BB911036 ( RCE10084 )

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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
           virus China/Mar2007 RepID=A8W7G1_9VIRU
          Length = 723

 Score =  351 bits (900), Expect = 3e-95
 Identities = 166/191 (86%), Positives = 175/191 (91%)
 Frame = +2

Query: 5   IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
           IK YGLPFN+  A  K++LTD  +  YI +AN FFNDYPTLLFTRNHISKR G LKVRPV
Sbjct: 270 IKTYGLPFNMQFACPKSDLTDEQINLYISKANQFFNDYPTLLFTRNHISKRSGTLKVRPV 329

Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
           YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSN YI+++AR YSTFFSLDWSS
Sbjct: 330 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNHYIDRLARPYSTFFSLDWSS 389

Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544
           YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWY
Sbjct: 390 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWY 449

Query: 545 NNMTFLLPDGY 577
           NNMTFLLPDGY
Sbjct: 450 NNMTFLLPDGY 460

[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
           partitivirus 1-W8 RepID=Q50LH7_9VIRU
          Length = 709

 Score =  248 bits (634), Expect = 2e-64
 Identities = 120/195 (61%), Positives = 142/195 (72%), Gaps = 4/195 (2%)
 Frame = +2

Query: 5   IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
           IKE+G PF          +   D      +   F   + T+LFTRNHIS RDG LK RPV
Sbjct: 265 IKEHGYPF----------VPSHDALDNARQYRIFMQKHVTMLFTRNHISDRDGFLKQRPV 314

Query: 185 YAVDDIFIIIELMLTFPLTIQARKP----SCCIMYGLETIRGSNRYIEQIARDYSTFFSL 352
           YAVDD FI+ ELM++FPL + AR P      CIMY  ETIRGSNRY++ IARD+ +FF++
Sbjct: 315 YAVDDFFILCELMISFPLHVMARYPINGIKSCIMYSFETIRGSNRYLDSIARDFISFFTI 374

Query: 353 DWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFL 532
           DWSS+DQR+PRVITDI++TDFLR LIVINHGYQPTYEYP YPDL EH LY RM+NLLHFL
Sbjct: 375 DWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQPTYEYPAYPDLSEHDLYKRMNNLLHFL 434

Query: 533 HTWYNNMTFLLPDGY 577
           HTWYNNM F+  DG+
Sbjct: 435 HTWYNNMVFVTADGF 449

[3][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-1 RepID=Q6BE43_9VIRU
          Length = 706

 Score =  241 bits (614), Expect = 4e-62
 Identities = 112/191 (58%), Positives = 137/191 (71%)
 Frame = +2

Query: 5   IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
           +K++ LPFN           D D          FF   PT+LFTRNHIS RDG LK RPV
Sbjct: 264 LKQFALPFNP---------KDFDSSSIFSRMRFFFLTRPTMLFTRNHISDRDGNLKQRPV 314

Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
           YAVDD+F+I+E+MLTFPL + AR P CCIMYGLETIRGSN +I+  A+ + ++F++DWS 
Sbjct: 315 YAVDDLFLILEVMLTFPLLVMARLPECCIMYGLETIRGSNHWIDSTAKRFRSYFTIDWSQ 374

Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544
           YDQRLPR ITD+YYTDFL SLI+IN GYQPT +Y  YPDL    ++ RM NLLHFLHTWY
Sbjct: 375 YDQRLPRCITDLYYTDFLESLIIINFGYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWY 434

Query: 545 NNMTFLLPDGY 577
           NNM ++  DG+
Sbjct: 435 NNMVYVTADGF 445

[4][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
           RepID=Q5GHF1_9VIRU
          Length = 706

 Score =  235 bits (599), Expect = 2e-60
 Identities = 111/191 (58%), Positives = 139/191 (72%)
 Frame = +2

Query: 5   IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
           IK +G PF+            S V        SF    PT+LFTRNHIS RDG LK RPV
Sbjct: 265 IKLHGFPFD-----------PSKVPDLGSALRSFILKRPTMLFTRNHISDRDGNLKQRPV 313

Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
           YA+DD+FI +E M+TFPL + ARK  CCIMYG ETIRGSNR I++IA  + +FF++DWS 
Sbjct: 314 YAMDDLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKIASSFRSFFTIDWSG 373

Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544
           +DQRLPRVITDI+++DFL  +IVI+HGYQPTY+YP+YPDL   K++ RMDN+L FLHTWY
Sbjct: 374 FDQRLPRVITDIFWSDFLERMIVISHGYQPTYDYPSYPDLTPDKMFQRMDNILFFLHTWY 433

Query: 545 NNMTFLLPDGY 577
           NN+ F+  DG+
Sbjct: 434 NNLVFVTADGF 444

[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=D0EIN9_9VIRU
          Length = 502

 Score =  231 bits (589), Expect = 3e-59
 Identities = 107/191 (56%), Positives = 139/191 (72%)
 Frame = +2

Query: 5   IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
           IK +G PF+  +  DK            D   SF    P +LFTRNHIS RDG LK RPV
Sbjct: 265 IKLHGYPFDPSKVPDKG-----------DALRSFILKRPVMLFTRNHISDRDGNLKQRPV 313

Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
           YA+DD+FI +E  +TFPL + ARK  CCIMYG ETIRGSNR I+++A +Y ++F++DWS 
Sbjct: 314 YAMDDLFIRLESKITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSYFTIDWSG 373

Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544
           +DQRLPRVITDI++TDFL  +IVI+HGYQPT++YP+YPDL   K++ RM N+L FLHTWY
Sbjct: 374 FDQRLPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWY 433

Query: 545 NNMTFLLPDGY 577
           NN+ ++  DG+
Sbjct: 434 NNLVYVTADGF 444

[6][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
           RepID=Q9YX75_9VIRU
          Length = 673

 Score =  221 bits (562), Expect = 4e-56
 Identities = 105/192 (54%), Positives = 135/192 (70%)
 Frame = +2

Query: 2   FIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRP 181
           +IK YG PF    +D    L +            FF   PT+LFTRNHIS RDG LK RP
Sbjct: 262 WIKLYGNPFRHCPSDLAQSLRE------------FFLQRPTMLFTRNHISDRDGILKQRP 309

Query: 182 VYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWS 361
           VYAVDD+F+ IE MLTFP  + ARKP CCIMYGLETIRGSN+ +++IA DY +FF++DWS
Sbjct: 310 VYAVDDLFLTIESMLTFPAHVIARKPECCIMYGLETIRGSNQILDKIASDYKSFFTIDWS 369

Query: 362 SYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTW 541
            +DQRLP VI  +++T+++  L+V+NHGY PTYEYP+YPDL  + +  R+ NL+ FL TW
Sbjct: 370 GFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYEYPSYPDLTTNDMVSRLTNLITFLATW 429

Query: 542 YNNMTFLLPDGY 577
           Y NM F+  DG+
Sbjct: 430 YFNMVFVTADGF 441

[7][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
           virus 717 RepID=Q9Q9X2_9VIRU
          Length = 730

 Score =  189 bits (480), Expect = 1e-46
 Identities = 92/191 (48%), Positives = 124/191 (64%)
 Frame = +2

Query: 5   IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
           IK  G PF+     D+             +   F   +PT++FTRNHISKRDG LKVRPV
Sbjct: 293 IKHSGYPFDFTSDSDRNS-----------KMADFLKSFPTMMFTRNHISKRDGTLKVRPV 341

Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
           YAVD++F+ +E ML FP T+QARKP CCIMYGLETIRGSN  ++ +A+ + +F ++DWS 
Sbjct: 342 YAVDELFLDLECMLAFPATVQARKPECCIMYGLETIRGSNIKLDSLAQGFISFATIDWSG 401

Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544
           YDQRLP  I   ++  +L SL++I+HGY PT EY     ++   ++ R  NL++F  TWY
Sbjct: 402 YDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSEYED-TSMNISDMFTRFFNLINFTATWY 460

Query: 545 NNMTFLLPDGY 577
            NM FL  DG+
Sbjct: 461 FNMVFLSADGF 471

[8][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=B2L075_9VIRU
          Length = 185

 Score =  187 bits (475), Expect = 5e-46
 Identities = 79/127 (62%), Positives = 105/127 (82%)
 Frame = +2

Query: 197 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 376
           D+FI +E M+TFPL + ARK  CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1   DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60

Query: 377 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 556
           LPRVITDI++TDFL  +IVI+HGYQPT++YP+YPDL   K++ RM N+L FLHTWYNN+ 
Sbjct: 61  LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120

