BB911253 ( RCE10342 )

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[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=UPI0000163E03
          Length = 824

 Score =  328 bits (840), Expect = 2e-88
 Identities = 151/193 (78%), Positives = 172/193 (89%)
 Frame = +1

Query: 1    RTWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPH 180
            RTWAFCE+FHS+QQTGML++DPA VLDHMSG+DFKKFMHVSEQGNKAHFYT +LGV GPH
Sbjct: 532  RTWAFCEAFHSAQQTGMLKYDPAKVLDHMSGLDFKKFMHVSEQGNKAHFYTEMLGVAGPH 591

Query: 181  YKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
            YKP E DFIVSTEPLKMGV GEHVPI+YG G+G LPTK WVL+FG+ S LKN  GYLI+P
Sbjct: 592  YKPQENDFIVSTEPLKMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHP 651

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQY 540
            +LR Q+EAGKR++FMSPAPYVANNAALIAFG+  K+L Q+DALVHYRN IPEST+GLEQY
Sbjct: 652  ILRAQIEAGKRLVFMSPAPYVANNAALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQY 711

Query: 541  FDAPIPQANVGQF 579
            FDAP+P A +G F
Sbjct: 712  FDAPLPTATIGTF 724

[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=POL1_BRSV
          Length = 2264

 Score =  328 bits (840), Expect = 2e-88
 Identities = 151/193 (78%), Positives = 172/193 (89%)
 Frame = +1

Query: 1    RTWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPH 180
            RTWAFCE+FHS+QQTGML++DPA VLDHMSG+DFKKFMHVSEQGNKAHFYT +LGV GPH
Sbjct: 1972 RTWAFCEAFHSAQQTGMLKYDPAKVLDHMSGLDFKKFMHVSEQGNKAHFYTEMLGVAGPH 2031

Query: 181  YKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
            YKP E DFIVSTEPLKMGV GEHVPI+YG G+G LPTK WVL+FG+ S LKN  GYLI+P
Sbjct: 2032 YKPQENDFIVSTEPLKMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHP 2091

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQY 540
            +LR Q+EAGKR++FMSPAPYVANNAALIAFG+  K+L Q+DALVHYRN IPEST+GLEQY
Sbjct: 2092 ILRAQIEAGKRLVFMSPAPYVANNAALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQY 2151

Query: 541  FDAPIPQANVGQF 579
            FDAP+P A +G F
Sbjct: 2152 FDAPLPTATIGTF 2164

[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
          Length = 824

 Score =  313 bits (802), Expect = 6e-84
 Identities = 150/193 (77%), Positives = 169/193 (87%)
 Frame = +1

Query: 1    RTWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPH 180
            RTWAFCE+FHS+QQTGM ++DPA VLDHMSGVDFK+FMH+SEQGNKAHFYT +LGV GPH
Sbjct: 532  RTWAFCEAFHSAQQTGMQKYDPAVVLDHMSGVDFKRFMHMSEQGNKAHFYTEMLGVSGPH 591

Query: 181  YKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
            YKP E DFIVS +PLK GV GE+VPI +G GIG LPTK WV +FGK S LKN+KGYLI  
Sbjct: 592  YKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITG 651

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQY 540
            LLREQ+EAGKR+IFM PAPYVANNAALI+FGSA K+L Q+DAL HYRN IPEST+GLEQY
Sbjct: 652  LLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQY 711

Query: 541  FDAPIPQANVGQF 579
            FDAPIPQA+VG F
Sbjct: 712  FDAPIPQASVGTF 724

[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
            RepID=POL1_TBRVM
          Length = 2266

 Score =  313 bits (802), Expect = 6e-84
 Identities = 150/193 (77%), Positives = 169/193 (87%)
 Frame = +1

Query: 1    RTWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPH 180
            RTWAFCE+FHS+QQTGM ++DPA VLDHMSGVDFK+FMH+SEQGNKAHFYT +LGV GPH
Sbjct: 1974 RTWAFCEAFHSAQQTGMQKYDPAVVLDHMSGVDFKRFMHMSEQGNKAHFYTEMLGVSGPH 2033

