BB910827 ( RCE09849 )

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[1][TOP]
>UniRef100_C6TAR7 Pseudouridylate synthase n=1 Tax=Glycine max RepID=C6TAR7_SOYBN
          Length = 370

 Score =  134 bits (336), Expect = 6e-30
 Identities = 64/71 (90%), Positives = 69/71 (97%)
 Frame = -1

Query: 565 HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLY 386
           HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLT+PDVERILNA+ V AASPMAPACGLY
Sbjct: 300 HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPDVERILNARTVTAASPMAPACGLY 359

Query: 385 LGKVKYDLPSS 353
           LG+VKYDLP++
Sbjct: 360 LGEVKYDLPTT 370

[2][TOP]
>UniRef100_Q1SKV8 Pseudouridylate synthase n=1 Tax=Medicago truncatula
           RepID=Q1SKV8_MEDTR
          Length = 361

 Score =  129 bits (325), Expect = 1e-28
 Identities = 63/71 (88%), Positives = 66/71 (92%)
 Frame = -1

Query: 568 FHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGL 389
           +HRCLVVTARARAFLYHQVRLLVGVLK VGTGN+TV DVERILNAK V A SPMAPACGL
Sbjct: 291 YHRCLVVTARARAFLYHQVRLLVGVLKDVGTGNITVTDVERILNAKTVTATSPMAPACGL 350

Query: 388 YLGKVKYDLPS 356
           YLG+VKYDLPS
Sbjct: 351 YLGEVKYDLPS 361

[3][TOP]
>UniRef100_A7QCG7 Pseudouridylate synthase n=1 Tax=Vitis vinifera RepID=A7QCG7_VITVI
          Length = 380

 Score =  121 bits (303), Expect = 4e-26
 Identities = 58/69 (84%), Positives = 62/69 (89%)
 Frame = -1

Query: 565 HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLY 386
           HRC +VTARAR+FLYHQVRLLVGV+K VGTG+LTV DVERILNAK V AASPMAPACGLY
Sbjct: 312 HRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERILNAKTVTAASPMAPACGLY 371

Query: 385 LGKVKYDLP 359
           LG V YDLP
Sbjct: 372 LGNVNYDLP 380

[4][TOP]
>UniRef100_B9N771 Pseudouridylate synthase n=1 Tax=Populus trichocarpa
           RepID=B9N771_POPTR
          Length = 326

 Score =  116 bits (290), Expect = 1e-24
 Identities = 54/67 (80%), Positives = 63/67 (94%)
 Frame = -1

Query: 565 HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLY 386
           HRC V+TAR+R+FLYHQVRLLVGVLK+VGTG+LTV DVERILNA+++ AASPMAPACGLY
Sbjct: 258 HRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERILNARSITAASPMAPACGLY 317

Query: 385 LGKVKYD 365
           LG VKY+
Sbjct: 318 LGHVKYE 324

[5][TOP]
>UniRef100_B9SKD4 Pseudouridylate synthase n=1 Tax=Ricinus communis
           RepID=B9SKD4_RICCO
          Length = 372

 Score =  115 bits (287), Expect = 3e-24
 Identities = 57/69 (82%), Positives = 62/69 (89%)
 Frame = -1

Query: 565 HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLY 386
           HRC VVTARAR+FLYHQVRLLVGVLK+VG G+LT  DVERIL+AK+V AASPMAPA GLY
Sbjct: 304 HRCFVVTARARSFLYHQVRLLVGVLKSVGIGDLTTSDVERILSAKSVTAASPMAPARGLY 363

Query: 385 LGKVKYDLP 359
           LG VKYDLP
Sbjct: 364 LGHVKYDLP 372

[6][TOP]
>UniRef100_Q2QWH9 Pseudouridylate synthase n=1 Tax=Oryza sativa Japonica Group
           RepID=Q2QWH9_ORYSJ
          Length = 391

 Score =  112 bits (280), Expect = 2e-23
 Identities = 54/68 (79%), Positives = 59/68 (86%)
 Frame = -1

Query: 565 HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLY 386
           HRC VVTARAR+FLYHQVRL+VG+LK+VGTG+LT  DVERILN K V AA PMAPACGLY
Sbjct: 322 HRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTEDVERILNLKAVTAAPPMAPACGLY 381

Query: 385 LGKVKYDL 362
           L  VKYDL
Sbjct: 382 LANVKYDL 389

[7][TOP]
>UniRef100_B8BNJ9 Pseudouridylate synthase n=1 Tax=Oryza sativa Indica Group
           RepID=B8BNJ9_ORYSI
          Length = 391

 Score =  112 bits (280), Expect = 2e-23
 Identities = 54/68 (79%), Positives = 59/68 (86%)
 Frame = -1

Query: 565 HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLY 386
           HRC VVTARAR+FLYHQVRL+VG+LK+VGTG+LT  DVERILN K V AA PMAPACGLY
Sbjct: 322 HRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTEDVERILNLKAVTAAPPMAPACGLY 381

Query: 385 LGKVKYDL 362
           L  VKYDL
Sbjct: 382 LANVKYDL 389

[8][TOP]
>UniRef100_C0HIQ3 Pseudouridylate synthase n=1 Tax=Zea mays RepID=C0HIQ3_MAIZE
          Length = 222

 Score =  108 bits (271), Expect = 2e-22
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = -1

Query: 565 HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLY 386
           HRC VVTARAR+FLYHQVRL+VG+LK+VGTG+LT  DVERIL+AK V AA  MAP+CGLY
Sbjct: 153 HRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTADVERILDAKTVTAAPSMAPSCGLY 212

Query: 385 LGKVKYDL 362
           L  VKYDL
Sbjct: 213 LANVKYDL 220

[9][TOP]
>UniRef100_B6SIS1 Pseudouridylate synthase n=1 Tax=Zea mays RepID=B6SIS1_MAIZE
          Length = 386

 Score =  108 bits (271), Expect = 2e-22
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = -1

Query: 565 HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLY 386
           HRC VVTARAR+FLYHQVRL+VG+LK+VGTG+LT  DVERIL+AK V AA  MAP+CGLY
Sbjct: 317 HRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTADVERILDAKTVTAAPSMAPSCGLY 376

Query: 385 LGKVKYDL 362
           L  VKYDL
Sbjct: 377 LANVKYDL 384

[10][TOP]
>UniRef100_UPI000034F4DB tRNA pseudouridine synthase family protein n=1 Tax=Arabidopsis
           thaliana RepID=UPI000034F4DB
          Length = 372

 Score =  107 bits (267), Expect = 6e-22
 Identities = 51/69 (73%), Positives = 57/69 (82%)
 Frame = -1

Query: 565 HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLY 386
           HRC VVTAR+R FLYHQVRL+VG LK VGTG LTV DVERIL AK V+AA PMAPA GLY
Sbjct: 304 HRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAKTVSAAKPMAPASGLY 363

Query: 385 LGKVKYDLP 359
           L +V+Y+ P
Sbjct: 364 LARVRYEFP 372

[11][TOP]
>UniRef100_Q6NKP7 Pseudouridylate synthase n=2 Tax=Arabidopsis thaliana
           RepID=Q6NKP7_ARATH
          Length = 372