Query: 557 FLLPDGY 577
           ++  DG+
Sbjct: 121 YVTADGF 127

[9][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
           hypoxylon virus RepID=Q85055_AHV
          Length = 665

 Score =  134 bits (337), Expect = 5e-30
 Identities = 82/214 (38%), Positives = 113/214 (52%), Gaps = 23/214 (10%)
 Frame = +2

Query: 5   IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
           IKEYG PF           TDS   + +   + +F   PT L  R+HISKRD  LKVRPV
Sbjct: 226 IKEYGFPFR--------PTTDSARNETL--LDLWFKKVPTELLVRSHISKRDN-LKVRPV 274

Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
           Y    I+I IE ML +PL  QARK  CCIMYGLETIRG    +E+I+  +++F  +DWS 
Sbjct: 275 YNAPMIYIRIECMLFYPLLAQARKRDCCIMYGLETIRGGMNELERISNAFNSFLLIDWSR 334

Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQP-----------------------TYEYPTY 475
           +D   P  I++ ++  +L + I+I+HGY                         + EY T 
Sbjct: 335 FDHLAPFTISNFFFKKWLPTKILIDHGYAQISNYHDHVHSFSAQAQSHGIPMISKEYQTP 394

Query: 476 PDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGY 577
           P+        ++ NL+ FL  WY +M F+ PDG+
Sbjct: 395 PEAT--VFAKKVLNLISFLERWYRDMVFVTPDGF 426

[10][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6X9T6_9VIRU
          Length = 663

 Score =  126 bits (317), Expect = 1e-27
 Identities = 74/212 (34%), Positives = 110/212 (51%), Gaps = 21/212 (9%)
 Frame = +2

Query: 5   IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
           IK YGLPF     + + ++              +F   PT L  R+HIS     LKVRPV
Sbjct: 230 IKLYGLPFKPHSYEARNKIL----------LELWFKKIPTELLVRSHISNPK-KLKVRPV 278

Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
                IF+ IE ML +PL  Q RK  C IMYGLETIRG    IE +A  +S F  +DWS 
Sbjct: 279 NNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMMEIESLATRFSNFMMIDWSK 338

Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDEHK 496
           +DQ +P  + D++Y D++ +LI+++ GY   + Y  +                 +L+E  
Sbjct: 339 FDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSFAAQARKLGVHGDSNLNEAP 398

Query: 497 -----LYHRMDNLLHFLHTWYNNMTFLLPDGY 577
                  ++++NLL F++TW+  M ++ PDG+
Sbjct: 399 PEAAVFANKVENLLKFINTWFKEMVYITPDGF 430

[11][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
           1 RepID=Q5DM90_9VIRU
          Length = 663

 Score =  125 bits (314), Expect = 2e-27
 Identities = 74/212 (34%), Positives = 109/212 (51%), Gaps = 21/212 (9%)
 Frame = +2

Query: 5   IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
           IK YGLPF       + ++              +F   PT L  R+HIS     LKVRPV
Sbjct: 230 IKLYGLPFKPHSYAARNKILQE----------LWFKKIPTELLVRSHISNPK-KLKVRPV 278

Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
                IF+ IE ML +PL  Q RK  C IMYGLETIRG    IE +A  +S F  +DWS 
Sbjct: 279 NNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMMEIESLATRFSNFMMIDWSK 338

Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDEHK 496
           +DQ +P  + D++Y D++ +LI+++ GY   + Y  +                 +L+E  
Sbjct: 339 FDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSFAAQARKLGVHGNSNLNEAP 398

Query: 497 -----LYHRMDNLLHFLHTWYNNMTFLLPDGY 577
                  ++++NLL F++TW+  M ++ PDG+
Sbjct: 399 PETAIFANKVENLLKFINTWFKEMVYITPDGF 430

[12][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6EM35_9VIRU
          Length = 663

 Score =  125 bits (313), Expect = 3e-27
 Identities = 77/214 (35%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
 Frame = +2

Query: 5   IKEYGLPF--NIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVR 178
           IK YGLPF  +  +A ++T L              +F   PT L  R+HIS     LKVR
Sbjct: 230 IKLYGLPFKPHSYKARNQTLL------------ELWFKKIPTELLVRSHISNPK-KLKVR 276

