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[1][TOP] >UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus RepID=UPI0000163E03 Length = 824 Score = 344 bits (882), Expect = 3e-93 Identities = 168/192 (87%), Positives = 180/192 (93%) Frame = +1 Query: 1 PGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAF 180 P TNEAINCDYS FDGLLNAQVIECIA MIN+LYALSGESEVQQAQRYNMLMALVGRYAF Sbjct: 270 PKTNEAINCDYSGFDGLLNAQVIECIAKMINRLYALSGESEVQQAQRYNMLMALVGRYAF 329 Query: 181 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDN 360 VG +V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAPKPE+ RF Q VCL+VYGDDN Sbjct: 330 VGPEVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPKPERNRFNQVVCLLVYGDDN 389 Query: 361 LISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTG 540 LISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE+K FWELDFLKRKFLKLD G Sbjct: 390 LISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDNG 449 Query: 541 VIQAPLDMTAIF 576 ++QAPLD +AIF Sbjct: 450 IVQAPLDRSAIF 461 [2][TOP] >UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus RepID=POL1_BRSV Length = 2264 Score = 344 bits (882), Expect = 3e-93 Identities = 168/192 (87%), Positives = 180/192 (93%) Frame = +1 Query: 1 PGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAF 180 P TNEAINCDYS FDGLLNAQVIECIA MIN+LYALSGESEVQQAQRYNMLMALVGRYAF Sbjct: 1710 PKTNEAINCDYSGFDGLLNAQVIECIAKMINRLYALSGESEVQQAQRYNMLMALVGRYAF 1769 Query: 181 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDN 360 VG +V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAPKPE+ RF Q VCL+VYGDDN Sbjct: 1770 VGPEVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPKPERNRFNQVVCLLVYGDDN 1829 Query: 361 LISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTG 540 LISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE+K FWELDFLKRKFLKLD G Sbjct: 1830 LISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDNG 1889 Query: 541 VIQAPLDMTAIF 576 ++QAPLD +AIF Sbjct: 1890 IVQAPLDRSAIF 1901 [3][TOP] >UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08 Length = 824 Score = 339 bits (869), Expect = 1e-91 Identities = 165/192 (85%), Positives = 179/192 (93%) Frame = +1 Query: 1 PGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAF 180 P TNEAINCDYS FDGLLN Q+IECIA MIN+LYALSGES+VQQAQRYNMLMALVGRYAF Sbjct: 270 PKTNEAINCDYSGFDGLLNPQLIECIARMINRLYALSGESDVQQAQRYNMLMALVGRYAF 329 Query: 181 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDN 360 VGQ+V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF TVCL+VYGDDN Sbjct: 330 VGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPERNRFGSTVCLLVYGDDN 389 Query: 361 LISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTG 540 LISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE+K FWELDFLKRKFLKLD G Sbjct: 390 LISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDNG 449 Query: 541 VIQAPLDMTAIF 576 ++QAPLD +AIF Sbjct: 450 IVQAPLDRSAIF 461 [4][TOP] >UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus RepID=POL1_TBRVM Length = 2266 Score = 339 bits (869), Expect = 1e-91 Identities = 165/192 (85%), Positives = 179/192 (93%) Frame = +1 Query: 1 PGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAF 180 P TNEAINCDYS FDGLLN Q+IECIA MIN+LYALSGES+VQQAQRYNMLMALVGRYAF Sbjct: 1712 PKTNEAINCDYSGFDGLLNPQLIECIARMINRLYALSGESDVQQAQRYNMLMALVGRYAF 1771 Query: 181 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDN 360 VGQ+V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF TVCL+VYGDDN Sbjct: 1772 VGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPERNRFGSTVCLLVYGDDN 1831 Query: 361 LISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTG 540 LISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE+K FWELDFLKRKFLKLD G Sbjct: 1832 LISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDNG 1891 Query: 541 VIQAPLDMTAIF 576 ++QAPLD +AIF Sbjct: 1892 IVQAPLDRSAIF 1903 [5][TOP] >UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus RepID=UPI00017F0C90 Length = 826 Score = 283 bits (725), Expect = 5e-75 Identities = 142/191 (74%), Positives = 162/191 (84%), Gaps = 1/191 (0%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVG 186 TNEAINCDYS FDGLL Q++E +A MIN+LY SGESEV QAQR NM+MAL GRYA VG Sbjct: 270 TNEAINCDYSGFDGLLTPQLVEMMAKMINRLYLRSGESEVMQAQRLNMIMALCGRYALVG 329 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLI 366 +V+KVNCGLPSGFALTVV+NS+FNEILIRYAY+ LAP PEK F VCL+VYGDDNLI Sbjct: 330 TQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPEKNSFGINVCLLVYGDDNLI 389 Query: 367 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF-LKLDTGV 543 SV+P+ ASWF GEAIRVTLAEK++KITDGSDKDAPTIE+KPF ELDFLKRKF + + G Sbjct: 390 SVSPAVASWFTGEAIRVTLAEKRIKITDGSDKDAPTIEAKPFSELDFLKRKFYVHPEHGQ 449 Query: 544 IQAPLDMTAIF 576 + APLD +AIF Sbjct: 450 VWAPLDKSAIF 460 [6][TOP] >UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus RepID=POL1_GCMV Length = 2252 Score = 283 bits (725), Expect = 5e-75 Identities = 142/191 (74%), Positives = 162/191 (84%), Gaps = 1/191 (0%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVG 186 TNEAINCDYS FDGLL Q++E +A MIN+LY SGESEV QAQR NM+MAL GRYA VG Sbjct: 1696 TNEAINCDYSGFDGLLTPQLVEMMAKMINRLYLRSGESEVMQAQRLNMIMALCGRYALVG 1755 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLI 366 +V+KVNCGLPSGFALTVV+NS+FNEILIRYAY+ LAP PEK F VCL+VYGDDNLI Sbjct: 1756 TQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPEKNSFGINVCLLVYGDDNLI 1815 Query: 367 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF-LKLDTGV 543 SV+P+ ASWF GEAIRVTLAEK++KITDGSDKDAPTIE+KPF ELDFLKRKF + + G Sbjct: 1816 SVSPAVASWFTGEAIRVTLAEKRIKITDGSDKDAPTIEAKPFSELDFLKRKFYVHPEHGQ 1875 Query: 544 IQAPLDMTAIF 576 + APLD +AIF Sbjct: 1876 VWAPLDKSAIF 1886 [7][TOP] >UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus RepID=UPI00003FE52F Length = 846 Score = 234 bits (598), Expect = 3e-60 Identities = 117/190 (61%), Positives = 144/190 (75%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVG 186 ++ AINCDYS+FDGLLN+QV+ CIANMIN +Y E+ V + QRYNM+ AL GR A G Sbjct: 280 SDRAINCDYSSFDGLLNSQVVSCIANMINSMYHSPEETVVSKRQRYNMINALFGRLAITG 339 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLI 366 Q+V +V GLPSGFALTVV+NSVFNEIL+RY ++ L P++ F V L+VYGDDNL+ Sbjct: 340 QEVMRVRAGLPSGFALTVVINSVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNLM 399 Query: 367 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 546 S A +FNGE I+ TL +K V ITDGSDK AP I+ K ELDFLKR+FLKL+TGV+ Sbjct: 400 SCTDKIAIYFNGETIKETLKKKNVTITDGSDKTAPDIKWKTLGELDFLKRRFLKLETGVV 459 Query: 547 QAPLDMTAIF 576 QAPLD+TAIF Sbjct: 460 QAPLDLTAIF 469 [8][TOP] >UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus RepID=POL1_CNSV Length = 2336 Score = 234 bits (598), Expect = 3e-60 Identities = 117/190 (61%), Positives = 144/190 (75%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVG 186 ++ AINCDYS+FDGLLN+QV+ CIANMIN +Y E+ V + QRYNM+ AL GR A G Sbjct: 1770 SDRAINCDYSSFDGLLNSQVVSCIANMINSMYHSPEETVVSKRQRYNMINALFGRLAITG 1829 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLI 366 Q+V +V GLPSGFALTVV+NSVFNEIL+RY ++ L P++ F V L+VYGDDNL+ Sbjct: 1830 QEVMRVRAGLPSGFALTVVINSVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNLM 1889 Query: 367 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 546 S A +FNGE I+ TL +K V ITDGSDK AP I+ K ELDFLKR+FLKL+TGV+ Sbjct: 1890 SCTDKIAIYFNGETIKETLKKKNVTITDGSDKTAPDIKWKTLGELDFLKRRFLKLETGVV 1949 Query: 547 QAPLDMTAIF 576 QAPLD+TAIF Sbjct: 1950 QAPLDLTAIF 1959 [9][TOP] >UniRef100_UPI00003FE53F RNA-dependent RNA polymerase n=1 Tax=Tomato ringspot virus RepID=UPI00003FE53F Length = 711 Score = 201 bits (511), Expect = 3e-50 Identities = 102/187 (54%), Positives = 130/187 (69%) Frame = +1 Query: 16 AINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKV 195 A+NCDYS FDGLLN Q I N INKLY ++ R N+LMA+ GR++ GQ+V Sbjct: 281 ALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEHSIVRGNLLMAMYGRWSVCGQRV 335 Query: 196 FKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVA 375 F+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVYGDDNLIS+ Sbjct: 336 FEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIK 395 Query: 376 PSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQAP 555 P +FNGE I+ LA+ KV ITDGSDK++P + +KP +LDFLKR F G + AP Sbjct: 396 PDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAP 455 Query: 556 LDMTAIF 576 LD+ AI+ Sbjct: 456 LDLQAIY 462 [10][TOP] >UniRef100_Q9QRA7 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q9QRA7_9SECO Length = 985 Score = 201 bits (511), Expect = 3e-50 Identities = 102/187 (54%), Positives = 130/187 (69%) Frame = +1 Query: 16 AINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKV 195 A+NCDYS FDGLLN Q I N INKLY ++ R N+LMA+ GR++ GQ+V Sbjct: 555 ALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEHSIVRGNLLMAMYGRWSVCGQRV 609 Query: 196 FKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVA 375 F+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVYGDDNLIS+ Sbjct: 610 FEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIK 669 Query: 376 PSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQAP 555 P +FNGE I+ LA+ KV ITDGSDK++P + +KP +LDFLKR F G + AP Sbjct: 670 PDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAP 729 Query: 556 LDMTAIF 576 LD+ AI+ Sbjct: 730 LDLQAIY 736 [11][TOP] >UniRef100_P29150 RNA-directed RNA polymerase n=1 Tax=Tomato ringspot virus (ISOLATE RASPBERRY) RepID=POL1_TORVR Length = 2197 Score = 201 bits (511), Expect = 3e-50 Identities = 102/187 (54%), Positives = 130/187 (69%) Frame = +1 Query: 16 AINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKV 195 A+NCDYS FDGLLN Q I N INKLY ++ R N+LMA+ GR++ GQ+V Sbjct: 1767 ALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEHSIVRGNLLMAMYGRWSVCGQRV 1821 Query: 196 FKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVA 375 F+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVYGDDNLIS+ Sbjct: 1822 FEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIK 1881 Query: 376 PSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQAP 555 P +FNGE I+ LA+ KV ITDGSDK++P + +KP +LDFLKR F G + AP Sbjct: 1882 PDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAP 1941 Query: 556 LDMTAIF 576 LD+ AI+ Sbjct: 1942 LDLQAIY 1948 [12][TOP] >UniRef100_Q9QRA8 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q9QRA8_9SECO Length = 985 Score = 201 bits (510), Expect = 4e-50 Identities = 102/187 (54%), Positives = 129/187 (68%) Frame = +1 Query: 16 AINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKV 195 A+NCDYS FDGLLN Q I N INKLY ++ R N+LMA+ GR++ GQ+V Sbjct: 555 ALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEHSIVRGNLLMAMYGRWSVCGQRV 609 Query: 196 FKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVA 375 F+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVYGDDNLIS+ Sbjct: 610 FEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIK 669 Query: 376 PSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQAP 555 P +FNGE I+ LA KV ITDGSDK++P + +KP +LDFLKR F G + AP Sbjct: 670 PDTMKYFNGEQIKTILARYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAP 729 Query: 556 LDMTAIF 576 LD+ AI+ Sbjct: 730 LDLQAIY 736 [13][TOP] >UniRef100_Q9QRA6 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q9QRA6_9SECO Length = 985 Score = 200 bits (509), Expect = 6e-50 Identities = 102/187 (54%), Positives = 129/187 (68%) Frame = +1 Query: 16 AINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKV 195 A+NCDYS FDGLLN Q I N INKLY ++ R N+LMA+ GR++ GQ+V Sbjct: 555 ALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEHSIVRGNLLMAMYGRWSVCGQRV 609 Query: 196 FKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVA 375 F+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVYGDDNLIS+ Sbjct: 610 FEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIK 669 Query: 376 PSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQAP 555 P +FNGE I+ LA KV ITDGSDK++P + +KP +LDFLKR F G + AP Sbjct: 670 PDTMKYFNGEQIKTILANIKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAP 729 Query: 556 LDMTAIF 576 LD+ AI+ Sbjct: 730 LDLQAIY 736 [14][TOP] >UniRef100_Q9QRA9 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q9QRA9_9SECO Length = 985 Score = 199 bits (507), Expect = 1e-49 Identities = 102/187 (54%), Positives = 129/187 (68%) Frame = +1 Query: 16 AINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKV 195 A+NCDYS FDGLLN Q I N IN+LY ++ R N+LMA+ GR++ GQ+V Sbjct: 555 AMNCDYSRFDGLLNYQAYVHIVNFINRLY-----NDEHTIVRGNLLMAMYGRWSICGQRV 609 Query: 196 FKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVA 375 F+V G+PSG ALTV++NS+FNE+LIRY YR P+P F Q VCLIVYGDDNLISV Sbjct: 610 FEVRAGMPSGCALTVIINSLFNEMLIRYVYRVTVPRPLVNNFNQEVCLIVYGDDNLISVK 669 Query: 376 PSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQAP 555 P +FNG+ I+ LA+ KV ITDGSDK++P + +KP +LDFLKR F G + AP Sbjct: 670 PDTMKYFNGDRIKEVLAKFKVTITDGSDKNSPVLRAKPLKQLDFLKRGFKVQSDGRVLAP 729 Query: 556 LDMTAIF 576 LD+ AIF Sbjct: 730 LDLQAIF 736 [15][TOP] >UniRef100_Q155U1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q155U1_9SECO Length = 711 Score = 194 bits (493), Expect = 4e-48 Identities = 97/187 (51%), Positives = 129/187 (68%) Frame = +1 Query: 16 AINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKV 195 A+NCDYS FDGLLN Q I N IN+LY ++ R N+LMA+ GR++ GQ+V Sbjct: 281 ALNCDYSRFDGLLNYQAYVHIVNFINRLY-----NDEHSTVRGNLLMAMYGRWSVCGQRV 335 Query: 196 FKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVA 375 ++V G+PSG ALTV++NS+FNE+LI Y YR P+ F+Q VCLIVYGDDNLIS+ Sbjct: 336 YEVRAGMPSGCALTVIINSLFNELLIGYVYRVTVPRSLVNNFKQEVCLIVYGDDNLISIK 395 Query: 376 PSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQAP 555 P +FNGE I+ TLA+ ++ ITDGSDK++P + +KP +LDFLKR F G + AP Sbjct: 396 PDTMKYFNGEQIKSTLAKYRITITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAP 455 Query: 556 LDMTAIF 576 LD+ AI+ Sbjct: 456 LDLQAIY 462 [16][TOP] >UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus RepID=UPI0000163DCE Length = 707 Score = 191 bits (486), Expect = 3e-47 Identities = 97/187 (51%), Positives = 129/187 (68%) Frame = +1 Query: 16 AINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKV 195 AINCDY++FDGLL Q++E I MINK+Y SE + QR N+LM++V R + G +V Sbjct: 270 AINCDYASFDGLLTGQILEKIGTMINKMYI---GSEASKIQRLNLLMSIVNRKSICGARV 326 Query: 196 FKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVA 375 ++V G+PSG ALTV++NS+FNE LIR+ +R + RF Q V L++YGDDNLI+V Sbjct: 327 YEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGVPRERFSQYVTLLIYGDDNLIAVH 386 Query: 376 PSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQAP 555 P FNGE IR LA+ V ITDGSDK A IE KP +LDFLKR+F KL+ G + AP Sbjct: 387 PDYLPHFNGEIIRTRLADVNVIITDGSDKTAEKIEEKPLVQLDFLKRRFRKLNDGTVYAP 446 Query: 556 LDMTAIF 576 LD+ +++ Sbjct: 447 LDLASVY 453 [17][TOP] >UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus RepID=POL1_BRAV Length = 2094 Score = 191 bits (486), Expect = 3e-47 Identities = 97/187 (51%), Positives = 129/187 (68%) Frame = +1 Query: 16 AINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKV 195 AINCDY++FDGLL Q++E I MINK+Y SE + QR N+LM++V R + G +V Sbjct: 1657 AINCDYASFDGLLTGQILEKIGTMINKMYI---GSEASKIQRLNLLMSIVNRKSICGARV 1713 Query: 196 FKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVA 375 ++V G+PSG ALTV++NS+FNE LIR+ +R + RF Q V L++YGDDNLI+V Sbjct: 1714 YEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGVPRERFSQYVTLLIYGDDNLIAVH 1773 Query: 376 PSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQAP 555 P FNGE IR LA+ V ITDGSDK A IE KP +LDFLKR+F KL+ G + AP Sbjct: 1774 PDYLPHFNGEIIRTRLADVNVIITDGSDKTAEKIEEKPLVQLDFLKRRFRKLNDGTVYAP 1833 Query: 556 LDMTAIF 576 LD+ +++ Sbjct: 1834 LDLASVY 1840 [18][TOP] >UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus RepID=A2ID54_9SECO Length = 1916 Score = 189 bits (479), Expect = 2e-46 Identities = 93/190 (48%), Positives = 129/190 (67%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVG 186 + A+NCDYS+FDGL+ Q++ CI +MIN +Y G+S+ + R N+LMA+ R + G Sbjct: 1471 SENALNCDYSSFDGLMTGQMLSCIGDMINTMY---GDSQKSKNGRKNLLMAICNRKSLCG 1527 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLI 366 ++V G+PSG ALTV++NS+FNEIL+R Y+ + P + F + V L+VYGDDNLI Sbjct: 1528 ADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFNEYVTLLVYGDDNLI 1587 Query: 367 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 546 +V PS FNG+ I+ T+A+ +V ITDGSDK +PT+ KP LDFLKR F D G + Sbjct: 1588 AVDPSILEVFNGDVIKKTMAKWRVTITDGSDKLSPTLTEKPLLSLDFLKRGFKLADNGQV 1647 Query: 547 QAPLDMTAIF 576 APLD TAI+ Sbjct: 1648 YAPLDKTAIY 1657 [19][TOP] >UniRef100_Q88893 RNA-directed RNA polymerase n=1 Tax=Tobacco ringspot virus strain Bud Blight RepID=POL1_TRSVB Length = 2304 Score = 186 bits (473), Expect = 9e-46 Identities = 100/198 (50%), Positives = 131/198 (66%), Gaps = 11/198 (5%) Frame = +1 Query: 16 AINCDYSAFDGLLNAQVIECIANMINKLYALS-------GESEVQ----QAQRYNMLMAL 162 A NCDYS FDGL++ QV++ I M+NK Y+ + G+ E+ Q RYN+LM++ Sbjct: 1764 AYNCDYSKFDGLMSCQVLDAIGKMVNKCYSNANPNLKKKGKGELPGSPPQLARYNLLMSI 1823 Query: 163 VGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLI 342 GR +VF+V G+ G ALTV++NSVFNEILIRY Y+ + P PE RF+ V L+ Sbjct: 1824 FGRKCLARSQVFEVRGGIRRG-ALTVLLNSVFNEILIRYVYKTVIPSPEFNRFETFVTLV 1882 Query: 343 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF 522 VYGDDNLI+V PS F GE I+ TLA KK+ ITDGSDK +P +E+KP +LDFLKR F Sbjct: 1883 VYGDDNLIAVDPSMQKIFTGEVIKKTLARKKITITDGSDKLSPVLEAKPLAQLDFLKRSF 1942 Query: 523 LKLDTGVIQAPLDMTAIF 576 L D+G + LD T I+ Sbjct: 1943 LVSDSGQVMPALDRTCIY 1960 [20][TOP] >UniRef100_P29149 RNA-directed RNA polymerase n=1 Tax=Grapevine fanleaf virus RepID=POL1_GFLV Length = 2284 Score = 168 bits (425), Expect = 3e-40 Identities = 84/184 (45%), Positives = 120/184 (65%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 NCDY AFDGL+ Q++ IA+MIN Y V QR N+L+A+ GR + G +V+ Sbjct: 1732 NCDYKAFDGLITEQILSTIADMINAGY----RDPVGNRQRKNLLLAICGRLSICGNQVYA 1787 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPS 381 G+PSG ALTVV+NS+F E+L+RY ++K+ P K F + V LI YGDDN+ +VA S Sbjct: 1788 TEAGIPSGCALTVVLNSIFKELLMRYCFKKIVPPVYKECFDRCVVLITYGDDNVFTVAQS 1847 Query: 382 CASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQAPLD 561 +F G+A+++ +A+ V ITDG DK TI ++P EL+FLKR F++ G+I APL+ Sbjct: 1848 VMQYFTGDALKMQMAKLGVTITDGKDKSLSTIPARPLLELEFLKRGFVRSSGGMINAPLE 1907 Query: 562 MTAI 573 +I Sbjct: 1908 KLSI 1911 [21][TOP] >UniRef100_UPI0000163D09 RNA-dependent RNA polymerase n=1 Tax=Squash mosaic virus RepID=UPI0000163D09 Length = 711 Score = 166 bits (419), Expect = 2e-39 Identities = 89/189 (47%), Positives = 122/189 (64%), Gaps = 5/189 (2%) Frame = +1 Query: 25 CDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKV 204 CDY +FDGLL+ QV+ IA MIN+L G S+ Q R N+LMA RYA +V++V Sbjct: 280 CDYKSFDGLLSKQVMTVIATMINRL---CGGSQESQTMRMNLLMACCSRYAISKNEVWRV 336 Query: 205 NCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLIS 369 CG+PSGF LTV+ NS+FNEIL+RY YRK+ P+P F + V L+ YGDDNLIS Sbjct: 337 ECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGDDNLIS 396 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQ 549 V+ AS FNG ++ +A+ V ITDG DK +PT+E + DFLKR F KL+ + Sbjct: 397 VSHVVASVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLNGLIYD 455 Query: 550 APLDMTAIF 576 +P + ++++ Sbjct: 456 SPEEKSSLW 464 [22][TOP] >UniRef100_Q91PR6 Polyprotein n=1 Tax=Squash mosaic virus RepID=Q91PR6_9SECO Length = 1858 Score = 166 bits (419), Expect = 2e-39 Identities = 89/189 (47%), Positives = 122/189 (64%), Gaps = 5/189 (2%) Frame = +1 Query: 25 CDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKV 204 CDY +FDGLL+ QV+ IA MIN+L G S+ Q R N+LMA RYA +V++V Sbjct: 1427 CDYKSFDGLLSKQVMTVIATMINRL---CGGSQESQTMRMNLLMACCSRYAISKNEVWRV 1483 Query: 205 NCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLIS 369 CG+PSGF LTV+ NS+FNEIL+RY YRK+ P+P F + V L+ YGDDNLIS Sbjct: 1484 ECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGDDNLIS 1543 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQ 549 V+ AS FNG ++ +A+ V ITDG DK +PT+E + DFLKR F KL+ + Sbjct: 1544 VSHVVASVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLNGLIYD 1602 Query: 550 APLDMTAIF 576 +P + ++++ Sbjct: 1603 SPEEKSSLW 1611 [23][TOP] >UniRef100_UPI00003FE537 RNA-dependent RNA polymerase n=1 Tax=Arabis mosaic virus RepID=UPI00003FE537 Length = 825 Score = 165 bits (418), Expect = 2e-39 Identities = 83/184 (45%), Positives = 119/184 (64%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 NCDY FDGL+ Q++ +A MIN + + V QR N+LMA+ GR + G +V++ Sbjct: 272 NCDYKGFDGLITEQILAVVATMINAGF----RNPVSNQQRSNLLMAISGRLSICGSQVYE 327 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPS 381 G+PSG ALTVV+NS+FNE+L+RY Y+K+ P + F + V LI YGDDN+ +V+ S Sbjct: 328 TEAGIPSGCALTVVINSIFNELLMRYCYKKIVPPIYRECFDRCVVLITYGDDNVFTVSQS 387 Query: 382 CASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQAPLD 561 + F G+A++ +A V ITDG DK TI ++P EL+FLKR F K + G+I APL+ Sbjct: 388 IMTSFTGDALKAEMANLGVTITDGKDKSLATIPARPLLELEFLKRGFKKGNGGLIYAPLE 447 Query: 562 MTAI 573 +I Sbjct: 448 KLSI 451 [24][TOP] >UniRef100_Q6W8W5 RNA-directed RNA polymerase n=1 Tax=Arabis mosaic virus strain NW RepID=POL1_ARMVN Length = 2284 Score = 165 bits (418), Expect = 2e-39 Identities = 83/184 (45%), Positives = 119/184 (64%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 NCDY FDGL+ Q++ +A MIN + + V QR N+LMA+ GR + G +V++ Sbjct: 1731 NCDYKGFDGLITEQILAVVATMINAGF----RNPVSNQQRSNLLMAISGRLSICGSQVYE 1786 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPS 381 G+PSG ALTVV+NS+FNE+L+RY Y+K+ P + F + V LI YGDDN+ +V+ S Sbjct: 1787 TEAGIPSGCALTVVINSIFNELLMRYCYKKIVPPIYRECFDRCVVLITYGDDNVFTVSQS 1846 Query: 382 CASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQAPLD 561 + F G+A++ +A V ITDG DK TI ++P EL+FLKR F K + G+I APL+ Sbjct: 1847 IMTSFTGDALKAEMANLGVTITDGKDKSLATIPARPLLELEFLKRGFKKGNGGLIYAPLE 1906 Query: 562 MTAI 573 +I Sbjct: 1907 KLSI 1910 [25][TOP] >UniRef100_B1A4F8 Polyprotein 1 n=1 Tax=Squash mosaic virus RepID=B1A4F8_9SECO Length = 1858 Score = 165 bits (417), Expect = 3e-39 Identities = 89/189 (47%), Positives = 122/189 (64%), Gaps = 5/189 (2%) Frame = +1 Query: 25 CDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKV 204 CDY +FDGLL+ QV+ IA MIN+L G S+ Q R N+LMA RYA +V++V Sbjct: 1427 CDYKSFDGLLSKQVMTVIATMINRL---CGGSQESQTMRMNLLMACCSRYAISKNEVWRV 1483 Query: 205 NCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLIS 369 CG+PSGF LTV+ NS+FNEIL+RY YRK+ P+P F + V L+ YGDDNLIS Sbjct: 1484 ECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGDDNLIS 1543 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQ 549 V+ A+ FNG ++ +A+ V ITDG DK +PT+E + DFLKR F KL+ V Sbjct: 1544 VSHVVANVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLNGLVYD 1602 Query: 550 APLDMTAIF 576 +P + ++++ Sbjct: 1603 SPEEKSSLW 1611 [26][TOP] >UniRef100_B4YNP7 Polyprotein 1 n=1 Tax=Arabis mosaic virus RepID=B4YNP7_ARMV Length = 2285 Score = 162 bits (410), Expect = 2e-38 Identities = 81/184 (44%), Positives = 117/184 (63%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 NCDY FDGL+ Q++ +A MIN Y + V QR N+L+A+ GR + G +V++ Sbjct: 1733 NCDYKGFDGLITEQILAVVATMINTGY----RNPVSNQQRSNLLLAICGRLSICGNQVYE 1788 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPS 381 G+PSG ALTVV+NS+FNE+L+RY ++K+ P + F + V LI YGDDN+ +V+ S Sbjct: 1789 TEAGIPSGCALTVVINSIFNELLMRYCFKKIVPPVYRECFDRCVVLITYGDDNVFTVSQS 1848 Query: 382 CASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQAPLD 561 F G+A++ +A V ITDG DK TI ++P EL+FLKR K + G+I APL+ Sbjct: 1849 IMESFTGDALKAEMANVGVTITDGKDKSLATIPARPLLELEFLKRGIKKGNGGMIYAPLE 1908 Query: 562 MTAI 573 +I Sbjct: 1909 KLSI 1912 [27][TOP] >UniRef100_UPI0000163D14 RNA-dependent RNA polymerase n=1 Tax=Cowpea mosaic virus RepID=UPI0000163D14 Length = 711 Score = 158 bits (400), Expect = 3e-37 Identities = 86/194 (44%), Positives = 127/194 (65%), Gaps = 5/194 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ + CDYS+FDGLL+ QV++ IA+MIN+L GE +++ A+R N+LMA R A Sbjct: 274 NDVLCCDYSSFDGLLSKQVMDVIASMINEL--CGGEDQLKNARR-NLLMACCSRLAICKN 330 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL AP+ F + + L+ YGD Sbjct: 331 TVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLIGLVTYGD 390 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNLISV +F+G+ ++ +LA+ V ITDG DK + + + E DFLKR F++ Sbjct: 391 DNLISVNAVVTPYFDGKKLKQSLAQGGVTITDGKDKTSLELPFRRLEECDFLKRTFVQRS 450 Query: 535 TGVIQAPLDMTAIF 576 + + AP D +++ Sbjct: 451 STIWDAPEDKASLW 464 [28][TOP] >UniRef100_P03600 RNA-directed RNA polymerase n=1 Tax=Cowpea mosaic virus RepID=POL1_CPMV Length = 1866 Score = 158 bits (400), Expect = 3e-37 Identities = 86/194 (44%), Positives = 127/194 (65%), Gaps = 5/194 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ + CDYS+FDGLL+ QV++ IA+MIN+L GE +++ A+R N+LMA R A Sbjct: 1429 NDVLCCDYSSFDGLLSKQVMDVIASMINEL--CGGEDQLKNARR-NLLMACCSRLAICKN 1485 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL AP+ F + + L+ YGD Sbjct: 1486 TVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLIGLVTYGD 1545 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNLISV +F+G+ ++ +LA+ V ITDG DK + + + E DFLKR F++ Sbjct: 1546 DNLISVNAVVTPYFDGKKLKQSLAQGGVTITDGKDKTSLELPFRRLEECDFLKRTFVQRS 1605 Query: 535 TGVIQAPLDMTAIF 576 + + AP D +++ Sbjct: 1606 STIWDAPEDKASLW 1619 [29][TOP] >UniRef100_Q6W8W4 RNA-directed RNA polymerase n=1 Tax=Raspberry ringspot virus strain cherry RepID=POL1_RRVC Length = 2367 Score = 157 bits (397), Expect = 6e-37 Identities = 84/186 (45%), Positives = 122/186 (65%), Gaps = 2/186 (1%) Frame = +1 Query: 25 CDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKV 204 CDYS FDGL+ Q++ I N+ +++ SG + Q R N+LM + R + G +V++V Sbjct: 1837 CDYSKFDGLMTPQIVHAITNIYERMF--SGNDGMSQF-RQNLLMGICNRISICGSQVYRV 1893 Query: 205 NCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSC 384 G+PSGFALTV NS+FNEIL+R AYR L P+ E+ F V LIVYGDDN++ + P+ Sbjct: 1894 EAGMPSGFALTVDFNSIFNEILVRCAYRSLVPEIERPFFSNNVVLIVYGDDNVLGIHPNI 1953 Query: 385 ASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPFWELDFLKRKFLK-LDTGVIQAPL 558 S FNG AI+ + E+ +KITDG+DK +P I ++P + +FLKR + K G+ +APL Sbjct: 1954 ESAFNGNAIKAYMKEELGIKITDGADKLSPVICARPLEQCEFLKRTWRKDRQYGLYRAPL 2013 Query: 559 DMTAIF 576 T+I+ Sbjct: 2014 VETSIY 2019 [30][TOP] >UniRef100_Q24M90 Polyprotein 1 n=1 Tax=Raspberry ringspot virus RepID=Q24M90_9SECO Length = 2366 Score = 156 bits (395), Expect = 1e-36 Identities = 83/186 (44%), Positives = 121/186 (65%), Gaps = 2/186 (1%) Frame = +1 Query: 25 CDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKV 204 CDYS FDGL+ Q++ I + +++ SG+ + Q R N+LM + R + G +V++V Sbjct: 1836 CDYSKFDGLMTPQIVHAITGIYERMF--SGKDGMSQF-RQNLLMGICNRISICGSQVYRV 1892 Query: 205 NCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSC 384 G+PSGFALTV NS+FNEIL+R AYR L P E+ F V LIVYGDDN++ + P+ Sbjct: 1893 EAGMPSGFALTVDFNSIFNEILVRCAYRSLVPDIERPFFSNNVVLIVYGDDNVLGIHPNI 1952 Query: 385 ASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPFWELDFLKRKFLK-LDTGVIQAPL 558 S FNG I+ + E+ +KITDG+DK +P I+++P + +FLKR + K G+ +APL Sbjct: 1953 ESVFNGNTIKAYMKEELGIKITDGADKLSPVIDARPLEQCEFLKRTWRKDRQYGLYRAPL 2012 Query: 559 DMTAIF 576 T+IF Sbjct: 2013 VETSIF 2018 [31][TOP] >UniRef100_Q02941 RNA-directed RNA polymerase (Fragment) n=1 Tax=Andean potato mottle virus RepID=POL1_APMV Length = 729 Score = 154 bits (388), Expect = 6e-36 Identities = 81/194 (41%), Positives = 126/194 (64%), Gaps = 5/194 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS+FDGL+++QV+ CIA+ +N + G+ +++ QR N+LMA R++ V Sbjct: 299 NSILCCDYSSFDGLMSSQVMSCIADTMNDF--MGGDVSLKR-QRKNLLMACCSRFSVVKG 355 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK----PEKCR-FQQTVCLIVYGD 354 V++V G+PSGF LTVV+N +FNE+L+RY ++K+ + P +C F + +VYGD Sbjct: 356 NVWRVEGGIPSGFPLTVVMNGIFNELLVRYCFKKIMREGGATPLECSAFDSYIRFVVYGD 415 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNLISV+P FNG+ ++ +A V ITDG DK PT+E +P + DFLKR F++ Sbjct: 416 DNLISVSPVIHDKFNGKLLKECMARFGVTITDGKDKTLPTLEFRPLEDCDFLKRGFIQRS 475 Query: 535 TGVIQAPLDMTAIF 576 V AP + ++++ Sbjct: 476 ELVWDAPEERSSLY 489 [32][TOP] >UniRef100_O37086 RNA1 polyprotein n=1 Tax=Peach rosette mosaic virus RepID=O37086_9SECO Length = 2150 Score = 150 bits (379), Expect = 7e-35 Identities = 78/190 (41%), Positives = 117/190 (61%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVG 186 ++ +NCDYS FDGL++ Q+ + Q + N+L+ +GR + G Sbjct: 1705 SDTGLNCDYSKFDGLISHQISR---GWLQPSTVFLETVRKQILRVGNLLLMFIGRRSICG 1761 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLI 366 ++V+ V G+PSG ALTVV+NS+FNEILIRY YRK+ P P F + V L+VYGDDNL+ Sbjct: 1762 RQVYMVRGGMPSGCALTVVINSIFNEILIRYVYRKVTPAPACNFFNKYVRLMVYGDDNLL 1821 Query: 367 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 546 ++ +F+G I+ +A + ITDG+DK + T+E KP L+FLKR F + G++ Sbjct: 1822 TIKEEVIPFFDGPVIKREMASVGITITDGTDKSSLTLERKPLASLEFLKRGFRVQENGLV 1881 Query: 547 QAPLDMTAIF 576 APLD T+++ Sbjct: 1882 VAPLDKTSMY 1891 [33][TOP] >UniRef100_UPI0000163D04 RNA-dependent RNA polymerase n=1 Tax=Red clover mottle virus RepID=UPI0000163D04 Length = 713 Score = 149 bits (376), Expect = 2e-34 Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 5/194 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ + CDYS+FDGLL+ Q++E +A+MIN+ G + A+R N+LMA R A Sbjct: 275 NDILCCDYSSFDGLLSKQIMEMMADMINRF---CGGGTLICAKRKNLLMACCSRLAISRD 331 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V+++ CG+PSGF LTV+ NS+FNEIL+RY Y+ L AP F+ + ++ YGD Sbjct: 332 SVWRIECGIPSGFPLTVICNSIFNEILVRYHYKLLLQEHNAPNMYVQSFKNLISMVTYGD 391 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNLISV +F+G ++ +A + ITDG DK + T+E + + DFLKR FLK Sbjct: 392 DNLISVNAVVKPYFDGTKLKQAMARNGIIITDGKDKTSATLEFRRLEDCDFLKRGFLKRS 451 Query: 535 TGVIQAPLDMTAIF 576 + + AP + +++ Sbjct: 452 SVLWDAPEEKASLW 465 [34][TOP] >UniRef100_P35930 RNA-directed RNA polymerase n=1 Tax=Red clover mottle virus RepID=POL1_RCMV Length = 1864 Score = 149 bits (376), Expect = 2e-34 Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 5/194 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ + CDYS+FDGLL+ Q++E +A+MIN+ G + A+R N+LMA R A Sbjct: 1426 NDILCCDYSSFDGLLSKQIMEMMADMINRF---CGGGTLICAKRKNLLMACCSRLAISRD 1482 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V+++ CG+PSGF LTV+ NS+FNEIL+RY Y+ L AP F+ + ++ YGD Sbjct: 1483 SVWRIECGIPSGFPLTVICNSIFNEILVRYHYKLLLQEHNAPNMYVQSFKNLISMVTYGD 1542 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNLISV +F+G ++ +A + ITDG DK + T+E + + DFLKR FLK Sbjct: 1543 DNLISVNAVVKPYFDGTKLKQAMARNGIIITDGKDKTSATLEFRRLEDCDFLKRGFLKRS 1602 Query: 535 TGVIQAPLDMTAIF 576 + + AP + +++ Sbjct: 1603 SVLWDAPEEKASLW 1616 [35][TOP] >UniRef100_Q2TCK2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Radish mosaic virus RepID=Q2TCK2_9SECO Length = 709 Score = 149 bits (375), Expect = 2e-34 Identities = 76/176 (43%), Positives = 114/176 (64%), Gaps = 5/176 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS+FDGLL+ QV++ +++MIN + G SE + +R ++LMA RYA Sbjct: 277 NNILCCDYSSFDGLLSKQVMKAMSDMIN---SFCGGSESSKRKREHLLMACCSRYAICKN 333 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V ++VYGD Sbjct: 334 SVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKVPDMVSVSFDEYVSMVVYGD 393 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF 522 DNL+SV+ +F+G+ ++ LA ++ ITDG DK +P ++ + + DFLKR F Sbjct: 394 DNLLSVSEVIKPYFDGKRLKEFLATLRITITDGKDKTSPFLQFRCLEDCDFLKRGF 449 [36][TOP] >UniRef100_C0IQ96 Polyprotein n=1 Tax=Radish mosaic virus RepID=C0IQ96_9SECO Length = 1853 Score = 149 bits (375), Expect = 2e-34 Identities = 76/176 (43%), Positives = 114/176 (64%), Gaps = 5/176 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS+FDGLL+ QV++ +++MIN + G SE + +R ++LMA RYA Sbjct: 1421 NNILCCDYSSFDGLLSKQVMKAMSDMIN---SFCGGSESSKRKREHLLMACCSRYAICKN 1477 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V ++VYGD Sbjct: 1478 SVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKVPDMVSVSFDEYVSMVVYGD 1537 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF 522 DNL+SV+ +F+G+ ++ LA ++ ITDG DK +P ++ + + DFLKR F Sbjct: 1538 DNLLSVSEVIKPYFDGKRLKEFLATLRITITDGKDKTSPFLQFRCLEDCDFLKRGF 1593 [37][TOP] >UniRef100_Q06RG7 Polymerase (Fragment) n=1 Tax=Turnip ringspot virus RepID=Q06RG7_9SECO Length = 396 Score = 147 bits (371), Expect = 6e-34 Identities = 78/183 (42%), Positives = 117/183 (63%), Gaps = 5/183 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS+FDGLL+ QV+ +A+MIN G++ +++ +R N+LMA RYA Sbjct: 76 NNVLCCDYSSFDGLLSKQVMTAMASMINSF--CGGDTSIKR-KRENLLMACCSRYAICKS 132 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGD 354 V++V CG+PSGF LTV+ NS+FNEILIRY+++ + K + F + V ++ YGD Sbjct: 133 DVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGD 192 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLKR F K Sbjct: 193 DNLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDK 252 Query: 535 TGV 543 G+ Sbjct: 253 NGI 255 [38][TOP] >UniRef100_C9WI17 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C9WI17_9SECO Length = 1857 Score = 147 bits (371), Expect = 6e-34 Identities = 78/183 (42%), Positives = 117/183 (63%), Gaps = 5/183 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS+FDGLL+ QV+ +A+MIN G++ +++ +R N+LMA RYA Sbjct: 1420 NNVLCCDYSSFDGLLSKQVMTAMASMINSF--CGGDTSIKR-KRENLLMACCSRYAICKS 1476 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGD 354 V++V CG+PSGF LTV+ NS+FNEILIRY+++ + K + F + V ++ YGD Sbjct: 1477 DVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGD 1536 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLKR F K Sbjct: 1537 DNLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDK 1596 Query: 535 TGV 543 G+ Sbjct: 1597 NGI 1599 [39][TOP] >UniRef100_C7SW00 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C7SW00_9SECO Length = 1860 Score = 147 bits (371), Expect = 6e-34 Identities = 78/183 (42%), Positives = 117/183 (63%), Gaps = 5/183 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS+FDGLL+ QV+ +A+MIN G++ +++ +R N+LMA RYA Sbjct: 1423 NNVLCCDYSSFDGLLSKQVMAAMASMINSF--CGGDTSIKR-KRENLLMACCSRYAICKS 1479 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGD 354 V++V CG+PSGF LTV+ NS+FNEILIRY+++ + K + F + V ++ YGD Sbjct: 1480 DVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGD 1539 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLKR F K Sbjct: 1540 DNLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDK 1599 Query: 535 TGV 543 G+ Sbjct: 1600 NGI 1602 [40][TOP] >UniRef100_Q3L2Z2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z2_9SECO Length = 1851 Score = 147 bits (370), Expect = 8e-34 Identities = 80/194 (41%), Positives = 117/194 (60%), Gaps = 5/194 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ + CDY++FDGL+ QV+ +A MIN +L G E +R ++L+A R A + Sbjct: 1415 NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKLMRERTHLLLACCSRMAICKK 1471 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ + L VYGD Sbjct: 1472 NVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFISLCVYGD 1531 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNLISV +F+G ++ LA + ITDG DK + T++ + E DFLKR F ++ Sbjct: 1532 DNLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMS 1591 Query: 535 TGVIQAPLDMTAIF 576 + AP D +++ Sbjct: 1592 NVLWVAPEDKASLW 1605 [41][TOP] >UniRef100_Q8JUF2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF2_9SECO Length = 1851 Score = 146 bits (369), Expect = 1e-33 Identities = 80/194 (41%), Positives = 117/194 (60%), Gaps = 5/194 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ + CDY++FDGL+ QV+ +A MIN +L G E +R ++L+A R A + Sbjct: 1415 NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKLMRERTHLLLACCSRMAICKK 1471 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ + L VYGD Sbjct: 1472 DVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFISLCVYGD 1531 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNLISV +F+G ++ LA + ITDG DK + T++ + E DFLKR F ++ Sbjct: 1532 DNLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMS 1591 Query: 535 TGVIQAPLDMTAIF 576 + AP D +++ Sbjct: 1592 NVLWVAPEDKASLW 1605 [42][TOP] >UniRef100_A7M6L1 Polyprotein n=1 Tax=Radish mosaic virus RepID=A7M6L1_9SECO Length = 1853 Score = 145 bits (367), Expect = 2e-33 Identities = 76/176 (43%), Positives = 112/176 (63%), Gaps = 5/176 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS+FDGLL+ QV++ +++MIN G SE + +R ++LMA RYA Sbjct: 1421 NNILCCDYSSFDGLLSKQVMKAMSDMINNF---CGGSESSKRKREHLLMACCSRYAICKN 1477 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V ++VYGD Sbjct: 1478 TVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKIPDMIPVSFDEYVSMVVYGD 1537 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF 522 DNL+SV+ +F+G+ ++ LA + ITDG DK +P ++ + + DFLKR F Sbjct: 1538 DNLLSVSEVIKPYFDGKRLKDFLATLHITITDGKDKTSPFLQFRRLEDCDFLKRGF 1593 [43][TOP] >UniRef100_D0E0G9 Polyprotein n=1 Tax=Turnip ringspot virus RepID=D0E0G9_9SECO Length = 1860 Score = 145 bits (366), Expect = 2e-33 Identities = 79/182 (43%), Positives = 116/182 (63%), Gaps = 5/182 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS+FDGLL+ QV+ +A+MIN G+S +++ +R N+LMA RYA Sbjct: 1423 NNILCCDYSSFDGLLSKQVMAAMASMINSF--CGGDSSIKK-KRENLLMACCSRYAICKS 1479 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V++V CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V ++ YGD Sbjct: 1480 TVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMREQKVPDLIPISFDKYVGMVTYGD 1539 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLKR F K Sbjct: 1540 DNLLSVSEVVKPFFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFKKDR 1599 Query: 535 TG 540 +G Sbjct: 1600 SG 1601 [44][TOP] >UniRef100_Q8JUF5 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF5_9SECO Length = 1851 Score = 145 bits (365), Expect = 3e-33 Identities = 80/194 (41%), Positives = 117/194 (60%), Gaps = 5/194 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ + CDY++FDGL+ QV+ +A MIN +L G E +R ++L+A R A + Sbjct: 1415 NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKLMRERTHLLLACCSRMAICKK 1471 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ V L VYGD Sbjct: 1472 DVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFVSLCVYGD 1531 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNLISV +F+G ++ LA + ITDG DK + T++ + + DFLKR F ++ Sbjct: 1532 DNLISVHEYVKPYFSGSKLKSFLAGHNITITDGIDKTSATLQFRKLADCDFLKRNFKQMS 1591 Query: 535 TGVIQAPLDMTAIF 576 + AP D +++ Sbjct: 1592 NVLWVAPEDKASLW 1605 [45][TOP] >UniRef100_B2KL92 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Turnip ringspot virus RepID=B2KL92_9SECO Length = 712 Score = 144 bits (363), Expect = 5e-33 Identities = 78/182 (42%), Positives = 116/182 (63%), Gaps = 5/182 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS+FDGLL+ QV+ +A+MIN G++ +++ +R N+LMA RYA Sbjct: 275 NNILCCDYSSFDGLLSKQVMAAMASMINSF--CGGDTSIKK-KRENLLMACCSRYAICKS 331 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V++V CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V ++ YGD Sbjct: 332 TVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMREQKVPDLIPISFDKYVGMVTYGD 391 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLKR F K Sbjct: 392 DNLLSVSEVVKPFFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFKKDR 451 Query: 535 TG 540 +G Sbjct: 452 SG 453 [46][TOP] >UniRef100_UPI0000163CF4 putative RNA dependent RNA polymerase n=1 Tax=Bean pod mottle virus RepID=UPI0000163CF4 Length = 710 Score = 144 bits (362), Expect = 6e-33 Identities = 78/194 (40%), Positives = 116/194 (59%), Gaps = 5/194 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ + CDY++F GL+ QV+ +A MIN +L G E +R ++L+A R A + Sbjct: 274 NDILCCDYASFSGLITKQVMSKMAEMIN---SLCGGDEKLMRERTHLLLACCSRMAICKK 330 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 +++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ + L VYGD Sbjct: 331 DIWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFRNFISLCVYGD 390 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNLISV +F+G ++ LA + ITDG DK + T++ + E DFLKR F ++ Sbjct: 391 DNLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMS 450 Query: 535 TGVIQAPLDMTAIF 576 + AP D +++ Sbjct: 451 NVLWVAPEDKASLW 464 [47][TOP] >UniRef100_B6ZKN4 RNA1-polyprotein n=1 Tax=Radish mosaic virus RepID=B6ZKN4_9SECO Length = 1853 Score = 144 bits (362), Expect = 6e-33 Identities = 75/176 (42%), Positives = 111/176 (63%), Gaps = 5/176 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS+FDGLL+ QV++ +++MIN G +E + +R ++LMA RYA Sbjct: 1421 NNILCCDYSSFDGLLSKQVMKAMSDMINNF---CGGNESSKRKREHLLMACCSRYAICKN 1477 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V ++VYGD Sbjct: 1478 TVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKIPDMISVSFDEYVSMVVYGD 1537 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF 522 DNL+SV +F+G+ ++ LA + ITDG DK +P ++ + + DFLKR F Sbjct: 1538 DNLLSVNEVIKPYFDGKRLKEFLATLHITITDGKDKTSPFLQFRCLEDCDFLKRGF 1593 [48][TOP] >UniRef100_Q9YJU5 RNA-directed RNA polymerase n=1 Tax=Bean-pod