BB911321 ( RCE10420 )

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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
           virus China/Mar2007 RepID=A8W7G1_9VIRU
          Length = 723

 Score =  375 bits (962), Expect = e-102
 Identities = 178/192 (92%), Positives = 184/192 (95%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
           LFTRNHISKR G LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSN 
Sbjct: 311 LFTRNHISKRSGTLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNH 370

Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
           YI+++AR YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD
Sbjct: 371 YIDRLARPYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 430

Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIID 540
           EHKLY RMDNLL+FLHTWYNNMTFLLPDGYAYRRT CGVPSGLYNTQYLDSFGNLFLIID
Sbjct: 431 EHKLYSRMDNLLYFLHTWYNNMTFLLPDGYAYRRTHCGVPSGLYNTQYLDSFGNLFLIID 490

Query: 541 AMLEFGFTNSEI 576
           AM+EF FT+ EI
Sbjct: 491 AMIEFEFTDDEI 502

[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
           partitivirus 1-W8 RepID=Q50LH7_9VIRU
          Length = 709

 Score =  302 bits (773), Expect = 1e-80
 Identities = 142/196 (72%), Positives = 162/196 (82%), Gaps = 4/196 (2%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKP----SCCIMYGLETIR 168
           LFTRNHIS RDG LK RPVYAVDD FI+ ELM++FPL + AR P      CIMY  ETIR
Sbjct: 296 LFTRNHISDRDGFLKQRPVYAVDDFFILCELMISFPLHVMARYPINGIKSCIMYSFETIR 355

Query: 169 GSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY 348
           GSNRY++ IARD+ +FF++DWSS+DQR+PRVITDI++TDFLR LIVINHGYQPTYEYP Y
Sbjct: 356 GSNRYLDSIARDFISFFTIDWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQPTYEYPAY 415

Query: 349 PDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLF 528
           PDL EH LY RM+NLLHFLHTWYNNM F+  DG+AY R+  GVPSGL NTQYLDSF NLF
Sbjct: 416 PDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGFAYLRSAAGVPSGLLNTQYLDSFCNLF 475

Query: 529 LIIDAMLEFGFTNSEI 576
           LIID + EFGFT +EI
Sbjct: 476 LIIDGLFEFGFTQAEI 491

[3][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-1 RepID=Q6BE43_9VIRU
          Length = 706

 Score =  291 bits (745), Expect = 3e-77
 Identities = 133/192 (69%), Positives = 157/192 (81%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
           LFTRNHIS RDG LK RPVYAVDD+F+I+E+MLTFPL + AR P CCIMYGLETIRGSN 
Sbjct: 296 LFTRNHISDRDGNLKQRPVYAVDDLFLILEVMLTFPLLVMARLPECCIMYGLETIRGSNH 355

Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
           +I+  A+ + ++F++DWS YDQRLPR ITD+YYTDFL SLI+IN GYQPT +Y  YPDL 
Sbjct: 356 WIDSTAKRFRSYFTIDWSQYDQRLPRCITDLYYTDFLESLIIINFGYQPTADYADYPDLT 415

Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIID 540
              ++ RM NLLHFLHTWYNNM ++  DG+AY R  CGVPSGL+NTQYLDSFGNL+LIID
Sbjct: 416 PDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGVPSGLFNTQYLDSFGNLYLIID 475

Query: 541 AMLEFGFTNSEI 576
            MLEFG +  EI
Sbjct: 476 GMLEFGISIDEI 487

[4][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
           RepID=Q5GHF1_9VIRU
          Length = 706

 Score =  289 bits (739), Expect = 1e-76
 Identities = 130/192 (67%), Positives = 160/192 (83%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
           LFTRNHIS RDG LK RPVYA+DD+FI +E M+TFPL + ARK  CCIMYG ETIRGSNR
Sbjct: 295 LFTRNHISDRDGNLKQRPVYAMDDLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNR 354

Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
            I++IA  + +FF++DWS +DQRLPRVITDI+++DFL  +IVI+HGYQPTY+YP+YPDL 
Sbjct: 355 QIDKIASSFRSFFTIDWSGFDQRLPRVITDIFWSDFLERMIVISHGYQPTYDYPSYPDLT 414

Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIID 540
             K++ RMDN+L FLHTWYNN+ F+  DG+AY RTC GVPSGL NTQYLDSF NLFLI D
Sbjct: 415 PDKMFQRMDNILFFLHTWYNNLVFVTADGFAYIRTCAGVPSGLLNTQYLDSFSNLFLIFD 474

Query: 541 AMLEFGFTNSEI 576
            ++EFG +++EI
Sbjct: 475 GLIEFGCSDAEI 486

[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=D0EIN9_9VIRU
          Length = 502

