B5ILL4 Putative uncharacterized protein n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5ILL4_9CHRO
Length = 422
Score = 71.6 bits (174), Expect = 4e-11
Identities = 46/153 (30%), Positives = 78/153 (50%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W+ + G + +V G N GG+ L GF+P QL E +
Sbjct: 227 WEKVRVLEKEGKVVQVKVNGFNRGGVTCDLEGLRGFIPRSQLQE-----------GENHE 275
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V ++V+ E+RKLVLSEK+A+ + + +G + G V S++ YG FV+L
Sbjct: 276 ALVGKTLGVTFLEVNPETRKLVLSEKRAATAARFAELEVGQLVEGVVASIKPYGFFVDLG 335
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S V+ ++D+R+ ++GE
Sbjct: 336 ------GISGLLHHSCVTGAELRDLREAFSQGE 362
[88][TOP]
>UniRef100_P46228 30S ribosomal protein S1 n=2 Tax=Synechococcus elongatus
RepID=RS1_SYNP6
Length = 307
Score = 71.6 bits (174), Expect = 4e-11
Identities = 40/153 (26%), Positives = 77/153 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQTEDATVRSEVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
++ +D++G L +K ++VDE+ +LVLS ++A + + +G++ +G V +
Sbjct: 153 -----RKAKEDLVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVVGAVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
+ YGAF+++ ++GL+HISE+S D ++
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEISHDHIE 234
[89][TOP]
>UniRef100_Q31C04 SSU ribosomal protein S1P n=1 Tax=Prochlorococcus marinus str. MIT
9312 RepID=Q31C04_PROM9
Length = 404
Score = 71.2 bits (173), Expect = 5e-11
Identities = 53/157 (33%), Positives = 80/157 (50%)
Frame = +2
Query: 107 RSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQ 286
R S K +N+ K+ LI + + G N GGL L GF+P QL E + Q
Sbjct: 207 RQSWEKVSNSAKNGELI-DVLINGFNRGGLTCDVDGLRGFIPRSQL-------EDGQDYQ 258
Query: 287 EIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAF 466
+G L V ++V+ ESRKLVLSEKKAS ++LG + G V +V+ YG F
Sbjct: 259 SF----VGKTLKVAFLEVNPESRKLVLSEKKASLVSKLTSLDLGQLIEGEVLAVKPYGFF 314
Query: 467 VELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++L +GL+H S ++ ++ +R+ +GE
Sbjct: 315 IDLG------GASGLLHQSSLTKGSIRSLREIFREGE 345
[90][TOP]
>UniRef100_B7KFG6 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7424
RepID=B7KFG6_CYAP7
Length = 328
Score = 71.2 bits (173), Expect = 5e-11
Identities = 42/150 (28%), Positives = 74/150 (49%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 100 SIRRIEYMRAWERVRQLQTEDATVRSSVFATNRGGALVRIEGLRGFIPGSHIST------ 153
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
+E +D++G L +K ++VDE+ +LVLS ++A + + +G + IG V +
Sbjct: 154 -----REAKEDLVGQDLPLKFLEVDEDRNRLVLSHRRALVERKMNGLEVGQVVIGSVRGI 208
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 209 KPYGAFIDIG------GVSGLLHISEISHD 232
[91][TOP]
>UniRef100_C7RHT6 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Anaerococcus
prevotii DSM 20548 RepID=C7RHT6_ANAPD
Length = 686
Score = 71.2 bits (173), Expect = 5e-11
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Frame = +2
Query: 35 DEFDTALLQRPSAPNSLD-TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFY 211
DE D +++ ++ + R+ WK ++ + +G V G N GGL +
Sbjct: 344 DEIDVFVIKLDDGEGNVSLSTRRVEGMKVWKDLAEKAENDELVHGVVSGFNKGGLTVNVE 403
Query: 212 SLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWS 391
+ GF+P Q++ + K +G +K+I +DE +LVLS K+
Sbjct: 404 GINGFVPASQIATY---------FVKNFKKFVGEEWDLKIISIDERKNRLVLSRKEVVED 454
Query: 392 KYS---KYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDF 562
+ + + G + G+V + D+GAFVE+ L GL+H+S+++W V+ D
Sbjct: 455 ELDGLWEELEEGQVVTGKVARLTDFGAFVEVN------GLDGLLHVSDIAWSRVEHPSDV 508
Query: 563 LTKGE 577
L G+
Sbjct: 509 LNVGD 513
Score = 60.5 bits (145), Expect = 9e-08
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 3/184 (1%)
Frame = +2
Query: 35 DEFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYS 214
+E+D ++ N L R+ + + G + G+V + G +
Sbjct: 428 EEWDLKIISIDERKNRLVLSRKEVVEDELDGLWEELEEGQVVTGKVARLTDFGAFVEVNG 487
Query: 215 LMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSK 394
L G L ++ + P+ + +G + VK++ +++E ++ L K+
Sbjct: 488 LDGLLHVSDIA-WSRVEHPSDVLN------VGDEIEVKILKLNQEKNRISLGRKQLLEKP 540
Query: 395 YSKYVN---LGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFL 565
+ +VN +GD+ G+V ++ D+GAFVE+ DG+ GL+H+SE+SW+ V+ D L
Sbjct: 541 FEAFVNQHEVGDVVTGKVVNLLDFGAFVEVA--DGV---EGLVHVSEISWEHVEKPSDEL 595
Query: 566 TKGE 577
G+
Sbjct: 596 NVGD 599
[92][TOP]
>UniRef100_A3ZTD7 30S ribosomal protein S1 n=1 Tax=Blastopirellula marina DSM 3645
RepID=A3ZTD7_9PLAN
Length = 536
Score = 71.2 bits (173), Expect = 5e-11
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Frame = +2
Query: 149 GLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVK 328
G++ + V+G+N GGL GF+P Q++P H +D LG L
Sbjct: 242 GILVDAVVDGVNKGGLECAVGQARGFIPASQIAPHHVTN---------MEDYLGQKLQCL 292
Query: 329 VIDVDEESRKLVLS-----EKKASWSKYSKYVNL--GDIFIGRVCSVEDYGAFVELRFPD 487
V + + E R LVLS EK S+ V L G + G V ++D+GAFV++ D
Sbjct: 293 VTEANPERRNLVLSARAVAEKAKEDSRKETMVTLQVGQMRDGTVTRLQDFGAFVDIGGVD 352
Query: 488 GLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
GL+H+S++SWD V+ D L++G+
Sbjct: 353 ------GLVHVSQISWDRVKHPSDALSEGQ 376
Score = 54.3 bits (129), Expect = 7e-06
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Frame = +2
Query: 149 GLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVK 328
G + +G V + G + + G + Q+S K P+ + E G + VK
Sbjct: 329 GQMRDGTVTRLQDFGAFVDIGGVDGLVHVSQIS-WDRVKHPSDALSE------GQAVRVK 381
Query: 329 VIDVDEESRKLVLSEKKA---SWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYH 499
V +D E+ K+ LS + W K ++ ++G I G+V + D+GAFVE+
Sbjct: 382 VTKIDPETGKIGLSIRDTLENPWQKVAEEFSVGAIINGKVTKIMDFGAFVEI-----APG 436
Query: 500 LTGLIHISEVSWDLVQDVRDFLTKGE 577
+ GL+H+SEVS V + L GE
Sbjct: 437 IEGLVHVSEVSHTRVSRIESVLKAGE 462
[93][TOP]
>UniRef100_A6N017 30S ribosomal protein S1 (Fragment) n=1 Tax=Oryza sativa Indica
Group RepID=A6N017_ORYSI
Length = 217
Score = 71.2 bits (173), Expect = 5e-11
Identities = 42/134 (31%), Positives = 74/134 (55%)
Frame = +2
Query: 176 GINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESR 355
G N GG++ L GF+P+ Q+S + A+++L L +K ++VDEE
Sbjct: 2 GGNKGGVVALVEGLKGFVPFSQVSS-----------KSTAEELLDKELPLKFVEVDEEQG 50
Query: 356 KLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSW 535
+LVLS +KA ++ + +G + +G V S++ YGAF+++ + GL+H+S++S
Sbjct: 51 RLVLSNRKAMADSQAQ-LGIGSVVLGTVESLKPYGAFIDIG------GINGLLHVSQISH 103
Query: 536 DLVQDVRDFLTKGE 577
D V D+ L G+
Sbjct: 104 DRVADISTVLQPGD 117
[94][TOP]
>UniRef100_Q7V5A4 30S ribosomal protein S1, homolog A n=1 Tax=Prochlorococcus marinus
str. MIT 9313 RepID=Q7V5A4_PROMM
Length = 367
Score = 70.9 bits (172), Expect = 7e-11
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 154 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 207
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
KP +E+ D L +K ++VDEE +LVLS ++A + + +G++ IG V
Sbjct: 208 --RKPKEELVADFL----PLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGAVRG 261
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 262 IKPYGAFIDIG------GVSGLLHISEISHEHIE 289
[95][TOP]
>UniRef100_B0JTB0 30S ribosomal protein S1 n=1 Tax=Microcystis aeruginosa NIES-843
RepID=B0JTB0_MICAN
Length = 330
Score = 70.9 bits (172), Expect = 7e-11
Identities = 42/150 (28%), Positives = 74/150 (49%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQKEDATVRSNVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
+E +D++G L +K ++VDE+ +LVLS ++A + + +G + IG V +
Sbjct: 153 -----REAKEDLVGQELPLKFLEVDEDRNRLVLSHRRALVERKMNGLAVGQVVIGSVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEISHD 231
[96][TOP]
>UniRef100_A2CBU1 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. MIT 9303 RepID=A2CBU1_PROM3
Length = 367
Score = 70.9 bits (172), Expect = 7e-11
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 154 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 207
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
KP +E+ D L +K ++VDEE +LVLS ++A + + +G++ IG V
Sbjct: 208 --RKPKEELVADFL----PLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGAVRG 261
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 262 IKPYGAFIDIG------GVSGLLHISEISHEHIE 289
[97][TOP]
>UniRef100_Q05Q21 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. RS9916
RepID=Q05Q21_9SYNE
Length = 359
Score = 70.9 bits (172), Expect = 7e-11
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 147 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 200
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
KP +E+ D L +K ++VDEE +LVLS ++A + + +G++ IG V
Sbjct: 201 --RKPKEELVADFL----PLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRG 254
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 255 IKPYGAFIDIG------GVSGLLHISEISHEHIE 282
[98][TOP]
>UniRef100_A8YI09 Genome sequencing data, contig C316 n=1 Tax=Microcystis aeruginosa
PCC 7806 RepID=A8YI09_MICAE
Length = 330
Score = 70.9 bits (172), Expect = 7e-11
Identities = 42/150 (28%), Positives = 74/150 (49%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQKEDATVRSNVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
+E +D++G L +K ++VDE+ +LVLS ++A + + +G + IG V +
Sbjct: 153 -----REAKEDLVGQELPLKFLEVDEDRNRLVLSHRRALVERKMNGLAVGQVVIGSVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEISHD 231
[99][TOP]
>UniRef100_A3Z943 RNA binding S1 n=1 Tax=Synechococcus sp. RS9917 RepID=A3Z943_9SYNE
Length = 369
Score = 70.9 bits (172), Expect = 7e-11
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 157 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 210
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
KP +E+ D L +K ++VDEE +LVLS ++A + + +G++ IG V
Sbjct: 211 --RKPKEELVADFL----PLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRG 264
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 265 IKPYGAFIDIG------GVSGLLHISEISHEHIE 292
[100][TOP]
>UniRef100_Q3AWE8 SSU ribosomal protein S1P n=1 Tax=Synechococcus sp. CC9902
RepID=Q3AWE8_SYNS9
Length = 367
Score = 70.5 bits (171), Expect = 9e-11
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 154 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 207
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
KP +E+ D L +K ++VDEE +LVLS ++A + + +G++ +G V
Sbjct: 208 --RKPKEELVADFL----PLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVRG 261
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 262 IKPYGAFIDIG------GVSGLLHISEISHEHIE 289
[101][TOP]
>UniRef100_Q3AME0 RNA binding S1 n=1 Tax=Synechococcus sp. CC9605 RepID=Q3AME0_SYNSC
Length = 386
Score = 70.5 bits (171), Expect = 9e-11
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 173 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 226
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
KP +E+ D L +K ++VDEE +LVLS ++A + + +G++ +G V
Sbjct: 227 --RKPKEELVADFL----PLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVRG 280
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 281 IKPYGAFIDIG------GVSGLLHISEISHEHIE 308
[102][TOP]
>UniRef100_Q0ICR5 Ribosomal protein S1 n=1 Tax=Synechococcus sp. CC9311
RepID=Q0ICR5_SYNS3
Length = 305
Score = 70.5 bits (171), Expect = 9e-11
Identities = 44/136 (32%), Positives = 74/136 (54%)
Frame = +2
Query: 140 KDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSIL 319
K+ IY+ V N GG L+R L GF+P +S KP +E+ D L
Sbjct: 110 KEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST-------RKPKEELVADFL---- 157
Query: 320 SVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYH 499
+K ++VDEE +LVLS ++A + + +G++ IG V ++ YGAF+++
Sbjct: 158 PLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGIKPYGAFIDIG------G 211
Query: 500 LTGLIHISEVSWDLVQ 547
++GL+HISE+S + ++
Sbjct: 212 VSGLLHISEISHEHIE 227
[103][TOP]
>UniRef100_B8HVN0 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7425
RepID=B8HVN0_CYAP4
Length = 321
Score = 70.5 bits (171), Expect = 9e-11
Identities = 42/150 (28%), Positives = 74/150 (49%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQAEDATVRSAVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
+ +D++G L +K ++VDEE +LVLS ++A + + +G++ IG V +
Sbjct: 153 -----RVTKEDLVGEELPLKFLEVDEERNRLVLSHRRALVERKMNKLEVGEVVIGTVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEISHD 231
[104][TOP]
>UniRef100_Q05Z68 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. BL107
RepID=Q05Z68_9SYNE
Length = 367
Score = 70.5 bits (171), Expect = 9e-11
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 154 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 207
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
KP +E+ D L +K ++VDEE +LVLS ++A + + +G++ +G V
Sbjct: 208 --RKPKEELVADFL----PLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVRG 261
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 262 IKPYGAFIDIG------GVSGLLHISEISHEHIE 289
[105][TOP]
>UniRef100_D0CJU6 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CJU6_9SYNE
Length = 363
Score = 70.5 bits (171), Expect = 9e-11
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 150 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 203
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
KP +E+ D L +K ++VDEE +LVLS ++A + + +G++ +G V
Sbjct: 204 --RKPKEELVADFL----PLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVRG 257
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 258 IKPYGAFIDIG------GVSGLLHISEISHEHIE 285
[106][TOP]
>UniRef100_C2AWN0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal
protein S1P n=1 Tax=Veillonella parvula DSM 2008
RepID=C2AWN0_9FIRM
Length = 632
Score = 70.5 bits (171), Expect = 9e-11
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 10/191 (5%)
Frame = +2
Query: 35 DEFDTALLQRPSAPNSLD-TLRQARRSSDWKAA--NAYKDSGLIYNGRVEGINSGGLLLR 205
DE ++ N + ++ + + DW+ KD ++ G ++ I +G L++
Sbjct: 339 DEIKAVIMNHIKEDNPIYLSMTRLAKDEDWQYVIEAQEKDEAIVCKG-IDAIPAG-LVVT 396
Query: 206 FYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLS----- 370
SL GF+P Q VH K + +++G+ KV+++DE+ +LVLS
Sbjct: 397 VKSLRGFIPLSQ-GDVHFVKSLD--------NLVGTEFEAKVLEIDEKKNRLVLSRRAVL 447
Query: 371 --EKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLV 544
E++A ++ K +N+G+ + G V + YGAFV++ + GL+HIS++SW +
Sbjct: 448 EVERQAKLAEALKNINVGENYKGIVRKIMPYGAFVDIG------GIEGLLHISDISWQKI 501
Query: 545 QDVRDFLTKGE 577
+ V D L+ G+
Sbjct: 502 KKVEDVLSVGQ 512
Score = 55.1 bits (131), Expect = 4e-06
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 7/187 (3%)
Frame = +2
Query: 38 EFDTALLQRPSAPNSLDTLRQARRSSDWKA--ANAYKDS--GLIYNGRVEGINSGGLLLR 205
EF+ +L+ N L R+A + +A A A K+ G Y G V I G +
Sbjct: 424 EFEAKVLEIDEKKNRLVLSRRAVLEVERQAKLAEALKNINVGENYKGIVRKIMPYGAFVD 483
Query: 206 FYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK--- 376
+ G L +S + K ++++ +G + VK+ D ES KL LS K
Sbjct: 484 IGGIEGLLHISDIS-----WQKIKKVEDVLS--VGQEIEVKLQSFDAESNKLSLSLKALS 536
Query: 377 KASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVR 556
K+ W + +++GD+ G+V + YGAFV + + GL+HIS+++ V
Sbjct: 537 KSPWDVAEETLHVGDVINGKVVRLVAYGAFVAVN-----DDIQGLLHISQITKQRNAKVE 591
Query: 557 DFLTKGE 577
D+L +G+
Sbjct: 592 DYLNRGQ 598
[107][TOP]
>UniRef100_A4CSD5 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CSD5_SYNPV
Length = 368
Score = 70.5 bits (171), Expect = 9e-11
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 155 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 208
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
KP +E+ D L +K ++VDEE +LVLS ++A + + +G++ +G V
Sbjct: 209 --RKPKEELVADFL----PLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVRG 262
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 263 IKPYGAFIDIG------GVSGLLHISEISHEHIE 290
[108][TOP]
>UniRef100_A4RTM3 Plastid ribosomal protein S1, imported to chloroplast, small
ribosomal subunit n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RTM3_OSTLU
Length = 339
Score = 70.5 bits (171), Expect = 9e-11
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 1/181 (0%)
Frame = +2
Query: 38 EFDTALLQRPSAPNSLD-TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYS 214
++D ++Q + + ++R+ + W + G V +N GGLL+
Sbjct: 110 DYDFEIIQDDNGEGCMTLSVRRMELAKAWDRCREAQADDAALTGDVLSVNRGGLLVEVEK 169
Query: 215 LMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSK 394
L GF+P + +E +++G L K I+VDEE +LVLS + A+
Sbjct: 170 LRGFVPQSHIGVRTLNRE----------ELIGQQLPFKFIEVDEEKNRLVLSHRLATDMV 219
Query: 395 YSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKG 574
++ + +GD+ G V +V+ YGAFV++ +GL+HIS++S + + V + L+ G
Sbjct: 220 SAEGLEVGDVVEGMVQAVKPYGAFVDVG------GQSGLLHISQISHERIVAVENVLSPG 273
Query: 575 E 577
+
Sbjct: 274 D 274
[109][TOP]
>UniRef100_Q7U4S8 30S ribosomal protein S1, homolog A n=1 Tax=Synechococcus sp. WH
8102 RepID=Q7U4S8_SYNPX
Length = 367
Score = 70.1 bits (170), Expect = 1e-10
Identities = 43/136 (31%), Positives = 74/136 (54%)
Frame = +2
Query: 140 KDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSIL 319
K+ IY+ V N GG L+R L GF+P +S KP +E+ D L
Sbjct: 172 KEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST-------RKPKEELVADFL---- 219
Query: 320 SVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYH 499
+K ++VDEE +LVLS ++A + + +G++ +G V ++ YGAF+++
Sbjct: 220 PLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVRGIKPYGAFIDIG------G 273
Query: 500 LTGLIHISEVSWDLVQ 547
++GL+HISE+S + ++
Sbjct: 274 VSGLLHISEISHEHIE 289
[110][TOP]
>UniRef100_Q0QKF1 30S ribosomal protein S1 homolog B n=1 Tax=uncultured marine type-A
Synechococcus GOM 3O12 RepID=Q0QKF1_9SYNE
Length = 408
Score = 70.1 bits (170), Expect = 1e-10
Identities = 43/153 (28%), Positives = 77/153 (50%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W ++ G + V G N GG+ L GF+P QL + +E
Sbjct: 213 WDKVKEFEKEGKVVQVVVNGFNRGGVTCDLEGLRGFIPRSQLEDGENHQE---------- 262
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V I+V+ E+RKLVLS+K+A+ + + + +G + G V +V+ YG F++L
Sbjct: 263 -LVGKTLGVAFIEVNSETRKLVLSQKRAAVAARFQELEVGQLVEGVVAAVKPYGLFIDLG 321
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ +GE
Sbjct: 322 ------GISGLLHQSAITNGSLRSIREVFDQGE 348
[111][TOP]
>UniRef100_C4FZ56 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
49176 RepID=C4FZ56_ABIDE
Length = 305
Score = 70.1 bits (170), Expect = 1e-10
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 8/171 (4%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++++A W K+SG ++N ++ G + + F+P L+ +
Sbjct: 94 SIKRADNILAWDFLADAKESGQVFNVKITEAVKAGAVTYLKGIRAFIPASGLALEYV--- 150
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLS--------EKKASWSKYSKYVNLGDI 424
E +D +G +SV++I+VDE+ +KLVLS E K + K SK V +G +
Sbjct: 151 ------ENTEDFVGKHISVRIIEVDEDDKKLVLSAKSVLREEEAKKTEEKMSK-VAIGTV 203
Query: 425 FIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G+V +E+YGAFV R PDG L+GL+HIS++S ++ ++ +++ +
Sbjct: 204 VTGKVERLENYGAFV--RLPDG---LSGLVHISQMSERRIKHPKEVVSEND 249
[112][TOP]
>UniRef100_B6FJ02 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM
1787 RepID=B6FJ02_9CLOT
Length = 222
Score = 70.1 bits (170), Expect = 1e-10
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Frame = +2
Query: 110 SSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQE 289
++ W Y + G + +VEGI +GG + L GF+P +LS + E
Sbjct: 21 ANPWNRVTEYMEQGTVLPVKVEGIVNGGAIAMVEGLRGFIPASKLSLSYI---------E 71
Query: 290 IAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSK-------YVNLGDIFIGRVCSV 448
+D L + V+VIDVD+ + +LVLS ++ K K V +G + G V ++
Sbjct: 72 DLEDYLLKDIEVQVIDVDQANNRLVLSARELLKEKERKEKEKLLASVEVGSVLTGTVETL 131
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ YGAF+ L L+GL+H+S++ ++ D L GE
Sbjct: 132 QTYGAFIRLE-----NGLSGLVHVSQICEKRIKTPADVLKTGE 169
[113][TOP]
>UniRef100_B4VZV8 S1 RNA binding domain protein n=1 Tax=Microcoleus chthonoplastes
PCC 7420 RepID=B4VZV8_9CYAN
Length = 323
Score = 70.1 bits (170), Expect = 1e-10
Identities = 42/150 (28%), Positives = 75/150 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQTEDATVRSLVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
KP +D++G L +K ++VDE+ +LVLS ++A + + +G++ +G V +
Sbjct: 153 -RKP----KEDLVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVVGSVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEISHD 231
[114][TOP]
>UniRef100_A3YUT0 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 5701
RepID=A3YUT0_9SYNE
Length = 361
Score = 70.1 bits (170), Expect = 1e-10
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 149 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 202
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
KP +D++ L +K ++VDEE +LVLS ++A + + +G++ IG V
Sbjct: 203 --RKP----KEDLVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRG 256
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 257 IKPYGAFIDIG------GVSGLLHISEISHEHIE 284
[115][TOP]
>UniRef100_Q8DHB3 30S ribosomal protein S1 n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DHB3_THEEB
Length = 330
Score = 69.7 bits (169), Expect = 2e-10
Identities = 42/150 (28%), Positives = 76/150 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + +V N GG L+R L GF+P +S
Sbjct: 98 SIRRIEYMRAWERVRQLQAEDATVRSQVFATNRGGALVRIEGLRGFIPGSHIST-----R 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
NK ++++G L +K ++VDEE +LVLS ++A + + +G++ +G V +
Sbjct: 153 VNK------EELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNKLEVGEVVVGTVRGI 206
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 207 KPYGAFIDIG------GVSGLLHISEISHD 230
[116][TOP]
>UniRef100_Q46GP7 SSU ribosomal protein S1P n=1 Tax=Prochlorococcus marinus str.