 Score =  107 bits (267), Expect = 6e-22
 Identities = 51/69 (73%), Positives = 57/69 (82%)
 Frame = -1

Query: 565 HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLY 386
           HRC VVTAR+R FLYHQVRL+VG LK VGTG LTV DVERIL AK V+AA PMAPA GLY
Sbjct: 304 HRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAKTVSAAKPMAPASGLY 363

Query: 385 LGKVKYDLP 359
           L +V+Y+ P
Sbjct: 364 LARVRYEFP 372

[12][TOP]
>UniRef100_C5YTE9 Pseudouridylate synthase n=1 Tax=Sorghum bicolor RepID=C5YTE9_SORBI
          Length = 387

 Score =  105 bits (262), Expect = 2e-21
 Identities = 52/68 (76%), Positives = 58/68 (85%)
 Frame = -1

Query: 565 HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLY 386
           HRC VVTARAR+FLYHQVRL+VG+LK+VGTG+LT  DVERIL+AK V AA  MAPA GLY
Sbjct: 318 HRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTADVERILDAKTVTAAPRMAPAYGLY 377

Query: 385 LGKVKYDL 362
           L  VKYDL
Sbjct: 378 LANVKYDL 385

[13][TOP]
>UniRef100_A9SK13 Pseudouridylate synthase n=1 Tax=Physcomitrella patens subsp.
           patens RepID=A9SK13_PHYPA
          Length = 331

 Score =  100 bits (249), Expect = 8e-20
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = -1

Query: 562 RCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYL 383
           RC V+TARAR+FLYHQVRL+VG LKAVG G+LTV DV+RIL+A+ +  A  MAPACGLYL
Sbjct: 250 RCFVITARARSFLYHQVRLMVGTLKAVGCGDLTVQDVQRILDARTITQAPAMAPACGLYL 309

Query: 382 GKVKYD 365
             VKYD
Sbjct: 310 ANVKYD 315

[14][TOP]
>UniRef100_A4S4E5 Pseudouridylate synthase n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4S4E5_OSTLU
          Length = 308

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 37/61 (60%), Positives = 43/61 (70%)
 Frame = -1

Query: 550 VTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVK 371
           +   A +FLYHQVRLL G LKAVG  +LTV DV+ +L AK+VA A  MAPA GLYL  V 
Sbjct: 231 IAVAAPSFLYHQVRLLAGALKAVGANDLTVKDVQELLEAKDVARAPQMAPAHGLYLADVA 290

Query: 370 Y 368
           Y
Sbjct: 291 Y 291

[15][TOP]
>UniRef100_Q00Z96 Pseudouridylate synthase n=1 Tax=Ostreococcus tauri
           RepID=Q00Z96_OSTTA
          Length = 338

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 38/61 (62%), Positives = 44/61 (72%)
 Frame = -1

Query: 550 VTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVK 371
           V   A +FLYHQVRLLVG LK+VG G+LTV DV  +L AK+V+ A  MAPA GLYL  V 
Sbjct: 251 VRVEAPSFLYHQVRLLVGALKSVGAGDLTVDDVRELLEAKDVSQAPQMAPAHGLYLMDVG 310

Query: 370 Y 368
           Y
Sbjct: 311 Y 311

[16][TOP]
>UniRef100_C1N0D6 Pseudouridylate synthase n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N0D6_9CHLO
          Length = 390

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAA-ASPMAPACGLYLG 380
           +V+TARA +FLYHQVRL+VG L+AVG G L+  DV  +L     A+ A PMAPA GLYL 
Sbjct: 286 IVITARAPSFLYHQVRLMVGTLRAVGAGELSPDDVTDLLEGTTDASRAPPMAPAHGLYLE 345

Query: 379 KVKYD 365
           +V YD
Sbjct: 346 RVHYD 350

[17][TOP]
>UniRef100_B6IPI0 tRNA pseudouridine synthase A n=1 Tax=Rhodospirillum centenum SW
           RepID=TRUA_RHOCS
          Length = 245

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 34/61 (55%), Positives = 41/61 (67%)
 Frame = -1

Query: 550 VTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVK 371
           + ARAR+FL+HQVR +VG LK VG G  T  DV R L A+N +AA P APA GLY  +  
Sbjct: 185 IVARARSFLHHQVRNMVGTLKLVGEGRWTADDVSRALAARNRSAAGPTAPAAGLYFTEAW 244

Query: 370 Y 368
           Y
Sbjct: 245 Y 245

[18][TOP]
>UniRef100_C1FJS9 Pseudouridylate synthase n=1 Tax=Micromonas sp. RCC299
           RepID=C1FJS9_9CHLO
          Length = 452

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 34/64 (53%), Positives = 42/64 (65%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           +VVTA   +FLYHQVRL+V  L+AVG G +    V  +L A+   A   MAPA GLYLG+
Sbjct: 371 VVVTAVGPSFLYHQVRLMVATLRAVGAGEIDPASVPALLAARTPRAVPAMAPAHGLYLGR 430

Query: 376 VKYD 365
           V YD
Sbjct: 431 VHYD 434

[19][TOP]
>UniRef100_C7JEJ1 tRNA pseudouridine synthase A TruA n=8 Tax=Acetobacter pasteurianus
           RepID=C7JEJ1_ACEP3
          Length = 262

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 33/64 (51%), Positives = 40/64 (62%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           ++V A+AR+FL+HQVR +VG LK VG G      V   L A+N  AA P AP  GLYL  
Sbjct: 194 VIVFAKARSFLHHQVRNMVGTLKLVGIGAWQPERVAEALEARNRCAAGPTAPPEGLYLNG 253

Query: 376 VKYD 365
           V YD
Sbjct: 254 VGYD 257

[20][TOP]
>UniRef100_A7HPQ3 tRNA pseudouridine synthase A n=1 Tax=Parvibaculum lavamentivorans
           DS-1 RepID=TRUA_PARL1
          Length = 246

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 32/62 (51%), Positives = 42/62 (67%)
 Frame = -1

Query: 550 VTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVK 371
           +  RAR+FL++QVR  VG LK VG G+ T   VE+ L AK+ AA  P+AP  GLYL +V 
Sbjct: 185 IVCRARSFLHNQVRSFVGTLKMVGDGSWTRRKVEKALAAKDRAACGPVAPPDGLYLLQVD 244

Query: 370 YD 365
           Y+
Sbjct: 245 YE 246

[21][TOP]
>UniRef100_A9HB17 Pseudouridylate synthase n=1 Tax=Roseobacter litoralis Och 149
           RepID=A9HB17_9RHOB
          Length = 256

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 31/61 (50%), Positives = 39/61 (63%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYDL 362
           RAR+FL++QVR  VG L+ VG G+ T  DV R L  ++ AA  P+ P  GLYL  V YD 
Sbjct: 192 RARSFLHNQVRSFVGTLERVGAGSSTPQDVARALALRDRAACGPVCPPYGLYLAHVVYDR 251

Query: 361 P 359
           P
Sbjct: 252 P 252

[22][TOP]
>UniRef100_Q11LD0 tRNA pseudouridine synthase A n=1 Tax=Chelativorans sp. BNC1
           RepID=TRUA_MESSB
          Length = 247

