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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
virus China/Mar2007 RepID=A8W7G1_9VIRU
Length = 723
Score = 375 bits (962), Expect = e-102
Identities = 178/192 (92%), Positives = 184/192 (95%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
LFTRNHISKR G LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSN
Sbjct: 311 LFTRNHISKRSGTLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNH 370
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
YI+++AR YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD
Sbjct: 371 YIDRLARPYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 430
Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIID 540
EHKLY RMDNLL+FLHTWYNNMTFLLPDGYAYRRT CGVPSGLYNTQYLDSFGNLFLIID
Sbjct: 431 EHKLYSRMDNLLYFLHTWYNNMTFLLPDGYAYRRTHCGVPSGLYNTQYLDSFGNLFLIID 490
Query: 541 AMLEFGFTNSEI 576
AM+EF FT+ EI
Sbjct: 491 AMIEFEFTDDEI 502
[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
partitivirus 1-W8 RepID=Q50LH7_9VIRU
Length = 709
Score = 302 bits (773), Expect = 1e-80
Identities = 142/196 (72%), Positives = 162/196 (82%), Gaps = 4/196 (2%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKP----SCCIMYGLETIR 168
LFTRNHIS RDG LK RPVYAVDD FI+ ELM++FPL + AR P CIMY ETIR
Sbjct: 296 LFTRNHISDRDGFLKQRPVYAVDDFFILCELMISFPLHVMARYPINGIKSCIMYSFETIR 355
Query: 169 GSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY 348
GSNRY++ IARD+ +FF++DWSS+DQR+PRVITDI++TDFLR LIVINHGYQPTYEYP Y
Sbjct: 356 GSNRYLDSIARDFISFFTIDWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQPTYEYPAY 415
Query: 349 PDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLF 528
PDL EH LY RM+NLLHFLHTWYNNM F+ DG+AY R+ GVPSGL NTQYLDSF NLF
Sbjct: 416 PDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGFAYLRSAAGVPSGLLNTQYLDSFCNLF 475
Query: 529 LIIDAMLEFGFTNSEI 576
LIID + EFGFT +EI
Sbjct: 476 LIIDGLFEFGFTQAEI 491
[3][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-1 RepID=Q6BE43_9VIRU
Length = 706
Score = 291 bits (745), Expect = 3e-77
Identities = 133/192 (69%), Positives = 157/192 (81%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
LFTRNHIS RDG LK RPVYAVDD+F+I+E+MLTFPL + AR P CCIMYGLETIRGSN
Sbjct: 296 LFTRNHISDRDGNLKQRPVYAVDDLFLILEVMLTFPLLVMARLPECCIMYGLETIRGSNH 355
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
+I+ A+ + ++F++DWS YDQRLPR ITD+YYTDFL SLI+IN GYQPT +Y YPDL
Sbjct: 356 WIDSTAKRFRSYFTIDWSQYDQRLPRCITDLYYTDFLESLIIINFGYQPTADYADYPDLT 415
Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIID 540
++ RM NLLHFLHTWYNNM ++ DG+AY R CGVPSGL+NTQYLDSFGNL+LIID
Sbjct: 416 PDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGVPSGLFNTQYLDSFGNLYLIID 475
Query: 541 AMLEFGFTNSEI 576
MLEFG + EI
Sbjct: 476 GMLEFGISIDEI 487
[4][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
RepID=Q5GHF1_9VIRU
Length = 706
Score = 289 bits (739), Expect = 1e-76
Identities = 130/192 (67%), Positives = 160/192 (83%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
LFTRNHIS RDG LK RPVYA+DD+FI +E M+TFPL + ARK CCIMYG ETIRGSNR
Sbjct: 295 LFTRNHISDRDGNLKQRPVYAMDDLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNR 354
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
I++IA + +FF++DWS +DQRLPRVITDI+++DFL +IVI+HGYQPTY+YP+YPDL
Sbjct: 355 QIDKIASSFRSFFTIDWSGFDQRLPRVITDIFWSDFLERMIVISHGYQPTYDYPSYPDLT 414
Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIID 540
K++ RMDN+L FLHTWYNN+ F+ DG+AY RTC GVPSGL NTQYLDSF NLFLI D
Sbjct: 415 PDKMFQRMDNILFFLHTWYNNLVFVTADGFAYIRTCAGVPSGLLNTQYLDSFSNLFLIFD 474
Query: 541 AMLEFGFTNSEI 576
++EFG +++EI
Sbjct: 475 GLIEFGCSDAEI 486
[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=D0EIN9_9VIRU
Length = 502
Score = 283 bits (723), Expect = 9e-75
Identities = 126/192 (65%), Positives = 159/192 (82%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
LFTRNHIS RDG LK RPVYA+DD+FI +E +TFPL + ARK CCIMYG ETIRGSNR
Sbjct: 295 LFTRNHISDRDGNLKQRPVYAMDDLFIRLESKITFPLHVMARKIECCIMYGYETIRGSNR 354