mottle virus (strain Kentucky G7) RepID=POL1_BPMV Length = 1850 Score = 144 bits (362), Expect = 6e-33 Identities = 78/194 (40%), Positives = 116/194 (59%), Gaps = 5/194 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ + CDY++F GL+ QV+ +A MIN +L G E +R ++L+A R A + Sbjct: 1414 NDILCCDYASFSGLITKQVMSKMAEMIN---SLCGGDEKLMRERTHLLLACCSRMAICKK 1470 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 +++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ + L VYGD Sbjct: 1471 DIWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFRNFISLCVYGD 1530 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DNLISV +F+G ++ LA + ITDG DK + T++ + E DFLKR F ++ Sbjct: 1531 DNLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMS 1590 Query: 535 TGVIQAPLDMTAIF 576 + AP D +++ Sbjct: 1591 NVLWVAPEDKASLW 1604 [49][TOP] >UniRef100_Q3L2Z1 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z1_9SECO Length = 1851 Score = 143 bits (361), Expect = 8e-33 Identities = 79/194 (40%), Positives = 116/194 (59%), Gaps = 5/194 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ + CDY++FDGL+ QV+ +A MIN +L G E +R ++L+A R A + Sbjct: 1415 NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKLMRERTHLLLACCSRMAICKK 1471 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ V L VYGD Sbjct: 1472 DVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFVSLCVYGD 1531 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 534 DN ISV +F+G ++ LA + ITDG DK + T++ + + DFLKR F ++ Sbjct: 1532 DNFISVHEYVKPYFSGSKLKSFLAGHNITITDGIDKTSATLQFRKLADCDFLKRNFKQMS 1591 Query: 535 TGVIQAPLDMTAIF 576 + AP D +++ Sbjct: 1592 NVLWVAPEDKASLW 1605 [50][TOP] >UniRef100_UPI0000163CFC RNA-dependent RNA polymerase n=1 Tax=Cowpea severe mosaic virus RepID=UPI0000163CFC Length = 712 Score = 141 bits (355), Expect = 4e-32 Identities = 77/178 (43%), Positives = 108/178 (60%), Gaps = 5/178 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS+FDGLL QV+ ++ MIN+L G S ++Q QR N+LMA RYA Sbjct: 273 NNILCCDYSSFDGLLTKQVMHLMSEMINEL--CGGSSRLKQ-QRTNLLMACCSRYALCKG 329 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 +V++V CG+PSGF LTV+ NS+FNE+L+RY+Y K+ P F V ++ YGD Sbjct: 330 EVWRVECGIPSGFPLTVICNSIFNELLVRYSYIKICQQARVPATITYGFSTFVKMVTYGD 389 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 528 DNL+SV + F+G ++ L + ITDG DK +P + + + DFLKR F K Sbjct: 390 DNLLSVQSAITHVFDGTKLKEFLKLNGITITDGKDKTSPVLNFRNLEDCDFLKRGFKK 447 [51][TOP] >UniRef100_P36312 RNA-directed RNA polymerase n=1 Tax=Cowpea severe mosaic virus (strain DG) RepID=POL1_CPSMV Length = 1858 Score = 141 bits (355), Expect = 4e-32 Identities = 77/178 (43%), Positives = 108/178 (60%), Gaps = 5/178 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS+FDGLL QV+ ++ MIN+L G S ++Q QR N+LMA RYA Sbjct: 1419 NNILCCDYSSFDGLLTKQVMHLMSEMINEL--CGGSSRLKQ-QRTNLLMACCSRYALCKG 1475 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 +V++V CG+PSGF LTV+ NS+FNE+L+RY+Y K+ P F V ++ YGD Sbjct: 1476 EVWRVECGIPSGFPLTVICNSIFNELLVRYSYIKICQQARVPATITYGFSTFVKMVTYGD 1535 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 528 DNL+SV + F+G ++ L + ITDG DK +P + + + DFLKR F K Sbjct: 1536 DNLLSVQSAITHVFDGTKLKEFLKLNGITITDGKDKTSPVLNFRNLEDCDFLKRGFKK 1593 [52][TOP] >UniRef100_UPI0000231CC7 RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 1 RepID=UPI0000231CC7 Length = 699 Score = 134 bits (338), Expect = 4e-30 Identities = 74/173 (42%), Positives = 104/173 (60%), Gaps = 2/173 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L ++ IA M + + GE+ ++ Q N+++A RYA G+ Sbjct: 274 NSILCCDYSRFDGFLPKCIMVKIAEMFSNIV---GETGAEREQTKNLMLACCSRYAICGR 330 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+VNS+ NEILI+YAY K R F V ++VYGDDNL Sbjct: 331 VLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTYVAMVVYGDDNL 390 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF 522 ISV+ + +S FNG + + +K+TDG DK IE + + DFLKRKF Sbjct: 391 ISVSEAISSKFNGNFLVNFMCNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKF 443 [53][TOP] >UniRef100_Q76L40 Polyprotein n=1 Tax=Broad bean wilt virus 1 RepID=Q76L40_BBWV1 Length = 1842 Score = 134 bits (338), Expect = 4e-30 Identities = 74/173 (42%), Positives = 104/173 (60%), Gaps = 2/173 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L ++ IA M + + GE+ ++ Q N+++A RYA G+ Sbjct: 1417 NSILCCDYSRFDGFLPKCIMVKIAEMFSNIV---GETGAEREQTKNLMLACCSRYAICGR 1473 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+VNS+ NEILI+YAY K R F V ++VYGDDNL Sbjct: 1474 VLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTYVAMVVYGDDNL 1533 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF 522 ISV+ + +S FNG + + +K+TDG DK IE + + DFLKRKF Sbjct: 1534 ISVSEAISSKFNGNFLVNFMCNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKF 1586 [54][TOP] >UniRef100_Q3MKX9 Polyprotein 1 n=1 Tax=Broad bean wilt virus 1 RepID=Q3MKX9_BBWV1 Length = 1842 Score = 132 bits (332), Expect = 2e-29 Identities = 75/173 (43%), Positives = 103/173 (59%), Gaps = 2/173 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L ++ IA M + + +GES + Q N+++A RYA G+ Sbjct: 1417 NSILCCDYSRFDGFLPKCIMVKIAEMFSNVVGETGES---REQTKNLMLACCSRYAICGR 1473 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+VNS+ NEILI+YAY K R F V + VYGDDNL Sbjct: 1474 VLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTHVAMAVYGDDNL 1533 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF 522 ISV+ + +S FNG + +A +K+TDG DK IE + DFLKR+F Sbjct: 1534 ISVSEAISSRFNGNFLVNFMANLGIKVTDGVDKTKIGIEFRTIENCDFLKRRF 1586 [55][TOP] >UniRef100_UPI000180D482 RNA-dependent RNA polymerase n=1 Tax=Mikania micrantha mosaic virus RepID=UPI000180D482 Length = 474 Score = 130 bits (327), Expect = 7e-29 Identities = 74/191 (38%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L ++ I +I + G+++ + Q N+L+A GRYA + Sbjct: 238 NNILCCDYSRFDGFLPKCIMLKIGQLIG---SFMGKNDEEVTQICNLLLACTGRYAICEK 294 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+VNS+ NEIL++YAYR R F V L+VYGDDNL Sbjct: 295 LLYRVENGIPSGFPLTVIVNSILNEILVKYAYRMCFADNPMIRESFDTHVALVVYGDDNL 354 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 543 ISV+ + +S FNGE + + +TDG DK I + + DFLKR F L G Sbjct: 355 ISVSDAISSKFNGEFLVDFFLRLSITVTDGVDKTKQGISFRKLTDCDFLKRNFKVLPDGE 414 Query: 544 IQAPLDMTAIF 576 P+ +++ Sbjct: 415 WVGPMSRESLW 425 [56][TOP] >UniRef100_B5L2C4 Polyprotein n=1 Tax=Mikania micrantha mosaic virus RepID=B5L2C4_9SECO Length = 1853 Score = 130 bits (327), Expect = 7e-29 Identities = 74/191 (38%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L ++ I +I + G+++ + Q N+L+A GRYA + Sbjct: 1423 NNILCCDYSRFDGFLPKCIMLKIGQLIG---SFMGKNDEEVTQICNLLLACTGRYAICEK 1479 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+VNS+ NEIL++YAYR R F V L+VYGDDNL Sbjct: 1480 LLYRVENGIPSGFPLTVIVNSILNEILVKYAYRMCFADNPMIRESFDTHVALVVYGDDNL 1539 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 543 ISV+ + +S FNGE + + +TDG DK I + + DFLKR F L G Sbjct: 1540 ISVSDAISSKFNGEFLVDFFLRLSITVTDGVDKTKQGISFRKLTDCDFLKRNFKVLPDGE 1599 Query: 544 IQAPLDMTAIF 576 P+ +++ Sbjct: 1600 WVGPMSRESLW 1610 [57][TOP] >UniRef100_Q9YM10 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9YM10_9SECO Length = 1870 Score = 130 bits (326), Expect = 1e-28 Identities = 74/191 (38%), Positives = 110/191 (57%), Gaps = 2/191 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L ++ I NMI +L + EV +AQ N+++A RYA + Sbjct: 1445 NNILCCDYSRFDGFLPKCIMNEIGNMIARLMKVD---EVSRAQIKNLMLACTSRYAMCNR 1501 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNL Sbjct: 1502 VLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNL 1561 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 543 ISV+ + +S F+G + + +K+TDG DK IE + DFLKR F G Sbjct: 1562 ISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGT 1621 Query: 544 IQAPLDMTAIF 576 ++P+ +++ Sbjct: 1622 WRSPMSKESLW 1632 [58][TOP] >UniRef100_O12662 RNA polymerase n=1 Tax=Broad bean wilt virus 2 RepID=O12662_9SECO Length = 280 Score = 129 bits (325), Expect = 1e-28 Identities = 74/191 (38%), Positives = 110/191 (57%), Gaps = 2/191 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L ++ I NMI +L + EV +AQ N+++A RYA + Sbjct: 50 NNILCCDYSRFDGFLPKCIMNEIGNMIARLMKVD---EVSKAQIKNLMLACTSRYAMCNR 106 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNL Sbjct: 107 VLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNL 166 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 543 ISV+ + +S F+G + + +K+TDG DK IE + DFLKR F G Sbjct: 167 ISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGT 226 Query: 544 IQAPLDMTAIF 576 ++P+ +++ Sbjct: 227 WRSPMSKESLW 237 [59][TOP] >UniRef100_UPI0000163DD4 RNA-dependent RNA polymerase n=1 Tax=Patchouli mild mosaic virus RepID=UPI0000163DD4 Length = 699 Score = 128 bits (322), Expect = 3e-28 Identities = 73/191 (38%), Positives = 109/191 (57%), Gaps = 2/191 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L ++ I NMI +L + EV + Q N+++A RYA + Sbjct: 274 NNILCCDYSRFDGFLPKCIMNEIGNMIARLMRVD---EVSRTQIKNLMLACTSRYAMCNR 330 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNL Sbjct: 331 VLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNL 390 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 543 ISV+ + +S F+G + + +K+TDG DK IE + DFLKR F G Sbjct: 391 ISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGT 450 Query: 544 IQAPLDMTAIF 576 ++P+ +++ Sbjct: 451 WRSPMSKESLW 461 [60][TOP] >UniRef100_Q8V978 Polyprotein n=1 Tax=Patchouli mild mosaic virus RepID=Q8V978_9SECO Length = 1870 Score = 128 bits (322), Expect = 3e-28 Identities = 73/191 (38%), Positives = 109/191 (57%), Gaps = 2/191 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L ++ I NMI +L + EV + Q N+++A RYA + Sbjct: 1445 NNILCCDYSRFDGFLPKCIMNEIGNMIARLMRVD---EVSRTQIKNLMLACTSRYAMCNR 1501 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNL Sbjct: 1502 VLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNL 1561 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 543 ISV+ + +S F+G + + +K+TDG DK IE + DFLKR F G Sbjct: 1562 ISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGT 1621 Query: 544 IQAPLDMTAIF 576 ++P+ +++ Sbjct: 1622 WRSPMSKESLW 1632 [61][TOP] >UniRef100_B8Y619 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Broad bean wilt virus 2 RepID=B8Y619_9SECO Length = 594 Score = 128 bits (322), Expect = 3e-28 Identities = 73/191 (38%), Positives = 109/191 (57%), Gaps = 2/191 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L ++ I NMI +L + EV + Q N+++A RYA + Sbjct: 169 NNILCCDYSRFDGFLPKCIMNEIGNMIARLLKVD---EVSRTQIKNLMLACTSRYAMCNR 225 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNL Sbjct: 226 VLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFGDNPSVQSNFDAHVSMVVYGDDNL 285 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 543 ISV+ + +S F+G + + +K+TDG DK IE + DFLKR F G Sbjct: 286 ISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGT 345 Query: 544 IQAPLDMTAIF 576 ++P+ +++ Sbjct: 346 WRSPMSKESLW 356 [62][TOP] >UniRef100_Q9WNW0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WNW0_9SECO Length = 1870 Score = 127 bits (320), Expect = 5e-28 Identities = 73/191 (38%), Positives = 108/191 (56%), Gaps = 2/191 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L ++ I NMI +L EV + Q N+++A RYA + Sbjct: 1445 NNILCCDYSRFDGFLPKCIMNEIGNMIARLMKTD---EVSRTQIKNLMLACTSRYAMCNR 1501 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNL Sbjct: 1502 VLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNL 1561 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 543 ISV+ + +S F+G + + +K+TDG DK IE + DFLKR F G Sbjct: 1562 ISVSDAISSRFDGNFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGT 1621 Query: 544 IQAPLDMTAIF 576 ++P+ +++ Sbjct: 1622 WRSPMSKESLW 1632 [63][TOP] >UniRef100_Q9WP48 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WP48_9SECO Length = 1769 Score = 127 bits (318), Expect = 8e-28 Identities = 73/191 (38%), Positives = 108/191 (56%), Gaps = 2/191 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L ++ I +MI KL EV + Q N+++A RYA + Sbjct: 1344 NNILCCDYSRFDGFLPKCIMNEIGDMIAKLMKAD---EVSKTQIKNLMLACTSRYAMCNR 1400 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNL Sbjct: 1401 VLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPNVQSNFDAHVSMVVYGDDNL 1460 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 543 ISV+ + +S F+G + + +K+TDG DK IE + DFLKR F G Sbjct: 1461 ISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGT 1520 Query: 544 IQAPLDMTAIF 576 ++P+ +++ Sbjct: 1521 WRSPMSKESLW 1531 [64][TOP] >UniRef100_UPI0000163DDB RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 2 RepID=UPI0000163DDB Length = 697 Score = 126 bits (317), Expect = 1e-27 Identities = 75/191 (39%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L V+ I MI ++ S ES Q N+++A RYA + Sbjct: 272 NNVLCCDYSRFDGFLPKCVMNEIGEMIARVMRASDESRTQIK---NLMLACTSRYAMCNR 328 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNL 363 +++V G+PSGF LTVVVNS+ NEIL++YAY A P + F V ++VYGDDNL Sbjct: 329 ILYRVENGIPSGFPLTVVVNSILNEILVKYAYWHCFADNPTVQSNFDAHVSMVVYGDDNL 388 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 543 ISV+ + +S F+G + + +K+TDG DK IE + DFLKR F G Sbjct: 389 ISVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMNPDGT 448 Query: 544 IQAPLDMTAIF 576 + P+ +++ Sbjct: 449 WRCPMSKESLW 459 [65][TOP] >UniRef100_Q997D0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q997D0_9SECO Length = 1869 Score = 126 bits (317), Expect = 1e-27 Identities = 75/191 (39%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L V+ I MI ++ S ES Q N+++A RYA + Sbjct: 1444 NNVLCCDYSRFDGFLPKCVMNEIGEMIARVMRASDESRTQIK---NLMLACTSRYAMCNR 1500 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNL 363 +++V G+PSGF LTVVVNS+ NEIL++YAY A P + F V ++VYGDDNL Sbjct: 1501 ILYRVENGIPSGFPLTVVVNSILNEILVKYAYWHCFADNPTVQSNFDAHVSMVVYGDDNL 1560 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 543 ISV+ + +S F+G + + +K+TDG DK IE + DFLKR F G Sbjct: 1561 ISVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMNPDGT 1620 Query: 544 IQAPLDMTAIF 576 + P+ +++ Sbjct: 1621 WRCPMSKESLW 1631 [66][TOP] >UniRef100_Q4W8R6 Polyprotein n=1 Tax=Gentian mosaic virus RepID=Q4W8R6_9SECO Length = 1853 Score = 126 bits (317), Expect = 1e-27 Identities = 74/191 (38%), Positives = 109/191 (57%), Gaps = 2/191 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L ++ I ++I + E+EV+Q N+L+A GRYA + Sbjct: 1423 NNILCCDYSRFDGFLPKCIMSQIGHLIGT-FMKKDEAEVEQI--CNLLLACSGRYAICEK 1479 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+VNS+ NEIL++YA+R R F V L+VYGDDNL Sbjct: 1480 LLYRVENGIPSGFPLTVIVNSILNEILVKYAFRMCFADNPMVRESFDTHVSLVVYGDDNL 1539 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 543 ISV+ + ++ FNGE + + + +TDG DK I + + DFLKR F L G Sbjct: 1540 ISVSDAISAKFNGEFLVDFFLKLSITVTDGVDKTKKGISFRRLADCDFLKRGFKNLPDGE 1599 Query: 544 IQAPLDMTAIF 576 P+ +++ Sbjct: 1600 WIGPMSRESLW 1610 [67][TOP] >UniRef100_B4ZF31 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato black ring virus RepID=B4ZF31_9SECO Length = 73 Score = 125 bits (313), Expect = 3e-27 Identities = 61/72 (84%), Positives = 66/72 (91%) Frame = +1 Query: 220 SGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFN 399 SGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF TVCL+VYGDDNLISV+PS ASWF Sbjct: 1 SGFALTVVVNSVFNEILIRYAYKKLAPVPERNRFGSTVCLLVYGDDNLISVSPSIASWFT 60 Query: 400 GEAIRVTLAEKK 435 GEAIR+TLAEKK Sbjct: 61 GEAIRITLAEKK 72 [68][TOP] >UniRef100_Q998P7 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q998P7_9SECO Length = 1869 Score = 123 bits (309), Expect = 9e-27 Identities = 72/191 (37%), Positives = 109/191 (57%), Gaps = 2/191 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L V+ I +MI ++ + ES+ Q N+++A RYA + Sbjct: 1444 NNILCCDYSRFDGFLPKCVMNEIGDMIARVMRANDESKTQIK---NLMLACTSRYAMCNR 1500 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKP-EKCRFQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNL Sbjct: 1501 ILYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFVDNPIVQSNFDAHVSMVVYGDDNL 1560 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 543 ISV+ + +S F+G + + +K+TDG DK IE + DFLKR F G Sbjct: 1561 ISVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKLNPDGT 1620 Query: 544 IQAPLDMTAIF 576 ++P+ +++ Sbjct: 1621 WRSPMSKESLW 1631 [69][TOP] >UniRef100_Q9E933 210kDa protein n=1 Tax=Broad bean wilt virus 2 RepID=Q9E933_9SECO Length = 1870 Score = 122 bits (306), Expect = 2e-26 Identities = 72/191 (37%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N + CDYS FDG L ++ I NMI +L + EV +AQ N+++A RYA + Sbjct: 1445 NNILCCDYSRFDGFLPKCIMNEIGNMIARLMKVD---EVSKAQIKNLMLACTSRYAMCNR 1501 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNL 363 +++V G+PSGF LTV+ NS+ NEIL++YAY P + F V + YGDDNL Sbjct: 1502 VLYRVENGIPSGFPLTVIGNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMEEYGDDNL 1561 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 543 ISV+ + +S F+G + + +K+TDG DK IE + DFLKR F G Sbjct: 1562 ISVSDAISSKFDGSFLVSFIEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGT 1621 Query: 544 IQAPLDMTAIF 576 ++P+ +++ Sbjct: 1622 WRSPMSKESLW 1632 [70][TOP] >UniRef100_A5A4Z3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cowpea mosaic virus RepID=A5A4Z3_CPMV Length = 203 Score = 117 bits (294), Expect = 5e-25 Identities = 62/124 (50%), Positives = 87/124 (70%), Gaps = 5/124 (4%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ + CDYS+FDGLL+ QV++ IA+MIN+L GE +++ A+R N+LMA R A Sbjct: 83 NDVLCCDYSSFDGLLSKQVMDVIASMINEL--CGGEDQLKNARR-NLLMACCSRLAICKN 139 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL AP+ F + + L+ YGD Sbjct: 140 TVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLMGLVTYGD 199 Query: 355 DNLI 366 DNL+ Sbjct: 200 DNLV 203 [71][TOP] >UniRef100_Q3YC01 Polyprotein (Fragment) n=1 Tax=Stocky prune virus RepID=Q3YC01_9SECO Length = 795 Score = 113 bits (282), Expect = 1e-23 Identities = 71/201 (35%), Positives = 114/201 (56%), Gaps = 11/201 (5%) Frame = +1 Query: 4 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVG--RYA 177 GTN N D+ FDG+ V+ + INKLY G+++ A + L+ L+ RYA Sbjct: 372 GTNW-FNGDFERFDGITPRDVMVQLVIRINKLYK-RGDADRPLANKVRSLLMLMASDRYA 429 Query: 178 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP------EKCRFQQTVCL 339 G+ ++KV+CG+PSGF+LTV+VNS+ NE +R+A++++ + + V Sbjct: 430 IAGRNLYKVSCGIPSGFSLTVIVNSLVNEFFLRFAWKRIVRASLGEAFVHRSIMDREVHF 489 Query: 340 IVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDG---SDKDAPTIESKPFWELDFL 510 VYGDDNL+SV+ +S +N +I L E+ V + +G ++D P P DFL Sbjct: 490 AVYGDDNLVSVSDKYSSLYNLVSISSFLRERGVVLKNGQCKDEEDFPPFSPSPS-TCDFL 548 Query: 511 KRKFLKLDTGVIQAPLDMTAI 573 KR+F+ +G + APLD +++ Sbjct: 549 KRRFVLGSSGRVLAPLDKSSL 569 [72][TOP] >UniRef100_Q20LA1 Polyprotein 1 (Fragment) n=1 Tax=Raspberry ringspot virus RepID=Q20LA1_9SECO Length = 533 Score = 112 bits (280), Expect = 2e-23 Identities = 54/119 (45%), Positives = 79/119 (66%) Frame = +1 Query: 25 CDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKV 204 CDYS FDGL+ Q++ I + +++ SG+ + Q R N++M + R + G +V++V Sbjct: 416 CDYSKFDGLMTPQIVHAITGIYERMF--SGKDGMSQF-RQNLMMGICNRISICGSQVYRV 472 Query: 205 NCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPS 381 G+PSGFALTV NS+FNEIL+R AYR L P+ E+ F V LIVYGDDN++ + P+ Sbjct: 473 EAGMPSGFALTVDFNSIFNEILVRCAYRSLVPEIERPFFSNNVALIVYGDDNVMGIHPN 531 [73][TOP] >UniRef100_B9UKJ7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cocoa necrosis virus RepID=B9UKJ7_9SECO Length = 76 Score = 111 bits (277), Expect = 5e-23 Identities = 53/68 (77%), Positives = 61/68 (89%) Frame = +1 Query: 259 NEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKV 438 +EILIRYAY+KLAPKP++ F +VCL+VYGDDNLISV+PS ASWF GEAIRV LAEKK+ Sbjct: 9 HEILIRYAYKKLAPKPQRNLFGVSVCLLVYGDDNLISVSPSIASWFTGEAIRVCLAEKKI 68 Query: 439 KITDGSDK 462 KITDGSDK Sbjct: 69 KITDGSDK 76 [74][TOP] >UniRef100_Q6A2S5 Polyprotein (Fragment) n=1 Tax=Potato black ringspot virus RepID=Q6A2S5_9SECO Length = 252 Score = 110 bits (274), Expect = 1e-22 Identities = 59/119 (49%), Positives = 77/119 (64%), Gaps = 9/119 (7%) Frame = +1 Query: 16 AINCDYSAFDGLLNAQVIECIANMINKLYALS-----GESEVQ----QAQRYNMLMALVG 168 A NCDYS FDGL++ QV++ I M+NK YA + G EV Q R+N+LM++ G Sbjct: 134 AYNCDYSKFDGLMSCQVLDAIGKMVNKCYANTNPNKKGRGEVPGSPPQLARHNLLMSIFG 193 Query: 169 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 345 R +VF+V G+PSG ALTV++NSVFNEILIRY Y+ + P PE RF+ V L V Sbjct: 194 RKCLARSQVFEVRGGIPSGCALTVLLNSVFNEILIRYVYKTVVPSPEFNRFETFVTLAV 252 [75][TOP] >UniRef100_Q6A1M5 