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 31/61 (50%), Positives = 40/61 (65%)
 Frame = -1

Query: 550 VTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVK 371
           + A AR+FL++QVR LVG LK VG G  T  D +  L A++ AA  P+AP  GLYL +V 
Sbjct: 187 IHASARSFLHNQVRSLVGTLKKVGEGGWTADDAQAALQARDRAACGPVAPPQGLYLVRVD 246

Query: 370 Y 368
           Y
Sbjct: 247 Y 247

[23][TOP]
>UniRef100_A8TUC9 Pseudouridylate synthase n=1 Tax=alpha proteobacterium BAL199
           RepID=A8TUC9_9PROT
          Length = 248

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 33/63 (52%), Positives = 40/63 (63%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           +VV ARAR+FL+HQVR +VG L+ VG G     DV   L A++  AA P APA GL L  
Sbjct: 184 IVVEARARSFLHHQVRNMVGTLRLVGEGKWQPDDVTAALKARDRVAAGPTAPADGLTLTA 243

Query: 376 VKY 368
           V Y
Sbjct: 244 VGY 246

[24][TOP]
>UniRef100_Q1GE00 tRNA pseudouridine synthase A n=1 Tax=Ruegeria sp. TM1040
           RepID=TRUA_SILST
          Length = 259

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 31/61 (50%), Positives = 40/61 (65%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYDL 362
           RAR+FL++QVR  VG L+ VGTG  +  DV+  L AK+ AA  P+ P  GLYL +V Y  
Sbjct: 192 RARSFLHNQVRSFVGTLERVGTGAWSPEDVKHALEAKDRAACGPVCPGHGLYLARVGYPD 251

Query: 361 P 359
           P
Sbjct: 252 P 252

[25][TOP]
>UniRef100_Q168C1 tRNA pseudouridine synthase A n=1 Tax=Roseobacter denitrificans OCh
           114 RepID=TRUA_ROSDO
          Length = 260

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 31/61 (50%), Positives = 39/61 (63%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYDL 362
           RAR+FL++QVR  VG L+ VG G+ T  DV R L  ++ AA  P+ P  GLYL  V YD 
Sbjct: 192 RARSFLHNQVRSFVGTLERVGAGSSTPQDVARALALRDRAACGPVCPPHGLYLAHVVYDR 251

Query: 361 P 359
           P
Sbjct: 252 P 252

[26][TOP]
>UniRef100_Q2GF33 tRNA pseudouridine synthase A n=1 Tax=Neorickettsia sennetsu str.
           Miyayama RepID=TRUA_NEOSM
          Length = 243

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/63 (49%), Positives = 41/63 (65%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           ++  A A++FL+HQVR++VG L A+ +G L    V  IL+ KN   A P AP CGLYL K
Sbjct: 183 MIFHASAKSFLHHQVRIMVGTLVAIASGKLM--SVTEILSKKNRRYAGPTAPPCGLYLLK 240

Query: 376 VKY 368
           V Y
Sbjct: 241 VDY 243

[27][TOP]
>UniRef100_C2KI30 Pseudouridylate synthase n=1 Tax=Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254 RepID=C2KI30_LEUMC
          Length = 255

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 28/64 (43%), Positives = 41/64 (64%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           +V T    AFLY+Q+R++VGVL  +GTG   V D+ R++  K+   A   APA GLYL +
Sbjct: 192 IVFTFEGNAFLYNQIRIMVGVLLEIGTGKRPVHDIVRLIEVKDREQARYTAPASGLYLDE 251

Query: 376 VKYD 365
           + Y+
Sbjct: 252 IDYN 255

[28][TOP]
>UniRef100_A8S1C6 Pseudouridylate synthase n=1 Tax=Clostridium bolteae ATCC BAA-613
           RepID=A8S1C6_9CLOT
          Length = 247

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 29/65 (44%), Positives = 41/65 (63%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           + +      FLY+ VR++ G L AVGTG++   D+  IL AK+  AA P APA GL L +
Sbjct: 183 ITIRVTGNGFLYNMVRIIAGTLMAVGTGHIQAEDMPSILEAKDRRAAGPTAPARGLTLIE 242

Query: 376 VKYDL 362
           +KY+L
Sbjct: 243 MKYEL 247

[29][TOP]
>UniRef100_Q03ZL3 tRNA pseudouridine synthase A n=1 Tax=Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293 RepID=TRUA_LEUMM
          Length = 255

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 28/64 (43%), Positives = 41/64 (64%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           +V T    AFLY+Q+R++VGVL  +GTG   V D+ R++  K+   A   APA GLYL +
Sbjct: 192 IVFTFEGNAFLYNQIRIMVGVLLEIGTGKRPVHDIVRLIEVKDREQARYTAPASGLYLDE 251

Query: 376 VKYD 365
           + Y+
Sbjct: 252 IDYN 255

[30][TOP]
>UniRef100_B4W657 Pseudouridylate synthase n=1 Tax=Brevundimonas sp. BAL3
           RepID=B4W657_9CAUL
          Length = 247

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYD 365
           +AR+FL+ QVR + G L  VG G  T  DV+  L AK+ A   P+AP+ GLYL  V+YD
Sbjct: 189 QARSFLHRQVRSMAGTLVEVGLGRWTAHDVKAALEAKDRARCGPVAPSAGLYLSGVRYD 247

[31][TOP]
>UniRef100_A7IKI9 tRNA pseudouridine synthase A n=1 Tax=Xanthobacter autotrophicus
           Py2 RepID=TRUA_XANP2
          Length = 245

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 30/61 (49%), Positives = 36/61 (59%)
 Frame = -1

Query: 550 VTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVK 371
           V   AR+FL+HQVR +VG L  VG G  +  D+E  L A +     PMAPA GLYL  V 
Sbjct: 185 VITSARSFLHHQVRSMVGSLMRVGEGRWSADDLEAALKAADRTRCGPMAPAAGLYLAAVS 244

Query: 370 Y 368
           Y
Sbjct: 245 Y 245

[32][TOP]
>UniRef100_A8IQL3 tRNA pseudouridine synthase A n=1 Tax=Azorhizobium caulinodans ORS
           571 RepID=TRUA_AZOC5
          Length = 258

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 29/61 (47%), Positives = 37/61 (60%)
 Frame = -1

Query: 550 VTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVK 371
           +   AR+FL+HQVR +VG L  VG G  +  D+   L A++     PMAPACGLYL  V 
Sbjct: 185 IVTSARSFLHHQVRSMVGSLIRVGEGRWSADDLADALAARDRRRCGPMAPACGLYLAAVS 244

Query: 370 Y 368
           Y
Sbjct: 245 Y 245

[33][TOP]
>UniRef100_C6V3Q0 Pseudouridylate synthase n=1 Tax=Neorickettsia risticii str.
           Illinois RepID=C6V3Q0_NEORI
          Length = 243

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 29/63 (46%), Positives = 41/63 (65%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           ++  A A++FL+HQVR++VG L A+ +G L       IL+ +N   A P AP+CGLYL K
Sbjct: 183 IIFHASAKSFLHHQVRIMVGTLVAIASGKLV--SATEILSKRNRCYAGPTAPSCGLYLLK 240

