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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
virus China/Mar2007 RepID=A8W7G1_9VIRU
Length = 723
Score = 351 bits (900), Expect = 3e-95
Identities = 166/191 (86%), Positives = 175/191 (91%)
Frame = +2
Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
IK YGLPFN+ A K++LTD + YI +AN FFNDYPTLLFTRNHISKR G LKVRPV
Sbjct: 270 IKTYGLPFNMQFACPKSDLTDEQINLYISKANQFFNDYPTLLFTRNHISKRSGTLKVRPV 329
Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSN YI+++AR YSTFFSLDWSS
Sbjct: 330 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNHYIDRLARPYSTFFSLDWSS 389
Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544
YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWY
Sbjct: 390 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWY 449
Query: 545 NNMTFLLPDGY 577
NNMTFLLPDGY
Sbjct: 450 NNMTFLLPDGY 460
[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
partitivirus 1-W8 RepID=Q50LH7_9VIRU
Length = 709
Score = 248 bits (634), Expect = 2e-64
Identities = 120/195 (61%), Positives = 142/195 (72%), Gaps = 4/195 (2%)
Frame = +2
Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
IKE+G PF + D + F + T+LFTRNHIS RDG LK RPV
Sbjct: 265 IKEHGYPF----------VPSHDALDNARQYRIFMQKHVTMLFTRNHISDRDGFLKQRPV 314
Query: 185 YAVDDIFIIIELMLTFPLTIQARKP----SCCIMYGLETIRGSNRYIEQIARDYSTFFSL 352
YAVDD FI+ ELM++FPL + AR P CIMY ETIRGSNRY++ IARD+ +FF++
Sbjct: 315 YAVDDFFILCELMISFPLHVMARYPINGIKSCIMYSFETIRGSNRYLDSIARDFISFFTI 374
Query: 353 DWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFL 532
DWSS+DQR+PRVITDI++TDFLR LIVINHGYQPTYEYP YPDL EH LY RM+NLLHFL
Sbjct: 375 DWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQPTYEYPAYPDLSEHDLYKRMNNLLHFL 434
Query: 533 HTWYNNMTFLLPDGY 577
HTWYNNM F+ DG+
Sbjct: 435 HTWYNNMVFVTADGF 449
[3][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-1 RepID=Q6BE43_9VIRU
Length = 706
Score = 241 bits (614), Expect = 4e-62
Identities = 112/191 (58%), Positives = 137/191 (71%)
Frame = +2
Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
+K++ LPFN D D FF PT+LFTRNHIS RDG LK RPV
Sbjct: 264 LKQFALPFNP---------KDFDSSSIFSRMRFFFLTRPTMLFTRNHISDRDGNLKQRPV 314
Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
YAVDD+F+I+E+MLTFPL + AR P CCIMYGLETIRGSN +I+ A+ + ++F++DWS
Sbjct: 315 YAVDDLFLILEVMLTFPLLVMARLPECCIMYGLETIRGSNHWIDSTAKRFRSYFTIDWSQ 374
Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544
YDQRLPR ITD+YYTDFL SLI+IN GYQPT +Y YPDL ++ RM NLLHFLHTWY
Sbjct: 375 YDQRLPRCITDLYYTDFLESLIIINFGYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWY 434
Query: 545 NNMTFLLPDGY 577
NNM ++ DG+
Sbjct: 435 NNMVYVTADGF 445
[4][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
RepID=Q5GHF1_9VIRU
Length = 706
Score = 235 bits (599), Expect = 2e-60
Identities = 111/191 (58%), Positives = 139/191 (72%)
Frame = +2
Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
IK +G PF+ S V SF PT+LFTRNHIS RDG LK RPV
Sbjct: 265 IKLHGFPFD-----------PSKVPDLGSALRSFILKRPTMLFTRNHISDRDGNLKQRPV 313
Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
YA+DD+FI +E M+TFPL + ARK CCIMYG ETIRGSNR I++IA + +FF++DWS
Sbjct: 314 YAMDDLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKIASSFRSFFTIDWSG 373
Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544
+DQRLPRVITDI+++DFL +IVI+HGYQPTY+YP+YPDL K++ RMDN+L FLHTWY
Sbjct: 374 FDQRLPRVITDIFWSDFLERMIVISHGYQPTYDYPSYPDLTPDKMFQRMDNILFFLHTWY 433
Query: 545 NNMTFLLPDGY 577
NN+ F+ DG+
Sbjct: 434 NNLVFVTADGF 444
[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=D0EIN9_9VIRU
Length = 502
Score = 231 bits (589), Expect = 3e-59
Identities = 107/191 (56%), Positives = 139/191 (72%)
Frame = +2
Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
IK +G PF+ + DK D SF P +LFTRNHIS RDG LK RPV
Sbjct: 265 IKLHGYPFDPSKVPDKG-----------DALRSFILKRPVMLFTRNHISDRDGNLKQRPV 313
Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
YA+DD+FI +E +TFPL + ARK CCIMYG ETIRGSNR I+++A +Y ++F++DWS
Sbjct: 314 YAMDDLFIRLESKITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSYFTIDWSG 373
Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544
+DQRLPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWY
Sbjct: 374 FDQRLPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWY 433
Query: 545 NNMTFLLPDGY 577
NN+ ++ DG+
Sbjct: 434 NNLVYVTADGF 444
[6][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
RepID=Q9YX75_9VIRU
Length = 673
Score = 221 bits (562), Expect = 4e-56
Identities = 105/192 (54%), Positives = 135/192 (70%)
Frame = +2
Query: 2 FIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRP 181
+IK YG PF +D L + FF PT+LFTRNHIS RDG LK RP
Sbjct: 262 WIKLYGNPFRHCPSDLAQSLRE------------FFLQRPTMLFTRNHISDRDGILKQRP 309
Query: 182 VYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWS 361
VYAVDD+F+ IE MLTFP + ARKP CCIMYGLETIRGSN+ +++IA DY +FF++DWS
Sbjct: 310 VYAVDDLFLTIESMLTFPAHVIARKPECCIMYGLETIRGSNQILDKIASDYKSFFTIDWS 369
Query: 362 SYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTW 541
+DQRLP VI +++T+++ L+V+NHGY PTYEYP+YPDL + + R+ NL+ FL TW
Sbjct: 370 GFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYEYPSYPDLTTNDMVSRLTNLITFLATW 429
Query: 542 YNNMTFLLPDGY 577
Y NM F+ DG+
Sbjct: 430 YFNMVFVTADGF 441
[7][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
virus 717 RepID=Q9Q9X2_9VIRU
Length = 730
Score = 189 bits (480), Expect = 1e-46
Identities = 92/191 (48%), Positives = 124/191 (64%)
Frame = +2
Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
IK G PF+ D+ + F +PT++FTRNHISKRDG LKVRPV
Sbjct: 293 IKHSGYPFDFTSDSDRNS-----------KMADFLKSFPTMMFTRNHISKRDGTLKVRPV 341
Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
YAVD++F+ +E ML FP T+QARKP CCIMYGLETIRGSN ++ +A+ + +F ++DWS
Sbjct: 342 YAVDELFLDLECMLAFPATVQARKPECCIMYGLETIRGSNIKLDSLAQGFISFATIDWSG 401
Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWY 544
YDQRLP I ++ +L SL++I+HGY PT EY ++ ++ R NL++F TWY
Sbjct: 402 YDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSEYED-TSMNISDMFTRFFNLINFTATWY 460
Query: 545 NNMTFLLPDGY 577
NM FL DG+
Sbjct: 461 FNMVFLSADGF 471
[8][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=B2L075_9VIRU
Length = 185
Score = 187 bits (475), Expect = 5e-46
Identities = 79/127 (62%), Positives = 105/127 (82%)
Frame = +2
Query: 197 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 376
D+FI +E M+TFPL + ARK CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1 DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60
Query: 377 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 556
LPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWYNN+
Sbjct: 61 LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120
Query: 557 FLLPDGY 577
++ DG+
Sbjct: 121 YVTADGF 127
[9][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
hypoxylon virus RepID=Q85055_AHV
Length = 665
Score = 134 bits (337), Expect = 5e-30
Identities = 82/214 (38%), Positives = 113/214 (52%), Gaps = 23/214 (10%)
Frame = +2
Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
IKEYG PF TDS + + + +F PT L R+HISKRD LKVRPV
Sbjct: 226 IKEYGFPFR--------PTTDSARNETL--LDLWFKKVPTELLVRSHISKRDN-LKVRPV 274
Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
Y I+I IE ML +PL QARK CCIMYGLETIRG +E+I+ +++F +DWS
Sbjct: 275 YNAPMIYIRIECMLFYPLLAQARKRDCCIMYGLETIRGGMNELERISNAFNSFLLIDWSR 334
Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQP-----------------------TYEYPTY 475
+D P I++ ++ +L + I+I+HGY + EY T
Sbjct: 335 FDHLAPFTISNFFFKKWLPTKILIDHGYAQISNYHDHVHSFSAQAQSHGIPMISKEYQTP 394
Query: 476 PDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGY 577
P+ ++ NL+ FL WY +M F+ PDG+
Sbjct: 395 PEAT--VFAKKVLNLISFLERWYRDMVFVTPDGF 426
[10][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6X9T6_9VIRU
