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[1][TOP] >UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides virus China/Mar2007 RepID=A8W7G1_9VIRU Length = 723 Score = 351 bits (900), Expect = 3e-95 Identities = 166/191 (86%), Positives = 175/191 (91%) Frame = +2 Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184 IK YGLPFN+ A K++LTD + YI +AN FFNDYPTLLFTRNHISKR G LKVRPV Sbjct: 270 IKTYGLPFNMQFACPKSDLTDEQINLYISKANQFFNDYPTLLFTRNHISKRSGTLKVRPV 329 Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSN YI+++AR YSTFFSLDWSS Sbjct: 330 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNHYIDRLARPYSTFFSLDWSS 389 Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWY Sbjct: 390 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWY 449 Query: 545 NNMTFLLPDGY 577 NNMTFLLPDGY Sbjct: 450 NNMTFLLPDGY 460 [2][TOP] >UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix partitivirus 1-W8 RepID=Q50LH7_9VIRU Length = 709 Score = 248 bits (634), Expect = 2e-64 Identities = 120/195 (61%), Positives = 142/195 (72%), Gaps = 4/195 (2%) Frame = +2 Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184 IKE+G PF + D + F + T+LFTRNHIS RDG LK RPV Sbjct: 265 IKEHGYPF----------VPSHDALDNARQYRIFMQKHVTMLFTRNHISDRDGFLKQRPV 314 Query: 185 YAVDDIFIIIELMLTFPLTIQARKP----SCCIMYGLETIRGSNRYIEQIARDYSTFFSL 352 YAVDD FI+ ELM++FPL + AR P CIMY ETIRGSNRY++ IARD+ +FF++ Sbjct: 315 YAVDDFFILCELMISFPLHVMARYPINGIKSCIMYSFETIRGSNRYLDSIARDFISFFTI 374 Query: 353 DWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFL 532 DWSS+DQR+PRVITDI++TDFLR LIVINHGYQPTYEYP YPDL EH LY RM+NLLHFL Sbjct: 375 DWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQPTYEYPAYPDLSEHDLYKRMNNLLHFL 434 Query: 533 HTWYNNMTFLLPDGY 577 HTWYNNM F+ DG+ Sbjct: 435 HTWYNNMVFVTADGF 449 [3][TOP] >UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa partitivirus V1-1 RepID=Q6BE43_9VIRU Length = 706 Score = 241 bits (614), Expect = 4e-62 Identities = 112/191 (58%), Positives = 137/191 (71%) Frame = +2 Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184 +K++ LPFN D D FF PT+LFTRNHIS RDG LK RPV Sbjct: 264 LKQFALPFNP---------KDFDSSSIFSRMRFFFLTRPTMLFTRNHISDRDGNLKQRPV 314 Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364 YAVDD+F+I+E+MLTFPL + AR P CCIMYGLETIRGSN +I+ A+ + ++F++DWS Sbjct: 315 YAVDDLFLILEVMLTFPLLVMARLPECCIMYGLETIRGSNHWIDSTAKRFRSYFTIDWSQ 374 Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544 YDQRLPR ITD+YYTDFL SLI+IN GYQPT +Y YPDL ++ RM NLLHFLHTWY Sbjct: 375 YDQRLPRCITDLYYTDFLESLIIINFGYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWY 434 Query: 545 NNMTFLLPDGY 577 NNM ++ DG+ Sbjct: 435 NNMVYVTADGF 445 [4][TOP] >UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1 RepID=Q5GHF1_9VIRU Length = 706 Score = 235 bits (599), Expect = 2e-60 Identities = 111/191 (58%), Positives = 139/191 (72%) Frame = +2 Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184 IK +G PF+ S V SF PT+LFTRNHIS RDG LK RPV Sbjct: 265 IKLHGFPFD-----------PSKVPDLGSALRSFILKRPTMLFTRNHISDRDGNLKQRPV 313 Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364 YA+DD+FI +E M+TFPL + ARK CCIMYG ETIRGSNR I++IA + +FF++DWS Sbjct: 314 YAMDDLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKIASSFRSFFTIDWSG 373 Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544 +DQRLPRVITDI+++DFL +IVI+HGYQPTY+YP+YPDL K++ RMDN+L FLHTWY Sbjct: 374 FDQRLPRVITDIFWSDFLERMIVISHGYQPTYDYPSYPDLTPDKMFQRMDNILFFLHTWY 433 Query: 545 NNMTFLLPDGY 577 NN+ F+ DG+ Sbjct: 434 NNLVFVTADGF 444 [5][TOP] >UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus virus 1 RepID=D0EIN9_9VIRU Length = 502 Score = 231 bits (589), Expect = 3e-59 Identities = 107/191 (56%), Positives = 139/191 (72%) Frame = +2 Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184 IK +G PF+ + DK D SF P +LFTRNHIS RDG LK RPV Sbjct: 265 IKLHGYPFDPSKVPDKG-----------DALRSFILKRPVMLFTRNHISDRDGNLKQRPV 313 Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364 YA+DD+FI +E +TFPL + ARK CCIMYG ETIRGSNR I+++A +Y ++F++DWS Sbjct: 314 YAMDDLFIRLESKITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSYFTIDWSG 373 Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544 +DQRLPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWY Sbjct: 374 FDQRLPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWY 433 Query: 545 NNMTFLLPDGY 577 NN+ ++ DG+ Sbjct: 434 NNLVYVTADGF 444 [6][TOP] >UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1 RepID=Q9YX75_9VIRU Length = 673 Score = 221 bits (562), Expect = 4e-56 Identities = 105/192 (54%), Positives = 135/192 (70%) Frame = +2 Query: 2 FIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRP 181 +IK YG PF +D L + FF PT+LFTRNHIS RDG LK RP Sbjct: 262 WIKLYGNPFRHCPSDLAQSLRE------------FFLQRPTMLFTRNHISDRDGILKQRP 309 Query: 182 VYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWS 361 VYAVDD+F+ IE MLTFP + ARKP CCIMYGLETIRGSN+ +++IA DY +FF++DWS Sbjct: 310 VYAVDDLFLTIESMLTFPAHVIARKPECCIMYGLETIRGSNQILDKIASDYKSFFTIDWS 369 Query: 362 SYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTW 541 +DQRLP VI +++T+++ L+V+NHGY PTYEYP+YPDL + + R+ NL+ FL TW Sbjct: 370 GFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYEYPSYPDLTTNDMVSRLTNLITFLATW 429 Query: 542 YNNMTFLLPDGY 577 Y NM F+ DG+ Sbjct: 430 YFNMVFVTADGF 441 [7][TOP] >UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani virus 717 RepID=Q9Q9X2_9VIRU Length = 730 Score = 189 bits (480), Expect = 1e-46 Identities = 92/191 (48%), Positives = 124/191 (64%) Frame = +2 Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184 IK G PF+ D+ + F +PT++FTRNHISKRDG LKVRPV Sbjct: 293 IKHSGYPFDFTSDSDRNS-----------KMADFLKSFPTMMFTRNHISKRDGTLKVRPV 341 Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364 YAVD++F+ +E ML FP T+QARKP CCIMYGLETIRGSN ++ +A+ + +F ++DWS Sbjct: 342 YAVDELFLDLECMLAFPATVQARKPECCIMYGLETIRGSNIKLDSLAQGFISFATIDWSG 401 Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544 YDQRLP I ++ +L SL++I+HGY PT EY ++ ++ R NL++F TWY Sbjct: 402 YDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSEYED-TSMNISDMFTRFFNLINFTATWY 460 Query: 545 NNMTFLLPDGY 577 NM FL DG+ Sbjct: 461 FNMVFLSADGF 471 [8][TOP] >UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus virus 1 RepID=B2L075_9VIRU Length = 185 Score = 187 bits (475), Expect = 5e-46 Identities = 79/127 (62%), Positives = 105/127 (82%) Frame = +2 Query: 197 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 376 D+FI +E M+TFPL + ARK CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR Sbjct: 1 DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60 Query: 377 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 556 LPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWYNN+ Sbjct: 61 LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120 Query: 557 FLLPDGY 577 ++ DG+ Sbjct: 121 YVTADGF 127 [9][TOP] >UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella hypoxylon virus RepID=Q85055_AHV Length = 665 Score = 134 bits (337), Expect = 5e-30 Identities = 82/214 (38%), Positives = 113/214 (52%), Gaps = 23/214 (10%) Frame = +2 Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184 IKEYG PF TDS + + + +F PT L R+HISKRD LKVRPV Sbjct: 226 IKEYGFPFR--------PTTDSARNETL--LDLWFKKVPTELLVRSHISKRDN-LKVRPV 274 Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364 Y I+I IE ML +PL QARK CCIMYGLETIRG +E+I+ +++F +DWS Sbjct: 275 YNAPMIYIRIECMLFYPLLAQARKRDCCIMYGLETIRGGMNELERISNAFNSFLLIDWSR 334 Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQP-----------------------TYEYPTY 475 +D P I++ ++ +L + I+I+HGY + EY T Sbjct: 335 FDHLAPFTISNFFFKKWLPTKILIDHGYAQISNYHDHVHSFSAQAQSHGIPMISKEYQTP 394 Query: 476 PDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGY 577 P+ ++ NL+ FL WY +M F+ PDG+ Sbjct: 395 PEAT--VFAKKVLNLISFLERWYRDMVFVTPDGF 426 [10][TOP] >UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica partitivirus RepID=Q6X9T6_9VIRU Length = 663 Score = 126 bits (317), Expect = 1e-27 Identities = 74/212 (34%), Positives = 110/212 (51%), Gaps = 21/212 (9%) Frame = +2 Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184 IK YGLPF + + ++ +F PT L R+HIS LKVRPV Sbjct: 230 IKLYGLPFKPHSYEARNKIL----------LELWFKKIPTELLVRSHISNPK-KLKVRPV 278 Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364 IF+ IE ML +PL Q RK C IMYGLETIRG IE +A +S F +DWS