Query: 181  YKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
            YKP E DFIVS +PLK GV GE+VPI +G GIG LPTK WV +FGK S LKN+KGYLI  
Sbjct: 2034 YKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITG 2093

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQY 540
            LLREQ+EAGKR+IFM PAPYVANNAALI+FGSA K+L Q+DAL HYRN IPEST+GLEQY
Sbjct: 2094 LLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQY 2153

Query: 541  FDAPIPQANVGQF 579
            FDAPIPQA+VG F
Sbjct: 2154 FDAPIPQASVGTF 2166

[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=UPI00017F0C90
          Length = 826

 Score =  266 bits (680), Expect = 9e-70
 Identities = 123/192 (64%), Positives = 150/192 (78%)
 Frame = +1

Query: 1    RTWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPH 180
            RTWAFCE+FHS+QQTGMLRHDPA +LD ++G +F +FM  S +G+KAHFYT +LGVCGPH
Sbjct: 531  RTWAFCEAFHSAQQTGMLRHDPAKILDSLAGPEFPRFMRCSGEGDKAHFYTPILGVCGPH 590

Query: 181  YKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
            YKP E+DF+VST P+K G  G H+PIK GGG+G LPT  WV NFG+ S LKN  GY  Y 
Sbjct: 591  YKPKEQDFLVSTLPIKQGE-GVHIPIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYK 649

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQY 540
            LL EQ+E GKR++FMS APYVA NAALI+FGS+ K+L ++  L HYRN IPES  GL  Y
Sbjct: 650  LLCEQIEQGKRLVFMSAAPYVAGNAALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGY 709

Query: 541  FDAPIPQANVGQ 576
            FDAP+P A +G+
Sbjct: 710  FDAPLPAATIGK 721

[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=POL1_GCMV
          Length = 2252

 Score =  266 bits (680), Expect = 9e-70
 Identities = 123/192 (64%), Positives = 150/192 (78%)
 Frame = +1

Query: 1    RTWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPH 180
            RTWAFCE+FHS+QQTGMLRHDPA +LD ++G +F +FM  S +G+KAHFYT +LGVCGPH
Sbjct: 1957 RTWAFCEAFHSAQQTGMLRHDPAKILDSLAGPEFPRFMRCSGEGDKAHFYTPILGVCGPH 2016

Query: 181  YKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
            YKP E+DF+VST P+K G  G H+PIK GGG+G LPT  WV NFG+ S LKN  GY  Y 
Sbjct: 2017 YKPKEQDFLVSTLPIKQGE-GVHIPIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYK 2075

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQY 540
            LL EQ+E GKR++FMS APYVA NAALI+FGS+ K+L ++  L HYRN IPES  GL  Y
Sbjct: 2076 LLCEQIEQGKRLVFMSAAPYVAGNAALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGY 2135

Query: 541  FDAPIPQANVGQ 576
            FDAP+P A +G+
Sbjct: 2136 FDAPLPAATIGK 2147

[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=UPI00003FE52F
          Length = 846

 Score =  193 bits (490), Expect = 9e-48
 Identities = 100/189 (52%), Positives = 125/189 (66%)
 Frame = +1

Query: 4    TWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHY 183
            TWA  E+FH S+QTGM  + PA  +D   G +F +FMH S+ GN+ HF    L V GP Y
Sbjct: 540  TWADREAFHMSKQTGMEAYQPAKEIDLDVGQEFARFMHTSDIGNQVHFTRQCLVVAGPFY 599

Query: 184  KPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYPL 363
            KP  +  +VST PLK G  G  VP++ G GIG LPT  WV  F + + L +A GY I+  
Sbjct: 600  KPTPDQLLVSTTPLKQGESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGN 659

Query: 364  LREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQYF 543
            +R  +E+GK ++F S APYVA NAAL+AFG A KLL  + AL  YRN IPEST GLEQYF
Sbjct: 660  VRSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPESTYGLEQYF 719

Query: 544  DAPIPQANV 570
            DA IPQA++
Sbjct: 720  DAAIPQASL 728

[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=POL1_CNSV
          Length = 2336