 Score =  283 bits (723), Expect = 9e-75
 Identities = 126/192 (65%), Positives = 159/192 (82%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
           LFTRNHIS RDG LK RPVYA+DD+FI +E  +TFPL + ARK  CCIMYG ETIRGSNR
Sbjct: 295 LFTRNHISDRDGNLKQRPVYAMDDLFIRLESKITFPLHVMARKIECCIMYGYETIRGSNR 354

Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
            I+++A +Y ++F++DWS +DQRLPRVITDI++TDFL  +IVI+HGYQPT++YP+YPDL 
Sbjct: 355 QIDKLASNYKSYFTIDWSGFDQRLPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLT 414

Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIID 540
             K++ RM N+L FLHTWYNN+ ++  DG+AY RTC GVPSGL NTQYLDSF NLFLI D
Sbjct: 415 PDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFLIFD 474

Query: 541 AMLEFGFTNSEI 576
            ++EFG +++EI
Sbjct: 475 GLIEFGCSDAEI 486

[6][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
           RepID=Q9YX75_9VIRU
          Length = 673

 Score =  266 bits (681), Expect = 7e-70
 Identities = 120/193 (62%), Positives = 155/193 (80%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
           LFTRNHIS RDG LK RPVYAVDD+F+ IE MLTFP  + ARKP CCIMYGLETIRGSN+
Sbjct: 292 LFTRNHISDRDGILKQRPVYAVDDLFLTIESMLTFPAHVIARKPECCIMYGLETIRGSNQ 351

Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
            +++IA DY +FF++DWS +DQRLP VI  +++T+++  L+V+NHGY PTYEYP+YPDL 
Sbjct: 352 ILDKIASDYKSFFTIDWSGFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYEYPSYPDLT 411

Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIID 540
            + +  R+ NL+ FL TWY NM F+  DG++Y R   GVPSG+ NTQ+LDSFGNLFL+ID
Sbjct: 412 TNDMVSRLTNLITFLATWYFNMVFVTADGFSYVREHAGVPSGMLNTQFLDSFGNLFLLID 471

Query: 541 AMLEFGFTNSEIE 579
            ++EFG T++EI+
Sbjct: 472 GLIEFGSTDAEID 484

[7][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=B2L075_9VIRU
          Length = 185

 Score =  249 bits (635), Expect = 1e-64
 Identities = 109/169 (64%), Positives = 140/169 (82%)
 Frame = +1

Query: 70  DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 249
           D+FI +E M+TFPL + ARK  CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1   DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60

Query: 250 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 429
           LPRVITDI++TDFL  +IVI+HGYQPT++YP+YPDL   K++ RM N+L FLHTWYNN+ 
Sbjct: 61  LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120

Query: 430 FLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 576
           ++  DG+AY RTC GVPSGL NTQYLDSF NLFLI D ++EFG +++EI
Sbjct: 121 YVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEI 169

[8][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
           virus 717 RepID=Q9Q9X2_9VIRU
          Length = 730

 Score =  232 bits (591), Expect = 2e-59
 Identities = 110/193 (56%), Positives = 145/193 (75%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
           +FTRNHISKRDG LKVRPVYAVD++F+ +E ML FP T+QARKP CCIMYGLETIRGSN 
Sbjct: 323 MFTRNHISKRDGTLKVRPVYAVDELFLDLECMLAFPATVQARKPECCIMYGLETIRGSNI 382

Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLD 360
            ++ +A+ + +F ++DWS YDQRLP  I   ++  +L SL++I+HGY PT EY     ++
Sbjct: 383 KLDSLAQGFISFATIDWSGYDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSEYED-TSMN 441

Query: 361 EHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIID 540
              ++ R  NL++F  TWY NM FL  DG+A+RR   GVPSG+  TQ+LDSFGNL+LIID
Sbjct: 442 ISDMFTRFFNLINFTATWYFNMVFLSADGFAFRRQFAGVPSGMLLTQFLDSFGNLYLIID 501

Query: 541 AMLEFGFTNSEIE 579
           ++LEFG T  +I+
Sbjct: 502 SLLEFGCTYDDIK 514

[9][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
           hypoxylon virus RepID=Q85055_AHV
          Length = 665

 Score =  177 bits (448), Expect = 7e-43
 Identities = 94/216 (43%), Positives = 131/216 (60%), Gaps = 23/216 (10%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
           L  R+HISKRD  LKVRPVY    I+I IE ML +PL  QARK  CCIMYGLETIRG   
Sbjct: 257 LLVRSHISKRDN-LKVRPVYNAPMIYIRIECMLFYPLLAQARKRDCCIMYGLETIRGGMN 315

Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQP----------- 327
            +E+I+  +++F  +DWS +D   P  I++ ++  +L + I+I+HGY             
Sbjct: 316 ELERISNAFNSFLLIDWSRFDHLAPFTISNFFFKKWLPTKILIDHGYAQISNYHDHVHSF 375

Query: 328 ------------TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCC 471
                       + EY T P+        ++ NL+ FL  WY +M F+ PDG+AYRRT  
Sbjct: 376 SAQAQSHGIPMISKEYQTPPEAT--VFAKKVLNLISFLERWYRDMVFVTPDGFAYRRTHA 433

Query: 472 GVPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 579
           GVPSG+  TQ++DSF NL +++D ++EFGFT+ EI+
Sbjct: 434 GVPSGILMTQFIDSFVNLTILLDGLIEFGFTDEEIK 469

[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
           1 RepID=Q5DM90_9VIRU
          Length = 663

 Score =  167 bits (424), Expect = 4e-40
 Identities = 89/213 (41%), Positives = 127/213 (59%), Gaps = 21/213 (9%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
           L  R+HIS     LKVRPV     IF+ IE ML +PL  Q RK  C IMYGLETIRG   
Sbjct: 261 LLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMM 319

Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY---- 348
            IE +A  +S F  +DWS +DQ +P  + D++Y D++ +LI+++ GY   + Y  +    
Sbjct: 320 EIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSF 379

Query: 349 ------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGV 477
                        +L+E         ++++NLL F++TW+  M ++ PDG+AYRRT  GV
Sbjct: 380 AAQARKLGVHGNSNLNEAPPETAIFANKVENLLKFINTWFKEMVYITPDGFAYRRTFAGV 439

Query: 478 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 576
           PSG+  TQ +DSF NL ++ID++ EFGF  S+I
Sbjct: 440 PSGILCTQLIDSFVNLVVLIDSLFEFGFHESDI 472

[11][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6EM35_9VIRU
          Length = 663

 Score =  167 bits (422), Expect = 7e-40
 Identities = 89/214 (41%), Positives = 127/214 (59%), Gaps = 21/214 (9%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
           L  R+HIS     LKVRPV     IF+ IE ML +PL  Q RK  C IMYG ETIRG   
Sbjct: 261 LLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGFETIRGGMM 319

Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY---- 348
            IE +A  +S F  +DWS +DQ +P  + D++Y D++ +LI+I+ GY   + Y  +    
Sbjct: 320 EIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHNYNDHVHSF 379

Query: 349 ------------PDLDE-----HKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGV 477
                        +L+E         ++++NLL F++TW+  M ++ PDG+AYRRT  GV
Sbjct: 380 AAQARKLGVHGNSNLNEAPPEASVFANKVENLLKFINTWFKEMVYITPDGFAYRRTFAGV 439

Query: 478 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 579
           PSG+  TQ +DSF NL ++ID++ EFGF  S+I+
Sbjct: 440 PSGILCTQLIDSFVNLVVLIDSLFEFGFHESDIK 473

[12][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6X9T6_9VIRU
          Length = 663

 Score =  166 bits (419), Expect = 2e-39
 Identities = 88/214 (41%), Positives = 127/214 (59%), Gaps = 21/214 (9%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
           L  R+HIS     LKVRPV     IF+ IE ML +PL  Q RK  C IMYGLETIRG   
Sbjct: 261 LLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMM 319

Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY---- 348
            IE +A  +S F  +DWS +DQ +P  + D++Y D++ +LI+++ GY   + Y  +    
Sbjct: 320 EIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSF 379

Query: 349 ------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGV 477
                        +L+E         ++++NLL F++TW+  M ++ PDG+AY RT  GV
Sbjct: 380 AAQARKLGVHGDSNLNEAPPEAAVFANKVENLLKFINTWFKEMVYITPDGFAYSRTFAGV 439

Query: 478 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 579
           PSG+  TQ +DSF NL ++ID++ EFGF  S+I+
Sbjct: 440 PSGILCTQLIDSFVNLVVLIDSLFEFGFHESDIK 473

[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
           annosum P-type partitivirus RepID=Q8QY51_9VIRU
          Length = 734

 Score =  141 bits (355), Expect = 4e-32
 Identities = 82/224 (36%), Positives = 118/224 (52%), Gaps = 31/224 (13%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNR 180
           ++ R+ ISK    LKVRPVY    +F+++E MLT  L  Q RKP  CI++  ETIRG   
Sbjct: 284 MYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRGGMH 342

Query: 181 YIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT--YEYPTYPD 354
            + +I+ +++ F   D+S +DQ  P  I   ++  F+  +I ++ GYQ +  Y    Y  
Sbjct: 343 ELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQYA- 401