Sbjct: 279 NNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMMEIESLATRFSNFMMIDWSK 338 Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDEHK 496 +DQ +P + D++Y D++ +LI+++ GY + Y + +L+E Sbjct: 339 FDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSFAAQARKLGVHGDSNLNEAP 398 Query: 497 -----LYHRMDNLLHFLHTWYNNMTFLLPDGY 577 ++++NLL F++TW+ M ++ PDG+ Sbjct: 399 PEAAVFANKVENLLKFINTWFKEMVYITPDGF 430 [11][TOP] >UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus 1 RepID=Q5DM90_9VIRU Length = 663 Score = 125 bits (314), Expect = 2e-27 Identities = 74/212 (34%), Positives = 109/212 (51%), Gaps = 21/212 (9%) Frame = +2 Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184 IK YGLPF + ++ +F PT L R+HIS LKVRPV Sbjct: 230 IKLYGLPFKPHSYAARNKILQE----------LWFKKIPTELLVRSHISNPK-KLKVRPV 278 Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364 IF+ IE ML +PL Q RK C IMYGLETIRG IE +A +S F +DWS Sbjct: 279 NNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMMEIESLATRFSNFMMIDWSK 338 Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDEHK 496 +DQ +P + D++Y D++ +LI+++ GY + Y + +L+E Sbjct: 339 FDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSFAAQARKLGVHGNSNLNEAP 398 Query: 497 -----LYHRMDNLLHFLHTWYNNMTFLLPDGY 577 ++++NLL F++TW+ M ++ PDG+ Sbjct: 399 PETAIFANKVENLLKFINTWFKEMVYITPDGF 430 [12][TOP] >UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica partitivirus RepID=Q6EM35_9VIRU Length = 663 Score = 125 bits (313), Expect = 3e-27 Identities = 77/214 (35%), Positives = 112/214 (52%), Gaps = 23/214 (10%) Frame = +2 Query: 5 IKEYGLPF--NIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVR 178 IK YGLPF + +A ++T L +F PT L R+HIS LKVR Sbjct: 230 IKLYGLPFKPHSYKARNQTLL------------ELWFKKIPTELLVRSHISNPK-KLKVR 276 Query: 179 PVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDW 358 PV IF+ IE ML +PL Q RK C IMYG ETIRG IE +A +S F +DW Sbjct: 277 PVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGFETIRGGMMEIESLATRFSNFMMIDW 336 Query: 359 SSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDE 490 S +DQ +P + D++Y D++ +LI+I+ GY + Y + +L+E Sbjct: 337 SKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHNYNDHVHSFAAQARKLGVHGNSNLNE 396 Query: 491 -----HKLYHRMDNLLHFLHTWYNNMTFLLPDGY 577 ++++NLL F++TW+ M ++ PDG+ Sbjct: 397 APPEASVFANKVENLLKFINTWFKEMVYITPDGF 430 [13][TOP] >UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion annosum P-type partitivirus RepID=Q8QY51_9VIRU Length = 734 Score = 97.1 bits (240), Expect = 9e-19 Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 31/184 (16%) Frame = +2 Query: 119 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 298 PT+++ R+ ISK LKVRPVY +F+++E MLT L Q RKP CI++ ETIRG Sbjct: 281 PTVMYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRG 339 Query: 299 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT--YEYPT 472 + +I+ +++ F D+S +DQ P I ++ F+ +I ++ GYQ + Y Sbjct: 340 GMHELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQ 399 Query: 473 YPDLDEHKLYHRMD-----------------------------NLLHFLHTWYNNMTFLL 565 Y D K Y +D N+L F+ WY M F+ Sbjct: 400 YA-YDFEKKYDNLDKSEPKFQEFAKKSNNLFPKHVVAFSFVIFNILSFIWWWYVFMVFIT 458 Query: 566 PDGY 577 PDGY Sbjct: 459 PDGY 462 [14][TOP] >UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU Length = 576 Score = 79.7 bits (195), Expect = 1e-13 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 6/159 (3%) Frame = +2 Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLET 289 Y F R H+ + D P KVR V+ ++ ELM +PL + AR P +++G ET Sbjct: 202 YWNTAFARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYET 261 Query: 290 IRGSNRYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT 457 + G + A D YST +LDWS +D+ + + +R + GY PT Sbjct: 262 LTGGWSRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPT 321 Query: 458 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 574 YP PD + R++NL +++ + +LPDG Sbjct: 322 ISYPNAPDTNP----DRLENLWNWMTDAILTVPLMLPDG 356 [15][TOP] >UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1 RepID=B2CGP3_9VIRU Length = 616 Score = 59.7 bits (143), Expect = 2e-07 Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 11/164 (6%) Frame = +2 Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 289 +P LL T+ I K+D P K+R ++ +II E ML + + PS +++G ET Sbjct: 230 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 289 Query: 290 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 448 G ++ RD +F +LDWS +D+R ++ I YT R+ + + GY Sbjct: 290 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 344 Query: 449 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDG 574 PT+ PT+P D K R++ L +L T N +LPDG Sbjct: 345 VPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDG 385 [16][TOP] >UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1 RepID=D0EP81_9VIRU Length = 559 Score = 59.3 bits (142), Expect = 2e-07 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 9/162 (5%) Frame = +2 Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 289 +P LL T+ I K+D P K+R ++ +II E ML + + PS +++G ET Sbjct: 174 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 233 Query: 290 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 448 G ++ RD +F +LDWS +D+R ++ I YT R+ + + GY Sbjct: 234 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 288 Query: 449 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 574 PT+ PT+P D K L L + +LPDG Sbjct: 289 VPTHSAPTHPQWDHTKAIRHERLWLWTLENLF-EAPIILPDG 329 [17][TOP] >UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning virus RepID=C0STM0_9VIRU Length = 580 Score = 59.3 bits (142), Expect = 2e-07 Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 9/147 (6%) Frame = +2 Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETI 292 YP + T++ I P KVR ++ V + +++E M +PL R + +++G ET+ Sbjct: 199 YPINIHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETM 258 Query: 293 RGS----NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 457 G N + + SLDWS +D R L VI D+Y ++S N+GY PT Sbjct: 259 LGGWYKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPT 318 Query: 458 YEYP---TYPDLDEHKLYHRMDNLLHF 529 +YP T+P H L+ M L F Sbjct: 319 VDYPDSSTHPQ-KLHNLWDWMLTALKF 344 [18][TOP] >UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=Q4KUU4_9VIRU Length = 616 Score = 58.5 bits (140), Expect = 4e-07 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%) Frame = +2 Query: 53 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226 T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268 Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394 + ++ S +++G ET G + Q+ +F +LDWS +D+R ++ Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328 Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568 I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383 Query: 569 DG 574 DG Sbjct: 384 DG 385 [19][TOP] >UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=B2M1T3_9VIRU Length = 616 Score = 58.5 bits (140), Expect = 4e-07 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%) Frame = +2 Query: 53 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226 T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268 Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394 + ++ S +++G ET G + Q+ +F +LDWS +D+R ++ Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328 Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568 I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383 Query: 569 DG 574 DG Sbjct: 384 DG 385 [20][TOP] >UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=A3R744_9VIRU Length = 616 Score = 58.5 bits (140), Expect = 4e-07 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%) Frame = +2 Query: 53 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226 T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268 Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394 + ++ S +++G ET G + Q+ +F +LDWS +D+R ++ Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328 Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568 I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383 Query: 569 DG 574 DG Sbjct: 384 DG 385 [21][TOP] >UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=A3R742_9VIRU Length = 616 Score = 58.5 bits (140), Expect = 4e-07 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%) Frame = +2 Query: 53 