 Score =  193 bits (490), Expect = 9e-48
 Identities = 100/189 (52%), Positives = 125/189 (66%)
 Frame = +1

Query: 4    TWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHY 183
            TWA  E+FH S+QTGM  + PA  +D   G +F +FMH S+ GN+ HF    L V GP Y
Sbjct: 2030 TWADREAFHMSKQTGMEAYQPAKEIDLDVGQEFARFMHTSDIGNQVHFTRQCLVVAGPFY 2089

Query: 184  KPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYPL 363
            KP  +  +VST PLK G  G  VP++ G GIG LPT  WV  F + + L +A GY I+  
Sbjct: 2090 KPTPDQLLVSTTPLKQGESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGN 2149

Query: 364  LREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTTGLEQYF 543
            +R  +E+GK ++F S APYVA NAAL+AFG A KLL  + AL  YRN IPEST GLEQYF
Sbjct: 2150 VRSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPESTYGLEQYF 2209

Query: 544  DAPIPQANV 570
            DA IPQA++
Sbjct: 2210 DAAIPQASL 2218

[9][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
            RepID=A2ID54_9SECO
          Length = 1916

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 6/186 (3%)
 Frame = +1

Query: 4    TWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAH--FYTSVLGVCGP 177
            TW     FH +QQ G + + P + ++ +  +   K M ++  G + H  +    + V GP
Sbjct: 1713 TWDQARCFHEAQQHGAMPYRPQASMELLVDMHTDKKM-MANHGEQDHLIYVQPRIAVSGP 1771

Query: 178  HY--KPCEEDFIVSTEPLKMG--VLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKG 345
             +  + C++ F+VST PL       G H+P++ G G+GR+P+++WV  F +   +++ + 
Sbjct: 1772 KWIIESCDKQFVVSTLPLSRAEKFSGIHIPVECGDGLGRMPSQDWVRRFRR---IRHVQI 1828

Query: 346  YLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCIPESTT 525
             +IY    +   AGK IIF   APY+A   A I+F  A +  + RD L  Y N    +++
Sbjct: 1829 RVIY----DAYAAGKTIIFKDVAPYIAGWTAAISFACAQQ-YSYRDMLNRYNNVCTPNSS 1883

Query: 526  GLEQYF 543
            G+EQYF
Sbjct: 1884 GIEQYF 1889

[10][TOP]
>UniRef100_B4YNP7 Polyprotein 1 n=1 Tax=Arabis mosaic virus RepID=B4YNP7_ARMV
          Length = 2285

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 2/182 (1%)
 Frame = +1

Query: 4    TWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHY 183
            TW   ++FH  Q +G     P  +++   GV F  F+       + H     L + G  Y
Sbjct: 1971 TWYQAQTFHECQLSGESNWKPQGLIEISHGVGFASFVQQDGTELERHDICPGLAISGARY 2030

Query: 184  KPCEEDFIVSTEPLKMGVLGEH-VPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
               +E+ ++S   L  G +  H + +K G GIGRLP+        K+S L      ++  
Sbjct: 2031 IAKKEEILMSLSSLLPGDVNAHKLELKCGDGIGRLPS--------KASVLAQRNPGIVMR 2082

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCI-PESTTGLEQ 537
            L ++ LE  K ++     PY+   A     G +    + R  L  Y N + P+   GL  
Sbjct: 2083 LCKQALEEKKTLVIRDERPYIGGWAMACICGESFG-FSIRSTLALYANLLGPDRKNGLAG 2141

Query: 538  YF 543
            YF
Sbjct: 2142 YF 2143

[11][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
           RepID=UPI0000163DCE
          Length = 707

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
 Frame = +1

Query: 4   TWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSV---LGVCG 174
           +W    +FH  Q +G+    P  + D    VD  +   +     +A F T +   + +CG
Sbjct: 508 SWREAFAFHQGQISGVTPWTPYQMFD--VPVDGGRLRAMMANQGEAAFSTHLGREIYICG 565