Query: 376 VKY 368
           V Y
Sbjct: 241 VDY 243

[34][TOP]
>UniRef100_A3SLU7 Pseudouridylate synthase n=1 Tax=Roseovarius nubinhibens ISM
           RepID=A3SLU7_9RHOB
          Length = 258

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 29/58 (50%), Positives = 40/58 (68%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR  VG L+ VG G  +  DV+  L+A+N AA  P++P  GLYL  V+Y
Sbjct: 192 RARSFLHNQVRSFVGTLERVGAGRWSPDDVKAALDARNRAACGPVSPPHGLYLAGVEY 249

[35][TOP]
>UniRef100_C6QBF0 Pseudouridylate synthase n=1 Tax=Hyphomicrobium denitrificans ATCC
           51888 RepID=C6QBF0_9RHIZ
          Length = 246

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           +V    AR+FL+HQVR +VG LK VG G  +  D+   L A N  A  P+APA GLYL  
Sbjct: 183 IVCRVSARSFLHHQVRSMVGSLKLVGEGKWSRADLASALAAANREACGPVAPAAGLYLVG 242

Query: 376 VKYD 365
           V Y+
Sbjct: 243 VDYE 246

[36][TOP]
>UniRef100_A6C4N8 Pseudouridylate synthase n=1 Tax=Planctomyces maris DSM 8797
           RepID=A6C4N8_9PLAN
          Length = 267

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 30/63 (47%), Positives = 38/63 (60%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           + V   A  FLY+ VR +VG L  VG G  T  DV++IL   + + A P APACGLYL +
Sbjct: 203 ITVDVVADGFLYNMVRAIVGTLLDVGVGRWTSNDVQKILTGMDRSQAGPTAPACGLYLVQ 262

Query: 376 VKY 368
           V Y
Sbjct: 263 VDY 265

[37][TOP]
>UniRef100_A3SF68 Pseudouridylate synthase n=2 Tax=Sulfitobacter RepID=A3SF68_9RHOB
          Length = 262

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 28/59 (47%), Positives = 41/59 (69%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYD 365
           RAR+FL++QVR +VG L+ VG G+    DV+++L A++  A  P+AP  GLYL  V Y+
Sbjct: 192 RARSFLHNQVRSIVGTLERVGAGSFAPDDVKQMLAARDRQACGPVAPPQGLYLSHVTYE 250

[38][TOP]
>UniRef100_A5FVK4 tRNA pseudouridine synthase A n=1 Tax=Acidiphilium cryptum JF-5
           RepID=TRUA_ACICJ
          Length = 255

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 31/65 (47%), Positives = 42/65 (64%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           +V+ A AR+FL+HQVR +VG LK VG G   V  V   L A++ +AA P AP  GL L  
Sbjct: 185 VVIEAEARSFLHHQVRNMVGTLKLVGEGRWRVGRVAEALAARDRSAAGPTAPPDGLVLVA 244

Query: 376 VKYDL 362
           V+Y++
Sbjct: 245 VRYEV 249

[39][TOP]
>UniRef100_D0DT05 tRNA pseudouridine synthase A n=1 Tax=Lactobacillus fermentum
           28-3-CHN RepID=D0DT05_LACFE
          Length = 258

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = -1

Query: 529 FLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYDLPSS 353
           FLY+QVR++V  L  +G G   V DV R++ AKN   A   APA GLYL +V YD P++
Sbjct: 196 FLYNQVRIMVAFLLEIGNGRRPVDDVMRVMKAKNRDLARGTAPASGLYLVEVTYDSPAN 254

[40][TOP]
>UniRef100_C9CZP8 tRNA pseudouridine synthase A n=1 Tax=Silicibacter sp. TrichCH4B
           RepID=C9CZP8_9RHOB
          Length = 278

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 31/61 (50%), Positives = 38/61 (62%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYDL 362
           RAR+FL++QVR  VG L+ VG G  T  DV   L AK+ AA  P+ P  GLYL +V Y  
Sbjct: 211 RARSFLHNQVRSFVGTLERVGAGAWTPEDVRDALAAKDRAACGPVCPGHGLYLARVGYPD 270

Query: 361 P 359
           P
Sbjct: 271 P 271

[41][TOP]
>UniRef100_C0WZT7 Pseudouridylate synthase n=1 Tax=Lactobacillus fermentum ATCC 14931
           RepID=C0WZT7_LACFE
          Length = 258

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = -1

Query: 529 FLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYDLPSS 353
           FLY+QVR++V  L  +G G   V DV R++ AKN   A   APA GLYL +V YD P++
Sbjct: 196 FLYNQVRIMVAFLLEIGNGRRPVDDVMRVMKAKNRDLARGTAPASGLYLVEVTYDSPAN 254

[42][TOP]
>UniRef100_Q2WAT0 tRNA pseudouridine synthase A n=1 Tax=Magnetospirillum magneticum
           AMB-1 RepID=TRUA_MAGSA
          Length = 256

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 28/61 (45%), Positives = 38/61 (62%)
 Frame = -1

Query: 550 VTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVK 371
           + A AR+FL+HQVR +VG LK VG G  +  D+ ++L A++     P APA GL L  V 
Sbjct: 185 IVAEARSFLHHQVRNMVGTLKLVGEGKWSPDDMAKVLEARDRTKGGPTAPAAGLVLTGVS 244

Query: 370 Y 368
           Y
Sbjct: 245 Y 245

[43][TOP]
>UniRef100_B2GDT8 tRNA pseudouridine synthase A n=1 Tax=Lactobacillus fermentum IFO
           3956 RepID=TRUA_LACF3
          Length = 258

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = -1

Query: 529 FLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYDLPSS 353
           FLY+QVR++V  L  +G G   V DV R++ AKN   A   APA GLYL +V YD P++
Sbjct: 196 FLYNQVRIMVAFLLEIGNGRRPVDDVMRVMKAKNRDLARGTAPASGLYLVEVTYDSPAN 254

[44][TOP]
>UniRef100_A1UUB6 tRNA pseudouridine synthase A n=1 Tax=Bartonella bacilliformis
           KC583 RepID=TRUA_BARBK
          Length = 247

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 29/59 (49%), Positives = 37/59 (62%)
 Frame = -1

Query: 544 ARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           ARAR+FL+HQ+R   G L  VG G  T  D+E  L+AK+ A    +AP  GLYL +V Y
Sbjct: 189 ARARSFLHHQIRSFAGSLMEVGIGRWTAQDLEEALHAKDRARCGMVAPPSGLYLTQVDY 247

[45][TOP]
>UniRef100_Q0G0U5 Pseudouridylate synthase n=1 Tax=Fulvimarina pelagi HTCC2506
           RepID=Q0G0U5_9RHIZ
          Length = 261

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 27/61 (44%), Positives = 37/61 (60%)
 Frame = -1

Query: 550 VTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVK 371
           + A A++FL++Q+R   G LK VG G  T  DV   L AK+  A  P+AP  GLYL  ++
Sbjct: 186 IVAMAQSFLHNQIRSFAGTLKLVGEGRWTATDVSEALKAKDRTACGPVAPPYGLYLTAIE 245