Query: 355 LDEHKLYHRMD-----------------------------NLLHFLHTWYNNMTFLLPDG 447
            D  K Y  +D                             N+L F+  WY  M F+ PDG
Sbjct: 402 YDFEKKYDNLDKSEPKFQEFAKKSNNLFPKHVVAFSFVIFNILSFIWWWYVFMVFITPDG 461

Query: 448 YAYRRTCCGVPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 579
           Y Y R   GVPSG++ TQ LDSF NLF+ +DA+LEFGF+  +I+
Sbjct: 462 YGYVRLLAGVPSGIFMTQILDSFVNLFIFVDALLEFGFSIDQIK 505

[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
          Length = 576

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 59/192 (30%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
 Frame = +1

Query: 4   FTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLETIRGSN 177
           F R H+ + D P KVR V+      ++ ELM  +PL +   AR P   +++G ET+ G  
Sbjct: 207 FARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYETLTGGW 266

Query: 178 RYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT 345
             +   A D    YST  +LDWS +D+     +    +   +R +     GY PT  YP 
Sbjct: 267 SRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPTISYPN 326

Query: 346 YPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNL 525
            PD +      R++NL +++      +  +LPDG   +    G+ SG + TQ LDS  N 
Sbjct: 327 APDTNP----DRLENLWNWMTDAILTVPLMLPDGQLLQFNHSGIYSGYFQTQILDSIYNC 382

Query: 526 FLIIDAMLEFGF 561
            +I   +   GF
Sbjct: 383 VMIYTILSRMGF 394

[15][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
           RepID=B2CGP3_9VIRU
          Length = 616

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLETIRGS 174
           L T+  I K+D P K+R ++     +II E ML +      +  PS   +++G ET  G 
Sbjct: 234 LHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYETFTGG 293

Query: 175 NRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTY 333
                ++ RD        +F +LDWS +D+R    ++  I YT   R+ +  + GY PT+
Sbjct: 294 ---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGYVPTH 348

Query: 334 EYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGVPSGLYNTQYL 507
             PT+P  D  K   R++ L  +L T  N      +LPDG  YRR   G+PSGL+ TQ L
Sbjct: 349 SAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLL 405

Query: 508 DSFGNLFLIIDAMLEFGF 561
           DS+ N  ++   +   GF
Sbjct: 406 DSWYNYTMLATLLSALGF 423

[16][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
           cryptic virus 1 RepID=D0EP81_9VIRU
          Length = 559

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLETIRGS 174
           L T+  I K+D P K+R ++     +II E ML +      +  PS   +++G ET  G 
Sbjct: 178 LHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYETFTGG 237

Query: 175 NRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTY 333
                ++ RD        +F +LDWS +D+R    ++  I YT   R+ +  + GY PT+
Sbjct: 238 ---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGYVPTH 292

Query: 334 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDS 513
             PT+P  D  K        L  L   +     +LPDG  YRR   G+PSGL+ TQ LDS
Sbjct: 293 SAPTHPQWDHTKAIRHERLWLWTLENLFE-APIILPDGRMYRRHFAGIPSGLFITQSLDS 351

Query: 514 FGNLFLIIDAMLEFGF 561
           + N  ++   +   GF
Sbjct: 352 WYNYTMLATLLSALGF 367

[17][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=Q4KUU4_9VIRU
          Length = 616

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLETIRGS 174
           L T+  I K+D P K+R ++     +II + M    +   ++    S  +++G ET  G 
Sbjct: 234 LHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFETFTGG 293

Query: 175 NRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYP 342
              + Q+        +F +LDWS +D+R    ++  I YT  ++S +    GY PT+  P
Sbjct: 294 WFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAP 351

Query: 343 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGVPSGLYNTQYLD 510
            +P  ++ K      + L  L  W     F    +LPDG  YRR   G+PSGL+ TQ LD
Sbjct: 352 NHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLD 406

Query: 511 SFGNLFLIIDAMLEFGFTNS 570
           S+ N  ++   +   GF  S
Sbjct: 407 SWYNYTMLATILHALGFNPS 426

[18][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R744_9VIRU
          Length = 616

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLETIRGS 174
           L T+  I K+D P K+R ++     +II + M    +   ++    S  +++G ET  G 
Sbjct: 234 LHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFETFTGG 293

Query: 175 NRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYP 342
              + Q+        +F +LDWS +D+R    ++  I YT  ++S +    GY PT+  P
Sbjct: 294 WFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAP 351

Query: 343 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGVPSGLYNTQYLD 510
            +P  ++ K      + L  L  W     F    +LPDG  YRR   G+PSGL+ TQ LD
Sbjct: 352 NHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLD 406