Query: 175 PHY--KPCEEDFIVSTEPLKMGVLGE--HVPIKYG-GGIGRLPTKNWVLNFGKSSSLKNA 339
           P +     E  F+VST PL+    G   H  I+Y   G+GRLP+++WV  F  S+    A
Sbjct: 566 PKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHRVTA 625

Query: 340 KGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAF 450
           +       +R+   +GK I F    PYVAN  A I F
Sbjct: 626 E-------IRKAHASGKAIYFRDDPPYVANWCAAIGF 655

[12][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
            RepID=POL1_BRAV
          Length = 2094

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
 Frame = +1

Query: 4    TWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSV---LGVCG 174
            +W    +FH  Q +G+    P  + D    VD  +   +     +A F T +   + +CG
Sbjct: 1895 SWREAFAFHQGQISGVTPWTPYQMFD--VPVDGGRLRAMMANQGEAAFSTHLGREIYICG 1952

Query: 175  PHY--KPCEEDFIVSTEPLKMGVLGE--HVPIKYG-GGIGRLPTKNWVLNFGKSSSLKNA 339
            P +     E  F+VST PL+    G   H  I+Y   G+GRLP+++WV  F  S+    A
Sbjct: 1953 PKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHRVTA 2012

Query: 340  KGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAF 450
            +       +R+   +GK I F    PYVAN  A I F
Sbjct: 2013 E-------IRKAHASGKAIYFRDDPPYVANWCAAIGF 2042

[13][TOP]
>UniRef100_UPI00003FE537 RNA-dependent RNA polymerase n=1 Tax=Arabis mosaic virus
            RepID=UPI00003FE537
          Length = 825

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 5/189 (2%)
 Frame = +1

Query: 4    TWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHY 183
            TW   + FH  Q +G     P  +++   G  F  F+  +    + H     L + G  Y
Sbjct: 510  TWYEAQIFHECQLSGESGWKPQGLIEVSHGASFASFVQQNGTELERHDICPGLAISGSKY 569

Query: 184  KPCEEDFIVSTEPLKMG-VLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
               EE+ ++S   L  G +    + +K G GIGRLP+        K+S L   K  ++  
Sbjct: 570  IAREEEILMSLSSLLPGDINAVKLTLKCGDGIGRLPS--------KASVLSQRKPGIVMQ 621

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCI-PESTTGLEQ 537
            L    ++  K ++     PY+   A     G +    + +D L  Y N + P    GL  
Sbjct: 622  LCARAIKEKKTLVIRDERPYIGGWAMACICGESFG-FSIKDTLALYANLMGPNRKNGLAT 680

Query: 538  Y---FDAPI 555
            Y   FD+P+
Sbjct: 681  YFTDFDSPV 689

[14][TOP]
>UniRef100_P29149 RNA-directed RNA polymerase n=1 Tax=Grapevine fanleaf virus
            RepID=POL1_GFLV
          Length = 2284

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 46/182 (25%), Positives = 72/182 (39%), Gaps = 2/182 (1%)
 Frame = +1

Query: 4    TWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHY 183
            TW   ESFH  Q++G   + P  +++   G  F  F   +    + H     L + G  Y
Sbjct: 1970 TWFQAESFHECQKSGESGYKPQGLIEISHGAAFASFTQQAGTELEKHDICPGLSIAGTKY 2029

Query: 184  KPCEEDFIVSTEPLKMGVLGE-HVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
               E + ++S   +  G      + +  G GIGRLP+K  +LN  K          L+  
Sbjct: 2030 IATENEIVLSLSSVLPGDRNVFKLDLPCGDGIGRLPSKCSILNLRKPG--------LVMR 2081

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCI-PESTTGLEQ 537
            L +   +  K ++     PY+   A     G +     Q+  L  Y N + P    GL  
Sbjct: 2082 LCKRAQDEKKTLVIRDERPYIGAWAVACICGESFG-FGQQSVLALYANLLGPNQRNGLAS 2140

Query: 538  YF 543
            YF
Sbjct: 2141 YF 2142

[15][TOP]
>UniRef100_Q6W8W5 RNA-directed RNA polymerase n=1 Tax=Arabis mosaic virus strain NW
            RepID=POL1_ARMVN
          Length = 2284

