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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
virus China/Mar2007 RepID=A8W7G1_9VIRU
Length = 723
Score = 332 bits (852), Expect = 1e-89
Identities = 156/195 (80%), Positives = 170/195 (87%)
Frame = +3
Query: 3 IDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 182
ID RK+ +L H+ KFLD KPYLP+HFVDTQYCKTPLVTGTGYHNRYSFKQ+AHAKYSHP
Sbjct: 183 IDEDRKQQILKHLFKFLDVKPYLPIHFVDTQYCKTPLVTGTGYHNRYSFKQRAHAKYSHP 242
Query: 183 PEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANS 362
EYA K SKGYFYNATYENARTL+H IK YGLPFN+ A K++LTD + YI +AN
Sbjct: 243 EEYALKSTSKGYFYNATYENARTLVHLIKTYGLPFNMQFACPKSDLTDEQINLYISKANQ 302
Query: 363 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 542
FFNDYPTLLFTRNHISKR G LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL
Sbjct: 303 FFNDYPTLLFTRNHISKRSGTLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 362
Query: 543 ETIRGSNRYIEQIAR 587
ETIRGSN YI+++AR
Sbjct: 363 ETIRGSNHYIDRLAR 377
[2][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
virus 717 RepID=Q9Q9X2_9VIRU
Length = 730
Score = 223 bits (567), Expect = 1e-56
Identities = 105/194 (54%), Positives = 134/194 (69%)
Frame = +3
Query: 6 DPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHPP 185
D R N++ IH+F++ PY+PLHFVDT YCK PLVTGTGYHNR+S+ +++ A + HP
Sbjct: 207 DALRLSNIMDLIHEFMNITPYMPLHFVDTFYCKLPLVTGTGYHNRHSYFRRSFAHFCHPE 266
Query: 186 EYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSF 365
YA KP SKGYF+NAT R L+H IK G PF+ D+ + F
Sbjct: 267 LYAEKPTSKGYFFNATKHENRFLVHKIKHSGYPFDFTSDSDRN-----------SKMADF 315
Query: 366 FNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLE 545
+PT++FTRNHISKRDG LKVRPVYAVD++F+ +E ML FP T+QARKP CCIMYGLE
Sbjct: 316 LKSFPTMMFTRNHISKRDGTLKVRPVYAVDELFLDLECMLAFPATVQARKPECCIMYGLE 375
Query: 546 TIRGSNRYIEQIAR 587
TIRGSN ++ +A+
Sbjct: 376 TIRGSNIKLDSLAQ 389
[3][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
RepID=Q9YX75_9VIRU
Length = 673
Score = 216 bits (551), Expect = 8e-55
Identities = 109/194 (56%), Positives = 133/194 (68%)
Frame = +3
Query: 3 IDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 182
++P R +V++H+ K + PYLPLHFVDTQY K PL GTGYHNR S + HA +SHP
Sbjct: 176 VEPTRINHVMSHVMKKMAITPYLPLHFVDTQYDKRPLANGTGYHNRRSHEMNIHALFSHP 235
Query: 183 PEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANS 362
EY +K SKGY+ NA E+AR+LIH+IK YG PF +D L +
Sbjct: 236 KEYESKRTSKGYYVNAFLESARSLIHWIKLYGNPFRHCPSDLAQSLRE------------ 283
Query: 363 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 542
FF PT+LFTRNHIS RDG LK RPVYAVDD+F+ IE MLTFP + ARKP CCIMYGL
Sbjct: 284 FFLQRPTMLFTRNHISDRDGILKQRPVYAVDDLFLTIESMLTFPAHVIARKPECCIMYGL 343
Query: 543 ETIRGSNRYIEQIA 584
ETIRGSN+ +++IA
Sbjct: 344 ETIRGSNQILDKIA 357
[4][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-1 RepID=Q6BE43_9VIRU
Length = 706
Score = 216 bits (549), Expect = 1e-54
Identities = 104/195 (53%), Positives = 130/195 (66%)
Frame = +3
Query: 3 IDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 182
+DP+RK VL FL PYLP+HFVD Y K PL TGTGY NR+S+ +AHA ++HP
Sbjct: 177 LDPERKRTVLTLCKHFLACVPYLPIHFVDFMYAKLPLHTGTGYFNRFSYDAQAHASFAHP 236
Query: 183 PEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANS 362
+Y + SKGY+ N T + ART++H +K++ LPFN D D
Sbjct: 237 EQYHDRHTSKGYYINTTMQYARTIVHRLKQFALPFNP---------KDFDSSSIFSRMRF 287
Query: 363 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 542
FF PT+LFTRNHIS RDG LK RPVYAVDD+F+I+E+MLTFPL + AR P CCIMYGL
Sbjct: 288 FFLTRPTMLFTRNHISDRDGNLKQRPVYAVDDLFLILEVMLTFPLLVMARLPECCIMYGL 347
Query: 543 ETIRGSNRYIEQIAR 587
ETIRGSN +I+ A+
Sbjct: 348 ETIRGSNHWIDSTAK 362
[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=D0EIN9_9VIRU