Query: 179 PVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDW 358
           PV     IF+ IE ML +PL  Q RK  C IMYG ETIRG    IE +A  +S F  +DW
Sbjct: 277 PVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGFETIRGGMMEIESLATRFSNFMMIDW 336

Query: 359 SSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDE 490
           S +DQ +P  + D++Y D++ +LI+I+ GY   + Y  +                 +L+E
Sbjct: 337 SKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHNYNDHVHSFAAQARKLGVHGNSNLNE 396

Query: 491 -----HKLYHRMDNLLHFLHTWYNNMTFLLPDGY 577
                    ++++NLL F++TW+  M ++ PDG+
Sbjct: 397 APPEASVFANKVENLLKFINTWFKEMVYITPDGF 430

[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
           annosum P-type partitivirus RepID=Q8QY51_9VIRU
          Length = 734

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
 Frame = +2

Query: 119 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 298
           PT+++ R+ ISK    LKVRPVY    +F+++E MLT  L  Q RKP  CI++  ETIRG
Sbjct: 281 PTVMYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRG 339

Query: 299 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT--YEYPT 472
               + +I+ +++ F   D+S +DQ  P  I   ++  F+  +I ++ GYQ +  Y    
Sbjct: 340 GMHELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQ 399

Query: 473 YPDLDEHKLYHRMD-----------------------------NLLHFLHTWYNNMTFLL 565
           Y   D  K Y  +D                             N+L F+  WY  M F+ 
Sbjct: 400 YA-YDFEKKYDNLDKSEPKFQEFAKKSNNLFPKHVVAFSFVIFNILSFIWWWYVFMVFIT 458

Query: 566 PDGY 577
           PDGY
Sbjct: 459 PDGY 462

[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
          Length = 576

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
 Frame = +2

Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLET 289
           Y    F R H+ + D P KVR V+      ++ ELM  +PL +   AR P   +++G ET
Sbjct: 202 YWNTAFARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYET 261

Query: 290 IRGSNRYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT 457
           + G    +   A D    YST  +LDWS +D+     +    +   +R +     GY PT
Sbjct: 262 LTGGWSRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPT 321

Query: 458 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 574
             YP  PD +      R++NL +++      +  +LPDG
Sbjct: 322 ISYPNAPDTNP----DRLENLWNWMTDAILTVPLMLPDG 356

[15][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
           RepID=B2CGP3_9VIRU
          Length = 616

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
 Frame = +2

Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 289
           +P LL T+  I K+D P K+R ++     +II E ML +      +  PS   +++G ET
Sbjct: 230 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 289

Query: 290 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 448
             G      ++ RD        +F +LDWS +D+R    ++  I YT   R+ +  + GY
Sbjct: 290 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 344

Query: 449 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDG 574
            PT+  PT+P  D  K   R++ L  +L T  N      +LPDG
Sbjct: 345 VPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDG 385

[16][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
           cryptic virus 1 RepID=D0EP81_9VIRU
          Length = 559

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
 Frame = +2

Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 289
           +P LL T+  I K+D P K+R ++     +II E ML +      +  PS   +++G ET
Sbjct: 174 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 233

Query: 290 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 448
             G      ++ RD        +F +LDWS +D+R    ++  I YT   R+ +  + GY
Sbjct: 234 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 288

Query: 449 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 574
            PT+  PT+P  D  K        L  L   +     +LPDG
Sbjct: 289 VPTHSAPTHPQWDHTKAIRHERLWLWTLENLF-EAPIILPDG 329

[17][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
           virus RepID=C0STM0_9VIRU
          Length = 580

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
 Frame = +2

Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETI 292
           YP  + T++ I     P KVR ++ V  + +++E M  +PL    R +    +++G ET+
Sbjct: 199 YPINIHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETM 258

Query: 293 RGS----NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 457
            G     N  +        +  SLDWS +D R L  VI D+Y    ++S    N+GY PT
Sbjct: 259 LGGWYKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPT 318

Query: 458 YEYP---TYPDLDEHKLYHRMDNLLHF 529
            +YP   T+P    H L+  M   L F
Sbjct: 319 VDYPDSSTHPQ-KLHNLWDWMLTALKF 344

[18][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=Q4KUU4_9VIRU
          Length = 616

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
 Frame = +2

Query: 53  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568
            I YT  ++S +    GY PT+  P +P  ++ K   +++ L  +L T  N      +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383