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 5/189 (2%)
 Frame = +1

Query: 4    TWAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHY 183
            TW   + FH  Q +G     P  +++   G  F  F+  +    + H     L + G  Y
Sbjct: 1969 TWYEAQIFHECQLSGESGWKPQGLIEVSHGASFASFVQQNGTELERHDICPGLAISGSKY 2028

Query: 184  KPCEEDFIVSTEPLKMG-VLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
               EE+ ++S   L  G +    + +K G GIGRLP+        K+S L   K  ++  
Sbjct: 2029 IAREEEILMSLSSLLPGDINAVKLTLKCGDGIGRLPS--------KASVLSQRKPGIVMQ 2080

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCI-PESTTGLEQ 537
            L    ++  K ++     PY+   A     G +    + +D L  Y N + P    GL  
Sbjct: 2081 LCARAIKEKKTLVIRDERPYIGGWAMACICGESFG-FSIKDTLALYANLMGPNRKNGLAT 2139

Query: 538  Y---FDAPI 555
            Y   FD+P+
Sbjct: 2140 YFTDFDSPV 2148

[16][TOP]
>UniRef100_UPI00003FE53F RNA-dependent RNA polymerase n=1 Tax=Tomato ringspot virus
           RepID=UPI00003FE53F
          Length = 711

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
 Frame = +1

Query: 7   WAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYK 186
           W  C SFH  Q +      P   L+    V   KF+               L V GP ++
Sbjct: 519 WRHCASFHDEQYSQWKPWSPVKFLE--VDVPDAKFLQHKAPATALSIVADRLAVAGPGWR 576

Query: 187 PCEED--FIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
             + D   +VS   LK    G + P+ YG G G+  T+  +  + +   LK+ +      
Sbjct: 577 NKDPDRYLLVSLTSLKANEGGLYFPVDYGEGTGQQATEASIRAYRR---LKDHR----VR 629

Query: 361 LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHY 498
            +R+    GK I+F    P+V+  AA I+FG++   +N +D L++Y
Sbjct: 630 HMRDSWNEGKTIVFRCEGPFVSGWAAAISFGTSVG-MNAQDLLINY 674

[17][TOP]
>UniRef100_Q9QRA7 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA7_9SECO
          Length = 985

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
 Frame = +1

Query: 7    WAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYK 186
            W  C SFH  Q +      P   L+    V   KF+               L V GP ++
Sbjct: 793  WRHCASFHDEQYSQWKPWSPVKFLE--VDVPDAKFLQHKAPATALSIVADRLAVAGPGWR 850

Query: 187  PCEED--FIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
              + D   +VS   LK    G + P+ YG G G+  T+  +  + +   LK+ +      
Sbjct: 851  NKDPDRYLLVSLTSLKANEGGLYFPVDYGEGTGQQATEASIRAYRR---LKDHR----VR 903

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHY 498
             +R+    GK I+F    P+V+  AA I+FG++   +N +D L++Y
Sbjct: 904  HMRDSWNEGKTIVFRCEGPFVSGWAAAISFGTSVG-MNAQDLLINY 948

[18][TOP]
>UniRef100_P29150 RNA-directed RNA polymerase n=1 Tax=Tomato ringspot virus (ISOLATE
            RASPBERRY) RepID=POL1_TORVR
          Length = 2197

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
 Frame = +1

Query: 7    WAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYK 186
            W  C SFH  Q +      P   L+    V   KF+               L V GP ++
Sbjct: 2005 WRHCASFHDEQYSQWKPWSPVKFLE--VDVPDAKFLQHKAPATALSIVADRLAVAGPGWR 2062

Query: 187  PCEED--FIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
              + D   +VS   LK    G + P+ YG G G+  T+  +  + +   LK+ +      
Sbjct: 2063 NKDPDRYLLVSLTSLKANEGGLYFPVDYGEGTGQQATEASIRAYRR---LKDHR----VR 2115