NATL2A RepID=Q46GP7_PROMT
Length = 431
Score = 69.7 bits (169), Expect = 2e-10
Identities = 48/160 (30%), Positives = 81/160 (50%)
Frame = +2
Query: 98 QARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNK 277
+ R+S D K N K+ G + ++ G N GG+ F L GF+P QL
Sbjct: 221 ELRKSWD-KVQNLAKE-GKVIRVKINGFNRGGVTCDFEGLRGFIPRSQLED--------- 269
Query: 278 PIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDY 457
E + ++ +S ++V+ E RKLVLSEKKA+ + + +G + G + +++ Y
Sbjct: 270 --GENHQSLVSKTISTAFLEVNPERRKLVLSEKKAAIASRFSELEIGQLIEGEILTIKPY 327
Query: 458 GAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G FV+LR ++GL+H S V+ ++ +R+ GE
Sbjct: 328 GFFVDLR------GVSGLLHHSMVTNGSMRSLREVFQPGE 361
[117][TOP]
>UniRef100_Q2JJ89 Ribosomal protein S1 n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13)
RepID=Q2JJ89_SYNJB
Length = 322
Score = 69.7 bits (169), Expect = 2e-10
Identities = 42/152 (27%), Positives = 76/152 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + + N GG L+R L GF+P +S
Sbjct: 97 SIRRIEYMRAWERVRQLQKEDATVRSTIFATNRGGALVRIEGLRGFIPGSHIST------ 150
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
KP +E+ +G L +K ++VDE+ +LVLS ++A + + +G++ +G V +
Sbjct: 151 -RKPKEEL----VGEELPLKFLEVDEDRNRLVLSHRRALVERKMNKLEVGEVVVGTVRGI 205
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLV 544
+ YGAF+++ ++GL+HISE+S D V
Sbjct: 206 KPYGAFIDIG------GVSGLLHISEISHDHV 231
[118][TOP]
>UniRef100_Q111W5 SSU ribosomal protein S1P n=1 Tax=Trichodesmium erythraeum IMS101
RepID=Q111W5_TRIEI
Length = 304
Score = 69.7 bits (169), Expect = 2e-10
Identities = 42/162 (25%), Positives = 82/162 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
+++Q + W+ + G + RV G N GG+ + SL GF+P L
Sbjct: 103 SIKQLEINQIWERLAELEAGGQSFQVRVIGTNKGGVTVDIQSLRGFVPRSHLLA------ 156
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
++ + ++ +L+V +++D+E +K+V+S++ A+ S + +G + G+V V
Sbjct: 157 -----RDNLESLIDQVLTVNFLELDQEKKKIVMSQRLATQSAGFSKLAVGQLLEGKVVGV 211
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKG 574
+ +G FV+L LTGL+HI++VS V + ++G
Sbjct: 212 KPFGVFVDLE------GLTGLLHITQVSQKRVDSLSTIFSQG 247
[119][TOP]
>UniRef100_Q0I8M6 Ribosomal protein S1 n=1 Tax=Synechococcus sp. CC9311
RepID=Q0I8M6_SYNS3
Length = 401
Score = 69.7 bits (169), Expect = 2e-10
Identities = 42/153 (27%), Positives = 75/153 (49%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W + G + +V G N GG+ L GF+P QL E +
Sbjct: 206 WDKVKQLEKDGRVSQVKVTGFNRGGVTCDLEGLRGFIPRSQLQD-----------GENHE 254
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V ++V+ E+RKLVLSEK+A+ + + +G + G V +++ YG FV+L
Sbjct: 255 TLVGKTLGVAFLEVNSETRKLVLSEKRAATAARFSELEIGQLVEGHVAAIKPYGLFVDLG 314
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ +G+
Sbjct: 315 ------GISGLLHQSAITGGSMRSMREIFDQGD 341
[120][TOP]
>UniRef100_B1XJ16 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. PCC 7002
RepID=B1XJ16_SYNP2
Length = 326
Score = 69.7 bits (169), Expect = 2e-10
Identities = 40/150 (26%), Positives = 75/150 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQAEDATVRSLVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
++ +D++G L +K ++VDE+ +LVLS ++A + + +G++ +G V +
Sbjct: 153 -----RQAKEDLVGQELPLKFLEVDEDRNRLVLSHRRALVERKMNGLEVGEVVVGSVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEISHD 231
[121][TOP]
>UniRef100_A9BEF4 30S ribosomal protein S1-like protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9211
RepID=A9BEF4_PROM4
Length = 416
Score = 69.7 bits (169), Expect = 2e-10
Identities = 43/153 (28%), Positives = 75/153 (49%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W+ + G + G N GG+ L GF+P QL E +
Sbjct: 220 WETVMQLEKDGKTVEVTINGFNRGGVTCDLEGLRGFIPRSQLEQT-----------ENHE 268
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V I+V+ +SRKL+LSEKKA+ + + +G I G + +++ YG FV+L
Sbjct: 269 SLVGKKLCVAFIEVNPDSRKLILSEKKAATAARFAELEIGQIVAGEILAIKPYGFFVDLG 328
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ ++GE
Sbjct: 329 ------GVSGLLHQSMITNGSIRSLREVFSQGE 355
[122][TOP]
>UniRef100_A2C0Y8 30S ribosomal protein S1 protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. NATL1A
RepID=A2C0Y8_PROM1
Length = 465
Score = 69.7 bits (169), Expect = 2e-10
Identities = 48/160 (30%), Positives = 81/160 (50%)
Frame = +2
Query: 98 QARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNK 277
+ R+S D K N K+ G + ++ G N GG+ F L GF+P QL
Sbjct: 255 ELRKSWD-KVQNLAKE-GKVIRVKINGFNRGGVTCDFEGLRGFIPRSQLED--------- 303
Query: 278 PIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDY 457
E + ++ +S ++V+ E RKLVLSEKKA+ + + +G + G + +++ Y
Sbjct: 304 --GENHQSLVSKTISTAFLEVNPERRKLVLSEKKAAIASRFSELEIGQLIEGEILTIKPY 361
Query: 458 GAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G FV+LR ++GL+H S V+ ++ +R+ GE
Sbjct: 362 GFFVDLR------GVSGLLHHSMVTNGSMRSLREVFQPGE 395
[123][TOP]
>UniRef100_C1TMG3 SSU ribosomal protein S1P n=1 Tax=Dethiosulfovibrio peptidovorans
DSM 11002 RepID=C1TMG3_9BACT
Length = 512
Score = 69.7 bits (169), Expect = 2e-10
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 8/190 (4%)
Frame = +2
Query: 32 IDE-FDTALLQRPSAPNSLDTLRQARRSSDWKAA--NAYKD--SGLIYNGRVEGINSGGL 196
IDE FD LL++ L R+ + K N Y+D G + G V + S G+
Sbjct: 174 IDEVFDVKLLEKDRRKRRLVLSRRTILDEELKEQRENFYRDVTEGTVLEGTVSSLTSFGV 233
Query: 197 LLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK 376
+ + G + +LS + K ++IAK G + VKVI +D+E ++ LS K
Sbjct: 234 FVNLGPIDGLVHISELSWQRNAKP-----KDIAKK--GDTVKVKVIGIDQEHNRISLSVK 286
Query: 377 KAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
+ W ++ GD G V +V D+GAFVE+ + GLIHI ++SW ++
Sbjct: 287 QTQSDPWETITERWKDGDTATGTVTNVTDFGAFVEVE-----PGIEGLIHIGDLSWTRIK 341
Query: 548 DVRDFLTKGE 577
++ + KG+
Sbjct: 342 HPKEVIKKGQ 351
Score = 58.9 bits (141), Expect = 3e-07
Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Frame = +2
Query: 188 GGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVL 367
GGL++ SL GF+P L+ P K I E+ VK+++ D R+LVL
Sbjct: 143 GGLMVDCCSLEGFIPISHLAEEGRGVNPGKFIDEV--------FDVKLLEKDRRKRRLVL 194
Query: 368 S-------EKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISE 526
S E K + + V G + G V S+ +G FV L + GL+HISE
Sbjct: 195 SRRTILDEELKEQRENFYRDVTEGTVLEGTVSSLTSFGVFVNLG------PIDGLVHISE 248
Query: 527 VSWDLVQDVRDFLTKGE 577
+SW +D KG+
Sbjct: 249 LSWQRNAKPKDIAKKGD 265
[124][TOP]
>UniRef100_P73530 30S ribosomal protein S1 homolog A n=1 Tax=Synechocystis sp. PCC
6803 RepID=RS1A_SYNY3
Length = 328
Score = 69.7 bits (169), Expect = 2e-10
Identities = 41/150 (27%), Positives = 73/150 (48%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 98 SIRRIEYMRAWERVRQLQAEDATVRSNVFATNRGGALVRIEGLRGFIPGSHISA------ 151
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
+E +D++G L +K ++VDEE +LVLS ++A + + + + +G V +
Sbjct: 152 -----REAKEDLVGEDLPLKFLEVDEERNRLVLSHRRALVERKMNGLEVAQVVVGSVRGI 206
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 207 KPYGAFIDIG------GVSGLLHISEISHD 230
[125][TOP]
>UniRef100_Q0QM09 30S ribosomal protein S1-like protein B n=1 Tax=uncultured marine
type-A Synechococcus 5B2 RepID=Q0QM09_9SYNE
Length = 411
Score = 69.3 bits (168), Expect = 2e-10
Identities = 43/153 (28%), Positives = 76/153 (49%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W + G + V G N GG+ L GF+P QL + +E
Sbjct: 216 WDKVKELEKQGKVVQVIVNGFNRGGVTCDLEGLRGFIPRSQLQDGENHQE---------- 265
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V I+V+ E+RKLVLSEK+A+ + + + +G + G V +V+ YG F++L
Sbjct: 266 -LVGKTLGVAFIEVNSETRKLVLSEKRAAIAARFQELEIGQLVEGLVAAVKPYGLFIDLG 324
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ +G+
Sbjct: 325 ------GISGLLHQSAITNGSLRSIREVFDQGD 351
[126][TOP]
>UniRef100_Q0QKQ2 30S ribosomal protein S1 homolog B n=1 Tax=uncultured marine type-A
Synechococcus GOM 3M9 RepID=Q0QKQ2_9SYNE
Length = 423
Score = 69.3 bits (168), Expect = 2e-10
Identities = 42/153 (27%), Positives = 77/153 (50%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W+ + G + V G N GG+ L GF+P QL + +E
Sbjct: 228 WERVKEMEKQGKVVQVIVNGFNRGGVTCDLEGLRGFIPRSQLQDGENHQE---------- 277
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V ++V+ E+RKLVLSEK+A+ + + +G + G+V +V+ YG F++L
Sbjct: 278 -LVGKTLGVAFLEVNSETRKLVLSEKRAAVAARFSELEVGQLVEGQVAAVKPYGLFIDLG 336
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ +G+
Sbjct: 337 ------GISGLLHQSMITNGSLRSIREVFDQGD 363
[127][TOP]
>UniRef100_C2HGK6 Possible 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Finegoldia magna ATCC 53516 RepID=C2HGK6_PEPMA
Length = 675
Score = 69.3 bits (168), Expect = 2e-10
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Frame = +2
Query: 116 DWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIA 295
+WK + D+ +V + GGL+ ++ F+P Q++ H K+ +K +
Sbjct: 369 NWKNLVSSFDNDSTVEAKVTQVVKGGLIATIDNVRAFIPGSQVT-THFVKDLSKYV---- 423
Query: 296 KDMLGSILSVKVIDVDEESRKLVLS-------EKKASWSKYSKYVNLGDIFIGRVCSVED 454
G L KV+++DE+ R+LVLS E+K K + + +G+ G+V + D
Sbjct: 424 ----GETLVCKVLNIDEKKRRLVLSHRAVVEAEQKEIEDKAWENITVGETITGKVQRLTD 479
Query: 455 YGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+GAF++L D GL+HIS++SW+ ++ D L G+
Sbjct: 480 FGAFIDLGGVD------GLLHISDISWNRIESPEDVLKVGD 514
[128][TOP]
>UniRef100_Q8Z0G0 30S ribosomal protein S1 n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8Z0G0_ANASP
Length = 343
Score = 68.9 bits (167), Expect = 3e-10
Identities = 43/148 (29%), Positives = 74/148 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQAEDATVRSGVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
KP +E+ +G L +K ++VDEE +LVLS ++A + + +G++ IG V +
Sbjct: 153 -RKPKEEL----VGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVS 532
+ YGAF+++ ++GL+HISE+S
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEIS 229
[129][TOP]
>UniRef100_Q3MD08 SSU ribosomal protein S1P n=1 Tax=Anabaena variabilis ATCC 29413
RepID=Q3MD08_ANAVT
Length = 343
Score = 68.9 bits (167), Expect = 3e-10
Identities = 43/148 (29%), Positives = 74/148 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQAEDATVRSGVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
KP +E+ +G L +K ++VDEE +LVLS ++A + + +G++ IG V +
Sbjct: 153 -RKPKEEL----VGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVS 532
+ YGAF+++ ++GL+HISE+S
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEIS 229
[130][TOP]
>UniRef100_B2J9K3 RNA binding S1 domain protein n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2J9K3_NOSP7
Length = 375
Score = 68.9 bits (167), Expect = 3e-10
Identities = 43/148 (29%), Positives = 74/148 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQAEDATVRSGVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
KP +E+ +G L +K ++VDEE +LVLS ++A + + +G++ IG V +
Sbjct: 153 -RKPKEEL----VGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVS 532
+ YGAF+++ ++GL+HISE+S
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEIS 229
[131][TOP]
>UniRef100_A5GUD2 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. RCC307
RepID=A5GUD2_SYNR3
Length = 397
Score = 68.9 bits (167), Expect = 3e-10
Identities = 46/162 (28%), Positives = 80/162 (49%)
Frame = +2
Query: 92 LRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEP 271
LRQA W + G + ++ G N GG L GF+P QL+
Sbjct: 198 LRQA-----WDKVRQLEKEGKVVQVKITGFNRGGCTCDLEGLRGFIPRSQLNE------- 245
Query: 272 NKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVE 451
E + ++G + V ++V+ ++RKLVLSEKKA+ + + + +G + G V SV+
Sbjct: 246 ----GENHEALVGKTVGVAFLEVNPDTRKLVLSEKKAAMAAFFADLEVGQLVSGLVTSVK 301
Query: 452 DYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
YG FV+L ++GL+H S ++ ++++R+ G+
Sbjct: 302 PYGFFVDLG------GVSGLLHHSCITGGTMRELREIFDSGD 337
[132][TOP]
>UniRef100_A5GJG3 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJG3_SYNPW
Length = 403
Score = 68.9 bits (167), Expect = 3e-10
Identities = 43/153 (28%), Positives = 75/153 (49%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W + G + +V G N GG+ L GF+P QL E +
Sbjct: 208 WDKVKQLEKEGKVAQVKVSGFNRGGVTCDLEGLRGFIPRSQLQE-----------GENHE 256
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V ++V+ E+RKLVLSEKKA+ + + +G + G V +V+ YG F++L
Sbjct: 257 ALVGKTLGVAFLEVNPETRKLVLSEKKAATAARFAELEVGQLVEGHVAAVKPYGLFIDLG 316
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ +G+
Sbjct: 317 ------GISGLLHQSMITGGSLRSLREVFDQGD 343
[133][TOP]
>UniRef100_Q05RJ7 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
RepID=Q05RJ7_9SYNE
Length = 439
Score = 68.9 bits (167), Expect = 3e-10
Identities = 43/153 (28%), Positives = 74/153 (48%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W + G + +V G N GG+ L GF+P QL E +
Sbjct: 244 WDKVKVLEKEGKVVQVKVSGFNRGGVTCDLEGLRGFIPRSQLQD-----------GENHE 292
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V ++V+ E+RKLVLSEK+A+ + + +G + G V +V+ YG FV+L
Sbjct: 293 SLVGKTLGVAFLEVNSETRKLVLSEKRAATAARFSELEVGQLVEGHVVAVKPYGFFVDLG 352
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ G+
Sbjct: 353 ------GISGLLHQSVITGGSLRSLREVFDHGD 379
[134][TOP]
>UniRef100_B9YLF3 RNA binding S1 domain protein n=1 Tax='Nostoc azollae' 0708
RepID=B9YLF3_ANAAZ
Length = 341
Score = 68.9 bits (167), Expect = 3e-10
Identities = 43/148 (29%), Positives = 74/148 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQAEDATVRSGVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
KP +E+ +G L +K ++VDEE +LVLS ++A + + +G++ IG V +
Sbjct: 153 -RKPKEEL----VGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVS 532
+ YGAF+++ ++GL+HISE+S
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEIS 229
[135][TOP]
>UniRef100_A0ZA65 30S ribosomal protein S1 n=1 Tax=Nodularia spumigena CCY9414
RepID=A0ZA65_NODSP
Length = 383
Score = 68.9 bits (167), Expect = 3e-10
Identities = 43/148 (29%), Positives = 74/148 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQAEDATVRSGVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
KP +E+ +G L +K ++VDEE +LVLS ++A + + +G++ IG V +
Sbjct: 153 -RKPKEEL----VGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVS 532
+ YGAF+++ ++GL+HISE+S
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEIS 229
[136][TOP]
>UniRef100_A0YXU1 30S ribosomal protein S1 n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YXU1_9CYAN
Length = 414
Score = 68.9 bits (167), Expect = 3e-10
Identities = 42/150 (28%), Positives = 75/150 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + +V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQAEDATVRSQVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
KP +E+ + L +K ++VDE+ +LVLS ++A + + +G++ IG V +
Sbjct: 153 -RKPKEELVSEEL----PLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEISHD 231
[137][TOP]
>UniRef100_B0S1K4 Fusion penicillin tolerance LytB domain and 30S ribosomal protein
S1 n=1 Tax=Finegoldia magna ATCC 29328
RepID=B0S1K4_FINM2
Length = 675
Score = 68.6 bits (166), Expect = 3e-10
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Frame = +2
Query: 116 DWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIA 295
+WK + D+ +V + GGL+ ++ F+P Q++ H K+ +K +
Sbjct: 369 NWKNLVSSFDNDSTVEAKVTQVVKGGLIATIDNVRAFIPGSQVT-THFVKDLSKYV---- 423
Query: 296 KDMLGSILSVKVIDVDEESRKLVLS-------EKKASWSKYSKYVNLGDIFIGRVCSVED 454
G L KV+++DE+ R+LVLS E+K K + + +G+ G+V + D
Sbjct: 424 ----GETLVCKVLNIDEKKRRLVLSHRAVVEAEQKEIEDKAWENITVGEKITGKVQRLTD 479
Query: 455 YGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+GAF++L D GL+HIS++SW+ ++ D L G+
Sbjct: 480 FGAFIDLGGVD------GLLHISDISWNRIESPEDVLKVGD 514
[138][TOP]
>UniRef100_A5GR09 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. RCC307
RepID=A5GR09_SYNR3
Length = 367
Score = 68.6 bits (166), Expect = 3e-10
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 156 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 209
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
KP +E+ + L +K ++VDEE +LVLS ++A + + +G++ +G V
Sbjct: 210 --RKPKEELVAEFL----PLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVLGTVRG 263
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 264 IKPYGAFIDIG------GVSGLLHISEISHEHIE 291
[139][TOP]
>UniRef100_Q0QKJ9 30S ribosomal protein S1 homolog B n=1 Tax=uncultured marine type-A
Synechococcus GOM 3O6 RepID=Q0QKJ9_9SYNE
Length = 408
Score = 68.6 bits (166), Expect = 3e-10
Identities = 43/153 (28%), Positives = 76/153 (49%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W + G + V G N GG+ L GF+P QL + +E
Sbjct: 213 WDKVKELEKQGKVVQVIVNGFNRGGVTCDLEGLRGFIPRSQLQEGDNHQE---------- 262
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V I+V+ E+RKLVLS+K+A+ + + + +G + G V +V+ YG F++L
Sbjct: 263 -LVGKTLGVAFIEVNSETRKLVLSQKRAAVAARFQELEVGQLVEGVVAAVKPYGLFIDLG 321
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ +GE
Sbjct: 322 ------GISGLLHQSSITNGSLRSIREVFDQGE 348
[140][TOP]
>UniRef100_D0CHB9 SSU ribosomal protein S1P n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CHB9_9SYNE
Length = 390
Score = 68.6 bits (166), Expect = 3e-10
Identities = 43/153 (28%), Positives = 76/153 (49%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W G + V G N GG+ L GF+P QL + +E
Sbjct: 195 WDRVKELDKQGKVVQVIVNGFNRGGVTCDLEGLRGFIPRSQLQNGENHQE---------- 244
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
+G L V I+V+ E+RKLVLSEK+A+ ++ + + +G + G+V +V+ YG F++L
Sbjct: 245 -FVGKTLGVAFIEVNSETRKLVLSEKRAAVAERFQDLEVGQLVEGQVAAVKPYGLFIDLG 303
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ +G+
Sbjct: 304 ------GISGLLHQSAITNGSLRSIREVFDQGD 330
[141][TOP]
>UniRef100_B5VXQ7 RNA binding S1 domain protein n=1 Tax=Arthrospira maxima CS-328
RepID=B5VXQ7_SPIMA
Length = 375
Score = 68.6 bits (166), Expect = 3e-10
Identities = 42/150 (28%), Positives = 75/150 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + +V N GG L+R L GF+P +S
Sbjct: 99 SIRRIEYMRAWERVRQLQAEDATVRSQVFATNRGGALVRIEGLRGFIPGSHIST------ 152
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
KP +E+ + L +K ++VDE+ +LVLS ++A + + +G++ IG V +
Sbjct: 153 -RKPKEELVAEEL----PLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVIGTVRGI 207
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWD 538
+ YGAF+++ ++GL+HISE+S D
Sbjct: 208 KPYGAFIDIG------GVSGLLHISEISHD 231
[142][TOP]
>UniRef100_C1MJR8 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MJR8_9CHLO
Length = 475
Score = 68.6 bits (166), Expect = 3e-10
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 47/217 (21%)
Frame = +2
Query: 68 SAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYS--LMGFLPYPQ 241
SA +S + ++ +A A SG GRVE N GGL+LR ++ FLP Q
Sbjct: 95 SAGSSSSSSSPSKNEKAKEALAAALRSGDAVVGRVEVANRGGLILRIFNGRYRAFLPLSQ 154
Query: 242 LS-----------------------PVHSCKE------------PNKPIQEIAKD----- 301
++ P+ S + P P + AKD
Sbjct: 155 MASSRTAAIKGGKSKAAAQLKRVTAPLASFDDDDDGGDFAPPTPPPSPPKPSAKDATVAA 214
Query: 302 ---MLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVE 472
++G+ +SV+V DV++ +K+V+SE+ +K + GD+ G V S+ D+GAFVE
Sbjct: 215 LEQLVGTNISVRVTDVND--KKIVVSERALVQDVGAKALKPGDVARGAVMSMSDFGAFVE 272
Query: 473 LRFPDGLY--HLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ PD GLIHISE+SW+ V RD + G+
Sbjct: 273 I-LPDDARAPRCEGLIHISELSWNRVSHPRDVVKVGD 308
[143][TOP]
>UniRef100_A4RTR2 Putative mitochondrial ribosomal protein S1 n=1 Tax=Ostreococcus
lucimarinus CCE9901 RepID=A4RTR2_OSTLU
Length = 352
Score = 68.6 bits (166), Expect = 3e-10
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 8/169 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYS--LMGFLPYPQLSPVHSCKE 268
+ AR A A + G G+VE +N GG++LR FLP Q+ +
Sbjct: 45 KNAREQDVRAAIEAIERDGGRLTGKVEVVNRGGVVLRVTKGRFRAFLPKSQMRSSRLRGD 104
Query: 269 PNKPIQE-----IAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIG 433
+E + + +G ++ VK+ VD S+++V+SE+ + S+ + +GD+
Sbjct: 105 FRGGAEEADETKMLEAQIGKLIDVKL--VDHSSKRIVVSERALLQERASEKLPVGDVKEV 162
Query: 434 RVCSVEDYGAFVELRFPDG-LYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
V S+ D+GAFVE+ G L GL+HISE+SW+ + RD + G+
Sbjct: 163 VVTSLSDFGAFVEVCDGQGEASGLEGLVHISEISWNRISHPRDAVKVGQ 211
[144][TOP]
>UniRef100_B1X539 30S ribosomal protein S1 n=1 Tax=Paulinella chromatophora
RepID=B1X539_PAUCH
Length = 330
Score = 68.6 bits (166), Expect = 3e-10
Identities = 42/154 (27%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 116 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 169
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
++ ++++ L +K ++VDEE +LVLS ++A + + +G++ IG V
Sbjct: 170 ------RKAKEELVSDFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRG 223
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 224 IKPYGAFIDIG------GVSGLLHISEISHEHIE 251
[145][TOP]
>UniRef100_Q7V6D2 30S ribosomal protein S1 homolog B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9313
RepID=Q7V6D2_PROMM
Length = 421
Score = 68.2 bits (165), Expect = 4e-10
Identities = 42/153 (27%), Positives = 76/153 (49%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W + G + +V G N GG+ L GF+P QL E +
Sbjct: 226 WSKVQQMEKEGKVAQVKVNGFNRGGVTCDLEGLRGFIPRSQLQN-----------GENHE 274
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V ++V+ E+RKLVLSEK+A+ + + +G + G+V +V+ YG F++L
Sbjct: 275 ALIGKTLGVAFLEVNPETRKLVLSEKRAATAARFSELEVGQLVEGQVVAVKPYGFFIDLG 334
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ +G+
Sbjct: 335 ------GVSGLLHQSMITGGSLRSLREVFNQGD 361
[146][TOP]
>UniRef100_Q46H55 SSU ribosomal protein S1P n=1 Tax=Prochlorococcus marinus str.