Query: 511 SFGNLFLIIDAMLEFGFTNS 570
           S+ N  ++   +   GF  S
Sbjct: 407 SWYNYTMLATILHALGFNPS 426

[19][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R742_9VIRU
          Length = 616

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLETIRGS 174
           L T+  I K+D P K+R ++     +II + M    +   ++    S  +++G ET  G 
Sbjct: 234 LHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFETFTGG 293

Query: 175 NRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYP 342
              + Q+        +F +LDWS +D+R    ++  I YT  ++S +    GY PT+  P
Sbjct: 294 WFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAP 351

Query: 343 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGVPSGLYNTQYLD 510
            +P  ++ K      + L  L  W     F    +LPDG  YRR   G+PSGL+ TQ LD
Sbjct: 352 NHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLD 406

Query: 511 SFGNLFLIIDAMLEFGFTNS 570
           S+ N  ++   +   GF  S
Sbjct: 407 SWYNYTMLATILHALGFNPS 426

[20][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R739_9VIRU
          Length = 616

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLETIRGS 174
           L T+  I K+D P K+R ++     +II + M    +   ++    S  +++G ET  G 
Sbjct: 234 LHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFETFTGG 293

Query: 175 NRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYP 342
              + Q+        +F +LDWS +D+R    ++  I YT  ++S +    GY PT+  P
Sbjct: 294 WFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAP 351

Query: 343 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGVPSGLYNTQYLD 510
            +P  ++ K      + L  L  W     F    +LPDG  YRR   G+PSGL+ TQ LD
Sbjct: 352 NHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLD 406

Query: 511 SFGNLFLIIDAMLEFGFTNS 570
           S+ N  ++   +   GF  S
Sbjct: 407 SWYNYTMLATILHALGFNPS 426

[21][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
           virus RepID=C0STM0_9VIRU
          Length = 580

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETIRGS- 174
           + T++ I     P KVR ++ V  + +++E M  +PL    R +    +++G ET+ G  
Sbjct: 203 IHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETMLGGW 262

Query: 175 ---NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYP 342
              N  +        +  SLDWS +D R L  VI D+Y    ++S    N+GY PT +YP
Sbjct: 263 YKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPTVDYP 322

Query: 343 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGN 522
              D   H    ++ NL  ++ T        L DG  ++RT  G+ SG + TQ++DS  N
Sbjct: 323 ---DSSTHP--QKLHNLWDWMLTALKFAPCALADGTIWQRTVRGIASGQFTTQFMDSIYN 377

Query: 523 LFLIIDAMLEFGFTNSE 573
             +I+  +   GF   E
Sbjct: 378 GLMILTILSRMGFVIDE 394

[22][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=B2M1T3_9VIRU
          Length = 616

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELML--TFPLTIQARKPSCCIMYGLETIRGS 174
           L T+  I K+D P K+R ++     +II + M    +   ++    S  +++G ET  G 
Sbjct: 234 LHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYWEYQAWVKHNPGSTPMLWGFETFTGG 293

Query: 175 NRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYP 342
              + Q+        +F +LDWS +D+R    ++  I YT  ++S +    GY PT+  P
Sbjct: 294 WFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAP 351

Query: 343 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGVPSGLYNTQYLD 510
            +P  ++ K      + L  L  W     F    +LPDG  YRR   G+PSGL+ TQ  D
Sbjct: 352 NHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLFD 406

Query: 511 SFGNLFLIIDAMLEFGFTNS 570
           S+ N  ++   +   GF  S
Sbjct: 407 SWYNYTMLATILHALGFNPS 426

[23][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
           RepID=B8YNW9_9VIRU
          Length = 616

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLETIRGS 174
           L T+  I K + P K+R ++     +II E ML +     I+    +  +++G ET  G 
Sbjct: 234 LHTKTAIVKHNDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPGTTPMLWGYETFTGG 293

Query: 175 ------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTY 333
                   Y   I     +F +LDWS +D+R    ++  I Y   +RS +  + GY PT+
Sbjct: 294 WFRLNHQLYCGMIKH---SFLTLDWSRFDKRAYFPLLRRILYP--VRSFLTFDEGYVPTH 348

Query: 334 EYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGVPSGLYNTQYL 507
             P +P  +  K   R++ L  +L T  N      +LPDG  YRR   G+PSGL+ TQ L
Sbjct: 349 AAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLL 405

Query: 508 DSFGNLFLIIDAMLEFGF 561
           DS+ N  ++   +   GF
Sbjct: 406 DSWYNYTMLATILSALGF 423

[24][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
           virus II RepID=Q7TDZ9_9VIRU
          Length = 610