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
I+++A +Y ++F++DWS +DQRLPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL
Sbjct: 355 QIDKLASNYKSYFTIDWSGFDQRLPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLT 414
Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIID 540
K++ RM N+L FLHTWYNN+ ++ DG+AY RTC GVPSGL NTQYLDSF NLFLI D
Sbjct: 415 PDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFLIFD 474
Query: 541 AMLEFGFTNSEI 576
++EFG +++EI
Sbjct: 475 GLIEFGCSDAEI 486
[6][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
RepID=Q9YX75_9VIRU
Length = 673
Score = 266 bits (681), Expect = 7e-70
Identities = 120/193 (62%), Positives = 155/193 (80%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
LFTRNHIS RDG LK RPVYAVDD+F+ IE MLTFP + ARKP CCIMYGLETIRGSN+
Sbjct: 292 LFTRNHISDRDGILKQRPVYAVDDLFLTIESMLTFPAHVIARKPECCIMYGLETIRGSNQ 351
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
+++IA DY +FF++DWS +DQRLP VI +++T+++ L+V+NHGY PTYEYP+YPDL
Sbjct: 352 ILDKIASDYKSFFTIDWSGFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYEYPSYPDLT 411
Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIID 540
+ + R+ NL+ FL TWY NM F+ DG++Y R GVPSG+ NTQ+LDSFGNLFL+ID
Sbjct: 412 TNDMVSRLTNLITFLATWYFNMVFVTADGFSYVREHAGVPSGMLNTQFLDSFGNLFLLID 471
Query: 541 AMLEFGFTNSEIE 579
++EFG T++EI+
Sbjct: 472 GLIEFGSTDAEID 484
[7][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=B2L075_9VIRU
Length = 185
Score = 249 bits (635), Expect = 1e-64
Identities = 109/169 (64%), Positives = 140/169 (82%)
Frame = +1
Query: 70 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 249
D+FI +E M+TFPL + ARK CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1 DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60
Query: 250 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 429
LPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWYNN+
Sbjct: 61 LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120
Query: 430 FLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 576
++ DG+AY RTC GVPSGL NTQYLDSF NLFLI D ++EFG +++EI
Sbjct: 121 YVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEI 169
[8][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
virus 717 RepID=Q9Q9X2_9VIRU
Length = 730
Score = 232 bits (591), Expect = 2e-59
Identities = 110/193 (56%), Positives = 145/193 (75%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
+FTRNHISKRDG LKVRPVYAVD++F+ +E ML FP T+QARKP CCIMYGLETIRGSN
Sbjct: 323 MFTRNHISKRDGTLKVRPVYAVDELFLDLECMLAFPATVQARKPECCIMYGLETIRGSNI 382
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
++ +A+ + +F ++DWS YDQRLP I ++ +L SL++I+HGY PT EY ++
Sbjct: 383 KLDSLAQGFISFATIDWSGYDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSEYED-TSMN 441
Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIID 540
++ R NL++F TWY NM FL DG+A+RR GVPSG+ TQ+LDSFGNL+LIID
Sbjct: 442 ISDMFTRFFNLINFTATWYFNMVFLSADGFAFRRQFAGVPSGMLLTQFLDSFGNLYLIID 501
Query: 541 AMLEFGFTNSEIE 579
++LEFG T +I+
Sbjct: 502 SLLEFGCTYDDIK 514
[9][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
hypoxylon virus RepID=Q85055_AHV
Length = 665
Score = 177 bits (448), Expect = 7e-43
Identities = 94/216 (43%), Positives = 131/216 (60%), Gaps = 23/216 (10%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
L R+HISKRD LKVRPVY I+I IE ML +PL QARK CCIMYGLETIRG
Sbjct: 257 LLVRSHISKRDN-LKVRPVYNAPMIYIRIECMLFYPLLAQARKRDCCIMYGLETIRGGMN 315
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQP----------- 327
+E+I+ +++F +DWS +D P I++ ++ +L + I+I+HGY
Sbjct: 316 ELERISNAFNSFLLIDWSRFDHLAPFTISNFFFKKWLPTKILIDHGYAQISNYHDHVHSF 375
Query: 328 ------------TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCC 471
+ EY T P+ ++ NL+ FL WY +M F+ PDG+AYRRT
Sbjct: 376 SAQAQSHGIPMISKEYQTPPEAT--VFAKKVLNLISFLERWYRDMVFVTPDGFAYRRTHA 433
Query: 472 GVPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 579
GVPSG+ TQ++DSF NL +++D ++EFGFT+ EI+