NATL2A RepID=Q46H55_PROMT
Length = 369
Score = 68.2 bits (165), Expect = 4e-10
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 156 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 209
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
++ ++++ L +K ++VDEE +LVLS ++A + + +G++ +G V
Sbjct: 210 ------RKAKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGAVRG 263
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 264 IKPYGAFIDIG------GVSGLLHISEISHEHIE 291
[147][TOP]
>UniRef100_Q3ALN4 RNA binding S1 n=1 Tax=Synechococcus sp. CC9605 RepID=Q3ALN4_SYNSC
Length = 424
Score = 68.2 bits (165), Expect = 4e-10
Identities = 42/153 (27%), Positives = 77/153 (50%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W + G + V N GG+ L GF+P QL + +E
Sbjct: 229 WDRVKELEKQGKVVQVIVNNFNRGGVTCDLQGLRGFIPRSQLQNGENHQE---------- 278
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V I+V+ E+RKLVLSEK+A+ ++ + + +G + G+V +V+ YG F++L
Sbjct: 279 -LVGKTLGVAFIEVNSETRKLVLSEKRAAVAERFQDLEVGQLVEGQVAAVKPYGLFIDLG 337
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ +G+
Sbjct: 338 ------GISGLLHQSAITNGRLRSIREVFDQGD 364
[148][TOP]
>UniRef100_Q2JS77 Ribosomal protein S1 n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JS77_SYNJA
Length = 323
Score = 68.2 bits (165), Expect = 4e-10
Identities = 41/152 (26%), Positives = 76/152 (50%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ W+ + + N GG L+R L GF+P +S
Sbjct: 98 SIRRIEYMRAWERVRQLQKEDATVRATIFATNRGGALVRIEGLRGFIPGSHISS------ 151
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
KP +E+ +G L +K ++VDE+ +LVLS ++A + + +G++ +G V +
Sbjct: 152 -RKPKEEL----VGEELPLKFLEVDEDRNRLVLSHRRALVERKMNKLEVGEVVVGTVRGI 206
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLV 544
+ YGAF+++ ++GL+HISE+S + V
Sbjct: 207 KPYGAFIDIG------GVSGLLHISEISHEHV 232
[149][TOP]
>UniRef100_B2TIA5 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Clostridium botulinum B str. Eklund 17B
RepID=B2TIA5_CLOBB
Length = 635
Score = 68.2 bits (165), Expect = 4e-10
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 3/168 (1%)
Frame = +2
Query: 83 LDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSC 262
L+ L++ W++ N G + V+ + G L + G L Q+S H
Sbjct: 461 LEVLKETEEEKIWESLNV----GDVLEAEVKRFTNFGAFLDVNGIDGLLHLSQISWNHV- 515
Query: 263 KEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKA---SWSKYSKYVNLGDIFIG 433
K I++I K G ++ VK+I +D+E++KL LS K+ W + G I +G
Sbjct: 516 ----KNIEDILKK--GEMIEVKIIALDKENKKLSLSRKELLPKPWENVKEKYPEGSIVLG 569
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+V + D+GAF+EL + GL+HIS++S++ + + L+ GE
Sbjct: 570 KVVRINDFGAFIELE-----PGVDGLVHISKISFNRISHPSEVLSVGE 612
Score = 60.1 bits (144), Expect = 1e-07
Identities = 42/168 (25%), Positives = 83/168 (49%), Gaps = 14/168 (8%)
Frame = +2
Query: 116 DWKAANAYKDSGLIYNG------RVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNK 277
+++ AYK+ ++N +++ + GL+ + + F+P Q+ + K+ +K
Sbjct: 374 EYEKEEAYKELDTLFNEGKTFEVKIKEASENGLVAYYKGIRIFIPASQID-IKFTKDKSK 432
Query: 278 PIQEIAKDMLGSILSVKVIDVDEESRKLVLSE--------KKASWSKYSKYVNLGDIFIG 433
I +I L VK+I+ E K V++ K+ K + +N+GD+
Sbjct: 433 YINQI--------LEVKLINYSAEEHKKVIASRRVLLEVLKETEEEKIWESLNVGDVLEA 484
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
V ++GAF+++ DGL +H+S++SW+ V+++ D L KGE
Sbjct: 485 EVKRFTNFGAFLDVNGIDGL------LHLSQISWNHVKNIEDILKKGE 526
[150][TOP]
>UniRef100_A9BDW8 30S ribosomal protein S1-like protein A n=1 Tax=Prochlorococcus
marinus str. MIT 9211 RepID=A9BDW8_PROM4
Length = 371
Score = 68.2 bits (165), Expect = 4e-10
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 158 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 211
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
++ ++++ L +K ++VDEE +LVLS ++A + + +G++ +G V
Sbjct: 212 ------RKAKEELVAEFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGAVRG 265
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 266 IKPYGAFIDIG------GVSGLLHISEISHEHIE 293
[151][TOP]
>UniRef100_A5GJ26 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJ26_SYNPW
Length = 367
Score = 68.2 bits (165), Expect = 4e-10
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 154 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 207
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
++ ++++ L +K ++VDEE +LVLS ++A + + +G++ +G V
Sbjct: 208 ------RKAKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGTVRG 261
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 262 IKPYGAFIDIG------GVSGLLHISEISHEHIE 289
[152][TOP]
>UniRef100_A2C0F6 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. NATL1A RepID=A2C0F6_PROM1
Length = 369
Score = 68.2 bits (165), Expect = 4e-10
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 156 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 209
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
++ ++++ L +K ++VDEE +LVLS ++A + + +G++ +G V
Sbjct: 210 ------RKAKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGAVRG 263
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 264 IKPYGAFIDIG------GVSGLLHISEISHEHIE 291
[153][TOP]
>UniRef100_Q060S3 RNA binding S1 n=1 Tax=Synechococcus sp. BL107 RepID=Q060S3_9SYNE
Length = 412
Score = 68.2 bits (165), Expect = 4e-10
Identities = 43/153 (28%), Positives = 75/153 (49%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W + G + V G N GG+ L GF+P QL + +E
Sbjct: 217 WDKVKVLEKEGKVVQVIVSGFNRGGVTCDLEGLRGFIPRSQLQDGENHQE---------- 266
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V ++V+ +RKLVLSEK+AS + + + +G + G V SV+ YG F++L
Sbjct: 267 -LVGKTLGVAFLEVNSGTRKLVLSEKRASVAARFQELEVGQLVDGLVASVKPYGLFIDLG 325
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ +G+
Sbjct: 326 ------GISGLLHQSAITNGSLRSIREVFDEGD 352
[154][TOP]
>UniRef100_Q7VDM5 Ribosomal protein S1 n=1 Tax=Prochlorococcus marinus
RepID=Q7VDM5_PROMA
Length = 367
Score = 67.8 bits (164), Expect = 6e-10
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 154 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 207
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
++ ++++ L +K ++VDEE +LVLS ++A + + +G++ +G V
Sbjct: 208 ------RKAKEELVAEYLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVVGAVRG 261
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 262 IKPYGAFIDIG------GVSGLLHISEISHEHIE 289
[155][TOP]
>UniRef100_Q3AV59 SSU ribosomal protein S1P n=1 Tax=Synechococcus sp. CC9902
RepID=Q3AV59_SYNS9
Length = 412
Score = 67.8 bits (164), Expect = 6e-10
Identities = 42/153 (27%), Positives = 75/153 (49%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W + G + V G N GG+ L GF+P QL + +E
Sbjct: 217 WDKVKVLEKEGKVVQVIVSGFNRGGVTCDLEGLRGFIPRSQLQDGENHQE---------- 266
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V ++V+ +RKLVLSEK+A+ + + + +G + G V SV+ YG F++L
Sbjct: 267 -LVGKTLGVAFLEVNSGTRKLVLSEKRAATAARFQELEVGQLVEGLVASVKPYGLFIDLG 325
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ +G+
Sbjct: 326 ------GISGLLHQSSITNGSLRSIREVFDQGD 352
[156][TOP]
>UniRef100_A5N6D1 30S ribosomal protein S1 n=2 Tax=Clostridium kluyveri
RepID=A5N6D1_CLOK5
Length = 314
Score = 67.8 bits (164), Expect = 6e-10
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 13/180 (7%)
Frame = +2
Query: 77 NSLD-TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSP 250
NS+D + + S W K N +K+ I+ ++ + GGL+ + L F+P +S
Sbjct: 8 NSVDGIINETDMESVWSKLENEFKNED-IFEVVIKELVKGGLIADLHGLRAFIPASHISV 66
Query: 251 VHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK-----------KASWSKY 397
++ + K+ +G L VK+I +D+ K+VLS K K WS
Sbjct: 67 KYT---------DDLKEFIGKTLKVKLIQLDKSKNKIVLSGKEVEKLELEEMSKKLWSTI 117
Query: 398 SKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
SK GD GRV + ++G FV+L + GL+HISE+SW ++D + ++ G+
Sbjct: 118 SK----GDKIEGRVSRITNFGVFVDLG------GVEGLVHISELSWKKIKDPSEVVSVGD 167
[157][TOP]
>UniRef100_A2C7R6 30S ribosomal protein S1 protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9303
RepID=A2C7R6_PROM3
Length = 481
Score = 67.8 bits (164), Expect = 6e-10
Identities = 42/153 (27%), Positives = 76/153 (49%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W + G + +V G N GG+ L GF+P QL E +
Sbjct: 286 WSKVQQMEKEGKVAQVKVNGFNRGGVTCDLEGLRGFIPRSQLQN-----------GENHE 334
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V ++V+ E+RKLVLSEK+A+ + + +G + G+V +V+ YG F++L
Sbjct: 335 ALVGKTLGVAFLEVNPETRKLVLSEKRAATAARFSELEVGQLVEGQVVAVKPYGFFIDLG 394
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ +G+
Sbjct: 395 ------GVSGLLHQSMITGGSLRSLREVFNQGD 421
[158][TOP]
>UniRef100_B5IPJ0 Ribosomal protein S1 n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IPJ0_9CHRO
Length = 351
Score = 67.8 bits (164), Expect = 6e-10
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +2
Query: 89 TLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCK 265
++R+ W + K+ IY+ V N GG L+R L GF+P +S
Sbjct: 139 SIRRIEYQRAWERVRQLQKEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHIST----- 192
Query: 266 EPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCS 445
++ ++++ L +K ++VDEE +LVLS ++A + + +G++ +G V
Sbjct: 193 ------RKAKEELVADFLPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVLGTVRG 246
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
++ YGAF+++ ++GL+HISE+S + ++
Sbjct: 247 IKPYGAFIDIG------GVSGLLHISEISHEHIE 274
[159][TOP]
>UniRef100_A4CS32 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CS32_SYNPV
Length = 430
Score = 67.8 bits (164), Expect = 6e-10
Identities = 42/153 (27%), Positives = 74/153 (48%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W + G + +V G N GG+ L GF+P QL E +
Sbjct: 235 WDKVKQLEKEGKVAQVKVSGFNRGGVTCDLEGLRGFIPRSQLQD-----------GENHE 283
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V ++V+ ++RKLVLSEKKA+ + + +G + G V +V+ YG F++L
Sbjct: 284 ALVGKTLGVAFLEVNPDTRKLVLSEKKAATAARFAELEVGQLVEGHVAAVKPYGLFIDLG 343
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ G+
Sbjct: 344 ------GISGLLHQSMITGGSLRSIREVFDHGD 370
[160][TOP]
>UniRef100_B3DUV3 Ribosomal protein S1 n=1 Tax=Methylacidiphilum infernorum V4
RepID=B3DUV3_METI4
Length = 449
Score = 67.4 bits (163), Expect = 8e-10
Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 8/169 (4%)
Frame = +2
Query: 95 RQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEP 271
++A + +W K +++ G I G+V+ + GGL+L + FLP Q+ V P
Sbjct: 78 QKAAQKQNWDKILKTFEEGGTI-TGKVKQVVKGGLMLNI-GVEAFLPASQIDIV-----P 130
Query: 272 NKPIQEIAKDMLGSILSVKVIDVDEESRKLVLS-------EKKASWSKYSKYVNLGDIFI 430
K ++E G+ L+ K++ + EE + +VLS E+ ++ + V++GD+
Sbjct: 131 PKNLKEYE----GATLTCKIVKISEERKNVVLSRREIVEAERNQKRLQFLEKVHVGDLVK 186
Query: 431 GRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G V +V D+GAF++L DG + GLIHI+++SW + + L G+
Sbjct: 187 GVVKNVTDFGAFIDL---DG---IDGLIHITDMSWGRINHPSEILKVGQ 229
[161][TOP]
>UniRef100_A6LWH1 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Clostridium
beijerinckii NCIMB 8052 RepID=A6LWH1_CLOB8
Length = 635
Score = 67.4 bits (163), Expect = 8e-10
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Frame = +2
Query: 92 LRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEP 271
L +++ S D KA ++ + G + G V+ G + + G L Q+S H
Sbjct: 461 LEESKNSEDAKAWESF-NLGDVIKGEVKRFTDFGAFVEVNGIDGLLHLSQISWNHI---- 515
Query: 272 NKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKA---SWSKYSKYVNLGDIFIGRVC 442
K + ++ K+ G I+ VK+I +D+E++KL LS K+ W + G I +G+V
Sbjct: 516 -KKVSDVLKE--GQIIDVKIIGLDKEAKKLSLSIKELVAKPWDNAKEKYPEGSIVLGKVV 572
Query: 443 SVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ D+GAFVEL + GL+HIS++S + ++ + L GE
Sbjct: 573 RLNDFGAFVELE-----PGVDGLVHISKISHNRIEHPSEVLKIGE 612
Score = 56.2 bits (134), Expect = 2e-06
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Frame = +2
Query: 107 RSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQ 286
R +K G + V+ G++ + F+P Q+ + K+ +
Sbjct: 377 REEAFKELEKIYSEGTTFEVNVKEAREKGIVADYKGARIFIPASQID-IKFTKDKS---- 431
Query: 287 EIAKDMLGSILSVKVIDVDEE-------SRKLVLSEKKASW-SKYSKYVNLGDIFIGRVC 442
+ +G L VK+ID + SR+++L E K S +K + NLGD+ G V
Sbjct: 432 ----EYVGKKLEVKLIDFSLKNPVKLVASRRVLLEESKNSEDAKAWESFNLGDVIKGEVK 487
Query: 443 SVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
D+GAFVE+ D GL+H+S++SW+ ++ V D L +G+
Sbjct: 488 RFTDFGAFVEVNGID------GLLHLSQISWNHIKKVSDVLKEGQ 526
[162][TOP]
>UniRef100_C2BDN4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Anaerococcus lactolyticus ATCC 51172
RepID=C2BDN4_9FIRM
Length = 692
Score = 67.4 bits (163), Expect = 8e-10
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
Frame = +2
Query: 80 SLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHS 259
SL T R+ WK + ++ + +G+V N GGL + + GF+P Q++
Sbjct: 364 SLST-RRVEGMKAWKELSDKFENEELVHGKVISFNKGGLTVEVNGVNGFVPASQIATY-- 420
Query: 260 CKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYVNLGDIFI 430
+ K +G +K+I +DE +LVLS K +A + G +
Sbjct: 421 -------FVKNLKKFVGEEWDLKIISIDERKNRLVLSRKDVLEAELDDLWDELEEGQVVK 473
Query: 431 GRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G+V + D+GAFVE+ L GL+H+S+++W V+ D L G+
Sbjct: 474 GKVARLTDFGAFVEVN------GLDGLLHVSDIAWTRVEHPSDVLNVGD 516
Score = 63.2 bits (152), Expect = 1e-08
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G+V + G + L G L ++ + P+ + +G +
Sbjct: 467 EEGQVVKGKVARLTDFGAFVEVNGLDGLLHVSDIAWTR-VEHPSDVLN------VGDEIE 519
Query: 323 VKVIDVDEESRKLVLSEKKASWSKYSKYVN---LGDIFIGRVCSVEDYGAFVELRFPDGL 493
VK++ +++E ++ L K+ + K+VN +GD+ G+V ++ D+GAFVE+ DG+
Sbjct: 520 VKILKLNKEKNRISLGRKQLIEKPFEKFVNEHQVGDVVEGKVVNLLDFGAFVEVA--DGV 577
Query: 494 YHLTGLIHISEVSWDLVQDVRDFLTKGE 577
GL+H+SE+SWD V+ D L G+
Sbjct: 578 ---EGLVHVSEISWDHVEKPSDELNVGD 602
[163][TOP]
>UniRef100_C0B945 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
27758 RepID=C0B945_9FIRM
Length = 253
Score = 67.4 bits (163), Expect = 8e-10
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
Frame = +2
Query: 110 SSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQE 289
++ W Y++ G + +VEGI +GG++ L GF+P +LS + I++
Sbjct: 23 ANPWNVVARYQEEGTNLHVKVEGIVNGGVIAMVEGLRGFIPASRLSLSY--------IED 74
Query: 290 IAKDMLGSILSVKVIDVDEESRKLVLS-------EKKASWSKYSKYVNLGDIFIGRVCSV 448
+ +L I V+VI+ ++ +L+LS +KKA +K V +G + G V S+
Sbjct: 75 LETYLLKEI-DVRVIEANQAEGRLILSAREILREQKKAEDAKKLASVQVGSVVKGTVESL 133
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ YGAFV L L+GL+HIS++S ++ L G+
Sbjct: 134 QSYGAFVRLE-----NGLSGLVHISQISTQRIKSADQVLHVGD 171
[164][TOP]
>UniRef100_B5CQY3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
29176 RepID=B5CQY3_9FIRM
Length = 229
Score = 67.4 bits (163), Expect = 8e-10
Identities = 47/163 (28%), Positives = 85/163 (52%), Gaps = 7/163 (4%)
Frame = +2
Query: 110 SSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQE 289
++ W Y + + +VEG+ +GG+++ L GF+P +LS + I++
Sbjct: 28 ANPWNRVKEYLEKKTVLPVKVEGVVNGGVIVMVEGLRGFVPASRLSLSY--------IED 79
Query: 290 IAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSK-------YVNLGDIFIGRVCSV 448
+ +L I V+VIDVD+ + +LVLS ++ K K + +G + G V ++
Sbjct: 80 LETYLLKDI-EVQVIDVDQANNRLVLSARELLKEKEKKAREALIASIQVGSVLKGTVETL 138
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++YGAFV+L L+GL+H+S++S V+ D L G+
Sbjct: 139 QNYGAFVKLE-----NGLSGLVHVSQISQKRVKLPSDVLEVGQ 176
[165][TOP]
>UniRef100_A5KK02 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
27756 RepID=A5KK02_9FIRM
Length = 239
Score = 67.4 bits (163), Expect = 8e-10
Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 8/164 (4%)
Frame = +2
Query: 110 SSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQE 289
++ W Y + + +VEG+ +GG+++ L GF+P +LS + I++
Sbjct: 38 ANPWNLVTKYMEEKTVLPVKVEGVVNGGVIVMIEGLRGFVPASKLSLSY--------IED 89
Query: 290 IAKDMLGSILSVKVIDVDEESRKLVLS--------EKKASWSKYSKYVNLGDIFIGRVCS 445
+ +L I V+VID D+ + +LVLS EKKA + + + +G++ G V +