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHY 498
             +R+    GK I+F    P+V+  AA I+FG++   +N +D L++Y
Sbjct: 2116 HMRDSWNEGKTIVFRCEGPFVSGWAAAISFGTSVG-MNAQDLLINY 2160

[19][TOP]
>UniRef100_Q9QRA8 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA8_9SECO
          Length = 985

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
 Frame = +1

Query: 7    WAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYK 186
            W  C SFH  Q +      P   L+    V   KF+               L V GP ++
Sbjct: 793  WRHCASFHDEQYSQWKPWSPVKFLE--VDVPDAKFLQHKAPATALSIVADRLAVAGPGWR 850

Query: 187  PCEED--FIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
              + D   +VS   LK    G + P+ YG G G+  T+  +  + +   LK+ +      
Sbjct: 851  NKDPDRYLLVSLTSLKANEGGLYFPVDYGEGTGQQATEASIRAYRR---LKDHR----VR 903

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHY 498
             +R+    GK ++F    P+V+  AA I+FG++   +N +D L++Y
Sbjct: 904  HMRDSWNEGKTVVFRCEGPFVSGWAAAISFGTSVG-MNAQDLLINY 948

[20][TOP]
>UniRef100_Q9QRA6 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA6_9SECO
          Length = 985

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
 Frame = +1

Query: 7    WAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYK 186
            W  C SFH  Q +      P   L+    V   KF+               L V GP ++
Sbjct: 793  WRHCASFHDEQYSQWKPWSPVKFLE--VDVPDAKFLQHKAPATALSIVLDRLAVAGPGWR 850

Query: 187  PCEED--FIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
              + D   +VS   LK    G + P+ YG G G+  T+  +  + +   LK+ +      
Sbjct: 851  NKDPDRYLLVSLTSLKANEGGLYFPVDYGEGTGQQATEASIRAYRR---LKDHR----VR 903

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHY 498
             +R+    GK ++F    P+V+  AA I+FG++   +N +D L++Y
Sbjct: 904  HMRDSWNEGKTVVFRCEGPFVSGWAAAISFGTSVG-MNAQDLLINY 948

[21][TOP]
>UniRef100_Q155U1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato ringspot
           virus RepID=Q155U1_9SECO
          Length = 711

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
 Frame = +1

Query: 7   WAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYK 186
           W  C SFH  Q +      P   L+    V   KF+               L V GP ++
Sbjct: 519 WRHCASFHDEQYSQWKPWSPVKFLE--VDVPDVKFLQHKAPATALSIVADRLAVAGPGWR 576

Query: 187 PCEED--FIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
             + D   +VS   LK    G + P+ YG G G+  T+  +  + +   LK+ +      
Sbjct: 577 NKDPDKYLLVSLTSLKANEGGLYFPVDYGEGTGQQATEASIRAYRR---LKDHR----VR 629

Query: 361 LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHY 498
            +R+    GK I+F    P+V+  AA I+FG++   +N +D L++Y
Sbjct: 630 HMRDSWNEGKTIVFRCEGPFVSGWAAAISFGASIG-MNAQDLLINY 674

[22][TOP]
>UniRef100_Q9QRA9 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA9_9SECO
          Length = 985

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 2/166 (1%)
 Frame = +1

Query: 7    WAFCESFHSSQQTGMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYK 186
            W  C +FH  Q +      P   L+    V   KF+               L V GP ++
Sbjct: 793  WRHCAAFHDEQYSQWKPWAPVKFLE--VDVPDVKFLQHKAPSTALSIVADRLAVAGPGWR 850

Query: 187  PCEED--FIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLNFGKSSSLKNAKGYLIYP 360
              + D   +VS   LK    G + P+ YG G+G+  T+  +  + K    +         
Sbjct: 851  NKDPDKYLLVSLTSLKANEGGLYFPVDYGEGVGQQATEASIFAYRKYKDHRVRH------ 904

Query: 361  LLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHY 498
             +R+    GK I+F    P+V+  AA I+FG+ T  +N +D L +Y
Sbjct: 905  -MRDSWNEGKTIVFRCEGPFVSGWAAAISFGT-TVGMNAQDLLRNY 948