Query: 370 Y 368
           Y
Sbjct: 246 Y 246

[46][TOP]
>UniRef100_A9ILJ7 tRNA pseudouridine synthase A n=1 Tax=Bartonella tribocorum CIP
           105476 RepID=TRUA_BART1
          Length = 247

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 28/63 (44%), Positives = 39/63 (61%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           + + A+AR+FL+HQ+R   G L  VG G  T  D+E  L+AK+      +AP  GLYL K
Sbjct: 185 IFIYAKARSFLHHQIRSFAGSLMEVGIGRWTAQDLEAALHAKDRKRCGVVAPPSGLYLTK 244

Query: 376 VKY 368
           V+Y
Sbjct: 245 VEY 247

[47][TOP]
>UniRef100_A9EAT3 Pseudouridylate synthase n=1 Tax=Oceanibulbus indolifex HEL-45
           RepID=A9EAT3_9RHOB
          Length = 257

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR  VG L+ VG G+ +V D+   L AK+ AA  P+ P  GLYL  V Y
Sbjct: 192 RARSFLHNQVRSFVGTLERVGAGSWSVADMGAALAAKDRAACGPVCPPHGLYLAHVSY 249

[48][TOP]
>UniRef100_UPI0001BB4A23 tRNA pseudouridine synthase A n=1 Tax=alpha proteobacterium HIMB114
           RepID=UPI0001BB4A23
          Length = 245

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 26/63 (41%), Positives = 40/63 (63%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           ++   ++R+FL HQVR +VG +K VG    ++ D++  L +KN    +  APACGLYL  
Sbjct: 183 IIYIVKSRSFLQHQVRSMVGAIKFVGEKKWSLKDLDEALKSKNRNNCATPAPACGLYLEN 242

Query: 376 VKY 368
           V+Y
Sbjct: 243 VEY 245

[49][TOP]
>UniRef100_B9NQ81 Pseudouridylate synthase n=1 Tax=Rhodobacteraceae bacterium KLH11
           RepID=B9NQ81_9RHOB
          Length = 255

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 30/61 (49%), Positives = 37/61 (60%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYDL 362
           RAR+FL++QVR  VG L+ VG G  T  DV   L A + AA  P+ P  GLYL +V Y  
Sbjct: 192 RARSFLHNQVRSFVGTLERVGAGAWTPEDVRDALEAADRAACGPVCPPQGLYLARVGYPE 251

Query: 361 P 359
           P
Sbjct: 252 P 252

[50][TOP]
>UniRef100_B7RLD9 Pseudouridylate synthase n=1 Tax=Roseobacter sp. GAI101
           RepID=B7RLD9_9RHOB
          Length = 256

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 40/58 (68%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR  VG L+ VG G+LT  DV+ + +A++  A  P++P  GLYL  V Y
Sbjct: 192 RARSFLHNQVRSFVGTLERVGAGSLTPDDVKVMRDARDRQACGPVSPPHGLYLAHVDY 249

[51][TOP]
>UniRef100_B6B0L0 Pseudouridylate synthase n=1 Tax=Rhodobacterales bacterium HTCC2083
           RepID=B6B0L0_9RHOB
          Length = 259

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = -1

Query: 547 TARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           T RAR+FL++QVR  VG L +VG+G  T  DV+  L A++  A  P++P  GLYL  V Y
Sbjct: 190 TVRARSFLHNQVRSFVGTLGSVGSGAWTPDDVKSALQAQDRQACGPVSPPHGLYLAHVTY 249

[52][TOP]
>UniRef100_B5K9Z5 Pseudouridylate synthase n=1 Tax=Octadecabacter antarcticus 238
           RepID=B5K9Z5_9RHOB
          Length = 256

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 29/58 (50%), Positives = 36/58 (62%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR  VG L+ VG G  T  DV   LNA++  A  P+ P  GLYL  V Y
Sbjct: 193 RARSFLHNQVRSFVGTLERVGAGAWTPDDVTAALNARDRTACGPVCPPHGLYLAGVSY 250

[53][TOP]
>UniRef100_B5JAK6 Pseudouridylate synthase n=1 Tax=Octadecabacter antarcticus 307
           RepID=B5JAK6_9RHOB
          Length = 256

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 29/58 (50%), Positives = 36/58 (62%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR  VG L+ VG G  T  DV   LNA++  A  P+ P  GLYL  V Y
Sbjct: 193 RARSFLHNQVRSFVGTLERVGAGAWTRDDVSAALNARDRTACGPVCPPHGLYLASVGY 250

[54][TOP]
>UniRef100_Q04G54 tRNA pseudouridine synthase A n=1 Tax=Oenococcus oeni PSU-1
           RepID=TRUA_OENOB
          Length = 252

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 28/64 (43%), Positives = 40/64 (62%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           L+ T    AFLY+Q+R++VGVL  +G G   V D+ R++  K+   A   APA GLYL +
Sbjct: 186 LLFTFEGNAFLYNQIRIMVGVLLEIGNGTRPVHDIIRLIKIKDRQQARFTAPASGLYLDE 245

Query: 376 VKYD 365
           V Y+
Sbjct: 246 VYYE 249

[55][TOP]
>UniRef100_Q6G547 tRNA pseudouridine synthase A n=1 Tax=Bartonella henselae
           RepID=TRUA_BARHE
          Length = 247

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 28/59 (47%), Positives = 37/59 (62%)
 Frame = -1

Query: 544 ARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           A+AR+FL+HQ+R   G L  VG G  T  D+E  L+AK+      +AP  GLYL KV+Y
Sbjct: 189 AQARSFLHHQIRSFAGSLMEVGIGRWTTQDLEAALHAKDRTRCGMVAPPSGLYLTKVEY 247

[56][TOP]
>UniRef100_A9HKQ8 Pseudouridylate synthase n=1 Tax=Gluconacetobacter diazotrophicus
           PAl 5 RepID=A9HKQ8_GLUDA
          Length = 258

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 35/65 (53%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPD-VERILNAKNVAAASPMAPACGLYLG 380
           +V+ A AR+FL+HQVR +VG LK VG G L  PD V   L A +  AA P AP  GLYL 
Sbjct: 191 IVIEAEARSFLHHQVRNMVGTLKLVGEG-LWAPDRVAAALAACDRRAAGPTAPPDGLYLT 249

Query: 379 KVKYD 365
            V YD
Sbjct: 250 GVGYD 254

[57][TOP]
>UniRef100_D0CXH5 tRNA pseudouridine synthase A n=1 Tax=Silicibacter lacuscaerulensis
           ITI-1157 RepID=D0CXH5_9RHOB
          Length = 255

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 30/61 (49%), Positives = 37/61 (60%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYDL 362
           RAR+FL++QVR  VG L+ VG G  T  DV   L A + AA  P+ P  GLYL +V Y  
Sbjct: 192 RARSFLHNQVRSFVGTLERVGAGAWTPQDVRDALEATDRAACGPVCPPQGLYLARVGYPD 251