Length = 663
Score = 126 bits (317), Expect = 1e-27
Identities = 74/212 (34%), Positives = 110/212 (51%), Gaps = 21/212 (9%)
Frame = +2
Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
IK YGLPF + + ++ +F PT L R+HIS LKVRPV
Sbjct: 230 IKLYGLPFKPHSYEARNKIL----------LELWFKKIPTELLVRSHISNPK-KLKVRPV 278
Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
IF+ IE ML +PL Q RK C IMYGLETIRG IE +A +S F +DWS
Sbjct: 279 NNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMMEIESLATRFSNFMMIDWSK 338
Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDEHK 496
+DQ +P + D++Y D++ +LI+++ GY + Y + +L+E
Sbjct: 339 FDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSFAAQARKLGVHGDSNLNEAP 398
Query: 497 -----LYHRMDNLLHFLHTWYNNMTFLLPDGY 577
++++NLL F++TW+ M ++ PDG+
Sbjct: 399 PEAAVFANKVENLLKFINTWFKEMVYITPDGF 430
[11][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
1 RepID=Q5DM90_9VIRU
Length = 663
Score = 125 bits (314), Expect = 2e-27
Identities = 74/212 (34%), Positives = 109/212 (51%), Gaps = 21/212 (9%)
Frame = +2
Query: 5 IKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPV 184
IK YGLPF + ++ +F PT L R+HIS LKVRPV
Sbjct: 230 IKLYGLPFKPHSYAARNKILQE----------LWFKKIPTELLVRSHISNPK-KLKVRPV 278
Query: 185 YAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSS 364
IF+ IE ML +PL Q RK C IMYGLETIRG IE +A +S F +DWS
Sbjct: 279 NNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMMEIESLATRFSNFMMIDWSK 338
Query: 365 YDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDEHK 496
+DQ +P + D++Y D++ +LI+++ GY + Y + +L+E
Sbjct: 339 FDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSFAAQARKLGVHGNSNLNEAP 398
Query: 497 -----LYHRMDNLLHFLHTWYNNMTFLLPDGY 577
++++NLL F++TW+ M ++ PDG+
Sbjct: 399 PETAIFANKVENLLKFINTWFKEMVYITPDGF 430
[12][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6EM35_9VIRU
Length = 663
Score = 125 bits (313), Expect = 3e-27
Identities = 77/214 (35%), Positives = 112/214 (52%), Gaps = 23/214 (10%)
Frame = +2
Query: 5 IKEYGLPF--NIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVR 178
IK YGLPF + +A ++T L +F PT L R+HIS LKVR
Sbjct: 230 IKLYGLPFKPHSYKARNQTLL------------ELWFKKIPTELLVRSHISNPK-KLKVR 276
Query: 179 PVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDW 358
PV IF+ IE ML +PL Q RK C IMYG ETIRG IE +A +S F +DW
Sbjct: 277 PVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGFETIRGGMMEIESLATRFSNFMMIDW 336
Query: 359 SSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDE 490
S +DQ +P + D++Y D++ +LI+I+ GY + Y + +L+E
Sbjct: 337 SKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHNYNDHVHSFAAQARKLGVHGNSNLNE 396
Query: 491 -----HKLYHRMDNLLHFLHTWYNNMTFLLPDGY 577
++++NLL F++TW+ M ++ PDG+
Sbjct: 397 APPEASVFANKVENLLKFINTWFKEMVYITPDGF 430
[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
annosum P-type partitivirus RepID=Q8QY51_9VIRU
Length = 734
Score = 97.1 bits (240), Expect = 9e-19
Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Frame = +2
Query: 119 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 298
PT+++ R+ ISK LKVRPVY +F+++E MLT L Q RKP CI++ ETIRG
Sbjct: 281 PTVMYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRG 339
Query: 299 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT--YEYPT 472
+ +I+ +++ F D+S +DQ P I ++ F+ +I ++ GYQ + Y
Sbjct: 340 GMHELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQ 399
Query: 473 YPDLDEHKLYHRMD-----------------------------NLLHFLHTWYNNMTFLL 565
Y D K Y +D N+L F+ WY M F+
Sbjct: 400 YA-YDFEKKYDNLDKSEPKFQEFAKKSNNLFPKHVVAFSFVIFNILSFIWWWYVFMVFIT 458
Query: 566 PDGY 577
PDGY
Sbjct: 459 PDGY 462
[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
Length = 576
Score = 79.7 bits (195), Expect = 1e-13
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Frame = +2
Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLET 289