Query: 569 DG 574
           DG
Sbjct: 384 DG 385

[19][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=B2M1T3_9VIRU
          Length = 616

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
 Frame = +2

Query: 53  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568
            I YT  ++S +    GY PT+  P +P  ++ K   +++ L  +L T  N      +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383

Query: 569 DG 574
           DG
Sbjct: 384 DG 385

[20][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R744_9VIRU
          Length = 616

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
 Frame = +2

Query: 53  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568
            I YT  ++S +    GY PT+  P +P  ++ K   +++ L  +L T  N      +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383

Query: 569 DG 574
           DG
Sbjct: 384 DG 385

[21][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R742_9VIRU
          Length = 616

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
 Frame = +2

Query: 53  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568
            I YT  ++S +    GY PT+  P +P  ++ K   +++ L  +L T  N      +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383

Query: 569 DG 574
           DG
Sbjct: 384 DG 385

[22][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R739_9VIRU
          Length = 616

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
 Frame = +2

Query: 53  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568
            I YT  ++S +    GY PT+  P +P  ++ K   +++ L  +L T  N      +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383

Query: 569 DG 574
           DG
Sbjct: 384 DG 385

[23][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
           RepID=Q64FP0_WCCV1
          Length = 616

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
 Frame = +2

Query: 86  IDEANSFFNDY--PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQAR 253
           +++   FFN +  P LL T+  I K++ P K+R ++     +II E M  +     I+  
Sbjct: 218 LEQTGYFFNRFIFPMLLHTKTAIVKKNDPNKMRTIWGASKPWIIAETMFYWEYLAWIKHN 277

Query: 254 KPSCCIMYGLETIRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTD 412
             +  +++G ET  G         +   I R   +F +LDWS +D+R    ++  I YT 
Sbjct: 278 PGATPMLWGYETFTGGWFRLNHELFCGLIQR---SFLTLDWSRFDKRAYFPLLRRILYT- 333

Query: 413 FLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDG 574
            +++ +    GY PT+  PT+P   +  +  R++ L  +L T  N      +LPDG
Sbjct: 334 -VKTFLTFEEGYVPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDG 385

[24][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
           virus II RepID=Q7TDZ9_9VIRU
          Length = 610

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
 Frame = +2

Query: 116 YPTLLFTRNHI-SKRDGPL---KVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMY 277
           Y    F R HI  K+ G L   KVR V+      +  EL+  +PL   +   +    +++
Sbjct: 237 YWNTAFARQHIVEKKPGILAQPKVRLVFGAPFTLLTAELIFIWPLQTHLLLMQDFSPMLW 296

Query: 278 GLETIRGS-NRYIEQIARDYST---FFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHG 445
           G ETI G   R    ++    T     +LDWS +D+     +    +T  +R      +G
Sbjct: 297 GYETILGGWYRLRGHLSGKIDTDKLVATLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNG 356

Query: 446 YQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 574
           Y PT+ YP  T  D DE  +  R++NL +++      +  L+PDG
Sbjct: 357 YHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDG 401

[25][TOP]
>UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus
           partitivirus RepID=A2VA07_9VIRU
          Length = 132

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
 Frame = +2

Query: 122 TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETI 292
           T L +R+H+ + D P K+R V+ V  + +++E M  + +    +        +++G ETI
Sbjct: 8   TYLHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETI 67

Query: 293 RGS-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 457
           RG   + I Q+ ++  S+  S DWS +D + L  VI D++  D  +S    N GY+P+
Sbjct: 68  RGGWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123

[26][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
           RepID=B8YNW9_9VIRU
          Length = 616

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
 Frame = +2

Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 289
           +P LL T+  I K + P K+R ++     +II E ML +     I+    +  +++G ET
Sbjct: 230 FPMLLHTKTAIVKHNDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPGTTPMLWGYET 289

Query: 290 IRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 448
             G         Y   I     +F +LDWS +D+R    ++  I Y   +RS +  + GY
Sbjct: 290 FTGGWFRLNHQLYCGMIKH---SFLTLDWSRFDKRAYFPLLRRILYP--VRSFLTFDEGY 344

Query: 449 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDG 574
            PT+  P +P  +  K   R++ L  +L T  N      +LPDG
Sbjct: 345 VPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDG 385