Sbjct: 434 GVPSGILMTQFIDSFVNLTILLDGLIEFGFTDEEIK 469
[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
1 RepID=Q5DM90_9VIRU
Length = 663
Score = 167 bits (424), Expect = 4e-40
Identities = 89/213 (41%), Positives = 127/213 (59%), Gaps = 21/213 (9%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGLETIRG
Sbjct: 261 LLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMM 319
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY---- 348
IE +A +S F +DWS +DQ +P + D++Y D++ +LI+++ GY + Y +
Sbjct: 320 EIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSF 379
Query: 349 ------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGV 477
+L+E ++++NLL F++TW+ M ++ PDG+AYRRT GV
Sbjct: 380 AAQARKLGVHGNSNLNEAPPETAIFANKVENLLKFINTWFKEMVYITPDGFAYRRTFAGV 439
Query: 478 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 576
PSG+ TQ +DSF NL ++ID++ EFGF S+I
Sbjct: 440 PSGILCTQLIDSFVNLVVLIDSLFEFGFHESDI 472
[11][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6EM35_9VIRU
Length = 663
Score = 167 bits (422), Expect = 7e-40
Identities = 89/214 (41%), Positives = 127/214 (59%), Gaps = 21/214 (9%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYG ETIRG
Sbjct: 261 LLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGFETIRGGMM 319
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY---- 348
IE +A +S F +DWS +DQ +P + D++Y D++ +LI+I+ GY + Y +
Sbjct: 320 EIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHNYNDHVHSF 379
Query: 349 ------------PDLDE-----HKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGV 477
+L+E ++++NLL F++TW+ M ++ PDG+AYRRT GV
Sbjct: 380 AAQARKLGVHGNSNLNEAPPEASVFANKVENLLKFINTWFKEMVYITPDGFAYRRTFAGV 439
Query: 478 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 579
PSG+ TQ +DSF NL ++ID++ EFGF S+I+
Sbjct: 440 PSGILCTQLIDSFVNLVVLIDSLFEFGFHESDIK 473
[12][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6X9T6_9VIRU
Length = 663
Score = 166 bits (419), Expect = 2e-39
Identities = 88/214 (41%), Positives = 127/214 (59%), Gaps = 21/214 (9%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGLETIRG
Sbjct: 261 LLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMM 319
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY---- 348
IE +A +S F +DWS +DQ +P + D++Y D++ +LI+++ GY + Y +
Sbjct: 320 EIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSF 379
Query: 349 ------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGV 477
+L+E ++++NLL F++TW+ M ++ PDG+AY RT GV
Sbjct: 380 AAQARKLGVHGDSNLNEAPPEAAVFANKVENLLKFINTWFKEMVYITPDGFAYSRTFAGV 439
Query: 478 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 579
PSG+ TQ +DSF NL ++ID++ EFGF S+I+
Sbjct: 440 PSGILCTQLIDSFVNLVVLIDSLFEFGFHESDIK 473
[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
annosum P-type partitivirus RepID=Q8QY51_9VIRU
Length = 734
Score = 141 bits (355), Expect = 4e-32
Identities = 82/224 (36%), Positives = 118/224 (52%), Gaps = 31/224 (13%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
++ R+ ISK LKVRPVY +F+++E MLT L Q RKP CI++ ETIRG
Sbjct: 284 MYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRGGMH 342
Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT--YEYPTYPD 354
+ +I+ +++ F D+S +DQ P I ++ F+ +I ++ GYQ + Y Y
Sbjct: 343 ELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQYA- 401
Query: 355 LDEHKLYHRMD-----------------------------NLLHFLHTWYNNMTFLLPDG 447
D K Y +D N+L F+ WY M F+ PDG
Sbjct: 402 YDFEKKYDNLDKSEPKFQEFAKKSNNLFPKHVVAFSFVIFNILSFIWWWYVFMVFITPDG 461
Query: 448 YAYRRTCCGVPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 579
Y Y R GVPSG++ TQ LDSF NLF+ +DA+LEFGF+ +I+
Sbjct: 462 YGYVRLLAGVPSGIFMTQILDSFVNLFIFVDALLEFGFSIDQIK 505
[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
Length = 576
Score = 97.8 bits (242), Expect = 5e-19
Identities = 59/192 (30%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Frame = +1
Query: 4 FTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLETIRGSN 177
F R H+ + D P KVR V+ ++ ELM +PL + AR P +++G ET+ G