Length = 502
Score = 191 bits (484), Expect = 5e-47
Identities = 99/194 (51%), Positives = 123/194 (63%)
Frame = +3
Query: 3 IDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 182
I RK+ +L + FL P+LPLHF+D+ + KTPL TGTGY NR+SF + HA +S P
Sbjct: 178 IPEDRKQRILNQVISFLACTPFLPLHFIDSLWDKTPLHTGTGYFNRHSFAARIHAMFSAP 237
Query: 183 PEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANS 362
Y + SKGYF N E AR+ IH IK +G PF+ + DK D S
Sbjct: 238 KLYERRTTSKGYFINYFLETARSTIHSIKLHGYPFDPSKVPDKG-----------DALRS 286
Query: 363 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 542
F P +LFTRNHIS RDG LK RPVYA+DD+FI +E +TFPL + ARK CCIMYG
Sbjct: 287 FILKRPVMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESKITFPLHVMARKIECCIMYGY 346
Query: 543 ETIRGSNRYIEQIA 584
ETIRGSNR I+++A
Sbjct: 347 ETIRGSNRQIDKLA 360
[6][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
RepID=Q5GHF1_9VIRU
Length = 706
Score = 189 bits (481), Expect = 1e-46
Identities = 101/194 (52%), Positives = 123/194 (63%)
Frame = +3
Query: 3 IDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 182
I RK+ +L + FL P+LPLHF+D+ + KTPL TGTGY NR+SF + HA +S P
Sbjct: 178 IPEARKQRILDLVISFLACTPFLPLHFIDSLWDKTPLHTGTGYFNRHSFAARIHAMFSAP 237
Query: 183 PEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANS 362
Y + SKGYF N E AR+ IH IK +G PF+ S V S
Sbjct: 238 RLYERRTTSKGYFINYFLETARSTIHNIKLHGFPFD-----------PSKVPDLGSALRS 286
Query: 363 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 542
F PT+LFTRNHIS RDG LK RPVYA+DD+FI +E M+TFPL + ARK CCIMYG
Sbjct: 287 FILKRPTMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESMITFPLHVMARKIECCIMYGY 346
Query: 543 ETIRGSNRYIEQIA 584
ETIRGSNR I++IA
Sbjct: 347 ETIRGSNRQIDKIA 360
[7][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
partitivirus 1-W8 RepID=Q50LH7_9VIRU
Length = 709
Score = 187 bits (475), Expect = 5e-46
Identities = 99/199 (49%), Positives = 123/199 (61%), Gaps = 4/199 (2%)
Frame = +3
Query: 3 IDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 182
ID RK VL + FL+ P+LP+HFVDT++C TP T TGY R+S + HA Y+
Sbjct: 178 IDETRKNMVLPLVIYFLNALPFLPIHFVDTRFCGTPKHTATGYFQRFSTFFRTHAYYARN 237
Query: 183 PEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANS 362
YA +P SKGYF+N YE +RT +H IKE+G PF + D +
Sbjct: 238 KLYALRPTSKGYFFNTVYEFSRTWMHHIKEHGYPF----------VPSHDALDNARQYRI 287
Query: 363 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKP----SCCI 530
F + T+LFTRNHIS RDG LK RPVYAVDD FI+ ELM++FPL + AR P CI
Sbjct: 288 FMQKHVTMLFTRNHISDRDGFLKQRPVYAVDDFFILCELMISFPLHVMARYPINGIKSCI 347
Query: 531 MYGLETIRGSNRYIEQIAR 587
MY ETIRGSNRY++ IAR
Sbjct: 348 MYSFETIRGSNRYLDSIAR 366
[8][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
hypoxylon virus RepID=Q85055_AHV
Length = 665
Score = 140 bits (353), Expect = 7e-32
Identities = 85/191 (44%), Positives = 110/191 (57%)
Frame = +3
Query: 12 QRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHPPEY 191
+R+ +L I FL KPY +H+ DT++ L T Y + +S +KAHA SHP ++
Sbjct: 143 ERERRLLPLIDHFLGIKPYDIVHYCDTRFYPWKLSTRADYFHNHSRDRKAHAAKSHP-DF 201
Query: 192 ATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFN 371
AT P K YF N+ R+ +H IKEYG PF TDS + + + +F
Sbjct: 202 ATGPTKKSYFINSHLFFDRSTVHNIKEYGFPFR--------PTTDSARNETL--LDLWFK 251
Query: 372 DYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETI 551
PT L R+HISKRD LKVRPVY I+I IE ML +PL QARK CCIMYGLETI
Sbjct: 252 KVPTELLVRSHISKRDN-LKVRPVYNAPMIYIRIECMLFYPLLAQARKRDCCIMYGLETI 310
Query: 552 RGSNRYIEQIA 584
RG +E+I+
Sbjct: 311 RGGMNELERIS 321
[9][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6X9T6_9VIRU
Length = 663
Score = 116 bits (291), Expect = 1e-24
Identities = 74/190 (38%), Positives = 99/190 (52%)
Frame = +3