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
 Frame = +1

Query: 4   FTRNHI-SKRDGPL---KVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLETI 165
           F R HI  K+ G L   KVR V+      +  EL+  +PL   +   +    +++G ETI
Sbjct: 242 FARQHIVEKKPGILAQPKVRLVFGAPFTLLTAELIFIWPLQTHLLLMQDFSPMLWGYETI 301

Query: 166 RGS-NRYIEQIARDYST---FFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 333
            G   R    ++    T     +LDWS +D+     +    +T  +R      +GY PT+
Sbjct: 302 LGGWYRLRGHLSGKIDTDKLVATLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNGYHPTH 361

Query: 334 EYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYL 507
            YP  T  D DE  +  R++NL +++      +  L+PDG   R T  G+ SG   TQ L
Sbjct: 362 RYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDGTMIRFTHSGIYSGYMQTQIL 421

Query: 508 DSFGNLFLIIDAMLEFGF 561
           DS  N+ +I   +   GF
Sbjct: 422 DSLYNMVMIFTMVSRLGF 439

[25][TOP]
>UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus
           1 RepID=Q52UL1_9VIRU
          Length = 573

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
 Frame = +1

Query: 37  PLKVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIAR 201
           P K+R V+ V    I  E M  +PL +         +++  ET+ G     N    Q  +
Sbjct: 196 PPKIRTVFGVPKSLIFAEAMFFWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQ 255

Query: 202 DYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 381
            + T F+LDWS +D R+   + D    D ++S       Y PT  YPT     +     R
Sbjct: 256 SFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTYPTCRTNPQ-----R 309

Query: 382 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIIDAMLEFGF 561
           + NL +++ T Y +       G  YRR   G+PSG++ TQ+ DSF N  +++  +   GF
Sbjct: 310 LQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALGF 369

[26][TOP]
>UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA
           mycovirus RepID=Q8B0U3_9VIRU
          Length = 598

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 7/185 (3%)
 Frame = +1

Query: 43  KVRPVYAVDDIFIIIELMLTFPLTI--QARKPSCCIMYGLETIRGS--NRYIEQIARD-- 204
           K+R V+ V    ++   M  +PL       + +  +++G ETI G   N Y+E I     
Sbjct: 224 KIRVVFGVSKRHVLPSAMFFWPLFFFYLKNRETSPLLWGNETILGGGLNLYMECIIPRLY 283

Query: 205 YSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 381
           +STF  +DWSS+D R L  +I    + ++ R+     +GY PT +Y        H     
Sbjct: 284 FSTFVMVDWSSFDLRSLFSIIRQDIFPNW-RTYFDFENGYIPTNKYRESKADPAH----- 337

Query: 382 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIIDAMLEFGF 561
           ++ L +++      M   LPDG  Y+R   G+PSGL+ TQ+LDSF N+ +I+  +   GF
Sbjct: 338 LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSGLFTTQFLDSFYNMIMILTILGRMGF 397

Query: 562 TNSEI 576
             S +
Sbjct: 398 GISTV 402

[27][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
           RepID=Q64FP0_WCCV1
          Length = 616

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 11/189 (5%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLETIRGS 174
           L T+  I K++ P K+R ++     +II E M  +     I+    +  +++G ET  G 
Sbjct: 234 LHTKTAIVKKNDPNKMRTIWGASKPWIIAETMFYWEYLAWIKHNPGATPMLWGYETFTGG 293

Query: 175 ------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTY 333
                   +   I R   +F +LDWS +D+R    ++  I YT  +++ +    GY PT+
Sbjct: 294 WFRLNHELFCGLIQR---SFLTLDWSRFDKRAYFPLLRRILYT--VKTFLTFEEGYVPTH 348

Query: 334 EYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGVPSGLYNTQYL 507
             PT+P   +  +  R++ L  +L T  N      +LPDG  YRR   G+PSGL+ TQ L
Sbjct: 349 AAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLL 405

Query: 508 DSFGNLFLI 534
           DS+ N  ++
Sbjct: 406 DSWYNYTML 414

[28][TOP]
>UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry
           disease-associated mycovirus RepID=Q65A75_9VIRU
          Length = 621

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLETIRGS 174
           L T+  I K+D P K+R ++     +II + ML +     A+ +P    +++  ET  G 
Sbjct: 236 LHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYETFTGG 295

Query: 175 -NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT 345
             R    +   Y   ++ +LDW  +D++    I D  + D + + +  ++GY PT +YP 
Sbjct: 296 WLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTKDYPD 354

Query: 346 YPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNL 525
                  +   R+  L  +    + +   +LP+G+ Y R   G+PSGL+ TQ +DS+ N 
Sbjct: 355 TKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGLFITQLIDSWYNY 414

Query: 526 FLIIDAMLEFGF 561
            ++   +   GF
Sbjct: 415 TMLATILSAMGF 426

[29][TOP]
>UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004
           RepID=Q5XM56_9VIRU
          Length = 573

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
 Frame = +1

Query: 37  PLKVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIAR 201
           P K+R V+ V    I  E M ++PL +         +++  ET+ G     N    Q  +
Sbjct: 196 PPKIRTVFGVPKSLIFAEAMFSWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQ 255

Query: 202 DYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 381
            + T F+LDWS +D R+   + D    D ++S       Y PT   PT     +     R
Sbjct: 256 SFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTNPTCRTNPQ-----R 309

Query: 382 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIIDAMLEFGF 561
           + NL +++ T Y +       G  YRR   G+PSG++ TQ+ DSF N  +++  +   GF
Sbjct: 310 LQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALGF 369

[30][TOP]
>UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot
           associated partitivirus RepID=Q65A70_9VIRU
          Length = 621

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLETIRGS 174
           L T+  I K+D P K+R ++     +II + ML +     A+ +P    +++  ET  G 
Sbjct: 236 LHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYETFTGG 295

Query: 175 -NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPT 345
             R    +   Y   ++ +LDW  +D++    I D  + D + + +  ++GY PT +YP 
Sbjct: 296 WLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTKDYPD 354

Query: 346 YPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNL 525
                      R+  L  +    + +   +LP+G+ Y R   G+PSGL+ TQ +DS+ N 
Sbjct: 355 TKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGLFITQLIDSWYNY 414

Query: 526 FLIIDAMLEFGF 561
            ++   +   GF
Sbjct: 415 TMLATILSAMGF 426

[31][TOP]
>UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum
           cryptic virus 1 RepID=B7ZGY8_9VIRU
          Length = 587

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 64/192 (33%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
 Frame = +1

Query: 10  RNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT----IQARKPSCCIMYGLETIRGS- 174
           R+ I     P KVR VY    + I  + M  +PL     I  + P   +++G ET+ G  
Sbjct: 211 RSAIQPISDPNKVRFVYGYPKVGIFPQAMFFWPLFVYYHITGQSP---LLWGYETMTGGW 267

Query: 175 ---NRYIEQIARDYSTFFSLDWSSYD-QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYP 342
              N  +        +   LDW  +D   L  V  DI    +  S    +HGYQPT +Y 
Sbjct: 268 YRLNHELRSTPGISGSILELDWQGFDIHALFEVFDDIKNLSW--SFFDCSHGYQPTKDYQ 325

Query: 343 -TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFG 519
            T  D D      R+ NL  ++          LPDG  +RR+  GVPSGL+ TQ+LDS  
Sbjct: 326 GTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPSGLFITQWLDSVY 379

Query: 520 N---LFLIIDAM 546
           N   +F I+DAM
Sbjct: 380 NCIMIFTILDAM 391

[32][TOP]
>UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum
           partitivirus S RepID=C7ENF4_9VIRU
          Length = 580

 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 7/189 (3%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCC---IMYGLETIRG 171
           L  R H+   +   K+R V+ V  + ++ E M  +PL             +++G E ++G
Sbjct: 195 LHARAHVVGHEDADKIRAVFGVPKLLLMAENMFIWPLQAYYLNQDTTKHHLLWGNEIMKG 254

Query: 172 SNRYIE---QIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEY 339
             + +    Q  R   T  SLDWS +D+R L  VI D++     +S     H Y+PT  Y
Sbjct: 255 GWKKLWGQLQNGRISRTILSLDWSEFDKRALHEVIDDVH--SMWKSWFDFTH-YEPTIFY 311

Query: 340 PTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFG 519
                 + H+   R++NL  ++     +   L PDG  Y+ T  G+ SG   TQ LDSF 
Sbjct: 312 EKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGFQQTQLLDSFV 368

Query: 520 NLFLIIDAM 546
           N+ +++  +
Sbjct: 369 NMIMLLTVL 377

[33][TOP]
>UniRef100_Q6BE42 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-2 RepID=Q6BE42_9VIRU
          Length = 538

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 19/192 (9%)
 Frame = +1

Query: 43  KVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGSNRYI--EQIARD--Y 207
           KVR V+ V    I  E M  +PL +I     +  +++  E++ G    +  E  AR   Y
Sbjct: 154 KVRTVFGVPKYLIFAEAMFFWPLFSIYFTSANTPLLWNYESLNGGWHRLDSEYHARYTMY 213

Query: 208 STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEY-PTYPDLDE------H 366
           S  F+LDWS +D R       +Y+T +   +  ++  +     Y PT P LDE      H
Sbjct: 214 SPIFNLDWSEFDMR-------VYFTVWSDIIDRVSTYFCFCGRYCPTLPVLDEETGTQLH 266