Sbjct: 207 FARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYETLTGGW 266
Query: 178 RYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT 345
+ A D YST +LDWS +D+ + + +R + GY PT YP
Sbjct: 267 SRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPTISYPN 326
Query: 346 YPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNL 525
PD + R++NL +++ + +LPDG + G+ SG + TQ LDS N
Sbjct: 327 APDTNP----DRLENLWNWMTDAILTVPLMLPDGQLLQFNHSGIYSGYFQTQILDSIYNC 382
Query: 526 FLIIDAMLEFGF 561
+I + GF
Sbjct: 383 VMIYTILSRMGF 394
[15][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
RepID=B2CGP3_9VIRU
Length = 616
Score = 84.0 bits (206), Expect = 8e-15
Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLETIRGS 174
L T+ I K+D P K+R ++ +II E ML + + PS +++G ET G
Sbjct: 234 LHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYETFTGG 293
Query: 175 NRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTY 333
++ RD +F +LDWS +D+R ++ I YT R+ + + GY PT+
Sbjct: 294 ---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGYVPTH 348
Query: 334 EYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGVPSGLYNTQYL 507
PT+P D K R++ L +L T N +LPDG YRR G+PSGL+ TQ L
Sbjct: 349 SAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLL 405
Query: 508 DSFGNLFLIIDAMLEFGF 561
DS+ N ++ + GF
Sbjct: 406 DSWYNYTMLATLLSALGF 423
[16][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
cryptic virus 1 RepID=D0EP81_9VIRU
Length = 559
Score = 83.2 bits (204), Expect = 1e-14
Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLETIRGS 174
L T+ I K+D P K+R ++ +II E ML + + PS +++G ET G
Sbjct: 178 LHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYETFTGG 237
Query: 175 NRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTY 333
++ RD +F +LDWS +D+R ++ I YT R+ + + GY PT+
Sbjct: 238 ---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGYVPTH 292
Query: 334 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDS 513
PT+P D K L L + +LPDG YRR G+PSGL+ TQ LDS
Sbjct: 293 SAPTHPQWDHTKAIRHERLWLWTLENLFE-APIILPDGRMYRRHFAGIPSGLFITQSLDS 351
Query: 514 FGNLFLIIDAMLEFGF 561
+ N ++ + GF
Sbjct: 352 WYNYTMLATLLSALGF 367
[17][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=Q4KUU4_9VIRU
Length = 616
Score = 82.8 bits (203), Expect = 2e-14
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLETIRGS 174
L T+ I K+D P K+R ++ +II + M + ++ S +++G ET G
Sbjct: 234 LHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFETFTGG 293
Query: 175 NRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYP 342
+ Q+ +F +LDWS +D+R ++ I YT ++S + GY PT+ P
Sbjct: 294 WFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAP 351
Query: 343 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGVPSGLYNTQYLD 510
+P ++ K + L L W F +LPDG YRR G+PSGL+ TQ LD
Sbjct: 352 NHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLD 406
Query: 511 SFGNLFLIIDAMLEFGFTNS 570
S+ N ++ + GF S
Sbjct: 407 SWYNYTMLATILHALGFNPS 426
[18][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R744_9VIRU
Length = 616
Score = 82.8 bits (203), Expect = 2e-14
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLETIRGS 174
L T+ I K+D P K+R ++ +II + M + ++ S +++G ET G
Sbjct: 234 LHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFETFTGG 293
Query: 175 NRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYP 342
+ Q+ +F +LDWS +D+R ++ I YT ++S + GY PT+ P
Sbjct: 294 WFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAP 351
Query: 343 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGVPSGLYNTQYLD 510
+P ++ K + L L W F +LPDG YRR G+PSGL+ TQ LD
Sbjct: 352 NHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLD 406
Query: 511 SFGNLFLIIDAMLEFGFTNS 570
S+ N ++ + GF S
Sbjct: 407 SWYNYTMLATILHALGFNPS 426
[19][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R742_9VIRU
Length = 616
Score = 82.8 bits (203), Expect = 2e-14
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLETIRGS 174
L T+ I K+D P K+R ++ +II + M + ++ S +++G ET G