Polyprotein (Fragment) n=1 Tax=Tobacco ringspot virus RepID=Q6A1M5_TRSV Length = 254 Score = 108 bits (270), Expect = 3e-22 Identities = 57/121 (47%), Positives = 79/121 (65%), Gaps = 11/121 (9%) Frame = +1 Query: 16 AINCDYSAFDGLLNAQVIECIANMINKLYALS-------GESEVQ----QAQRYNMLMAL 162 A NCDYS FDGL++ QV++ I M+NK Y+ + G+ E+ Q R+N+LM++ Sbjct: 134 AYNCDYSKFDGLMSCQVLDAIGKMVNKCYSNANPNLKKKGKGELPGSPPQLARHNLLMSI 193 Query: 163 VGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLI 342 GR +VF+V G+PSG ALTV++NSVFNEILIRY Y+ + P PE RF+ V L+ Sbjct: 194 FGRKCLARSQVFEVRGGIPSGCALTVLLNSVFNEILIRYVYKTVIPSPEFNRFETFVTLV 253 Query: 343 V 345 V Sbjct: 254 V 254 [76][TOP] >UniRef100_Q6A1M4 Polyprotein (Fragment) n=1 Tax=Squash mosaic virus RepID=Q6A1M4_9SECO Length = 243 Score = 106 bits (265), Expect = 1e-21 Identities = 55/111 (49%), Positives = 72/111 (64%), Gaps = 5/111 (4%) Frame = +1 Query: 25 CDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKV 204 CDY +FDGLL+ QV+ IA MIN+L G S+ Q R N+LMA RYA +V++V Sbjct: 135 CDYKSFDGLLSKQVMTVIATMINRL---CGGSQESQTMRMNLLMACCSRYAISKNEVWRV 191 Query: 205 NCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLI 342 CG+PSGF LTV+ NS+FNEIL+RY YRK+ P+P F + V L+ Sbjct: 192 ECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLV 242 [77][TOP] >UniRef100_A5A4Z4 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Bean pod mottle virus RepID=A5A4Z4_9SECO Length = 197 Score = 106 bits (265), Expect = 1e-21 Identities = 57/124 (45%), Positives = 79/124 (63%), Gaps = 5/124 (4%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ + CDY++FDGL+ QV+ +A MIN +L G E +R ++L+A R A + Sbjct: 77 NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKLMRERTHLLLACCSRMAICKK 133 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 354 V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ V L VYGD Sbjct: 134 DVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFVSLCVYGD 193 Query: 355 DNLI 366 DNL+ Sbjct: 194 DNLV 197 [78][TOP] >UniRef100_Q1XEP0 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus RepID=Q1XEP0_9SECO Length = 239 Score = 104 bits (260), Expect = 4e-21 Identities = 49/113 (43%), Positives = 75/113 (66%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVG 186 + A+NCDYS+FDGL+ Q++ CI +MIN +Y G+S+ + R N+LMA+ R + G Sbjct: 130 SENALNCDYSSFDGLMTGQMLSCIGDMINTMY---GDSQKSKNGRKNLLMAICNRKSLCG 186 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 345 ++V G+PSG ALTV++NS+FNEIL+R Y+ + P + F + V L+V Sbjct: 187 ADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239 [79][TOP] >UniRef100_Q1XEN9 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus RepID=Q1XEN9_9SECO Length = 239 Score = 104 bits (260), Expect = 4e-21 Identities = 49/113 (43%), Positives = 75/113 (66%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVG 186 + A+NCDYS+FDGL+ Q++ CI +MIN +Y G+S+ + R N+LMA+ R + G Sbjct: 130 SENALNCDYSSFDGLMTGQMLSCIGDMINTMY---GDSQKSKNGRKNLLMAICNRKSLCG 186 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 345 ++V G+PSG ALTV++NS+FNEIL+R Y+ + P + F + V L+V Sbjct: 187 ADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239 [80][TOP] >UniRef100_Q1XEN8 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus RepID=Q1XEN8_9SECO Length = 239 Score = 104 bits (260), Expect = 4e-21 Identities = 49/113 (43%), Positives = 75/113 (66%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVG 186 + A+NCDYS+FDGL+ Q++ CI +MIN +Y G+S+ + R N+LMA+ R + G Sbjct: 130 SENALNCDYSSFDGLMTGQMLSCIGDMINTMY---GDSQKSKNGRKNLLMAICNRKSLCG 186 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 345 ++V G+PSG ALTV++NS+FNEIL+R Y+ + P + F + V L+V Sbjct: 187 ADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239 [81][TOP] >UniRef100_Q5DIW8 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q5DIW8_CRLV Length = 2235 Score = 98.2 bits (243), Expect = 4e-19 Identities = 71/201 (35%), Positives = 99/201 (49%), Gaps = 15/201 (7%) Frame = +1 Query: 4 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQ-------RYNMLMAL 162 GTN N DYS FDG+ V++ I INK Y + + ++LM + Sbjct: 1798 GTNW-FNGDYSRFDGITPRNVLQGIVKRINKFYNNKNSLAITDSNLSINSDLARSLLMDM 1856 Query: 163 VG-RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------KCRF 321 RY ++ V G+PSGF LTV+VNS+ N I ++Y KL + E F Sbjct: 1857 ASTRYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSF 1916 Query: 322 QQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KPFWE 498 +Q V YGDDNL+SV FN I LAE V + +G+DK+ + P + Sbjct: 1917 RQMVAYATYGDDNLVSVNDVITERFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEK 1976 Query: 499 LDFLKRKFLKLDTGVIQAPLD 561 +DFLKRKF+ G + APL+ Sbjct: 1977 VDFLKRKFVHYQ-GHVVAPLN 1996 [82][TOP] >UniRef100_UPI000043F357 RNA-dependent RNA polymerase n=1 Tax=Cherry rasp leaf virus RepID=UPI000043F357 Length = 707 Score = 97.4 bits (241), Expect = 7e-19 Identities = 73/204 (35%), Positives = 101/204 (49%), Gaps = 18/204 (8%) Frame = +1 Query: 4 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYA-----------LSGESEVQQAQRYNM 150 GTN N DYS FDG+ V++ I INK Y LS S++ ++ +M Sbjct: 270 GTNW-FNGDYSRFDGITPRNVLQGIVKRINKFYNNKNSLAITDSNLSINSDLARSLLTDM 328 Query: 151 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------K 312 RY ++ V G+PSGF LTV+VNS+ N I ++Y KL + E Sbjct: 329 AST---RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPL 385 Query: 313 CRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KP 489 F+Q V YGDDNL+SV FN I LAE V + +G+DK+ + P Sbjct: 386 HSFRQMVAYATYGDDNLVSVNDVITEKFNLVKIADLLAEHGVTLKNGADKNEEILSPFYP 445 Query: 490 FWELDFLKRKFLKLDTGVIQAPLD 561 ++DFLKRKF+ G + APL+ Sbjct: 446 LEKVDFLKRKFVHYQ-GHVVAPLN 468 [83][TOP] >UniRef100_Q6EWG9 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q6EWG9_CRLV Length = 2250 Score = 97.4 bits (241), Expect = 7e-19 Identities = 73/204 (35%), Positives = 101/204 (49%), Gaps = 18/204 (8%) Frame = +1 Query: 4 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYA-----------LSGESEVQQAQRYNM 150 GTN N DYS FDG+ V++ I INK Y LS S++ ++ +M Sbjct: 1813 GTNW-FNGDYSRFDGITPRNVLQGIVKRINKFYNNKNSLAITDSNLSINSDLARSLLTDM 1871 Query: 151 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------K 312 RY ++ V G+PSGF LTV+VNS+ N I ++Y KL + E Sbjct: 1872 AST---RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPL 1928 Query: 313 CRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KP 489 F+Q V YGDDNL+SV FN I LAE V + +G+DK+ + P Sbjct: 1929 HSFRQMVAYATYGDDNLVSVNDVITEKFNLVKIADLLAEHGVTLKNGADKNEEILSPFYP 1988 Query: 490 FWELDFLKRKFLKLDTGVIQAPLD 561 ++DFLKRKF+ G + APL+ Sbjct: 1989 LEKVDFLKRKFVHYQ-GHVVAPLN 2011 [84][TOP] >UniRef100_Q6A1Z2 Polyprotein (Fragment) n=1 Tax=Arabis mosaic virus RepID=Q6A1Z2_ARMV Length = 236 Score = 96.3 bits (238), Expect = 2e-18 Identities = 46/107 (42%), Positives = 68/107 (63%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 NCDY FDGL+ Q++ A MIN Y + V QR N+L+A+ GR + G +V++ Sbjct: 133 NCDYKGFDGLITEQILAVAATMINTGY----RNPVGNQQRSNLLLAICGRLSICGNQVYE 188 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLI 342 G+PSG ALTVV+NS+FNE+L+RY ++K+ P + F + V L+ Sbjct: 189 TEAGIPSGCALTVVINSIFNELLMRYCFKKIVPPVYRECFDRCVVLV 235 [85][TOP] >UniRef100_Q6A2S6 Polyprotein (Fragment) n=1 Tax=Cherry leaf roll virus RepID=Q6A2S6_9SECO Length = 240 Score = 95.5 bits (236), Expect = 3e-18 Identities = 48/111 (43%), Positives = 73/111 (65%) Frame = +1 Query: 13 EAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQK 192 +A+N DY +FDG LN Q+ + IA ++ +++ S+ RYN++MA+ RY+ G + Sbjct: 134 KALNGDYKSFDGKLNFQMYDAIARLLGRVHRDESTSQA----RYNLIMAMYARYSLCGSQ 189 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 345 V++V GLPSG A+TV+++S+FNEILIRYAYR + RF V L+V Sbjct: 190 VYEVRAGLPSGCAITVIMDSIFNEILIRYAYRVSVGPILRNRFNHFVKLVV 240 [86][TOP] >UniRef100_Q9YZ97 Polyprotein (Fragment) n=1 Tax=Navel orange infectious mottling virus RepID=Q9YZ97_SDV Length = 872 Score = 95.1 bits (235), Expect = 3e-18 Identities = 66/190 (34%), Positives = 102/190 (53%), Gaps = 8/190 (4%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 DYS FD ++ I + IN+L +G+SE+ Q R N++ ++ RY V++++ Sbjct: 475 DYSGFDTSTPRILVYAIVDKINEL---AGDSEMNQRTRRNIIRFVLNRYLISDGYVYEIH 531 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGDDNLIS 369 G PSGFA TV++NS+ NE +++++ L A + F + + +YGDDN +S Sbjct: 532 GGTPSGFAPTVMINSIVNEFYLKWSWMGLMKEAGYAKEASLYAFHEATEISLYGDDNFVS 591 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTG--V 543 VA AS +N + I L VK+ DG+ K T P E+DFLKR+F+ D G Sbjct: 592 VATPVASLYNLKTISEFLRRIGVKLGDGA-KTGITKPFIPLEEVDFLKRQFV-ADAGSTA 649 Query: 544 IQAPLDMTAI 573 I PL +I Sbjct: 650 ILCPLKKISI 659 [87][TOP] >UniRef100_UPI00004FF342 polymerase n=1 Tax=Strawberry latent ringspot virus RepID=UPI00004FF342 Length = 675 Score = 94.4 bits (233), Expect = 6e-18 Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 1/174 (0%) Frame = +1 Query: 4 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV 183 GTN N DYS FDG+ ++ I+N I KLY + + +R ++++A R Sbjct: 273 GTNW-FNGDYSRFDGVTPRCLLIEISNRITKLYG-----DEHRERRLHLMLAATTRLGVA 326 Query: 184 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 363 G +++V+ G+P GFALTV+VNS+ N L+R+++ + F V L V GDDNL Sbjct: 327 GIGLYRVSGGIPPGFALTVIVNSLVNHFLVRWSWEHMMAS-SSLFFTDCVELAVVGDDNL 385 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-ESKPFWELDFLKRKF 522 +SV A FN + + LA + DGSDK+ + E P + DFLKR F Sbjct: 386 VSVKQVAAEDFNLKKLSAFLAGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCF 439 [88][TOP] >UniRef100_Q5G2U4 250 kDa polyprotein n=1 Tax=Strawberry latent ringspot virus RepID=Q5G2U4_9SECO Length = 2227 Score = 94.4 bits (233), Expect = 6e-18 Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 1/174 (0%) Frame = +1 Query: 4 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV 183 GTN N DYS FDG+ ++ I+N I KLY + + +R ++++A R Sbjct: 1825 GTNW-FNGDYSRFDGVTPRCLLIEISNRITKLYG-----DEHRERRLHLMLAATTRLGVA 1878 Query: 184 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 363 G +++V+ G+P GFALTV+VNS+ N L+R+++ + F V L V GDDNL Sbjct: 1879 GIGLYRVSGGIPPGFALTVIVNSLVNHFLVRWSWEHMMAS-SSLFFTDCVELAVVGDDNL 1937 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-ESKPFWELDFLKRKF 522 +SV A FN + + LA + DGSDK+ + E P + DFLKR F Sbjct: 1938 VSVKQVAAEDFNLKKLSAFLAGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCF 1991 [89][TOP] >UniRef100_UPI0000164A53 RNA-dependent RNA polymerase n=1 Tax=Apple latent spherical virus RepID=UPI0000164A53 Length = 709 Score = 94.0 bits (232), Expect = 8e-18 Identities = 72/205 (35%), Positives = 101/205 (49%), Gaps = 15/205 (7%) Frame = +1 Query: 4 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQ-------RYNMLMAL 162 GTN N DYS FDG+ V++ I I++ YA + ++LM + Sbjct: 270 GTNW-FNGDYSRFDGITPRNVLQGIVKRISRRYANKSSFAITDPTLSINGDLARSLLMDM 328 Query: 163 VG-RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-APKPEKC-----RF 321 RY ++ V G+PSGF LTV+VNS+ N + +AY KL + + K F Sbjct: 329 CSTRYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNSFFVHFAYMKLHSSEVHKALYPLYSF 388 Query: 322 QQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KPFWE 498 + V VYGDDNLISV + FN I L E V + +G+DK+ + P + Sbjct: 389 RTLVSYAVYGDDNLISVHDTIKDTFNLVTISNLLLEHGVTLKNGADKNEEILSPFYPIEK 448 Query: 499 LDFLKRKFLKLDTGVIQAPLDMTAI 573 +DFLKR+F L G I APL+ I Sbjct: 449 VDFLKRRFTTLQ-GHIVAPLNTVNI 472 [90][TOP] >UniRef100_Q9JGP2 235K polyprotein n=1 Tax=Apple latent spherical virus RepID=Q9JGP2_9SECO Length = 2079 Score = 94.0 bits (232), Expect = 8e-18 Identities = 72/205 (35%), Positives = 101/205 (49%), Gaps = 15/205 (7%) Frame = +1 Query: 4 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQ-------RYNMLMAL 162 GTN N DYS FDG+ V++ I I++ YA + ++LM + Sbjct: 1640 GTNW-FNGDYSRFDGITPRNVLQGIVKRISRRYANKSSFAITDPTLSINGDLARSLLMDM 1698 Query: 163 VG-RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-APKPEKC-----RF 321 RY ++ V G+PSGF LTV+VNS+ N + +AY KL + + K F Sbjct: 1699 CSTRYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNSFFVHFAYMKLHSSEVHKALYPLYSF 1758 Query: 322 QQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KPFWE 498 + V VYGDDNLISV + FN I L E V + +G+DK+ + P + Sbjct: 1759 RTLVSYAVYGDDNLISVHDTIKDTFNLVTISNLLLEHGVTLKNGADKNEEILSPFYPIEK 1818 Query: 499 LDFLKRKFLKLDTGVIQAPLDMTAI 573 +DFLKR+F L G I APL+ I Sbjct: 1819 VDFLKRRFTTLQ-GHIVAPLNTVNI 1842 [91][TOP] >UniRef100_B6CWG9 Polyprotein n=1 Tax=Tomato torrado virus RepID=B6CWG9_9SECO Length = 2158 Score = 93.6 bits (231), Expect = 1e-17 Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVG 186 ++ + DYS+FDG + ++++ Y S A R+ +LM Y Sbjct: 1375 SDTGFSADYSSFDGRAPIFAFQWFCDLVDDYYGSPPGSPDSNA-RHVLLMMASCHYTICE 1433 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLI 342 KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K + + Sbjct: 1434 NKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVA 1493 Query: 343 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESK--PFWELDFLKR 516 VYGDDNL++V P W+ AI L V I +G DK+ SK EL FL R Sbjct: 1494 VYGDDNLVAV-PMELQWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSELTFLSR 1552 Query: 517 KFLKLDTGVIQAPLDMTAI 573 F + G +QAPL +I Sbjct: 1553 GFKRHRLGYVQAPLKWVSI 1571 [92][TOP] >UniRef100_A1XIP9 Polyprotein n=1 Tax=Tomato torrado virus RepID=A1XIP9_9SECO Length = 2158 Score = 93.2 bits (230), Expect = 1e-17 Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 10/199 (5%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVG 186 ++ + DYS+FDG + ++++ Y S A R+ +LM Y Sbjct: 1375 SDTGFSADYSSFDGRAPIFAFQWFCDLVDDYYGSPPGSPDSNA-RHVLLMMASCHYTICE 1433 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLI 342 KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K + + Sbjct: 1434 NKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVA 1493 Query: 343 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESK--PFWELDFLKR 516 VYGDDNL++V P W+ AI L V I +G DK+ SK EL FL R Sbjct: 1494 VYGDDNLVAV-PMELHWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSELTFLSR 1552 Query: 517 KFLKLDTGVIQAPLDMTAI 573 F + G +QAPL +I Sbjct: 1553 GFKRHRLGYVQAPLKWVSI 1571 [93][TOP] >UniRef100_UPI0000163D77 RNA-dependent RNA polymerase n=1 Tax=Rice tungro spherical virus RepID=UPI0000163D77 Length = 621 Score = 92.4 bits (228), Expect = 2e-17 Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 11/193 (5%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 DYS FDG+ + + I N++N Y + EV R++++ ++V R G + + + Sbjct: 309 DYSKFDGIGSPAIYHSIVNVVNAWY---NDGEVNARARHSLISSIVHRDGICGDLILRYS 365 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV-YGDDNLIS 369 G+PSGFA+TV+ NS N + A+ L C+ T C IV YGDDN++S Sbjct: 366 QGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVAYGDDNVVS 425 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKRKFLKLDTG 540 V +N + + L+ V TDG DK+ P SKP+ ++ FLKR F ++++ Sbjct: 426 VHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKRGFERVESS 483 Query: 541 --VIQAPLDMTAI 573 + +APLD T+I Sbjct: 484 GFLWKAPLDKTSI 496 [94][TOP] >UniRef100_C7EXM2 Polyprotein n=1 Tax=Tomato chocolate spot virus RepID=C7EXM2_9VIRU Length = 2155 Score = 92.4 bits (228), Expect = 2e-17 Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 10/199 (5%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVG 186 +N + DYS+FDG + + ++++ Y + S A R+ +LM Y Sbjct: 1378 SNIGFSADYSSFDGRAPVFIFQWFCDLVDDYYGSATGSPESNA-RHALLMMASCHYTLCE 1436 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLI 342 KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K + + Sbjct: 1437 DKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPHDFNQLFVA 1496 Query: 343 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIESKPFWELDFLKR 516 VYGDDNL++V P W++ I L V I +G DK D ++ + EL FL R Sbjct: 1497 VYGDDNLVAV-PLHLQWYSLPNIAQELDMVNVVIKNGLDKSMDVNEVQFQDLSELTFLSR 1555 Query: 517 KFLKLDTGVIQAPLDMTAI 573 F + G APL +I Sbjct: 1556 GFKRHALGYHMAPLKWVSI 1574 [95][TOP] >UniRef100_Q83034 Probable RNA-directed RNA polymerase n=2 Tax=Rice tungro spherical virus RepID=POLG_RTSVA Length = 3473 Score = 92.4 bits (228), Expect = 2e-17 Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 11/193 (5%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 DYS FDG+ + + I N++N Y + EV R++++ ++V R G + + + Sbjct: 3161 DYSKFDGIGSPAIYHSIVNVVNAWY---NDGEVNARARHSLISSIVHRDGICGDLILRYS 3217 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV-YGDDNLIS 369 G+PSGFA+TV+ NS N + A+ L C+ T C IV YGDDN++S Sbjct: 3218 QGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVAYGDDNVVS 3277 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKRKFLKLDTG 540 V +N + + L+ V TDG DK+ P SKP+ ++ FLKR F ++++ Sbjct: 3278 VHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKRGFERVESS 3335 Query: 541 --VIQAPLDMTAI 573 + +APLD T+I Sbjct: 3336 GFLWKAPLDKTSI 3348 [96][TOP] >UniRef100_Q98645 ORF1 protein (Fragment) n=1 Tax=Rice tungro spherical virus RepID=Q98645_9SECO Length = 1619 Score = 92.0 bits (227), Expect = 3e-17 Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 11/193 (5%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 DYS FDG+ + + I N++N Y + EV R++++ ++V R G + + + Sbjct: 1306 DYSKFDGIGSPAIYHSIVNVVNAWY---DDGEVNARARHSLISSIVHRDGICGDLILRYS 1362 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV-YGDDNLIS 369 G+PSGFA+TV+ NS N + A+ L C+ T C IV YGDDN++S Sbjct: 1363 QGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVAYGDDNVVS 1422 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKRKFLKLDTG 540 V +N + + L+ V TDG DK+ P SKP+ ++ FLKR F ++++ Sbjct: 1423 VHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKRGFERVESS 1480 Query: 541 --VIQAPLDMTAI 573 + +APLD T+I Sbjct: 1481 GFLWKAPLDKTSI 1493 [97][TOP] >UniRef100_Q91PP5 Probable RNA-directed RNA polymerase n=1 Tax=Rice tungro spherical virus (isolate Vt6) RepID=POLG_RTSVT Length = 3471 Score = 92.0 bits (227), Expect = 3e-17 Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 11/193 (5%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 DYS FDG+ + + I N++N Y + EV R++++ ++V R G + + + Sbjct: 3158 DYSKFDGIGSPAIYHSIVNVVNAWY---DDGEVNARARHSLISSIVHRDGICGDLILRYS 3214 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV-YGDDNLIS 369 G+PSGFA+TV+ NS N + A+ L C+ T C IV YGDDN++S Sbjct: 3215 QGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVAYGDDNVVS 3274 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKRKFLKLDTG 540 V +N + + L+ V TDG DK+ P SKP+ ++ FLKR F ++++ Sbjct: 3275 VHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKRGFERVESS 3332 Query: 541 --VIQAPLDMTAI 573 + +APLD T+I Sbjct: 3333 GFLWKAPLDKTSI 3345 [98][TOP] >UniRef100_Q1MNG5 Polyprotein n=1 Tax=Rice tungro spherical virus RepID=Q1MNG5_9SECO Length = 3471 Score = 90.1 bits (222), Expect = 1e-16 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 11/193 (5%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 DYS FDG+ + + I N+++ Y + EV R++++ ++V R G + + + Sbjct: 3158 DYSKFDGIGSPAIYHSIVNVVDAWY---DDGEVNARARHSLISSIVHRDGICGDLILRYS 3214 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV-YGDDNLIS 369 G+PSGFA+TV+ NS N + A+ L C+ T C IV YGDDN++S Sbjct: 3215 QGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVAYGDDNVVS 3274 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKRKFLKLDTG 540 V +N + + L+ V TDG DK+ P SKP+ ++ FLKR F ++++ Sbjct: 3275 VHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKRGFERVESS 3332 Query: 541 --VIQAPLDMTAI 573 + +APLD T+I Sbjct: 3333 GFLWKAPLDKTSI 3345 [99][TOP] >UniRef100_Q1MNG4 Polyprotein n=1 Tax=Rice tungro spherical virus RepID=Q1MNG4_9SECO Length = 3471 Score = 90.1 bits (222), Expect = 1e-16 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 11/193 (5%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 DYS FDG+ + + I N+++ Y + EV R++++ ++V R G + + + Sbjct: 3158 DYSKFDGIGSPAIYHSIVNVVDAWY---DDGEVNARARHSLISSIVHRDGICGDLILRYS 3214 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV-YGDDNLIS 369 G+PSGFA+TV+ NS N + A+ L C+ T C IV YGDDN++S Sbjct: 3215 QGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVAYGDDNVVS 3274 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKRKFLKLDTG 540 V +N + + L+ V TDG DK+ P SKP+ ++ FLKR F ++++ Sbjct: 3275 VHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKRGFERVESS 3332 Query: 541 --VIQAPLDMTAI 573 + +APLD T+I Sbjct: 3333 GFLWKAPLDKTSI 3345 [100][TOP] >UniRef100_UPI0000163DC1 RNA-dependent RNA polymerase n=1 Tax=Maize chlorotic dwarf virus RepID=UPI0000163DC1 Length = 612 Score = 89.7 bits (221), Expect = 1e-16 Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 12/194 (6%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 DYS FDG+ + Q+ I ++N Y + E R+ ++ +++ R V + +F+ Sbjct: 298 DYSKFDGIGDPQIYHSITQVVNNWY---DDGEENARTRHALISSIIHREGIVKEYLFQYC 354 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAYRK------LAPKPEKCRFQQTVCLIVYGDDNLIS 369 G+PSGFA+TV+ NS N + A+ L+P+ F ++VYGDDN++S Sbjct: 355 QGMPSGFAMTVIFNSFVNYYYLAMAWMNLISHSPLSPQSTVRDFDNYCKVVVYGDDNIVS 414 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWEL---DFLKRKFLKLD-- 534 V + ++N + L++ V TD D P +S PF E+ FLKR+++ L Sbjct: 415 VDLNFLEYYNLRTVAAYLSQFGVTYTD--DAKNPIEKSVPFVEITSVSFLKRRWVPLGGR 472 Query: 535 -TGVIQAPLDMTAI 573 + + +APLD T+I Sbjct: 473 LSTIYKAPLDKTSI 486 [101][TOP] >UniRef100_Q769F2 RNA dependent RNA polymerase (Fragment) n=1 Tax=Satsuma dwarf virus RepID=Q769F2_SDV Length = 374 Score = 89.7 bits (221), Expect = 1e-16 Identities = 53/146 (36%), Positives = 83/146 (56%), Gaps = 6/146 (4%) Frame = +1 Query: 106 LSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 285 L+ +SEV Q R N++ ++ RY +++++ G PSGFA TV++NSV NE +++++ Sbjct: 1 LADDSEVYQRTRRNIIRFILNRYLISDGVLYEIHGGTPSGFAPTVMLNSVVNEFYLKWSW 60 Query: 286 RKL------APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKIT 447 + A + C F + + VYGDDN +SVA AS +N + I L+ VK+ Sbjct: 61 MGIMREAGYAKEASLCAFHEATEISVYGDDNFVSVATPVASLYNLKTISEFLSRVGVKLG 120 Query: 448 DGSDKDAPTIESKPFWELDFLKRKFL 525 DG+ K P E+DFLKRKF+ Sbjct: 121 DGA-KSGTIKPFIPLEEVDFLKRKFV 145 [102][TOP] >UniRef100_O11979 Polyprotein n=2 Tax=Maize chlorotic dwarf virus RepID=O11979_9SECO Length = 3443 Score = 89.7 bits (221), Expect = 1e-16 Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 12/194 (6%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 DYS FDG+ + Q+ I ++N Y + E R+ ++ +++ R V + +F+ Sbjct: 3129 DYSKFDGIGDPQIYHSITQVVNNWY---DDGEENARTRHALISSIIHREGIVKEYLFQYC 3185 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAYRK------LAPKPEKCRFQQTVCLIVYGDDNLIS 369 G+PSGFA+TV+ NS N + A+ L+P+ F ++VYGDDN++S Sbjct: 3186 QGMPSGFAMTVIFNSFVNYYYLAMAWMNLISHSPLSPQSTVRDFDNYCKVVVYGDDNIVS 3245 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWEL---DFLKRKFLKLD-- 534 V + ++N + L++ V TD D P +S PF E+ FLKR+++ L Sbjct: 3246 VDLNFLEYYNLRTVAAYLSQFGVTYTD--DAKNPIEKSVPFVEITSVSFLKRRWVPLGGR 3303 Query: 535 -TGVIQAPLDMTAI 573 + + +APLD T+I Sbjct: 3304 LSTIYKAPLDKTSI 3317 [103][TOP] >UniRef100_A9UC61 Polyprotein n=1 Tax=Tomato marchitez virus RepID=A9UC61_9SECO Length = 2151 Score = 89.4 bits (220), Expect = 2e-16 Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 11/195 (5%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 + DYS+FDG + +++++ Y S A R+ +LM Y KVF+ Sbjct: 1381 SADYSSFDGRAPVFAFQWFCDLVDEYYGSKPGSPDSNA-RHALLMMASCHYTLCEDKVFR 1439 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQQTVCLIVYGD 354 + G+PSGFALTV+ NS+ NE +RYA+ L +P + F Q + + VYGD Sbjct: 1440 LVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFNQ-LFIAVYGD 1498 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIESKPFWELDFLKRKFLK 528 DNL++V P W++ I L V I +G DK D ++ + EL FL R F + Sbjct: 1499 DNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSELTFLSRGFKR 1557 Query: 529 LDTGVIQAPLDMTAI 573 G APL +I Sbjct: 1558 HALGYHMAPLKWVSI 1572 [104][TOP] >UniRef100_A0N0G3 Polyprotein (Fragment) n=1 Tax=Tomato apex necrosis virus RepID=A0N0G3_9VIRU Length = 1943 Score = 89.4 bits (220), Expect = 2e-16 Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 11/195 (5%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 + DYS+FDG + +++++ Y S A R+ +LM Y KVF+ Sbjct: 1173 SADYSSFDGRAPVFAFQWFCDLVDEYYGSKPGSPDSNA-RHALLMMASCHYTLCEDKVFR 1231 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQQTVCLIVYGD 354 + G+PSGFALTV+ NS+ NE +RYA+ L +P + F Q + + VYGD Sbjct: 1232 LVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFNQ-LFIAVYGD 1290 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIESKPFWELDFLKRKFLK 528 DNL++V P W++ I L V I +G DK D ++ + EL FL R F + Sbjct: 1291 DNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSELTFLSRGFKR 1349 Query: 529 LDTGVIQAPLDMTAI 573 G APL +I Sbjct: 1350 HALGYHMAPLKWVSI 1364 [105][TOP] >UniRef100_UPI0000164A59 RNA-dependent RNA polymerase n=1 Tax=Satsuma dwarf virus RepID=UPI0000164A59 Length = 682 Score = 87.8 bits (216), Expect = 5e-16 Identities = 67/193 (34%), Positives = 101/193 (52%), Gaps = 11/193 (5%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 DYS FD ++ I + IN+L + + EV Q R N++ ++ RY +++++ Sbjct: 286 DYSGFDTSTPRVLVYAIIDKINEL---ADDGEVNQRTRRNIIRFVLNRYLISDGVLYEIH 342 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGDDNLIS 369 G PSGFA TV++NSV NE +++++ L A + F + + +YGDDN +S Sbjct: 343 GGTPSGFAPTVMINSVVNEFYLKWSWIGLLKEAGYANQATLYAFHEATEISLYGDDNFVS 402 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKRKFLKLDTG 540 VA AS +N I L VK+ DG A T KPF E+DFLKR+F+ D+G Sbjct: 403 VATPVASVYNLTTISNFLGRIGVKLGDG----AKTGTIKPFIPLEEVDFLKRQFV-ADSG 457 Query: 541 --VIQAPLDMTAI 573 I PL +I Sbjct: 458 STAILCPLKKISI 470 [106][TOP] >UniRef100_Q9WAL8 Polyprotein n=3 Tax=Satsuma dwarf virus RepID=Q9WAL8_SDV Length = 2081 Score = 87.8 bits (216), Expect = 5e-16 Identities = 67/193 (34%), Positives = 101/193 (52%), Gaps = 11/193 (5%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 DYS FD ++ I + IN+L + + EV Q R N++ ++ RY +++++ Sbjct: 1685 DYSGFDTSTPRVLVYAIIDKINEL---ADDGEVNQRTRRNIIRFVLNRYLISDGVLYEIH 1741 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGDDNLIS 369 G PSGFA TV++NSV NE +++++ L A + F + + +YGDDN +S Sbjct: 1742 GGTPSGFAPTVMINSVVNEFYLKWSWIGLLKEAGYANQATLYAFHEATEISLYGDDNFVS 1801 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKRKFLKLDTG 540 VA AS +N I L VK+ DG A T KPF E+DFLKR+F+ D+G Sbjct: 1802 VATPVASVYNLTTISNFLGRIGVKLGDG----AKTGTIKPFIPLEEVDFLKRQFV-ADSG 1856 Query: 541 --VIQAPLDMTAI 573 I PL +I Sbjct: 1857 STAILCPLKKISI 1869 [107][TOP] >UniRef100_UPI0000164A61 RNA dependent RNA polymerase n=1 Tax=Strawberry mottle virus RepID=UPI0000164A61 Length = 694 Score = 87.0 bits (214), Expect = 9e-16 Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 5/189 (2%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N DY+ FD ++ IA+M++ L +G+ R N++ V R V + +++ Sbjct: 281 NGDYTGFDTATPRVLMMKIADMVSNL---AGDGRENAIVRRNLMKMAVERRILVLRDLYQ 337 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLA----PKPEKCRFQQTVCLI-VYGDDNLI 366 V G PSGFALTV++NSV N+ + +A+RK+ P R ++ C VYGDDN++ Sbjct: 338 VKGGTPSGFALTVIINSVVNQFYLMWAWRKIMSRIDPGLVPYRVMRSHCTFSVYGDDNVV 397 Query: 367 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 546 S + +N I L V ++DG K ++ F ELDFLKR+++ Sbjct: 398 SFSLQVKDMYNLVTIAAELKTIGVNLSDGK-KTGNLVKWMEFSELDFLKRRWVLYSGQGF 456 Query: 547 QAPLDMTAI 573 PL +AI Sbjct: 457 LCPLHKSAI 465 [108][TOP] >UniRef100_Q8UYV9 Polyprotein n=1 Tax=Strawberry mottle virus RepID=Q8UYV9_9SECO Length = 1915 Score = 87.0 bits (214), Expect = 9e-16 Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 5/189 (2%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N DY+ FD ++ IA+M++ L +G+ R N++ V R V + +++ Sbjct: 1502 NGDYTGFDTATPRVLMMKIADMVSNL---AGDGRENAIVRRNLMKMAVERRILVLRDLYQ 1558 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLA----PKPEKCRFQQTVCLI-VYGDDNLI 366 V G PSGFALTV++NSV N+ + +A+RK+ P R ++ C VYGDDN++ Sbjct: 1559 VKGGTPSGFALTVIINSVVNQFYLMWAWRKIMSRIDPGLVPYRVMRSHCTFSVYGDDNVV 1618 Query: 367 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 546 S + +N I L V ++DG K ++ F ELDFLKR+++ Sbjct: 1619 SFSLQVKDMYNLVTIAAELKTIGVNLSDGK-KTGNLVKWMEFSELDFLKRRWVLYSGQGF 1677 Query: 547 QAPLDMTAI 573 PL +AI Sbjct: 1678 LCPLHKSAI 1686 [109][TOP] >UniRef100_Q1LZW4 Non-structural polyprotein n=1 Tax=Taura syndrome virus RepID=Q1LZW4_9VIRU Length = 2107 Score = 86.3 bits (212), Expect = 2e-15 Identities = 62/192 (32%), Positives = 94/192 (48%), Gaps = 4/192 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 ++ I D+S FDG LN+Q++ ++ ++ Y G+ R+ +L L + Sbjct: 1833 DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLLEYLFNATWLMNG 1889 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 357 KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 537 +L SV+ + WFN AI +A + TD + +P + E+ FLKR+F+ D Sbjct: 1950 SLCSVSDKVSEWFNQHAITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008 Query: 538 GVIQAPLDMTAI 573 I APL I Sbjct: 2009 FWI-APLSRNTI 2019 [110][TOP] >UniRef100_Q1G659 Polyprotein n=2 Tax=Black raspberry necrosis virus RepID=Q1G659_9SECO Length = 2163 Score = 86.3 bits (212), Expect = 2e-15 Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 6/190 (3%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N DYS FD Q++ A++I++L A ++V R N++ V R V +++ Sbjct: 1563 NGDYSGFDTGTPRQLLLKFADLISELAADGRRNKVI---RRNLMQLAVDRRILVLAELYH 1619 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRK----LAPKPEKCRFQQTVCLI-VYGDDNLI 366 V G PSGFALTV++NS+ N+ + +A+RK ++P R +T C VYGDDN++ Sbjct: 1620 VRGGTPSGFALTVIINSMVNQFYLMWAWRKIMSRISPSMVTYRVMRTHCTFSVYGDDNVV 1679 Query: 367 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTG-V 543 S + + +N I L V ++DG K I+ F +LDFLKR++ +L+ G Sbjct: 1680 SFSLAVRDMYNLCTIADELKTIGVTLSDGK-KTGVLIKWTGFKDLDFLKRRW-ELEPGHG 1737 Query: 544 IQAPLDMTAI 573 + PLD AI Sbjct: 1738 FKCPLDKMAI 1747 [111][TOP] >UniRef100_Q5MH31 Polyprotein n=1 Tax=Maize chlorotic dwarf virus RepID=Q5MH31_9SECO Length = 3481 Score = 85.9 bits (211), Expect = 2e-15 Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 12/194 (6%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 DYS FDG+ + Q+ I ++N Y + E R+ ++ +++ R V + +F+ Sbjct: 3167 DYSKFDGIGDPQIYHSITQVVNNWY---NDGEENARTRHALISSIIHREGIVKEYLFQYC 3223 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAYRK------LAPKPEKCRFQQTVCLIVYGDDNLIS 369 G+PSGFA+TV+ NS N + A+ L+P+ F + ++VYGDDN++S Sbjct: 3224 QGMPSGFAMTVIFNSFVNYYYLAMAWMNLISSSPLSPQSTLRDFDEYCKVVVYGDDNIVS 3283 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWEL---DFLKRKFLKLD-- 534 V+ ++N + L++ V TD D P +S P+ ++ FLKR++ + Sbjct: 3284 VSEEFIPYYNLRMVAAYLSQFGVTYTD--DAKNPIEKSVPWVDIRTVSFLKRRWTSIGGQ 3341 Query: 535 -TGVIQAPLDMTAI 573 + + +APL+ T+I Sbjct: 3342 LSTIYKAPLETTSI 3355 [112][TOP] >UniRef100_Q09X76 Nonstructural polyprotein n=1 Tax=Taura syndrome virus RepID=Q09X76_9VIRU Length = 2107 Score = 85.5 bits (210), Expect = 3e-15 Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 4/192 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 ++ I D+S FDG LN+Q++ ++ ++ Y G+ R+ +L L + Sbjct: 1833 DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLLEYLFNATWLMNG 1889 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 357 KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVARIFYGDD 1949 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 537 +L SV+ + WFN I +A + TD + +P + E+ FLKR+F+ D Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLSEVTFLKREFVLRDQ 2008 Query: 538 GVIQAPLDMTAI 573 I APL I Sbjct: 2009 FWI-APLSQNTI 2019 [113][TOP] >UniRef100_Q91NQ2 Non-structural polyprotein n=1 Tax=Taura syndrome virus RepID=Q91NQ2_9VIRU Length = 2107 Score = 85.1 bits (209), Expect = 4e-15 Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 4/192 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 ++ I D+S FDG LN+Q++ ++ ++ Y G+ R+ +L L + Sbjct: 1833 DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLLEYLFNATWLMNG 1889 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 357 KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 537 +L SV+ + WFN I +A + TD + +P + E+ FLKR+F+ D Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLSEVTFLKREFVLRDH 2008 Query: 538 GVIQAPLDMTAI 573 I APL I Sbjct: 2009 FWI-APLSRNTI 2019 [114][TOP] >UniRef100_Q5DM98 Non-structural polyprotein n=1 Tax=Taura syndrome virus RepID=Q5DM98_9VIRU Length = 2107 Score = 84.7 bits (208), Expect = 5e-15 Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 4/192 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 ++ I D+S FDG LN+Q++ ++ ++ Y G+ R+ +L L + Sbjct: 1833 DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLLEYLFNATWLMNG 1889 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 357 KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 537 +L SV+ + WFN I +A + TD + +P + E+ FLKR+F+ D Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008 Query: 538 GVIQAPLDMTAI 573 I APL I Sbjct: 2009 FWI-APLSRNTI 2019 [115][TOP] >UniRef100_Q4JFT3 Non-structural polyprotein n=1 Tax=Taura syndrome virus RepID=Q4JFT3_9VIRU Length = 2107 Score = 84.7 bits (208), Expect = 5e-15 Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 4/192 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 ++ I D+S FDG LN+Q++ ++ ++ Y G+ R+ +L L + Sbjct: 1833 DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLLEYLFNATWLMNG 1889 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 357 KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 537 +L SV+ + WFN I +A + TD + +P + E+ FLKR+F+ D Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008 Query: 538 GVIQAPLDMTAI 573 I APL I Sbjct: 2009 FWI-APLSRNTI 2019 [116][TOP] >UniRef100_A6NA62 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato torrado virus RepID=A6NA62_9SECO Length = 216 Score = 84.0 bits (206), Expect = 8e-15 Identities = 61/182 (33%), Positives = 87/182 (47%), Gaps = 10/182 (5%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVG 186 ++ + DYS+FDG + ++++ Y S A R+ +LM Y Sbjct: 36 SDTGFSADYSSFDGRAPIFAFQWFCDLVDDYYGSPPGSPDSNA-RHVLLMMASCHYTICE 94 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLI 342 KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K + + Sbjct: 95 NKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVA 154 Query: 343 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESK--PFWELDFLKR 516 VYGDDNL++V P W+ AI L V I +G DK+ SK EL FL R Sbjct: 155 VYGDDNLVAV-PMELQWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSELTFLSR 213 Query: 517 KF 522 F Sbjct: 214 GF 215 [117][TOP] >UniRef100_Q6EEL1 Polyprotein n=1 Tax=Maize chlorotic dwarf virus RepID=Q6EEL1_9SECO Length = 3457 Score = 82.8 bits (203), Expect = 2e-14 Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 12/194 (6%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 DYS FDG+ + Q+ I ++N Y + E R+ ++ +++ R V + +F+ Sbjct: 3143 DYSKFDGIGDPQIYHSITQVVNNWY---NDGEENATIRHALISSIIHRRGIVKEYLFQYC 3199 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAYRK------LAPKPEKCRFQQTVCLIVYGDDNLIS 369 G+PSGFA+TV+ NS N + A+ L+P+ F + +IVYGDDN+++ Sbjct: 3200 QGMPSGFAMTVIFNSFMNYYYLSLAWMNLISASPLSPQASLRYFDEYCKVIVYGDDNIVA 3259 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELD---FLKRKFLKLD-- 534 V ++N + L++ V TD D P +S+ + +++ FLKR+++ L Sbjct: 3260 VNEEFLEYYNLRLVAGYLSQFGVSYTD--DAKNPIEKSERYVKIEDVTFLKRRWVSLGGR 3317 Query: 535 -TGVIQAPLDMTAI 573 + + +APLD +I Sbjct: 3318 ASMLYKAPLDKVSI 3331 [118][TOP] >UniRef100_UPI0001765C94 RNA-dependent RNA polymerase n=1 Tax=Tomato marchitez virus RepID=UPI0001765C94 Length = 249 Score = 82.4 bits (202), Expect = 2e-14 Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 11/176 (6%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 + DYS+FDG + +++++ Y S A R+ +LM Y KVF+ Sbjct: 77 SADYSSFDGRAPVFAFQWFCDLVDEYYGSKPGSPDSNA-RHALLMMASCHYTLCEDKVFR 135 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQQTVCLIVYGD 354 + G+PSGFALTV+ NS+ NE +RYA+ L +P + F Q + + VYGD Sbjct: 136 LVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFNQ-LFIAVYGD 194 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIESKPFWELDFLKR 516 DNL++V P W++ I L V I +G DK D ++ + EL FL R Sbjct: 195 DNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSELTFLSR 249 [119][TOP] >UniRef100_B4ZF30 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cycas necrotic stunt virus RepID=B4ZF30_CNSV Length = 73 Score = 79.7 bits (195), Expect = 1e-13 Identities = 39/73 (53%), Positives = 50/73 (68%) Frame = +1 Query: 244 VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 423 +NSV NEIL+RY ++ L P++ F V L+VYGDDNL+S A +FNGE I+ TL Sbjct: 1 INSVLNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNLMSCTDKIAIYFNGETIKETL 60 Query: 424 AEKKVKITDGSDK 462 +K V ITDGSDK Sbjct: 61 KKKNVTITDGSDK 73 [120][TOP] >UniRef100_B1PM64 Polyprotein (Fragment) n=1 Tax=Tomato torrado virus RepID=B1PM64_9SECO Length = 910 Score = 79.7 bits (195), Expect = 1e-13 Identities = 55/168 (32%), Positives = 81/168 (48%), Gaps = 8/168 (4%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVG 186 ++ + DYS+FDG + ++++ Y S A R+ +LM Y Sbjct: 127 SDTGFSADYSSFDGRAPIFAFQWFCDLVDDYYGSPPGSPDSNA-RHVLLMMASCHYTICE 185 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLI 342 KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K + + Sbjct: 186 NKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVA 245 Query: 343 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESK 486 VYGDDNL++V P W+ AI L V I +G DK+ SK Sbjct: 246 VYGDDNLVAV-PMELHWYTLPAIAQELEVVNVIIKNGIDKNMDVSSSK 292 [121][TOP] >UniRef100_UPI0000167D17 RNA-dependent RNA polymerase n=1 Tax=Parsnip yellow fleck virus RepID=UPI0000167D17 Length = 813 Score = 79.0 bits (193), Expect = 3e-13 Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 12/196 (6%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N D++ FDG+ + ++ + N Y +R N+ L R++ + + + Sbjct: 306 NGDFANFDGMFHPSSFSMVSELANIFYG-----NFLSTERDNLTRMLTNRFSLMKGAILR 360 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQTVCLIVYGDDNL 363 V G PSGF +TV+ NS N ++ A+ LA C F + V VYGDDN+ Sbjct: 361 VPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKYVRACVYGDDNI 420 Query: 364 ISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPF---WELDFLKRKFL-- 525 +++ W+N + + L + V +TDG+ A E+KP+ E DFLKR F Sbjct: 421 VAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILEFDFLKRHFKAD 478 Query: 526 KLDTGVIQAPLDMTAI 573 +L + APL +I Sbjct: 479 ELIPSLFHAPLHKRSI 494 [122][TOP] >UniRef100_Q05057 Probable RNA-directed RNA polymerase n=1 Tax=Parsnip yellow fleck virus (isolate P-121) RepID=POLG_PYFV1 Length = 3027 Score = 79.0 bits (193), Expect = 3e-13 Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 12/196 (6%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N D++ FDG+ + ++ + N Y +R N+ L R++ + + + Sbjct: 2520 NGDFANFDGMFHPSSFSMVSELANIFYG-----NFLSTERDNLTRMLTNRFSLMKGAILR 2574 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQTVCLIVYGDDNL 363 V G PSGF +TV+ NS N ++ A+ LA C F + V VYGDDN+ Sbjct: 2575 VPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKYVRACVYGDDNI 2634 Query: 364 ISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPF---WELDFLKRKFL-- 525 +++ W+N + + L + V +TDG+ A E+KP+ E DFLKR F Sbjct: 2635 VAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILEFDFLKRHFKAD 2692 Query: 526 KLDTGVIQAPLDMTAI 573 +L + APL +I Sbjct: 2693 ELIPSLFHAPLHKRSI 2708 [123][TOP] >UniRef100_B6UIR8 Polyprotein n=1 Tax=Carrot necrotic dieback virus RepID=B6UIR8_9SECO Length = 3015 Score = 76.6 bits (187), Expect = 1e-12 Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 12/196 (6%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N D++ FDG+ + + +A + N Y Q +R ++ AL R++ V V + Sbjct: 2511 NGDFANFDGMFHPTSFDMVAELANIFYG-----GFQSDERTSLTKALTNRFSLVKGGVLR 2565 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK------CRFQQTVCLIVYGDDNL 363 ++ G PSGF +TV+ NS N ++ A+ LA + + F V VYGDDN+ Sbjct: 2566 ISGGGPSGFPMTVIFNSFINLFYLQSAWIMLASQNGRSDISCPSNFPSFVRACVYGDDNI 2625 Query: 364 ISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPFWEL---DFLKRKFL-- 525 +++ W+N + + L + V +TDG+ A ++P+ ++ DFLKR F Sbjct: 2626 VAIKNEVLPWYNLQTVSKILKDYFGVTMTDGAKNCAE--NAQPYGKILDFDFLKRNFRPD 2683 Query: 526 KLDTGVIQAPLDMTAI 573 +L + APL +I Sbjct: 2684 ELIPSLFHAPLHKRSI 2699 [124][TOP] >UniRef100_A7KCA2 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-B RepID=A7KCA2_9VIRU Length = 1614 Score = 75.5 bits (184), Expect = 3e-12 Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 3/193 (1%) Frame = +1 Query: 4 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV 183 G + I DY AFD ++ + I ++I LSG + Q + A +A V Sbjct: 1216 GEDRVIAGDYKAFDKRMSPKEILAAFDIIIYFCQLSGNYSEEDIQIIRCI-AEDTAFALV 1274 Query: 184 GQK--VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDD 357 + ++ PSG LTV++NS+ N + +RY Y L P+ F+ V L+ YGDD Sbjct: 1275 DYNGDLVQLYGSNPSGNPLTVILNSIVNSLRMRYVYFMLNPEHTVTTFKDNVNLMTYGDD 1334 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD- 534 N++SV+ C WFN +I T A + T +DK++ ++ + FLKR + D Sbjct: 1335 NIMSVSREC-DWFNHTSISETFATLNIVYT-MADKESASVPFINIKDASFLKRTWRMDDQ 1392 Query: 535 TGVIQAPLDMTAI 573 G APL+ +I Sbjct: 1393 LGCYVAPLEEESI 1405 [125][TOP] >UniRef100_Q0PWW5 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Lettuce mottle virus RepID=Q0PWW5_9VIRU Length = 187 Score = 73.9 bits (180), Expect = 8e-12 Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 6/132 (4%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N D++ FDG+ + + + + ++ NK Y G+S + A+R + AL R + V V Sbjct: 46 NGDFANFDGMFHPEAFDMVCDLANKFY---GDS--RGAERKCLTEALTNRLSLVKGSVLS 100 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK------PEKCRFQQTVCLIVYGDDNL 363 + G PSGF +TV+ NS N ++ A+ +LA + C +++ V VYGDDN+ Sbjct: 101 IGGGGPSGFPMTVIFNSFINLFYLQAAWIQLAKEHGRNDIAHPCFYKKFVRAYVYGDDNI 160 Query: 364 ISVAPSCASWFN 399 +S+ SW+N Sbjct: 161 VSIKEEVISWYN 172 [126][TOP] >UniRef100_Q0PWW6 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Lettuce mottle virus RepID=Q0PWW6_9VIRU Length = 292 Score = 73.2 bits (178), Expect = 1e-11 Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 6/132 (4%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N D++ FDG+ + + + ++ NK Y G+S + A+R + AL R + V V Sbjct: 151 NGDFANFDGMFHPDAFDMVCDLANKFY---GDS--RGAERKCLTEALTNRLSLVKGSVLS 205 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK------PEKCRFQQTVCLIVYGDDNL 363 + G PSGF +TV+ NS N ++ A+ +LA + C +++ V VYGDDN+ Sbjct: 206 IGGGGPSGFPMTVIFNSFINLFYLQAAWIQLAKEHGRSDIAHPCFYKKFVRAYVYGDDNI 265 Query: 364 ISVAPSCASWFN 399 +S+ SW+N Sbjct: 266 VSIKEEVISWYN 277 [127][TOP] >UniRef100_A5A104 Polyprotein n=1 Tax=Brevicoryne brassicae picorna-like virus RepID=A5A104_9VIRU Length = 2983 Score = 72.8 bits (177), Expect = 2e-11 Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 6/191 (3%) Frame = +1 Query: 19 INCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVF 198 I DYS F LN++V+ +I K Y G S R M L+ + ++ Sbjct: 2718 ITGDYSGFGPSLNSEVVTAAFRIICKWYKQYGCSVEDNHIRMMMSKELINAKHLMRDYLY 2777 Query: 199 KVNCGLPSGFALTVVVNSVFNEILIRYAY---RKLAPKPEKCRFQQTVCLIVYGDDNLIS 369 +V CGLPSG TV+ NS+ N I IR A+ + + F+ + LI YGDD + S Sbjct: 2778 EVQCGLPSGNPATVIFNSIVNSIYIRCAWLDVMRNSSYKSLLDFRNNIKLITYGDDLIAS 2837 Query: 370 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWE-LDFLKRKFL--KLDTG 540 + S + FN ++ + +K TD + K +E + E FLK F + G Sbjct: 2838 IDNSVSDKFNNNSLSHFFLKHNIKFTDAA-KTGVNVEPYIYLETATFLKHAFKPHPIRQG 2896 Query: 541 VIQAPLDMTAI 573 V A L+ +I Sbjct: 2897 VYLAQLEELSI 2907 [128][TOP] >UniRef100_Q4QZ13 Putative polymerase (Fragment) n=1 Tax=Lettuce mottle virus RepID=Q4QZ13_9VIRU Length = 187 Score = 72.0 bits (175), Expect = 3e-11 Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 6/132 (4%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N D++ FDG+ + E + ++ NK Y G+S + +R + AL R + + V Sbjct: 46 NGDFANFDGMFHPDAFEMVCDLANKFY---GDS--RGPERKCLTEALTNRLSLIKGSVLS 100 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK------PEKCRFQQTVCLIVYGDDNL 363 + G PSGF +TV+ NS N ++ A+ +LA + C +++ V VYGDDN+ Sbjct: 101 IGGGGPSGFPMTVIFNSFINLFYLQAAWIQLAKEHGRDDIAHPCFYKKFVRAYVYGDDNI 160 Query: 364 ISVAPSCASWFN 399 +S+ SW+N Sbjct: 161 VSIKEEVISWYN 172 [129][TOP] >UniRef100_C1K2M4 Protease/RNA-dependent RNA polymerase (Fragment) n=1 Tax=Nasonia vitripennis virus RepID=C1K2M4_9VIRU Length = 787 Score = 71.6 bits (174), Expect = 4e-11 Identities = 54/152 (35%), Positives = 74/152 (48%), Gaps = 7/152 (4%) Frame = +1 Query: 139 RYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAP-K 303 RY M+ L+ V + + N G+PSG A TV+ NS N I IR AY RK AP Sbjct: 560 RYTMIEELINPLNIVKDCIVRFNTGMPSGNAGTVITNSECNSIYIRCAYLGLARKYAPVL 619 Query: 304 PEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES 483 + F+Q V + GDD +++V P SWFN + ++ +K+TD K E Sbjct: 620 ADLYWFKQYVRMFSNGDDLIMAVKPDIISWFNNRTLIDFFSQHNIKMTDAL-KSGKVREF 678 Query: 484 KPFWELDFLKRKFLKLDT--GVIQAPLDMTAI 573 E +LKR F K T G APL+ +I Sbjct: 679 CSLEEATYLKRGFKKHPTRPGEWLAPLERASI 710 [130][TOP] >UniRef100_Q0EDJ7 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ7_9VIRU Length = 297 Score = 71.2 bits (173), Expect = 5e-11 Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 262 ANLDKVSV 269 [131][TOP] >UniRef100_Q0EDJ3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ3_9VIRU Length = 297 Score = 71.2 bits (173), Expect = 5e-11 Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 262 ANLDKVSV 269 [132][TOP] >UniRef100_B3F388 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F388_9VIRU Length = 139 Score = 71.2 bits (173), Expect = 5e-11 Identities = 35/77 (45%), Positives = 49/77 (63%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV++NS+ N + +RYAY L PK E F++ V L+ YGDDN++SV+P+ A W+ Sbjct: 59 PSGHPLTVIINSLVNSLYMRYAYCLLNPKHEVSSFKENVSLMTYGDDNIMSVSPT-APWY 117 Query: 397 NGEAIRVTLAEKKVKIT 447 N AI A + T Sbjct: 118 NHTAIAAAFATMDITYT 134 [133][TOP] >UniRef100_Q6A2S7 Polyprotein (Fragment) n=1 Tax=Arracacha virus B RepID=Q6A2S7_9SECO Length = 251 Score = 70.9 bits (172), Expect = 7e-11 Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 7/107 (6%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLY------ALSGESEVQQAQRYNMLMALVG-RYAF 180 N DYS FDG+ V++ +A I+K Y L + +++ + +++L+ + RY Sbjct: 135 NGDYSRFDGITPRCVLQGLAIRISKFYRQDEAQGLVPKKKIRTSVAHSLLLDMANSRYGI 194 Query: 181 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRF 321 G V+KV+ G+PSGF LTV+VNS+ N + +AYRKL + K F Sbjct: 195 AGLGVYKVSSGIPSGFPLTVIVNSLVNSFFLHFAYRKLMSQSLKSHF 241 [134][TOP] >UniRef100_Q9IJX4 Nonstructural polyprotein n=1 Tax=Cricket paralysis virus RepID=Q9IJX4_CRPV Length = 1771 Score = 70.5 bits (171), Expect = 9e-11 Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 13/185 (7%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVI-ECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV- 183 N+ I D+ FDG L AQ + + + + +R LM +G + + Sbjct: 1495 NKVIAGDFGNFDGSLVAQFFGQSCGKSFYPWFKTFNDVNTEDGKRN--LMICIGLWTHIV 1552 Query: 184 ------GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCR-FQQT 330 G V+ PSG TV++N ++N +++R + RKLAP+ + + F++ Sbjct: 1553 HSVHSYGDNVYMWTHSQPSGNPFTVIINCLYNSMIMRIVWILLARKLAPEMQSMKKFREN 1612 Query: 331 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFL 510 V +I YGDDN ++++ WFN I + E K + TD K ++ E+ FL Sbjct: 1613 VSMISYGDDNCLNISDRVVEWFNQITISEQMKEIKHEYTD-EGKTGDMVKFPSLSEIHFL 1671 Query: 511 KRKFL 525 K++F+ Sbjct: 1672 KKRFV 1676 [135][TOP] >UniRef100_Q8B3M2 Polyprotein n=1 Tax=Deformed wing virus RepID=Q8B3M2_9VIRU Length = 2893 Score = 70.5 bits (171), Expect = 9e-11 Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 2815 ANLDKVSV 2822 [136][TOP] >UniRef100_Q7TG18 Polyprotein n=1 Tax=Deformed wing virus RepID=Q7TG18_9VIRU Length = 2893 Score = 70.5 bits (171), Expect = 9e-11 Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 2815 ANLDKVSV 2822 [137][TOP] >UniRef100_Q6XMI0 Polyprotein (Fragment) n=1 Tax=Deformed wing virus RepID=Q6XMI0_9VIRU Length = 1566 Score = 70.5 bits (171), Expect = 9e-11 Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 1382 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 1440 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 1441 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 1499 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 1500 ANLDKVSV 1507 [138][TOP] >UniRef100_Q0EDK8 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK8_9VIRU Length = 297 Score = 70.5 bits (171), Expect = 9e-11 Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 262 ANLDKVSV 269 [139][TOP] >UniRef100_Q0EDI6 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDI6_9VIRU Length = 297 Score = 70.5 bits (171), Expect = 9e-11 Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 262 ANLDKVSV 269 [140][TOP] >UniRef100_A0ZSE7 Polyprotein (Fragment) n=13 Tax=Kakugo virus RepID=A0ZSE7_9VIRU Length = 297 Score = 70.5 bits (171), Expect = 9e-11 Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 262 ANLDKVSV 269 [141][TOP] >UniRef100_Q0EDK3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK3_9VIRU Length = 297 Score = 70.1 bits (170), Expect = 1e-10 Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 262 ANLDKISV 269 [142][TOP] >UniRef100_Q0EDI5 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDI5_9VIRU Length = 297 Score = 70.1 bits (170), Expect = 1e-10 Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGVTDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 262 ANLDKVSV 269 [143][TOP] >UniRef100_Q0EDJ0 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ0_9VIRU Length = 297 Score = 69.7 bits (169), Expect = 2e-10 Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T + N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDIXNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 262 ANLDKVSV 269 [144][TOP] >UniRef100_A0ZSF1 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=A0ZSF1_9VIRU Length = 297 Score = 69.7 bits (169), Expect = 2e-10 Identities = 40/115 (34%), Positives = 64/115 (55%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 537 + + FN I ++ K++ TD DK T++ + FLK FLK T Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEXTD-QDKSGNTVKWRTLQTATFLKHGFLKHPT 256 [145][TOP] >UniRef100_Q9DSN9 Replicase polyprotein n=1 Tax=Acute bee paralysis virus RepID=Q9DSN9_9VIRU Length = 1906 Score = 69.3 bits (168), Expect = 2e-10 Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 17/199 (8%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 D+S FDG LN ++E A++ N+ Y E+ + R+ +LM + G V+ + Sbjct: 1644 DFSTFDGSLNVCIMEKFADLANEFYDDGSENALI---RHVLLMDVYNSTHICGDSVYMMT 1700 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCR----FQQTVCLIVYGDDN 360 PSG T +N N + +R + + K KC F + V ++ YGDDN Sbjct: 1701 HSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKCYVMKDFSKHVSIVSYGDDN 1760 Query: 361 LISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIESKPFWELDFLKRKF 522 +I+ + + WFN E I + TD G + + P TIE ++ +LKRKF Sbjct: 1761 VINFSDEVSEWFNMETITEAFEKLGFTYTDELKGKNGEVPKWRTIE-----DVQYLKRKF 1815 Query: 523 LKLDT--GVIQAPLDMTAI 573 + D+ V +APL M I Sbjct: 1816 -RYDSKRKVWEAPLCMDTI 1833 [146][TOP] >UniRef100_Q0EDK9 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK9_9VIRU Length = 297 Score = 69.3 bits (168), Expect = 2e-10 Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGXTDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 262 ANLDKVSV 269 [147][TOP] >UniRef100_Q0EDJ8 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ8_9VIRU Length = 297 Score = 69.3 bits (168), Expect = 2e-10 Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K+ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMGFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 262 ANLDKVSV 269 [148][TOP] >UniRef100_A1X599 Polyprotein (Fragment) n=1 Tax=Deformed wing virus RepID=A1X599_9VIRU Length = 205 Score = 69.3 bits (168), Expect = 2e-10 Identities = 40/115 (34%), Positives = 64/115 (55%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 90 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 148 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 537 + + FN I ++ K++ TD DK T++ + FLK FLK T Sbjct: 149 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPT 202 [149][TOP] >UniRef100_A0ZSF0 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=A0ZSF0_9VIRU Length = 297 Score = 69.3 bits (168), Expect = 2e-10 Identities = 40/115 (34%), Positives = 64/115 (55%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 537 + + FN I ++ K++ TD DK T++ + FLK FLK T Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPT 256 [150][TOP] >UniRef100_Q0EDK4 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK4_9VIRU Length = 297 Score = 68.9 bits (167), Expect = 3e-10 Identities = 40/115 (34%), Positives = 64/115 (55%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 537 + + FN I ++ K++ TD DK T++ + FLK FLK T Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEXTD-QDKSGNTVKWRTLQTATFLKHGFLKHPT 256 [151][TOP] >UniRef100_Q8BDE0 Replicase polyprotein n=1 Tax=Acute bee paralysis virus RepID=Q8BDE0_9VIRU Length = 1904 Score = 68.6 bits (166), Expect = 3e-10 Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 17/199 (8%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 D+S FDG LN ++E A++ N+ Y E+ + R+ +LM + G V+ + Sbjct: 1642 DFSTFDGSLNVCIMEKFADLANEFYDDGPENALI---RHVLLMDVYNSTHVCGDSVYMMT 1698 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR---------FQQTVCLIVYGDDN 360 PSG T +N N + +R + + K F + V ++ YGDDN Sbjct: 1699 HSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKRYVMKDFSKHVSIVSYGDDN 1758 Query: 361 LISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIESKPFWELDFLKRKF 522 +I+ + + WFN E I + TD G++ + P TIE ++ +LKRKF Sbjct: 1759 VINFSDEVSEWFNMETITEAFEKLGFTYTDELKGNNGEVPKWRTIE-----DVQYLKRKF 1813 Query: 523 LKLDT--GVIQAPLDMTAI 573 + D+ V +APL M I Sbjct: 1814 -RYDSKRKVWEAPLSMDTI 1831 [152][TOP] >UniRef100_O36966 Replicase polyprotein n=1 Tax=Drosophila C virus RepID=O36966_9VIRU Length = 1759 Score = 68.6 bits (166), Expect = 3e-10 Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 12/177 (6%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV-------G 186 D+ FDG L AQ++ I I ++ L +++ ++ +L +G ++ + Sbjct: 1489 DFGNFDGSLVAQILWAIFWEIFVVW-LKQFIDIENSEGKRILCICLGLWSHLVHSVHIYE 1547 Query: 187 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCR-FQQTVCLIVYG 351 V+ PSG TV++N ++N I++R ++ K P+ + + F + V LI YG Sbjct: 1548 DNVYMWTHSQPSGNPFTVIINCLYNSIIMRLSWIRVMEKFQPRLKSMKWFNEYVALITYG 1607 Query: 352 DDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF 522 DDN++++ WFN I + E + + TD + K ++S+ ++ FLKRKF Sbjct: 1608 DDNVLNIDAKVVEWFNQINISEVMTEMRHEYTDEA-KTGDIVKSRKLEDIFFLKRKF 1663 [153][TOP] >UniRef100_B1A455 Replication-associated polyprotein (Fragment) n=1 Tax=Black raspberry necrosis virus RepID=B1A455_9SECO Length = 983 Score = 68.6 bits (166), Expect = 3e-10 Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 5/149 (3%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N DYS FD Q+ +++I+ L A ++V R N++ V R V +++ Sbjct: 822 NGDYSGFDTGTPRQLSLKFSDLISDLAADGRRNKVI---RRNLMQLAVDRRILVLSELYH 878 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRK----LAPKPEKCRFQQTVCLI-VYGDDNLI 366 V G PSGFALTV++NS+ N+ + +A+RK ++P R ++ C VYGDDN++ Sbjct: 879 VRGGTPSGFALTVIINSMVNQFYLMWAWRKIMARISPSMVTYRIMRSHCTFSVYGDDNVV 938 Query: 367 SVAPSCASWFNGEAIRVTLAEKKVKITDG 453 S + + +N I L V ++DG Sbjct: 939 SFSLAVRDMYNLCTIADELKTIGVTLSDG 967 [154][TOP] >UniRef100_Q8BDE1 Replicase polyprotein n=1 Tax=Acute bee paralysis virus RepID=Q8BDE1_9VIRU Length = 1904 Score = 68.2 bits (165), Expect = 4e-10 Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 16/198 (8%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 D+S FDG LN ++E A++ N+ Y E+ + R+ +LM + G V+ + Sbjct: 1642 DFSTFDGSLNVCIMEKFADLANEFYDDGPENALI---RHVLLMDVYNSTHICGDSVYMMT 1698 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR---------FQQTVCLIVYGDDN 360 PSG T +N N + +R + + K F + V ++ YGDDN Sbjct: 1699 HSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKRYVMKDFSKHVSIVSYGDDN 1758 Query: 361 LISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIESKPFWELDFLKRKF 522 +I+ + + WFN E I + TD G++ + P TIE ++ +LKRKF Sbjct: 1759 VINFSDEVSEWFNMETITEAFEKLGFTYTDELKGNNGEVPKWRTIE-----DVQYLKRKF 1813 Query: 523 -LKLDTGVIQAPLDMTAI 573 V +APL M I Sbjct: 1814 RYDFKRKVWEAPLCMDTI 1831 [155][TOP] >UniRef100_Q7TFA5 Polyprotein n=1 Tax=Varroa destructor virus 1 RepID=Q7TFA5_9VIRU Length = 2893 Score = 68.2 bits (165), Expect = 4e-10 Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 5/187 (2%) Frame = +1 Query: 28 DYSAF----DGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKV 195 DY F D + A E I + + Y + + + + M ++ V Sbjct: 2639 DYKNFGPGLDSDVAASAFEIIIDWVLN-YTEEDDKDEMKRVMWTMAQEILAPSHLCRDLV 2697 Query: 196 FKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVA 375 ++V CG+PSG +T ++N++ N +LIR A++ + P F + V L+ YGDD +++V+ Sbjct: 2698 YRVPCGIPSGSPITDILNTISNCLLIRLAWQGITDLP-LSEFSRHVVLVCYGDDLIMNVS 2756 Query: 376 PSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQA 552 FN I + K++ TD DK T+ + FLK FLK T V A Sbjct: 2757 DEMIDKFNAVTIGDFFSRYKMEFTD-QDKSGNTVRWRTLQTATFLKHGFLKHPTRPVFLA 2815 Query: 553 PLDMTAI 573 LD +I Sbjct: 2816 NLDKVSI 2822 [156][TOP] >UniRef100_Q6WGS3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified picorna-like virus RepID=Q6WGS3_9PICO Length = 151 Score = 68.2 bits (165), Expect = 4e-10 Identities = 40/100 (40%), Positives = 59/100 (59%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 + + N PSG LTV++NS+ N + +RYAY L+P+ + F+ V L YGDDN+ V Sbjct: 50 IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLSPQKDLLTFKHHVALFTYGDDNICGV 109 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF 492 + CA +F I+ LAE ++ T +DK+A ES PF Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEA---ESVPF 144 [157][TOP] >UniRef100_B3TZF0 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees RepID=B3TZF0_9VIRU Length = 1950 Score = 68.2 bits (165), Expect = 4e-10 Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 8/196 (4%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ I D+S FDG LN ++E A++ N+ Y E+ + R+ +LM + Sbjct: 1687 NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGAENGLI---RHVLLMDVYNSVHICND 1743 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 357 V+ + PSG T +N N + +R + ++ A K F + V ++ YGDD Sbjct: 1744 SVYMMTHSQPSGNPATTPLNCFINSMGLRMCFAICAKEAAVKMTMKDFGKHVSMVSYGDD 1803 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAPTIESKPFWELDFLKRKF-L 525 N+I+ + W+N E I TD G++ + P S ++ +LKRKF Sbjct: 1804 NVINFSDEVCEWYNMETIAKAFETLGFTYTDELKGANGEVPKWRS--IKDVQYLKRKFRY 1861 Query: 526 KLDTGVIQAPLDMTAI 573 V +APL M I Sbjct: 1862 DEQRKVWEAPLCMDTI 1877 [158][TOP] >UniRef100_Q76LW4 Polyprotein n=1 Tax=Kakugo virus RepID=Q76LW4_9VIRU Length = 2893 Score = 67.8 bits (164), Expect = 6e-10 Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ ++ TD DK T++ + FLK FLK T V Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYEMVFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 2815 ANLDKVSV 2822 [159][TOP] >UniRef100_Q6WGR8 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified picorna-like virus RepID=Q6WGR8_9PICO Length = 151 Score = 67.8 bits (164), Expect = 6e-10 Identities = 40/100 (40%), Positives = 58/100 (58%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 + + N PSG LTV++NS+ N + +RYAY L P+ + F+ V L YGDDN+ V Sbjct: 50 IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYALNPQKDLLTFKHRVALFTYGDDNICGV 109 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF 492 + CA +F I+ LAE ++ T +DK+A ES PF Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEA---ESVPF 144 [160][TOP] >UniRef100_Q0PWW7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Dandelion yellow mosaic virus RepID=Q0PWW7_9VIRU Length = 262 Score = 67.8 bits (164), Expect = 6e-10 Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 12/196 (6%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N D++ FDG+ + + + Y G + ++ R + +L R + V V Sbjct: 74 NGDFANFDGMFHPDSFAMVEELATYFYR--GHNALE---RKTLTESLTNRLSLVKGAVLS 128 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR------FQQTVCLIVYGDDNL 363 + G PSGF +TV+ NS N + A+ LA + F++ V VYGDDN+ Sbjct: 129 IGGGGPSGFPMTVIFNSYINLFYLMSAWSHLATDNGRVDIQHPSFFKKYVRACVYGDDNI 188 Query: 364 ISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPF---WELDFLKRKFL-- 525 +S+ SW+N ++ L + V +TDG +A +KP+ E DFLKR F Sbjct: 189 VSIKEEVISWYNLCSVSDFLKKAFGVTMTDGEKNEAHL--AKPYGKILEFDFLKRGFFPD 246 Query: 526 KLDTGVIQAPLDMTAI 573 + APL+ +I Sbjct: 247 SQIPSLFHAPLNKVSI 262 [161][TOP] >UniRef100_Q0EDJ6 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ6_9VIRU Length = 297 Score = 67.8 bits (164), Expect = 6e-10 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD ++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLXMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K++ TD D T++ + FLK FLK T V Sbjct: 203 SDNXIDXFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 262 ANLDKVSV 269 [162][TOP] >UniRef100_B3F389 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F389_9VIRU Length = 139 Score = 67.8 bits (164), Expect = 6e-10 Identities = 34/77 (44%), Positives = 46/77 (59%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV++NS+ N + IRY YR L PK E F+Q V L+ YGDDN++ ++ SWF Sbjct: 59 PSGHPLTVIINSLVNSLYIRYCYRMLNPKKEVITFKQNVNLMTYGDDNIMGISDK-ISWF 117 Query: 397 NGEAIRVTLAEKKVKIT 447 N +I L + T Sbjct: 118 NHTSIADCLGMANIVYT 134 [163][TOP] >UniRef100_Q80AG3 Non-structural polyprotein n=1 Tax=Kashmir bee virus RepID=Q80AG3_9VIRU Length = 1933 Score = 67.4 bits (163), Expect = 8e-10 Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 8/196 (4%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ I D+S FDG LN ++E A++ N+ Y E+ + R+ +LM + Sbjct: 1670 NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENALI---RHVLLMDVYNSVHVCND 1726 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYR----KLAPKPEKCRFQQTVCLIVYGDD 357 V+ + PSG T +N N + +R + K A K F + V L+ YGDD Sbjct: 1727 SVYMMTHSQPSGNPATTPLNCFINSMGLRMCFSICATKAAVKMTMRDFSKHVSLVSYGDD 1786 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAPTIESKPFWELDFLKRKF-L 525 N+I+ + ++W+N I + TD G + P S ++ +LKRKF Sbjct: 1787 NVINFSDEVSAWYNMSTIAEAFSTLGFTYTDELKGVRGEVPNWRS--IQDVQYLKRKFRY 1844 Query: 526 KLDTGVIQAPLDMTAI 573 V +APL M I Sbjct: 1845 DNQRKVWEAPLCMDTI 1860 [164][TOP] >UniRef100_Q6WGS5 RNA-dependent RNA polymerase (Fragment) n=2 Tax=unidentified picorna-like virus RepID=Q6WGS5_9PICO Length = 151 Score = 67.0 bits (162), Expect = 1e-09 Identities = 40/100 (40%), Positives = 58/100 (58%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 + + N PSG LTV++NS+ N + +RYAY L P+ + F+ V L YGDDN+ V Sbjct: 50 IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLNPQKDLLTFKHHVALFTYGDDNICGV 109 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF 492 + CA +F I+ LAE ++ T +DK+A ES PF Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEA---ESVPF 144 [165][TOP] >UniRef100_Q0EDJ5 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ5_9VIRU Length = 297 Score = 67.0 bits (162), Expect = 1e-09 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 1/128 (0%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD ++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLXMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 549 + + FN I ++ K++ TD D T++ + FLK FLK T V Sbjct: 203 SDNXIDKFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 550 APLDMTAI 573 A LD ++ Sbjct: 262 ANLDKVSV 269 [166][TOP] >UniRef100_Q9WCE9 Polyprotein n=1 Tax=Sacbrood virus RepID=Q9WCE9_9VIRU Length = 2858 Score = 66.6 bits (161), Expect = 1e-09 Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 4/156 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N DYS F NAQ+ + ++ + + + V + + Y +L + V Sbjct: 2595 NNICTIDYSNFGPGFNAQIAKAAMELMVR-WTMEHVEGVNEIEAYTLLHECLNSVHLVSN 2653 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVYGDD 357 +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L YGDD Sbjct: 2654 TLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCYGDD 2713 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 465 ++SV FN I LA+ + TD + D Sbjct: 2714 LIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 2749 [167][TOP] >UniRef100_Q0EDK2 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK2_9VIRU Length = 297 Score = 66.6 bits (161), Expect = 1e-09 Identities = 39/115 (33%), Positives = 63/115 (54%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEXSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 537 + + FN I ++ K++ TD DK T++ + FLK FLK T Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPT 256 [168][TOP] >UniRef100_Q0EDK1 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK1_9VIRU Length = 297 Score = 66.6 bits (161), Expect = 1e-09 Identities = 39/115 (33%), Positives = 63/115 (54%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 V++V CG+PSG +T ++N++ N +LIR A+ + P Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEXSQNVVLVCYGDDLIMNV 202 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 537 + + FN I ++ K++ TD DK T++ + FLK FLK T Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPT 256 [169][TOP] >UniRef100_B3TZL6 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees RepID=B3TZL6_9VIRU Length = 1950 Score = 66.6 bits (161), Expect = 1e-09 Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 8/196 (4%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ I D+S FDG LN ++E A++ N+ Y E+ + R+ +LM + Sbjct: 1687 NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGAENSLI---RHVLLMDVYNSVHICND 1743 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 357 V+ + PSG T +N N + +R + R K F + V ++ YGDD Sbjct: 1744 SVYMMTHSQPSGNPATTPLNCFINSMGLRMCFAICARNAGIKMTMKDFGKHVSMVSYGDD 1803 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAPTIESKPFWELDFLKRKF-L 525 N+I+ + W+N E I TD G + + P S ++ +LKRKF Sbjct: 1804 NVINFSDEVCEWYNMETIAKAFETLGFTYTDELKGVNGEVPKWRS--IKDVQYLKRKFRY 1861 Query: 526 KLDTGVIQAPLDMTAI 573 V +APL M I Sbjct: 1862 DEQRKVWEAPLCMDTI 1877 [170][TOP] >UniRef100_B3F394 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F394_9VIRU Length = 138 Score = 66.6 bits (161), Expect = 1e-09 Identities = 30/71 (42%), Positives = 47/71 (66%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV++N + N + +RY Y KL+P+ F++ V ++ YGDDN++ V+ S A WF Sbjct: 58 PSGHPLTVIINGLANSLYLRYCYAKLSPEANCVNFKRDVAVMTYGDDNIMGVSDS-APWF 116 Query: 397 NGEAIRVTLAE 429 N ++ TLA+ Sbjct: 117 NHTTLQSTLAD 127 [171][TOP] >UniRef100_Q5Y975 Nonstructural polyprotein n=1 Tax=Solenopsis invicta virus 1 RepID=Q5Y975_9VIRU Length = 1396 Score = 66.2 bits (160), Expect = 2e-09 Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 17/199 (8%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVN 207 D+S FDG LNA ++ A M N+ Y + RY ++ ++ Q + + Sbjct: 1130 DFSNFDGSLNAMIMYLFARMANEFY-----DDGNDLIRYVLIEEILNSVHLCEQFFYMMT 1184 Query: 208 CGLPSGFALTVVVNSVFNEILIRYAY---------------RKLAPKPEKCRFQQTVCLI 342 PSG T +N + N I +R + +K K F+ V LI Sbjct: 1185 HSQPSGNPATTPLNCLINSIGLRLCFLRCFEEHKAFFMELMKKFGCKTRMELFRLLVSLI 1244 Query: 343 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-ESKPFWELDFLKRK 519 YGDDN+I++ P + FN I AE TD + + + + K E+ FLKR Sbjct: 1245 SYGDDNVINIHPLISHLFNMNTITKYFAEFGFTYTDETKQVGKGVPDYKTLEEVSFLKRG 1304 Query: 520 FL-KLDTGVIQAPLDMTAI 573 F+ + APLD+ I Sbjct: 1305 FIFNEERNCYDAPLDINTI 1323 [172][TOP] >UniRef100_Q0EDJ2 Polyprotein (Fragment) n=2 Tax=Kakugo virus RepID=Q0EDJ2_9VIRU Length = 297 Score = 65.9 bits (159), Expect = 2e-09 Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 5/187 (2%) Frame = +1 Query: 28 DYSAF----DGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKV 195 DY F D + A E I + + + E+++ + M ++ V Sbjct: 86 DYKNFGPGLDSDVAASAFEIIIDWVLHYXEEDNKDEMKRVM-WTMAQEILAPSHLCRDLV 144 Query: 196 FKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVA 375 +V CG+PSG T ++N++ N +LIR A+ + P F Q V L+ YGDD ++V+ Sbjct: 145 XRVPCGIPSGSPXTDILNTISNCLLIRLAWLGITDXP-LSEFSQNVVLVCYGDDLXMNVS 203 Query: 376 PSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQA 552 + FN I ++ K++ TD D T++ + FLK FLK T V A Sbjct: 204 DNMIDXFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFLA 262 Query: 553 PLDMTAI 573 LD ++ Sbjct: 263 NLDKVSV 269 [173][TOP] >UniRef100_B3F397 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F397_9VIRU Length = 152 Score = 65.9 bits (159), Expect = 2e-09 Identities = 38/96 (39%), Positives = 57/96 (59%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV++NS+ N + +RYAY L P+ E F++ V L+ YGDDN+++V+ + W+ Sbjct: 59 PSGHPLTVIINSLVNSLYMRYAYIILNPEQESASFRKNVALLTYGDDNILTVSRN-IDWY 117 Query: 397 NGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELD 504 N I A+ + T DK+A ES PF L+ Sbjct: 118 NHTTITQAFADIGLVYT-MPDKEA---ESVPFLSLN 149 [174][TOP] >UniRef100_Q8QY61 Polyprotein n=1 Tax=Sacbrood virus RepID=Q8QY61_9VIRU Length = 2860 Score = 65.5 bits (158), Expect = 3e-09 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 4/153 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N DYS F NAQ+ + ++ + + + V + + Y +L + V Sbjct: 2597 NNICTIDYSNFGPGFNAQIAKAAMELMVR-WTMEHVEGVNEIEAYTLLHECLNSVHLVSN 2655 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVYGDD 357 +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L YGDD Sbjct: 2656 TLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCYGDD 2715 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGS 456 ++SV FN I LA+ + TD + Sbjct: 2716 LIMSVTDKYKDIFNALTISQFLAQYGIVATDAN 2748 [175][TOP] >UniRef100_B3F387 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F387_9VIRU Length = 139 Score = 65.5 bits (158), Expect = 3e-09 Identities = 33/77 (42%), Positives = 47/77 (61%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV++NS+ N + +RY Y L PK F++ V L+ YGDDN++ V+P A WF Sbjct: 59 PSGHPLTVIINSIVNSLYMRYCYVMLNPKFTVATFKKHVRLMTYGDDNIMGVSPD-ARWF 117 Query: 397 NGEAIRVTLAEKKVKIT 447 N AI L++ + T Sbjct: 118 NHTAIAKVLSDIDITYT 134 [176][TOP] >UniRef100_Q5S8C7 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees RepID=Q5S8C7_9VIRU Length = 1900 Score = 64.7 bits (156), Expect = 5e-09 Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 8/196 (4%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ I D+S FDG LN ++E A++ N+ Y E+ + R+ +LM + Sbjct: 1637 NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGKENNLI---RHVLLMDVYNSVHICND 1693 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 357 V+ + PSG T +N N + +R + + K F + V ++ YGDD Sbjct: 1694 SVYMMTHSQPSGNPATTPLNCFINSMGLRMCFAICVKNAGIKMTMRDFGKHVSMVSYGDD 1753 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAPTIESKPFWELDFLKRKF-L 525 N+I+ + W+N E I TD G + + P S ++ +LKRKF Sbjct: 1754 NVINFSDEVCEWYNMETIAKAFETLGFTYTDELKGVNGEVPKWRS--IKDVQYLKRKFRY 1811 Query: 526 KLDTGVIQAPLDMTAI 573 V +APL M I Sbjct: 1812 DEQRKVWEAPLCMDTI 1827 [177][TOP] >UniRef100_B3TZL4 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees RepID=B3TZL4_9VIRU Length = 1950 Score = 64.7 bits (156), Expect = 5e-09 Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 8/196 (4%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ I D+S FDG LN ++E A++ N+ Y E+ + R+ +LM + Sbjct: 1687 NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGKENNLI---RHVLLMDVYNSVHICND 1743 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP----KPEKCRFQQTVCLIVYGDD 357 V+ + PSG T +N N + +R + A K F + V ++ YGDD Sbjct: 1744 SVYMMTHSQPSGNPATTPLNCFINSMGLRMCFAICAKNAGIKMTMRDFGKHVSMVSYGDD 1803 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAPTIESKPFWELDFLKRKF-L 525 N+I+ + W+N E I TD G + + P S ++ +LKRKF Sbjct: 1804 NVINFSDEVCEWYNMETIAKAFETLGFTYTDELKGVNGEVPKWRS--IKDVQYLKRKFRY 1861 Query: 526 KLDTGVIQAPLDMTAI 573 V +APL M I Sbjct: 1862 DEQRKVWEAPLCMDTI 1877 [178][TOP] >UniRef100_B3F390 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F390_9VIRU Length = 139 Score = 64.7 bits (156), Expect = 5e-09 Identities = 34/77 (44%), Positives = 48/77 (62%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV++NS+ N + +RY YR L P E F++ V L+ YGDDN+++V+ SWF Sbjct: 59 PSGHPLTVIINSLANALYMRYCYRILNPAHECSTFKKNVNLMTYGDDNIMNVSKH-TSWF 117 Query: 397 NGEAIRVTLAEKKVKIT 447 N +I TL E + T Sbjct: 118 NHTSIANTLKEIGITYT 134 [179][TOP] >UniRef100_Q6WGT7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified picorna-like virus RepID=Q6WGT7_9PICO Length = 148 Score = 64.3 bits (155), Expect = 6e-09 Identities = 40/96 (41%), Positives = 55/96 (57%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV+VNS+ N + +RY Y L P E F++ V L+ YGDDN++ S WF Sbjct: 58 PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMG---SKQDWF 114 Query: 397 NGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELD 504 N AI LA V+ T +DK++ +S PF +D Sbjct: 115 NHTAIVAELANIGVEYT-MADKES---KSVPFIHID 146 [180][TOP] >UniRef100_Q6WGS2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified picorna-like virus RepID=Q6WGS2_9PICO Length = 148 Score = 64.3 bits (155), Expect = 6e-09 Identities = 40/96 (41%), Positives = 55/96 (57%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV+VNS+ N + +RY Y L P E F++ V L+ YGDDN++ S WF Sbjct: 58 PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMG---SKQDWF 114 Query: 397 NGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELD 504 N AI LA V+ T +DK++ +S PF +D Sbjct: 115 NHTAIVAELANIGVEYT-MADKES---KSVPFIHID 146 [181][TOP] >UniRef100_B3F391 RNA-dependent RNA polymerase (Fragment) n=2 Tax=uncultured marine RNA virus RepID=B3F391_9VIRU Length = 139 Score = 64.3 bits (155), Expect = 6e-09 Identities = 34/77 (44%), Positives = 48/77 (62%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV++NS+ N + +RY YR L P E F++ V L+ YGDDN+++V+ SWF Sbjct: 59 PSGHPLTVIINSLANALYMRYCYRILNPVHECSTFKKNVNLMTYGDDNIMNVSKH-TSWF 117 Query: 397 NGEAIRVTLAEKKVKIT 447 N +I TL E + T Sbjct: 118 NHTSIANTLKEIGITYT 134 [182][TOP] >UniRef100_Q6QLR4 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Venturia canescens picorna-like virus RepID=Q6QLR4_9PICO Length = 514 Score = 63.9 bits (154), Expect = 8e-09 Identities = 50/138 (36%), Positives = 68/138 (49%), Gaps = 11/138 (7%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK-----PEKCRFQQTVCLIVYGDD 357 VF+ CGLPSG TV NS N + IR A+ +LA + + F + V L+ GDD Sbjct: 328 VFRPTCGLPSGNCETVERNSQTNSLYIRIAFYELAKRYAPVYRDAYWFDKKVRLVTNGDD 387 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITD----GSDKDAPTIESKPFWELDFLKRKFL 525 + SV SWFN + E +K+TD G +D +IE E +LKR F+ Sbjct: 388 LIASVKEDVISWFNNRTLIEFFVEYGLKMTDALKSGVVRDYCSIE-----EASYLKRGFV 442 Query: 526 KLDT--GVIQAPLDMTAI 573 K T G APL+ +I Sbjct: 443 KHPTREGEWMAPLEEASI 460 [183][TOP] >UniRef100_Q2HWK3 Polyprotein n=1 Tax=Rhizosolenia setigera RNA virus RepID=Q2HWK3_9VIRU Length = 1605 Score = 63.9 bits (154), Expect = 8e-09 Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 15/187 (8%) Frame = +1 Query: 4 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV 183 G N + D+ A+D ++A++ A + + L+G +E + L + G V Sbjct: 1325 GKNRIVAGDFKAYDQHMSARMTLMAAKVFEYIAGLAGYTEEE-------LKIMRGASTEV 1377 Query: 184 GQKVFKVNCGL-------PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLI 342 V +N L PSG LTV NS+ N + R A+RK+ P R++ V L+ Sbjct: 1378 SYPVMSLNGELIQLYGSNPSGQNLTVYTNSIVNSLYHRCAFRKIYPN-FSGRYRDAVALM 1436 Query: 343 VYGDDNLISVAPS--------CASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWE 498 YGDD +SV+P S FN + I T+AEK+ P I+ + + Sbjct: 1437 TYGDDVKMSVSPKFPDYNHTRIQSEFNKQGIEYTMAEKEA-------ASVPFIQHE---D 1486 Query: 499 LDFLKRK 519 DFLKRK Sbjct: 1487 ADFLKRK 1493 [184][TOP] >UniRef100_Q6WGS9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified picorna-like virus RepID=Q6WGS9_9PICO Length = 148 Score = 63.5 bits (153), Expect = 1e-08 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 2/89 (2%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV+VNS+ N + +RY Y L P E F++ V L+ YGDDN++ WF Sbjct: 58 PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMGFK---QDWF 114 Query: 397 NGEAIRVTLAEKKVKIT--DGSDKDAPTI 477 N AI LA V+ T D K P+I Sbjct: 115 NHTAIVAELANIGVEYTMADKESKSVPSI 143 [185][TOP] >UniRef100_Q6WGR9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified picorna-like virus RepID=Q6WGR9_9PICO Length = 151 Score = 63.2 bits (152), Expect = 1e-08 Identities = 39/100 (39%), Positives = 57/100 (57%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 + + N PSG LTV++NS+ N + +RYAY L + + F+ V L YGDDN+ V Sbjct: 50 IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLNLQKDLLTFKHHVALFTYGDDNICGV 109 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF 492 + CA +F I+ LAE ++ T +DK+A ES PF Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEA---ESVPF 144 [186][TOP] >UniRef100_A7KCA0 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-A RepID=A7KCA0_9VIRU Length = 1689 Score = 63.2 bits (152), Expect = 1e-08 Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 4/195 (2%) Frame = +1 Query: 4 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV 183 G + DYS +D + AQ+I + + G+ V + + + Sbjct: 1420 GADRIFAGDYSKYDLRMPAQLILAAFKCLIDIAKTCGQYSVDDIKIMQGVATEIAYSCVS 1479 Query: 184 GQKVFKVNCGL-PSGFALTVVVNSVFNEILIRYAYRKLAPKPE--KCRFQQTVCLIVYGD 354 ++CG PSG LTV +N + N +L+R AY + P E F+ ++ YGD Sbjct: 1480 YNGDLIIHCGSNPSGQNLTVYINCIVNSLLLRCAYYHMYPAAEGNPEPFRHNCAVMTYGD 1539 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFL-KL 531 D SV C W+N LAE+ + T + PT + DFLKR L Sbjct: 1540 DVKGSVRQEC-DWYNHITYAQFLAERDMVFTMPDKESTPTPYMNDL-DADFLKRHNLYNP 1597 Query: 532 DTGVIQAPLDMTAIF 576 +TG+I LD +IF Sbjct: 1598 ETGLIHGVLDQNSIF 1612 [187][TOP] >UniRef100_Q7LZW0 Polyprotein n=1 Tax=Parsnip yellow fleck virus RepID=Q7LZW0_9SECO Length = 637 Score = 62.8 bits (151), Expect = 2e-08 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 12/139 (8%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQTVCLIVYGD 354 + +V G PSGF +TV+ NS N ++ A+ LA C F + V VYGD Sbjct: 491 ILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKYVRACVYGD 550 Query: 355 DNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPF---WELDFLKRKF 522 DN++++ W+N + + L + V +TDG+ A E+KP+ E DFLKR F Sbjct: 551 DNIVAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILEFDFLKRHF 608 Query: 523 L--KLDTGVIQAPLDMTAI 573 +L + APL +I Sbjct: 609 KADELIPSLFHAPLHKRSI 627 [188][TOP] >UniRef100_UPI0000164A2C RNA-dependent RNA polymerase n=1 Tax=Grapevine fanleaf virus RepID=UPI0000164A2C Length = 335 Score = 62.4 bits (150), Expect = 2e-08 Identities = 30/68 (44%), Positives = 41/68 (60%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 NCDY AFDGL+ Q++ IA+MIN Y V QR N+L+A+ GR + G +V+ Sbjct: 272 NCDYKAFDGLITEQILSTIADMINAGY----RDPVGNRQRKNLLLAICGRLSICGNQVYA 327 Query: 202 VNCGLPSG 225 G+PSG Sbjct: 328 TEAGIPSG 335 [189][TOP] >UniRef100_Q995Q1 RNA polymerase (Fragment) n=3 Tax=Kashmir bee virus RepID=Q995Q1_9VIRU Length = 182 Score = 62.0 bits (149), Expect = 3e-08 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 4/151 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ I D+S FDG LN ++E A++ N+ Y E+ + R+ +LM + Sbjct: 25 NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENALI---RHVLLMDVYNSVHICND 81 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYR----KLAPKPEKCRFQQTVCLIVYGDD 357 V+ + PSG T +N N + +R + K A K F + V L+ YGDD Sbjct: 82 SVYMMTHSQPSGNPATTPLNCFINSMGLRMCFSICATKAAVKMTMRDFSKHVSLVSYGDD 141 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITD 450 N+I+ + ++W+N I + TD Sbjct: 142 NVINFSDEVSAWYNMSTIAEAFSTLGFTYTD 172 [190][TOP] >UniRef100_B5LPA0 Polyprotein n=1 Tax=Infectious flacherie virus RepID=B5LPA0_9VIRU Length = 3085 Score = 62.0 bits (149), Expect = 3e-08 Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 5/133 (3%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 VFKVN G+ +G +T VVNSV N IL+ Y + K+A + F + +IV GDD +IS+ Sbjct: 2757 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIA-RRRASEFFKLTYIIVMGDDVVISL 2815 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKP---FWELDFLKRKFLKLDT-- 537 F+ I A+ +K+TD S+K+ T E KP F + +FL R F D Sbjct: 2816 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 2873 Query: 538 GVIQAPLDMTAIF 576 + AP+ A+F Sbjct: 2874 DITFAPVKTIALF 2886 [191][TOP] >UniRef100_B9A8E0 Non-structural polyprotein n=1 Tax=Chaetoceros socialis f. radians RNA virus RepID=B9A8E0_9VIRU Length = 1690 Score = 61.6 bits (148), Expect = 4e-08 Identities = 47/172 (27%), Positives = 84/172 (48%) Frame = +1 Query: 4 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV 183 GTN + D+ A+D ++A+++ ++ ++ L+G S+ + M + + Sbjct: 1405 GTNRIVAGDFKAYDQHMSARMVLISYYIVEQIAKLAGYSDEECKLIRGMATDVAYPMMSL 1464 Query: 184 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 363 ++ K+ PSG TV NS+ N I R + L P+ E FQ V L+ YGDDN Sbjct: 1465 NGELIKLFGSNPSGQNGTVYTNSIVNSIYQRCVFFTLYPEYEG-NFQDVVHLLTYGDDNK 1523 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRK 519 + ++P +N ++ A ++ T ++K+A ++ E DFLKRK Sbjct: 1524 MGISPDFPK-YNHTEMQKVYASVGIEYT-MAEKEAESVPLINHTEADFLKRK 1573 [192][TOP] >UniRef100_B3F386 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F386_9VIRU Length = 139 Score = 61.6 bits (148), Expect = 4e-08 Identities = 33/77 (42%), Positives = 44/77 (57%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV++NS+ N I +RY Y L P E F+ V L+ YGDDN+++V+ C W+ Sbjct: 59 PSGNPLTVILNSIVNCIRMRYVYLVLNPDKEVETFKNNVSLMTYGDDNIMTVSEEC-DWY 117 Query: 397 NGEAIRVTLAEKKVKIT 447 N AI E V T Sbjct: 118 NHTAISQAFKESGVVYT 134 [193][TOP] >UniRef100_A7LM73 Polyprotein n=1 Tax=Honey bee slow paralysis virus RepID=A7LM73_9VIRU Length = 2964 Score = 61.6 bits (148), Expect = 4e-08 Identities = 49/189 (25%), Positives = 96/189 (50%), Gaps = 11/189 (5%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYALSGESE-----VQQAQRYNMLMALVGRYAFVGQK 192 DY+ F +++Q++ + I + ++G +E ++ +Y++L+ L Sbjct: 2709 DYANFGPCVSSQIVYSCIDDIIYWHKINGATEDHCRHLELLLKYSILLPL----HLCDNC 2764 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDDN 360 V++ G+ SG +T +NS + I+ A+ R+L K F + ++VYGDD Sbjct: 2765 VYQSLNGIASGSPITAELNSEVGKKYIKLAFLGICRQLNYKYSLNDFNKHCRVVVYGDDL 2824 Query: 