Sbjct: 90 LETYLLKEI-EVQVIDADQANNRLVLSARELLKEKEKKAREDQIAN-LKIGEVLEGTVET 147
Query: 446 VEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+++YGAF++L +G L+GL+H+S++S V+ D L G+
Sbjct: 148 LQNYGAFIKL--DNG---LSGLVHVSQISQKRVKLPSDVLNAGD 186
[166][TOP]
>UniRef100_Q7U5G7 30S ribosomal protein S1 homolog B, putative Nbp1 n=1
Tax=Synechococcus sp. WH 8102 RepID=Q7U5G7_SYNPX
Length = 406
Score = 67.0 bits (162), Expect = 1e-09
Identities = 42/153 (27%), Positives = 76/153 (49%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W + G + V G N GG+ L GF+P QL + +E
Sbjct: 211 WDKVKELEKHGKVVQVIVNGFNRGGVTCDLEGLRGFIPRSQLQEGDNHQE---------- 260
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V I+V+ E+RKLVLS+K+A+ + + + +G + G V +V+ YG F++L
Sbjct: 261 -LVGKTLGVAFIEVNSETRKLVLSQKRAAVAARFQELEVGQLVEGVVAAVKPYGLFIDLG 319
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ +G+
Sbjct: 320 ------GISGLLHQSSITNGSLRSIREVFDQGD 346
[167][TOP]
>UniRef100_B5VV11 RNA binding S1 domain protein n=1 Tax=Arthrospira maxima CS-328
RepID=B5VV11_SPIMA
Length = 294
Score = 67.0 bits (162), Expect = 1e-09
Identities = 45/163 (27%), Positives = 79/163 (48%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
+LR+ + W + ++ V G+N GG+ + L GF+P L
Sbjct: 95 SLRKLQVEKAWDHLSEISENSESLQVVVTGVNRGGVTVDADCLRGFIPRSHLL------- 147
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
+++ + ++G ++V V++ + + KLVLS++ AS S + +G + G V S+
Sbjct: 148 ----VRDNLEALVGETITVTVLEFNRDREKLVLSQRMASQSVSFSQLQVGQLVEGTVGSI 203
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ +G F+EL +TGLIHI EVS V + D T G+
Sbjct: 204 KPFGVFIELE------GVTGLIHIKEVSQKYVGSLPDIFTIGQ 240
[168][TOP]
>UniRef100_A7HGY4 RNA binding S1 domain protein n=1 Tax=Anaeromyxobacter sp. Fw109-5
RepID=A7HGY4_ANADF
Length = 527
Score = 66.6 bits (161), Expect = 1e-09
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 5/165 (3%)
Frame = +2
Query: 98 QARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNK 277
+A R +A +GL G V+ N GGL + + + F P Q+ V +P+
Sbjct: 218 RATRDHAREAVIEAAQTGLPVEGLVKAANKGGLEVEVHGVRAFCPMSQID-VRFVGDPST 276
Query: 278 PIQEIAKDMLGSILSVKVIDVDEE----SRKLVLSEKKASWSKYSKY-VNLGDIFIGRVC 442
+G L KV D SR+ +L E++A ++ ++ + G +F G V
Sbjct: 277 --------FVGQKLQFKVQRADARDCVLSRRALLEEERAERARATRERLAPGAVFDGVVT 328
Query: 443 SVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
SV+DYGAFV++ + GL+H+SE+SWD V +D LT G+
Sbjct: 329 SVQDYGAFVDIG------GVEGLVHVSELSWDRVSKPQDLLTAGD 367
[169][TOP]
>UniRef100_A2BVJ2 30S ribosomal protein S1 protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9515
RepID=A2BVJ2_PROM5
Length = 408
Score = 66.6 bits (161), Expect = 1e-09
Identities = 51/157 (32%), Positives = 76/157 (48%)
Frame = +2
Query: 107 RSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQ 286
R S K N+ K+ LI + G N GGL L GF+P QL E + Q
Sbjct: 208 RQSWEKVENSAKNGELIQVS-INGFNRGGLTCDVDGLRGFIPRSQL-------EDGQDYQ 259
Query: 287 EIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAF 466
+ + L V ++V+ ESRKLVLSEKKA + LG + G V ++ YG F
Sbjct: 260 SL----VNKTLKVAFLEVNPESRKLVLSEKKALLVSKFSGLKLGQLIEGEVLGIKPYGFF 315
Query: 467 VELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
V+L +GL+H S ++ ++++R+ +GE
Sbjct: 316 VDLG------GASGLLHQSSITNGSIRNLREIFEEGE 346
[170][TOP]
>UniRef100_C6X4I2 SSU ribosomal protein S1p n=1 Tax=Flavobacteriaceae bacterium
3519-10 RepID=C6X4I2_FLAB3
Length = 597
Score = 66.2 bits (160), Expect = 2e-09
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 8/189 (4%)
Frame = +2
Query: 35 DEFDTALLQRPSAPNSLD-TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFY 211
DE + + +R L + ++AR W N ++G I NG V+ GG+++ +
Sbjct: 97 DEVEVMVDRREDKSGQLQLSHKKARTLKAWDRVNELHETGEIVNGFVKSRTKGGMIVDVH 156
Query: 212 SLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK----- 376
+ FLP Q+ KPI++ +G + KV+ ++ E + +V+S K
Sbjct: 157 GIEAFLPGSQIDV--------KPIKDY-DQFVGKTMEFKVVKINPEFKNVVVSHKALIEA 207
Query: 377 --KASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQD 550
+ + + G + G V ++ YG FV+L D GLIHI+++SW V
Sbjct: 208 DLEGQKREIIGQLEKGQVLEGTVKNITSYGVFVDLGGVD------GLIHITDLSWSRVNH 261
Query: 551 VRDFLTKGE 577
+ L+ GE
Sbjct: 262 PSEILSDGE 270
Score = 58.9 bits (141), Expect = 3e-07
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS N P EI D G +
Sbjct: 221 EKGQVLEGTVKNITSYGVFVDLGGVDGLIHITDLS----WSRVNHP-SEILSD--GETVK 273
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E ++ L K+ W S + +GD G+V + DYGAFVE+
Sbjct: 274 VVILDFDDEKTRIQLGMKQLEAHPWDALSADMKIGDRVKGKVVVLADYGAFVEV-----A 328
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ DF+ G+
Sbjct: 329 PGVEGLIHVSEMSWSTHLRSAGDFVKVGD 357
[171][TOP]
>UniRef100_P74142 30S ribosomal protein S1 homolog B n=1 Tax=Synechocystis sp. PCC
6803 RepID=RS1B_SYNY3
Length = 305
Score = 66.2 bits (160), Expect = 2e-09
Identities = 40/161 (24%), Positives = 79/161 (49%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
RQ + W+ ++SG V G N GG++ L GF+P L +H
Sbjct: 98 RQLQIQQSWENLAELEESGKTLEMVVTGTNKGGVVGDVEGLRGFIPRSHL--MH------ 149
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVED 454
++ ++G +L +++ ++++ KLVL++++ ++ + G+I+ G+V ++
Sbjct: 150 ---KDNMDALVGQVLKAHILEANQDNNKLVLTQRRIQQAESMGKIAAGNIYEGKVAKIQP 206
Query: 455 YGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
YG FVE+ +TGL+H+S+VS V + G+
Sbjct: 207 YGVFVEIE------GVTGLLHVSQVSGTRVDSLNTLFAFGQ 241
[172][TOP]
>UniRef100_B0C7U0 30S ribosomal protein S1 n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0C7U0_ACAM1
Length = 289
Score = 65.9 bits (159), Expect = 2e-09
Identities = 44/136 (32%), Positives = 70/136 (51%)
Frame = +2
Query: 170 VEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEE 349
+ G+N GG+ L GF+P L ++ + +GS L+V ++VD +
Sbjct: 116 ITGVNKGGVTADVEGLRGFIPRSHLLD-----------RDNLEGQIGSQLTVTFLEVDPD 164
Query: 350 SRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEV 529
+KLVLS + A S + +G + G V ++ +GAF++L DG LTGL+HI EV
Sbjct: 165 RKKLVLSNRMAEQSSRIGELEIGQLVSGTVSDLKPFGAFIKL---DG---LTGLLHIKEV 218
Query: 530 SWDLVQDVRDFLTKGE 577
S + V ++ L GE
Sbjct: 219 SQNFVPNLSAVLKIGE 234
[173][TOP]
>UniRef100_C5UUG8 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Clostridium botulinum E1 str. 'BoNT E Beluga'
RepID=C5UUG8_CLOBO
Length = 635
Score = 65.9 bits (159), Expect = 2e-09
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Frame = +2
Query: 83 LDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSC 262
L+ +++ W++ N G + V+ G L + G L Q+S H
Sbjct: 461 LEVIKETEEEKIWESLNI----GDVIKAEVKRFTKFGAFLDVNGIDGLLHLSQISWNHV- 515
Query: 263 KEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKA---SWSKYSKYVNLGDIFIG 433
K I++I K G ++ VK+I +D+E++KL LS K+ W + G + +G
Sbjct: 516 ----KNIEDILKK--GEMIEVKIIALDKENKKLSLSRKELLPKPWENVKEKYPEGSVVLG 569
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+V + D+GAF+EL + GL+HIS++S++ + + L+ GE
Sbjct: 570 KVVRINDFGAFIELE-----PGVDGLVHISKISFNRIAHPSEVLSVGE 612
Score = 61.2 bits (147), Expect = 5e-08
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 14/168 (8%)
Frame = +2
Query: 116 DWKAANAYKDSGLIYNG------RVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNK 277
+++ AYK+ ++N +++ + GL+ + + F+P Q+ V K+ +K
Sbjct: 374 EYEKEEAYKELDTLFNEDKTFEVKIKESSENGLVAYYKGIRIFIPASQID-VKFTKDKSK 432
Query: 278 PIQEIAKDMLGSILSVKVIDVDEESRKLVLSE--------KKASWSKYSKYVNLGDIFIG 433
I ++ L VK+ID E K V++ K+ K + +N+GD+
Sbjct: 433 YINQV--------LEVKLIDYSTEEHKKVIASRRVLLEVIKETEEEKIWESLNIGDVIKA 484
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
V +GAF+++ DGL +H+S++SW+ V+++ D L KGE
Sbjct: 485 EVKRFTKFGAFLDVNGIDGL------LHLSQISWNHVKNIEDILKKGE 526
[174][TOP]
>UniRef100_C2CFD8 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CFD8_9FIRM
Length = 687
Score = 65.9 bits (159), Expect = 2e-09
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 4/185 (2%)
Frame = +2
Query: 35 DEFDTALLQRPSAPNSLD-TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFY 211
DE D +++ ++ + R+ W+ ++ + +G V N GGL +
Sbjct: 344 DEIDVFVIKLDDGEGNVALSTRRVEGMKVWQELAQKAENDELVHGEVVSFNKGGLTVNVN 403
Query: 212 SLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWS 391
+ GF+P Q++ + K +G +K+I +DE +LVLS K
Sbjct: 404 GVNGFVPASQIATY---------FVKNFKKFVGEQWDLKIISIDERKNRLVLSRKDVVEE 454
Query: 392 KYSKY---VNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDF 562
+ + G + G+V + D+GAFVE+ L GL+H+S+++W V+ D
Sbjct: 455 ELDNLWDELEEGQVVKGKVARLTDFGAFVEVN------GLDGLLHVSDIAWSRVEHPSDV 508
Query: 563 LTKGE 577
L+ G+
Sbjct: 509 LSVGD 513
Score = 58.5 bits (140), Expect = 4e-07
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G+V + G + L G L ++ + P+ + +G +
Sbjct: 464 EEGQVVKGKVARLTDFGAFVEVNGLDGLLHVSDIA-WSRVEHPSDVLS------VGDEIE 516
Query: 323 VKVIDVDEESRKLVLSEKKASWSKYSKYVN---LGDIFIGRVCSVEDYGAFVELRFPDGL 493
VK++ +++E ++ L K+ + + N +GD+ G+V ++ D+GAFVE+ DG+
Sbjct: 517 VKILKLNQEKNRISLGRKQLLEKPFEAFANHHEVGDVVTGKVVNLLDFGAFVEVA--DGV 574
Query: 494 YHLTGLIHISEVSWDLVQDVRDFLTKGE 577
GL+H+SE+SW+ V+ D L G+
Sbjct: 575 ---EGLVHVSEISWEHVEKPSDELNVGD 599
[175][TOP]
>UniRef100_C0YIM5 30S ribosomal protein S1 n=1 Tax=Chryseobacterium gleum ATCC 35910
RepID=C0YIM5_9FLAO
Length = 596
Score = 65.9 bits (159), Expect = 2e-09
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Frame = +2
Query: 35 DEFDTALLQRPSAPNSLD-TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFY 211
DE + + +R L + R+AR W N ++G I NG V+ GG+++ +
Sbjct: 97 DEVEVMVDKREDKTGQLQLSHRKARTLKAWDKVNELHETGEIVNGFVKSRTKGGMIVDVH 156
Query: 212 SLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK----- 376
+ FLP Q+ KPI++ +G + KV+ ++ E + +V+S K
Sbjct: 157 GIEAFLPGSQIDV--------KPIKDY-DQFVGKTMEFKVVKINPEFKNVVVSHKALIEA 207
Query: 377 --KASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQD 550
+ + + G + G V ++ YG F++L D GLIHI+++SW V
Sbjct: 208 DIEGQKKEIIAQLEKGQVLEGTVKNITSYGVFIDLGGVD------GLIHITDLSWSRVNH 261
Query: 551 VRDFLTKGE 577
+ L G+
Sbjct: 262 PSEILEDGQ 270
Score = 60.1 bits (144), Expect = 1e-07
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Frame = +2
Query: 134 AYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGS 313
A + G + G V+ I S G+ + + G + LS N P EI +D G
Sbjct: 218 AQLEKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS----WSRVNHP-SEILED--GQ 270
Query: 314 ILSVKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFP 484
+ V ++D D+E ++ L K+ W S + +GD G+V + DYGAFVE+
Sbjct: 271 TVKVVILDFDDEKTRIQLGMKQLEAHPWDALSADLKVGDKVKGKVVVLADYGAFVEI--- 327
Query: 485 DGLYHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ DF+ G+
Sbjct: 328 --APGVEGLIHVSEMSWSTHLRSAGDFVKVGD 357
[176][TOP]
>UniRef100_Q10MB3 30S ribosomal protein S1, chloroplast, putative, expressed n=1
Tax=Oryza sativa Japonica Group RepID=Q10MB3_ORYSJ
Length = 380
Score = 65.9 bits (159), Expect = 2e-09
Identities = 38/144 (26%), Positives = 74/144 (51%)
Frame = +2
Query: 59 QRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYP 238
+ P + +L+ ++ W+ + ++ G+V G N GG++ L GF+P+
Sbjct: 148 ENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKGGVVALVEGLKGFVPFS 207
Query: 239 QLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLG 418
Q+S + A+++L L +K ++VDEE +LVLS +KA ++ + +G
Sbjct: 208 QVSS-----------KSTAEELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQAQ-LGIG 255
Query: 419 DIFIGRVCSVEDYGAFVELRFPDG 490
+ +G V S++ YGAF+++ G
Sbjct: 256 SVVLGTVESLKPYGAFIDIVLQPG 279
[177][TOP]
>UniRef100_Q2RIU7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Moorella
thermoacetica ATCC 39073 RepID=Q2RIU7_MOOTA
Length = 736
Score = 65.5 bits (158), Expect = 3e-09
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+A R W+ + SG G V + GGLL+ + GFLP +
Sbjct: 434 RRADRRVAWEKLEEHLASGEEIQGEVIEVVKGGLLVDV-GVRGFLPASLVE--------- 483
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKY-------VNLGDIFIG 433
+ E LG L ++VI++D K+VLS K +Y K + +G + G
Sbjct: 484 RGYVEDLNAYLGQTLRLRVIELDRSKNKVVLSRKAILEEEYEKQRQATWNSLEVGQVRKG 543
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
V + ++GAFV+L DGL +H+SE+SW V+ RD L++G+
Sbjct: 544 IVRRLTNFGAFVDLGGVDGL------LHVSEISWGRVEHPRDALSEGQ 585
[178][TOP]
>UniRef100_B2UME1 Ribosomal protein S1 n=1 Tax=Akkermansia muciniphila ATCC BAA-835
RepID=B2UME1_AKKM8
Length = 562
Score = 65.5 bits (158), Expect = 3e-09
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Frame = +2
Query: 5 SSSSSNDTQIDEFDT--ALLQRPSAPNSLDTL--RQARRSSDW-KAANAYKDSGLIYNGR 169
S S D +I+ D LL+R + L +A +W K Y+D GL+ G+
Sbjct: 48 SISEFEDEEIEVGDQIEVLLERLENDEGIVVLSKEKAAHKQNWDKIVGVYRDGGLV-KGK 106
Query: 170 VEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEE 349
V+ + GGL++ + FLP Q+ + P + + E +G + K++ V+++
Sbjct: 107 VKSVVKGGLMVNV-GVEAFLPGSQVDII-----PPRDLNEY----VGKVYEFKIVKVNDD 156
Query: 350 SRKLVLS-------EKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTG 508
+ +VLS E+ ++ + V GD G V ++ D+GAFV+LR D G
Sbjct: 157 RKNIVLSRREVIEAERADQRQRFLETVKEGDKVEGIVKNITDFGAFVDLRGMD------G 210
Query: 509 LIHISEVSWDLVQDVRDFLTKGE 577
L+HI+++SW V + L G+
Sbjct: 211 LLHITDMSWGRVNHPSEMLHIGQ 233
[179][TOP]
>UniRef100_C9LAT8 Ribosomal protein S1 n=1 Tax=Blautia hansenii DSM 20583
RepID=C9LAT8_RUMHA
Length = 250
Score = 65.5 bits (158), Expect = 3e-09
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W K+ + VEGI GG++ + F+P +L+ ++ + P +
Sbjct: 50 WDKLEQMKEDKTEFEVSVEGIVKGGVIAYVEGIRAFIPVSKLA-LNYVENP--------E 100
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEK-----KASWSKYSKY--VNLGDIFIGRVCSVEDY 457
D L ++V+V +VDE+ +LVLS K KA K SK + +G I G V S++ Y
Sbjct: 101 DFLKKTITVRVFEVDEQENRLVLSAKEILKEKADAEKRSKIDDIKVGSIVEGTVESLQTY 160
Query: 458 GAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
GAF++L DG ++GL+H+S++S ++ + L+ G+
Sbjct: 161 GAFIDL--GDG---ISGLVHVSQISEKRIKSPKAVLSIGD 195
[180][TOP]
>UniRef100_C5F0P9 30S ribosomal protein S1 n=1 Tax=Helicobacter pullorum MIT 98-5489
RepID=C5F0P9_9HELI
Length = 551
Score = 65.5 bits (158), Expect = 3e-09
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 7/156 (4%)
Frame = +2
Query: 131 NAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLS---PVHSCKEPNKPIQEIAKD 301
N K G + GR++ I S G+ + + G + Y ++S PV+ P+K +E
Sbjct: 191 NLLKQEGNL-KGRIKKITSFGMFVDVEGVEGLVHYTEISHKGPVN----PSKLYKE---- 241
Query: 302 MLGSILSVKVIDVDEESRKLVLSEKKA---SWSKYSKYVNLGDIFIGRVCSVEDYGAFVE 472
G I+S+KV+ D+E R+L LS K W + + +GD V ++E YG FV+
Sbjct: 242 --GDIVSLKVLSYDKEKRRLALSIKDTIEDPWKEVENELEVGDAIKVVVSNIEPYGVFVD 299
Query: 473 LRFPDGLYHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
L + G +HISE+SW+ +Q+ +FL G+
Sbjct: 300 LG-----NDIEGFLHISEISWNKNIQNPEEFLKTGQ 330
[181][TOP]
>UniRef100_A5ZTQ9 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
29174 RepID=A5ZTQ9_9FIRM
Length = 301
Score = 65.5 bits (158), Expect = 3e-09
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSP--VHSCKEP-NKPIQE 289
W K+SG + + V+GI + G++ + GF+P +L+ V +E NKPIQ
Sbjct: 99 WDKLKELKESGEVLDVVVKGITNAGVIAYVEGVRGFIPASKLALNYVEDTEEYLNKPIQ- 157
Query: 290 IAKDMLGSILSVKVIDVDEESRKLVLSEK-----KASWSKYSKYVNL--GDIFIGRVCSV 448
V+V+DVD+ES+KL+LS K KA + +K NL G + G V S+
Sbjct: 158 -----------VQVLDVDKESKKLILSAKEILRAKAEEERKNKVSNLEIGLVTEGTVESL 206
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ YGAFV L L+GL+HIS++ ++ + L G+
Sbjct: 207 QPYGAFVNLG-----NGLSGLVHISQICEKRIKKPSEVLAVGD 244
[182][TOP]
>UniRef100_A6Q7Q1 30S ribosomal protein S1 n=1 Tax=Sulfurovum sp. NBC37-1
RepID=A6Q7Q1_SULNB
Length = 552
Score = 65.1 bits (157), Expect = 4e-09
Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Frame = +2
Query: 164 GRVEGINSGGLLLRFYSLMGFLPYPQLS---PVHSCKEPNKPIQEIAKDMLGSILSVKVI 334
G ++ I S G+ + + G + Y Q+S PV+ P+K QE G ++V +
Sbjct: 201 GTIKKITSYGMFVDVGGMDGLVHYSQISHKGPVN----PSKYFQE------GDEVNVIAL 250
Query: 335 DVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLT 505
D D++ R L LS K A+ W+ + +GD V ++E YG FV+L L