Query: 361 P 359
           P
Sbjct: 252 P 252

[58][TOP]
>UniRef100_A6E3H1 Pseudouridylate synthase n=1 Tax=Roseovarius sp. TM1035
           RepID=A6E3H1_9RHOB
          Length = 258

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR +VG L+ VG G+    +V   LNA++ AA  P+ P  GLYL  V Y
Sbjct: 192 RARSFLHNQVRSIVGTLERVGAGSWHPDEVRAALNARDRAACGPVCPPHGLYLAGVSY 249

[59][TOP]
>UniRef100_A4U350 Pseudouridylate synthase n=1 Tax=Magnetospirillum gryphiswaldense
           RepID=A4U350_9PROT
          Length = 245

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 31/59 (52%), Positives = 37/59 (62%)
 Frame = -1

Query: 544 ARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           A AR+FL+HQVR +VG LK VG G      V+  L A++ AAA P AP  GLYL  V Y
Sbjct: 187 AEARSFLHHQVRNMVGTLKLVGEGKWHPDRVKAALEARDRAAAGPTAPPDGLYLTGVVY 245

[60][TOP]
>UniRef100_A3V9Z5 Pseudouridylate synthase n=1 Tax=Rhodobacterales bacterium HTCC2654
           RepID=A3V9Z5_9RHOB
          Length = 257

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR  VG L+ VG G+ +  DV   L A++ AA  P+ P  GLYL +V Y
Sbjct: 192 RARSFLHNQVRSFVGTLERVGAGSWSPDDVTAALEARDRAACGPVCPPDGLYLARVGY 249

[61][TOP]
>UniRef100_A3V313 Pseudouridylate synthase n=1 Tax=Loktanella vestfoldensis SKA53
           RepID=A3V313_9RHOB
          Length = 257

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 29/58 (50%), Positives = 37/58 (63%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR  VG L+ VG G     DV R L A++ AA  P+ P  GLYL  V+Y
Sbjct: 192 RARSFLHNQVRSFVGTLERVGAGAWQPGDVARALTARDRAACGPVCPPQGLYLAGVRY 249

[62][TOP]
>UniRef100_Q5LNR0 tRNA pseudouridine synthase A n=1 Tax=Ruegeria pomeroyi
           RepID=TRUA_SILPO
          Length = 262

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 29/61 (47%), Positives = 37/61 (60%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYDL 362
           RAR+FL++QVR  VG L+ VG G     DV   L A++ AA  P+ P  GLYL +V Y  
Sbjct: 192 RARSFLHNQVRSFVGTLERVGAGAWAPEDVRSALEARDRAACGPVCPPQGLYLARVGYPE 251

Query: 361 P 359
           P
Sbjct: 252 P 252

[63][TOP]
>UniRef100_B1ZGA6 tRNA pseudouridine synthase A n=1 Tax=Methylobacterium populi BJ001
           RepID=TRUA_METPB
          Length = 252

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/64 (43%), Positives = 35/64 (54%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           +V+   AR+FL+HQVR + G L   G   L+  DV  IL  K      P+APACGL    
Sbjct: 187 IVIATSARSFLHHQVRAMAGTLMLAGCRRLSADDVAEILATKAKHRCGPLAPACGLTFVG 246

Query: 376 VKYD 365
           V YD
Sbjct: 247 VDYD 250

[64][TOP]
>UniRef100_B1MVY3 tRNA pseudouridine synthase A n=1 Tax=Leuconostoc citreum KM20
           RepID=TRUA_LEUCK
          Length = 260

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 26/63 (41%), Positives = 39/63 (61%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           LV      AFLY+Q+R++VGVL  +G G   + D++R++  K+   A   APA GLYL +
Sbjct: 192 LVFVFEGNAFLYNQIRIMVGVLLEIGNGRREIHDIQRLIAVKDREQARFTAPASGLYLDE 251

Query: 376 VKY 368
           + Y
Sbjct: 252 IDY 254

[65][TOP]
>UniRef100_Q65P74 tRNA pseudouridine synthase A n=1 Tax=Bacillus licheniformis ATCC
           14580 RepID=TRUA_BACLD
          Length = 247

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/55 (50%), Positives = 37/55 (67%)
 Frame = -1

Query: 529 FLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYD 365
           FLY+ VR++ G L  VGTG  +  D+E+++ AKN  AA   APA GLYL +V YD
Sbjct: 192 FLYNMVRIIAGTLLDVGTGKFSPGDIEKMILAKNRDAAGRTAPAHGLYLWRVIYD 246

[66][TOP]
>UniRef100_Q3Z951 Pseudouridylate synthase n=1 Tax=Dehalococcoides ethenogenes 195
           RepID=Q3Z951_DEHE1
          Length = 248

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 27/66 (40%), Positives = 37/66 (56%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           L+    A +FL HQVR  +G L  +G G +++ + E +  AK    A P APACGL L +
Sbjct: 180 LIFNIEANSFLTHQVRNTIGTLVELGRGTMSMSEFEALFEAKTPGLAGPAAPACGLSLVR 239

Query: 376 VKYDLP 359
           V Y  P
Sbjct: 240 VNYREP 245

[67][TOP]
>UniRef100_C6AB91 Pseudouridylate synthase n=1 Tax=Bartonella grahamii as4aup
           RepID=C6AB91_BARGA
          Length = 247

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 28/59 (47%), Positives = 37/59 (62%)
 Frame = -1

Query: 544 ARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           A+AR+FL+HQ+R   G L  VG G  T  D+E  L+AK+      +AP  GLYL KV+Y
Sbjct: 189 AQARSFLHHQIRSFAGSLMEVGIGRWTAQDLEAALHAKDRKHCGVVAPPSGLYLTKVEY 247

[68][TOP]
>UniRef100_A9GBG1 Pseudouridylate synthase n=1 Tax=Phaeobacter gallaeciensis BS107
           RepID=A9GBG1_9RHOB
          Length = 257

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR  VG L+ VG G  +  DV+  L A++ AA  P+ P  GLYL +V Y
Sbjct: 192 RARSFLHNQVRSFVGTLERVGAGAWSPEDVKSALEAEDRAACGPVCPGHGLYLARVGY 249

[69][TOP]
>UniRef100_A9EX11 Pseudouridylate synthase n=1 Tax=Phaeobacter gallaeciensis 2.10
           RepID=A9EX11_9RHOB
          Length = 257

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR  VG L+ VG G  +  DV+  L A++ AA  P+ P  GLYL +V Y
Sbjct: 192 RARSFLHNQVRSFVGTLERVGAGAWSPEDVKSALEAEDRAACGPVCPGHGLYLARVGY 249

[70][TOP]
>UniRef100_D0D676 tRNA pseudouridine synthase A n=1 Tax=Citreicella sp. SE45
           RepID=D0D676_9RHOB
          Length = 255

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR +VG L+ VG G+    DV+  L A++ AA  P+ P  GLYL  V Y
Sbjct: 192 RARSFLHNQVRSIVGTLERVGAGSWAPEDVKHALEARDRAACGPVCPPDGLYLTGVGY 249