Y F R H+ + D P KVR V+ ++ ELM +PL + AR P +++G ET
Sbjct: 202 YWNTAFARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYET 261
Query: 290 IRGSNRYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT 457
+ G + A D YST +LDWS +D+ + + +R + GY PT
Sbjct: 262 LTGGWSRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPT 321
Query: 458 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 574
YP PD + R++NL +++ + +LPDG
Sbjct: 322 ISYPNAPDTNP----DRLENLWNWMTDAILTVPLMLPDG 356
[15][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
RepID=B2CGP3_9VIRU
Length = 616
Score = 59.7 bits (143), Expect = 2e-07
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Frame = +2
Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 289
+P LL T+ I K+D P K+R ++ +II E ML + + PS +++G ET
Sbjct: 230 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 289
Query: 290 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 448
G ++ RD +F +LDWS +D+R ++ I YT R+ + + GY
Sbjct: 290 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 344
Query: 449 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDG 574
PT+ PT+P D K R++ L +L T N +LPDG
Sbjct: 345 VPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDG 385
[16][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
cryptic virus 1 RepID=D0EP81_9VIRU
Length = 559
Score = 59.3 bits (142), Expect = 2e-07
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Frame = +2
Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 289
+P LL T+ I K+D P K+R ++ +II E ML + + PS +++G ET
Sbjct: 174 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 233
Query: 290 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 448
G ++ RD +F +LDWS +D+R ++ I YT R+ + + GY
Sbjct: 234 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 288
Query: 449 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 574
PT+ PT+P D K L L + +LPDG
Sbjct: 289 VPTHSAPTHPQWDHTKAIRHERLWLWTLENLF-EAPIILPDG 329
[17][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
virus RepID=C0STM0_9VIRU
Length = 580
Score = 59.3 bits (142), Expect = 2e-07
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Frame = +2
Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETI 292
YP + T++ I P KVR ++ V + +++E M +PL R + +++G ET+
Sbjct: 199 YPINIHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETM 258
Query: 293 RGS----NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 457
G N + + SLDWS +D R L VI D+Y ++S N+GY PT
Sbjct: 259 LGGWYKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPT 318
Query: 458 YEYP---TYPDLDEHKLYHRMDNLLHF 529
+YP T+P H L+ M L F
Sbjct: 319 VDYPDSSTHPQ-KLHNLWDWMLTALKF 344
[18][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=Q4KUU4_9VIRU
Length = 616
Score = 58.5 bits (140), Expect = 4e-07
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Frame = +2
Query: 53 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568
I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383
Query: 569 DG 574
DG
Sbjct: 384 DG 385
[19][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=B2M1T3_9VIRU
Length = 616
Score = 58.5 bits (140), Expect = 4e-07
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Frame = +2
Query: 53 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568
I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383
Query: 569 DG 574
DG
Sbjct: 384 DG 385
[20][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R744_9VIRU
Length = 616
Score = 58.5 bits (140), Expect = 4e-07
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Frame = +2
Query: 53 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568
I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383
Query: 569 DG 574
DG
Sbjct: 384 DG 385
[21][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R742_9VIRU
Length = 616
Score = 58.5 bits (140), Expect = 4e-07