Sbjct: 251 DYDKKKRHLSLSIKDANPDPWADIDSIIGVGDTVTATVSNIEPYGVFVDLG-----EDLE 305
Query: 506 GLIHISEVSWDL-VQDVRDFLTKGE 577
+H+SE+SWD V+ +D+LT GE
Sbjct: 306 AFLHVSEISWDKNVKHPKDYLTNGE 330
Score = 54.3 bits (129), Expect = 7e-06
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Frame = +2
Query: 215 LMGFLPYPQLSPVHSCKEPNKPIQEIAKDML--GSILSVKVIDVDEESRKLVLSEKKA-- 382
L FL ++S + K P KD L G ++V+VI+VD+E R+L +S K
Sbjct: 304 LEAFLHVSEISWDKNVKHP--------KDYLTNGEEINVEVIEVDKEGRRLRVSLKSLLP 355
Query: 383 -SWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRD 559
+++ +GD+ G V S+ D+GAFV++ + GL+H E+SWD ++ +
Sbjct: 356 KPMDAFTQQYRVGDVVKGTVTSITDFGAFVKVG------SVEGLLHNQEISWDKSKNAKS 409
Query: 560 FLTKGE 577
L G+
Sbjct: 410 ELAVGD 415
[183][TOP]
>UniRef100_C7QUH8 RNA binding S1 domain protein n=2 Tax=Cyanothece RepID=C7QUH8_CYAP0
Length = 302
Score = 65.1 bits (157), Expect = 4e-09
Identities = 39/161 (24%), Positives = 75/161 (46%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
RQ + W+ ++G RV G N GG++ L GF+P L
Sbjct: 103 RQLQLQQAWEKVAEIAETGKTVQMRVIGTNKGGVIGDVEGLRGFIPRSHLLE-------- 154
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVED 454
++ ++G +L+ ++V+ + KLVLS+++ + + G++ G+V ++
Sbjct: 155 ---KDNLDALVGQLLTANFLEVNPDDNKLVLSQRRVIMAAQMDKITAGNLITGKVAKIQP 211
Query: 455 YGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
YG FV+L +TGL+HI+++S + D+ G+
Sbjct: 212 YGIFVDLN------GVTGLLHITQISGLRIDDLNTLFKFGQ 246
[184][TOP]
>UniRef100_C0QZM2 30S ribosomal protein S1 n=1 Tax=Brachyspira hyodysenteriae WA1
RepID=C0QZM2_BRAHW
Length = 554
Score = 64.7 bits (156), Expect = 5e-09
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 5/153 (3%)
Frame = +2
Query: 131 NAYKDSGLIYNGRVEGINSGGLLLRFY-SLMGFLPYPQLSPVHSCKEPNKPIQEIAKDML 307
N K++ +I NG+V+ I G + GFL P +S + P I+K
Sbjct: 187 NNLKENDII-NGKVKNIEKFGAFIEITPGFDGFLAIPNMS----WDKVVNPKSVISK--- 238
Query: 308 GSILSVKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
G KV+ +D+E+RK+ L K+ W K+ + ++GDI G V +V+ +GAFV++
Sbjct: 239 GEERMFKVLHIDKENRKVDLGLKQLDEDPWGKFVEQYHIGDIINGEVTNVKKFGAFVKV- 297
Query: 479 FPDGLYHLTGLIHISEVSWDL-VQDVRDFLTKG 574
DG + GL+H+S++SW+ V + DF+ KG
Sbjct: 298 -ADG---IEGLVHVSDLSWNSHVNNPSDFVKKG 326
[185][TOP]
>UniRef100_B1LBI3 RNA binding S1 domain protein n=1 Tax=Thermotoga sp. RQ2
RepID=B1LBI3_THESQ
Length = 543
Score = 64.7 bits (156), Expect = 5e-09
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 4/157 (2%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFY-SLMGFLPYPQLSPVHSCKEPNKPIQEIA 295
W+ G + NG V I+ G +R + G +P ++ ++ K ++E+
Sbjct: 262 WEKVEEKYPVGKVVNGEVISIHPFGFFVRLEPGVEGLVPRSEVFWGNT----RKSLEEVV 317
Query: 296 KDMLGSILSVKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAF 466
G ++ V+VI+VD+E+RKL LS KKA W N+ ++ G+V + GAF
Sbjct: 318 S--AGDLVKVEVINVDKENRKLTLSYKKAKGDPWENIEDRYNVNNVVTGKVTGIIKQGAF 375
Query: 467 VELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
VEL +G + G + +SE+SW + + + L GE
Sbjct: 376 VELE--EG---VEGFVPVSEISWKRIDEPGEILKIGE 407
[186][TOP]
>UniRef100_Q83HP3 30s ribosomal protein S1 n=1 Tax=Tropheryma whipplei TW08/27
RepID=Q83HP3_TROW8
Length = 473
Score = 64.3 bits (155), Expect = 6e-09
Identities = 53/168 (31%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
++A+ W KDS L G+V I GGL++ L GFLP L + ++
Sbjct: 98 KRAQYEKAWSDLEKIKDSDLTVTGKVIEIVRGGLIVDI-GLRGFLP-ASLIDIRRVRD-- 153
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLS-----EKKASWSKYSKYVNL--GDIFIG 433
LG + KV+++D + +VLS E+ S ++ S + NL G + G
Sbjct: 154 ------LSSYLGMEIEAKVLELDRQRNNVVLSRRVLLEQNQSEARTSLFGNLHKGQVRKG 207
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
V S+ +GAFV+L D GL+HISE+SW V + L GE
Sbjct: 208 TVSSIVSFGAFVDLGGID------GLVHISEISWKHVTQPSEVLKVGE 249
[187][TOP]
>UniRef100_Q83GI6 30S ribosomal protein S1 n=1 Tax=Tropheryma whipplei str. Twist
RepID=Q83GI6_TROWT
Length = 473
Score = 64.3 bits (155), Expect = 6e-09
Identities = 53/168 (31%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
++A+ W KDS L G+V I GGL++ L GFLP L + ++
Sbjct: 98 KRAQYEKAWSDLEKIKDSDLTVTGKVIEIVRGGLIVDI-GLRGFLP-ASLIDIRRVRD-- 153
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLS-----EKKASWSKYSKYVNL--GDIFIG 433
LG + KV+++D + +VLS E+ S ++ S + NL G + G
Sbjct: 154 ------LSSYLGMEIEAKVLELDRQRNNVVLSRRVLLEQNQSEARTSLFGNLHKGQVRKG 207
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
V S+ +GAFV+L D GL+HISE+SW V + L GE
Sbjct: 208 TVSSIVSFGAFVDLGGID------GLVHISEISWKHVTQPSEVLKVGE 249
[188][TOP]
>UniRef100_Q7VD53 Ribosomal protein S1 n=1 Tax=Prochlorococcus marinus
RepID=Q7VD53_PROMA
Length = 417
Score = 64.3 bits (155), Expect = 6e-09
Identities = 39/137 (28%), Positives = 73/137 (53%)
Frame = +2
Query: 167 RVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDE 346
++ G N GG+ L GF+P QL+ + + ++G ++V I+V
Sbjct: 238 KLNGFNRGGVTCDLEGLRGFIPRSQLNQ-----------GDDHESLVGKTINVAFIEVSP 286
Query: 347 ESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISE 526
++RKL+LSEKKA+ + + +G + G+V SV+ YG FV+L ++GL+H S
Sbjct: 287 DNRKLILSEKKAATAAKFAELEVGQLIEGKVISVKPYGFFVDLG------GISGLLHQSM 340
Query: 527 VSWDLVQDVRDFLTKGE 577
++ ++ +R+ +G+
Sbjct: 341 ITNGSLRSLREVFNQGD 357
[189][TOP]
>UniRef100_A7H3F4 Ribosomal protein S1 n=1 Tax=Campylobacter jejuni subsp. doylei
269.97 RepID=A7H3F4_CAMJD
Length = 556
Score = 64.3 bits (155), Expect = 6e-09
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 4/167 (2%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
TL R+ +N + LI G V+ I + G+ + S+ G + Y ++S K
Sbjct: 184 TLDDERKKRKELISNIVQQENLI-EGIVKKITTYGMFVDVGSVDGLVHYSEIS----YKG 238
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKA---SWSKYSKYVNLGDIFIGRV 439
P P + K+ G + VKVI D+E + L LS K A WS+ +++GD V
Sbjct: 239 PVNP-GTLYKE--GDKVPVKVIKYDKERKHLSLSVKAALPDPWSEIKDTLDVGDTIKVIV 295
Query: 440 CSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
++E YGAFV+L + G +HISE+SWD +++ +D++ KG+
Sbjct: 296 SNIEPYGAFVDLG-----NDIEGFLHISEISWDKNIKNPKDYINKGQ 337
Score = 55.1 bits (131), Expect = 4e-06
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Frame = +2
Query: 155 IYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVI 334
+ G + + S G ++ + G L S + K +K Q G + VK+I
Sbjct: 377 VVEGEITSVTSFGAFVKLGGIEGLLHNEDASWDRNDKCKDKFSQ-------GDKIKVKII 429
Query: 335 DVDEESRKLVLSEKKASWS---KYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLT 505
+DEE++K+ LS K+ S S +Y+K +GDI G + ++D+G FVEL ++
Sbjct: 430 KIDEENQKISLSTKELSSSPVQEYAKIHKVGDIVKGTIRDIKDFGVFVELS-----KNVD 484
Query: 506 GLIHISEVSWDLVQDVR 556
LIH ++S ++++++
Sbjct: 485 ALIHKEDISTSMLENLK 501
[190][TOP]
>UniRef100_C3XMA9 30s ribosomal protein s1 n=1 Tax=Helicobacter winghamensis ATCC
BAA-430 RepID=C3XMA9_9HELI
Length = 560
Score = 64.3 bits (155), Expect = 6e-09
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 4/153 (2%)
Frame = +2
Query: 131 NAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLG 310
N K++G + G+V+ I S G+ + + G + Y ++S K P P + +D
Sbjct: 200 NLLKENGTL-EGKVKKITSFGMFVDVNGVEGLVHYTEIS----YKGPVNPSKLYKED--- 251
Query: 311 SILSVKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRF 481
I+ +KV++ D++ R+L LS K + W + + +GD V ++E YG FV+L
Sbjct: 252 DIVPIKVLNYDKDKRRLALSIKATAEDPWREVENELEVGDAIKVTVSNIEPYGVFVDLG- 310
Query: 482 PDGLYHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ G +HISE+SW+ +Q+ +FL G+
Sbjct: 311 ----NDIEGFLHISEISWNKNIQNPEEFLKVGQ 339
[191][TOP]
>UniRef100_A0ZM63 30S ribosomal protein S1 n=1 Tax=Nodularia spumigena CCY9414
RepID=A0ZM63_NODSP
Length = 284
Score = 64.3 bits (155), Expect = 6e-09
Identities = 40/153 (26%), Positives = 74/153 (48%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W+ + G RV G+N GG+ + SL GF+P L+ ++ +
Sbjct: 95 WERLTEMNEGGQTVQVRVTGVNKGGVTVDILSLRGFIPRSHLAE-----------RDNLE 143
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
+ G L+V ++++ + KL+LS++ A+ S + L + GRV ++ +G FV+L
Sbjct: 144 ALKGQSLTVAFLEINRNTNKLILSQRLATRSSSFSLLQLNQLVEGRVTGIKPFGIFVDL- 202
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
DG L+ L+HI +VS ++ + G+
Sbjct: 203 --DG---LSALLHIKQVSQKYIESLEKVFQIGQ 230
[192][TOP]
>UniRef100_Q2JN47 Putative ribosomal protein S1 n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JN47_SYNJB
Length = 304
Score = 63.9 bits (154), Expect = 8e-09
Identities = 47/180 (26%), Positives = 85/180 (47%)
Frame = +2
Query: 38 EFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSL 217
E + +L+ + + + R+ R W+ + +G V N GG+++ L
Sbjct: 82 EAEFLILREDAEGQIVLSARRLRLKRLWEELAQKQANGQTVTVPVIATNKGGVVVDVQGL 141
Query: 218 MGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKY 397
GF+P LS +E ++++G L+ I+V+ E+ KLVLS++ A S+
Sbjct: 142 RGFIPRSHLSQ-----------REGLEELVGQSLTASFIEVNPEANKLVLSQRAAVKSEN 190
Query: 398 SKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G + G+V ++ +G FV+L +G +TGL+HI +VS V + D G+
Sbjct: 191 LSRYTSGQVVEGKVSGLKPFGVFVDLE--EG---VTGLLHIKQVSQSFVASLPDLFKPGQ 245
[193][TOP]
>UniRef100_B2V2E2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Clostridium botulinum E3 str. Alaska E43
RepID=B2V2E2_CLOBA
Length = 635
Score = 63.9 bits (154), Expect = 8e-09
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Frame = +2
Query: 83 LDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSC 262
L+ +++ W++ N G + V+ G L + G L Q+S H
Sbjct: 461 LEVIKETEEEKIWESLNV----GDVIKAEVKRFTKFGAFLDVNGIDGLLHLSQISWNHV- 515
Query: 263 KEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKA---SWSKYSKYVNLGDIFIG 433
K I++I K ++ VK+I +D+E++KL LS K+ W + G I +G
Sbjct: 516 ----KNIEDILKK--DEMIEVKIIALDKENKKLSLSRKELLPKPWENVKEKYPEGSIVLG 569
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+V + D+GAF+EL + GL+HIS++S++ + + L+ GE
Sbjct: 570 KVVRINDFGAFIELE-----PGVDGLVHISKISFNRIAHPSEVLSVGE 612
Score = 58.2 bits (139), Expect = 5e-07
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Frame = +2
Query: 116 DWKAANAYKDSGLIYNG------RVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNK 277
+++ AYK+ ++N +++ + GL+ + + F+P Q+ V K+ +K
Sbjct: 374 EYEKEEAYKELDTLFNEDKTFEVKIKESSENGLVAYYKGIRIFIPASQID-VKFTKDKSK 432
Query: 278 PIQEIAKDMLGSILSVKVIDVDEESRKLVLSE--------KKASWSKYSKYVNLGDIFIG 433
I ++ L VK+ID E K V++ K+ K + +N+GD+
Sbjct: 433 YINQV--------LEVKLIDYSTEEHKKVIASRRVLLEVIKETEEEKIWESLNVGDVIKA 484
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
V +GAF+++ DGL +H+S++SW+ V+++ D L K E
Sbjct: 485 EVKRFTKFGAFLDVNGIDGL------LHLSQISWNHVKNIEDILKKDE 526
[194][TOP]
>UniRef100_C9PYY2 30S ribosomal protein S1 (Fragment) n=1 Tax=Prevotella sp. oral
taxon 472 str. F0295 RepID=C9PYY2_9BACT
Length = 514
Score = 63.9 bits (154), Expect = 8e-09
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
++AR S W+ NA ++ + G ++ GG+++ + + FLP Q+ VH ++ +
Sbjct: 31 KKARLSKSWERVNAALENEEVIQGYIKCRTKGGMIVDVFGIEAFLPGSQID-VHPIRDYD 89
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK-------KASWSKYSKYVNLGDIFIG 433
+G + KV+ +++E R +V+S K +A + + G I G
Sbjct: 90 V--------FVGKTMEFKVVKINQEFRNVVVSHKALIEEELEAQKKEIISKLEKGQILEG 141
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLT 568
V ++ YG FV+L D GLIHI+++SW V D + ++
Sbjct: 142 TVKNITTYGVFVDLGGVD------GLIHITDLSWGRVSDPHEVVS 180
Score = 61.2 bits (147), Expect = 5e-08
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G I G V+ I + G+ + + G + LS +P++ + L ++
Sbjct: 134 EKGQILEGTVKNITTYGVFVDLGGVDGLIHITDLS-WGRVSDPHEVVS------LDQKIN 186
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E R++ L K+ + W + +N+GD G+V + DYGAFVE+
Sbjct: 187 VVILDFDDEKRRIALGLKQLTPHPWDALDQSLNVGDHVKGKVVVIADYGAFVEI-----A 241
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 242 PGVEGLIHVSEMSWSQHLRSAQDFMHVGD 270
[195][TOP]
>UniRef100_C9M527 Ribosomal protein S1 n=1 Tax=Jonquetella anthropi E3_33 E1
RepID=C9M527_9BACT
Length = 500
Score = 63.9 bits (154), Expect = 8e-09
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 9/190 (4%)
Frame = +2
Query: 35 DEFDTALLQRPSAPNSLDTLRQARRSSDWKAANA--YKDS--GLIYNGRVEGINSGGLLL 202
+EF+ LL++ L R+ D A Y++ G + +G V + S G +
Sbjct: 156 EEFEVCLLEKDKRKRRLVLSRRVLLDKDLNARREEFYQNVKVGDVVDGTVSSLTSFGAFV 215
Query: 203 RFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDML--GSILSVKVIDVDEESRKLVLSEK 376
+ G + ++S S K KD+L G + VKVI +D E+ K+ LS +
Sbjct: 216 NVGPIDGLVHLSEISWQRSAK---------IKDLLKKGDEVKVKVIGIDRENNKISLSMR 266
Query: 377 KAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
+ W ++ G G V +V D+GAFVE+ + GL+HI ++SW ++
Sbjct: 267 QVQGDPWDTVTERWTKGQTTTGVVTNVTDFGAFVEVE-----PGIEGLVHIGDLSWARIK 321
Query: 548 DVRDFLTKGE 577
RD + KG+
Sbjct: 322 HPRDVIRKGQ 331
Score = 59.7 bits (143), Expect = 2e-07
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Frame = +2
Query: 167 RVEGINS--GGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDV 340
+V+G+ GGL++ SL GF+P L+ P + +E V +++
Sbjct: 114 KVKGLRKVKGGLIVDCCSLEGFIPISHLAAEGRGVNPGRFEEEE--------FEVCLLEK 165
Query: 341 DEESRKLVLSEK-------KASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYH 499
D+ R+LVLS + A ++ + V +GD+ G V S+ +GAFV +
Sbjct: 166 DKRKRRLVLSRRVLLDKDLNARREEFYQNVKVGDVVDGTVSSLTSFGAFVNVG------P 219
Query: 500 LTGLIHISEVSWDLVQDVRDFLTKGE 577
+ GL+H+SE+SW ++D L KG+
Sbjct: 220 IDGLVHLSEISWQRSAKIKDLLKKGD 245
[196][TOP]
>UniRef100_C8PL52 30S ribosomal protein S1 n=1 Tax=Campylobacter gracilis RM3268
RepID=C8PL52_9PROT
Length = 555
Score = 63.9 bits (154), Expect = 8e-09
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Frame = +2
Query: 2 SSSSSSNDTQIDEFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEG- 178
S+ + N F +++ S+ R+ D KA+ + + G +EG
Sbjct: 146 SALKNPNGAVGKNFKVKIIKVDRDEQSIVVSRKKLLDEDRKASKEAIEKVIATEGIIEGV 205
Query: 179 ---INSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEE 349
I + G+ + + G + Y ++S K P P + K+ G + VKVI D +
Sbjct: 206 VKKITTYGMFVDVGGVDGLVHYSEIS----YKGPVNP-SSLYKE--GDKVPVKVIKYDND 258
Query: 350 SRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHI 520
+ L LS K+A W++ + +GD +V ++E YGAFV+L + G +HI
Sbjct: 259 KKHLSLSIKEAMPDPWNEIKDSLEVGDTIRVKVSNIEPYGAFVDLG-----NDIEGFLHI 313
Query: 521 SEVSWDL-VQDVRDFLTKGE 577
SE+SWD +++ +DF+++GE
Sbjct: 314 SEISWDKNIKNPKDFISEGE 333
[197][TOP]
>UniRef100_C1QBZ2 SSU ribosomal protein S1P n=1 Tax=Brachyspira murdochii DSM 12563
RepID=C1QBZ2_9SPIR
Length = 554
Score = 63.9 bits (154), Expect = 8e-09
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Frame = +2
Query: 92 LRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFY-SLMGFLPYPQLSPVHSCKE 268
L + + +S N K++ +I NG+V+ I G + GFL P +S +
Sbjct: 174 LEETQNASIESFLNNLKENDII-NGKVKNIEKFGAFIEITPGFDGFLAIPNMS----WDK 228
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRV 439
P I+K G KV+ +D+E++K+ L K+ W K+ + ++GD+ G V
Sbjct: 229 VINPKSIISK---GEERMFKVLHIDKENKKVDLGIKQLDEDPWGKFVEQYHIGDVIQGEV 285
Query: 440 CSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDL-VQDVRDFLTKG 574
+V+ +GAFV++ DG + GL+H+S++SW+ V + DF+ KG
Sbjct: 286 TNVKKFGAFVKV--ADG---IEGLVHVSDLSWNSHVNNPSDFVKKG 326
[198][TOP]
>UniRef100_B5JH58 Ribosomal protein S1 n=1 Tax=Verrucomicrobiae bacterium DG1235
RepID=B5JH58_9BACT
Length = 549
Score = 63.9 bits (154), Expect = 8e-09
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 7/174 (4%)
Frame = +2
Query: 77 NSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVH 256
N L + +A + +W+ + G I GRV+G GGL++ + FLP H
Sbjct: 73 NPLLSFDKAEQKKNWENIITKCEEGSIVQGRVKGKVKGGLIVAM-GVDAFLPAS-----H 126
Query: 257 SCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLS------EKKASWSK-YSKYVNL 415
+P K + + +G KV+ ++ E + +VLS E++AS + + VN
Sbjct: 127 IDIQPPKNLDQY----IGQTYDYKVLKINLERKNIVLSRRELIEEQRASKRRDLLERVNP 182
Query: 416 GDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
GD+ G V ++ D+GAF++L DG + GL+HI+++SW + + L +GE
Sbjct: 183 GDVVKGVVKNITDFGAFIDL---DG---MDGLLHITDMSWGRISHPSEMLKQGE 230
[199][TOP]
>UniRef100_A3Z5H4 30S ribosomal protein S1-like B, putative n=1 Tax=Synechococcus sp.