Sbjct: 234 LHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFETFTGG 293
Query: 175 NRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYP 342
+ Q+ +F +LDWS +D+R ++ I YT ++S + GY PT+ P
Sbjct: 294 WFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAP 351
Query: 343 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGVPSGLYNTQYLD 510
+P ++ K + L L W F +LPDG YRR G+PSGL+ TQ LD
Sbjct: 352 NHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLD 406
Query: 511 SFGNLFLIIDAMLEFGFTNS 570
S+ N ++ + GF S
Sbjct: 407 SWYNYTMLATILHALGFNPS 426
[20][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R739_9VIRU
Length = 616
Score = 82.8 bits (203), Expect = 2e-14
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLETIRGS 174
L T+ I K+D P K+R ++ +II + M + ++ S +++G ET G
Sbjct: 234 LHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFETFTGG 293
Query: 175 NRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYP 342
+ Q+ +F +LDWS +D+R ++ I YT ++S + GY PT+ P
Sbjct: 294 WFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAP 351
Query: 343 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGVPSGLYNTQYLD 510
+P ++ K + L L W F +LPDG YRR G+PSGL+ TQ LD
Sbjct: 352 NHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLD 406
Query: 511 SFGNLFLIIDAMLEFGFTNS 570
S+ N ++ + GF S
Sbjct: 407 SWYNYTMLATILHALGFNPS 426
[21][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
virus RepID=C0STM0_9VIRU
Length = 580
Score = 81.3 bits (199), Expect = 5e-14
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETIRGS- 174
+ T++ I P KVR ++ V + +++E M +PL R + +++G ET+ G
Sbjct: 203 IHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETMLGGW 262
Query: 175 ---NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYP 342
N + + SLDWS +D R L VI D+Y ++S N+GY PT +YP
Sbjct: 263 YKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPTVDYP 322
Query: 343 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGN 522
D H ++ NL ++ T L DG ++RT G+ SG + TQ++DS N
Sbjct: 323 ---DSSTHP--QKLHNLWDWMLTALKFAPCALADGTIWQRTVRGIASGQFTTQFMDSIYN 377
Query: 523 LFLIIDAMLEFGFTNSE 573
+I+ + GF E
Sbjct: 378 GLMILTILSRMGFVIDE 394
[22][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=B2M1T3_9VIRU
Length = 616
Score = 81.3 bits (199), Expect = 5e-14
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLETIRGS 174
L T+ I K+D P K+R ++ +II + M + ++ S +++G ET G
Sbjct: 234 LHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFETFTGG 293
Query: 175 NRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYP 342
+ Q+ +F +LDWS +D+R ++ I YT ++S + GY PT+ P
Sbjct: 294 WFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAP 351
Query: 343 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGVPSGLYNTQYLD 510
+P ++ K + L L W F +LPDG YRR G+PSGL+ TQ D
Sbjct: 352 NHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLFD 406
Query: 511 SFGNLFLIIDAMLEFGFTNS 570
S+ N ++ + GF S
Sbjct: 407 SWYNYTMLATILHALGFNPS 426
[23][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
RepID=B8YNW9_9VIRU
Length = 616
Score = 78.2 bits (191), Expect = 4e-13
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLETIRGS 174
L T+ I K + P K+R ++ +II E ML + I+ + +++G ET G
Sbjct: 234 LHTKTAIVKHNDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPGTTPMLWGYETFTGG 293
Query: 175 ------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTY 333
Y I +F +LDWS +D+R ++ I Y +RS + + GY PT+
Sbjct: 294 WFRLNHQLYCGMIKH---SFLTLDWSRFDKRAYFPLLRRILYP--VRSFLTFDEGYVPTH 348
Query: 334 EYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGVPSGLYNTQYL 507
P +P + K R++ L +L T N +LPDG YRR G+PSGL+ TQ L
Sbjct: 349 AAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLL 405
Query: 508 DSFGNLFLIIDAMLEFGF 561
DS+ N ++ + GF
Sbjct: 406 DSWYNYTMLATILSALGF 423
[24][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
virus II RepID=Q7TDZ9_9VIRU
Length = 610
Score = 77.4 bits (189), Expect = 7e-13