[71][TOP]
>UniRef100_C8W418 tRNA pseudouridine synthase A n=1 Tax=Desulfotomaculum acetoxidans
           DSM 771 RepID=C8W418_9FIRM
          Length = 250

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 26/65 (40%), Positives = 38/65 (58%)
 Frame = -1

Query: 562 RCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYL 383
           + L+ T R   FLYH VR++ G L  VGTG +   ++E IL   +  +A    PA GL+L
Sbjct: 186 KMLIFTFRGNGFLYHMVRIITGTLLQVGTGKIHYSEIETILKKCDRKSAGATVPALGLFL 245

Query: 382 GKVKY 368
            +V+Y
Sbjct: 246 ERVEY 250

[72][TOP]
>UniRef100_B6B8U3 Pseudouridylate synthase n=1 Tax=Rhodobacterales bacterium Y4I
           RepID=B6B8U3_9RHOB
          Length = 255

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR  VG L+ VG G     DV+  L A++ AA  P+ P  GLYL +V Y
Sbjct: 192 RARSFLHNQVRSFVGTLERVGAGAWDPADVKAALEARDRAACGPVCPGHGLYLARVGY 249

[73][TOP]
>UniRef100_B8IFQ2 tRNA pseudouridine synthase A n=1 Tax=Methylobacterium nodulans ORS
           2060 RepID=TRUA_METNO
          Length = 254

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 27/63 (42%), Positives = 39/63 (61%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           ++V   AR+FL+HQVR +VG L   G+G L    V  +L++++ A   P+APA GL L  
Sbjct: 183 ILVATSARSFLHHQVRGMVGTLMLAGSGRLDTAGVRAVLDSRDRARCGPLAPAAGLTLTG 242

Query: 376 VKY 368
           V Y
Sbjct: 243 VDY 245

[74][TOP]
>UniRef100_Q0BUB4 Pseudouridylate synthase n=1 Tax=Granulibacter bethesdensis CGDNIH1
           RepID=Q0BUB4_GRABC
          Length = 270

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 30/64 (46%), Positives = 38/64 (59%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           + + A AR+FL+HQVR +VG LK VG G  T   V   L A++ A A P AP  GL L  
Sbjct: 202 ITIIAEARSFLHHQVRNMVGTLKLVGDGRWTAEHVAAALAARDRAKAGPTAPPDGLALTG 261

Query: 376 VKYD 365
           V Y+
Sbjct: 262 VIYE 265

[75][TOP]
>UniRef100_B1ZVD8 Pseudouridylate synthase n=1 Tax=Opitutus terrae PB90-1
           RepID=B1ZVD8_OPITP
          Length = 268

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 32/65 (49%), Positives = 38/65 (58%)
 Frame = -1

Query: 562 RCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYL 383
           R + + A A  FLY  VR LVGVL AVG G LTV DV  IL ++   A    AP  GL+L
Sbjct: 187 RVIRIIAEADGFLYKMVRSLVGVLVAVGEGKLTVHDVRAILASRQRTAVVQTAPPQGLFL 246

Query: 382 GKVKY 368
            +V Y
Sbjct: 247 VRVFY 251

[76][TOP]
>UniRef100_C6PXK3 Pseudouridylate synthase n=1 Tax=Clostridium carboxidivorans P7
           RepID=C6PXK3_9CLOT
          Length = 247

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 26/54 (48%), Positives = 36/54 (66%)
 Frame = -1

Query: 529 FLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           FLY+ VR++VG L  VGT      D+++I+++KN + A   APACGL L KV Y
Sbjct: 194 FLYNMVRIIVGTLLDVGTNRFNPEDIDKIISSKNRSNAGKSAPACGLTLEKVFY 247

[77][TOP]
>UniRef100_A6FKA3 Pseudouridylate synthase n=1 Tax=Roseobacter sp. AzwK-3b
           RepID=A6FKA3_9RHOB
          Length = 255

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 28/57 (49%), Positives = 37/57 (64%)
 Frame = -1

Query: 538 ARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           AR+FL++QVR +VG L+ VG G+    DV+  L AK+ AA  P+ P  GLYL  V Y
Sbjct: 193 ARSFLHNQVRSIVGTLERVGAGSWAPEDVKTALEAKDRAACGPVCPPQGLYLAGVGY 249

[78][TOP]
>UniRef100_A4EN27 Pseudouridylate synthase n=1 Tax=Roseobacter sp. CCS2
           RepID=A4EN27_9RHOB
          Length = 255

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 29/58 (50%), Positives = 37/58 (63%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR  VG L+ VG    T  DV + L AK+ +A  P+ P  GLYL  VKY
Sbjct: 192 RARSFLHNQVRSFVGTLERVGAEAWTPDDVGKALAAKDRSACGPVCPPQGLYLAAVKY 249

[79][TOP]
>UniRef100_B1M6N9 tRNA pseudouridine synthase A n=1 Tax=Methylobacterium
           radiotolerans JCM 2831 RepID=TRUA_METRJ
          Length = 253

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 29/67 (43%), Positives = 37/67 (55%)
 Frame = -1

Query: 565 HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLY 386
           H  +VV   AR+FL+HQVR +VG L   G   L   DV  IL + + +   P+APA GL 
Sbjct: 184 HDEIVVATAARSFLHHQVRAMVGTLMLAGCRRLAADDVAEILASGDKSRCGPLAPAAGLT 243

Query: 385 LGKVKYD 365
              V YD
Sbjct: 244 FVGVDYD 250

[80][TOP]
>UniRef100_Q0ASJ7 tRNA pseudouridine synthase A n=1 Tax=Maricaulis maris MCS10
           RepID=TRUA_MARMM
          Length = 249

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 29/65 (44%), Positives = 40/65 (61%)
 Frame = -1

Query: 550 VTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVK 371
           +T  AR+FL+ QVR +VG L  VG G  +  D +R L+A + +   P+APA GLYL  V 
Sbjct: 185 LTCSARSFLHRQVRSMVGSLVEVGVGKWSARDFKRALDAADRSRCGPVAPADGLYLTAVD 244

Query: 370 YDLPS 356
           Y  P+
Sbjct: 245 YPGPA 249

[81][TOP]
>UniRef100_Q3ZZP4 Pseudouridylate synthase n=1 Tax=Dehalococcoides sp. CBDB1
           RepID=Q3ZZP4_DEHSC
          Length = 246

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 27/66 (40%), Positives = 38/66 (57%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           L++   A +FL HQVR  +GVL  +G G +++ +   +  AK    A P APACGL L +
Sbjct: 178 LILRIEANSFLTHQVRNTIGVLVELGRGTISMGEFGALFEAKTPGLAGPAAPACGLSLVR 237

Query: 376 VKYDLP 359
           V Y  P
Sbjct: 238 VNYREP 243

[82][TOP]
>UniRef100_A5FRV7 Pseudouridylate synthase n=1 Tax=Dehalococcoides sp. BAV1
           RepID=A5FRV7_DEHSB
          Length = 246

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 27/66 (40%), Positives = 38/66 (57%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           L++   A +FL HQVR  +GVL  +G G +++ +   +  AK    A P APACGL L +
Sbjct: 178 LILRIEANSFLTHQVRNTIGVLVELGRGTISMGEFGALFEAKTPGLAGPAAPACGLSLVR 237