RS9917 RepID=A3Z5H4_9SYNE
Length = 432
Score = 63.9 bits (154), Expect = 8e-09
Identities = 41/153 (26%), Positives = 73/153 (47%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W + G + + G N GG+ L GF+P L E +
Sbjct: 237 WDKVKELEKQGKVVQVTISGFNRGGVTCDLEGLRGFIPRSHLQD-----------GENHE 285
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
++G L V ++V+ E+RKLVLSEK+A+ + + +G + G V +V+ YG FV+L
Sbjct: 286 ALVGKTLGVAFLEVNAETRKLVLSEKRAATAARFAELEVGQLVEGTVVAVKPYGFFVDLG 345
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++GL+H S ++ ++ +R+ +G+
Sbjct: 346 ------GISGLLHQSMITGGSMRSLREVFDQGD 372
[200][TOP]
>UniRef100_B7K791 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7424
RepID=B7K791_CYAP7
Length = 284
Score = 63.5 bits (153), Expect = 1e-08
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
RQ W +SG RV GIN GG+ L GF+P L
Sbjct: 87 RQLIIKQAWNQVKEIAESGTSVQMRVTGINRGGVTGEVEGLRGFIPRSHLVE-------- 138
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVED 454
+E ++G ++ I VD ++ KLVLS+++ + + +G + G+V ++
Sbjct: 139 ---KEDLDSLVGQSITANFIQVDPDNNKLVLSQRQLVRAAAMSQLTIGTLVEGKVAKIQP 195
Query: 455 YGAFVELRFPDGLYHLTGL--IHISEVS 532
YG FV++ GL H+T + +HI ++
Sbjct: 196 YGVFVDINGATGLLHITQVSGVHIDALT 223
[201][TOP]
>UniRef100_B0JPE8 Nucleic acid-binding protein n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JPE8_MICAN
Length = 293
Score = 63.5 bits (153), Expect = 1e-08
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Frame = +2
Query: 38 EFDTALLQRPSAPNSLD-TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYS 214
EFD + + A + +LRQ W+ +SG RV G+N GG+
Sbjct: 75 EFDFLITRGQDAEGQVTLSLRQLLLQKAWENVREISESGKSVQLRVTGVNKGGVTGEVEG 134
Query: 215 LMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSK 394
L GF+P L + ++G +L+ I +D+E+ KLVLS+++ + +
Sbjct: 135 LKGFIPRSHLIEKNDLDS-----------LIGQLLTATFIQIDQENNKLVLSQREIARAN 183
Query: 395 YSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVS 532
+ +G + G V ++ YG FV+ +TGL+H +V+
Sbjct: 184 AISQLAVGKLLSGTVVKLQPYGVFVDCG------GVTGLLHAKQVT 223
[202][TOP]
>UniRef100_C7H149 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1
Tax=Eubacterium saphenum ATCC 49989 RepID=C7H149_9FIRM
Length = 703
Score = 63.5 bits (153), Expect = 1e-08
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 9/190 (4%)
Frame = +2
Query: 35 DEFDTALLQRPSAPNS-LDTLRQARRSSDW-KAANAYKDSGLIYNGRVEGINSGGLLLRF 208
DE +L+ S L + R+ S W + +A + + V + SG ++ +
Sbjct: 370 DEIQAKVLKTDDGDGSILLSRRKMEASVHWAELEDALNNDETVKVDVVRAVKSG-VIANY 428
Query: 209 YSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLS------ 370
+ GF+P QLS + E A + +G + KVI VD++ K + S
Sbjct: 429 KEVSGFIPLSQLS---------ERFIEDASEFVGQTMEAKVIRVDQKLGKAIFSPKQLQK 479
Query: 371 -EKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQ 547
EK + K +N+GD G+V +YGAFV++ D GL+HISE+SW ++
Sbjct: 480 EEKNKRLQELWKKLNVGDDIEGKVMRFTEYGAFVDIGGVD------GLLHISEISWGKLK 533
Query: 548 DVRDFLTKGE 577
+ LT G+
Sbjct: 534 HPSEVLTVGD 543
[203][TOP]
>UniRef100_A5IME0 RNA binding S1 domain protein n=2 Tax=Thermotogaceae
RepID=A5IME0_THEP1
Length = 543
Score = 63.5 bits (153), Expect = 1e-08
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFY-SLMGFLPYPQLSPVHSCKEPNKPIQEIA 295
W+ G + G V I+S G +R + G +P ++ ++ K ++E+
Sbjct: 262 WEKVKEKYPVGKVVGGEVISIHSFGFFVRLEPGVEGLVPRSEVFWGNA----RKNLEEVV 317
Query: 296 KDMLGSILSVKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAF 466
+G ++ V+VI+VD+E+RKL LS +KA W N+ ++ G+V + GAF
Sbjct: 318 S--VGDLVKVEVINVDKENRKLTLSYRKAKGDPWENIEDRYNVNNVVTGKVTGIIKQGAF 375
Query: 467 VELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
VEL +G + G + +SE+SW + + + L GE
Sbjct: 376 VELE--EG---VEGFVPVSEISWKRIDEPGEILKIGE 407
[204][TOP]
>UniRef100_B1QXL7 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2
Tax=Clostridium butyricum RepID=B1QXL7_CLOBU
Length = 634
Score = 63.5 bits (153), Expect = 1e-08
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 3/165 (1%)
Frame = +2
Query: 92 LRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEP 271
L +A+ + KA ++ + ++ G V+ G + + G L Q+S H
Sbjct: 460 LEKAKNEMETKAWESFNLNDVV-KGEVKRFTDFGAFVEINGVDGLLHLSQISWNHV---- 514
Query: 272 NKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKK---ASWSKYSKYVNLGDIFIGRVC 442
K I+++ K +G I+ VK+I +D+E++KL LS K+ W + I +G+V
Sbjct: 515 -KKIEDVLK--IGQIVDVKIIGLDKETKKLSLSMKELMAKPWDNVKEKYPEDSIVLGKVV 571
Query: 443 SVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ +GAFVEL + GL+HIS++S + ++D LT G+
Sbjct: 572 RLSKFGAFVELE-----PGVDGLVHISKISHERIEDPAQVLTIGQ 611
[205][TOP]
>UniRef100_A8YAJ6 Similar to tr|Q4C3R0|Q4C3R0_CROWT RNA binding S1 n=1
Tax=Microcystis aeruginosa PCC 7806 RepID=A8YAJ6_MICAE
Length = 293
Score = 63.5 bits (153), Expect = 1e-08
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Frame = +2
Query: 38 EFDTALLQRPSAPNSLD-TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYS 214
EFD + + A + +LRQ W+ +SG RV G+N GG+
Sbjct: 75 EFDFLITRGQDAEGQVTLSLRQLLLQKAWENVREISESGKSVQLRVTGVNKGGVTGEVEG 134
Query: 215 LMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSK 394
L GF+P L + ++G +L+ I +D+E+ KLVLS+++ + +
Sbjct: 135 LKGFIPRSHLIEKNDLDS-----------LIGQLLTATFIQIDQENNKLVLSQREIARAN 183
Query: 395 YSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVS 532
+ +G + G V ++ YG FV+ +TGL+H +V+
Sbjct: 184 AISQLAVGKLLSGTVVKLQPYGVFVDCG------GVTGLLHAKQVT 223
[206][TOP]
>UniRef100_A7AYN8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
29149 RepID=A7AYN8_RUMGN
Length = 231
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Frame = +2
Query: 110 SSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQE 289
++ W Y + I ++EGI +GG + L GF+P +LS + I++
Sbjct: 30 ANPWNRVLEYMEKKTILPVKIEGIVNGGAIAMVEGLRGFIPASKLSLSY--------IED 81
Query: 290 IAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSK-------YVNLGDIFIGRVCSV 448
+ +L + V+VIDVD+ +LVLS ++ K K + +G + G V ++
Sbjct: 82 LETYLLKDV-EVQVIDVDQAGNRLVLSARELLKEKERKEKEAQIASIPIGTVMSGTVETL 140
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++YGAFV+L L+GL+H+S++S V++ L G+
Sbjct: 141 QNYGAFVKLE-----NGLSGLVHVSQISQKRVKNPAAVLNVGD 178
[207][TOP]
>UniRef100_UPI0000166125 ribosomal protein S1 n=1 Tax=Thermotoga maritima MSB8
RepID=UPI0000166125
Length = 543
Score = 63.2 bits (152), Expect = 1e-08
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFY-SLMGFLPYPQLSPVHSCKEPNKPIQEIA 295
W+ G + +G V I+ G +R + G +P ++ ++ K ++E+
Sbjct: 262 WEKVEEKYPVGKVVSGEVTSIHPFGFFVRLEPGVEGLVPRSEVFWGNA----RKSLEEVV 317
Query: 296 KDMLGSILSVKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAF 466
+G ++ V+VI+VD+E+RKL LS +KA W N+ ++ G+V + GAF
Sbjct: 318 S--VGDLVEVEVINVDKENRKLTLSYRKAKGDPWENIEDRYNVNNVVTGKVTGIIKQGAF 375
Query: 467 VELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
VEL +G + G + +SE+SW + + + L GE
Sbjct: 376 VELE--EG---VEGFVPVSEISWKRIDEPGEILKIGE 407
[208][TOP]
>UniRef100_Q8YXX8 30S ribosomal protein S1 n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YXX8_ANASP
Length = 305
Score = 63.2 bits (152), Expect = 1e-08
Identities = 38/161 (23%), Positives = 77/161 (47%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
RQ + W+ K++ + +V G+N GG+ + SL GF+P L+
Sbjct: 103 RQLEINHIWEKLAQMKENSQPVDVKVTGVNKGGVTVDVQSLRGFIPRSHLTE-------- 154
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVED 454
++ + + G L+ ++VD ++KLVLS++ + S + +G + G++ ++
Sbjct: 155 ---RDNLEALKGHTLTAGFLEVDRNNKKLVLSQRLVTRSSNFNQLEIGQLVEGKITGIKP 211
Query: 455 YGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+G FV+L L+ L+HI +VS ++ + G+
Sbjct: 212 FGVFVDLN------GLSALLHIKQVSQKFIESLEKVFQPGQ 246
[209][TOP]
>UniRef100_Q3M6P9 SSU ribosomal protein S1P n=1 Tax=Anabaena variabilis ATCC 29413
RepID=Q3M6P9_ANAVT
Length = 302
Score = 63.2 bits (152), Expect = 1e-08
Identities = 38/161 (23%), Positives = 77/161 (47%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
RQ + W+ K++ + +V G+N GG+ + SL GF+P L+
Sbjct: 103 RQLEINHIWEKLAQMKENSQPVDVKVTGVNKGGVTVDVQSLRGFIPRSHLTE-------- 154
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVED 454
++ + + G L+ ++VD ++KLVLS++ + S + +G + G++ ++
Sbjct: 155 ---RDNLEALKGHTLTAGFLEVDRNNKKLVLSQRLVTRSSNFNQLEIGQLVEGKITGIKP 211
Query: 455 YGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+G FV+L L+ L+HI +VS ++ + G+
Sbjct: 212 FGVFVDLN------GLSALLHIKQVSQKFIESLEKVFQPGQ 246
[210][TOP]
>UniRef100_A7I0M8 30S ribosomal protein S1 n=1 Tax=Campylobacter hominis ATCC BAA-381
RepID=A7I0M8_CAMHC
Length = 557
Score = 63.2 bits (152), Expect = 1e-08
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Frame = +2
Query: 155 IYNGRVEGINSGGLLLRFYSLMGFLPYPQLS---PVHSCKEPNKPIQEIAKDMLGSILSV 325
+ G V+ I + G+ + + G + Y ++S PV+ PN +E G + V
Sbjct: 204 VIEGIVKKITTYGMFVDVGGVDGLVHYSEISYKGPVN----PNSLYKE------GDKVPV 253
Query: 326 KVIDVDEESRKLVLSEKKA---SWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLY 496
KVI+ D E R L LS K A W + + +GD V ++E YGAFV+L
Sbjct: 254 KVINYDNEKRHLSLSIKAALPDPWDEIKDNLEVGDTIQVTVSNIEPYGAFVDLG-----N 308
Query: 497 HLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ G +HISE+SWD +++ +DF+++G+
Sbjct: 309 DIEGFLHISEISWDKNIKNPKDFISEGQ 336
[211][TOP]
>UniRef100_A2RLX0 30S ribosomal protein S1 n=3 Tax=Lactococcus lactis
RepID=A2RLX0_LACLM
Length = 408
Score = 63.2 bits (152), Expect = 1e-08
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Frame = +2
Query: 122 KAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHS-CKEPNKPIQEIAK 298
K A A G I G V + + G + + G + +LS HS K P+ ++
Sbjct: 186 KEAFAQLQEGDIVEGTVSRVTNFGAFVDLGGIDGLVHVSELS--HSRIKRPSDAVKP--- 240
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFV 469
G +++VK++ +D E+ +L LS K W + + +G G V + D+GAFV
Sbjct: 241 ---GDVVNVKILKLDPEAGRLSLSLKATQPGPWEQVEEKAPVGSTVEGTVKRLTDFGAFV 297
Query: 470 ELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
EL +P + GL+H+S++SW+ V++ +D L G+
Sbjct: 298 EL-YPG----VEGLVHVSQISWERVENPKDVLKVGQ 328
[212][TOP]
>UniRef100_B9YN31 RNA binding S1 domain protein n=1 Tax='Nostoc azollae' 0708
RepID=B9YN31_ANAAZ
Length = 301
Score = 63.2 bits (152), Expect = 1e-08
Identities = 36/153 (23%), Positives = 72/153 (47%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W +++ RV G+N GG+ + SL GF+P LS ++ +
Sbjct: 111 WDTLTQMQENSQTIQARVTGVNKGGITVEVLSLRGFIPRSHLSE-----------RDNLE 159
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
+ G L+ ++V+ ++KL+LSE+ A+ S + +G + G + ++ +G FV+L
Sbjct: 160 ALKGQTLTAGFLEVNRNTKKLILSERLATRSSNFSLLEVGQLVEGTITGIKPFGVFVDLE 219
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
++ L+HI +VS ++ + G+
Sbjct: 220 ------GVSALLHIKQVSQKFIESLEKVFQIGQ 246
[213][TOP]
>UniRef100_B5D1Z0 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM
17135 RepID=B5D1Z0_9BACE
Length = 594
Score = 63.2 bits (152), Expect = 1e-08
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 7/165 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
++AR + W NA ++ I G ++ GG+++ + + FLP Q+
Sbjct: 109 KKARATRSWDRVNAALENEEIIKGYIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ +++E + +V+S K +A + K + G + G
Sbjct: 161 KPIRDYDV-FVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIISKLEKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLT 568
V ++ YG F++L D GLIHI+++SW V D R+ ++
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVSDPREVVS 258
Score = 57.8 bits (138), Expect = 6e-07
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS + P + ++ D L+
Sbjct: 212 EKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS----WGRVSDPREVVSLDQK---LN 264
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E +++ L K+ + W + +GD G+V + DYGAF+E+
Sbjct: 265 VVILDFDDEKKRIALGLKQLTPHPWDALDPNLKVGDHVKGKVVVMADYGAFIEI-----A 319
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 320 PGVEGLIHVSEMSWSQHLRSAQDFMKVGD 348
[214][TOP]
>UniRef100_B3JJP5 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM
17136 RepID=B3JJP5_9BACE
Length = 594
Score = 63.2 bits (152), Expect = 1e-08
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 7/165 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
++AR + W NA ++ I G ++ GG+++ + + FLP Q+
Sbjct: 109 KKARATRSWDRVNAALENEEIIKGYIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ +++E + +V+S K +A + K + G + G
Sbjct: 161 KPIRDYDV-FVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIIGKLEKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLT 568
V ++ YG F++L D GLIHI+++SW V D R+ ++
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVSDPREVVS 258
Score = 58.2 bits (139), Expect = 5e-07
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS + P + ++ D L+
Sbjct: 212 EKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS----WGRVSDPREVVSLDQK---LN 264
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E +++ L K+ + W + +GD G+V + DYGAF+E+
Sbjct: 265 VVILDFDDEKKRIALGLKQLTPHPWDSLDPNLKVGDHVKGKVVVMADYGAFIEI-----A 319
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 320 PGVEGLIHVSEMSWSQHLRSAQDFMKVGD 348
[215][TOP]
>UniRef100_A3ZDX7 30S ribosomal protein S1 n=1 Tax=Campylobacter jejuni subsp. jejuni
HB93-13 RepID=A3ZDX7_CAMJE
Length = 556
Score = 63.2 bits (152), Expect = 1e-08
Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
TL RR N + LI G V+ I + G+ + + G + Y ++S K
Sbjct: 184 TLDDERRKRKELINNVAQQEDLI-EGIVKKITTYGMFVDVGGVDGLVHYSEIS----YKG 238
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKA---SWSKYSKYVNLGDIFIGRV 439
P P + K+ G + VKVI D+E + L LS K A WS+ +++GD V
Sbjct: 239 PVNP-GTLYKE--GDKVPVKVIKYDKERKHLSLSIKAALPDPWSEIKDTLDIGDTIKVIV 295
Query: 440 CSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
++E YGAFV+L + G +HISE+SWD +++ +D++ KG+
Sbjct: 296 SNIEPYGAFVDLE-----NDIEGFLHISEISWDKNIKNPKDYINKGQ 337
Score = 55.1 bits (131), Expect = 4e-06
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Frame = +2
Query: 155 IYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVI 334
+ G + + S G ++ + G L S + K +K Q G + VK+I
Sbjct: 377 VVEGEITSVTSFGAFVKLGGIEGLLHNEDASWDRNDKCKDKFSQ-------GDKIKVKII 429
Query: 335 DVDEESRKLVLSEKKASWS---KYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLT 505
+DEE++K+ LS K+ S S +Y+K +GDI G + ++D+G FVEL ++
Sbjct: 430 KIDEENQKISLSTKELSSSPVQEYAKIHKVGDIVKGAIRDIKDFGVFVELS-----KNVD 484
Query: 506 GLIHISEVSWDLVQDVR 556
LIH ++S ++++++
Sbjct: 485 ALIHKEDISTSMLENLK 501
[216][TOP]
>UniRef100_A3U9D9 30S ribosomal protein S1 n=1 Tax=Croceibacter atlanticus HTCC2559
RepID=A3U9D9_9FLAO
Length = 619
Score = 63.2 bits (152), Expect = 1e-08
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+AR W+ N D G I NG V+ GG+++ + + FLP Q+
Sbjct: 144 RKARTIKAWERVNDAHDDGTIVNGFVKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 195
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ ++ E + +V+S K +A + K + G + G
Sbjct: 196 KPIRDY-DAYVGKTMEFKVVKINHEFKNVVVSHKALIEADIEEQKKEIIGQLEKGQVLEG 254
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLV 544
V ++ YG FV+L D GL+HI+++SW +
Sbjct: 255 TVKNITSYGVFVDLGGVD------GLVHITDLSWSRI 285
Score = 60.8 bits (146), Expect = 7e-08
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS PN+ ++ L L+
Sbjct: 247 EKGQVLEGTVKNITSYGVFVDLGGVDGLVHITDLS-WSRINHPNEIVE------LDQKLN 299
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D DE+ ++ L K+ S W + +GD G+V + DYGAF+E+ +G
Sbjct: 300 VVILDFDEDKTRIQLGLKQLSKHPWEALGDELKVGDTVKGKVVVIADYGAFIEV--AEG- 356
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 357 --VEGLIHVSEMSWSTHLRSAQDFVNVGD 383
[217][TOP]
>UniRef100_UPI000197AF0C hypothetical protein BACCOPRO_01205 n=1 Tax=Bacteroides coprophilus
DSM 18228 RepID=UPI000197AF0C
Length = 595
Score = 62.8 bits (151), Expect = 2e-08
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
++AR + W NA ++ I G ++ GG+++ + + FLP Q+
Sbjct: 109 KKARATRSWDRVNAALENEEIIKGYIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ +++E + +V+S K +A + K + G + G
Sbjct: 161 KPIRDYDV-FVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIIGKLEKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRD 559
V ++ YG F++L D GLIHI+++SW V D R+
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVSDPRE 255
Score = 59.7 bits (143), Expect = 2e-07
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS +P + +Q L L+
Sbjct: 212 EKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS-WGRVSDPREVVQ------LDQKLN 264
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E +++ L K+ + W + +GD G+V + DYGAF+E+
Sbjct: 265 VVILDFDDEKKRIALGLKQLTPHPWDALDPNLKVGDHVKGKVVVMADYGAFIEI-----A 319
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 320 PGVEGLIHVSEMSWSQHLRSAQDFMKVGD 348
[218][TOP]
>UniRef100_Q7V2F0 30S ribosomal protein S1 homolog B, putative Nbp1 n=1
Tax=Prochlorococcus marinus subsp. pastoris str.