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Frame = +1
Query: 4 FTRNHI-SKRDGPL---KVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLETI 165
F R HI K+ G L KVR V+ + EL+ +PL + + +++G ETI
Sbjct: 242 FARQHIVEKKPGILAQPKVRLVFGAPFTLLTAELIFIWPLQTHLLLMQDFSPMLWGYETI 301
Query: 166 RGS-NRYIEQIARDYST---FFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 333
G R ++ T +LDWS +D+ + +T +R +GY PT+
Sbjct: 302 LGGWYRLRGHLSGKIDTDKLVATLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNGYHPTH 361
Query: 334 EYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYL 507
YP T D DE + R++NL +++ + L+PDG R T G+ SG TQ L
Sbjct: 362 RYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDGTMIRFTHSGIYSGYMQTQIL 421
Query: 508 DSFGNLFLIIDAMLEFGF 561
DS N+ +I + GF
Sbjct: 422 DSLYNMVMIFTMVSRLGF 439
[25][TOP]
>UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus
1 RepID=Q52UL1_9VIRU
Length = 573
Score = 76.3 bits (186), Expect = 2e-12
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
Frame = +1
Query: 37 PLKVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIAR 201
P K+R V+ V I E M +PL + +++ ET+ G N Q +
Sbjct: 196 PPKIRTVFGVPKSLIFAEAMFFWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQ 255
Query: 202 DYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 381
+ T F+LDWS +D R+ + D D ++S Y PT YPT + R
Sbjct: 256 SFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTYPTCRTNPQ-----R 309
Query: 382 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIIDAMLEFGF 561
+ NL +++ T Y + G YRR G+PSG++ TQ+ DSF N +++ + GF
Sbjct: 310 LQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALGF 369
[26][TOP]
>UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA
mycovirus RepID=Q8B0U3_9VIRU
Length = 598
Score = 75.5 bits (184), Expect = 3e-12
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 7/185 (3%)
Frame = +1
Query: 43 KVRPVYAVDDIFIIIELMLTFPLTI--QARKPSCCIMYGLETIRGS--NRYIEQIARD-- 204
K+R V+ V ++ M +PL + + +++G ETI G N Y+E I
Sbjct: 224 KIRVVFGVSKRHVLPSAMFFWPLFFFYLKNRETSPLLWGNETILGGGLNLYMECIIPRLY 283
Query: 205 YSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 381
+STF +DWSS+D R L +I + ++ R+ +GY PT +Y H
Sbjct: 284 FSTFVMVDWSSFDLRSLFSIIRQDIFPNW-RTYFDFENGYIPTNKYRESKADPAH----- 337
Query: 382 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIIDAMLEFGF 561
++ L +++ M LPDG Y+R G+PSGL+ TQ+LDSF N+ +I+ + GF
Sbjct: 338 LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSGLFTTQFLDSFYNMIMILTILGRMGF 397
Query: 562 TNSEI 576
S +
Sbjct: 398 GISTV 402
[27][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
RepID=Q64FP0_WCCV1
Length = 616
Score = 75.5 bits (184), Expect = 3e-12
Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 11/189 (5%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLETIRGS 174
L T+ I K++ P K+R ++ +II E M + I+ + +++G ET G
Sbjct: 234 LHTKTAIVKKNDPNKMRTIWGASKPWIIAETMFYWEYLAWIKHNPGATPMLWGYETFTGG 293
Query: 175 ------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTY 333
+ I R +F +LDWS +D+R ++ I YT +++ + GY PT+
Sbjct: 294 WFRLNHELFCGLIQR---SFLTLDWSRFDKRAYFPLLRRILYT--VKTFLTFEEGYVPTH 348
Query: 334 EYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGVPSGLYNTQYL 507
PT+P + + R++ L +L T N +LPDG YRR G+PSGL+ TQ L
Sbjct: 349 AAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLL 405
Query: 508 DSFGNLFLI 534
DS+ N ++
Sbjct: 406 DSWYNYTML 414
[28][TOP]
>UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry
disease-associated mycovirus RepID=Q65A75_9VIRU
Length = 621
Score = 73.9 bits (180), Expect = 8e-12
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLETIRGS 174
L T+ I K+D P K+R ++ +II + ML + A+ +P +++ ET G
Sbjct: 236 LHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYETFTGG 295
Query: 175 -NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT 345
R + Y ++ +LDW +D++ I D + D + + + ++GY PT +YP
Sbjct: 296 WLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTKDYPD 354
Query: 346 YPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNL 525