Query: 15 RKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHPPEYA 194
RK+ +L ++ F+ KPY +HF DT++ L Y + +S +K HA+ SH A
Sbjct: 148 RKQRILNLVNHFMGVKPYDIVHFCDTRFYPWDLSKKADYFHNHSNARKRHAQTSHAST-A 206
Query: 195 TKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFND 374
T P K +F NA + R+ +H IK YGLPF + + ++ +F
Sbjct: 207 TGPTKKSWFINAHLFHDRSTVHNIKLYGLPFKPHSYEARNKIL----------LELWFKK 256
Query: 375 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIR 554
PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGLETIR
Sbjct: 257 IPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIR 315
Query: 555 GSNRYIEQIA 584
G IE +A
Sbjct: 316 GGMMEIESLA 325
[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
1 RepID=Q5DM90_9VIRU
Length = 663
Score = 115 bits (289), Expect = 2e-24
Identities = 74/190 (38%), Positives = 98/190 (51%)
Frame = +3
Query: 15 RKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHPPEYA 194
RK+ +L ++ F+ KPY +HF DT++ L Y + +S +K HA+ SH A
Sbjct: 148 RKQKILKLVNHFMGVKPYDIVHFCDTRFYPWDLSKKADYFHNHSNARKRHAQTSHAST-A 206
Query: 195 TKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFND 374
T P K +F NA + R+ +H IK YGLPF + ++ +F
Sbjct: 207 TGPTKKSWFINAHLFHDRSTVHNIKLYGLPFKPHSYAARNKILQE----------LWFKK 256
Query: 375 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIR 554
PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGLETIR
Sbjct: 257 IPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIR 315
Query: 555 GSNRYIEQIA 584
G IE +A
Sbjct: 316 GGMMEIESLA 325
[11][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6EM35_9VIRU
Length = 663
Score = 114 bits (286), Expect = 4e-24
Identities = 76/192 (39%), Positives = 101/192 (52%), Gaps = 2/192 (1%)
Frame = +3
Query: 15 RKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHPPEYA 194
RK+ +L ++ F+ KPY +HF DT++ L Y + +S +K HA+ SH A
Sbjct: 148 RKQKILNLVNHFMGVKPYDIVHFCDTRFYPWDLSKKADYFHNHSNARKRHAQTSHAST-A 206
Query: 195 TKPISKGYFYNATYENARTLIHFIKEYGLPF--NIIQADDKTELTDSDVQKYIDEANSFF 368
T P K +F NA + R+ +H IK YGLPF + +A ++T L +F
Sbjct: 207 TGPTKKSWFINAHLFHDRSTVHNIKLYGLPFKPHSYKARNQTLL------------ELWF 254
Query: 369 NDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLET 548
PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYG ET
Sbjct: 255 KKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGFET 313
Query: 549 IRGSNRYIEQIA 584
IRG IE +A
Sbjct: 314 IRGGMMEIESLA 325
[12][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
annosum P-type partitivirus RepID=Q8QY51_9VIRU
Length = 734
Score = 97.1 bits (240), Expect = 9e-19
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Frame = +3
Query: 3 IDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYS--FKQKAHAKYS 176
+ QR ++ I FL P+ P++F D ++ K LVT YH +S + ++ ++
Sbjct: 153 VTSQRLNEIMILIFHFLPIVPHPPVNFPDLRFYKWSLVTSADYHAHHSSDMQNESTRYWT 212
Query: 177 HPPE---------YATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKTELTDS 329
H + Y+ P SKG+F+N+ R ++H IK G P ++ KT
Sbjct: 213 HLRDTSQLEDRFDYSKNPRSKGFFFNSLLLRCRRIVHNIKYTGWPIPHDPSESKTSFLQR 272
Query: 330 DVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQA 509
+ Y N PT+++ R+ ISK LKVRPVY +F+++E MLT L Q
Sbjct: 273 ML--YWTLMN------PTVMYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQC 323
Query: 510 RKPSCCIMYGLETIRGSNRYIEQIA 584
RKP CI++ ETIRG + +I+
Sbjct: 324 RKPDNCILWSYETIRGGMHELHRIS 348
[13][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=B2L075_9VIRU
Length = 185
Score = 63.2 bits (152), Expect = 1e-08
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +3
Query: 456 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIA 584
D+FI +E M+TFPL + ARK CCIMYG ETIRGSNR I+++A
Sbjct: 1 DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLA 43