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Frame = +2
Query: 53 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568
I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383
Query: 569 DG 574
DG
Sbjct: 384 DG 385
[22][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R739_9VIRU
Length = 616
Score = 58.5 bits (140), Expect = 4e-07
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Frame = +2
Query: 53 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 226
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 227 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 394
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 395 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 568
I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383
Query: 569 DG 574
DG
Sbjct: 384 DG 385
[23][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
RepID=Q64FP0_WCCV1
Length = 616
Score = 57.0 bits (136), Expect = 1e-06
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
Frame = +2
Query: 86 IDEANSFFNDY--PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQAR 253
+++ FFN + P LL T+ I K++ P K+R ++ +II E M + I+
Sbjct: 218 LEQTGYFFNRFIFPMLLHTKTAIVKKNDPNKMRTIWGASKPWIIAETMFYWEYLAWIKHN 277
Query: 254 KPSCCIMYGLETIRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTD 412
+ +++G ET G + I R +F +LDWS +D+R ++ I YT
Sbjct: 278 PGATPMLWGYETFTGGWFRLNHELFCGLIQR---SFLTLDWSRFDKRAYFPLLRRILYT- 333
Query: 413 FLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDG 574
+++ + GY PT+ PT+P + + R++ L +L T N +LPDG
Sbjct: 334 -VKTFLTFEEGYVPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDG 385
[24][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
virus II RepID=Q7TDZ9_9VIRU
Length = 610
Score = 56.6 bits (135), Expect = 1e-06
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Frame = +2
Query: 116 YPTLLFTRNHI-SKRDGPL---KVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMY 277
Y F R HI K+ G L KVR V+ + EL+ +PL + + +++
Sbjct: 237 YWNTAFARQHIVEKKPGILAQPKVRLVFGAPFTLLTAELIFIWPLQTHLLLMQDFSPMLW 296
Query: 278 GLETIRGS-NRYIEQIARDYST---FFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHG 445
G ETI G R ++ T +LDWS +D+ + +T +R +G
Sbjct: 297 GYETILGGWYRLRGHLSGKIDTDKLVATLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNG 356
Query: 446 YQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 574
Y PT+ YP T D DE + R++NL +++ + L+PDG
Sbjct: 357 YHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDG 401
[25][TOP]
>UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus
partitivirus RepID=A2VA07_9VIRU
Length = 132
Score = 56.2 bits (134), Expect = 2e-06
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Frame = +2
Query: 122 TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETI 292
T L +R+H+ + D P K+R V+ V + +++E M + + + +++G ETI
Sbjct: 8 TYLHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETI 67
Query: 293 RGS-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 457
RG + I Q+ ++ S+ S DWS +D + L VI D++ D +S N GY+P+
Sbjct: 68 RGGWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123
[26][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
RepID=B8YNW9_9VIRU
Length = 616
Score = 53.9 bits (128), Expect = 9e-06
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Frame = +2
Query: 116 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 289
+P LL T+ I K + P K+R ++ +II E ML + I+ + +++G ET
Sbjct: 230 FPMLLHTKTAIVKHNDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPGTTPMLWGYET 289
Query: 290 IRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 448
G Y I +F +LDWS +D+R ++ I Y +RS + + GY
Sbjct: 290 FTGGWFRLNHQLYCGMIKH---SFLTLDWSRFDKRAYFPLLRRILYP--VRSFLTFDEGY 344
Query: 449 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDG 574
PT+ P +P + K R++ L +L T N +LPDG
Sbjct: 345 VPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDG 385