Query: 367 KLY-------HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNL 525
             Y        R+ NL  ++   Y NM  +   G  ++R+  G+PSG++ TQ+ DSF N 
Sbjct: 267 PPYSEPFTNPQRLRNLWFWIRYAYFNMAAVTTTGKIFKRSFAGMPSGIFCTQFYDSFYNA 326

Query: 526 FLIIDAMLEFGF 561
            +I+  +L  G+
Sbjct: 327 VIIVTCLLALGY 338

[34][TOP]
>UniRef100_C1KDH6 Putative RNA-dependent RNA polymerase n=1 Tax=Heterobasidion
           insulare T-type partitivirus RepID=C1KDH6_9VIRU
          Length = 585

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 59/184 (32%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
 Frame = +1

Query: 43  KVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGSNRYIEQ---IARDYS 210
           K+R +Y V    I+ + M  +PL      + +  +++G ET  G    I     + R YS
Sbjct: 223 KIRVIYGVSKRHILAQAMFFWPLFRYYIEEHTSPLLWGNETFTGGMLKIHNLISVPRLYS 282

Query: 211 -TFFSLDWSSYDQR----LPRVITDIY--YTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 369
            T+ ++DWS +D R    + R I D +  Y DF          Y PT    TYPD     
Sbjct: 283 QTYLTVDWSGFDLRSLFTIQREIFDDWRTYFDFT--------AYIPTR---TYPDSKTDP 331

Query: 370 LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGNLFLIIDAML 549
           +  RM+ L ++       M F+LPD   Y R    +PSGL+ TQ+LDS  NL +I   + 
Sbjct: 332 I--RMERLWNWQRDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYNLIMIYTILS 389

Query: 550 EFGF 561
             GF
Sbjct: 390 AMGF 393

[35][TOP]
>UniRef100_B7X9J3 Putative RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes
           isometric virus RepID=B7X9J3_9VIRU
          Length = 587

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPS--CCIMYGLETIRGS 174
           L +R H+ K D P K+R V+ V  + +  E    +P+       S    +++G E + G 
Sbjct: 201 LRSRFHVVKADEPDKIRAVFGVPKLLLQAEQTFIWPMLSHYLDNSDRYPLLWGNEMMSGG 260

Query: 175 NRYIEQI---ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYP 342
            R + +     R  +T  SLDWS +D+R L  VI D++  D  RS    +  Y PT  YP
Sbjct: 261 WRKLNRTIYNGRTVNTVLSLDWSQFDKRALHEVIDDVH--DIWRSYFDFSF-YMPTSFYP 317

Query: 343 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDSFGN 522
             P  DE     R++NL  ++          L  G   +    G+ SG   TQ LDSF N
Sbjct: 318 NAP-TDE----SRLENLWEWMTYNIKKYPIRLSSGKLSQWRFNGIASGFQQTQLLDSFVN 372

Query: 523 LFLIIDAMLEFG 558
           + +I+  +   G
Sbjct: 373 MIMILTCLSRAG 384

[36][TOP]
>UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1
           Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU
          Length = 367

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 9/187 (4%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLETIRGS 174
           L  +  + K D P K+R ++ V  ++II E  + +     I+       +++G ET  G 
Sbjct: 5   LHIKTAVVKFDAPNKLRTIWGVSKLWIISEAQIYWEYIAWIKLNPGITPMLWGYETFTGG 64

Query: 175 NRYIEQIAR---DYSTFFSLDWSSYDQRLPR-VITDIYYTDFLRSLIVINHGYQPTYEYP 342
              + +      +  T+ ++DWS +D+R    +I  I+     R      +GY PT +YP
Sbjct: 65  WFRLYRTLHTPGENVTYITIDWSRFDKRAYFWLIRKIFIRT--RQFFDFENGYTPTKDYP 122

Query: 343 ---TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYNTQYLDS 513
              T+PD        ++  L  +    + +   +LP+G+ Y+R   G+PSGL+ TQ +DS
Sbjct: 123 FSPTHPD--------KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPSGLFITQLMDS 174

Query: 514 FGNLFLI 534
           + N  ++
Sbjct: 175 WYNYVML 181

[37][TOP]
>UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus
           partitivirus RepID=A2VA07_9VIRU
          Length = 132

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
 Frame = +1

Query: 1   LFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETIRG 171
           L +R+H+ + D P K+R V+ V  + +++E M  + +    +        +++G ETIRG
Sbjct: 10  LHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETIRG 69

Query: 172 S-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 330
              + I Q+ ++  S+  S DWS +D + L  VI D++  D  +S    N GY+P+
Sbjct: 70  GWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123