Query: 376 VKYDLP 359
           V Y  P
Sbjct: 238 VNYREP 243

[83][TOP]
>UniRef100_A4AVW0 Pseudouridylate synthase n=1 Tax=Flavobacteriales bacterium
           HTCC2170 RepID=A4AVW0_9FLAO
          Length = 224

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 29/63 (46%), Positives = 39/63 (61%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           LV T  A  FL + VR +VG L  VGTG  ++ D++RIL +K+   A    PA GLYL K
Sbjct: 154 LVFTIVADRFLRNMVRAVVGTLIDVGTGKTSLADIQRILESKDRTKAGASVPAKGLYLTK 213

Query: 376 VKY 368
           ++Y
Sbjct: 214 IEY 216

[84][TOP]
>UniRef100_Q2RNZ9 tRNA pseudouridine synthase A n=1 Tax=Rhodospirillum rubrum ATCC
           11170 RepID=TRUA_RHORT
          Length = 278

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 29/61 (47%), Positives = 38/61 (62%)
 Frame = -1

Query: 550 VTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVK 371
           V ARAR+FL+HQVR +VG L  VG G  T   +   L A + +AA P AP  GLY  +V+
Sbjct: 185 VFARARSFLHHQVRNMVGTLALVGDGRWTADRLRAALEACDRSAAGPTAPPDGLYFLRVR 244

Query: 370 Y 368
           +
Sbjct: 245 F 245

[85][TOP]
>UniRef100_UPI0001905D6D tRNA pseudouridine synthase A n=1 Tax=Rhizobium etli IE4771
           RepID=UPI0001905D6D
          Length = 244

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 27/61 (44%), Positives = 36/61 (59%)
 Frame = -1

Query: 550 VTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVK 371
           + A A++FL++Q+R   G LK  G G  T  DVE  L A+N  A  P+AP  GLY  +V 
Sbjct: 165 IRATAQSFLHNQIRSFAGTLKLAGEGKWTPDDVEAALEARNRKACGPVAPPDGLYFLQVD 224

Query: 370 Y 368
           Y
Sbjct: 225 Y 225

[86][TOP]
>UniRef100_UPI0001903B78 tRNA pseudouridine synthase A n=1 Tax=Rhizobium etli Kim 5
           RepID=UPI0001903B78
          Length = 141

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 27/61 (44%), Positives = 36/61 (59%)
 Frame = -1

Query: 550 VTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVK 371
           + A A++FL++Q+R   G LK  G G  T  DVE  L A+N  A  P+AP  GLY  +V 
Sbjct: 60  IRATAQSFLHNQIRSFAGTLKLAGEGKWTPDDVEAALEARNRKACGPVAPPDGLYFLQVD 119

Query: 370 Y 368
           Y
Sbjct: 120 Y 120

[87][TOP]
>UniRef100_UPI00003849ED COG0101: Pseudouridylate synthase n=1 Tax=Magnetospirillum
           magnetotacticum MS-1 RepID=UPI00003849ED
          Length = 256

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 29/61 (47%), Positives = 36/61 (59%)
 Frame = -1

Query: 550 VTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVK 371
           + A AR+FL+HQVR +VG LK VG G  +  D+ R L A +     P APA GL L  V 
Sbjct: 185 IIAEARSFLHHQVRNMVGTLKLVGEGKWSPDDMARALAACDRTKGGPTAPAAGLCLTGVS 244

Query: 370 Y 368
           Y
Sbjct: 245 Y 245

[88][TOP]
>UniRef100_Q0FQS7 Pseudouridylate synthase n=1 Tax=Roseovarius sp. HTCC2601
           RepID=Q0FQS7_9RHOB
          Length = 255

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR +VG L+ VG G+    DV   L A++ AA  P+ P  GLYL  V Y
Sbjct: 192 RARSFLHNQVRSIVGTLERVGAGSWAPEDVRSALEARDRAACGPVCPPDGLYLMGVGY 249

[89][TOP]
>UniRef100_B7C9S2 Pseudouridylate synthase n=1 Tax=Eubacterium biforme DSM 3989
           RepID=B7C9S2_9FIRM
          Length = 247

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 27/55 (49%), Positives = 39/55 (70%)
 Frame = -1

Query: 529 FLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYD 365
           FL +QVR++ G L AVG   + V DV+R+L+AK+ +A    A +CGLYL +VKY+
Sbjct: 190 FLRYQVRMMTGTLIAVGQHKIGVDDVQRMLDAKDKSACRYNASSCGLYLVEVKYN 244

[90][TOP]
>UniRef100_Q3J0D9 tRNA pseudouridine synthase A n=1 Tax=Rhodobacter sphaeroides 2.4.1
           RepID=TRUA_RHOS4
          Length = 255

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = -1

Query: 541 RARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKY 368
           RAR+FL++QVR +VG L+ VG G  T   V   L+A++ AA  P++P  GLYL  V Y
Sbjct: 192 RARSFLHNQVRSIVGTLERVGAGAWTPDQVREALDARDRAACGPVSPPQGLYLTGVGY 249

[91][TOP]
>UniRef100_B0UP40 tRNA pseudouridine synthase A n=1 Tax=Methylobacterium sp. 4-46
           RepID=TRUA_METS4
          Length = 250

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 27/66 (40%), Positives = 38/66 (57%)
 Frame = -1

Query: 556 LVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGK 377
           ++V   AR+FL+HQVR +VG L   G G L    V  +L++++     P+APA GL L  
Sbjct: 183 ILVATSARSFLHHQVRGMVGTLMLAGCGRLDAAGVRAVLDSRDRTRCGPLAPAAGLTLTG 242

Query: 376 VKYDLP 359
           V Y  P
Sbjct: 243 VDYPEP 248

[92][TOP]
>UniRef100_A9WH95 tRNA pseudouridine synthase A n=2 Tax=Chloroflexus RepID=TRUA_CHLAA
          Length = 278

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 28/65 (43%), Positives = 37/65 (56%)
 Frame = -1

Query: 562 RCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYL 383
           R L +   A AFL H VR++VG L  VG G +TV     +L +++   A P APA GL L
Sbjct: 184 RLLAIEVAANAFLQHMVRMIVGTLLLVGRGRMTVDQFGEVLASRDRRLAGPTAPAHGLTL 243

Query: 382 GKVKY 368
             V+Y
Sbjct: 244 TAVRY 248

[93][TOP]
>UniRef100_B0T1S6 tRNA pseudouridine synthase A n=1 Tax=Caulobacter sp. K31
           RepID=TRUA_CAUSK
          Length = 249

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 28/58 (48%), Positives = 35/58 (60%)
 Frame = -1

Query: 538 ARAFLYHQVRLLVGVLKAVGTGNLTVPDVERILNAKNVAAASPMAPACGLYLGKVKYD 365
           AR+FL+ QVR + G L  VG G  T  DV   L A++  A  P+APA GLYL  V Y+
Sbjct: 189 ARSFLHRQVRSMTGTLAEVGVGRWTADDVMAALEARDRTACGPVAPADGLYLTGVGYE 246