CCMP1986 RepID=Q7V2F0_PROMP
Length = 405
Score = 62.8 bits (151), Expect = 2e-08
Identities = 44/153 (28%), Positives = 73/153 (47%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W+ + +G + + G N GGL L GF+P QL E + Q +
Sbjct: 211 WEKVASSAKNGELIQVTINGFNRGGLTCDVDGLRGFIPRSQL-------ENGQDYQSL-- 261
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELR 478
+ L V ++V+ E+RKLVLSEKKA + G + G V +++ YG FV+L
Sbjct: 262 --VSKNLKVAFLEVNPETRKLVLSEKKALLVSKFADLKFGQLIEGEVLAIKPYGFFVDLG 319
Query: 479 FPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+GL+H S ++ ++++R+ +GE
Sbjct: 320 ------GASGLLHQSSITNGSIRNLREIFREGE 346
[219][TOP]
>UniRef100_Q2JV37 Putative ribosomal protein S1 n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JV37_SYNJA
Length = 304
Score = 62.8 bits (151), Expect = 2e-08
Identities = 45/180 (25%), Positives = 83/180 (46%)
Frame = +2
Query: 38 EFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSL 217
E D +L+ S + + R+ R W+ + +G V G N GG+L+ L
Sbjct: 82 EADFLILREDSEGQIVLSARRLRLKRLWEELAEKQTNGQTVTALVIGTNKGGVLVDVQGL 141
Query: 218 MGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKY 397
GF+P L+ +E ++++G L+ +++V+ + KLVLS++ A ++
Sbjct: 142 RGFIPRSHLNQ-----------RENLEELVGQSLTASLLEVNPAANKLVLSQRVARQAES 190
Query: 398 SKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G + G+V +++ +G FVEL +GL+ I +VS V + D G+
Sbjct: 191 LGIYTTGQVVRGKVSALKPFGVFVELEEGG-----SGLLPIKQVSQSFVASLSDLFQPGQ 245
[220][TOP]
>UniRef100_B9K8E1 RNA binding S1 domain protein n=1 Tax=Thermotoga neapolitana DSM
4359 RepID=B9K8E1_THENN
Length = 539
Score = 62.8 bits (151), Expect = 2e-08
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 4/157 (2%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFY-SLMGFLPYPQLSPVHSCKEPNKPIQEIA 295
W G + +G V I+ G +R + G +P ++ +S K ++++
Sbjct: 259 WNKVEEKYPVGKVVSGEVTSIHPFGFFVRLEPGVEGLVPRSEVFWGNS----RKNLEDVV 314
Query: 296 KDMLGSILSVKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAF 466
K +G ++ V+VI+VD E+RKL LS +KA W ++G+ GRV S+ G F
Sbjct: 315 K--VGDLVKVEVINVDRENRKLTLSYRKAKGDPWENIEDRYHVGNTVAGRVISIIRQGVF 372
Query: 467 VELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
VEL +G + G + ISE+SW V + + GE
Sbjct: 373 VELE--EG---IEGFVPISELSWKRVDSPEEVVKVGE 404
[221][TOP]
>UniRef100_C9L210 Ribosomal protein S1 n=1 Tax=Bacteroides finegoldii DSM 17565
RepID=C9L210_9BACE
Length = 600
Score = 62.8 bits (151), Expect = 2e-08
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+AR + W NA ++ I G ++ GG+++ + + FLP Q+
Sbjct: 109 RKARATRSWDRVNAALENEEIIKGYIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ +++E + +V+S K +A + K + G + G
Sbjct: 161 KPIRDY-DVFVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIIGKLEKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRD 559
V ++ YG F++L D GLIHI+++SW V D ++
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVSDPKE 255
Score = 58.2 bits (139), Expect = 5e-07
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS +P + ++ L L+
Sbjct: 212 EKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS-WGRVSDPKEVVE------LDQKLN 264
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E +++ L K+ + W + +GD G+V + DYGAF+E+
Sbjct: 265 VVILDFDDEKKRIALGLKQLTPHPWDALDTDLKVGDKVKGKVVVMADYGAFIEI-----A 319
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 320 PGVEGLIHVSEMSWSQHLRSAQDFMKVGD 348
[222][TOP]
>UniRef100_C6I541 30S ribosomal protein S1 n=3 Tax=Bacteroides RepID=C6I541_9BACE
Length = 597
Score = 62.8 bits (151), Expect = 2e-08
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+AR + W NA ++ I G ++ GG+++ + + FLP Q+
Sbjct: 109 RKARATRSWDRVNAALENEEIIKGYIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ +++E + +V+S K +A + K + G + G
Sbjct: 161 KPIRDY-DVFVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIIGKLEKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRD 559
V ++ YG F++L D GLIHI+++SW V D ++
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVSDPKE 255
Score = 58.5 bits (140), Expect = 4e-07
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS +P + ++ L L+
Sbjct: 212 EKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS-WGRVSDPKEVVE------LDQKLN 264
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E +++ L K+ + W + +GD G+V + DYGAF+E+
Sbjct: 265 VVILDFDDEKKRIALGLKQLTPHPWDALDPNLQVGDKVKGKVVVMADYGAFIEI-----A 319
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 320 PGVEGLIHVSEMSWSQHLRSAQDFMKVGD 348
[223][TOP]
>UniRef100_C3QDU8 30S ribosomal protein S1 n=1 Tax=Bacteroides sp. D1
RepID=C3QDU8_9BACE
Length = 599
Score = 62.8 bits (151), Expect = 2e-08
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+AR + W NA ++ I G ++ GG+++ + + FLP Q+
Sbjct: 109 RKARATRSWDRVNAALENEEIIKGYIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ +++E + +V+S K +A + K + G + G
Sbjct: 161 KPIRDY-DVFVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIIGKLEKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRD 559
V ++ YG F++L D GLIHI+++SW V D ++
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVSDPKE 255
Score = 58.2 bits (139), Expect = 5e-07
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS +P + ++ L L+
Sbjct: 212 EKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS-WGRVSDPKEVVE------LDQKLN 264
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E +++ L K+ + W + +GD G+V + DYGAF+E+
Sbjct: 265 VVILDFDDEKKRIALGLKQLTPHPWDALDTDLKVGDKVKGKVVVMADYGAFIEI-----A 319
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 320 PGVEGLIHVSEMSWSQHLRSAQDFMKVGD 348
[224][TOP]
>UniRef100_B7AG21 Putative uncharacterized protein n=1 Tax=Bacteroides eggerthii DSM
20697 RepID=B7AG21_9BACE
Length = 597
Score = 62.8 bits (151), Expect = 2e-08
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+AR + W NA ++ I G ++ GG+++ + + FLP Q+
Sbjct: 109 RKARATRSWDRVNAALENEEIIKGYIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ +++E + +V+S K +A + K + G + G
Sbjct: 161 KPIRDY-DVFVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIIGKLEKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRD 559
V ++ YG F++L D GLIHI+++SW V D ++
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVSDPKE 255
Score = 58.5 bits (140), Expect = 4e-07
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS +P + ++ L L+
Sbjct: 212 EKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS-WGRVSDPKEVVE------LDQKLN 264
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E +++ L K+ + W + +GD G+V + DYGAF+E+
Sbjct: 265 VVILDFDDEKKRIALGLKQLTPHPWDALDPNLKVGDHVKGKVVVMADYGAFIEI-----A 319
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 320 PGVEGLIHVSEMSWSQHLRSAQDFMKVGD 348
[225][TOP]
>UniRef100_B3CEA7 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis
DSM 17393 RepID=B3CEA7_9BACE
Length = 598
Score = 62.8 bits (151), Expect = 2e-08
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+AR + W NA ++ I G ++ GG+++ + + FLP Q+
Sbjct: 109 RKARATRSWDRVNAALENEEIIKGYIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ +++E + +V+S K +A + K + G + G
Sbjct: 161 KPIRDY-DVFVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIIGKLEKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRD 559
V ++ YG F++L D GLIHI+++SW V D ++
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVSDPKE 255
Score = 60.1 bits (144), Expect = 1e-07
Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS +P + ++ L L+
Sbjct: 212 EKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS-WGRVSDPKEVVE------LDQKLN 264
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E +++ L K+ + W S + +GD G+V + DYGAF+E+
Sbjct: 265 VVILDFDDEKKRIALGLKQLTPHPWDALSAELKVGDKVKGKVVVMADYGAFIEI-----A 319
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 320 PGVEGLIHVSEMSWSQHLRSAQDFMKVGD 348
[226][TOP]
>UniRef100_B0NVI0 Putative uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC
43183 RepID=B0NVI0_BACSE
Length = 597
Score = 62.8 bits (151), Expect = 2e-08
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+AR + W NA ++ I G ++ GG+++ + + FLP Q+
Sbjct: 109 RKARATRSWDRVNAALENEEIIKGYIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ +++E + +V+S K +A + K + G + G
Sbjct: 161 KPIRDY-DVFVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIIGKLEKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRD 559
V ++ YG F++L D GLIHI+++SW V D ++
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVSDPKE 255
Score = 58.5 bits (140), Expect = 4e-07
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS +P + ++ L L+
Sbjct: 212 EKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS-WGRVSDPKEVVE------LDQKLN 264
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E +++ L K+ + W + +GD G+V + DYGAF+E+
Sbjct: 265 VVILDFDDEKKRIALGLKQLTPHPWDALDPNLKVGDHVKGKVVVMADYGAFIEI-----A 319
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 320 PGVEGLIHVSEMSWSQHLRSAQDFMKVGD 348
[227][TOP]
>UniRef100_A7VAT4 Putative uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC
8492 RepID=A7VAT4_BACUN
Length = 598
Score = 62.8 bits (151), Expect = 2e-08
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+AR + W NA ++ I G ++ GG+++ + + FLP Q+
Sbjct: 109 RKARATRSWDRVNAALENEEIIKGYIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ +++E + +V+S K +A + K + G + G
Sbjct: 161 KPIRDY-DVFVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIIGKLEKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRD 559
V ++ YG F++L D GLIHI+++SW V D ++
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVSDPKE 255
Score = 58.5 bits (140), Expect = 4e-07
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS +P + ++ L L+
Sbjct: 212 EKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS-WGRVSDPKEVVE------LDQKLN 264
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E +++ L K+ + W + +GD G+V + DYGAF+E+
Sbjct: 265 VVILDFDDEKKRIALGLKQLTPHPWDALDANLKVGDHVKGKVVVMADYGAFIEI-----A 319
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 320 PGVEGLIHVSEMSWSQHLRSAQDFMKVGD 348
[228][TOP]
>UniRef100_C3QSR7 30S ribosomal protein S1 n=2 Tax=Bacteroides RepID=C3QSR7_9BACE
Length = 600
Score = 62.8 bits (151), Expect = 2e-08
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+AR + W NA ++ I G ++ GG+++ + + FLP Q+
Sbjct: 109 RKARATRSWDRVNAALENEEIIKGYIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ +++E + +V+S K +A + K + G + G
Sbjct: 161 KPIRDY-DVFVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIIGKLEKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRD 559
V ++ YG F++L D GLIHI+++SW V D ++
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVSDPKE 255
Score = 58.2 bits (139), Expect = 5e-07
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS +P + ++ L L+
Sbjct: 212 EKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS-WGRVSDPKEVVE------LDQKLN 264
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E +++ L K+ + W + +GD G+V + DYGAF+E+
Sbjct: 265 VVILDFDDEKKRIALGLKQLTPHPWDALDTDLKVGDKVKGKVVVMADYGAFIEI-----A 319
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 320 PGVEGLIHVSEMSWSQHLRSAQDFMKVGD 348
[229][TOP]
>UniRef100_A5ZGD5 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC
43185 RepID=A5ZGD5_9BACE
Length = 598
Score = 62.8 bits (151), Expect = 2e-08
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+AR + W NA ++ I G ++ GG+++ + + FLP Q+
Sbjct: 109 RKARATRSWDRVNAALENEEIIKGYIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ +++E + +V+S K +A + K + G + G
Sbjct: 161 KPIRDY-DVFVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIIGKLEKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRD 559
V ++ YG F++L D GLIHI+++SW V D ++
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVSDPKE 255
Score = 58.5 bits (140), Expect = 4e-07
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS +P + ++ L L+
Sbjct: 212 EKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS-WGRVSDPKEVVE------LDQKLN 264
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E +++ L K+ + W + +GD G+V + DYGAF+E+
Sbjct: 265 VVILDFDDEKKRIALGLKQLTPHPWDALDPDLKVGDKVKGKVVVMADYGAFIEI-----A 319
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 320 AGVEGLIHVSEMSWSQHLRSAQDFMKVGD 348
[230][TOP]
>UniRef100_A2TT98 30S ribosomal protein S1 n=1 Tax=Dokdonia donghaensis MED134
RepID=A2TT98_9FLAO
Length = 610
Score = 62.8 bits (151), Expect = 2e-08
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+AR W NA D G I NG V+ GG+++ + + FLP Q+
Sbjct: 134 RKARVIKAWDRVNAAHDEGTIVNGFVKARTKGGMIVDVFGIEAFLPGSQIDV-------- 185
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ + + KV+ ++ E + +V+S K +A + K + G + G
Sbjct: 186 KPIRDY-DQYVNKTMEFKVVKINHEFKNVVVSHKALIEADIEEQKKEIIGQLEKGQVLEG 244
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLV 544
V ++ YG FV+L D GL+HI+++SW +
Sbjct: 245 VVKNITSYGVFVDLGGVD------GLVHITDLSWSRI 275
Score = 59.3 bits (142), Expect = 2e-07
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS PN+ ++ L L+
Sbjct: 237 EKGQVLEGVVKNITSYGVFVDLGGVDGLVHITDLS-WSRINHPNEIVE------LDQKLN 289
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D DE+ ++ L K+ S W + +GD G+V + DYGAF+E+ +G
Sbjct: 290 VVILDFDEDKTRIQLGLKQLSKHPWEALGDELKVGDNVKGKVVVIADYGAFIEVE--EG- 346
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 347 --VEGLIHVSEMSWSTHLRSAQDFVKVGD 373
[231][TOP]
>UniRef100_UPI000192EFD9 hypothetical protein PREVCOP_03040 n=1 Tax=Prevotella copri DSM
18205 RepID=UPI000192EFD9
Length = 594
Score = 62.4 bits (150), Expect = 2e-08
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
++AR S W+ NA ++ I G ++ GG+++ + + FLP Q+ VH
Sbjct: 108 KKARLSKSWERVNAALENEEIIQGYIKCRTKGGMIVDVFGIEAFLPGSQID-VH------ 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKY-------VNLGDIFIG 433
PI++ +G + KV+ +++E R +V+S K + + + G I G
Sbjct: 161 -PIRDY-DVFVGKTMEFKVVKINQEFRNVVVSHKALIEQELEQQRKEIIGKLEKGQILEG 218
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLT 568
V ++ YG FV+L D GLIHI+++SW V D + ++
Sbjct: 219 TVKNITTYGVFVDLGGVD------GLIHITDLSWGRVSDPHEVVS 257
Score = 58.5 bits (140), Expect = 4e-07
Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G I G V+ I + G+ + + G + LS +P++ + L ++
Sbjct: 211 EKGQILEGTVKNITTYGVFVDLGGVDGLIHITDLS-WGRVSDPHEVVS------LDQKIN 263
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D DEE +++ L K+ + W + + +GD G+V + DYGAFVE+
Sbjct: 264 VVILDFDEEKKRIALGLKQLTPHPWDALDENLKVGDHVKGKVVVMADYGAFVEI-----A 318
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 319 PGVEGLIHVSEMSWSQHLRSAQDFMKVGD 347
[232][TOP]
>UniRef100_Q89ZN2 30S ribosomal protein S1 n=1 Tax=Bacteroides thetaiotaomicron
RepID=Q89ZN2_BACTN
Length = 599
Score = 62.4 bits (150), Expect = 2e-08
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+AR + W NA ++ I G ++ GG+++ + + FLP Q+
Sbjct: 109 RKARATRSWDRVNAALENEEIIKGFIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ +++E + +V+S K +A + K + G + G
Sbjct: 161 KPIRDYDV-FVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIIGKLEKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRD 559
V ++ YG F++L D GLIHI+++SW V D ++
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVSDPKE 255
Score = 58.5 bits (140), Expect = 4e-07
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS +P + ++ L L+
Sbjct: 212 EKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS-WGRVSDPKEVVE------LDQKLN 264
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E +++ L K+ + W + +GD G+V + DYGAF+E+
Sbjct: 265 VVILDFDDEKKRIALGLKQLTPHPWDALDTDLKVGDKVKGKVVVMADYGAFIEI-----A 319
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 320 TGVEGLIHVSEMSWSQHLRSAQDFMKVGD 348
[233][TOP]
>UniRef100_C9ML89 Ribosomal protein S1 n=1 Tax=Prevotella veroralis F0319
RepID=C9ML89_9BACT
Length = 591
Score = 62.4 bits (150), Expect = 2e-08
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
++AR W+ N ++ + G ++ GG+++ + + FLP Q+ VH ++ +
Sbjct: 111 KKARLQKSWENINKALENDEVIQGYIKSRTKGGMIVDVFGIEAFLPGSQID-VHPIRDYD 169
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK-------KASWSKYSKYVNLGDIFIG 433
+G + KV+ +++E R +V+S K +A + ++ G I G
Sbjct: 170 V--------FVGKTMEFKVVKINQEFRNVVVSHKALIEAELEAQRKEIISHLEKGQILEG 221
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQD 550
V ++ YG FV+L D GL+HI+++SW V D
Sbjct: 222 TVKNITSYGVFVDLGGVD------GLVHITDLSWGRVSD 254
Score = 60.5 bits (145), Expect = 9e-08
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Frame = +2
Query: 92 LRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEP 271
L +A + K ++ + G I G V+ I S G+ + + G + LS
Sbjct: 197 LIEAELEAQRKEIISHLEKGQILEGTVKNITSYGVFVDLGGVDGLVHITDLS----WGRV 252
Query: 272 NKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVC 442
+ P + +A D ++V ++D DEE +++ L K+ + W + +GD G+V
Sbjct: 253 SDPHEVVALDQK---INVVILDFDEEKKRIALGLKQLTPHPWDSLDPNLKVGDHVKGKVV 309
Query: 443 SVEDYGAFVELRFPDGLYHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ DYGAFVE++ + GLIH+SE+SW ++ ++F+ G+
Sbjct: 310 VMADYGAFVEIQ-----PGVEGLIHVSEMSWSQHLRSAQEFMKVGD 350
[234][TOP]
>UniRef100_C6IKA2 30S ribosomal protein S1 n=1 Tax=Bacteroides sp. 1_1_6
RepID=C6IKA2_9BACE
Length = 599
Score = 62.4 bits (150), Expect = 2e-08
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
R+AR + W NA ++ I G ++ GG+++ + + FLP Q+