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226 T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268 Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394 + ++ S +++G ET G + Q+ +F +LDWS +D+R ++ Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328 Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568 I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383 Query: 569 DG 574 DG Sbjct: 384 DG 385 [22][TOP] >UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=A3R739_9VIRU Length = 616 Score = 58.5 bits (140), Expect = 4e-07 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%) Frame = +2 Query: 53 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226 T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268 Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394 + ++ S +++G ET G + Q+ +F +LDWS +D+R ++ Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328 Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568 I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383 Query: 569 DG 574 DG Sbjct: 384 DG 385 [23][TOP] >UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1 RepID=Q64FP0_WCCV1 Length = 616 Score = 57.0 bits (136), Expect = 1e-06 Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 13/176 (7%) Frame = +2 Query: 86 IDEANSFFNDY--PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQAR 253 +++ FFN + P LL T+ I K++ P K+R ++ +II E M + I+ Sbjct: 218 LEQTGYFFNRFIFPMLLHTKTAIVKKNDPNKMRTIWGASKPWIIAETMFYWEYLAWIKHN 277 Query: 254 KPSCCIMYGLETIRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTD 412 + +++G ET G + I R +F +LDWS +D+R ++ I YT Sbjct: 278 PGATPMLWGYETFTGGWFRLNHELFCGLIQR---SFLTLDWSRFDKRAYFPLLRRILYT- 333 Query: 413 FLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDG 574 +++ + GY PT+ PT+P + + R++ L +L T N +LPDG Sbjct: 334 -VKTFLTFEEGYVPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDG 385 [24][TOP] >UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric virus II RepID=Q7TDZ9_9VIRU Length = 610 Score = 56.6 bits (135), Expect = 1e-06 Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 12/165 (7%) Frame = +2 Query: 116 YPTLLFTRNHI-SKRDGPL---KVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMY 277 Y F R HI K+ G L KVR V+ + EL+ +PL + + +++ Sbjct: 237 YWNTAFARQHIVEKKPGILAQPKVRLVFGAPFTLLTAELIFIWPLQTHLLLMQDFSPMLW 296 Query: 278 GLETIRGS-NRYIEQIARDYST---FFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHG 445 G ETI G R ++ T +LDWS +D+ + +T +R +G Sbjct: 297 GYETILGGWYRLRGHLSGKIDTDKLVATLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNG 356 Query: 446 YQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 574 Y PT+ YP T D DE + R++NL +++ + L+PDG Sbjct: 357 YHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDG 401 [25][TOP] >UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus partitivirus RepID=A2VA07_9VIRU Length = 132 Score = 56.2 bits (134), Expect = 2e-06 Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 6/118 (5%) Frame = +2 Query: 122 TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETI 292 T L +R+H+ + D P K+R V+ V + +++E M + + + +++G ETI Sbjct: 8 TYLHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETI 67 Query: 293 RGS-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 457 RG + I Q+ ++ S+ S DWS +D + L VI D++ D +S N GY+P+ Sbjct: 68 RGGWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123 [26][TOP] >UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus RepID=B8YNW9_9VIRU Length = 616 Score = 53.9 bits (128), Expect = 9e-06 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 11/164 (6%) Frame = +2 Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 289 +P LL T+ I K + P K+R ++ +II E ML + I+ + +++G ET Sbjct: 230 FPMLLHTKTAIVKHNDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPGTTPMLWGYET 289 Query: 290 IRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 448 G Y I +F +LDWS +D+R ++ I Y +RS + + GY Sbjct: 290 FTGGWFRLNHQLYCGMIKH---SFLTLDWSRFDKRAYFPLLRRILYP--VRSFLTFDEGY 344 Query: 449 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDG 574 PT+ P +P + K R++ L +L T N +LPDG Sbjct: 345 VPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDG 385