+ R+ L + + + +LP+G+ Y R G+PSGL+ TQ +DS+ N
Sbjct: 355 TKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGLFITQLIDSWYNY 414
Query: 526 FLIIDAMLEFGF 561
++ + GF
Sbjct: 415 TMLATILSAMGF 426
[29][TOP]
>UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004
RepID=Q5XM56_9VIRU
Length = 573
Score = 73.9 bits (180), Expect = 8e-12
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
Frame = +1
Query: 37 PLKVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIAR 201
P K+R V+ V I E M ++PL + +++ ET+ G N Q +
Sbjct: 196 PPKIRTVFGVPKSLIFAEAMFSWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQ 255
Query: 202 DYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 381
+ T F+LDWS +D R+ + D D ++S Y PT PT + R
Sbjct: 256 SFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTNPTCRTNPQ-----R 309
Query: 382 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIIDAMLEFGF 561
+ NL +++ T Y + G YRR G+PSG++ TQ+ DSF N +++ + GF
Sbjct: 310 LQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALGF 369
[30][TOP]
>UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot
associated partitivirus RepID=Q65A70_9VIRU
Length = 621
Score = 72.4 bits (176), Expect = 2e-11
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLETIRGS 174
L T+ I K+D P K+R ++ +II + ML + A+ +P +++ ET G
Sbjct: 236 LHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYETFTGG 295
Query: 175 -NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT 345
R + Y ++ +LDW +D++ I D + D + + + ++GY PT +YP
Sbjct: 296 WLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTKDYPD 354
Query: 346 YPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNL 525
R+ L + + + +LP+G+ Y R G+PSGL+ TQ +DS+ N
Sbjct: 355 TKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGLFITQLIDSWYNY 414
Query: 526 FLIIDAMLEFGF 561
++ + GF
Sbjct: 415 TMLATILSAMGF 426
[31][TOP]
>UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum
cryptic virus 1 RepID=B7ZGY8_9VIRU
Length = 587
Score = 72.0 bits (175), Expect = 3e-11
Identities = 64/192 (33%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Frame = +1
Query: 10 RNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT----IQARKPSCCIMYGLETIRGS- 174
R+ I P KVR VY + I + M +PL I + P +++G ET+ G
Sbjct: 211 RSAIQPISDPNKVRFVYGYPKVGIFPQAMFFWPLFVYYHITGQSP---LLWGYETMTGGW 267
Query: 175 ---NRYIEQIARDYSTFFSLDWSSYD-QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYP 342
N + + LDW +D L V DI + S +HGYQPT +Y
Sbjct: 268 YRLNHELRSTPGISGSILELDWQGFDIHALFEVFDDIKNLSW--SFFDCSHGYQPTKDYQ 325
Query: 343 -TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFG 519
T D D R+ NL ++ LPDG +RR+ GVPSGL+ TQ+LDS
Sbjct: 326 GTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPSGLFITQWLDSVY 379
Query: 520 N---LFLIIDAM 546
N +F I+DAM
Sbjct: 380 NCIMIFTILDAM 391
[32][TOP]
>UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum
partitivirus S RepID=C7ENF4_9VIRU
Length = 580
Score = 70.5 bits (171), Expect = 9e-11
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 7/189 (3%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCC---IMYGLETIRG 171
L R H+ + K+R V+ V + ++ E M +PL +++G E ++G
Sbjct: 195 LHARAHVVGHEDADKIRAVFGVPKLLLMAENMFIWPLQAYYLNQDTTKHHLLWGNEIMKG 254
Query: 172 SNRYIE---QIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEY 339
+ + Q R T SLDWS +D+R L VI D++ +S H Y+PT Y
Sbjct: 255 GWKKLWGQLQNGRISRTILSLDWSEFDKRALHEVIDDVH--SMWKSWFDFTH-YEPTIFY 311
Query: 340 PTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFG 519
+ H+ R++NL ++ + L PDG Y+ T G+ SG TQ LDSF
Sbjct: 312 EKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGFQQTQLLDSFV 368
Query: 520 NLFLIIDAM 546
N+ +++ +
Sbjct: 369 NMIMLLTVL 377
[33][TOP]
>UniRef100_Q6BE42 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-2 RepID=Q6BE42_9VIRU
Length = 538
Score = 70.1 bits (170), Expect = 1e-10
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 19/192 (9%)
Frame = +1