Sbjct: 109 RKARATRSWDRVNAALENEEIIKGFIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK---KASWSKYSKYV----NLGDIFIG 433
KPI++ +G + KV+ +++E + +V+S K +A + K + G + G
Sbjct: 161 KPIRDYDV-FVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIIGKLEKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRD 559
V ++ YG F++L D GLIHI+++SW V D ++
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVSDPKE 255
Score = 58.5 bits (140), Expect = 4e-07
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 DSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILS 322
+ G + G V+ I S G+ + + G + LS +P + ++ L L+
Sbjct: 212 EKGQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS-WGRVSDPKEVVE------LDQKLN 264
Query: 323 VKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGL 493
V ++D D+E +++ L K+ + W + +GD G+V + DYGAF+E+
Sbjct: 265 VVILDFDDEKKRIALGLKQLTPHPWDALDTDLKVGDKVKGKVVVMADYGAFIEI-----A 319
Query: 494 YHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DF+ G+
Sbjct: 320 TGVEGLIHVSEMSWSQHLRSAQDFMKVGD 348
[235][TOP]
>UniRef100_C5VIN8 Ribosomal protein S1 n=1 Tax=Prevotella melaninogenica ATCC 25845
RepID=C5VIN8_9BACT
Length = 594
Score = 62.4 bits (150), Expect = 2e-08
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
++AR W+ N ++ + G ++ GG+++ + + FLP Q+ VH ++ +
Sbjct: 111 KKARLQKSWENINKALENDEVIQGYIKSRTKGGMIVDVFGIEAFLPGSQID-VHPIRDYD 169
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK-------KASWSKYSKYVNLGDIFIG 433
+G + KV+ +++E R +V+S K +A + ++ G I G
Sbjct: 170 V--------FVGKTMEFKVVKINQEFRNVVVSHKALIEAELEAQRKEIISHLEKGQILEG 221
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQD 550
V ++ YG FV+L D GL+HI+++SW V D
Sbjct: 222 TVKNITSYGVFVDLGGVD------GLVHITDLSWGRVSD 254
Score = 60.5 bits (145), Expect = 9e-08
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Frame = +2
Query: 92 LRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEP 271
L +A + K ++ + G I G V+ I S G+ + + G + LS
Sbjct: 197 LIEAELEAQRKEIISHLEKGQILEGTVKNITSYGVFVDLGGVDGLVHITDLS----WGRV 252
Query: 272 NKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVC 442
+ P + +A D ++V ++D DEE +++ L K+ + W + +GD G+V
Sbjct: 253 SDPHEVVALDQK---INVVILDFDEEKKRIALGLKQLTQHPWDSLDPNLKVGDHVKGKVV 309
Query: 443 SVEDYGAFVELRFPDGLYHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ DYGAFVE++ + GLIH+SE+SW ++ ++F+ G+
Sbjct: 310 VMADYGAFVEIQ-----PGVEGLIHVSEMSWSQHLRSAQEFMKVGD 350
[236][TOP]
>UniRef100_A6EF45 30S ribosomal protein S1 n=1 Tax=Pedobacter sp. BAL39
RepID=A6EF45_9SPHI
Length = 644
Score = 62.4 bits (150), Expect = 2e-08
Identities = 46/194 (23%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Frame = +2
Query: 23 DTQIDEFDTALLQRPSAPNSLDTL--RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGL 196
D +I + ++ P N L ++A+ W++ N D+ I NG V+ GGL
Sbjct: 125 DLKIGDTVDVFVEAPEDANGQLILSRKRAKTQRSWESINEALDNDRIINGFVKSRTKGGL 184
Query: 197 LLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK 376
++ + FLP Q+ KPI++ +G + KV+ ++ E + +V+S K
Sbjct: 185 IVDIMGVEAFLPGSQID--------IKPIRDY-DVYVGKTMEFKVVKINHEFKNVVVSHK 235
Query: 377 -------KASWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSW 535
++ + + G + G V ++ D+G F++L D GL+HI+++SW
Sbjct: 236 ILIEDDLESQKVEIVSKLEKGQVLEGTVKNITDFGVFIDLGGVD------GLLHITDISW 289
Query: 536 DLVQDVRDFLTKGE 577
++ ++ L+ E
Sbjct: 290 GRIEHPKEVLSLDE 303
[237][TOP]
>UniRef100_A3YMD4 Ribosomal protein S1 n=3 Tax=Campylobacter jejuni
RepID=A3YMD4_CAMJE
Length = 556
Score = 62.4 bits (150), Expect = 2e-08
Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
TL RR N + LI G V+ I + G+ + + G + Y ++S K
Sbjct: 184 TLDDERRKRKELINNVAQQEDLI-EGIVKKITTYGMFVDVGGVDGLVHYSEIS----YKG 238
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKA---SWSKYSKYVNLGDIFIGRV 439
P P + K+ G + VKVI D+E + L LS K A WS+ +++GD V
Sbjct: 239 PVNP-GTLYKE--GDKVPVKVIKYDKERKHLSLSIKAALPDPWSEIKDTLDIGDTIKVIV 295
Query: 440 CSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
++E YGAFV+L + G +HISE+SWD +++ +D++ KG+
Sbjct: 296 SNIEPYGAFVDLG-----NDIEGFLHISEISWDKNIKNPKDYINKGQ 337
Score = 55.1 bits (131), Expect = 4e-06
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Frame = +2
Query: 155 IYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVI 334
+ G + + S G ++ + G L S + K +K Q G + VK+I
Sbjct: 377 VVEGEITSVTSFGAFVKLGGIEGLLHNEDASWDRNDKCKDKFSQ-------GDKIKVKII 429
Query: 335 DVDEESRKLVLSEKKASWS---KYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLT 505
+DEE++K+ LS K+ S S +Y+K +GDI G + ++D+G FVEL ++
Sbjct: 430 KIDEENQKISLSTKELSSSPVQEYAKIHKVGDIVKGAIRDIKDFGVFVELS-----KNVD 484
Query: 506 GLIHISEVSWDLVQDVR 556
LIH ++S ++++++
Sbjct: 485 ALIHKEDISTSMLENLK 501
[238][TOP]
>UniRef100_A1HTW2 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Thermosinus
carboxydivorans Nor1 RepID=A1HTW2_9FIRM
Length = 655
Score = 62.4 bits (150), Expect = 2e-08
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 7/160 (4%)
Frame = +2
Query: 119 WKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAK 298
W+ A + G+V + GGL + Y + GF+P Q++ H
Sbjct: 366 WEKLQAAAQANETVTGKVTAVVKGGLAVSLYGVRGFVPASQVAVQHVAD---------LT 416
Query: 299 DMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNL-------GDIFIGRVCSVEDY 457
+G L + I++D+ +K+VLS +K + + G I G V + D+
Sbjct: 417 PYVGQTLELLPIEIDQAKQKIVLSRRKVLEQEQQRRAEELFSRLAEGQIVTGTVSRIADF 476
Query: 458 GAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
G FV+L D GLIHIS++SW V++ + + G+
Sbjct: 477 GVFVDLGGVD------GLIHISDLSWHRVKNPTEVVNIGD 510
[239][TOP]
>UniRef100_Q1XDE2 30S ribosomal protein S1, chloroplastic n=1 Tax=Porphyra yezoensis
RepID=RR1_PORYE
Length = 263
Score = 62.4 bits (150), Expect = 2e-08
Identities = 36/148 (24%), Positives = 72/148 (48%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
++R+ WK + N ++G N GG+++ + GF+P L ++
Sbjct: 94 SIRRLEYIRAWKRIRQLLAEDSLLNVMIKGFNKGGMIINLEGISGFVPNSHLGNFQKSEQ 153
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKASWSKYSKYVNLGDIFIGRVCSV 448
N + +K+++V+E+S L+LS ++A S+ S + +G+I G + +
Sbjct: 154 FN-----------NKFIKLKLLNVEEKSNNLILSHRRALISQASSNLIVGNIIEGIINQI 202
Query: 449 EDYGAFVELRFPDGLYHLTGLIHISEVS 532
YG F+++ +L GL+HISE++
Sbjct: 203 TPYGLFIKVG------NLKGLVHISEIN 224
[240][TOP]
>UniRef100_Q5HUR5 Ribosomal protein S1 n=1 Tax=Campylobacter jejuni RM1221
RepID=Q5HUR5_CAMJR
Length = 556
Score = 62.0 bits (149), Expect = 3e-08
Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
TL RR N + LI G V+ I + G+ + + G + Y ++S K
Sbjct: 184 TLDDERRKRKELINNVAQQEDLI-EGIVKKITTYGMFVDVGGVDGLVHYSEIS----YKG 238
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKA---SWSKYSKYVNLGDIFIGRV 439
P P + K+ G + VKVI D+E + L LS K A WS+ +++GD V
Sbjct: 239 PVNP-GTLYKE--GDKVPVKVIKYDKERKHLSLSIKAALPDPWSEIKDTLDVGDTIKVIV 295
Query: 440 CSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
++E YGAFV+L + G +HISE+SWD +++ +D++ KG+
Sbjct: 296 SNIEPYGAFVDLG-----NDIEGFLHISEISWDKNIKNPKDYINKGQ 337
Score = 53.9 bits (128), Expect = 9e-06
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Frame = +2
Query: 155 IYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVI 334
+ G + + S G ++ + G L S + K +K Q G + VK+I
Sbjct: 377 VVEGEITSVTSFGAFVKLGGIEGLLHNEDASWDRNDKCKDKFSQ-------GDKIKVKII 429
Query: 335 DVDEESRKLVLSEKKASWS---KYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLT 505
+DEE++K+ LS K+ + S +Y+K +GDI G + ++D+G FVEL ++
Sbjct: 430 KIDEENQKISLSAKELNSSPVQEYAKIHKVGDIVKGTIRDIKDFGVFVELS-----KNVD 484
Query: 506 GLIHISEVSWDLVQDVR 556
LIH ++S ++++++
Sbjct: 485 ALIHKEDISTSMLENLK 501
[241][TOP]
>UniRef100_B8J7F8 RNA binding S1 domain protein n=1 Tax=Anaeromyxobacter dehalogenans
2CP-1 RepID=B8J7F8_ANAD2
Length = 535
Score = 62.0 bits (149), Expect = 3e-08
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Frame = +2
Query: 146 SGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSV 325
+GL G V+ +N GGL + + + F P Q+ V + A +G L
Sbjct: 238 TGLPVEGVVKAVNKGGLEVEVHGVRAFCPISQID-VRFVGD--------ASSFVGQKLLF 288
Query: 326 KVIDVDEE----SRKLVLSEKKASWSKYSKY-VNLGDIFIGRVCSVEDYGAFVELRFPDG 490
KV D SR+ +L E++A + ++ + G +F G V SV+DYGAFV++
Sbjct: 289 KVTRADARDAVLSRRALLEEERAHKAAETRARLAPGAVFDGVVTSVQDYGAFVDIG---- 344
Query: 491 LYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ GL+H+SE++WD V +D L+ G+
Sbjct: 345 --GVEGLVHVSELAWDRVSKPQDLLSAGD 371
[242][TOP]
>UniRef100_B4UDY4 RNA binding S1 domain protein n=1 Tax=Anaeromyxobacter sp. K
RepID=B4UDY4_ANASK
Length = 537
Score = 62.0 bits (149), Expect = 3e-08
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Frame = +2
Query: 146 SGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSV 325
+GL G V+ +N GGL + + + F P Q+ V + A +G L
Sbjct: 240 TGLPVEGVVKAVNKGGLEVEVHGVRAFCPISQID-VRFVGD--------ASSFVGQKLLF 290
Query: 326 KVIDVDEE----SRKLVLSEKKASWSKYSKY-VNLGDIFIGRVCSVEDYGAFVELRFPDG 490
KV D SR+ +L E++A + ++ + G +F G V SV+DYGAFV++
Sbjct: 291 KVTRADARDAVLSRRALLEEERAHKAAETRARLAPGAVFDGVVTSVQDYGAFVDIG---- 346
Query: 491 LYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
+ GL+H+SE++WD V +D L+ G+
Sbjct: 347 --GVEGLVHVSELAWDRVSKPQDLLSAGD 373
[243][TOP]
>UniRef100_A8FLU2 30S ribosomal protein S1 n=1 Tax=Campylobacter jejuni subsp. jejuni
81116 RepID=A8FLU2_CAMJ8
Length = 556
Score = 62.0 bits (149), Expect = 3e-08
Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Frame = +2
Query: 89 TLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKE 268
TL RR N + LI G V+ I + G+ + + G + Y ++S K
Sbjct: 184 TLDDERRKRKELINNVAQQEDLI-EGIVKKITTYGMFVDVGGVDGLVHYSEIS----YKG 238
Query: 269 PNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKA---SWSKYSKYVNLGDIFIGRV 439
P P + K+ G + VKVI D+E + L LS K A WS+ +++GD V
Sbjct: 239 PVNP-GTLYKE--GDKVPVKVIKYDKERKHLSLSIKAALPDPWSEIKDTLDVGDTIKVIV 295
Query: 440 CSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDL-VQDVRDFLTKGE 577
++E YGAFV+L + G +HISE+SWD +++ +D++ KG+
Sbjct: 296 SNIEPYGAFVDLG-----NDIEGFLHISEISWDKNIKNPKDYINKGQ 337
Score = 55.1 bits (131), Expect = 4e-06
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Frame = +2
Query: 155 IYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVI 334
+ G + + S G ++ + G L S + K +K Q G + VK+I
Sbjct: 377 VVEGEITSVTSFGAFVKLGGIEGLLHNEDASWDRNDKCKDKFSQ-------GDKIKVKII 429
Query: 335 DVDEESRKLVLSEKKASWS---KYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLT 505
+DEE++K+ LS K+ S S +Y+K +GDI G + ++D+G FVEL ++
Sbjct: 430 KIDEENQKISLSTKELSSSPVQEYAKIHKVGDIVKGAIRDIKDFGVFVELS-----KNVD 484
Query: 506 GLIHISEVSWDLVQDVR 556
LIH ++S ++++++
Sbjct: 485 ALIHKEDISTSMLENLK 501
[244][TOP]
>UniRef100_Q3DQC8 30S ribosomal protein S1 n=4 Tax=Streptococcus agalactiae
RepID=Q3DQC8_STRAG
Length = 466
Score = 62.0 bits (149), Expect = 3e-08
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Frame = +2
Query: 38 EFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDS------GLIYNGRVEGINSGGLL 199
EFD + + +A N R R + AA A K+ G + G+V + S G
Sbjct: 219 EFDAKIKEVDAAENRFILSR--REVVEESAAAARKEVFSNIEVGSVVTGKVARLTSFGAF 276
Query: 200 LRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKK 379
+ + G + +LS H K + + +++ VKV+ +DEE+ ++ LS K
Sbjct: 277 IDLGGVDGLVHVTELS--HERNVSPKSVVTVGEEV-----EVKVLSIDEEAGRVSLSLKA 329
Query: 380 AS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQD 550
+ W + + GD+ G+V + D+GAFVE+ L + GL+HIS++S V++
Sbjct: 330 TTPGPWDGVEQKLAAGDVIEGKVKRLTDFGAFVEV-----LPGIDGLVHISQISHKRVEN 384
Query: 551 VRDFLTKGE 577
+D L+ G+
Sbjct: 385 PKDVLSAGQ 393
[245][TOP]
>UniRef100_Q3DIK4 Ribosomal protein S1 (Fragment) n=1 Tax=Streptococcus agalactiae
515 RepID=Q3DIK4_STRAG
Length = 339
Score = 62.0 bits (149), Expect = 3e-08
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Frame = +2
Query: 38 EFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDS------GLIYNGRVEGINSGGLL 199
EFD + + +A N R R + AA A K+ G + G+V + S G
Sbjct: 92 EFDAKIKEVDAAENRFILSR--REVVEESAAAARKEVFSNIEVGSVVTGKVARLTSFGAF 149
Query: 200 LRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKK 379
+ + G + +LS H K + + +++ VKV+ +DEE+ ++ LS K
Sbjct: 150 IDLGGVDGLVHVTELS--HERNVSPKSVVTVGEEV-----EVKVLSIDEEAGRVSLSLKA 202
Query: 380 AS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQD 550
+ W + + GD+ G+V + D+GAFVE+ L + GL+HIS++S V++
Sbjct: 203 TTPGPWDGVEQKLAAGDVIEGKVKRLTDFGAFVEV-----LPGIDGLVHISQISHKRVEN 257
Query: 551 VRDFLTKGE 577
+D L+ G+
Sbjct: 258 PKDVLSAGQ 266
[246][TOP]
>UniRef100_Q3DBV7 Ribosomal protein S1 (Fragment) n=1 Tax=Streptococcus agalactiae
CJB111 RepID=Q3DBV7_STRAG
Length = 332
Score = 62.0 bits (149), Expect = 3e-08
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Frame = +2
Query: 38 EFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDS------GLIYNGRVEGINSGGLL 199
EFD + + +A N R R + AA A K+ G + G+V + S G
Sbjct: 85 EFDAKIKEVDAAENRFILSR--REVVEESAAAARKEVFSNIEVGSVVTGKVARLTSFGAF 142
Query: 200 LRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKK 379
+ + G + +LS H K + + +++ VKV+ +DEE+ ++ LS K
Sbjct: 143 IDLGGVDGLVHVTELS--HERNVSPKSVVTVGEEV-----EVKVLSIDEEAGRVSLSLKA 195
Query: 380 AS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQD 550
+ W + + GD+ G+V + D+GAFVE+ L + GL+HIS++S V++
Sbjct: 196 TTPGPWDGVEQKLAAGDVIEGKVKRLTDFGAFVEV-----LPGIDGLVHISQISHKRVEN 250
Query: 551 VRDFLTKGE 577
+D L+ G+
Sbjct: 251 PKDVLSAGQ 259
[247][TOP]
>UniRef100_Q3CZY2 Ribosomal protein S1 n=1 Tax=Streptococcus agalactiae H36B
RepID=Q3CZY2_STRAG
Length = 358
Score = 62.0 bits (149), Expect = 3e-08
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Frame = +2
Query: 38 EFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDS------GLIYNGRVEGINSGGLL 199
EFD + + +A N R R + AA A K+ G + G+V + S G
Sbjct: 109 EFDAKIKEVDAAENRFILSR--REVVEESAAAARKEVFSNIEVGSVVTGKVARLTSFGAF 166
Query: 200 LRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKK 379
+ + G + +LS H K + + +++ VKV+ +DEE+ ++ LS K
Sbjct: 167 IDLGGVDGLVHVTELS--HERNVSPKSVVTVGEEV-----EVKVLSIDEEAGRVSLSLKA 219
Query: 380 AS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQD 550
+ W + + GD+ G+V + D+GAFVE+ L + GL+HIS++S V++
Sbjct: 220 TTPGPWDGVEQKLAAGDVIEGKVKRLTDFGAFVEV-----LPGIDGLVHISQISHKRVEN 274
Query: 551 VRDFLTKGE 577
+D L+ G+
Sbjct: 275 PKDVLSAGQ 283
[248][TOP]
>UniRef100_C9LGR7 Ribosomal protein S1 n=1 Tax=Prevotella tannerae ATCC 51259
RepID=C9LGR7_9BACT
Length = 590
Score = 62.0 bits (149), Expect = 3e-08
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
Frame = +2
Query: 149 GLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVK 328
G + G V+ I S G+ + + G + LS +P++ +Q L L+V
Sbjct: 214 GQVLEGTVKNITSYGVFIDLGGVDGLIHITDLS-WGRVNDPHEVVQ------LDQKLNVV 266
Query: 329 VIDVDEESRKLVLSEKKAS---WSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYH 499
++D DEE +++ L K+ + W + + +GD G+V + DYGAFVE+
Sbjct: 267 ILDFDEEKKRIALGLKQLTPHPWDALAPELKVGDKVQGKVVVMADYGAFVEI-----APG 321
Query: 500 LTGLIHISEVSWDL-VQDVRDFLTKGE 577
+ GLIH+SE+SW ++ +DFL G+
Sbjct: 322 VEGLIHVSEMSWSQHLRSAQDFLKVGD 348
Score = 54.3 bits (129), Expect = 7e-06
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
++AR S W N G ++ GG+++ + + FLP Q+
Sbjct: 109 KKARLSKAWDRINQALQDKETIKGFIKCRTKGGMIVDVFGIEAFLPGSQIDV-------- 160
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK-------KASWSKYSKYVNLGDIFIG 433
KPI++ +G + +V+ +++E + +V+S K +A + + G + G
Sbjct: 161 KPIRDY-DIFVGKTMEFQVVKINQEYKNVVVSHKALIEAELEAQKQEIISKLQKGQVLEG 219
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQD 550
V ++ YG F++L D GLIHI+++SW V D
Sbjct: 220 TVKNITSYGVFIDLGGVD------GLIHITDLSWGRVND 252
[249][TOP]
>UniRef100_C7RAM6 Ribosomal protein S1 n=1 Tax=Kangiella koreensis DSM 16069
RepID=C7RAM6_KANKD
Length = 555
Score = 62.0 bits (149), Expect = 3e-08
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 6/182 (3%)
Frame = +2
Query: 35 DEFDTALLQRPSAPNSLDTLRQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYS 214
DE D +L+ N + + S W N G GRV + G +
Sbjct: 239 DEIDVKVLKFDRERNRVSLGIKQLGSDPWVDINDRYPEGARLQGRVTNLTDYGCFVEIED 298
Query: 215 -LMGFLPYPQLSPVHSCKEPNKPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEKKA--- 382
+ G + ++ + P+K + LG + V V+D+DEE R++ L K+
Sbjct: 299 GVEGLVHVSEMDWTNKNIHPSKVVN------LGDEVEVMVLDIDEERRRISLGIKQCVPN 352
Query: 383 SWSKYSKYVNLGDIFIGRVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLV--QDVR 556
W++++ N GD G + S+ D+G F+ L DG + GL+H+S++SW + + VR
Sbjct: 353 PWNEFAATHNKGDKVSGSIKSITDFGIFIGL---DG--GIDGLVHLSDISWTVAGEEAVR 407
Query: 557 DF 562
D+
Sbjct: 408 DY 409
[250][TOP]
>UniRef100_C6XS49 RNA binding S1 domain protein n=1 Tax=Pedobacter heparinus DSM 2366
RepID=C6XS49_PEDHD
Length = 644
Score = 62.0 bits (149), Expect = 3e-08
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Frame = +2
Query: 95 RQARRSSDWKAANAYKDSGLIYNGRVEGINSGGLLLRFYSLMGFLPYPQLSPVHSCKEPN 274
++A+ W++ N D+ I NG V+ GGL++ + FLP Q+
Sbjct: 151 KRAKTQRSWESINEALDNDRIINGFVKSRTKGGLIVDIMGVEAFLPGSQID--------I 202
Query: 275 KPIQEIAKDMLGSILSVKVIDVDEESRKLVLSEK-------KASWSKYSKYVNLGDIFIG 433
KPI++ +G + KV+ ++ E + +V+S K ++ + + G + G
Sbjct: 203 KPIRDY-DVYVGKTMEFKVVKINHEFKNVVVSHKILIEDDLESQKVEIVSKLEKGQVLEG 261
Query: 434 RVCSVEDYGAFVELRFPDGLYHLTGLIHISEVSWDLVQDVRDFLTKGE 577
V ++ D+G F++L D GL+HI+++SW ++ ++ L+ E
Sbjct: 262 TVKNITDFGVFIDLGGVD------GLLHITDISWGRIEHPKEVLSLDE 303