361 LISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFL--KLD 534 ++SV+ + SWFN ++I L +++TD + KD ++ +P + FLKR F Sbjct: 2825 ILSVSDAFVSWFNLQSISEYLDNYGIRLTDVT-KDGTIVKYRPLADSSFLKRSFKPHPSR 2883 Query: 535 TGVIQAPLD 561 +G+ AP++ Sbjct: 2884 SGIYLAPIE 2892 [194][TOP] >UniRef100_Q6WGS1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified picorna-like virus RepID=Q6WGS1_9PICO Length = 148 Score = 61.2 bits (147), Expect = 5e-08 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV+VNS+ N + +RY Y L P E F++ L+ YGDDN++ WF Sbjct: 58 PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENESLLTYGDDNVMGFK---QDWF 114 Query: 397 NGEAIRVTLAEKKVKIT--DGSDKDAPTI 477 N AI LA V+ T D K P+I Sbjct: 115 NHTAIVAELANIGVEYTMADKESKSVPSI 143 [195][TOP] >UniRef100_Q9QAG7 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus RepID=Q9QAG7_9VIRU Length = 182 Score = 60.8 bits (146), Expect = 7e-08 Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 4/151 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ I D+S FDG LN ++E A++ N+ Y E+ + R+ +LM + Sbjct: 24 NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENALI---RHVLLMDVYNSVHICND 80 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYR----KLAPKPEKCRFQQTVCLIVYGDD 357 V+ + PSG T +N N + +R + K A + F + V L+ YGDD Sbjct: 81 SVYMMTHSQPSGNPATTPLNCFINSMGLRMCFSICATKAAVRMTMRDFSKHVSLVSYGDD 140 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITD 450 N+I+ + ++W+N I + TD Sbjct: 141 NVINFSDEVSAWYNMSTIAEAFSTLGFTYTD 171 [196][TOP] >UniRef100_Q9DSG1 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus RepID=Q9DSG1_9VIRU Length = 228 Score = 60.5 bits (145), Expect = 9e-08 Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 4/151 (2%) Frame = +1 Query: 10 NEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQ 189 N+ I D+S FDG LN ++E A++ N+ Y E+ + R+ +L+ + Sbjct: 71 NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENALI---RHVLLVDVYNSVHICND 127 Query: 190 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYR----KLAPKPEKCRFQQTVCLIVYGDD 357 V+ + PSG T +N N + +R + K A K F + V L+ YGDD Sbjct: 128 SVYMMTHSQPSGNPATTPLNCFINSMGLRMCFSICATKAAVKMTMRDFSKHVSLVSYGDD 187 Query: 358 NLISVAPSCASWFNGEAIRVTLAEKKVKITD 450 N+I+ + ++W+N I + TD Sbjct: 188 NVINFSDEVSAWYNMSTIAEAFSTLGFTYTD 218 [197][TOP] >UniRef100_O70710 Polyprotein n=1 Tax=Infectious flacherie virus RepID=O70710_9VIRU Length = 3085 Score = 60.5 bits (145), Expect = 9e-08 Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 5/133 (3%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 VFKVN G+ +G +T VVNSV N IL+ Y + K+ + F + +IV GDD +IS+ Sbjct: 2757 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIT-RRRASEFFKLTYIIVMGDDVVISL 2815 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKP---FWELDFLKRKFLKLDT-- 537 F+ I A+ +K+TD S+K+ T E KP F + +FL R F D Sbjct: 2816 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 2873 Query: 538 GVIQAPLDMTAIF 576 + AP+ A+F Sbjct: 2874 DITFAPVKTIALF 2886 [198][TOP] >UniRef100_B3F385 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F385_9VIRU Length = 139 Score = 60.5 bits (145), Expect = 9e-08 Identities = 33/77 (42%), Positives = 44/77 (57%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV++N + N + RY Y L P E F+ V L+ YGDDN++ V+P A WF Sbjct: 59 PSGHPLTVIINGLANSLYNRYCYFILNPNSEVHSFKNNVNLMTYGDDNIMGVSPE-APWF 117 Query: 397 NGEAIRVTLAEKKVKIT 447 N AI L++ V T Sbjct: 118 NHTAIADALSKIGVTYT 134 [199][TOP] >UniRef100_A3RKR2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Infectious flacherie virus RepID=A3RKR2_9VIRU Length = 639 Score = 60.5 bits (145), Expect = 9e-08 Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 5/133 (3%) Frame = +1 Query: 193 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 372 VFKVN G+ +G +T VVNSV N IL+ Y + K+ + F + +IV GDD +IS+ Sbjct: 311 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIT-RRRASEFFKLTYIIVMGDDVVISL 369 Query: 373 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKP---FWELDFLKRKFLKLDT-- 537 F+ I A+ +K+TD S+K+ T E KP F + +FL R F D Sbjct: 370 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 427 Query: 538 GVIQAPLDMTAIF 576 + AP+ A+F Sbjct: 428 DITFAPVKTIALF 440 [200][TOP] >UniRef100_Q1L028 Nonstructural protein n=1 Tax=Homalodisca coagulata virus-1 RepID=Q1L028_9VIRU Length = 1795 Score = 60.1 bits (144), Expect = 1e-07 Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 4/169 (2%) Frame = +1 Query: 28 DYSAFDGLLNAQVIECIANMINKLYA-LSGESEVQQAQRYNMLMALVGRYAFVGQKVFKV 204 D+ FD L QV++ ++N L L R + + LV ++ Sbjct: 1526 DFENFDASLLTQVLDAARIVLNDLAGDLPDHQREHDDIRSVLFLDLVHSTHLARDVLYSW 1585 Query: 205 NCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQ---TVCLIVYGDDNLISVA 375 LPSG LT +VNS++ ++ RY K + + Q + L+ YGDD+++S+ Sbjct: 1586 THSLPSGHFLTAIVNSLYVNLIFRYLLAKSSKLTSHIQIDQLCRRMKLVSYGDDHIVSIP 1645 Query: 376 PSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF 522 FN + +E + TD + D E++ ++ FLKR F Sbjct: 1646 SGYEKIFNQSTLPTLFSEIGMTYTDETKSDREVPETRRIEDVTFLKRGF 1694 [201][TOP] >UniRef100_Q27YG9 RNA-directed RNA polymerase n=1 Tax=Nora virus RepID=POLR_NORAV Length = 2104 Score = 59.7 bits (143), Expect = 2e-07 Identities = 52/179 (29%), Positives = 79/179 (44%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 + DY +D L+ QV + + + + + +A+ L A + Y Q V+K Sbjct: 1842 DADYKNYDKYLHRQVFKAVRKIQRSVIQQVCPDKWDKARAVEELDA-IDTYVVDYQTVYK 1900 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPS 381 N G SG T + N + N+I YA+ K ++Q V + +GDD + SV+ Sbjct: 1901 TNRGNKSGSYTTTIDNCLANDIYGLYAWVKTTGLRSLWDYRQNVSSVAFGDDIIKSVSDE 1960 Query: 382 CASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQAPL 558 +N R L +T GS KD F L FLKR F KL+ G++ APL Sbjct: 1961 YKDKYNYCTYRDVLNATGHIMTPGS-KDGEEKPFTSFENLQFLKRGF-KLENGMVLAPL 2017 [202][TOP] >UniRef100_C1JCT1 Putative nonstructural polyprotein n=1 Tax=Solenopsis invicta virus 3 RepID=C1JCT1_9VIRU Length = 2580 Score = 58.9 bits (141), Expect = 3e-07 Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 12/182 (6%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 +CDY FD + V E +M+ + + + + Y ++ R G + Sbjct: 1918 SCDYKNFDRTIPKCVFEDFRDMLIQA------NPHMKNEIYACFQTIIDRIQVSGNSILL 1971 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK------CRFQQTVCLIVYGDDNL 363 V+ G+PSG T +NS N+I+I AY + + ++ ++ VC + YGDD + Sbjct: 1972 VHGGMPSGCVPTAPLNSKVNDIMIYTAYVNILRRADRGDITSYRYYRDLVCRLFYGDDVI 2031 Query: 364 ISVAPSCASWFNGEAIRVTLAEKK-----VKITDGSDKD-APTIESKPFWELDFLKRKFL 525 I+V S A FN + TL+E+ + +TDGS D P E+ L F+ R F Sbjct: 2032 IAVDDSIADIFNCQ----TLSEEMKILFGMNMTDGSKSDIIPKFET--IETLSFISRFFR 2085 Query: 526 KL 531 L Sbjct: 2086 PL 2087 [203][TOP] >UniRef100_B3F393 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F393_9VIRU Length = 139 Score = 58.9 bits (141), Expect = 3e-07 Identities = 29/70 (41%), Positives = 42/70 (60%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV++NS+ N + IRY+Y P E F+ V LI YGDDN + ++ + WF Sbjct: 59 PSGHPLTVIINSLVNSLYIRYSYYLTNPNQEIDTFKDNVALITYGDDNAMGISNN-VPWF 117 Query: 397 NGEAIRVTLA 426 N +I+ L+ Sbjct: 118 NHTSIQQALS 127 [204][TOP] >UniRef100_Q994U1 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994U1_9VIRU Length = 174 Score = 58.5 bits (140), Expect = 4e-07 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 4/118 (3%) Frame = +1 Query: 124 VQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 303 V + + Y +L + V +++ CG PSG +TVV+N++ N + I A+ L Sbjct: 5 VNEIEAYTLLHECLNSVHLVSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGS 64 Query: 304 PEKCR----FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 465 E+ + F+Q V L YGDD ++SV FN I LA+ + TD + D Sbjct: 65 KERGQTWESFKQNVELFCYGDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122 [205][TOP] >UniRef100_Q994T9 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994T9_9VIRU Length = 174 Score = 58.5 bits (140), Expect = 4e-07 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 4/118 (3%) Frame = +1 Query: 124 VQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 303 V + + Y +L + V +++ CG PSG +TVV+N++ N + I A+ L Sbjct: 5 VNEIEAYTLLHECLNSVHLVSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGN 64 Query: 304 PEKCR----FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 465 E+ + F+Q V L YGDD ++SV FN I LA+ + TD + D Sbjct: 65 KERGQTWESFKQNVELFCYGDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122 [206][TOP] >UniRef100_Q994T5 Polyprotein (Fragment) n=3 Tax=Sacbrood virus RepID=Q994T5_9VIRU Length = 174 Score = 58.5 bits (140), Expect = 4e-07 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 4/118 (3%) Frame = +1 Query: 124 VQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 303 V + + Y +L + V +++ CG PSG +TVV+N++ N + I A+ L Sbjct: 5 VNEIEAYTLLHECLNSVHLVSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGS 64 Query: 304 PEKCR----FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 465 E+ + F+Q V L YGDD ++SV FN I LA+ + TD + D Sbjct: 65 KERGQTWESFKQNVELFCYGDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122 [207][TOP] >UniRef100_Q994T0 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994T0_9VIRU Length = 174 Score = 58.5 bits (140), Expect = 4e-07 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 4/137 (2%) Frame = +1 Query: 124 VQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 303 V + + Y +L + V +++ CG PSG +TVV+N++ N + I A+ L Sbjct: 5 VNEIEAYTLLHECLNSVHLVSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGS 64 Query: 304 PEKCR----FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAP 471 E+ + F+Q V L YGDD ++SV FN I LA+ + TD ++K Sbjct: 65 RERGQTWESFKQNVELFCYGDDLIMSVTDKYKDTFNALTISQFLAQYGIVATD-ANKGEE 123 Query: 472 TIESKPFWELDFLKRKF 522 + FLK F Sbjct: 124 VVAYTTLLNSTFLKHGF 140 [208][TOP] >UniRef100_Q994S9 Polyprotein (Fragment) n=2 Tax=Sacbrood virus RepID=Q994S9_9VIRU Length = 174 Score = 58.5 bits (140), Expect = 4e-07 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 4/137 (2%) Frame = +1 Query: 124 VQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 303 V + + Y +L + V +++ CG PSG +TVV+N++ N + I A+ L Sbjct: 5 VNEIEAYTLLHECLNSVHLVSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGS 64 Query: 304 PEKCR----FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAP 471 E+ + F+Q V L YGDD ++SV FN I LA+ + TD ++K Sbjct: 65 RERGQTWESFKQNVELFCYGDDLIMSVTDKYKDTFNALTISQFLAQYGIVATD-ANKGEE 123 Query: 472 TIESKPFWELDFLKRKF 522 + FLK F Sbjct: 124 VVAYTTLLNSTFLKHGF 140 [209][TOP] >UniRef100_Q80MT2 RNA-dependent RNA polymerase (Fragment) n=5 Tax=Sacbrood virus RepID=Q80MT2_9VIRU Length = 186 Score = 58.5 bits (140), Expect = 4e-07 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 4/118 (3%) Frame = +1 Query: 124 VQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 303 V + + Y +L + V +++ CG PSG +TVV+N++ N + I A+ L Sbjct: 9 VNEIEAYTLLHECLNSVHLVSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGS 68 Query: 304 PEKCR----FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 465 E+ + F+Q V L YGDD ++SV FN I LA+ + TD + D Sbjct: 69 KERGQTWESFKQNVELFCYGDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 126 [210][TOP] >UniRef100_Q80G77 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle virus RepID=Q80G77_9SECO Length = 182 Score = 58.5 bits (140), Expect = 4e-07 Identities = 32/91 (35%), Positives = 53/91 (58%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N DY+ FD ++ IA+M++ L +G+ R N++ V R V + +++ Sbjct: 72 NGDYTGFDTATPRVLMMKIADMVSNL---AGDGRENAIVRRNLMKMAVERRILVLRDLYQ 128 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKL 294 V G PSGFALTV++NSV N+ + +A+RK+ Sbjct: 129 VKGGTPSGFALTVIINSVVNQFYLMWAWRKI 159 [211][TOP] >UniRef100_Q80G75 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle virus RepID=Q80G75_9SECO Length = 182 Score = 58.5 bits (140), Expect = 4e-07 Identities = 32/91 (35%), Positives = 53/91 (58%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N DY+ FD ++ IA+M++ L +G+ R N++ V R V + +++ Sbjct: 72 NGDYTGFDTATPRVLMMKIADMVSNL---AGDGRENAIVRRNLMKMAVKRRILVLRDLYQ 128 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKL 294 V G PSGFALTV++NSV N+ + +A+RK+ Sbjct: 129 VKGGTPSGFALTVIINSVVNQFYLMWAWRKI 159 [212][TOP] >UniRef100_Q994T1 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994T1_9VIRU Length = 174 Score = 57.8 bits (138), Expect = 6e-07 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 4/115 (3%) Frame = +1 Query: 124 VQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 303 V + + Y +L + V +++ CG PSG +TVV+N++ N + I A+ L Sbjct: 5 VNEIEAYTLLHECLNSVHLVSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGS 64 Query: 304 PEKCR----FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGS 456 E+ + F+Q V L YGDD ++SV FN I LA+ + TD + Sbjct: 65 KERGQTWESFKQNVELFCYGDDLIMSVTDKYKDTFNALTISQFLAQYGIVATDAN 119 [213][TOP] >UniRef100_Q80G72 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle virus RepID=Q80G72_9SECO Length = 182 Score = 57.8 bits (138), Expect = 6e-07 Identities = 31/91 (34%), Positives = 54/91 (59%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N DY+ FD ++ IA+M+++L +G+ R N++ V R V + +++ Sbjct: 72 NGDYTGFDTATPRVLMMRIADMVSEL---AGDGRENAIVRRNLMKMAVERRILVLRDLYQ 128 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKL 294 V G PSGFALTV++NSV N+ + +A+R++ Sbjct: 129 VRGGTPSGFALTVIINSVVNQFYLMWAWRRI 159 [214][TOP] >UniRef100_Q80G71 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle virus RepID=Q80G71_9SECO Length = 182 Score = 57.4 bits (137), Expect = 8e-07 Identities = 32/94 (34%), Positives = 55/94 (58%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N DY+ FD ++ IA+M+++L E+ + R N++ V R V + +++ Sbjct: 72 NGDYTGFDTATPRVLMMRIADMVSELACDGRENAIV---RRNLMRMAVERRILVLRDLYQ 128 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 303 V G PSGFALTV++NSV N+ + +A+RK+ + Sbjct: 129 VKGGTPSGFALTVIINSVVNQFYLMWAWRKITSR 162 [215][TOP] >UniRef100_Q994U2 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994U2_9VIRU Length = 174 Score = 57.0 bits (136), Expect = 1e-06 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 4/118 (3%) Frame = +1 Query: 124 VQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 303 V + + Y +L + V +++ CG PSG +TVV+N++ N + I + L Sbjct: 5 VNEIEAYTLLHECLNSVHLVSNTLYQQKCGSPSGAPITVVINTLVNILYIFVTWETLVGS 64 Query: 304 PEKCR----FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 465 E+ + F+Q V L YGDD ++SV FN I LA+ + TD + D Sbjct: 65 KERGQTWESFKQNVELFCYGDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122 [216][TOP] >UniRef100_B3F398 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F398_9VIRU Length = 137 Score = 57.0 bits (136), Expect = 1e-06 Identities = 31/77 (40%), Positives = 46/77 (59%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG +LT N + N IL RYA+ + +P+ + RF++ V L+VYGDDN V+ S WF Sbjct: 58 PSGISLTTWTNCIINSILQRYAFFR-SPRSARFRFRECVSLMVYGDDNAAGVS-SEVKWF 115 Query: 397 NGEAIRVTLAEKKVKIT 447 N I +L + ++ T Sbjct: 116 NHTTIATSLQQCGIEYT 132 [217][TOP] >UniRef100_O36184 Nonstructural polyprotein n=1 Tax=Plautia stali intestine virus RepID=O36184_9VIRU Length = 1811 Score = 56.6 bits (135), Expect = 1e-06 Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 12/194 (6%) Frame = +1 Query: 28 DYSAFDGLLNAQVI----ECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKV 195 D++++D +++ E I + L E + + R+ +L +L+ + K+ Sbjct: 1544 DFASYDSSQEKEILRAACEVIVELCEDLSLPQSERDKHRRVRWVLLESLLNSVHYSYGKL 1603 Query: 196 FKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR-----FQQTVCLIVYGDDN 360 + + LPSG LT ++NS+F I + YA+ + K + F ++ YGDD+ Sbjct: 1604 YYWSKSLPSGHFLTSIINSIFVNIAMCYAFVESQEKGNRSEENIRVFFNDFSIVTYGDDH 1663 Query: 361 LISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF---LKL 531 +I V FN + L + T I+S+ E+ F+KR F +L Sbjct: 1664 VIGVPEKYVEDFNQLTLPKLLKTLGLDYTMEDKDRICDIKSRKLEEVTFIKRSFRYVKEL 1723 Query: 532 DTGVIQAPLDMTAI 573 D + APLD+ +I Sbjct: 1724 DRWL--APLDLNSI 1735 [218][TOP] >UniRef100_Q80G73 RNA dependent RNA polymerase (Fragment) n=3 Tax=Strawberry mottle virus RepID=Q80G73_9SECO Length = 182 Score = 56.2 bits (134), Expect = 2e-06 Identities = 32/91 (35%), Positives = 53/91 (58%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N DY+ FD ++ IA+M++ L E+ + R N++ V R V + +++ Sbjct: 72 NGDYTGFDTATPRVLMMRIADMVSDLACDGRENAIV---RRNLMKMAVERRILVLRDLYQ 128 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKL 294 V G PSGFALTV++NSV N+ + +A+RK+ Sbjct: 129 VKGGTPSGFALTVIINSVVNQFYLMWAWRKI 159 [219][TOP] >UniRef100_Q80G70 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle virus RepID=Q80G70_9SECO Length = 182 Score = 56.2 bits (134), Expect = 2e-06 Identities = 32/91 (35%), Positives = 53/91 (58%) Frame = +1 Query: 22 NCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFK 201 N DY+ FD ++ IA+M++ L E+ + R N++ V R V + +++ Sbjct: 72 NGDYTGFDTATPRVLMMRIADMVSDLACDGRENAIV---RRNLMRMAVERRILVLRDLYQ 128 Query: 202 VNCGLPSGFALTVVVNSVFNEILIRYAYRKL 294 V G PSGFALTV++NSV N+ + +A+RK+ Sbjct: 129 VKGGTPSGFALTVIINSVVNQFYLMWAWRKI 159 [220][TOP] >UniRef100_B3F392 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F392_9VIRU Length = 139 Score = 55.8 bits (133), Expect = 2e-06 Identities = 30/71 (42%), Positives = 41/71 (57%) Frame = +1 Query: 217 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 396 PSG LTV++N + N + +RYAY L F+ V L+ YGDDN+++V SWF Sbjct: 59 PSGHPLTVIINGLVNSLYMRYAYTVLNEYGHCNDFKSNVNLMTYGDDNILNVNKD-ISWF 117 Query: 397 NGEAIRVTLAE 429 N +I LAE Sbjct: 118 NHTSISQALAE 128 [221][TOP] >UniRef100_Q80MT3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Sacbrood virus RepID=Q80MT3_9VIRU Length = 186 Score = 55.1 bits (131), Expect = 4e-06 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 4/118 (3%) Frame = +1 Query: 124 VQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 303 V + + +L + V +++ CG PSG +TVV+N++ N + I A+ L Sbjct: 12 VNEIEANTLLHECLNSVHLVSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGS 71 Query: 304 PEKCR----FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 465 E+ + F+Q V L YGDD ++SV FN I LA+ + TD + D Sbjct: 72 KERGQTWESFKQNVELFCYGDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 129 [222][TOP] >UniRef100_A5HB92 Non-structural protein n=1 Tax=Solenopsis invicta virus 2 RepID=A5HB92_9VIRU Length = 2153 Score = 55.1 bits (131), Expect = 4e-06 Identities = 46/190 (24%), Positives = 88/190 (46%), Gaps = 3/190 (1%) Frame = +1 Query: 16 AINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKV 195 A++ D S +DG L AQ+ + ++I + + + V ++ ++ + + Sbjct: 1889 AVDFDVSNWDGFLFAQLFYAVLDIIKAIMNVKKGTPVDYILT-SIFFDVMNCFIQFLNII 1947 Query: 196 FKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQ---QTVCLIVYGDDNLI 366 ++ + G+ SGF T VN++ + +LI Y L K F+ + V I+YGDD L+ Sbjct: 1948 YQKSRGIISGFPGTAEVNTLAHILLIVCIYLMLVAKTIWDSFEMFLRMVSAILYGDDILL 2007 Query: 367 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 546 ++ FNG+ I+ +T + K + +E+KP + FLK + +L G Sbjct: 2008 TIHDDILHLFNGKTIQREYERLGYTVTSAT-KSSEIVEAKPLSQCQFLKSSWRQLLPGYY 2066 Query: 547 QAPLDMTAIF 576 LD+ + Sbjct: 2067 IRVLDLEVAY 2076 [223][TOP] >UniRef100_Q994S8 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994S8_9VIRU Length = 174 Score = 54.7 bits (130), Expect = 5e-06 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 4/115 (3%) Frame = +1 Query: 124 VQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 303 V + + + +L + V +++ CG PSG TVV+N++ N + I A+ L Sbjct: 5 VNEIEAHTLLRECLNSVHLVSNTLYQQKCGSPSGAPTTVVINTLVNILYIFVAWETLVGS 64 Query: 304 PEKCR----FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGS 456 E+ + F+Q V L YGDD ++SV FN I LA+ + TD + Sbjct: 65 RERGQTWESFKQNVELFCYGDDLIMSVTDKYKDTFNALTISQFLAQYGIVATDAN 119 [224][TOP] >UniRef100_Q7T7T5 Polyprotein n=1 Tax=Heterosigma akashiwo RNA virus SOG263 RepID=Q7T7T5_HARNA Length = 2581 Score = 53.9 bits (128), Expect = 9e-06 Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 1/171 (0%) Frame = +1 Query: 7 TNEAINCDYSAFDGLLNAQVIECIANMINKLYALSG-ESEVQQAQRYNMLMALVGRYAFV 183 T I DYS+FD NA + C ++ L S S+V + ++ +L + Sbjct: 1431 TETVIAGDYSSFDMSHNADAVRCAMQVLLDLIDESSLYSDVDKLAARTLVESLGQSFLAF 1490 Query: 184 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 363 +V + SG LT ++S N+I +R ++ + +P F+ V LIVYGDDN Sbjct: 1491 DGTWMQVIGWVMSGVPLTAELSSTLNQIYMRVVWKVVTQRPIS-DFRSHVALIVYGDDNN 1549 Query: 364 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKR 516 +V +N +++ VT+ + ++ T+ D I + + +FLKR Sbjct: 1550 AAVRDE--PRYNFQSVAVTMGKFRMTYTNTDKNDEMHIYQR-LEDAEFLKR 1597