Query: 43 KVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGSNRYI--EQIARD--Y 207
KVR V+ V I E M +PL +I + +++ E++ G + E AR Y
Sbjct: 154 KVRTVFGVPKYLIFAEAMFFWPLFSIYFTSANTPLLWNYESLNGGWHRLDSEYHARYTMY 213
Query: 208 STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEY-PTYPDLDE------H 366
S F+LDWS +D R +Y+T + + ++ + Y PT P LDE H
Sbjct: 214 SPIFNLDWSEFDMR-------VYFTVWSDIIDRVSTYFCFCGRYCPTLPVLDEETGTQLH 266
Query: 367 KLY-------HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNL 525
Y R+ NL ++ Y NM + G ++R+ G+PSG++ TQ+ DSF N
Sbjct: 267 PPYSEPFTNPQRLRNLWFWIRYAYFNMAAVTTTGKIFKRSFAGMPSGIFCTQFYDSFYNA 326
Query: 526 FLIIDAMLEFGF 561
+I+ +L G+
Sbjct: 327 VIIVTCLLALGY 338
[34][TOP]
>UniRef100_C1KDH6 Putative RNA-dependent RNA polymerase n=1 Tax=Heterobasidion
insulare T-type partitivirus RepID=C1KDH6_9VIRU
Length = 585
Score = 68.9 bits (167), Expect = 3e-10
Identities = 59/184 (32%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Frame = +1
Query: 43 KVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGSNRYIEQ---IARDYS 210
K+R +Y V I+ + M +PL + + +++G ET G I + R YS
Sbjct: 223 KIRVIYGVSKRHILAQAMFFWPLFRYYIEEHTSPLLWGNETFTGGMLKIHNLISVPRLYS 282
Query: 211 -TFFSLDWSSYDQR----LPRVITDIY--YTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 369
T+ ++DWS +D R + R I D + Y DF Y PT TYPD
Sbjct: 283 QTYLTVDWSGFDLRSLFTIQREIFDDWRTYFDFT--------AYIPTR---TYPDSKTDP 331
Query: 370 LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIIDAML 549
+ RM+ L ++ M F+LPD Y R +PSGL+ TQ+LDS NL +I +
Sbjct: 332 I--RMERLWNWQRDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYNLIMIYTILS 389
Query: 550 EFGF 561
GF
Sbjct: 390 AMGF 393
[35][TOP]
>UniRef100_B7X9J3 Putative RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes
isometric virus RepID=B7X9J3_9VIRU
Length = 587
Score = 67.0 bits (162), Expect = 1e-09
Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPS--CCIMYGLETIRGS 174
L +R H+ K D P K+R V+ V + + E +P+ S +++G E + G
Sbjct: 201 LRSRFHVVKADEPDKIRAVFGVPKLLLQAEQTFIWPMLSHYLDNSDRYPLLWGNEMMSGG 260
Query: 175 NRYIEQI---ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYP 342
R + + R +T SLDWS +D+R L VI D++ D RS + Y PT YP
Sbjct: 261 WRKLNRTIYNGRTVNTVLSLDWSQFDKRALHEVIDDVH--DIWRSYFDFSF-YMPTSFYP 317
Query: 343 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGN 522
P DE R++NL ++ L G + G+ SG TQ LDSF N
Sbjct: 318 NAP-TDE----SRLENLWEWMTYNIKKYPIRLSSGKLSQWRFNGIASGFQQTQLLDSFVN 372
Query: 523 LFLIIDAMLEFG 558
+ +I+ + G
Sbjct: 373 MIMILTCLSRAG 384
[36][TOP]
>UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1
Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU
Length = 367
Score = 65.9 bits (159), Expect = 2e-09
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 9/187 (4%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLETIRGS 174
L + + K D P K+R ++ V ++II E + + I+ +++G ET G
Sbjct: 5 LHIKTAVVKFDAPNKLRTIWGVSKLWIISEAQIYWEYIAWIKLNPGITPMLWGYETFTGG 64
Query: 175 NRYIEQIAR---DYSTFFSLDWSSYDQRLPR-VITDIYYTDFLRSLIVINHGYQPTYEYP 342
+ + + T+ ++DWS +D+R +I I+ R +GY PT +YP
Sbjct: 65 WFRLYRTLHTPGENVTYITIDWSRFDKRAYFWLIRKIFIRT--RQFFDFENGYTPTKDYP 122
Query: 343 ---TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDS 513
T+PD ++ L + + + +LP+G+ Y+R G+PSGL+ TQ +DS
Sbjct: 123 FSPTHPD--------KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPSGLFITQLMDS 174
Query: 514 FGNLFLI 534
+ N ++
Sbjct: 175 WYNYVML 181
[37][TOP]
>UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus
partitivirus RepID=A2VA07_9VIRU
Length = 132
Score = 54.7 bits (130), Expect = 5e-06
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Frame = +1
Query: 1 LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETIRG 171
L +R+H+ + D P K+R V+ V + +++E M + + + +++G ETIRG
Sbjct: 10 LHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETIRG 69
Query: 172 S-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 330
+ I Q+ ++ S+ S DWS +D + L VI D++ D +S N GY+P+
Sbjct: 70 GWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123